ORF_ID e_value Gene_name EC_number CAZy COGs Description
PAKCMHMK_00001 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAKCMHMK_00002 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAKCMHMK_00003 7.1e-201 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAKCMHMK_00004 4.2e-83 S Protein of unknown function (DUF721)
PAKCMHMK_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKCMHMK_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKCMHMK_00007 3.2e-50 S Transmembrane domain of unknown function (DUF3566)
PAKCMHMK_00008 1.7e-182 lacR K Transcriptional regulator, LacI family
PAKCMHMK_00009 1.3e-15 lacS G Psort location CytoplasmicMembrane, score 10.00
PAKCMHMK_00010 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PAKCMHMK_00011 1.1e-206 V VanZ like family
PAKCMHMK_00013 4.3e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PAKCMHMK_00014 2.5e-194 S Psort location CytoplasmicMembrane, score
PAKCMHMK_00017 1.1e-121 S Protein of unknown function DUF45
PAKCMHMK_00019 1.4e-256 S Domain of unknown function (DUF4143)
PAKCMHMK_00020 3.3e-83 dps P Belongs to the Dps family
PAKCMHMK_00021 7.2e-117 L Transposase and inactivated derivatives IS30 family
PAKCMHMK_00022 1.1e-88 amyE G Bacterial extracellular solute-binding protein
PAKCMHMK_00023 1e-114 S Protein of unknown function, DUF624
PAKCMHMK_00024 3.8e-201 K Periplasmic binding protein domain
PAKCMHMK_00025 2.1e-292 3.2.1.26 GH32 G Glycosyl hydrolases family 32
PAKCMHMK_00026 5.9e-252 amyE G Bacterial extracellular solute-binding protein
PAKCMHMK_00027 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PAKCMHMK_00028 3e-187 K Psort location Cytoplasmic, score
PAKCMHMK_00029 2.3e-209 L Transposase and inactivated derivatives IS30 family
PAKCMHMK_00030 1e-147 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PAKCMHMK_00031 4.1e-52 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PAKCMHMK_00032 2e-74 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PAKCMHMK_00033 5.8e-152 rafG G ABC transporter permease
PAKCMHMK_00034 4.2e-150 malC G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00035 1.5e-30 K Psort location Cytoplasmic, score
PAKCMHMK_00036 6.9e-72 K Psort location Cytoplasmic, score
PAKCMHMK_00037 2e-76 amyE G Bacterial extracellular solute-binding protein
PAKCMHMK_00038 4.8e-116 amyE G Bacterial extracellular solute-binding protein
PAKCMHMK_00040 5.9e-229 M Protein of unknown function (DUF2961)
PAKCMHMK_00041 3e-254 amyE G Bacterial extracellular solute-binding protein
PAKCMHMK_00042 3.4e-186 K Periplasmic binding protein-like domain
PAKCMHMK_00043 1.3e-265 amyE G Bacterial extracellular solute-binding protein
PAKCMHMK_00044 2.1e-82 dps P Belongs to the Dps family
PAKCMHMK_00045 2.9e-230 ytfL P Transporter associated domain
PAKCMHMK_00046 3.5e-208 S AAA ATPase domain
PAKCMHMK_00047 2.5e-121 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PAKCMHMK_00048 1e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
PAKCMHMK_00049 0.0 trxB2 1.8.1.9 C Thioredoxin domain
PAKCMHMK_00050 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
PAKCMHMK_00051 5.7e-161
PAKCMHMK_00052 3e-94 S Uncharacterised protein conserved in bacteria (DUF2194)
PAKCMHMK_00053 3.9e-207 S Uncharacterised protein conserved in bacteria (DUF2194)
PAKCMHMK_00054 2.2e-281 pelF GT4 M Domain of unknown function (DUF3492)
PAKCMHMK_00055 1.7e-282 pelG S Putative exopolysaccharide Exporter (EPS-E)
PAKCMHMK_00056 0.0 cotH M CotH kinase protein
PAKCMHMK_00057 4.1e-158 P VTC domain
PAKCMHMK_00058 3.2e-110 S Domain of unknown function (DUF4956)
PAKCMHMK_00059 0.0 yliE T Putative diguanylate phosphodiesterase
PAKCMHMK_00060 7.1e-95 S AAA domain
PAKCMHMK_00061 3.4e-310 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PAKCMHMK_00063 2.6e-25 trxB1 1.8.1.9 C Thioredoxin domain
PAKCMHMK_00064 7e-123 araQ G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00065 8.2e-104 ugpA_1 P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00066 7.9e-204 G Bacterial extracellular solute-binding protein
PAKCMHMK_00067 9.3e-79 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 T Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
PAKCMHMK_00068 4.1e-73 oppF3 P Belongs to the ABC transporter superfamily
PAKCMHMK_00070 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PAKCMHMK_00071 0.0 yjjP S Threonine/Serine exporter, ThrE
PAKCMHMK_00072 2.8e-299 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAKCMHMK_00073 1.3e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PAKCMHMK_00074 1.2e-302 S Amidohydrolase family
PAKCMHMK_00075 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKCMHMK_00076 2.3e-39 S Protein of unknown function (DUF3073)
PAKCMHMK_00077 1.6e-11 I Sterol carrier protein
PAKCMHMK_00078 3.7e-102 I Sterol carrier protein
PAKCMHMK_00079 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PAKCMHMK_00080 2.6e-35
PAKCMHMK_00081 9.4e-122 gluP 3.4.21.105 S Rhomboid family
PAKCMHMK_00082 2.6e-69 crgA D Involved in cell division
PAKCMHMK_00083 1.8e-118 S Bacterial protein of unknown function (DUF881)
PAKCMHMK_00084 1.1e-228 srtA 3.4.22.70 M Sortase family
PAKCMHMK_00085 2e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
PAKCMHMK_00086 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
PAKCMHMK_00087 2.6e-172 T Protein tyrosine kinase
PAKCMHMK_00088 7e-262 pbpA M penicillin-binding protein
PAKCMHMK_00089 5.8e-278 rodA D Belongs to the SEDS family
PAKCMHMK_00090 6.3e-272 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
PAKCMHMK_00091 3e-74 fhaB T Inner membrane component of T3SS, cytoplasmic domain
PAKCMHMK_00092 2e-129 fhaA T Protein of unknown function (DUF2662)
PAKCMHMK_00093 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
PAKCMHMK_00094 2.5e-212 pldB 3.1.1.5 I Serine aminopeptidase, S33
PAKCMHMK_00095 1.3e-87 hsp20 O Hsp20/alpha crystallin family
PAKCMHMK_00096 4.2e-178 yddG EG EamA-like transporter family
PAKCMHMK_00097 3.7e-21
PAKCMHMK_00098 1.2e-255 S Putative esterase
PAKCMHMK_00099 0.0 lysX S Uncharacterised conserved protein (DUF2156)
PAKCMHMK_00100 9e-200 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAKCMHMK_00101 5.7e-132 S Pyridoxamine 5'-phosphate oxidase
PAKCMHMK_00102 5.2e-198 S Fic/DOC family
PAKCMHMK_00103 4.1e-163 M Glycosyltransferase like family 2
PAKCMHMK_00104 1.4e-305 KL Domain of unknown function (DUF3427)
PAKCMHMK_00105 0.0 KL Domain of unknown function (DUF3427)
PAKCMHMK_00106 1.8e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PAKCMHMK_00107 3.5e-52 ybjQ S Putative heavy-metal-binding
PAKCMHMK_00108 5.3e-145 yplQ S Haemolysin-III related
PAKCMHMK_00110 1.3e-262 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAKCMHMK_00111 4.1e-262 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
PAKCMHMK_00112 0.0 cadA P E1-E2 ATPase
PAKCMHMK_00113 1.8e-278 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
PAKCMHMK_00114 1.5e-172 htpX O Belongs to the peptidase M48B family
PAKCMHMK_00116 1.4e-148 yicL EG EamA-like transporter family
PAKCMHMK_00117 6.1e-199 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PAKCMHMK_00118 3.1e-245 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAKCMHMK_00119 4.1e-281 clcA P Voltage gated chloride channel
PAKCMHMK_00120 2.2e-148 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKCMHMK_00121 8.7e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKCMHMK_00122 2.1e-202 K helix_turn _helix lactose operon repressor
PAKCMHMK_00124 3e-300 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
PAKCMHMK_00125 5e-277 scrT G Transporter major facilitator family protein
PAKCMHMK_00126 3.1e-179 K helix_turn _helix lactose operon repressor
PAKCMHMK_00127 1.4e-251 yhjE EGP Sugar (and other) transporter
PAKCMHMK_00128 1.5e-202 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PAKCMHMK_00129 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PAKCMHMK_00130 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PAKCMHMK_00131 5.8e-186 K Psort location Cytoplasmic, score
PAKCMHMK_00132 0.0 M cell wall anchor domain protein
PAKCMHMK_00133 0.0 M domain protein
PAKCMHMK_00134 3.6e-174 3.4.22.70 M Sortase family
PAKCMHMK_00135 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PAKCMHMK_00136 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
PAKCMHMK_00137 6.8e-234 malE G Bacterial extracellular solute-binding protein
PAKCMHMK_00138 5.1e-254 malF G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00139 1.4e-162 malG G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00140 1.9e-144 traX S TraX protein
PAKCMHMK_00141 4.8e-44 K Psort location Cytoplasmic, score
PAKCMHMK_00142 3.2e-117 K Psort location Cytoplasmic, score
PAKCMHMK_00143 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
PAKCMHMK_00144 0.0 dnaK O Heat shock 70 kDa protein
PAKCMHMK_00145 1e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAKCMHMK_00146 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
PAKCMHMK_00147 1.2e-103 hspR K transcriptional regulator, MerR family
PAKCMHMK_00148 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
PAKCMHMK_00149 5.1e-115 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
PAKCMHMK_00150 2.5e-141 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PAKCMHMK_00151 5.7e-126 S HAD hydrolase, family IA, variant 3
PAKCMHMK_00152 2.1e-134 dedA S SNARE associated Golgi protein
PAKCMHMK_00153 5.8e-125 cpaE D bacterial-type flagellum organization
PAKCMHMK_00154 5.9e-191 cpaF U Type II IV secretion system protein
PAKCMHMK_00155 4.4e-74 U Type ii secretion system
PAKCMHMK_00156 2.6e-115 gspF NU Type II secretion system (T2SS), protein F
PAKCMHMK_00157 1.1e-41 S Protein of unknown function (DUF4244)
PAKCMHMK_00158 1.4e-57 U TadE-like protein
PAKCMHMK_00159 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
PAKCMHMK_00160 1.2e-216 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
PAKCMHMK_00161 6.5e-97 K Bacterial regulatory proteins, tetR family
PAKCMHMK_00162 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
PAKCMHMK_00163 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAKCMHMK_00164 2.5e-110 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
PAKCMHMK_00165 2.8e-114 K WHG domain
PAKCMHMK_00166 0.0 H Beta-ketoacyl synthase, C-terminal domain
PAKCMHMK_00167 0.0 1.3.3.6, 2.3.1.39 IQ [acyl-carrier-protein] S-malonyltransferase activity
PAKCMHMK_00168 1.2e-264 EGP Major Facilitator Superfamily
PAKCMHMK_00169 4.2e-99
PAKCMHMK_00170 6.8e-306 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PAKCMHMK_00171 1.2e-79 XK27_10430 S NAD(P)H-binding
PAKCMHMK_00172 2e-55 ydeP K HxlR-like helix-turn-helix
PAKCMHMK_00173 2.5e-134 yoaK S Protein of unknown function (DUF1275)
PAKCMHMK_00174 4.7e-69
PAKCMHMK_00177 1e-292 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAKCMHMK_00179 2.2e-153 S Protein of unknown function (DUF805)
PAKCMHMK_00180 4.1e-228 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PAKCMHMK_00181 6.3e-118
PAKCMHMK_00182 6.4e-122 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
PAKCMHMK_00183 2.2e-247 EGP Major facilitator Superfamily
PAKCMHMK_00184 8.4e-96 S GtrA-like protein
PAKCMHMK_00185 3.3e-61 S Macrophage migration inhibitory factor (MIF)
PAKCMHMK_00186 1.8e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
PAKCMHMK_00187 0.0 pepD E Peptidase family C69
PAKCMHMK_00188 2.5e-106 S Phosphatidylethanolamine-binding protein
PAKCMHMK_00189 3e-19 D nuclear chromosome segregation
PAKCMHMK_00190 6.5e-31 3.4.17.14 M domain, Protein
PAKCMHMK_00191 7.8e-294 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAKCMHMK_00193 9.5e-37 ptsH G PTS HPr component phosphorylation site
PAKCMHMK_00194 2.3e-105 K helix_turn _helix lactose operon repressor
PAKCMHMK_00195 7.8e-208 holB 2.7.7.7 L DNA polymerase III
PAKCMHMK_00196 1.6e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAKCMHMK_00197 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAKCMHMK_00198 3.7e-170 3.6.1.27 I PAP2 superfamily
PAKCMHMK_00199 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PAKCMHMK_00200 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PAKCMHMK_00201 2.8e-271 S Calcineurin-like phosphoesterase
PAKCMHMK_00202 9e-153 K FCD
PAKCMHMK_00203 1.4e-242 P Domain of unknown function (DUF4143)
PAKCMHMK_00204 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
PAKCMHMK_00206 3.2e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAKCMHMK_00207 1.8e-178 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PAKCMHMK_00208 1.7e-148 oppF E ATPases associated with a variety of cellular activities
PAKCMHMK_00209 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
PAKCMHMK_00210 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00211 7.9e-304 E Bacterial extracellular solute-binding proteins, family 5 Middle
PAKCMHMK_00212 3.3e-160 3.5.1.106 I carboxylic ester hydrolase activity
PAKCMHMK_00213 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PAKCMHMK_00214 5.6e-170 2.7.1.2 GK ROK family
PAKCMHMK_00215 9.9e-174 L Domain of unknown function (DUF4862)
PAKCMHMK_00216 9.6e-112
PAKCMHMK_00217 2.9e-212 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAKCMHMK_00218 5.1e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
PAKCMHMK_00219 1.1e-133 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PAKCMHMK_00220 3.6e-193 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PAKCMHMK_00221 4.8e-69 V Abi-like protein
PAKCMHMK_00222 1.5e-196 3.4.22.70 M Sortase family
PAKCMHMK_00223 2.6e-91
PAKCMHMK_00224 2e-166
PAKCMHMK_00225 2.1e-151 L HNH endonuclease
PAKCMHMK_00227 6.2e-46 L Transposase
PAKCMHMK_00228 9.6e-136 tnp7109-21 L Integrase core domain
PAKCMHMK_00229 1.7e-173 S Domain of unknown function (DUF4928)
PAKCMHMK_00230 6.7e-231 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PAKCMHMK_00231 9.3e-283 S FRG domain
PAKCMHMK_00232 0.0 T AAA domain
PAKCMHMK_00233 1.8e-27
PAKCMHMK_00234 4.1e-282 L Phage integrase, N-terminal SAM-like domain
PAKCMHMK_00236 0.0 efeU_1 P Iron permease FTR1 family
PAKCMHMK_00237 1.6e-99 tpd P Fe2+ transport protein
PAKCMHMK_00238 1.7e-232 S Predicted membrane protein (DUF2318)
PAKCMHMK_00239 7e-221 macB_2 V ABC transporter permease
PAKCMHMK_00240 6.1e-199 Z012_06715 V FtsX-like permease family
PAKCMHMK_00241 1.7e-145 macB V ABC transporter, ATP-binding protein
PAKCMHMK_00242 1.7e-67 S FMN_bind
PAKCMHMK_00243 3.2e-101 K Psort location Cytoplasmic, score 8.87
PAKCMHMK_00244 1.8e-306 pip S YhgE Pip domain protein
PAKCMHMK_00245 0.0 pip S YhgE Pip domain protein
PAKCMHMK_00246 2.5e-253 S Putative ABC-transporter type IV
PAKCMHMK_00247 1.5e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAKCMHMK_00248 2e-136 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PAKCMHMK_00249 3.7e-193 opcA G Glucose-6-phosphate dehydrogenase subunit
PAKCMHMK_00250 1.3e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAKCMHMK_00251 6.3e-292 3.5.2.6 V Beta-lactamase enzyme family
PAKCMHMK_00253 1.1e-302 pepD E Peptidase family C69
PAKCMHMK_00254 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
PAKCMHMK_00255 1e-151 icaR K Bacterial regulatory proteins, tetR family
PAKCMHMK_00256 2.2e-171 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAKCMHMK_00257 1e-227 amt U Ammonium Transporter Family
PAKCMHMK_00258 1e-54 glnB K Nitrogen regulatory protein P-II
PAKCMHMK_00259 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
PAKCMHMK_00260 3e-238 dinF V MatE
PAKCMHMK_00261 1.3e-252 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PAKCMHMK_00262 1.9e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
PAKCMHMK_00263 2.7e-140 cobQ S CobB/CobQ-like glutamine amidotransferase domain
PAKCMHMK_00264 5.5e-38 S granule-associated protein
PAKCMHMK_00265 0.0 ubiB S ABC1 family
PAKCMHMK_00266 3.3e-269 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
PAKCMHMK_00267 2.2e-154 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PAKCMHMK_00268 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKCMHMK_00269 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
PAKCMHMK_00270 6.8e-76 ssb1 L Single-stranded DNA-binding protein
PAKCMHMK_00271 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAKCMHMK_00272 8.6e-70 rplI J Binds to the 23S rRNA
PAKCMHMK_00275 8.9e-159 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
PAKCMHMK_00276 1.9e-116
PAKCMHMK_00277 3.1e-130 V ABC transporter
PAKCMHMK_00278 3.7e-111 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAKCMHMK_00279 6.5e-210 2.7.13.3 T Histidine kinase
PAKCMHMK_00280 1.8e-20 L Transposase
PAKCMHMK_00281 6e-189 EGP Major Facilitator Superfamily
PAKCMHMK_00282 6.2e-43
PAKCMHMK_00283 8.6e-60
PAKCMHMK_00284 1e-127 xerH L Belongs to the 'phage' integrase family
PAKCMHMK_00285 1.9e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PAKCMHMK_00286 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
PAKCMHMK_00287 3.3e-43 csoR S Metal-sensitive transcriptional repressor
PAKCMHMK_00288 1.6e-210 rmuC S RmuC family
PAKCMHMK_00289 4.1e-110 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAKCMHMK_00290 6.9e-170 spoU 2.1.1.185 J RNA methyltransferase TrmH family
PAKCMHMK_00291 6.4e-168 V ABC transporter
PAKCMHMK_00292 3.1e-179
PAKCMHMK_00293 2.5e-160 K Psort location Cytoplasmic, score
PAKCMHMK_00294 4.1e-51 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKCMHMK_00295 1.9e-286 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAKCMHMK_00296 8.1e-282 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKCMHMK_00297 1.2e-194 2.3.1.57 J Acetyltransferase (GNAT) domain
PAKCMHMK_00298 3.3e-52 S Protein of unknown function (DUF2469)
PAKCMHMK_00299 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
PAKCMHMK_00300 2.7e-293 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAKCMHMK_00302 1.9e-37 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
PAKCMHMK_00303 1.4e-142 L Transposase
PAKCMHMK_00304 5.1e-50 K helix_turn_helix, arabinose operon control protein
PAKCMHMK_00305 2.6e-154 araN G Bacterial extracellular solute-binding protein
PAKCMHMK_00306 9.5e-121 lacF P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00307 1.3e-114 araQ U Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00308 2.1e-130 rafA 3.2.1.22 G alpha-galactosidase
PAKCMHMK_00309 1e-63 tyrA 5.4.99.5 E Chorismate mutase type II
PAKCMHMK_00310 0.0 S domain protein
PAKCMHMK_00311 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAKCMHMK_00312 1e-279 E Bacterial extracellular solute-binding proteins, family 5 Middle
PAKCMHMK_00313 1.9e-126 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAKCMHMK_00314 4e-139 KT Transcriptional regulatory protein, C terminal
PAKCMHMK_00315 4.6e-118
PAKCMHMK_00316 1.3e-97 mntP P Probably functions as a manganese efflux pump
PAKCMHMK_00317 4e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PAKCMHMK_00318 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PAKCMHMK_00319 0.0 K RNA polymerase II activating transcription factor binding
PAKCMHMK_00320 2.8e-98 L Phage integrase family
PAKCMHMK_00322 4e-11 xhlB S SPP1 phage holin
PAKCMHMK_00323 6e-75 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
PAKCMHMK_00324 1.9e-23
PAKCMHMK_00327 5.9e-119 E phage tail tape measure protein
PAKCMHMK_00328 1.5e-09
PAKCMHMK_00329 1.1e-43
PAKCMHMK_00330 3.5e-57
PAKCMHMK_00331 5.9e-40
PAKCMHMK_00332 4e-40
PAKCMHMK_00333 6.2e-240 S Caudovirus prohead serine protease
PAKCMHMK_00334 3.3e-171 S Phage portal protein
PAKCMHMK_00335 6.3e-231 S Terminase
PAKCMHMK_00336 4.5e-09
PAKCMHMK_00337 1.6e-63 L HNH endonuclease
PAKCMHMK_00338 2.2e-22
PAKCMHMK_00339 8.7e-40
PAKCMHMK_00345 1.6e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PAKCMHMK_00346 6.4e-148 atpB C it plays a direct role in the translocation of protons across the membrane
PAKCMHMK_00347 4.4e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKCMHMK_00348 1.4e-63 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAKCMHMK_00349 1.1e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKCMHMK_00350 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAKCMHMK_00351 5.5e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAKCMHMK_00352 6.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAKCMHMK_00353 3.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PAKCMHMK_00354 1.4e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PAKCMHMK_00355 1.2e-158 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
PAKCMHMK_00356 4.8e-187
PAKCMHMK_00357 8.7e-179
PAKCMHMK_00358 2.2e-171 trxA2 O Tetratricopeptide repeat
PAKCMHMK_00359 6.9e-118 cyaA 4.6.1.1 S CYTH
PAKCMHMK_00362 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
PAKCMHMK_00363 8.8e-189 plsC2 2.3.1.51 I Phosphate acyltransferases
PAKCMHMK_00364 2.7e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PAKCMHMK_00365 2.8e-229 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PAKCMHMK_00366 9.9e-219 P Bacterial extracellular solute-binding protein
PAKCMHMK_00367 2.9e-160 U Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00368 6.9e-151 U Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00369 8.2e-238 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAKCMHMK_00370 2e-186 S CAAX protease self-immunity
PAKCMHMK_00371 1.9e-136 M Mechanosensitive ion channel
PAKCMHMK_00372 5e-273 aspA 4.3.1.1 E Fumarase C C-terminus
PAKCMHMK_00373 9.3e-11 L Transposase DDE domain
PAKCMHMK_00374 5.7e-133 S Sulfite exporter TauE/SafE
PAKCMHMK_00375 2.8e-262 aslB C Iron-sulfur cluster-binding domain
PAKCMHMK_00376 3.8e-193 K helix_turn _helix lactose operon repressor
PAKCMHMK_00377 2.1e-306 Z012_09690 P Domain of unknown function (DUF4976)
PAKCMHMK_00378 1.2e-263 G Bacterial extracellular solute-binding protein
PAKCMHMK_00379 2.9e-165 malC P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00380 1.6e-177 P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00381 2.2e-237 S AAA domain
PAKCMHMK_00382 3e-41 L Transposase, Mutator family
PAKCMHMK_00383 1.3e-106 K Bacterial regulatory proteins, tetR family
PAKCMHMK_00384 1.9e-258 MA20_36090 S Psort location Cytoplasmic, score 8.87
PAKCMHMK_00385 1.2e-85 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAKCMHMK_00386 2e-80 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAKCMHMK_00387 3.3e-71 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
PAKCMHMK_00388 4.4e-17 P Sodium/hydrogen exchanger family
PAKCMHMK_00390 1.2e-79
PAKCMHMK_00391 0.0 Q von Willebrand factor (vWF) type A domain
PAKCMHMK_00392 4.3e-278 M LPXTG cell wall anchor motif
PAKCMHMK_00394 3.2e-86
PAKCMHMK_00395 1.7e-109
PAKCMHMK_00396 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAKCMHMK_00397 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PAKCMHMK_00398 4.2e-119 V ABC transporter, ATP-binding protein
PAKCMHMK_00399 1.1e-31 macB_7 V FtsX-like permease family
PAKCMHMK_00400 1.3e-89 lemA S LemA family
PAKCMHMK_00401 0.0 S Predicted membrane protein (DUF2207)
PAKCMHMK_00402 1.9e-10 S Predicted membrane protein (DUF2207)
PAKCMHMK_00403 3e-49 S Predicted membrane protein (DUF2207)
PAKCMHMK_00404 3e-43 S Predicted membrane protein (DUF2207)
PAKCMHMK_00405 6.4e-57 S Predicted membrane protein (DUF2207)
PAKCMHMK_00406 3.1e-20
PAKCMHMK_00407 2.4e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
PAKCMHMK_00408 2.5e-200 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PAKCMHMK_00409 2.2e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAKCMHMK_00410 1e-34 CP_0960 S Belongs to the UPF0109 family
PAKCMHMK_00411 7e-62 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PAKCMHMK_00412 5.8e-215 S Endonuclease/Exonuclease/phosphatase family
PAKCMHMK_00413 2e-265 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAKCMHMK_00414 1.5e-161 P Cation efflux family
PAKCMHMK_00415 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKCMHMK_00416 2e-136 guaA1 6.3.5.2 F Peptidase C26
PAKCMHMK_00418 1.8e-112
PAKCMHMK_00419 6.4e-103 dam 2.1.1.72 H D12 class N6 adenine-specific DNA methyltransferase
PAKCMHMK_00420 0.0 yjjK S ABC transporter
PAKCMHMK_00421 3.9e-72 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
PAKCMHMK_00422 3.9e-44 stbC S Plasmid stability protein
PAKCMHMK_00423 4e-93 ilvN 2.2.1.6 E ACT domain
PAKCMHMK_00424 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
PAKCMHMK_00425 2.4e-133 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAKCMHMK_00426 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PAKCMHMK_00427 1.5e-115 yceD S Uncharacterized ACR, COG1399
PAKCMHMK_00428 7.9e-87
PAKCMHMK_00429 6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAKCMHMK_00430 2.4e-49 S Protein of unknown function (DUF3039)
PAKCMHMK_00431 2.3e-195 yghZ C Aldo/keto reductase family
PAKCMHMK_00432 2.4e-77 soxR K MerR, DNA binding
PAKCMHMK_00433 4.5e-117
PAKCMHMK_00434 1.4e-248 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAKCMHMK_00435 7e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PAKCMHMK_00436 1.2e-124 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAKCMHMK_00437 1.4e-176 S Auxin Efflux Carrier
PAKCMHMK_00440 0.0 pgi 5.3.1.9 G Belongs to the GPI family
PAKCMHMK_00441 1.5e-264 abcT3 P ATPases associated with a variety of cellular activities
PAKCMHMK_00442 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00443 1.4e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAKCMHMK_00444 4.7e-163 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PAKCMHMK_00445 2.9e-159 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKCMHMK_00446 4.3e-211 K helix_turn _helix lactose operon repressor
PAKCMHMK_00447 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PAKCMHMK_00448 1.1e-40 araE EGP Major facilitator Superfamily
PAKCMHMK_00449 6.5e-20 araE EGP Major facilitator Superfamily
PAKCMHMK_00450 0.0 cydD V ABC transporter transmembrane region
PAKCMHMK_00451 1.6e-27 araE EGP Major facilitator Superfamily
PAKCMHMK_00452 1.2e-260 G Bacterial extracellular solute-binding protein
PAKCMHMK_00453 3.9e-173 malC G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00454 4.4e-167 G ABC transporter permease
PAKCMHMK_00455 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PAKCMHMK_00456 8.8e-190 K helix_turn _helix lactose operon repressor
PAKCMHMK_00457 0.0 ganB 3.2.1.89 G Glycosyl hydrolase family 53
PAKCMHMK_00458 1.5e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
PAKCMHMK_00459 2.9e-142 L Protein of unknown function (DUF1524)
PAKCMHMK_00460 1e-235 mntH P H( )-stimulated, divalent metal cation uptake system
PAKCMHMK_00461 1.6e-283 EGP Major facilitator Superfamily
PAKCMHMK_00462 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
PAKCMHMK_00463 0.0 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PAKCMHMK_00464 6.3e-108 3.1.3.48 T Low molecular weight phosphatase family
PAKCMHMK_00465 4.2e-90 S ABC-2 family transporter protein
PAKCMHMK_00466 1.5e-90 S ABC-2 family transporter protein
PAKCMHMK_00467 4.4e-07 pspC KT PspC domain protein
PAKCMHMK_00468 3.5e-19 KT COG COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAKCMHMK_00469 4.2e-121 T Psort location Cytoplasmic, score
PAKCMHMK_00470 3.9e-229 2.7.13.3 T Histidine kinase
PAKCMHMK_00471 2.9e-230 V Psort location CytoplasmicMembrane, score
PAKCMHMK_00472 1.5e-234 V Efflux ABC transporter, permease protein
PAKCMHMK_00473 1.7e-111 V Psort location CytoplasmicMembrane, score
PAKCMHMK_00474 3.9e-57 K Helix-turn-helix XRE-family like proteins
PAKCMHMK_00475 1.4e-66 K Sigma-70, region 4
PAKCMHMK_00476 8.8e-34 S Helix-turn-helix domain
PAKCMHMK_00477 1.2e-29 S Psort location Cytoplasmic, score 8.87
PAKCMHMK_00478 1.3e-226 L DNA binding domain of tn916 integrase
PAKCMHMK_00479 1.4e-150 GT4 M Psort location Cytoplasmic, score 8.87
PAKCMHMK_00480 1.4e-245 MA20_17390 GT4 M Glycosyl transferases group 1
PAKCMHMK_00481 1.5e-253 cps2J S Polysaccharide biosynthesis protein
PAKCMHMK_00482 8.3e-201 2.4.1.166 GT2 M Glycosyltransferase like family 2
PAKCMHMK_00483 5.1e-133 H Hexapeptide repeat of succinyl-transferase
PAKCMHMK_00484 1e-212 S Polysaccharide pyruvyl transferase
PAKCMHMK_00485 5.8e-188 M Glycosyltransferase like family 2
PAKCMHMK_00487 3e-107 wzy S EpsG family
PAKCMHMK_00488 1.6e-191 G Acyltransferase family
PAKCMHMK_00490 4e-150 L IstB-like ATP binding protein
PAKCMHMK_00491 8.7e-33 L Transposase
PAKCMHMK_00492 3.6e-148 L IstB-like ATP binding protein
PAKCMHMK_00493 9.8e-296 L PFAM Integrase catalytic
PAKCMHMK_00494 1.6e-52 L PFAM Integrase catalytic
PAKCMHMK_00495 0.0 C Domain of unknown function (DUF4365)
PAKCMHMK_00496 3e-50 S Bacteriophage abortive infection AbiH
PAKCMHMK_00498 2.7e-88 K Helix-turn-helix XRE-family like proteins
PAKCMHMK_00500 1.1e-169 S enterobacterial common antigen metabolic process
PAKCMHMK_00501 1e-40 S Protein of unknown function (DUF3800)
PAKCMHMK_00502 8.3e-14 L Helix-turn-helix domain
PAKCMHMK_00503 5.8e-266 S Psort location CytoplasmicMembrane, score 9.99
PAKCMHMK_00504 8.3e-70
PAKCMHMK_00505 2.2e-244 wcoI DM Psort location CytoplasmicMembrane, score
PAKCMHMK_00506 3e-150
PAKCMHMK_00507 8.8e-160 S G5
PAKCMHMK_00508 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
PAKCMHMK_00509 1.6e-120 F Domain of unknown function (DUF4916)
PAKCMHMK_00510 1.4e-158 mhpC I Alpha/beta hydrolase family
PAKCMHMK_00511 3.7e-211 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PAKCMHMK_00512 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PAKCMHMK_00513 5.5e-225 S Uncharacterized conserved protein (DUF2183)
PAKCMHMK_00514 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
PAKCMHMK_00515 5.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PAKCMHMK_00516 3.1e-147 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
PAKCMHMK_00517 2.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
PAKCMHMK_00518 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PAKCMHMK_00519 6.3e-230 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
PAKCMHMK_00520 6.1e-229 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PAKCMHMK_00521 2.8e-123 glpR K DeoR C terminal sensor domain
PAKCMHMK_00522 8.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
PAKCMHMK_00523 5.3e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
PAKCMHMK_00524 6.4e-44 gcvR T Belongs to the UPF0237 family
PAKCMHMK_00525 3.2e-253 S UPF0210 protein
PAKCMHMK_00526 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAKCMHMK_00527 1.1e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
PAKCMHMK_00528 2.3e-128
PAKCMHMK_00529 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKCMHMK_00530 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKCMHMK_00531 0.0 E Transglutaminase-like superfamily
PAKCMHMK_00532 5.6e-239 S Protein of unknown function DUF58
PAKCMHMK_00533 0.0 S Fibronectin type 3 domain
PAKCMHMK_00534 6.1e-221 KLT Protein tyrosine kinase
PAKCMHMK_00535 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
PAKCMHMK_00536 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
PAKCMHMK_00537 1.5e-234 G Major Facilitator Superfamily
PAKCMHMK_00538 9.2e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PAKCMHMK_00539 1.7e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAKCMHMK_00540 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAKCMHMK_00541 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
PAKCMHMK_00542 3.4e-258 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAKCMHMK_00543 7.5e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAKCMHMK_00544 1.7e-268 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
PAKCMHMK_00545 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAKCMHMK_00546 1.3e-205 ftsE D Cell division ATP-binding protein FtsE
PAKCMHMK_00547 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
PAKCMHMK_00548 4e-147 usp 3.5.1.28 CBM50 D CHAP domain protein
PAKCMHMK_00549 6.3e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAKCMHMK_00550 3.6e-142 pknD ET ABC transporter, substrate-binding protein, family 3
PAKCMHMK_00551 3.4e-169 pknD ET ABC transporter, substrate-binding protein, family 3
PAKCMHMK_00552 1.6e-153 yecS E Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00553 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
PAKCMHMK_00554 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAKCMHMK_00555 3.1e-141 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
PAKCMHMK_00556 1.5e-186 K Periplasmic binding protein domain
PAKCMHMK_00557 2.2e-168 malC G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00558 9.5e-170 G ABC transporter permease
PAKCMHMK_00559 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PAKCMHMK_00560 5.1e-259 G Bacterial extracellular solute-binding protein
PAKCMHMK_00561 4e-278 G Bacterial extracellular solute-binding protein
PAKCMHMK_00562 5.9e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PAKCMHMK_00563 1.8e-290 E ABC transporter, substrate-binding protein, family 5
PAKCMHMK_00564 7.4e-167 P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00565 1.3e-147 EP Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00566 4.2e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
PAKCMHMK_00567 1.3e-137 sapF E ATPases associated with a variety of cellular activities
PAKCMHMK_00568 9.7e-194 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
PAKCMHMK_00569 1.4e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PAKCMHMK_00570 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PAKCMHMK_00571 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAKCMHMK_00572 6.5e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAKCMHMK_00573 1.1e-272 yhdG E aromatic amino acid transport protein AroP K03293
PAKCMHMK_00574 4.1e-264 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAKCMHMK_00575 3.1e-245 dgt 3.1.5.1 F Phosphohydrolase-associated domain
PAKCMHMK_00576 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAKCMHMK_00577 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PAKCMHMK_00578 1.1e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PAKCMHMK_00579 1.7e-295 EK Alanine-glyoxylate amino-transferase
PAKCMHMK_00580 4.2e-209 ybiR P Citrate transporter
PAKCMHMK_00581 3.3e-30
PAKCMHMK_00582 7e-43 G Alpha-L-arabinofuranosidase C-terminal domain
PAKCMHMK_00583 9.5e-158 K Helix-turn-helix domain, rpiR family
PAKCMHMK_00586 4.3e-258 G Bacterial extracellular solute-binding protein
PAKCMHMK_00587 9.9e-225 K helix_turn _helix lactose operon repressor
PAKCMHMK_00588 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PAKCMHMK_00589 3.1e-14 L Psort location Cytoplasmic, score 8.87
PAKCMHMK_00590 0.0 E ABC transporter, substrate-binding protein, family 5
PAKCMHMK_00591 1.6e-85 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
PAKCMHMK_00592 8.1e-135 V ATPases associated with a variety of cellular activities
PAKCMHMK_00593 4.4e-175 M Conserved repeat domain
PAKCMHMK_00594 8.6e-279 macB_8 V MacB-like periplasmic core domain
PAKCMHMK_00595 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAKCMHMK_00596 2.4e-181 adh3 C Zinc-binding dehydrogenase
PAKCMHMK_00597 5.2e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAKCMHMK_00598 1.1e-222 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAKCMHMK_00599 2.6e-68 zur P Belongs to the Fur family
PAKCMHMK_00600 5.7e-84 ylbB V FtsX-like permease family
PAKCMHMK_00601 2.9e-27 ylbB V FtsX-like permease family
PAKCMHMK_00602 8.9e-70 XK27_06785 V ABC transporter
PAKCMHMK_00603 6.1e-35
PAKCMHMK_00604 8.7e-27 zur P Ferric uptake regulator family
PAKCMHMK_00605 7.8e-140 S TIGRFAM TIGR03943 family protein
PAKCMHMK_00606 1.4e-180 ycgR S Predicted permease
PAKCMHMK_00607 2.3e-25 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
PAKCMHMK_00608 1.3e-18 J Ribosomal L32p protein family
PAKCMHMK_00609 1.1e-14 rpmJ J Ribosomal protein L36
PAKCMHMK_00610 4.4e-34 rpmE2 J Ribosomal protein L31
PAKCMHMK_00611 2.5e-44 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAKCMHMK_00612 1.4e-20 rpmG J Ribosomal protein L33
PAKCMHMK_00613 3.9e-29 rpmB J Ribosomal L28 family
PAKCMHMK_00614 1.5e-98 S cobalamin synthesis protein
PAKCMHMK_00615 7.3e-156 P Zinc-uptake complex component A periplasmic
PAKCMHMK_00616 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PAKCMHMK_00617 4.5e-299 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
PAKCMHMK_00618 3.7e-243 purD 6.3.4.13 F Belongs to the GARS family
PAKCMHMK_00619 1.1e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PAKCMHMK_00620 4.3e-291 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PAKCMHMK_00621 2.7e-299 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
PAKCMHMK_00622 2.3e-31
PAKCMHMK_00623 1.2e-13 C Aldo/keto reductase family
PAKCMHMK_00624 6.8e-102 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
PAKCMHMK_00625 2.4e-08 S Protein of unknown function (DUF4230)
PAKCMHMK_00628 1.5e-29 S Protein of unknown function (DUF4230)
PAKCMHMK_00629 4.3e-144
PAKCMHMK_00630 7.1e-113 Q D-alanine [D-alanyl carrier protein] ligase activity
PAKCMHMK_00631 5e-254 Q D-alanine [D-alanyl carrier protein] ligase activity
PAKCMHMK_00632 2e-239 I alpha/beta hydrolase fold
PAKCMHMK_00633 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
PAKCMHMK_00634 3.6e-137 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PAKCMHMK_00635 3.9e-224 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PAKCMHMK_00636 1.9e-228 mtnE 2.6.1.83 E Aminotransferase class I and II
PAKCMHMK_00637 1.4e-217 M Glycosyl transferase 4-like domain
PAKCMHMK_00638 2.3e-195 ltaE 4.1.2.48 E Beta-eliminating lyase
PAKCMHMK_00640 6.6e-111 yocS S SBF-like CPA transporter family (DUF4137)
PAKCMHMK_00641 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAKCMHMK_00642 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAKCMHMK_00643 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAKCMHMK_00644 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAKCMHMK_00645 3.5e-129 tmp1 S Domain of unknown function (DUF4391)
PAKCMHMK_00646 2.3e-145 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
PAKCMHMK_00647 2.7e-186 MA20_14895 S Conserved hypothetical protein 698
PAKCMHMK_00648 2.7e-32 S Psort location CytoplasmicMembrane, score
PAKCMHMK_00649 4.7e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKCMHMK_00650 1.3e-88 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKCMHMK_00651 6.4e-67 K MerR family regulatory protein
PAKCMHMK_00652 5.6e-197 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PAKCMHMK_00653 2.3e-259 S Domain of unknown function (DUF4143)
PAKCMHMK_00654 3.4e-109 P Protein of unknown function DUF47
PAKCMHMK_00655 6.4e-170 ugpQ 3.1.4.46 C Domain of unknown function
PAKCMHMK_00656 2.6e-239 ugpB G Bacterial extracellular solute-binding protein
PAKCMHMK_00657 4e-142 ugpE G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00658 3.5e-164 ugpA P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00659 1.5e-140 P Phosphate transporter family
PAKCMHMK_00660 1.3e-190 K helix_turn _helix lactose operon repressor
PAKCMHMK_00661 1.5e-144 K LysR substrate binding domain
PAKCMHMK_00662 1.7e-101 K LysR substrate binding domain
PAKCMHMK_00663 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PAKCMHMK_00664 5.7e-242 vbsD V MatE
PAKCMHMK_00665 1.1e-89 magIII L endonuclease III
PAKCMHMK_00667 2.2e-109 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PAKCMHMK_00668 6.4e-41 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PAKCMHMK_00669 2.3e-185 S Membrane transport protein
PAKCMHMK_00670 7.4e-48 4.1.1.44 L Cupin 2, conserved barrel domain protein
PAKCMHMK_00672 0.0 M probably involved in cell wall
PAKCMHMK_00673 1.2e-252 3.2.1.14 GH18 S Carbohydrate binding domain
PAKCMHMK_00674 0.0 T Diguanylate cyclase, GGDEF domain
PAKCMHMK_00675 1.6e-135 ybbM V Uncharacterised protein family (UPF0014)
PAKCMHMK_00676 4.5e-129 ybbL V ATPases associated with a variety of cellular activities
PAKCMHMK_00677 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAKCMHMK_00678 1.7e-93 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAKCMHMK_00679 2.2e-240 carA 6.3.5.5 F Belongs to the CarA family
PAKCMHMK_00680 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PAKCMHMK_00681 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PAKCMHMK_00682 2.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PAKCMHMK_00683 3.7e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
PAKCMHMK_00685 0.0 tetP J Elongation factor G, domain IV
PAKCMHMK_00686 7.4e-126 ypfH S Phospholipase/Carboxylesterase
PAKCMHMK_00687 2.6e-233 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PAKCMHMK_00688 1.2e-41 XAC3035 O Glutaredoxin
PAKCMHMK_00689 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
PAKCMHMK_00690 7.2e-116 XK27_08050 O prohibitin homologues
PAKCMHMK_00691 3.3e-58 S Domain of unknown function (DUF4143)
PAKCMHMK_00692 2.9e-159 S Patatin-like phospholipase
PAKCMHMK_00693 1.5e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PAKCMHMK_00694 2.7e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PAKCMHMK_00695 3.2e-127 S Vitamin K epoxide reductase
PAKCMHMK_00696 6.5e-170 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
PAKCMHMK_00697 7.2e-33 S Protein of unknown function (DUF3107)
PAKCMHMK_00698 2e-302 mphA S Aminoglycoside phosphotransferase
PAKCMHMK_00699 6.8e-292 uvrD2 3.6.4.12 L DNA helicase
PAKCMHMK_00700 1.2e-297 S Zincin-like metallopeptidase
PAKCMHMK_00701 1.5e-156 lon T Belongs to the peptidase S16 family
PAKCMHMK_00702 1.6e-73 S Protein of unknown function (DUF3052)
PAKCMHMK_00704 1.7e-208 2.7.11.1 NU Tfp pilus assembly protein FimV
PAKCMHMK_00705 2.9e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PAKCMHMK_00706 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PAKCMHMK_00707 0.0 I acetylesterase activity
PAKCMHMK_00708 4.5e-129 recO L Involved in DNA repair and RecF pathway recombination
PAKCMHMK_00709 1.5e-154 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAKCMHMK_00710 2.3e-134 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00711 1.5e-189 P NMT1/THI5 like
PAKCMHMK_00712 9.6e-225 E Aminotransferase class I and II
PAKCMHMK_00713 3.9e-142 bioM P ATPases associated with a variety of cellular activities
PAKCMHMK_00715 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAKCMHMK_00716 0.0 S Tetratricopeptide repeat
PAKCMHMK_00717 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAKCMHMK_00718 6e-205 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PAKCMHMK_00719 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
PAKCMHMK_00720 7.8e-143 S Domain of unknown function (DUF4191)
PAKCMHMK_00721 2.1e-277 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PAKCMHMK_00722 6.9e-102 S Protein of unknown function (DUF3043)
PAKCMHMK_00723 1.5e-258 argE E Peptidase dimerisation domain
PAKCMHMK_00724 1.8e-107 ykoE S ABC-type cobalt transport system, permease component
PAKCMHMK_00725 7.2e-275 ykoD P ATPases associated with a variety of cellular activities
PAKCMHMK_00726 1.2e-158 cbiQ P Cobalt transport protein
PAKCMHMK_00727 1.1e-158 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKCMHMK_00728 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAKCMHMK_00729 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
PAKCMHMK_00730 3.7e-93
PAKCMHMK_00731 6.1e-202 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PAKCMHMK_00732 1.4e-212 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PAKCMHMK_00733 1.1e-178 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PAKCMHMK_00734 2.3e-248 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
PAKCMHMK_00735 3.3e-183 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PAKCMHMK_00736 2.3e-82 argR K Regulates arginine biosynthesis genes
PAKCMHMK_00737 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PAKCMHMK_00738 1.1e-91 L PFAM Integrase catalytic
PAKCMHMK_00739 8.5e-44 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
PAKCMHMK_00740 2.4e-32 relB L RelB antitoxin
PAKCMHMK_00741 1.2e-280 argH 4.3.2.1 E argininosuccinate lyase
PAKCMHMK_00742 1.2e-28 thiS 2.8.1.10 H ThiS family
PAKCMHMK_00743 1.4e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PAKCMHMK_00744 8.6e-145 moeB 2.7.7.80 H ThiF family
PAKCMHMK_00745 3.1e-71 M1-798 P Rhodanese Homology Domain
PAKCMHMK_00746 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKCMHMK_00747 3.9e-139 S Putative ABC-transporter type IV
PAKCMHMK_00748 9.1e-82 S Protein of unknown function (DUF975)
PAKCMHMK_00749 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAKCMHMK_00750 4.8e-159 L Tetratricopeptide repeat
PAKCMHMK_00751 6e-199 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PAKCMHMK_00753 5.5e-141 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PAKCMHMK_00754 1.8e-95
PAKCMHMK_00755 4e-69 trkA P TrkA-N domain
PAKCMHMK_00756 8.3e-12 trkB P Cation transport protein
PAKCMHMK_00757 2.8e-182 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAKCMHMK_00758 0.0 recN L May be involved in recombinational repair of damaged DNA
PAKCMHMK_00759 9.4e-118 S Haloacid dehalogenase-like hydrolase
PAKCMHMK_00760 7.4e-57 J Acetyltransferase (GNAT) domain
PAKCMHMK_00761 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
PAKCMHMK_00762 1.1e-172 V ATPases associated with a variety of cellular activities
PAKCMHMK_00763 1.7e-120 S ABC-2 family transporter protein
PAKCMHMK_00764 1.8e-70 S ABC-2 family transporter protein
PAKCMHMK_00765 6.2e-282 thrC 4.2.3.1 E Threonine synthase N terminus
PAKCMHMK_00766 6.4e-235 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PAKCMHMK_00767 7.9e-97
PAKCMHMK_00768 3.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAKCMHMK_00769 4.6e-140 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
PAKCMHMK_00770 0.0 S Uncharacterised protein family (UPF0182)
PAKCMHMK_00771 7.4e-75 2.3.1.183 M Acetyltransferase (GNAT) domain
PAKCMHMK_00772 1.5e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAKCMHMK_00773 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAKCMHMK_00774 5.4e-180 1.1.1.65 C Aldo/keto reductase family
PAKCMHMK_00775 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAKCMHMK_00776 6.6e-70 divIC D Septum formation initiator
PAKCMHMK_00777 1.3e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
PAKCMHMK_00778 1.3e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PAKCMHMK_00780 2.9e-94
PAKCMHMK_00781 2.5e-280 sdaA 4.3.1.17 E Serine dehydratase alpha chain
PAKCMHMK_00782 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
PAKCMHMK_00783 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAKCMHMK_00784 7e-146 yplQ S Haemolysin-III related
PAKCMHMK_00785 2.2e-279 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAKCMHMK_00786 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PAKCMHMK_00787 0.0 D FtsK/SpoIIIE family
PAKCMHMK_00788 1.2e-199 K Cell envelope-related transcriptional attenuator domain
PAKCMHMK_00789 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PAKCMHMK_00790 0.0 S Glycosyl transferase, family 2
PAKCMHMK_00791 1.6e-261
PAKCMHMK_00792 1.8e-77 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
PAKCMHMK_00793 2.8e-148 cof 5.2.1.8 T Eukaryotic phosphomannomutase
PAKCMHMK_00794 2.2e-122 ctsW S Phosphoribosyl transferase domain
PAKCMHMK_00795 4.4e-197 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAKCMHMK_00796 1e-128 T Response regulator receiver domain protein
PAKCMHMK_00797 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PAKCMHMK_00798 2.1e-100 carD K CarD-like/TRCF domain
PAKCMHMK_00799 6.2e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PAKCMHMK_00800 2.6e-136 znuB U ABC 3 transport family
PAKCMHMK_00801 3.8e-162 znuC P ATPases associated with a variety of cellular activities
PAKCMHMK_00802 2.1e-176 P Zinc-uptake complex component A periplasmic
PAKCMHMK_00803 5.8e-163 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAKCMHMK_00804 3.2e-254 rpsA J Ribosomal protein S1
PAKCMHMK_00805 1.6e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAKCMHMK_00806 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAKCMHMK_00807 2.1e-177 terC P Integral membrane protein, TerC family
PAKCMHMK_00808 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
PAKCMHMK_00809 1.1e-109 aspA 3.6.1.13 L NUDIX domain
PAKCMHMK_00811 2.8e-124 pdtaR T Response regulator receiver domain protein
PAKCMHMK_00812 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAKCMHMK_00813 5.1e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
PAKCMHMK_00814 4e-127 3.6.1.13 L NUDIX domain
PAKCMHMK_00815 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PAKCMHMK_00816 1.4e-24 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PAKCMHMK_00817 4.8e-90 K Putative zinc ribbon domain
PAKCMHMK_00818 2.1e-125 S GyrI-like small molecule binding domain
PAKCMHMK_00819 1.2e-20 tag 3.2.2.20 L Methyladenine glycosylase
PAKCMHMK_00821 2.5e-121
PAKCMHMK_00822 1.9e-214 ykiI
PAKCMHMK_00823 1.3e-251 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PAKCMHMK_00824 4.8e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKCMHMK_00825 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PAKCMHMK_00827 1.9e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKCMHMK_00828 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
PAKCMHMK_00829 1.3e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PAKCMHMK_00830 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PAKCMHMK_00831 3.9e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAKCMHMK_00832 6.5e-66 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAKCMHMK_00833 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
PAKCMHMK_00836 5.6e-158 S Sucrose-6F-phosphate phosphohydrolase
PAKCMHMK_00837 1.6e-177 metQ P NLPA lipoprotein
PAKCMHMK_00838 9.3e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAKCMHMK_00839 2.8e-112 metI P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00840 2.2e-226 S Peptidase dimerisation domain
PAKCMHMK_00841 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PAKCMHMK_00842 2.6e-38
PAKCMHMK_00843 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PAKCMHMK_00844 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAKCMHMK_00845 8.3e-119 S Protein of unknown function (DUF3000)
PAKCMHMK_00846 1.7e-251 rnd 3.1.13.5 J 3'-5' exonuclease
PAKCMHMK_00847 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAKCMHMK_00848 2.8e-244 clcA_2 P Voltage gated chloride channel
PAKCMHMK_00849 2e-59
PAKCMHMK_00850 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAKCMHMK_00851 1.1e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAKCMHMK_00852 2.1e-252 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAKCMHMK_00855 5.1e-242 patB 4.4.1.8 E Aminotransferase, class I II
PAKCMHMK_00856 1.5e-237 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PAKCMHMK_00857 1.6e-168 fmt2 3.2.2.10 S Belongs to the LOG family
PAKCMHMK_00858 3.8e-114 safC S O-methyltransferase
PAKCMHMK_00859 4.2e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
PAKCMHMK_00860 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
PAKCMHMK_00861 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
PAKCMHMK_00862 2e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
PAKCMHMK_00863 3.7e-75 yraN L Belongs to the UPF0102 family
PAKCMHMK_00864 1.6e-23 L Transposase and inactivated derivatives IS30 family
PAKCMHMK_00865 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PAKCMHMK_00866 4.5e-252 metY 2.5.1.49 E Aminotransferase class-V
PAKCMHMK_00867 1.4e-170 V ABC transporter, ATP-binding protein
PAKCMHMK_00868 0.0 MV MacB-like periplasmic core domain
PAKCMHMK_00869 6.4e-140 K helix_turn_helix, Lux Regulon
PAKCMHMK_00870 0.0 tcsS2 T Histidine kinase
PAKCMHMK_00871 2.2e-292 pip 3.4.11.5 S alpha/beta hydrolase fold
PAKCMHMK_00872 1.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAKCMHMK_00873 5.1e-156 cjaA ET Bacterial periplasmic substrate-binding proteins
PAKCMHMK_00874 1.2e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
PAKCMHMK_00875 1.2e-118 E Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00876 7.4e-110 papP E Binding-protein-dependent transport system inner membrane component
PAKCMHMK_00877 4.8e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAKCMHMK_00878 7.3e-59 yccF S Inner membrane component domain
PAKCMHMK_00879 5.9e-12
PAKCMHMK_00880 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
PAKCMHMK_00881 1.2e-13 EGP Transmembrane secretion effector
PAKCMHMK_00882 1.3e-288 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PAKCMHMK_00883 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
PAKCMHMK_00884 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAKCMHMK_00885 8.7e-176 2.7.1.2 GK ROK family
PAKCMHMK_00886 3.1e-220 GK ROK family
PAKCMHMK_00887 6.4e-159 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PAKCMHMK_00888 7.5e-253 gtr U Sugar (and other) transporter
PAKCMHMK_00889 0.0 P Domain of unknown function (DUF4976)
PAKCMHMK_00890 7.6e-271 aslB C Iron-sulfur cluster-binding domain
PAKCMHMK_00891 3.2e-107 S Sulfite exporter TauE/SafE
PAKCMHMK_00892 2.7e-58 L Helix-turn-helix domain
PAKCMHMK_00893 2.2e-92 S Sulfite exporter TauE/SafE
PAKCMHMK_00894 1.7e-63 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAKCMHMK_00895 5.4e-240 EGP Major facilitator Superfamily
PAKCMHMK_00896 7.9e-108 3.1.3.27 E haloacid dehalogenase-like hydrolase
PAKCMHMK_00897 3e-161 3.1.3.73 G Phosphoglycerate mutase family
PAKCMHMK_00898 1.1e-234 rutG F Permease family
PAKCMHMK_00899 2.5e-302 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
PAKCMHMK_00900 1.4e-242 nplT G Alpha amylase, catalytic domain
PAKCMHMK_00901 4.5e-189 pit P Phosphate transporter family
PAKCMHMK_00902 2.1e-114 MA20_27875 P Protein of unknown function DUF47
PAKCMHMK_00903 8.3e-114 K helix_turn_helix, Lux Regulon
PAKCMHMK_00904 4.6e-244 T Histidine kinase
PAKCMHMK_00905 1.3e-120 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PAKCMHMK_00906 1.3e-187 V ATPases associated with a variety of cellular activities
PAKCMHMK_00907 1.5e-225 V ABC-2 family transporter protein
PAKCMHMK_00908 9e-254 V ABC-2 family transporter protein
PAKCMHMK_00909 4.5e-285 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PAKCMHMK_00910 1.5e-39 E GDSL-like Lipase/Acylhydrolase family
PAKCMHMK_00911 1.6e-195
PAKCMHMK_00912 4e-85 3.4.13.21 E Peptidase family S51
PAKCMHMK_00913 1e-105 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
PAKCMHMK_00914 2.6e-161 M pfam nlp p60
PAKCMHMK_00915 2.1e-159 I Serine aminopeptidase, S33
PAKCMHMK_00916 1.1e-40 S Protein of unknown function (DUF2975)
PAKCMHMK_00917 2.8e-31 yozG K Cro/C1-type HTH DNA-binding domain
PAKCMHMK_00918 8.8e-243 pbuX F Permease family
PAKCMHMK_00919 1.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAKCMHMK_00920 0.0 pcrA 3.6.4.12 L DNA helicase
PAKCMHMK_00921 3.4e-62 S Domain of unknown function (DUF4418)
PAKCMHMK_00922 1.3e-216 V FtsX-like permease family
PAKCMHMK_00923 2.5e-161 lolD V ABC transporter
PAKCMHMK_00924 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAKCMHMK_00925 1.8e-155 S Peptidase C26
PAKCMHMK_00926 2.5e-91 3.5.4.5 F cytidine deaminase activity
PAKCMHMK_00927 3.1e-46 sdpI S SdpI/YhfL protein family
PAKCMHMK_00928 1.2e-111 E Transglutaminase-like superfamily
PAKCMHMK_00929 7.1e-67 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAKCMHMK_00930 1.2e-48 relB L RelB antitoxin
PAKCMHMK_00931 5.6e-129 pgm3 G Phosphoglycerate mutase family
PAKCMHMK_00932 2.4e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
PAKCMHMK_00933 1.6e-35
PAKCMHMK_00934 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAKCMHMK_00935 2.7e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAKCMHMK_00936 2.3e-194 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAKCMHMK_00937 4.1e-70 3.4.23.43 S Type IV leader peptidase family
PAKCMHMK_00938 7.3e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PAKCMHMK_00939 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PAKCMHMK_00940 1.3e-78 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
PAKCMHMK_00941 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAKCMHMK_00942 0.0 S L,D-transpeptidase catalytic domain
PAKCMHMK_00943 1.5e-291 sufB O FeS assembly protein SufB
PAKCMHMK_00944 1.2e-235 sufD O FeS assembly protein SufD
PAKCMHMK_00945 7e-144 sufC O FeS assembly ATPase SufC
PAKCMHMK_00946 2.5e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PAKCMHMK_00947 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
PAKCMHMK_00948 3.2e-109 yitW S Iron-sulfur cluster assembly protein
PAKCMHMK_00949 1.1e-242 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PAKCMHMK_00950 3.3e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
PAKCMHMK_00952 4.6e-141 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAKCMHMK_00953 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
PAKCMHMK_00954 2.5e-217 phoH T PhoH-like protein
PAKCMHMK_00955 4.7e-102 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAKCMHMK_00956 5.6e-248 corC S CBS domain
PAKCMHMK_00957 4.3e-186 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAKCMHMK_00958 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PAKCMHMK_00959 2.4e-204 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
PAKCMHMK_00960 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
PAKCMHMK_00961 3e-233 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PAKCMHMK_00962 1.4e-234 yhjX EGP Major facilitator Superfamily
PAKCMHMK_00963 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PAKCMHMK_00964 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
PAKCMHMK_00965 6.7e-143 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
PAKCMHMK_00966 5.3e-136 S UPF0126 domain
PAKCMHMK_00967 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
PAKCMHMK_00968 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAKCMHMK_00969 7.4e-255 hemN H Involved in the biosynthesis of porphyrin-containing compound
PAKCMHMK_00971 5e-190 K helix_turn _helix lactose operon repressor
PAKCMHMK_00972 1.4e-64 K helix_turn _helix lactose operon repressor
PAKCMHMK_00973 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
PAKCMHMK_00974 7.2e-302 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PAKCMHMK_00975 0.0 E ABC transporter, substrate-binding protein, family 5
PAKCMHMK_00976 0.0 S Glycosyl hydrolases related to GH101 family, GH129
PAKCMHMK_00977 1.9e-80
PAKCMHMK_00978 2.5e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
PAKCMHMK_00979 9.3e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
PAKCMHMK_00980 1.5e-160 S Sucrose-6F-phosphate phosphohydrolase
PAKCMHMK_00981 3.4e-106 bcp 1.11.1.15 O Redoxin
PAKCMHMK_00982 3.3e-144
PAKCMHMK_00983 2.9e-40 L Transposase, Mutator family
PAKCMHMK_00984 1.1e-175 I alpha/beta hydrolase fold
PAKCMHMK_00985 2.7e-88 S Appr-1'-p processing enzyme
PAKCMHMK_00986 4.2e-146 S phosphoesterase or phosphohydrolase
PAKCMHMK_00987 2e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PAKCMHMK_00989 1.3e-133 S Phospholipase/Carboxylesterase
PAKCMHMK_00990 2.3e-201 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PAKCMHMK_00991 8.4e-99 sixA 3.6.1.55 T Phosphoglycerate mutase family
PAKCMHMK_00993 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PAKCMHMK_00994 2.8e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
PAKCMHMK_00995 4.8e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAKCMHMK_00996 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PAKCMHMK_00997 8.3e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PAKCMHMK_00998 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PAKCMHMK_00999 1.5e-291 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAKCMHMK_01000 9.4e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
PAKCMHMK_01001 1.7e-157 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PAKCMHMK_01002 2.4e-178 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAKCMHMK_01003 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAKCMHMK_01004 3.4e-28
PAKCMHMK_01005 3.6e-218 MA20_36090 S Psort location Cytoplasmic, score 8.87
PAKCMHMK_01006 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
PAKCMHMK_01007 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAKCMHMK_01008 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAKCMHMK_01009 1.1e-300 ybiT S ABC transporter
PAKCMHMK_01010 1.4e-130 S Enoyl-(Acyl carrier protein) reductase
PAKCMHMK_01011 5.2e-56 P ABC transporter
PAKCMHMK_01012 8.3e-59 P ABC transporter
PAKCMHMK_01013 3.6e-50 XK26_04485 P Cobalt transport protein
PAKCMHMK_01014 3.8e-32 XK26_04485 P Cobalt transport protein
PAKCMHMK_01015 5e-234 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
PAKCMHMK_01016 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAKCMHMK_01017 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAKCMHMK_01018 5.6e-191 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
PAKCMHMK_01019 8.3e-179 rapZ S Displays ATPase and GTPase activities
PAKCMHMK_01020 3.5e-169 whiA K May be required for sporulation
PAKCMHMK_01021 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
PAKCMHMK_01022 9.3e-147 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAKCMHMK_01023 2.5e-34 secG U Preprotein translocase SecG subunit
PAKCMHMK_01024 4.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PAKCMHMK_01025 2e-160 S Sucrose-6F-phosphate phosphohydrolase
PAKCMHMK_01026 3.6e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
PAKCMHMK_01027 5.8e-190
PAKCMHMK_01028 1.4e-240 brnQ U Component of the transport system for branched-chain amino acids
PAKCMHMK_01029 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PAKCMHMK_01030 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
PAKCMHMK_01031 1.1e-190 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAKCMHMK_01032 6.8e-212 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAKCMHMK_01033 6.2e-156 G Fructosamine kinase
PAKCMHMK_01034 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PAKCMHMK_01035 1.3e-135 S PAC2 family
PAKCMHMK_01041 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAKCMHMK_01042 2.2e-110 hit 2.7.7.53 FG HIT domain
PAKCMHMK_01043 2e-111 yebC K transcriptional regulatory protein
PAKCMHMK_01044 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PAKCMHMK_01045 4.7e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAKCMHMK_01046 5.2e-198 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAKCMHMK_01047 8.1e-52 yajC U Preprotein translocase subunit
PAKCMHMK_01048 2.3e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAKCMHMK_01049 3.4e-222 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PAKCMHMK_01050 9.3e-164 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PAKCMHMK_01051 1.9e-234
PAKCMHMK_01052 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PAKCMHMK_01053 4.8e-32
PAKCMHMK_01054 5e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAKCMHMK_01055 1.2e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAKCMHMK_01056 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
PAKCMHMK_01058 2.7e-165 supH S Sucrose-6F-phosphate phosphohydrolase
PAKCMHMK_01059 1.1e-294 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
PAKCMHMK_01060 0.0 pafB K WYL domain
PAKCMHMK_01061 6.8e-53
PAKCMHMK_01062 0.0 helY L DEAD DEAH box helicase
PAKCMHMK_01063 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PAKCMHMK_01064 5.7e-140 pgp 3.1.3.18 S HAD-hyrolase-like
PAKCMHMK_01065 4.7e-37
PAKCMHMK_01066 3.8e-64
PAKCMHMK_01067 2.6e-112 K helix_turn_helix, mercury resistance
PAKCMHMK_01068 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
PAKCMHMK_01069 2.2e-140 S Bacterial protein of unknown function (DUF881)
PAKCMHMK_01070 3.9e-35 sbp S Protein of unknown function (DUF1290)
PAKCMHMK_01071 4.2e-170 S Bacterial protein of unknown function (DUF881)
PAKCMHMK_01072 1.2e-106 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAKCMHMK_01073 7.9e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
PAKCMHMK_01074 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
PAKCMHMK_01075 9.4e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
PAKCMHMK_01076 1.5e-185 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAKCMHMK_01077 3.2e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PAKCMHMK_01078 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAKCMHMK_01079 3.2e-132 S SOS response associated peptidase (SRAP)
PAKCMHMK_01080 1.6e-157 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PAKCMHMK_01081 1.1e-259 mmuP E amino acid
PAKCMHMK_01082 1.9e-50 EGP Major facilitator Superfamily
PAKCMHMK_01083 2.5e-189 V VanZ like family
PAKCMHMK_01084 2.7e-69 cefD 5.1.1.17 E Aminotransferase, class V
PAKCMHMK_01085 8.7e-34 S Uncharacterized protein conserved in bacteria (DUF2316)
PAKCMHMK_01086 3.3e-100 S Acetyltransferase (GNAT) domain
PAKCMHMK_01087 3.3e-50
PAKCMHMK_01088 3.8e-08 K helix_turn_helix, Lux Regulon
PAKCMHMK_01089 4.5e-20 2.7.13.3 T Histidine kinase
PAKCMHMK_01090 5.5e-193 2.7.13.3 T Histidine kinase
PAKCMHMK_01091 2e-126 K helix_turn_helix, Lux Regulon
PAKCMHMK_01092 3e-95
PAKCMHMK_01093 3.6e-144 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAKCMHMK_01094 5.4e-92 lolD Q ATPases associated with a variety of cellular activities
PAKCMHMK_01095 2.7e-176 V MacB-like periplasmic core domain
PAKCMHMK_01096 3.2e-40 relB L RelB antitoxin
PAKCMHMK_01097 3.8e-50 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PAKCMHMK_01098 8.4e-26 2.7.13.3 T Histidine kinase
PAKCMHMK_01099 7.8e-97 rpoE4 K Sigma-70 region 2
PAKCMHMK_01100 7.5e-19 S Psort location CytoplasmicMembrane, score
PAKCMHMK_01102 2.6e-83
PAKCMHMK_01103 4.6e-135
PAKCMHMK_01104 1.3e-162 yfiL V ATPases associated with a variety of cellular activities
PAKCMHMK_01105 4.5e-70
PAKCMHMK_01106 1.4e-62
PAKCMHMK_01107 1.2e-147 S EamA-like transporter family
PAKCMHMK_01108 1.4e-102
PAKCMHMK_01109 2.5e-127
PAKCMHMK_01110 2.2e-122 V ATPases associated with a variety of cellular activities
PAKCMHMK_01111 8.8e-16 fic D Fic/DOC family
PAKCMHMK_01112 4.1e-23
PAKCMHMK_01113 3.5e-109
PAKCMHMK_01114 3.7e-45 K sequence-specific DNA binding
PAKCMHMK_01115 9.1e-33 hipA 2.7.11.1 S kinase activity
PAKCMHMK_01117 1.7e-39 2.6.1.76 EGP Major Facilitator Superfamily
PAKCMHMK_01118 6.3e-20 G Major facilitator Superfamily
PAKCMHMK_01119 4.7e-296 mmuP E amino acid
PAKCMHMK_01121 1e-62 yeaO K Protein of unknown function, DUF488
PAKCMHMK_01122 1.3e-75
PAKCMHMK_01123 6.7e-171 3.6.4.12
PAKCMHMK_01124 2e-93 yijF S Domain of unknown function (DUF1287)
PAKCMHMK_01125 6.4e-298 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PAKCMHMK_01126 5.3e-71 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PAKCMHMK_01127 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PAKCMHMK_01128 3.6e-76 3.5.1.124 S DJ-1/PfpI family
PAKCMHMK_01129 1.6e-111 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PAKCMHMK_01130 3.7e-174 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
PAKCMHMK_01131 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAKCMHMK_01132 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PAKCMHMK_01133 3.1e-145 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAKCMHMK_01134 5.8e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
PAKCMHMK_01135 2.2e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAKCMHMK_01136 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
PAKCMHMK_01137 3.3e-91
PAKCMHMK_01138 1.5e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
PAKCMHMK_01139 4.6e-243 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
PAKCMHMK_01140 1e-256 G ABC transporter substrate-binding protein
PAKCMHMK_01141 2e-35 M Peptidase family M23
PAKCMHMK_01143 3.9e-52 xerH L Phage integrase family
PAKCMHMK_01144 1.5e-124 2.7.11.1 S HipA-like C-terminal domain
PAKCMHMK_01148 2.7e-143 S Fic/DOC family
PAKCMHMK_01149 1.6e-135 L PFAM Relaxase mobilization nuclease family protein
PAKCMHMK_01150 8.2e-199 V AAA domain, putative AbiEii toxin, Type IV TA system
PAKCMHMK_01151 1.9e-142 S ABC-2 family transporter protein
PAKCMHMK_01152 8.9e-140
PAKCMHMK_01153 2.6e-59
PAKCMHMK_01155 3.3e-239 T Histidine kinase
PAKCMHMK_01156 1.2e-120 K helix_turn_helix, Lux Regulon
PAKCMHMK_01158 5.2e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAKCMHMK_01159 1e-105 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
PAKCMHMK_01160 1.5e-158 yeaZ 2.3.1.234 O Glycoprotease family
PAKCMHMK_01161 1.5e-87 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
PAKCMHMK_01162 2.4e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
PAKCMHMK_01163 6.4e-307 comE S Competence protein
PAKCMHMK_01164 1.6e-44 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
PAKCMHMK_01165 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKCMHMK_01166 1.2e-160 ET Bacterial periplasmic substrate-binding proteins
PAKCMHMK_01167 5.3e-170 corA P CorA-like Mg2+ transporter protein
PAKCMHMK_01168 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PAKCMHMK_01169 7.7e-233 L ribosomal rna small subunit methyltransferase
PAKCMHMK_01170 1e-69 pdxH S Pfam:Pyridox_oxidase
PAKCMHMK_01171 4e-170 EG EamA-like transporter family
PAKCMHMK_01172 1e-130 C Putative TM nitroreductase
PAKCMHMK_01173 1.9e-31
PAKCMHMK_01174 1.3e-254 S Metal-independent alpha-mannosidase (GH125)
PAKCMHMK_01175 2.9e-237 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PAKCMHMK_01176 3.3e-203 K helix_turn _helix lactose operon repressor
PAKCMHMK_01177 1.9e-72 G Glycosyl hydrolase family 85
PAKCMHMK_01178 1.3e-132 G Glycosyl hydrolase family 85
PAKCMHMK_01179 1.8e-280 G Glycosyl hydrolase family 85
PAKCMHMK_01180 1.9e-54 tnp3512a L Transposase
PAKCMHMK_01181 2.2e-14 G Glycosyl hydrolase family 85
PAKCMHMK_01182 7.9e-177 endOF2 3.2.1.14, 3.2.1.52, 3.2.1.96 GH18,GH20 G Glycosyl hydrolase, family 20, catalytic domain
PAKCMHMK_01183 0.0 bglX-2 3.2.1.21 GH3 G Glycosyl hydrolase family 3 C-terminal domain
PAKCMHMK_01184 7e-258 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PAKCMHMK_01185 3.9e-156 lacG G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01186 1.2e-169 G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01187 3.5e-249 srrA1 G Bacterial extracellular solute-binding protein
PAKCMHMK_01189 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
PAKCMHMK_01190 6.1e-16 L Phage integrase family
PAKCMHMK_01191 7e-39
PAKCMHMK_01192 1e-171 S Fic/DOC family
PAKCMHMK_01193 2.1e-249 S HipA-like C-terminal domain
PAKCMHMK_01195 2.3e-74
PAKCMHMK_01196 6e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAKCMHMK_01197 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAKCMHMK_01198 2.9e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PAKCMHMK_01199 1.4e-47 S Domain of unknown function (DUF4193)
PAKCMHMK_01200 2.2e-148 S Protein of unknown function (DUF3071)
PAKCMHMK_01201 5e-232 S Type I phosphodiesterase / nucleotide pyrophosphatase
PAKCMHMK_01202 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PAKCMHMK_01204 5.2e-43 K Psort location Cytoplasmic, score
PAKCMHMK_01205 1.2e-48 K Psort location Cytoplasmic, score
PAKCMHMK_01206 0.0 lhr L DEAD DEAH box helicase
PAKCMHMK_01207 5.2e-173 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAKCMHMK_01208 3.8e-221 G Major Facilitator Superfamily
PAKCMHMK_01209 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PAKCMHMK_01210 8.2e-191 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAKCMHMK_01211 8.1e-114
PAKCMHMK_01212 6.5e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
PAKCMHMK_01213 0.0 pknL 2.7.11.1 KLT PASTA
PAKCMHMK_01214 6.2e-131 plsC2 2.3.1.51 I Phosphate acyltransferases
PAKCMHMK_01215 1.2e-118
PAKCMHMK_01216 7.1e-192 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PAKCMHMK_01217 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAKCMHMK_01218 1.3e-111 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAKCMHMK_01219 3.5e-103 recX S Modulates RecA activity
PAKCMHMK_01220 8.3e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAKCMHMK_01221 1.2e-31 S Protein of unknown function (DUF3046)
PAKCMHMK_01222 7.6e-78 K Helix-turn-helix XRE-family like proteins
PAKCMHMK_01223 3.3e-95 cinA 3.5.1.42 S Belongs to the CinA family
PAKCMHMK_01224 3.5e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAKCMHMK_01225 0.0 ftsK D FtsK SpoIIIE family protein
PAKCMHMK_01226 6.6e-149 fic D Fic/DOC family
PAKCMHMK_01227 3.7e-182 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAKCMHMK_01228 3.1e-278 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PAKCMHMK_01229 5.2e-150 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
PAKCMHMK_01230 1.5e-164 ydeD EG EamA-like transporter family
PAKCMHMK_01231 8.8e-137 ybhL S Belongs to the BI1 family
PAKCMHMK_01232 7.8e-114 K helix_turn_helix, Lux Regulon
PAKCMHMK_01233 6.8e-121 E Psort location Cytoplasmic, score 8.87
PAKCMHMK_01234 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PAKCMHMK_01235 0.0 ctpE P E1-E2 ATPase
PAKCMHMK_01236 2e-98
PAKCMHMK_01237 3.4e-241 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAKCMHMK_01238 3.8e-134 S Protein of unknown function (DUF3159)
PAKCMHMK_01239 7.3e-155 S Protein of unknown function (DUF3710)
PAKCMHMK_01240 3.3e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
PAKCMHMK_01241 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
PAKCMHMK_01242 1.4e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
PAKCMHMK_01243 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01244 0.0 E ABC transporter, substrate-binding protein, family 5
PAKCMHMK_01245 4.6e-188 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PAKCMHMK_01246 6.4e-148 V ABC transporter, ATP-binding protein
PAKCMHMK_01247 0.0 MV MacB-like periplasmic core domain
PAKCMHMK_01248 4.5e-42
PAKCMHMK_01249 2.5e-189 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
PAKCMHMK_01250 2e-188 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
PAKCMHMK_01251 8.5e-78
PAKCMHMK_01252 0.0 typA T Elongation factor G C-terminus
PAKCMHMK_01253 7e-107 K Virulence activator alpha C-term
PAKCMHMK_01254 9e-136 V ATPases associated with a variety of cellular activities
PAKCMHMK_01255 0.0 V FtsX-like permease family
PAKCMHMK_01256 4.5e-19 naiP U Sugar (and other) transporter
PAKCMHMK_01257 1.8e-237 iscS1 2.8.1.7 E Aminotransferase class-V
PAKCMHMK_01258 6.6e-162 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
PAKCMHMK_01259 2.4e-295 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
PAKCMHMK_01260 6.3e-251 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PAKCMHMK_01261 3.4e-160 nrtR 3.6.1.55 F NUDIX hydrolase
PAKCMHMK_01262 3.1e-116 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PAKCMHMK_01263 8.5e-151 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PAKCMHMK_01264 1.5e-151 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PAKCMHMK_01265 8.3e-160 xerD D recombinase XerD
PAKCMHMK_01266 2.1e-216 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PAKCMHMK_01267 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAKCMHMK_01268 6.2e-25 rpmI J Ribosomal protein L35
PAKCMHMK_01269 1.7e-113 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAKCMHMK_01270 9.3e-53 S Spermine/spermidine synthase domain
PAKCMHMK_01271 4.2e-135 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
PAKCMHMK_01272 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAKCMHMK_01273 8.5e-90 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAKCMHMK_01274 7.5e-183 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PAKCMHMK_01275 8.5e-192 galM 5.1.3.3 G Aldose 1-epimerase
PAKCMHMK_01276 3.3e-188 galM 5.1.3.3 G Aldose 1-epimerase
PAKCMHMK_01277 3.3e-52
PAKCMHMK_01278 1.8e-136 sigH K Belongs to the sigma-70 factor family. ECF subfamily
PAKCMHMK_01279 7.6e-291 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAKCMHMK_01280 6.9e-192 V Acetyltransferase (GNAT) domain
PAKCMHMK_01281 2.8e-20 V Acetyltransferase (GNAT) domain
PAKCMHMK_01282 3e-48 V Acetyltransferase (GNAT) domain
PAKCMHMK_01283 0.0 smc D Required for chromosome condensation and partitioning
PAKCMHMK_01284 4.4e-302 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
PAKCMHMK_01285 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
PAKCMHMK_01286 6.6e-98 3.6.1.55 F NUDIX domain
PAKCMHMK_01287 1.5e-247 nagA 3.5.1.25 G Amidohydrolase family
PAKCMHMK_01288 6.2e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAKCMHMK_01289 8.1e-210 GK ROK family
PAKCMHMK_01290 2.2e-165 2.7.1.2 GK ROK family
PAKCMHMK_01291 2.3e-226 GK ROK family
PAKCMHMK_01292 1.2e-168 2.7.1.4 G pfkB family carbohydrate kinase
PAKCMHMK_01293 6.4e-43 G Major Facilitator Superfamily
PAKCMHMK_01294 2.8e-76 G Major Facilitator Superfamily
PAKCMHMK_01295 1.9e-86 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAKCMHMK_01296 7.7e-14
PAKCMHMK_01297 7.3e-173 ftsQ 6.3.2.4 D Cell division protein FtsQ
PAKCMHMK_01298 2.5e-286 murC 6.3.2.8 M Belongs to the MurCDEF family
PAKCMHMK_01299 1.2e-219 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAKCMHMK_01300 2.5e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
PAKCMHMK_01301 5.1e-273 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAKCMHMK_01302 1.2e-205 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAKCMHMK_01303 7.4e-240 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAKCMHMK_01304 2e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAKCMHMK_01305 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
PAKCMHMK_01306 6.9e-67 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PAKCMHMK_01307 8.7e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAKCMHMK_01308 1.3e-93 mraZ K Belongs to the MraZ family
PAKCMHMK_01309 0.0 L DNA helicase
PAKCMHMK_01310 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PAKCMHMK_01311 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAKCMHMK_01312 1.5e-46 M Lysin motif
PAKCMHMK_01313 6.9e-130 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAKCMHMK_01314 1.4e-162 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAKCMHMK_01315 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
PAKCMHMK_01316 3.5e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAKCMHMK_01317 3.4e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
PAKCMHMK_01318 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
PAKCMHMK_01319 4.3e-217 EGP Major facilitator Superfamily
PAKCMHMK_01320 1.4e-264 glnA2 6.3.1.2 E glutamine synthetase
PAKCMHMK_01321 8.1e-279 S Uncharacterized protein conserved in bacteria (DUF2252)
PAKCMHMK_01322 8.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
PAKCMHMK_01323 9.1e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PAKCMHMK_01324 5e-99
PAKCMHMK_01325 2.7e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
PAKCMHMK_01326 1.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PAKCMHMK_01327 7.8e-255 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PAKCMHMK_01328 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
PAKCMHMK_01329 2.9e-156 yvgN 1.1.1.346 S Aldo/keto reductase family
PAKCMHMK_01330 0.0 2.4.1.230, 3.2.1.51 GH65,GH95 G Glycosyl hydrolase family 65, N-terminal domain
PAKCMHMK_01331 1.3e-165 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PAKCMHMK_01332 1.6e-154 S Amidohydrolase
PAKCMHMK_01333 7.4e-141 IQ KR domain
PAKCMHMK_01334 9e-167 4.2.1.68 M Enolase C-terminal domain-like
PAKCMHMK_01335 9.2e-10
PAKCMHMK_01336 0.0 4.2.1.53 S MCRA family
PAKCMHMK_01337 1.8e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
PAKCMHMK_01338 7.8e-35 yneG S Domain of unknown function (DUF4186)
PAKCMHMK_01339 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
PAKCMHMK_01340 8.4e-201 K WYL domain
PAKCMHMK_01341 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PAKCMHMK_01342 5.4e-90 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAKCMHMK_01343 5.3e-22 tccB2 V DivIVA protein
PAKCMHMK_01344 4.9e-45 yggT S YGGT family
PAKCMHMK_01345 3.4e-72 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAKCMHMK_01346 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAKCMHMK_01347 5.7e-249 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAKCMHMK_01348 3e-297 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
PAKCMHMK_01349 2.8e-123
PAKCMHMK_01350 1.3e-139 cbiO V ATPases associated with a variety of cellular activities
PAKCMHMK_01351 9.1e-105
PAKCMHMK_01352 5.3e-68 marR5 K Winged helix DNA-binding domain
PAKCMHMK_01353 2.8e-96
PAKCMHMK_01354 3.7e-163 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PAKCMHMK_01355 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PAKCMHMK_01356 1.7e-229 O AAA domain (Cdc48 subfamily)
PAKCMHMK_01357 4.6e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PAKCMHMK_01358 5.6e-62 S Thiamine-binding protein
PAKCMHMK_01359 6.9e-167 ydjK G Sugar (and other) transporter
PAKCMHMK_01360 1.6e-71 ydjK G Sugar (and other) transporter
PAKCMHMK_01361 8.1e-215 2.7.13.3 T Histidine kinase
PAKCMHMK_01362 6.1e-123 K helix_turn_helix, Lux Regulon
PAKCMHMK_01363 1.3e-190
PAKCMHMK_01364 5.4e-259 O SERine Proteinase INhibitors
PAKCMHMK_01365 1.8e-195 K helix_turn _helix lactose operon repressor
PAKCMHMK_01366 1.5e-97 M1-431 S Protein of unknown function (DUF1706)
PAKCMHMK_01367 9.3e-83 lacY P LacY proton/sugar symporter
PAKCMHMK_01368 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
PAKCMHMK_01369 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
PAKCMHMK_01370 1.8e-147 C Putative TM nitroreductase
PAKCMHMK_01371 6.4e-198 S Glycosyltransferase, group 2 family protein
PAKCMHMK_01372 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAKCMHMK_01373 0.0 ecfA GP ABC transporter, ATP-binding protein
PAKCMHMK_01374 3.1e-47 yhbY J CRS1_YhbY
PAKCMHMK_01375 1.4e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PAKCMHMK_01376 8.2e-53
PAKCMHMK_01377 2.5e-186 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PAKCMHMK_01378 4.2e-251 EGP Major facilitator Superfamily
PAKCMHMK_01379 2.3e-33 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PAKCMHMK_01380 6.9e-11 KT Transcriptional regulatory protein, C terminal
PAKCMHMK_01381 1.8e-251 rarA L Recombination factor protein RarA
PAKCMHMK_01382 0.0 helY L DEAD DEAH box helicase
PAKCMHMK_01383 4e-198 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
PAKCMHMK_01385 6.3e-287 ydfD EK Alanine-glyoxylate amino-transferase
PAKCMHMK_01386 6.6e-111 argO S LysE type translocator
PAKCMHMK_01387 9.2e-289 phoN I PAP2 superfamily
PAKCMHMK_01388 1e-193 gluD E Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01389 1.2e-110 gluC E Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01390 5.3e-147 gluB ET Belongs to the bacterial solute-binding protein 3 family
PAKCMHMK_01391 3.1e-153 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
PAKCMHMK_01392 6.1e-102 S Aminoacyl-tRNA editing domain
PAKCMHMK_01393 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PAKCMHMK_01394 5.9e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
PAKCMHMK_01395 1.7e-223 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
PAKCMHMK_01396 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
PAKCMHMK_01397 9.6e-59 lipA I Hydrolase, alpha beta domain protein
PAKCMHMK_01398 3e-132 xylE U Sugar (and other) transporter
PAKCMHMK_01399 3e-26 K helix_turn_helix, arabinose operon control protein
PAKCMHMK_01400 0.0 clpC O ATPase family associated with various cellular activities (AAA)
PAKCMHMK_01401 1.4e-178 uspA T Belongs to the universal stress protein A family
PAKCMHMK_01402 3.7e-180 S Protein of unknown function (DUF3027)
PAKCMHMK_01403 1.7e-66 cspB K 'Cold-shock' DNA-binding domain
PAKCMHMK_01404 2.3e-308 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAKCMHMK_01405 2e-132 KT Response regulator receiver domain protein
PAKCMHMK_01406 2.5e-99
PAKCMHMK_01407 4.2e-33 S Proteins of 100 residues with WXG
PAKCMHMK_01408 8e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAKCMHMK_01409 8.8e-37 K 'Cold-shock' DNA-binding domain
PAKCMHMK_01410 4.5e-83 S LytR cell envelope-related transcriptional attenuator
PAKCMHMK_01411 3.8e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAKCMHMK_01412 1.4e-187 moxR S ATPase family associated with various cellular activities (AAA)
PAKCMHMK_01413 1.1e-162 S Protein of unknown function DUF58
PAKCMHMK_01414 2.6e-84
PAKCMHMK_01415 9.7e-189 S von Willebrand factor (vWF) type A domain
PAKCMHMK_01416 1e-153 S von Willebrand factor (vWF) type A domain
PAKCMHMK_01417 3.1e-56
PAKCMHMK_01418 1.9e-257 S PGAP1-like protein
PAKCMHMK_01419 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
PAKCMHMK_01420 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
PAKCMHMK_01421 0.0 S Lysylphosphatidylglycerol synthase TM region
PAKCMHMK_01422 8.1e-42 hup L Belongs to the bacterial histone-like protein family
PAKCMHMK_01423 3.5e-285 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PAKCMHMK_01425 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
PAKCMHMK_01426 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
PAKCMHMK_01427 8.4e-136 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
PAKCMHMK_01428 1.7e-162 G Phosphotransferase System
PAKCMHMK_01429 2.1e-46 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PAKCMHMK_01430 1.8e-78 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAKCMHMK_01431 8.8e-72 H Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAKCMHMK_01432 3.8e-279 manR K PRD domain
PAKCMHMK_01433 1.4e-135 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAKCMHMK_01434 2.2e-285 arc O AAA ATPase forming ring-shaped complexes
PAKCMHMK_01435 7.7e-118 apl 3.1.3.1 S SNARE associated Golgi protein
PAKCMHMK_01436 6.6e-120 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
PAKCMHMK_01437 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAKCMHMK_01438 4.3e-132 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAKCMHMK_01439 9.3e-189 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAKCMHMK_01440 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
PAKCMHMK_01441 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAKCMHMK_01442 2.5e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAKCMHMK_01443 3.8e-138 L PFAM Integrase catalytic
PAKCMHMK_01444 3.6e-148 L IstB-like ATP binding protein
PAKCMHMK_01445 9.8e-296 L PFAM Integrase catalytic
PAKCMHMK_01446 6.1e-75 L PFAM Integrase catalytic
PAKCMHMK_01447 2.9e-134 L IstB-like ATP binding protein
PAKCMHMK_01448 1.5e-66 L HTH-like domain
PAKCMHMK_01449 3.2e-136 L PFAM Integrase catalytic
PAKCMHMK_01452 1.8e-36 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAKCMHMK_01453 1.3e-198 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAKCMHMK_01454 1.6e-131 cas4 3.1.12.1 L Domain of unknown function DUF83
PAKCMHMK_01455 8.7e-156 csd2 L CRISPR-associated protein Cas7
PAKCMHMK_01456 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
PAKCMHMK_01457 1.5e-137 cas5d S CRISPR-associated protein (Cas_Cas5)
PAKCMHMK_01458 0.0 cas3 L DEAD-like helicases superfamily
PAKCMHMK_01460 1.7e-44 L Transposase
PAKCMHMK_01461 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAKCMHMK_01462 1.3e-152 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAKCMHMK_01463 4.7e-162 dcuD C C4-dicarboxylate anaerobic carrier
PAKCMHMK_01464 2.6e-105 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PAKCMHMK_01465 2.4e-43 K acetyltransferase
PAKCMHMK_01466 2.3e-126 rbsR K helix_turn _helix lactose operon repressor
PAKCMHMK_01467 0.0 V ABC transporter transmembrane region
PAKCMHMK_01468 0.0 V ABC transporter, ATP-binding protein
PAKCMHMK_01469 1.2e-89 K MarR family
PAKCMHMK_01470 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PAKCMHMK_01471 1e-86 K Bacterial regulatory proteins, tetR family
PAKCMHMK_01472 4.4e-105 I Hydrolase, alpha beta domain protein
PAKCMHMK_01473 1.5e-247 S X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
PAKCMHMK_01474 7.6e-164 G Major Facilitator Superfamily
PAKCMHMK_01475 6.7e-73 K Bacterial regulatory proteins, tetR family
PAKCMHMK_01476 2.9e-39
PAKCMHMK_01477 5.2e-239 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PAKCMHMK_01478 2.6e-70 S Nucleotidyltransferase substrate binding protein like
PAKCMHMK_01479 1.2e-45 S Nucleotidyltransferase domain
PAKCMHMK_01480 4.1e-69 mgtC S MgtC family
PAKCMHMK_01481 7.1e-202 G Transporter major facilitator family protein
PAKCMHMK_01482 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
PAKCMHMK_01483 7.2e-218 EGP Major facilitator Superfamily
PAKCMHMK_01484 4.2e-139 K Periplasmic binding protein domain
PAKCMHMK_01485 3.1e-32 osmC O OsmC-like protein
PAKCMHMK_01486 6.6e-112 3.5.1.4 J Amidase
PAKCMHMK_01487 8.3e-142 3.4.13.22 S hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
PAKCMHMK_01488 7e-253 amyE G Bacterial extracellular solute-binding protein
PAKCMHMK_01489 2.3e-195 I Hydrolase, alpha beta domain protein
PAKCMHMK_01490 3e-47 L Transposase
PAKCMHMK_01491 4.9e-295 L PFAM Integrase catalytic
PAKCMHMK_01492 9.2e-144 L IstB-like ATP binding protein
PAKCMHMK_01493 4.8e-51 L Transposase DDE domain
PAKCMHMK_01494 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
PAKCMHMK_01495 6.6e-130 K Bacterial regulatory proteins, tetR family
PAKCMHMK_01496 2.7e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
PAKCMHMK_01497 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
PAKCMHMK_01498 6.5e-136 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAKCMHMK_01499 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
PAKCMHMK_01500 1.8e-256 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKCMHMK_01501 2.4e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKCMHMK_01502 4.6e-91 ywrO 1.6.5.2 S Flavodoxin-like fold
PAKCMHMK_01503 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PAKCMHMK_01504 3.2e-65 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAKCMHMK_01505 3.7e-78 F Nucleoside 2-deoxyribosyltransferase
PAKCMHMK_01507 1.6e-192 S Endonuclease/Exonuclease/phosphatase family
PAKCMHMK_01508 8.4e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PAKCMHMK_01509 6e-235 aspB E Aminotransferase class-V
PAKCMHMK_01510 8.5e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
PAKCMHMK_01511 7.4e-88 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PAKCMHMK_01512 1.2e-100 XK27_03610 K Acetyltransferase (GNAT) domain
PAKCMHMK_01513 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
PAKCMHMK_01514 4e-147 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PAKCMHMK_01515 2.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
PAKCMHMK_01516 6e-151 map 3.4.11.18 E Methionine aminopeptidase
PAKCMHMK_01517 1.5e-142 S Short repeat of unknown function (DUF308)
PAKCMHMK_01518 0.0 pepO 3.4.24.71 O Peptidase family M13
PAKCMHMK_01519 2.9e-114 L Single-strand binding protein family
PAKCMHMK_01520 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PAKCMHMK_01521 1.6e-100 pflA 1.97.1.4 O Radical SAM superfamily
PAKCMHMK_01522 1.2e-35 pflA 1.97.1.4 O Radical SAM superfamily
PAKCMHMK_01523 1.3e-268 recD2 3.6.4.12 L PIF1-like helicase
PAKCMHMK_01524 4.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PAKCMHMK_01525 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PAKCMHMK_01526 1.9e-212 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
PAKCMHMK_01527 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
PAKCMHMK_01528 6.6e-125 livF E ATPases associated with a variety of cellular activities
PAKCMHMK_01529 1.4e-161 E Branched-chain amino acid ATP-binding cassette transporter
PAKCMHMK_01530 1.7e-188 livM U Belongs to the binding-protein-dependent transport system permease family
PAKCMHMK_01531 3.5e-110 U Belongs to the binding-protein-dependent transport system permease family
PAKCMHMK_01532 3.7e-205 livK E Receptor family ligand binding region
PAKCMHMK_01533 2.9e-162 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAKCMHMK_01534 3.1e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAKCMHMK_01535 1.3e-36 rpmE J Binds the 23S rRNA
PAKCMHMK_01537 9.1e-50 yebQ EGP Major facilitator Superfamily
PAKCMHMK_01539 2.6e-146
PAKCMHMK_01540 1.5e-68 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PAKCMHMK_01541 6e-165 dkgB S Oxidoreductase, aldo keto reductase family protein
PAKCMHMK_01542 1.3e-19 lmrB U Major Facilitator Superfamily
PAKCMHMK_01543 6.9e-87 K Winged helix DNA-binding domain
PAKCMHMK_01544 7.2e-175 glkA 2.7.1.2 G ROK family
PAKCMHMK_01546 9e-309 EGP Major Facilitator Superfamily
PAKCMHMK_01547 0.0 yjjK S ATP-binding cassette protein, ChvD family
PAKCMHMK_01548 8.7e-170 tesB I Thioesterase-like superfamily
PAKCMHMK_01549 1.1e-92 S Protein of unknown function (DUF3180)
PAKCMHMK_01550 1.1e-303 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PAKCMHMK_01551 6.4e-162 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PAKCMHMK_01552 8.6e-119 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
PAKCMHMK_01553 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAKCMHMK_01554 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PAKCMHMK_01555 2.2e-210 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAKCMHMK_01556 1.9e-251 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
PAKCMHMK_01557 6.9e-298
PAKCMHMK_01558 1.5e-189 natA V ATPases associated with a variety of cellular activities
PAKCMHMK_01559 4.7e-235 epsG M Glycosyl transferase family 21
PAKCMHMK_01560 1.9e-281 S AI-2E family transporter
PAKCMHMK_01561 2.3e-178 3.4.14.13 M Glycosyltransferase like family 2
PAKCMHMK_01562 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
PAKCMHMK_01563 1.6e-262 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
PAKCMHMK_01566 9.9e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAKCMHMK_01568 9.4e-16 L Phage integrase family
PAKCMHMK_01569 4.3e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
PAKCMHMK_01570 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PAKCMHMK_01571 4.8e-185 lacR K Transcriptional regulator, LacI family
PAKCMHMK_01572 6.3e-22 L Helix-turn-helix domain
PAKCMHMK_01573 3.4e-255 G Bacterial extracellular solute-binding protein
PAKCMHMK_01574 9.1e-220 GK ROK family
PAKCMHMK_01575 7.4e-20 U Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01576 0.0 G Glycosyl hydrolase family 20, domain 2
PAKCMHMK_01577 6.7e-08 L HTH-like domain
PAKCMHMK_01578 8.9e-219 vex3 V ABC transporter permease
PAKCMHMK_01579 1.2e-209 vex1 V Efflux ABC transporter, permease protein
PAKCMHMK_01580 6.4e-111 vex2 V ABC transporter, ATP-binding protein
PAKCMHMK_01581 1.5e-97 ptpA 3.1.3.48 T low molecular weight
PAKCMHMK_01582 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
PAKCMHMK_01583 1e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAKCMHMK_01584 3.4e-73 attW O OsmC-like protein
PAKCMHMK_01585 1.5e-189 T Universal stress protein family
PAKCMHMK_01586 3.1e-101 M NlpC/P60 family
PAKCMHMK_01587 2.9e-99 M NlpC/P60 family
PAKCMHMK_01588 3.5e-169 usp 3.5.1.28 CBM50 S CHAP domain
PAKCMHMK_01589 7.9e-213 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PAKCMHMK_01590 3.1e-32
PAKCMHMK_01591 6e-174 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAKCMHMK_01592 5.4e-116 phoU P Plays a role in the regulation of phosphate uptake
PAKCMHMK_01593 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAKCMHMK_01594 7.3e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PAKCMHMK_01595 2.3e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PAKCMHMK_01597 1.3e-218 araJ EGP Major facilitator Superfamily
PAKCMHMK_01598 0.0 S Domain of unknown function (DUF4037)
PAKCMHMK_01599 2.9e-116 S Protein of unknown function (DUF4125)
PAKCMHMK_01600 0.0 S alpha beta
PAKCMHMK_01601 7.1e-58
PAKCMHMK_01602 2.6e-284 pspC KT PspC domain
PAKCMHMK_01603 3.2e-234 tcsS3 KT PspC domain
PAKCMHMK_01604 4.4e-118 degU K helix_turn_helix, Lux Regulon
PAKCMHMK_01605 4.1e-168 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAKCMHMK_01606 2.6e-205 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
PAKCMHMK_01607 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
PAKCMHMK_01608 2.5e-167 G ABC transporter permease
PAKCMHMK_01609 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01610 5.5e-250 G Bacterial extracellular solute-binding protein
PAKCMHMK_01612 1.1e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAKCMHMK_01613 8.9e-183 I Diacylglycerol kinase catalytic domain
PAKCMHMK_01614 1.3e-162 arbG K CAT RNA binding domain
PAKCMHMK_01615 2.3e-291 crr 2.7.1.193 G pts system, glucose-specific IIABC component
PAKCMHMK_01616 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PAKCMHMK_01617 8.9e-198 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PAKCMHMK_01618 3.6e-73 K Transcriptional regulator
PAKCMHMK_01619 2.7e-277 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PAKCMHMK_01620 1e-172 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKCMHMK_01621 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PAKCMHMK_01623 7.9e-98
PAKCMHMK_01624 3.9e-260 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAKCMHMK_01625 1.4e-217 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
PAKCMHMK_01626 2.7e-219 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAKCMHMK_01627 1.1e-81 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAKCMHMK_01628 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAKCMHMK_01629 2.2e-185 nusA K Participates in both transcription termination and antitermination
PAKCMHMK_01630 2.1e-126
PAKCMHMK_01631 1.9e-99 K helix_turn _helix lactose operon repressor
PAKCMHMK_01633 7.2e-152 E Transglutaminase/protease-like homologues
PAKCMHMK_01634 0.0 gcs2 S A circularly permuted ATPgrasp
PAKCMHMK_01635 3.3e-169 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAKCMHMK_01636 3.5e-62 rplQ J Ribosomal protein L17
PAKCMHMK_01637 7.5e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKCMHMK_01638 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAKCMHMK_01639 9.5e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAKCMHMK_01640 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PAKCMHMK_01641 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAKCMHMK_01642 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAKCMHMK_01643 6.9e-248 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAKCMHMK_01644 8.1e-76 rplO J binds to the 23S rRNA
PAKCMHMK_01645 7e-26 rpmD J Ribosomal protein L30p/L7e
PAKCMHMK_01646 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAKCMHMK_01647 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAKCMHMK_01648 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAKCMHMK_01649 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAKCMHMK_01650 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAKCMHMK_01651 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAKCMHMK_01652 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAKCMHMK_01653 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAKCMHMK_01654 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAKCMHMK_01655 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
PAKCMHMK_01656 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAKCMHMK_01657 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAKCMHMK_01658 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAKCMHMK_01659 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAKCMHMK_01660 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAKCMHMK_01661 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAKCMHMK_01662 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
PAKCMHMK_01663 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAKCMHMK_01664 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
PAKCMHMK_01665 8.2e-137 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
PAKCMHMK_01666 5.6e-145 ywiC S YwiC-like protein
PAKCMHMK_01667 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PAKCMHMK_01668 3.1e-170 rhaR_1 K helix_turn_helix, arabinose operon control protein
PAKCMHMK_01669 1.5e-194 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
PAKCMHMK_01670 2.7e-196 EGP Major facilitator Superfamily
PAKCMHMK_01671 2.3e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PAKCMHMK_01672 6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAKCMHMK_01673 2.2e-233 EGP Major facilitator Superfamily
PAKCMHMK_01674 1.9e-178 tdh 1.1.1.14 C Zinc-binding dehydrogenase
PAKCMHMK_01675 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PAKCMHMK_01676 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
PAKCMHMK_01677 1e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAKCMHMK_01678 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PAKCMHMK_01679 8.4e-117
PAKCMHMK_01680 3.4e-112 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
PAKCMHMK_01681 3.1e-184 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKCMHMK_01682 1.8e-117 M Bacterial capsule synthesis protein PGA_cap
PAKCMHMK_01683 6.3e-245 bglA 3.2.1.21 G Glycosyl hydrolase family 1
PAKCMHMK_01684 6.1e-160 U Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01685 5.5e-164 malC U Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01686 1.9e-242 malE G Bacterial extracellular solute-binding protein
PAKCMHMK_01687 1.4e-217 rbsR K helix_turn _helix lactose operon repressor
PAKCMHMK_01688 5.2e-22
PAKCMHMK_01690 6.9e-64 S EamA-like transporter family
PAKCMHMK_01691 8.7e-21 S EamA-like transporter family
PAKCMHMK_01692 1.5e-236 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAKCMHMK_01693 1e-223 dapC E Aminotransferase class I and II
PAKCMHMK_01694 2.9e-59 fdxA C 4Fe-4S binding domain
PAKCMHMK_01695 1.2e-269 E aromatic amino acid transport protein AroP K03293
PAKCMHMK_01696 9.1e-215 murB 1.3.1.98 M Cell wall formation
PAKCMHMK_01697 4.1e-25 rpmG J Ribosomal protein L33
PAKCMHMK_01701 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAKCMHMK_01702 1.1e-135
PAKCMHMK_01703 2.6e-85 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
PAKCMHMK_01704 1.9e-55 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
PAKCMHMK_01705 4.3e-31 fmdB S Putative regulatory protein
PAKCMHMK_01706 3.6e-106 flgA NO SAF
PAKCMHMK_01707 6.6e-19 L Superfamily I DNA and RNA helicases and helicase subunits
PAKCMHMK_01708 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
PAKCMHMK_01709 3.1e-192 T Forkhead associated domain
PAKCMHMK_01710 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAKCMHMK_01711 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAKCMHMK_01712 9e-147 3.2.1.8 S alpha beta
PAKCMHMK_01713 1.1e-251 pbuO S Permease family
PAKCMHMK_01714 2.1e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKCMHMK_01715 2.3e-171 pstA P Phosphate transport system permease
PAKCMHMK_01716 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
PAKCMHMK_01717 1.3e-202 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
PAKCMHMK_01718 3.8e-142 KT Transcriptional regulatory protein, C terminal
PAKCMHMK_01719 1.3e-206 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PAKCMHMK_01720 2.1e-241 EGP Sugar (and other) transporter
PAKCMHMK_01721 5.7e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAKCMHMK_01722 1.9e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PAKCMHMK_01723 4.8e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PAKCMHMK_01724 3.9e-267 pepC 3.4.22.40 E Peptidase C1-like family
PAKCMHMK_01725 3.6e-45 D nuclear chromosome segregation
PAKCMHMK_01726 2.6e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PAKCMHMK_01727 8.4e-151 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PAKCMHMK_01728 8e-199 yfiH Q Multi-copper polyphenol oxidoreductase laccase
PAKCMHMK_01729 8.1e-301 yegQ O Peptidase family U32 C-terminal domain
PAKCMHMK_01730 2.8e-179 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PAKCMHMK_01731 7.7e-103 rsmD 2.1.1.171 L Conserved hypothetical protein 95
PAKCMHMK_01732 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
PAKCMHMK_01733 2.5e-29 rpmB J Ribosomal L28 family
PAKCMHMK_01734 2.7e-196 yegV G pfkB family carbohydrate kinase
PAKCMHMK_01735 7.4e-239 yxiO S Vacuole effluxer Atg22 like
PAKCMHMK_01736 2.4e-81 soxR K helix_turn_helix, mercury resistance
PAKCMHMK_01737 1.5e-61 T Toxic component of a toxin-antitoxin (TA) module
PAKCMHMK_01738 8.1e-54 relB L RelB antitoxin
PAKCMHMK_01739 3e-24 yxiO G Major facilitator Superfamily
PAKCMHMK_01740 6.8e-182 K Helix-turn-helix XRE-family like proteins
PAKCMHMK_01741 1.2e-19
PAKCMHMK_01742 1.3e-62 S Alpha/beta hydrolase family
PAKCMHMK_01746 4.7e-16 EGP Major facilitator Superfamily
PAKCMHMK_01747 9.5e-46 XK27_04590 S NADPH-dependent FMN reductase
PAKCMHMK_01749 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
PAKCMHMK_01750 4.5e-294 pccB I Carboxyl transferase domain
PAKCMHMK_01751 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PAKCMHMK_01752 2.6e-90 bioY S BioY family
PAKCMHMK_01753 2.2e-163 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
PAKCMHMK_01754 0.0
PAKCMHMK_01755 7.1e-164 QT PucR C-terminal helix-turn-helix domain
PAKCMHMK_01756 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAKCMHMK_01757 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAKCMHMK_01758 2.5e-146 K Psort location Cytoplasmic, score
PAKCMHMK_01759 7e-110 nusG K Participates in transcription elongation, termination and antitermination
PAKCMHMK_01760 4.7e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAKCMHMK_01762 9.9e-230 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
PAKCMHMK_01763 8.5e-216 G polysaccharide deacetylase
PAKCMHMK_01764 8.3e-199 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAKCMHMK_01765 2.1e-310 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAKCMHMK_01766 5.8e-39 rpmA J Ribosomal L27 protein
PAKCMHMK_01767 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PAKCMHMK_01768 0.0 rne 3.1.26.12 J Ribonuclease E/G family
PAKCMHMK_01769 2.8e-232 dapE 3.5.1.18 E Peptidase dimerisation domain
PAKCMHMK_01770 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
PAKCMHMK_01771 2.8e-165 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PAKCMHMK_01772 3.2e-149 S Amidohydrolase
PAKCMHMK_01773 7e-202 fucP G Major Facilitator Superfamily
PAKCMHMK_01774 2.8e-148 IQ KR domain
PAKCMHMK_01775 1.1e-250 4.2.1.68 M Enolase C-terminal domain-like
PAKCMHMK_01776 1.2e-191 K Bacterial regulatory proteins, lacI family
PAKCMHMK_01777 3.7e-255 V Efflux ABC transporter, permease protein
PAKCMHMK_01778 3.7e-137 V ATPases associated with a variety of cellular activities
PAKCMHMK_01779 1.6e-28 S Protein of unknown function (DUF1778)
PAKCMHMK_01780 2e-91 K Acetyltransferase (GNAT) family
PAKCMHMK_01781 1.7e-276 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
PAKCMHMK_01782 2.7e-184 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PAKCMHMK_01783 1.8e-237 hom 1.1.1.3 E Homoserine dehydrogenase
PAKCMHMK_01784 4.3e-54 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
PAKCMHMK_01785 2.3e-55 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAKCMHMK_01786 5.9e-302 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAKCMHMK_01787 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PAKCMHMK_01788 2.6e-129 K Bacterial regulatory proteins, tetR family
PAKCMHMK_01789 7.2e-223 G Transmembrane secretion effector
PAKCMHMK_01790 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAKCMHMK_01791 1.2e-252 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
PAKCMHMK_01792 2.1e-157 ET Bacterial periplasmic substrate-binding proteins
PAKCMHMK_01793 3.7e-120 ytmL P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01794 4e-139 P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01795 1.3e-104 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
PAKCMHMK_01796 3.5e-132 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
PAKCMHMK_01797 2e-219 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
PAKCMHMK_01798 6.3e-21 2.7.13.3 T Histidine kinase
PAKCMHMK_01799 9.2e-18 S Bacterial PH domain
PAKCMHMK_01800 3.2e-132 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAKCMHMK_01801 6.5e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAKCMHMK_01802 1.4e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
PAKCMHMK_01803 7.6e-263 S Calcineurin-like phosphoesterase
PAKCMHMK_01804 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PAKCMHMK_01805 3e-233 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
PAKCMHMK_01806 4.2e-131
PAKCMHMK_01807 0.0 G N-terminal domain of (some) glycogen debranching enzymes
PAKCMHMK_01808 4.6e-49 P Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01809 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAKCMHMK_01810 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAKCMHMK_01811 2.8e-215 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PAKCMHMK_01812 6.7e-217 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAKCMHMK_01814 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAKCMHMK_01815 6.2e-163 S Auxin Efflux Carrier
PAKCMHMK_01816 1.8e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
PAKCMHMK_01817 1.2e-108 S Domain of unknown function (DUF4190)
PAKCMHMK_01818 5e-165
PAKCMHMK_01819 1.7e-234 glf 5.4.99.9 M UDP-galactopyranose mutase
PAKCMHMK_01820 2.8e-64 K Helix-turn-helix domain
PAKCMHMK_01822 1.5e-248 L PFAM Integrase catalytic
PAKCMHMK_01823 4.2e-45 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
PAKCMHMK_01824 2e-59 G Branched-chain amino acid transport system / permease component
PAKCMHMK_01825 5e-73 P branched-chain amino acid ABC transporter, permease protein
PAKCMHMK_01826 8.2e-120 G ATPases associated with a variety of cellular activities
PAKCMHMK_01827 1.3e-81 G ABC-type sugar transport system periplasmic component
PAKCMHMK_01828 8.6e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
PAKCMHMK_01829 4.2e-77 xylR GK ROK family
PAKCMHMK_01830 2.5e-119
PAKCMHMK_01831 5.9e-191 M Glycosyltransferase like family 2
PAKCMHMK_01832 2.5e-22 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PAKCMHMK_01833 7.9e-47 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PAKCMHMK_01834 5.2e-90 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PAKCMHMK_01835 6.9e-64 S Predicted membrane protein (DUF2142)
PAKCMHMK_01836 6.2e-145 L PFAM Integrase catalytic
PAKCMHMK_01838 2.2e-272 S Glucosyl transferase GtrII
PAKCMHMK_01839 5.8e-250 S Polysaccharide pyruvyl transferase
PAKCMHMK_01840 0.0 rgpF M Rhamnan synthesis protein F
PAKCMHMK_01841 1.7e-190 I Acyltransferase family
PAKCMHMK_01842 5.4e-172 1.1.1.339 GM NAD dependent epimerase/dehydratase family
PAKCMHMK_01843 2e-174 L PFAM Integrase catalytic
PAKCMHMK_01844 1.6e-63 L PFAM Integrase catalytic
PAKCMHMK_01845 3.8e-147 gtrB GT2 M Glycosyl transferase family 2
PAKCMHMK_01846 1e-229 rgpD 3.6.3.38, 3.6.3.40 GM ABC transporter, ATP-binding protein
PAKCMHMK_01847 2.7e-149 rgpC U Transport permease protein
PAKCMHMK_01848 7.9e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PAKCMHMK_01849 1.5e-261 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAKCMHMK_01850 1.1e-172 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAKCMHMK_01851 4.9e-228 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
PAKCMHMK_01852 1.6e-16
PAKCMHMK_01853 6.4e-188 K Cell envelope-related transcriptional attenuator domain
PAKCMHMK_01854 9.7e-256 V ABC transporter permease
PAKCMHMK_01855 6.6e-186 V ABC transporter
PAKCMHMK_01856 3.1e-144 T HD domain
PAKCMHMK_01857 1.8e-159 S Glutamine amidotransferase domain
PAKCMHMK_01858 0.0 kup P Transport of potassium into the cell
PAKCMHMK_01859 3.1e-186 tatD L TatD related DNase
PAKCMHMK_01860 0.0 yknV V ABC transporter
PAKCMHMK_01861 0.0 mdlA2 V ABC transporter
PAKCMHMK_01862 2.3e-23 S ATPase domain predominantly from Archaea
PAKCMHMK_01863 7e-253 S Domain of unknown function (DUF4143)
PAKCMHMK_01864 1.5e-193 G Glycosyl hydrolases family 43
PAKCMHMK_01865 1.1e-153 U Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01866 5.9e-177 U Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01867 1.2e-241 G Bacterial extracellular solute-binding protein
PAKCMHMK_01868 3.4e-194 K helix_turn _helix lactose operon repressor
PAKCMHMK_01869 0.0 lacZ 3.2.1.23 G Beta-galactosidase trimerisation domain
PAKCMHMK_01870 1.6e-268 S AAA domain
PAKCMHMK_01871 4e-34 EGP Major facilitator Superfamily
PAKCMHMK_01872 5.7e-21 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
PAKCMHMK_01873 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PAKCMHMK_01874 0.0 oppD P Belongs to the ABC transporter superfamily
PAKCMHMK_01875 1.2e-172 dppC EP N-terminal TM domain of oligopeptide transport permease C
PAKCMHMK_01876 1e-176 appB EP Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01877 3.8e-279 pepC 3.4.22.40 E Peptidase C1-like family
PAKCMHMK_01878 6.7e-47
PAKCMHMK_01879 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAKCMHMK_01880 9.4e-121
PAKCMHMK_01881 4.6e-180 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKCMHMK_01883 4.2e-256 G MFS/sugar transport protein
PAKCMHMK_01884 5.1e-181 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAKCMHMK_01885 0.0 lmrA2 V ABC transporter transmembrane region
PAKCMHMK_01886 0.0 lmrA1 V ABC transporter, ATP-binding protein
PAKCMHMK_01887 3.9e-90 ydgJ K helix_turn_helix multiple antibiotic resistance protein
PAKCMHMK_01888 2.2e-279 cycA E Amino acid permease
PAKCMHMK_01889 0.0 V FtsX-like permease family
PAKCMHMK_01890 7.5e-129 V ABC transporter
PAKCMHMK_01891 1.7e-268 aroP E aromatic amino acid transport protein AroP K03293
PAKCMHMK_01892 1.7e-105 S Protein of unknown function, DUF624
PAKCMHMK_01893 6.8e-153 rafG G ABC transporter permease
PAKCMHMK_01894 9.7e-147 malC G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01895 3.7e-185 K Psort location Cytoplasmic, score
PAKCMHMK_01896 7.1e-253 amyE G Bacterial extracellular solute-binding protein
PAKCMHMK_01897 3.6e-102 G Phosphoglycerate mutase family
PAKCMHMK_01898 4.4e-59 S Protein of unknown function (DUF4235)
PAKCMHMK_01899 2.5e-138 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
PAKCMHMK_01900 0.0 pip S YhgE Pip domain protein
PAKCMHMK_01901 7.7e-279 pip S YhgE Pip domain protein
PAKCMHMK_01902 1.8e-40
PAKCMHMK_01903 3.1e-15 S COG NOG14600 non supervised orthologous group
PAKCMHMK_01904 9.2e-10
PAKCMHMK_01905 4.9e-142 cobB2 K Sir2 family
PAKCMHMK_01906 5.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
PAKCMHMK_01907 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PAKCMHMK_01908 2.9e-154 G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01909 1.2e-140 malC G Binding-protein-dependent transport system inner membrane component
PAKCMHMK_01910 2.3e-245 msmE7 G Bacterial extracellular solute-binding protein
PAKCMHMK_01911 1.2e-230 nagC GK ROK family
PAKCMHMK_01912 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
PAKCMHMK_01913 8.3e-78 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAKCMHMK_01914 0.0 yjcE P Sodium/hydrogen exchanger family
PAKCMHMK_01915 2.5e-120 S membrane transporter protein
PAKCMHMK_01916 8.1e-145 ypfH S Phospholipase/Carboxylesterase
PAKCMHMK_01917 1e-151
PAKCMHMK_01918 9e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
PAKCMHMK_01919 1.2e-37
PAKCMHMK_01920 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
PAKCMHMK_01921 2e-16 K helix_turn _helix lactose operon repressor
PAKCMHMK_01922 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAKCMHMK_01923 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
PAKCMHMK_01924 3.5e-206 EGP Major facilitator Superfamily
PAKCMHMK_01925 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKCMHMK_01926 5.9e-168 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PAKCMHMK_01927 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PAKCMHMK_01928 1.6e-271 KLT Domain of unknown function (DUF4032)
PAKCMHMK_01929 4.4e-155
PAKCMHMK_01930 7.6e-18 tnp7109-21 L Integrase core domain
PAKCMHMK_01931 1.1e-131 K helix_turn _helix lactose operon repressor
PAKCMHMK_01932 4.2e-146 G Periplasmic binding protein domain
PAKCMHMK_01933 8.7e-178 3.6.3.17 G ATPases associated with a variety of cellular activities
PAKCMHMK_01934 5e-142 U Branched-chain amino acid transport system / permease component
PAKCMHMK_01935 1e-185
PAKCMHMK_01936 1.2e-146 tnp3514b L Winged helix-turn helix
PAKCMHMK_01937 6.2e-48 S LPXTG-motif cell wall anchor domain protein
PAKCMHMK_01938 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
PAKCMHMK_01939 6e-137 K UTRA domain
PAKCMHMK_01940 4.9e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PAKCMHMK_01941 3.7e-45 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PAKCMHMK_01942 2.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAKCMHMK_01943 3.6e-221 2.4.1.166 GT2 M Glycosyltransferase like family 2
PAKCMHMK_01944 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKCMHMK_01946 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKCMHMK_01947 2.1e-88 nrdI F Probably involved in ribonucleotide reductase function
PAKCMHMK_01948 7e-43 nrdH O Glutaredoxin
PAKCMHMK_01949 2.8e-122 S Psort location CytoplasmicMembrane, score
PAKCMHMK_01950 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PAKCMHMK_01951 8.5e-119 K Helix-turn-helix XRE-family like proteins
PAKCMHMK_01952 2.5e-27 T LytTr DNA-binding domain
PAKCMHMK_01953 8.8e-34 T LytTr DNA-binding domain
PAKCMHMK_01954 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
PAKCMHMK_01955 0.0 KLT Protein tyrosine kinase
PAKCMHMK_01956 3e-136 O Thioredoxin
PAKCMHMK_01958 1.3e-215 S G5
PAKCMHMK_01959 1.9e-167 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAKCMHMK_01960 1.5e-177 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PAKCMHMK_01961 4.8e-111 S LytR cell envelope-related transcriptional attenuator
PAKCMHMK_01962 3.2e-283 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
PAKCMHMK_01963 2.8e-166 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
PAKCMHMK_01964 0.0
PAKCMHMK_01965 0.0 murJ KLT MviN-like protein
PAKCMHMK_01966 1.2e-175 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAKCMHMK_01967 8e-222 parB K Belongs to the ParB family
PAKCMHMK_01968 4.7e-174 parA D CobQ CobB MinD ParA nucleotide binding domain protein
PAKCMHMK_01969 1.2e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PAKCMHMK_01970 3e-93 jag S Putative single-stranded nucleic acids-binding domain
PAKCMHMK_01971 2.2e-182 yidC U Membrane protein insertase, YidC Oxa1 family
PAKCMHMK_01972 1.6e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAKCMHMK_01973 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)