ORF_ID e_value Gene_name EC_number CAZy COGs Description
EMFIIPJN_00001 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EMFIIPJN_00002 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
EMFIIPJN_00003 8.4e-202 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EMFIIPJN_00004 4.2e-83 S Protein of unknown function (DUF721)
EMFIIPJN_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EMFIIPJN_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EMFIIPJN_00007 8.4e-51 S Transmembrane domain of unknown function (DUF3566)
EMFIIPJN_00008 2.6e-183 lacR K Transcriptional regulator, LacI family
EMFIIPJN_00009 2.9e-16 lacS G Psort location CytoplasmicMembrane, score 10.00
EMFIIPJN_00010 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
EMFIIPJN_00011 1.1e-206 V VanZ like family
EMFIIPJN_00013 1.1e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
EMFIIPJN_00014 5.3e-197 S Psort location CytoplasmicMembrane, score
EMFIIPJN_00017 1.3e-122 S Protein of unknown function DUF45
EMFIIPJN_00019 5.1e-256 S Domain of unknown function (DUF4143)
EMFIIPJN_00020 1.6e-82 dps P Belongs to the Dps family
EMFIIPJN_00021 7.2e-117 L Transposase and inactivated derivatives IS30 family
EMFIIPJN_00022 1.1e-88 amyE G Bacterial extracellular solute-binding protein
EMFIIPJN_00023 1e-114 S Protein of unknown function, DUF624
EMFIIPJN_00024 3.8e-201 K Periplasmic binding protein domain
EMFIIPJN_00025 2.1e-292 3.2.1.26 GH32 G Glycosyl hydrolases family 32
EMFIIPJN_00026 5.9e-252 amyE G Bacterial extracellular solute-binding protein
EMFIIPJN_00027 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
EMFIIPJN_00028 3e-187 K Psort location Cytoplasmic, score
EMFIIPJN_00029 4.5e-213 L Transposase and inactivated derivatives IS30 family
EMFIIPJN_00030 1e-147 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
EMFIIPJN_00031 4.1e-52 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
EMFIIPJN_00032 7e-75 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
EMFIIPJN_00033 5.8e-152 rafG G ABC transporter permease
EMFIIPJN_00034 4.2e-150 malC G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00035 1.5e-30 K Psort location Cytoplasmic, score
EMFIIPJN_00036 6.9e-72 K Psort location Cytoplasmic, score
EMFIIPJN_00037 2e-76 amyE G Bacterial extracellular solute-binding protein
EMFIIPJN_00038 3.6e-116 amyE G Bacterial extracellular solute-binding protein
EMFIIPJN_00040 5.9e-229 M Protein of unknown function (DUF2961)
EMFIIPJN_00041 3e-254 amyE G Bacterial extracellular solute-binding protein
EMFIIPJN_00042 8.9e-187 K Periplasmic binding protein-like domain
EMFIIPJN_00043 1.5e-266 amyE G Bacterial extracellular solute-binding protein
EMFIIPJN_00044 5.6e-83 dps P Belongs to the Dps family
EMFIIPJN_00045 1.1e-232 ytfL P Transporter associated domain
EMFIIPJN_00046 2.5e-206 S AAA ATPase domain
EMFIIPJN_00047 2.8e-120 cah 4.2.1.1 P Reversible hydration of carbon dioxide
EMFIIPJN_00048 1e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
EMFIIPJN_00049 0.0 trxB2 1.8.1.9 C Thioredoxin domain
EMFIIPJN_00050 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
EMFIIPJN_00051 8.5e-165
EMFIIPJN_00052 8.8e-102 S Uncharacterised protein conserved in bacteria (DUF2194)
EMFIIPJN_00053 1.9e-209 S Uncharacterised protein conserved in bacteria (DUF2194)
EMFIIPJN_00054 1e-281 pelF GT4 M Domain of unknown function (DUF3492)
EMFIIPJN_00055 8.1e-285 pelG S Putative exopolysaccharide Exporter (EPS-E)
EMFIIPJN_00056 0.0 cotH M CotH kinase protein
EMFIIPJN_00057 4.1e-158 P VTC domain
EMFIIPJN_00058 8.5e-111 S Domain of unknown function (DUF4956)
EMFIIPJN_00059 0.0 yliE T Putative diguanylate phosphodiesterase
EMFIIPJN_00060 2.9e-125 S AAA domain
EMFIIPJN_00061 1.1e-310 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
EMFIIPJN_00062 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
EMFIIPJN_00063 0.0 yjjP S Threonine/Serine exporter, ThrE
EMFIIPJN_00064 2.8e-299 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EMFIIPJN_00065 1.3e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
EMFIIPJN_00066 1.9e-297 S Amidohydrolase family
EMFIIPJN_00067 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
EMFIIPJN_00068 2.1e-40 S Protein of unknown function (DUF3073)
EMFIIPJN_00069 2.7e-112 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
EMFIIPJN_00070 4.9e-210 2.7.13.3 T Histidine kinase
EMFIIPJN_00071 3.7e-220 EGP Major Facilitator Superfamily
EMFIIPJN_00072 1.1e-71 I Sterol carrier protein
EMFIIPJN_00073 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
EMFIIPJN_00074 2.6e-35
EMFIIPJN_00075 7.9e-121 gluP 3.4.21.105 S Rhomboid family
EMFIIPJN_00076 2.6e-69 crgA D Involved in cell division
EMFIIPJN_00077 5.1e-118 S Bacterial protein of unknown function (DUF881)
EMFIIPJN_00078 6.6e-226 srtA 3.4.22.70 M Sortase family
EMFIIPJN_00079 3.4e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
EMFIIPJN_00080 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
EMFIIPJN_00081 5.7e-172 T Protein tyrosine kinase
EMFIIPJN_00082 1.1e-262 pbpA M penicillin-binding protein
EMFIIPJN_00083 6.9e-279 rodA D Belongs to the SEDS family
EMFIIPJN_00084 3.7e-272 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
EMFIIPJN_00085 2.1e-75 fhaB T Inner membrane component of T3SS, cytoplasmic domain
EMFIIPJN_00086 2e-129 fhaA T Protein of unknown function (DUF2662)
EMFIIPJN_00087 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
EMFIIPJN_00088 8.6e-213 pldB 3.1.1.5 I Serine aminopeptidase, S33
EMFIIPJN_00089 3.4e-91 hsp20 O Hsp20/alpha crystallin family
EMFIIPJN_00090 1.2e-177 yddG EG EamA-like transporter family
EMFIIPJN_00091 1.8e-26 S Polyketide cyclase / dehydrase and lipid transport
EMFIIPJN_00092 2.2e-23
EMFIIPJN_00093 4.3e-253 S Putative esterase
EMFIIPJN_00094 0.0 lysX S Uncharacterised conserved protein (DUF2156)
EMFIIPJN_00095 4.8e-201 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EMFIIPJN_00096 2e-132 S Pyridoxamine 5'-phosphate oxidase
EMFIIPJN_00097 3.2e-200 S Fic/DOC family
EMFIIPJN_00098 8.2e-164 M Glycosyltransferase like family 2
EMFIIPJN_00099 0.0 KL Domain of unknown function (DUF3427)
EMFIIPJN_00100 1.1e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
EMFIIPJN_00101 7.8e-52 ybjQ S Putative heavy-metal-binding
EMFIIPJN_00102 7e-145 yplQ S Haemolysin-III related
EMFIIPJN_00104 1e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
EMFIIPJN_00105 2.5e-259 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
EMFIIPJN_00106 0.0 cadA P E1-E2 ATPase
EMFIIPJN_00107 3.8e-276 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
EMFIIPJN_00108 1.5e-172 htpX O Belongs to the peptidase M48B family
EMFIIPJN_00110 3e-173 yicL EG EamA-like transporter family
EMFIIPJN_00111 6.1e-199 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
EMFIIPJN_00112 3.4e-252 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
EMFIIPJN_00113 1e-279 clcA P Voltage gated chloride channel
EMFIIPJN_00114 1.7e-129 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
EMFIIPJN_00115 4e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
EMFIIPJN_00116 7.2e-51 natB E Receptor family ligand binding region
EMFIIPJN_00117 2.4e-203 K helix_turn _helix lactose operon repressor
EMFIIPJN_00119 6.1e-301 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
EMFIIPJN_00120 1.2e-278 scrT G Transporter major facilitator family protein
EMFIIPJN_00121 8.2e-180 K helix_turn _helix lactose operon repressor
EMFIIPJN_00122 1.4e-251 yhjE EGP Sugar (and other) transporter
EMFIIPJN_00123 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
EMFIIPJN_00124 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
EMFIIPJN_00125 7.9e-131 S Psort location Cytoplasmic, score
EMFIIPJN_00126 2.9e-190 K Transcriptional regulator
EMFIIPJN_00127 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
EMFIIPJN_00128 1.4e-187 K Psort location Cytoplasmic, score
EMFIIPJN_00129 0.0 M cell wall anchor domain protein
EMFIIPJN_00130 0.0 M domain protein
EMFIIPJN_00131 1.6e-174 3.4.22.70 M Sortase family
EMFIIPJN_00132 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
EMFIIPJN_00133 3.2e-237 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
EMFIIPJN_00134 1.2e-233 malE G Bacterial extracellular solute-binding protein
EMFIIPJN_00135 5.1e-254 malF G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00136 5.2e-162 malG G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00137 9.5e-144 traX S TraX protein
EMFIIPJN_00138 1.1e-194 K Psort location Cytoplasmic, score
EMFIIPJN_00139 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
EMFIIPJN_00140 0.0 dnaK O Heat shock 70 kDa protein
EMFIIPJN_00141 3e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
EMFIIPJN_00142 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
EMFIIPJN_00143 1.2e-103 hspR K transcriptional regulator, MerR family
EMFIIPJN_00144 9e-17 F Psort location CytoplasmicMembrane, score 10.00
EMFIIPJN_00145 5.1e-115 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
EMFIIPJN_00146 2.4e-139 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
EMFIIPJN_00147 2.6e-126 S HAD hydrolase, family IA, variant 3
EMFIIPJN_00148 1.6e-134 dedA S SNARE associated Golgi protein
EMFIIPJN_00149 5.8e-125 cpaE D bacterial-type flagellum organization
EMFIIPJN_00150 2e-191 cpaF U Type II IV secretion system protein
EMFIIPJN_00151 1.2e-74 U Type ii secretion system
EMFIIPJN_00152 6.8e-116 gspF NU Type II secretion system (T2SS), protein F
EMFIIPJN_00153 3.2e-41 S Protein of unknown function (DUF4244)
EMFIIPJN_00154 1.4e-57 U TadE-like protein
EMFIIPJN_00155 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
EMFIIPJN_00156 7.9e-213 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
EMFIIPJN_00157 3.5e-95 K Bacterial regulatory proteins, tetR family
EMFIIPJN_00158 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
EMFIIPJN_00159 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
EMFIIPJN_00160 5.6e-196 3.4.22.70 M Sortase family
EMFIIPJN_00161 8e-40 V Abi-like protein
EMFIIPJN_00162 1.1e-189 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
EMFIIPJN_00163 1.1e-133 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
EMFIIPJN_00164 5.1e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
EMFIIPJN_00165 2.6e-213 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
EMFIIPJN_00166 9.6e-112
EMFIIPJN_00167 9.9e-174 L Domain of unknown function (DUF4862)
EMFIIPJN_00168 6.9e-168 2.7.1.2 GK ROK family
EMFIIPJN_00169 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
EMFIIPJN_00170 3.3e-160 3.5.1.106 I carboxylic ester hydrolase activity
EMFIIPJN_00171 5.1e-303 E Bacterial extracellular solute-binding proteins, family 5 Middle
EMFIIPJN_00172 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00173 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
EMFIIPJN_00174 1.7e-148 oppF E ATPases associated with a variety of cellular activities
EMFIIPJN_00175 2e-180 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
EMFIIPJN_00176 3.2e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
EMFIIPJN_00178 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
EMFIIPJN_00179 2.6e-244 P Domain of unknown function (DUF4143)
EMFIIPJN_00180 9e-153 K FCD
EMFIIPJN_00181 8.8e-273 S Calcineurin-like phosphoesterase
EMFIIPJN_00182 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
EMFIIPJN_00183 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
EMFIIPJN_00184 1.2e-165 3.6.1.27 I PAP2 superfamily
EMFIIPJN_00185 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EMFIIPJN_00186 3.1e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
EMFIIPJN_00187 5.1e-207 holB 2.7.7.7 L DNA polymerase III
EMFIIPJN_00188 1.4e-105 K helix_turn _helix lactose operon repressor
EMFIIPJN_00189 3.3e-37 ptsH G PTS HPr component phosphorylation site
EMFIIPJN_00191 7.8e-294 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EMFIIPJN_00192 1e-105 S Phosphatidylethanolamine-binding protein
EMFIIPJN_00193 0.0 pepD E Peptidase family C69
EMFIIPJN_00194 3.4e-288 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
EMFIIPJN_00195 3.3e-61 S Macrophage migration inhibitory factor (MIF)
EMFIIPJN_00196 8.4e-96 S GtrA-like protein
EMFIIPJN_00197 9.7e-248 EGP Major facilitator Superfamily
EMFIIPJN_00198 4.9e-122 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
EMFIIPJN_00199 2.4e-117
EMFIIPJN_00200 4.1e-228 3.1.1.31 G Lactonase, 7-bladed beta-propeller
EMFIIPJN_00201 2.2e-153 S Protein of unknown function (DUF805)
EMFIIPJN_00203 1e-292 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EMFIIPJN_00206 4.8e-64 L Phage integrase, N-terminal SAM-like domain
EMFIIPJN_00208 0.0 efeU_1 P Iron permease FTR1 family
EMFIIPJN_00209 2.8e-99 tpd P Fe2+ transport protein
EMFIIPJN_00210 5e-232 S Predicted membrane protein (DUF2318)
EMFIIPJN_00211 5e-227 macB_2 V ABC transporter permease
EMFIIPJN_00212 7.2e-200 Z012_06715 V FtsX-like permease family
EMFIIPJN_00213 4.5e-146 macB V ABC transporter, ATP-binding protein
EMFIIPJN_00214 1.7e-67 S FMN_bind
EMFIIPJN_00215 3.2e-101 K Psort location Cytoplasmic, score 8.87
EMFIIPJN_00217 8.9e-306 pip S YhgE Pip domain protein
EMFIIPJN_00218 0.0 pip S YhgE Pip domain protein
EMFIIPJN_00219 3e-138 S Putative ABC-transporter type IV
EMFIIPJN_00220 2.5e-250 L PFAM Integrase catalytic
EMFIIPJN_00221 1.8e-104 S Putative ABC-transporter type IV
EMFIIPJN_00222 7.4e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
EMFIIPJN_00223 1.3e-140 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
EMFIIPJN_00224 3.7e-193 opcA G Glucose-6-phosphate dehydrogenase subunit
EMFIIPJN_00225 7.8e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
EMFIIPJN_00226 1.5e-290 3.5.2.6 V Beta-lactamase enzyme family
EMFIIPJN_00228 2.3e-300 pepD E Peptidase family C69
EMFIIPJN_00229 3.3e-197 XK27_01805 M Glycosyltransferase like family 2
EMFIIPJN_00230 1.4e-150 icaR K Bacterial regulatory proteins, tetR family
EMFIIPJN_00231 1.4e-170 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
EMFIIPJN_00232 1e-227 amt U Ammonium Transporter Family
EMFIIPJN_00233 1e-54 glnB K Nitrogen regulatory protein P-II
EMFIIPJN_00234 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
EMFIIPJN_00235 7.8e-239 dinF V MatE
EMFIIPJN_00236 1.3e-252 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
EMFIIPJN_00237 9.5e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
EMFIIPJN_00238 3.5e-140 cobQ S CobB/CobQ-like glutamine amidotransferase domain
EMFIIPJN_00239 4.6e-37 S granule-associated protein
EMFIIPJN_00240 0.0 ubiB S ABC1 family
EMFIIPJN_00241 7.8e-62 K Periplasmic binding protein domain
EMFIIPJN_00242 1e-245 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
EMFIIPJN_00243 2.2e-154 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
EMFIIPJN_00244 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EMFIIPJN_00245 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
EMFIIPJN_00246 4e-76 ssb1 L Single-stranded DNA-binding protein
EMFIIPJN_00247 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
EMFIIPJN_00248 2.7e-71 rplI J Binds to the 23S rRNA
EMFIIPJN_00250 4e-117 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
EMFIIPJN_00251 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
EMFIIPJN_00252 3.3e-43 csoR S Metal-sensitive transcriptional repressor
EMFIIPJN_00253 1.6e-210 rmuC S RmuC family
EMFIIPJN_00254 3.7e-111 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
EMFIIPJN_00255 6.9e-170 spoU 2.1.1.185 J RNA methyltransferase TrmH family
EMFIIPJN_00256 1.9e-167 V ABC transporter
EMFIIPJN_00257 7.6e-178
EMFIIPJN_00258 8.7e-161 K Psort location Cytoplasmic, score
EMFIIPJN_00259 5.9e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EMFIIPJN_00260 3.9e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
EMFIIPJN_00261 7.4e-283 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EMFIIPJN_00262 4e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
EMFIIPJN_00263 3.3e-52 S Protein of unknown function (DUF2469)
EMFIIPJN_00264 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
EMFIIPJN_00265 2.7e-293 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
EMFIIPJN_00267 1.9e-37 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
EMFIIPJN_00268 1.1e-154 L Transposase
EMFIIPJN_00269 5.1e-50 K helix_turn_helix, arabinose operon control protein
EMFIIPJN_00270 2.6e-154 araN G Bacterial extracellular solute-binding protein
EMFIIPJN_00271 9.5e-121 lacF P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00272 1.3e-114 araQ U Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00273 2.1e-130 rafA 3.2.1.22 G alpha-galactosidase
EMFIIPJN_00274 1e-63 tyrA 5.4.99.5 E Chorismate mutase type II
EMFIIPJN_00275 0.0 S domain protein
EMFIIPJN_00276 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
EMFIIPJN_00277 2.1e-280 E Bacterial extracellular solute-binding proteins, family 5 Middle
EMFIIPJN_00278 1.9e-126 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EMFIIPJN_00279 1.2e-132 KT Transcriptional regulatory protein, C terminal
EMFIIPJN_00280 4.5e-81
EMFIIPJN_00281 1.6e-97 mntP P Probably functions as a manganese efflux pump
EMFIIPJN_00282 4e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
EMFIIPJN_00283 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
EMFIIPJN_00284 0.0 K RNA polymerase II activating transcription factor binding
EMFIIPJN_00286 1.6e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EMFIIPJN_00287 6.4e-148 atpB C it plays a direct role in the translocation of protons across the membrane
EMFIIPJN_00288 4.4e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EMFIIPJN_00289 1.4e-63 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
EMFIIPJN_00290 8.3e-151 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EMFIIPJN_00291 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
EMFIIPJN_00292 6.1e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
EMFIIPJN_00293 2.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
EMFIIPJN_00294 3.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
EMFIIPJN_00295 1.4e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
EMFIIPJN_00296 1.2e-158 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
EMFIIPJN_00297 9e-186
EMFIIPJN_00298 6.6e-179
EMFIIPJN_00299 1.7e-171 trxA2 O Tetratricopeptide repeat
EMFIIPJN_00300 6.9e-118 cyaA 4.6.1.1 S CYTH
EMFIIPJN_00303 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
EMFIIPJN_00304 4.3e-188 plsC2 2.3.1.51 I Phosphate acyltransferases
EMFIIPJN_00305 2.7e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
EMFIIPJN_00306 2.8e-229 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
EMFIIPJN_00307 9.9e-219 P Bacterial extracellular solute-binding protein
EMFIIPJN_00308 2.9e-160 U Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00309 6.9e-151 U Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00310 8.2e-238 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
EMFIIPJN_00311 1.1e-184 S CAAX protease self-immunity
EMFIIPJN_00312 1.7e-137 M Mechanosensitive ion channel
EMFIIPJN_00313 8.6e-273 aspA 4.3.1.1 E Fumarase C C-terminus
EMFIIPJN_00314 9.3e-11 L Transposase DDE domain
EMFIIPJN_00315 1.8e-134 S Sulfite exporter TauE/SafE
EMFIIPJN_00316 2.2e-234 aslB C Iron-sulfur cluster-binding domain
EMFIIPJN_00317 3.5e-194 K helix_turn _helix lactose operon repressor
EMFIIPJN_00318 6.1e-306 Z012_09690 P Domain of unknown function (DUF4976)
EMFIIPJN_00319 5.9e-263 G Bacterial extracellular solute-binding protein
EMFIIPJN_00320 2.9e-165 malC P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00321 3.5e-177 P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00322 5e-237 S AAA domain
EMFIIPJN_00323 3e-41 L Transposase, Mutator family
EMFIIPJN_00324 1.3e-106 K Bacterial regulatory proteins, tetR family
EMFIIPJN_00325 1.6e-249 MA20_36090 S Psort location Cytoplasmic, score 8.87
EMFIIPJN_00326 5e-87 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
EMFIIPJN_00327 6.8e-81 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
EMFIIPJN_00328 3.3e-71 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
EMFIIPJN_00329 8.4e-16 P Sodium/hydrogen exchanger family
EMFIIPJN_00331 1.1e-111
EMFIIPJN_00332 0.0 Q von Willebrand factor (vWF) type A domain
EMFIIPJN_00333 1.5e-278 M LPXTG cell wall anchor motif
EMFIIPJN_00335 4.2e-86
EMFIIPJN_00336 7.6e-110
EMFIIPJN_00337 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
EMFIIPJN_00338 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
EMFIIPJN_00339 1.3e-89 lemA S LemA family
EMFIIPJN_00340 0.0 S Predicted membrane protein (DUF2207)
EMFIIPJN_00341 3.2e-10 S Predicted membrane protein (DUF2207)
EMFIIPJN_00342 1.9e-138 S Predicted membrane protein (DUF2207)
EMFIIPJN_00343 8.4e-57 S Predicted membrane protein (DUF2207)
EMFIIPJN_00344 1.5e-19
EMFIIPJN_00345 3.7e-170 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
EMFIIPJN_00346 2.2e-201 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
EMFIIPJN_00347 6.4e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
EMFIIPJN_00348 1e-34 CP_0960 S Belongs to the UPF0109 family
EMFIIPJN_00349 1.2e-61 rpsP J Belongs to the bacterial ribosomal protein bS16 family
EMFIIPJN_00350 1.4e-213 S Endonuclease/Exonuclease/phosphatase family
EMFIIPJN_00351 2.1e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EMFIIPJN_00352 6.2e-160 P Cation efflux family
EMFIIPJN_00353 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
EMFIIPJN_00354 1.1e-135 guaA1 6.3.5.2 F Peptidase C26
EMFIIPJN_00355 0.0 yjjK S ABC transporter
EMFIIPJN_00356 2.1e-73 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
EMFIIPJN_00357 3.9e-44 stbC S Plasmid stability protein
EMFIIPJN_00358 4e-93 ilvN 2.2.1.6 E ACT domain
EMFIIPJN_00359 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
EMFIIPJN_00360 3.7e-134 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
EMFIIPJN_00361 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
EMFIIPJN_00362 7.6e-117 yceD S Uncharacterized ACR, COG1399
EMFIIPJN_00363 9.4e-72
EMFIIPJN_00364 5.1e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
EMFIIPJN_00365 3e-47 S Protein of unknown function (DUF3039)
EMFIIPJN_00366 2.3e-195 yghZ C Aldo/keto reductase family
EMFIIPJN_00367 6.3e-78 soxR K MerR, DNA binding
EMFIIPJN_00368 3.7e-119
EMFIIPJN_00369 3.2e-250 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
EMFIIPJN_00370 1.1e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
EMFIIPJN_00371 1.8e-136 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
EMFIIPJN_00372 1.4e-176 S Auxin Efflux Carrier
EMFIIPJN_00375 0.0 pgi 5.3.1.9 G Belongs to the GPI family
EMFIIPJN_00376 9.4e-264 abcT3 P ATPases associated with a variety of cellular activities
EMFIIPJN_00377 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00379 1.5e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
EMFIIPJN_00380 3.8e-165 lepB 3.4.21.89 U Belongs to the peptidase S26 family
EMFIIPJN_00381 1.4e-158 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
EMFIIPJN_00382 1.2e-210 K helix_turn _helix lactose operon repressor
EMFIIPJN_00383 2.2e-08 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
EMFIIPJN_00384 0.0 fadD 6.2.1.3 I AMP-binding enzyme
EMFIIPJN_00385 4.2e-40 araE EGP Major facilitator Superfamily
EMFIIPJN_00386 4.2e-19 araE EGP Major facilitator Superfamily
EMFIIPJN_00387 0.0 cydD V ABC transporter transmembrane region
EMFIIPJN_00388 5.1e-259 G Bacterial extracellular solute-binding protein
EMFIIPJN_00389 1.8e-170 malC G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00390 4.4e-167 G ABC transporter permease
EMFIIPJN_00391 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
EMFIIPJN_00392 4.4e-189 K helix_turn _helix lactose operon repressor
EMFIIPJN_00393 0.0 ganB 3.2.1.89 G Glycosyl hydrolase family 53
EMFIIPJN_00394 1.5e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
EMFIIPJN_00395 7.1e-141 L Protein of unknown function (DUF1524)
EMFIIPJN_00396 3.4e-231 mntH P H( )-stimulated, divalent metal cation uptake system
EMFIIPJN_00397 5.6e-281 EGP Major facilitator Superfamily
EMFIIPJN_00398 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
EMFIIPJN_00399 2.3e-235 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
EMFIIPJN_00400 9.7e-109 3.1.3.48 T Low molecular weight phosphatase family
EMFIIPJN_00401 4.6e-114 S Psort location CytoplasmicMembrane, score 9.99
EMFIIPJN_00403 1.2e-184 L Transposase and inactivated derivatives IS30 family
EMFIIPJN_00404 2e-139 M Psort location Cytoplasmic, score 8.87
EMFIIPJN_00405 1.7e-52 GT4 M Psort location Cytoplasmic, score 8.87
EMFIIPJN_00406 1.5e-07
EMFIIPJN_00407 8.9e-63 C Polysaccharide pyruvyl transferase
EMFIIPJN_00408 2.9e-119 S Psort location CytoplasmicMembrane, score 9.99
EMFIIPJN_00409 1.3e-46 M Glycosyltransferase like family 2
EMFIIPJN_00410 1.2e-178 menD 2.2.1.9 H Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
EMFIIPJN_00411 9e-71 L Transposase, Mutator family
EMFIIPJN_00412 1.1e-61 S enterobacterial common antigen metabolic process
EMFIIPJN_00413 1.5e-07 gumF G Fucose 4-O-acetylase and related acetyltransferases
EMFIIPJN_00414 8.3e-14 pslL G Acyltransferase family
EMFIIPJN_00415 8.8e-69 L Transposase, Mutator family
EMFIIPJN_00416 3.9e-07
EMFIIPJN_00418 1.4e-10 L HTH-like domain
EMFIIPJN_00419 5e-21 L PFAM Integrase catalytic
EMFIIPJN_00420 1.4e-86
EMFIIPJN_00421 6.8e-67
EMFIIPJN_00422 6.9e-56 L Transposase, Mutator family
EMFIIPJN_00423 5.7e-84 2.7.7.49 L Transposase, Mutator family
EMFIIPJN_00424 3.9e-30 L Transposase
EMFIIPJN_00425 4.5e-135 L IstB-like ATP binding protein
EMFIIPJN_00426 2.1e-105 L PFAM Integrase catalytic
EMFIIPJN_00427 2.8e-295 L PFAM Integrase catalytic
EMFIIPJN_00428 3.6e-148 L IstB-like ATP binding protein
EMFIIPJN_00429 1.1e-107 L PFAM Integrase catalytic
EMFIIPJN_00432 3.4e-53
EMFIIPJN_00433 3.3e-25 L Transposase and inactivated derivatives IS30 family
EMFIIPJN_00434 1.4e-08 L Transposase and inactivated derivatives IS30 family
EMFIIPJN_00435 3.4e-28 K NB-ARC domain
EMFIIPJN_00436 2.6e-44 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
EMFIIPJN_00439 2.3e-67 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
EMFIIPJN_00440 2.8e-295 L PFAM Integrase catalytic
EMFIIPJN_00441 3.6e-148 L IstB-like ATP binding protein
EMFIIPJN_00442 1.2e-80 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
EMFIIPJN_00444 4.1e-145 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
EMFIIPJN_00445 3.2e-28 V Abi-like protein
EMFIIPJN_00446 6e-27 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
EMFIIPJN_00448 1.6e-80 S RloB-like protein
EMFIIPJN_00449 4.3e-186 S AAA domain, putative AbiEii toxin, Type IV TA system
EMFIIPJN_00450 6.7e-21 S enterobacterial common antigen metabolic process
EMFIIPJN_00451 1e-10 L Helix-turn-helix domain
EMFIIPJN_00452 5.6e-261 S Psort location CytoplasmicMembrane, score 9.99
EMFIIPJN_00453 3.2e-69
EMFIIPJN_00454 1.9e-235 wcoI DM Psort location CytoplasmicMembrane, score
EMFIIPJN_00455 2.2e-164
EMFIIPJN_00456 8.8e-160 S G5
EMFIIPJN_00457 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
EMFIIPJN_00458 1.6e-120 F Domain of unknown function (DUF4916)
EMFIIPJN_00459 5.4e-158 mhpC I Alpha/beta hydrolase family
EMFIIPJN_00460 1.8e-213 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
EMFIIPJN_00461 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
EMFIIPJN_00462 2.7e-224 S Uncharacterized conserved protein (DUF2183)
EMFIIPJN_00463 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
EMFIIPJN_00464 5.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
EMFIIPJN_00465 3.7e-216 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
EMFIIPJN_00466 2.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
EMFIIPJN_00467 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
EMFIIPJN_00468 4.4e-231 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
EMFIIPJN_00469 1.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
EMFIIPJN_00470 2.8e-123 glpR K DeoR C terminal sensor domain
EMFIIPJN_00471 6.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
EMFIIPJN_00472 2e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
EMFIIPJN_00473 6.4e-44 gcvR T Belongs to the UPF0237 family
EMFIIPJN_00474 3.2e-253 S UPF0210 protein
EMFIIPJN_00475 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
EMFIIPJN_00476 1.2e-185 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
EMFIIPJN_00477 5.5e-101
EMFIIPJN_00478 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EMFIIPJN_00479 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EMFIIPJN_00480 0.0 E Transglutaminase-like superfamily
EMFIIPJN_00481 1.4e-237 S Protein of unknown function DUF58
EMFIIPJN_00482 0.0 S Fibronectin type 3 domain
EMFIIPJN_00483 2.3e-220 KLT Protein tyrosine kinase
EMFIIPJN_00484 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
EMFIIPJN_00485 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
EMFIIPJN_00486 4.3e-234 G Major Facilitator Superfamily
EMFIIPJN_00487 1.9e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
EMFIIPJN_00488 1.7e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EMFIIPJN_00489 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
EMFIIPJN_00490 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
EMFIIPJN_00491 5.6e-52 S Sulfite exporter TauE/SafE
EMFIIPJN_00492 3.4e-11 S Sulfite exporter TauE/SafE
EMFIIPJN_00493 1.2e-106 G Bacterial extracellular solute-binding protein
EMFIIPJN_00494 4.1e-108 malC P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00495 1.2e-116 P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00496 7.1e-132 bglA 3.2.1.21 G Glycosyl hydrolase family 1
EMFIIPJN_00497 4e-47 K PFAM helix-turn-helix- domain containing protein, AraC type
EMFIIPJN_00498 1.2e-56 S Sulfite exporter TauE/SafE
EMFIIPJN_00499 2e-258 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EMFIIPJN_00500 7.5e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
EMFIIPJN_00501 3.9e-265 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
EMFIIPJN_00502 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
EMFIIPJN_00503 6.9e-191 ftsE D Cell division ATP-binding protein FtsE
EMFIIPJN_00504 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
EMFIIPJN_00505 4.9e-145 usp 3.5.1.28 CBM50 D CHAP domain protein
EMFIIPJN_00506 6.3e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
EMFIIPJN_00507 2.1e-142 pknD ET ABC transporter, substrate-binding protein, family 3
EMFIIPJN_00508 1.7e-168 pknD ET ABC transporter, substrate-binding protein, family 3
EMFIIPJN_00509 4.7e-153 yecS E Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00510 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
EMFIIPJN_00511 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
EMFIIPJN_00512 1.8e-141 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
EMFIIPJN_00513 1.5e-186 K Periplasmic binding protein domain
EMFIIPJN_00514 1.8e-167 malC G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00515 1.5e-167 G ABC transporter permease
EMFIIPJN_00516 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
EMFIIPJN_00517 1.7e-259 G Bacterial extracellular solute-binding protein
EMFIIPJN_00518 1e-278 G Bacterial extracellular solute-binding protein
EMFIIPJN_00519 9.1e-144 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
EMFIIPJN_00520 1.2e-291 E ABC transporter, substrate-binding protein, family 5
EMFIIPJN_00521 8.2e-166 P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00522 1.1e-146 EP Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00523 5.5e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
EMFIIPJN_00524 2.4e-136 sapF E ATPases associated with a variety of cellular activities
EMFIIPJN_00525 3.1e-192 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
EMFIIPJN_00526 2.4e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
EMFIIPJN_00527 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
EMFIIPJN_00528 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
EMFIIPJN_00529 6.5e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EMFIIPJN_00530 1.7e-271 yhdG E aromatic amino acid transport protein AroP K03293
EMFIIPJN_00531 3.8e-262 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
EMFIIPJN_00532 3.1e-245 dgt 3.1.5.1 F Phosphohydrolase-associated domain
EMFIIPJN_00533 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
EMFIIPJN_00534 6.9e-69 S PIN domain
EMFIIPJN_00535 5.1e-34
EMFIIPJN_00536 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
EMFIIPJN_00537 5.6e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
EMFIIPJN_00538 2.6e-296 EK Alanine-glyoxylate amino-transferase
EMFIIPJN_00539 4.2e-209 ybiR P Citrate transporter
EMFIIPJN_00540 3.3e-30
EMFIIPJN_00541 7e-43 G Alpha-L-arabinofuranosidase C-terminal domain
EMFIIPJN_00542 8.6e-159 K Helix-turn-helix domain, rpiR family
EMFIIPJN_00545 3.6e-257 G Bacterial extracellular solute-binding protein
EMFIIPJN_00546 9.9e-225 K helix_turn _helix lactose operon repressor
EMFIIPJN_00547 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
EMFIIPJN_00548 4.5e-13 L Psort location Cytoplasmic, score 8.87
EMFIIPJN_00549 2.2e-311 E ABC transporter, substrate-binding protein, family 5
EMFIIPJN_00550 5.5e-86 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
EMFIIPJN_00551 1.2e-133 V ATPases associated with a variety of cellular activities
EMFIIPJN_00552 4.4e-175 M Conserved repeat domain
EMFIIPJN_00553 7.3e-278 macB_8 V MacB-like periplasmic core domain
EMFIIPJN_00554 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
EMFIIPJN_00555 2.4e-181 adh3 C Zinc-binding dehydrogenase
EMFIIPJN_00556 6.2e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
EMFIIPJN_00557 1.1e-222 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
EMFIIPJN_00558 1.2e-68 zur P Belongs to the Fur family
EMFIIPJN_00559 6.7e-85 ylbB V FtsX-like permease family
EMFIIPJN_00560 5.8e-28 ylbB V FtsX-like permease family
EMFIIPJN_00561 1.1e-70 XK27_06785 V ABC transporter
EMFIIPJN_00562 7.1e-64
EMFIIPJN_00563 8.7e-27 zur P Ferric uptake regulator family
EMFIIPJN_00564 2.3e-139 S TIGRFAM TIGR03943 family protein
EMFIIPJN_00565 6.1e-181 ycgR S Predicted permease
EMFIIPJN_00567 1e-154 P Zinc-uptake complex component A periplasmic
EMFIIPJN_00568 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
EMFIIPJN_00569 2.1e-296 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
EMFIIPJN_00570 9.1e-242 purD 6.3.4.13 F Belongs to the GARS family
EMFIIPJN_00571 1.1e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
EMFIIPJN_00572 1e-292 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
EMFIIPJN_00573 8.2e-296 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
EMFIIPJN_00574 5.4e-33
EMFIIPJN_00575 1.7e-12 C Aldo/keto reductase family
EMFIIPJN_00576 1.1e-102 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
EMFIIPJN_00577 2.4e-08 S Protein of unknown function (DUF4230)
EMFIIPJN_00580 1.5e-29 S Protein of unknown function (DUF4230)
EMFIIPJN_00581 1.9e-144
EMFIIPJN_00582 8.7e-82 Q D-alanine [D-alanyl carrier protein] ligase activity
EMFIIPJN_00583 9.1e-256 Q D-alanine [D-alanyl carrier protein] ligase activity
EMFIIPJN_00584 4.8e-222 I alpha/beta hydrolase fold
EMFIIPJN_00585 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
EMFIIPJN_00586 3.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
EMFIIPJN_00587 6.7e-224 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
EMFIIPJN_00588 8.7e-229 mtnE 2.6.1.83 E Aminotransferase class I and II
EMFIIPJN_00589 1.2e-219 M Glycosyl transferase 4-like domain
EMFIIPJN_00590 1.6e-196 ltaE 4.1.2.48 E Beta-eliminating lyase
EMFIIPJN_00592 6.6e-111 yocS S SBF-like CPA transporter family (DUF4137)
EMFIIPJN_00593 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
EMFIIPJN_00594 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
EMFIIPJN_00595 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
EMFIIPJN_00596 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EMFIIPJN_00597 3.5e-129 tmp1 S Domain of unknown function (DUF4391)
EMFIIPJN_00598 7.8e-146 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
EMFIIPJN_00599 2.7e-186 MA20_14895 S Conserved hypothetical protein 698
EMFIIPJN_00600 5e-30 S Psort location CytoplasmicMembrane, score
EMFIIPJN_00601 3.6e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
EMFIIPJN_00602 3.8e-88 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
EMFIIPJN_00603 4.4e-68 K MerR family regulatory protein
EMFIIPJN_00604 2.2e-193 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
EMFIIPJN_00605 1.4e-259 S Domain of unknown function (DUF4143)
EMFIIPJN_00606 9.9e-109 P Protein of unknown function DUF47
EMFIIPJN_00607 6.4e-170 ugpQ 3.1.4.46 C Domain of unknown function
EMFIIPJN_00608 2.6e-239 ugpB G Bacterial extracellular solute-binding protein
EMFIIPJN_00609 4e-142 ugpE G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00610 3.5e-164 ugpA P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00611 4.5e-161 P Phosphate transporter family
EMFIIPJN_00612 1.3e-190 K helix_turn _helix lactose operon repressor
EMFIIPJN_00613 4.7e-143 K LysR substrate binding domain
EMFIIPJN_00614 3.8e-101 K LysR substrate binding domain
EMFIIPJN_00615 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
EMFIIPJN_00616 3.3e-242 vbsD V MatE
EMFIIPJN_00617 3.2e-124 magIII L endonuclease III
EMFIIPJN_00619 5.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
EMFIIPJN_00620 1.5e-26 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
EMFIIPJN_00621 7.3e-184 S Membrane transport protein
EMFIIPJN_00622 1.2e-35 4.1.1.44 S Cupin domain
EMFIIPJN_00623 0.0 M probably involved in cell wall
EMFIIPJN_00624 9.1e-253 3.2.1.14 GH18 S Carbohydrate binding domain
EMFIIPJN_00625 0.0 T Diguanylate cyclase, GGDEF domain
EMFIIPJN_00626 3.2e-136 ybbM V Uncharacterised protein family (UPF0014)
EMFIIPJN_00627 4.5e-129 ybbL V ATPases associated with a variety of cellular activities
EMFIIPJN_00628 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
EMFIIPJN_00629 1.7e-93 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EMFIIPJN_00630 2.2e-240 carA 6.3.5.5 F Belongs to the CarA family
EMFIIPJN_00631 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
EMFIIPJN_00632 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
EMFIIPJN_00633 1.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
EMFIIPJN_00634 3.7e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
EMFIIPJN_00636 0.0 tetP J Elongation factor G, domain IV
EMFIIPJN_00637 1.9e-126 ypfH S Phospholipase/Carboxylesterase
EMFIIPJN_00638 4e-234 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
EMFIIPJN_00639 2.5e-42 XAC3035 O Glutaredoxin
EMFIIPJN_00640 1.8e-175 S Domain of unknown function (DUF4143)
EMFIIPJN_00641 3.7e-214 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
EMFIIPJN_00642 7.2e-116 XK27_08050 O prohibitin homologues
EMFIIPJN_00643 1.1e-58 S Domain of unknown function (DUF4143)
EMFIIPJN_00644 3.2e-158 S Patatin-like phospholipase
EMFIIPJN_00645 5.7e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
EMFIIPJN_00646 2.7e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
EMFIIPJN_00647 3.2e-127 S Vitamin K epoxide reductase
EMFIIPJN_00648 4.2e-169 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
EMFIIPJN_00649 7.2e-33 S Protein of unknown function (DUF3107)
EMFIIPJN_00650 1.3e-301 mphA S Aminoglycoside phosphotransferase
EMFIIPJN_00651 4e-292 uvrD2 3.6.4.12 L DNA helicase
EMFIIPJN_00652 3.9e-296 S Zincin-like metallopeptidase
EMFIIPJN_00653 1.5e-156 lon T Belongs to the peptidase S16 family
EMFIIPJN_00654 1.6e-73 S Protein of unknown function (DUF3052)
EMFIIPJN_00656 9.8e-209 2.7.11.1 NU Tfp pilus assembly protein FimV
EMFIIPJN_00657 3.7e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
EMFIIPJN_00658 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
EMFIIPJN_00659 0.0 I acetylesterase activity
EMFIIPJN_00660 1e-128 recO L Involved in DNA repair and RecF pathway recombination
EMFIIPJN_00661 6.9e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
EMFIIPJN_00662 4.5e-135 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00663 5.2e-190 P NMT1/THI5 like
EMFIIPJN_00664 1.8e-223 E Aminotransferase class I and II
EMFIIPJN_00665 1.1e-141 bioM P ATPases associated with a variety of cellular activities
EMFIIPJN_00667 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
EMFIIPJN_00668 0.0 S Tetratricopeptide repeat
EMFIIPJN_00669 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
EMFIIPJN_00670 6e-205 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
EMFIIPJN_00671 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
EMFIIPJN_00672 2.1e-143 S Domain of unknown function (DUF4191)
EMFIIPJN_00673 6e-277 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EMFIIPJN_00674 6.9e-102 S Protein of unknown function (DUF3043)
EMFIIPJN_00675 2.1e-260 argE E Peptidase dimerisation domain
EMFIIPJN_00676 1.8e-107 ykoE S ABC-type cobalt transport system, permease component
EMFIIPJN_00677 1.8e-273 ykoD P ATPases associated with a variety of cellular activities
EMFIIPJN_00678 2.5e-164 cbiQ P Cobalt transport protein
EMFIIPJN_00679 6e-160 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EMFIIPJN_00680 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
EMFIIPJN_00681 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
EMFIIPJN_00682 8.4e-90
EMFIIPJN_00683 1.3e-204 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
EMFIIPJN_00684 7e-212 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
EMFIIPJN_00685 1.1e-178 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
EMFIIPJN_00686 3e-248 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
EMFIIPJN_00687 8.6e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
EMFIIPJN_00688 5.9e-83 argR K Regulates arginine biosynthesis genes
EMFIIPJN_00689 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
EMFIIPJN_00690 4.4e-47 L PFAM Integrase catalytic
EMFIIPJN_00691 3.6e-148 L IstB-like ATP binding protein
EMFIIPJN_00692 2.8e-295 L PFAM Integrase catalytic
EMFIIPJN_00693 8.5e-44 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
EMFIIPJN_00694 2.4e-32 relB L RelB antitoxin
EMFIIPJN_00695 3e-281 argH 4.3.2.1 E argininosuccinate lyase
EMFIIPJN_00696 3e-27 thiS 2.8.1.10 H ThiS family
EMFIIPJN_00697 1.8e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
EMFIIPJN_00698 4.6e-146 moeB 2.7.7.80 H ThiF family
EMFIIPJN_00699 3.3e-64 M1-798 P Rhodanese Homology Domain
EMFIIPJN_00700 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
EMFIIPJN_00701 2.5e-138 S Putative ABC-transporter type IV
EMFIIPJN_00702 5.1e-298 S Protein of unknown function (DUF975)
EMFIIPJN_00703 9.8e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EMFIIPJN_00704 1.1e-166 L Tetratricopeptide repeat
EMFIIPJN_00705 9.3e-200 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
EMFIIPJN_00707 1.4e-139 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
EMFIIPJN_00708 4.7e-96
EMFIIPJN_00709 1.3e-49 trkA P TrkA-N domain
EMFIIPJN_00710 1.9e-41 trkB P Cation transport protein
EMFIIPJN_00711 1.9e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
EMFIIPJN_00712 0.0 recN L May be involved in recombinational repair of damaged DNA
EMFIIPJN_00713 2.7e-117 S Haloacid dehalogenase-like hydrolase
EMFIIPJN_00714 2.4e-55 J Acetyltransferase (GNAT) domain
EMFIIPJN_00715 1.6e-56 K helix_turn_helix gluconate operon transcriptional repressor
EMFIIPJN_00716 4.2e-172 V ATPases associated with a variety of cellular activities
EMFIIPJN_00717 3.8e-120 S ABC-2 family transporter protein
EMFIIPJN_00718 4.7e-71 S ABC-2 family transporter protein
EMFIIPJN_00719 3e-284 thrC 4.2.3.1 E Threonine synthase N terminus
EMFIIPJN_00720 2e-236 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
EMFIIPJN_00721 2.7e-97
EMFIIPJN_00722 9.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
EMFIIPJN_00723 9.7e-92 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
EMFIIPJN_00724 8.5e-23 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
EMFIIPJN_00725 0.0 S Uncharacterised protein family (UPF0182)
EMFIIPJN_00726 4.1e-93 2.3.1.183 M Acetyltransferase (GNAT) domain
EMFIIPJN_00727 1.5e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
EMFIIPJN_00728 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EMFIIPJN_00729 2.8e-168 1.1.1.65 C Aldo/keto reductase family
EMFIIPJN_00730 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
EMFIIPJN_00731 6.6e-70 divIC D Septum formation initiator
EMFIIPJN_00732 1.3e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
EMFIIPJN_00733 2.9e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
EMFIIPJN_00735 2.9e-94
EMFIIPJN_00736 1e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
EMFIIPJN_00737 4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
EMFIIPJN_00738 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
EMFIIPJN_00739 1.2e-145 yplQ S Haemolysin-III related
EMFIIPJN_00740 7.5e-280 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
EMFIIPJN_00741 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
EMFIIPJN_00742 0.0 D FtsK/SpoIIIE family
EMFIIPJN_00743 6.5e-206 K Cell envelope-related transcriptional attenuator domain
EMFIIPJN_00744 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
EMFIIPJN_00745 0.0 S Glycosyl transferase, family 2
EMFIIPJN_00746 2.5e-262
EMFIIPJN_00747 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
EMFIIPJN_00748 7.7e-146 cof 5.2.1.8 T Eukaryotic phosphomannomutase
EMFIIPJN_00749 4.6e-126 ctsW S Phosphoribosyl transferase domain
EMFIIPJN_00750 4.4e-197 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
EMFIIPJN_00751 5e-128 T Response regulator receiver domain protein
EMFIIPJN_00752 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
EMFIIPJN_00753 2.1e-100 carD K CarD-like/TRCF domain
EMFIIPJN_00754 6.8e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
EMFIIPJN_00755 2.6e-136 znuB U ABC 3 transport family
EMFIIPJN_00756 2.4e-161 znuC P ATPases associated with a variety of cellular activities
EMFIIPJN_00757 1.6e-184 P Zinc-uptake complex component A periplasmic
EMFIIPJN_00758 5.8e-163 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
EMFIIPJN_00759 3.2e-254 rpsA J Ribosomal protein S1
EMFIIPJN_00760 3.8e-106 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
EMFIIPJN_00761 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
EMFIIPJN_00762 2.1e-177 terC P Integral membrane protein, TerC family
EMFIIPJN_00763 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
EMFIIPJN_00764 1.1e-109 aspA 3.6.1.13 L NUDIX domain
EMFIIPJN_00766 2.8e-124 pdtaR T Response regulator receiver domain protein
EMFIIPJN_00767 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EMFIIPJN_00768 5.1e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
EMFIIPJN_00769 4e-127 3.6.1.13 L NUDIX domain
EMFIIPJN_00770 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
EMFIIPJN_00771 3.9e-12 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
EMFIIPJN_00772 1.1e-89 K Putative zinc ribbon domain
EMFIIPJN_00773 2.1e-125 S GyrI-like small molecule binding domain
EMFIIPJN_00774 5.6e-21 tag 3.2.2.20 L Methyladenine glycosylase
EMFIIPJN_00776 7e-104 L Resolvase, N terminal domain
EMFIIPJN_00777 2.8e-185 L Helix-turn-helix domain
EMFIIPJN_00778 4.8e-108
EMFIIPJN_00779 1.9e-214 ykiI
EMFIIPJN_00780 3e-251 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
EMFIIPJN_00781 1.4e-231 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
EMFIIPJN_00782 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
EMFIIPJN_00784 1.9e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EMFIIPJN_00785 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
EMFIIPJN_00786 1.3e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
EMFIIPJN_00787 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
EMFIIPJN_00788 1.7e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
EMFIIPJN_00789 6.5e-66 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
EMFIIPJN_00790 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
EMFIIPJN_00793 1.4e-156 S Sucrose-6F-phosphate phosphohydrolase
EMFIIPJN_00794 2.7e-177 metQ P NLPA lipoprotein
EMFIIPJN_00795 3.2e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EMFIIPJN_00796 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00797 3.7e-226 S Peptidase dimerisation domain
EMFIIPJN_00798 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EMFIIPJN_00799 2.6e-38
EMFIIPJN_00800 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
EMFIIPJN_00801 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EMFIIPJN_00802 8.3e-119 S Protein of unknown function (DUF3000)
EMFIIPJN_00803 4.5e-252 rnd 3.1.13.5 J 3'-5' exonuclease
EMFIIPJN_00804 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
EMFIIPJN_00805 1.7e-244 clcA_2 P Voltage gated chloride channel
EMFIIPJN_00806 2e-59
EMFIIPJN_00807 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
EMFIIPJN_00808 1.1e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
EMFIIPJN_00809 4.7e-252 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
EMFIIPJN_00812 5.1e-242 patB 4.4.1.8 E Aminotransferase, class I II
EMFIIPJN_00813 3.3e-237 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
EMFIIPJN_00814 1.6e-168 fmt2 3.2.2.10 S Belongs to the LOG family
EMFIIPJN_00815 1.9e-113 safC S O-methyltransferase
EMFIIPJN_00816 1.1e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
EMFIIPJN_00817 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
EMFIIPJN_00818 2.2e-311 dprA 5.99.1.2 LU DNA recombination-mediator protein A
EMFIIPJN_00819 1.5e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
EMFIIPJN_00820 3.1e-74 yraN L Belongs to the UPF0102 family
EMFIIPJN_00821 1.6e-23 L Transposase and inactivated derivatives IS30 family
EMFIIPJN_00822 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
EMFIIPJN_00823 4.5e-252 metY 2.5.1.49 E Aminotransferase class-V
EMFIIPJN_00824 1.6e-166 V ABC transporter, ATP-binding protein
EMFIIPJN_00825 0.0 MV MacB-like periplasmic core domain
EMFIIPJN_00826 2.9e-140 K helix_turn_helix, Lux Regulon
EMFIIPJN_00827 0.0 tcsS2 T Histidine kinase
EMFIIPJN_00828 4.1e-294 pip 3.4.11.5 S alpha/beta hydrolase fold
EMFIIPJN_00829 1.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
EMFIIPJN_00830 9.6e-155 cjaA ET Bacterial periplasmic substrate-binding proteins
EMFIIPJN_00831 5.8e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
EMFIIPJN_00832 1.2e-118 E Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00833 2.1e-109 papP E Binding-protein-dependent transport system inner membrane component
EMFIIPJN_00834 1.3e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
EMFIIPJN_00835 1.4e-123 insK L Integrase core domain
EMFIIPJN_00836 1.9e-66 L Helix-turn-helix domain
EMFIIPJN_00837 3.7e-243 S HipA-like C-terminal domain
EMFIIPJN_00838 2.4e-17 K addiction module antidote protein HigA
EMFIIPJN_00839 5.7e-220 G Transmembrane secretion effector
EMFIIPJN_00840 3.2e-119 K Bacterial regulatory proteins, tetR family
EMFIIPJN_00841 7.3e-59 yccF S Inner membrane component domain
EMFIIPJN_00842 5.9e-12
EMFIIPJN_00843 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
EMFIIPJN_00844 1.2e-13 EGP Transmembrane secretion effector
EMFIIPJN_00845 8.3e-285 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
EMFIIPJN_00846 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
EMFIIPJN_00847 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
EMFIIPJN_00848 1.3e-174 2.7.1.2 GK ROK family
EMFIIPJN_00849 9.1e-220 GK ROK family
EMFIIPJN_00850 2.2e-159 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
EMFIIPJN_00851 7.5e-253 gtr U Sugar (and other) transporter
EMFIIPJN_00852 0.0 P Domain of unknown function (DUF4976)
EMFIIPJN_00853 2e-271 aslB C Iron-sulfur cluster-binding domain
EMFIIPJN_00854 3.2e-107 S Sulfite exporter TauE/SafE
EMFIIPJN_00855 2.9e-57 L Helix-turn-helix domain
EMFIIPJN_00856 8.9e-94 S Sulfite exporter TauE/SafE
EMFIIPJN_00857 1.7e-63 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
EMFIIPJN_00859 3.6e-244 EGP Major facilitator Superfamily
EMFIIPJN_00860 1.6e-108 3.1.3.27 E haloacid dehalogenase-like hydrolase
EMFIIPJN_00861 8e-162 3.1.3.73 G Phosphoglycerate mutase family
EMFIIPJN_00862 1.6e-233 rutG F Permease family
EMFIIPJN_00863 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
EMFIIPJN_00864 3.9e-256 nplT G Alpha amylase, catalytic domain
EMFIIPJN_00865 2.2e-188 pit P Phosphate transporter family
EMFIIPJN_00866 6.7e-113 MA20_27875 P Protein of unknown function DUF47
EMFIIPJN_00867 4.1e-113 K helix_turn_helix, Lux Regulon
EMFIIPJN_00868 2.5e-242 T Histidine kinase
EMFIIPJN_00869 3e-120 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
EMFIIPJN_00870 4.2e-186 V ATPases associated with a variety of cellular activities
EMFIIPJN_00871 4.9e-224 V ABC-2 family transporter protein
EMFIIPJN_00872 4.6e-250 V ABC-2 family transporter protein
EMFIIPJN_00873 1.6e-71 E GDSL-like Lipase/Acylhydrolase family
EMFIIPJN_00874 4.7e-24 E GDSL-like Lipase/Acylhydrolase family
EMFIIPJN_00875 4.9e-103
EMFIIPJN_00876 1.9e-196
EMFIIPJN_00877 9.1e-110 3.4.13.21 E Peptidase family S51
EMFIIPJN_00878 2.3e-105 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
EMFIIPJN_00879 3.1e-162 M pfam nlp p60
EMFIIPJN_00880 2e-154 I Serine aminopeptidase, S33
EMFIIPJN_00881 1.7e-18 yozG K Cro/C1-type HTH DNA-binding domain
EMFIIPJN_00882 1.2e-54 S Protein of unknown function (DUF2975)
EMFIIPJN_00883 1.1e-240 pbuX F Permease family
EMFIIPJN_00884 9.7e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
EMFIIPJN_00885 0.0 pcrA 3.6.4.12 L DNA helicase
EMFIIPJN_00886 1.3e-61 S Domain of unknown function (DUF4418)
EMFIIPJN_00887 1.5e-217 V FtsX-like permease family
EMFIIPJN_00888 2.4e-151 lolD V ABC transporter
EMFIIPJN_00889 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
EMFIIPJN_00890 2e-151 S Peptidase C26
EMFIIPJN_00891 4e-72 3.5.4.5 F cytidine deaminase activity
EMFIIPJN_00892 1.8e-46 sdpI S SdpI/YhfL protein family
EMFIIPJN_00893 1.9e-109 E Transglutaminase-like superfamily
EMFIIPJN_00894 1.9e-64 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
EMFIIPJN_00895 8.8e-47 relB L RelB antitoxin
EMFIIPJN_00896 1.9e-129 pgm3 G Phosphoglycerate mutase family
EMFIIPJN_00897 1.8e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
EMFIIPJN_00898 1.6e-35
EMFIIPJN_00899 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
EMFIIPJN_00900 2.3e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
EMFIIPJN_00901 3.9e-194 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
EMFIIPJN_00902 4.1e-70 3.4.23.43 S Type IV leader peptidase family
EMFIIPJN_00903 7.3e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
EMFIIPJN_00904 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
EMFIIPJN_00905 1.3e-78 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
EMFIIPJN_00906 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
EMFIIPJN_00907 0.0 S L,D-transpeptidase catalytic domain
EMFIIPJN_00908 1.5e-291 sufB O FeS assembly protein SufB
EMFIIPJN_00909 3.3e-236 sufD O FeS assembly protein SufD
EMFIIPJN_00910 7e-144 sufC O FeS assembly ATPase SufC
EMFIIPJN_00911 1.2e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EMFIIPJN_00912 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
EMFIIPJN_00913 3.2e-109 yitW S Iron-sulfur cluster assembly protein
EMFIIPJN_00914 6.2e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
EMFIIPJN_00915 3.3e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
EMFIIPJN_00917 3e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
EMFIIPJN_00918 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
EMFIIPJN_00919 2.5e-217 phoH T PhoH-like protein
EMFIIPJN_00920 4.7e-102 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
EMFIIPJN_00921 8.7e-249 corC S CBS domain
EMFIIPJN_00922 8.1e-185 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
EMFIIPJN_00923 0.0 fadD 6.2.1.3 I AMP-binding enzyme
EMFIIPJN_00924 4.9e-197 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
EMFIIPJN_00925 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
EMFIIPJN_00926 3e-233 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
EMFIIPJN_00927 1.4e-234 yhjX EGP Major facilitator Superfamily
EMFIIPJN_00928 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
EMFIIPJN_00929 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
EMFIIPJN_00930 8.8e-143 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
EMFIIPJN_00931 8.8e-139 S UPF0126 domain
EMFIIPJN_00932 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
EMFIIPJN_00933 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
EMFIIPJN_00934 1.3e-254 hemN H Involved in the biosynthesis of porphyrin-containing compound
EMFIIPJN_00936 1.2e-191 K helix_turn _helix lactose operon repressor
EMFIIPJN_00937 3e-24 K purine nucleotide biosynthetic process
EMFIIPJN_00938 1.6e-38 K helix_turn _helix lactose operon repressor
EMFIIPJN_00939 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
EMFIIPJN_00940 3.1e-305 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
EMFIIPJN_00942 2e-43
EMFIIPJN_00943 1.3e-60 K helix_turn_helix, Lux Regulon
EMFIIPJN_00944 3.4e-59 2.7.13.3 T Histidine kinase
EMFIIPJN_00945 0.0 E ABC transporter, substrate-binding protein, family 5
EMFIIPJN_00946 0.0 S Glycosyl hydrolases related to GH101 family, GH129
EMFIIPJN_00947 8.6e-81
EMFIIPJN_00948 1.9e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
EMFIIPJN_00949 3.2e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
EMFIIPJN_00950 2.1e-157 S Sucrose-6F-phosphate phosphohydrolase
EMFIIPJN_00951 1.2e-92 bcp 1.11.1.15 O Redoxin
EMFIIPJN_00952 5.9e-125
EMFIIPJN_00953 2.8e-295 L PFAM Integrase catalytic
EMFIIPJN_00954 3.6e-148 L IstB-like ATP binding protein
EMFIIPJN_00955 2.6e-11
EMFIIPJN_00957 1.5e-120 2.5.1.19 S Belongs to the short-chain dehydrogenases reductases (SDR) family
EMFIIPJN_00958 4.8e-226 K SIR2-like domain
EMFIIPJN_00960 3.3e-105 S Putative inner membrane protein (DUF1819)
EMFIIPJN_00961 4.6e-126 S Domain of unknown function (DUF1788)
EMFIIPJN_00962 0.0 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
EMFIIPJN_00963 0.0 LV DNA restriction-modification system
EMFIIPJN_00964 3.3e-237 S SIR2-like domain
EMFIIPJN_00965 8e-251 S Domain of unknown function DUF87
EMFIIPJN_00966 0.0 LV DNA restriction-modification system
EMFIIPJN_00967 0.0 K SIR2-like domain
EMFIIPJN_00968 4.6e-256 lexA 3.6.4.12 K Putative DNA-binding domain
EMFIIPJN_00969 0.0 thiN 2.7.6.2 H PglZ domain
EMFIIPJN_00970 0.0 3.4.21.53 O Putative ATP-dependent Lon protease
EMFIIPJN_00971 4.3e-24
EMFIIPJN_00972 5.9e-26 pinR L resolvase
EMFIIPJN_00975 1.3e-25 L Phage integrase family
EMFIIPJN_00976 4.7e-35 rarD S EamA-like transporter family
EMFIIPJN_00977 1e-124 S Plasmid pRiA4b ORF-3-like protein
EMFIIPJN_00978 1.6e-96 CP_1020 S zinc ion binding
EMFIIPJN_00979 1.6e-29 CP_1020 S zinc ion binding
EMFIIPJN_00980 1.3e-19 CP_1020 S zinc ion binding
EMFIIPJN_00981 1.4e-178 I alpha/beta hydrolase fold
EMFIIPJN_00982 4.2e-89 S Appr-1'-p processing enzyme
EMFIIPJN_00983 7.2e-146 S phosphoesterase or phosphohydrolase
EMFIIPJN_00984 2e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
EMFIIPJN_00986 1.7e-26 S Phospholipase/Carboxylesterase
EMFIIPJN_00987 5.1e-133 S Phospholipase/Carboxylesterase
EMFIIPJN_00988 2.9e-201 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
EMFIIPJN_00989 2.4e-98 sixA 3.6.1.55 T Phosphoglycerate mutase family
EMFIIPJN_00991 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
EMFIIPJN_00992 5.7e-163 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
EMFIIPJN_00993 1.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
EMFIIPJN_00994 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
EMFIIPJN_00995 8.3e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
EMFIIPJN_00996 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
EMFIIPJN_00997 3.3e-291 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
EMFIIPJN_00998 2.9e-176 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
EMFIIPJN_00999 2e-157 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
EMFIIPJN_01000 2.4e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
EMFIIPJN_01001 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
EMFIIPJN_01002 5.8e-28
EMFIIPJN_01003 3.1e-217 MA20_36090 S Psort location Cytoplasmic, score 8.87
EMFIIPJN_01004 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
EMFIIPJN_01005 4.7e-122 3.8.1.2 S Haloacid dehalogenase-like hydrolase
EMFIIPJN_01006 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EMFIIPJN_01007 3.7e-301 ybiT S ABC transporter
EMFIIPJN_01008 1.4e-130 S Enoyl-(Acyl carrier protein) reductase
EMFIIPJN_01009 2e-55 P ABC transporter
EMFIIPJN_01010 8.3e-59 P ABC transporter
EMFIIPJN_01011 3.6e-50 XK26_04485 P Cobalt transport protein
EMFIIPJN_01012 3.8e-32 XK26_04485 P Cobalt transport protein
EMFIIPJN_01013 5e-234 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
EMFIIPJN_01014 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
EMFIIPJN_01015 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
EMFIIPJN_01016 5.6e-191 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
EMFIIPJN_01017 8.3e-179 rapZ S Displays ATPase and GTPase activities
EMFIIPJN_01018 3.5e-169 whiA K May be required for sporulation
EMFIIPJN_01019 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
EMFIIPJN_01020 3.5e-146 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
EMFIIPJN_01021 2.5e-34 secG U Preprotein translocase SecG subunit
EMFIIPJN_01022 4.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
EMFIIPJN_01023 2e-160 S Sucrose-6F-phosphate phosphohydrolase
EMFIIPJN_01024 3.6e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
EMFIIPJN_01025 5.8e-190
EMFIIPJN_01026 1.4e-240 brnQ U Component of the transport system for branched-chain amino acids
EMFIIPJN_01027 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
EMFIIPJN_01028 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
EMFIIPJN_01029 1.1e-190 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
EMFIIPJN_01030 6.8e-212 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
EMFIIPJN_01031 2.1e-156 G Fructosamine kinase
EMFIIPJN_01032 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
EMFIIPJN_01033 4e-134 S PAC2 family
EMFIIPJN_01039 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
EMFIIPJN_01040 2.2e-110 hit 2.7.7.53 FG HIT domain
EMFIIPJN_01041 2e-111 yebC K transcriptional regulatory protein
EMFIIPJN_01042 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
EMFIIPJN_01043 3e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
EMFIIPJN_01044 5.2e-198 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
EMFIIPJN_01045 9.8e-50 yajC U Preprotein translocase subunit
EMFIIPJN_01046 5.1e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
EMFIIPJN_01047 1.2e-222 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
EMFIIPJN_01048 2.1e-163 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
EMFIIPJN_01049 1.2e-228
EMFIIPJN_01050 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
EMFIIPJN_01051 4.8e-32
EMFIIPJN_01052 2.9e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
EMFIIPJN_01053 1.2e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
EMFIIPJN_01054 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
EMFIIPJN_01056 7.8e-165 supH S Sucrose-6F-phosphate phosphohydrolase
EMFIIPJN_01057 1.7e-292 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
EMFIIPJN_01058 0.0 pafB K WYL domain
EMFIIPJN_01059 6.8e-53
EMFIIPJN_01060 0.0 helY L DEAD DEAH box helicase
EMFIIPJN_01061 2.6e-250 L PFAM Integrase catalytic
EMFIIPJN_01062 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
EMFIIPJN_01063 2.8e-139 pgp 3.1.3.18 S HAD-hyrolase-like
EMFIIPJN_01064 5.2e-36
EMFIIPJN_01065 2.9e-64
EMFIIPJN_01066 2.6e-112 K helix_turn_helix, mercury resistance
EMFIIPJN_01067 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
EMFIIPJN_01068 8.5e-140 S Bacterial protein of unknown function (DUF881)
EMFIIPJN_01069 3.9e-35 sbp S Protein of unknown function (DUF1290)
EMFIIPJN_01070 4.6e-169 S Bacterial protein of unknown function (DUF881)
EMFIIPJN_01071 1.2e-106 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EMFIIPJN_01072 7.9e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
EMFIIPJN_01073 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
EMFIIPJN_01074 5.5e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
EMFIIPJN_01075 1.5e-185 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
EMFIIPJN_01076 7e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
EMFIIPJN_01077 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
EMFIIPJN_01078 1.6e-131 S SOS response associated peptidase (SRAP)
EMFIIPJN_01079 7.2e-158 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
EMFIIPJN_01080 8.2e-260 mmuP E amino acid
EMFIIPJN_01081 4.2e-56 EGP Major facilitator Superfamily
EMFIIPJN_01082 6.5e-190 V VanZ like family
EMFIIPJN_01083 1.6e-66 cefD 5.1.1.17 E Aminotransferase, class V
EMFIIPJN_01084 3.3e-100 S Acetyltransferase (GNAT) domain
EMFIIPJN_01085 1.5e-50
EMFIIPJN_01086 5.2e-121
EMFIIPJN_01089 2e-35 2.7.13.3 T Histidine kinase
EMFIIPJN_01090 1.1e-193 2.7.13.3 T Histidine kinase
EMFIIPJN_01091 5.3e-127 K helix_turn_helix, Lux Regulon
EMFIIPJN_01092 3e-95
EMFIIPJN_01093 6.1e-144 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EMFIIPJN_01094 1.4e-124 lolD Q ATPases associated with a variety of cellular activities
EMFIIPJN_01095 6.1e-176 V MacB-like periplasmic core domain
EMFIIPJN_01096 3.5e-39 relB L RelB antitoxin
EMFIIPJN_01097 1.8e-27 G Transporter major facilitator family protein
EMFIIPJN_01098 3.5e-267 mmuP E amino acid
EMFIIPJN_01100 1e-62 yeaO K Protein of unknown function, DUF488
EMFIIPJN_01101 5.3e-77
EMFIIPJN_01102 9.4e-173 3.6.4.12
EMFIIPJN_01103 4e-65 yijF S Domain of unknown function (DUF1287)
EMFIIPJN_01104 4.9e-298 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EMFIIPJN_01105 5.3e-71 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
EMFIIPJN_01106 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
EMFIIPJN_01107 3.6e-76 3.5.1.124 S DJ-1/PfpI family
EMFIIPJN_01108 6.7e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
EMFIIPJN_01109 3.7e-174 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
EMFIIPJN_01110 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
EMFIIPJN_01111 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
EMFIIPJN_01112 1.4e-145 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
EMFIIPJN_01113 5.8e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
EMFIIPJN_01114 2.2e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
EMFIIPJN_01115 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
EMFIIPJN_01116 3.3e-91
EMFIIPJN_01117 1.5e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
EMFIIPJN_01118 4.6e-243 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
EMFIIPJN_01119 1.6e-257 G ABC transporter substrate-binding protein
EMFIIPJN_01120 2.4e-36 M Peptidase family M23
EMFIIPJN_01122 7.8e-174 xerH L Phage integrase family
EMFIIPJN_01124 2.3e-133 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
EMFIIPJN_01125 6e-87 K Psort location Cytoplasmic, score
EMFIIPJN_01126 2.3e-29 S Fic/DOC family
EMFIIPJN_01129 4.5e-56 ard S Antirestriction protein (ArdA)
EMFIIPJN_01130 3e-08
EMFIIPJN_01131 5.9e-85 M G5 domain protein
EMFIIPJN_01132 7.7e-68
EMFIIPJN_01135 1.7e-243 topB 5.99.1.2 L DNA topoisomerase
EMFIIPJN_01138 2.8e-16 K Bacterial mobilisation protein (MobC)
EMFIIPJN_01139 2.9e-36 S Pfam:CtkA_N
EMFIIPJN_01141 9.5e-62 ecoRIIR 3.1.21.4 L EcoRII C terminal
EMFIIPJN_01142 7e-144 S Fic/DOC family
EMFIIPJN_01143 1.5e-138 L PFAM Relaxase mobilization nuclease family protein
EMFIIPJN_01144 2.9e-86 2.7.11.1 S HipA-like C-terminal domain
EMFIIPJN_01146 6.2e-40
EMFIIPJN_01147 9.4e-50 S Domain of unknown function (DUF4913)
EMFIIPJN_01148 5.1e-230 U TraM recognition site of TraD and TraG
EMFIIPJN_01149 1.5e-22
EMFIIPJN_01152 8.9e-202 traD S COG0433 Predicted ATPase
EMFIIPJN_01153 2.4e-185
EMFIIPJN_01154 7.6e-142
EMFIIPJN_01155 1.7e-29
EMFIIPJN_01156 3.4e-32
EMFIIPJN_01157 1.9e-07
EMFIIPJN_01158 8e-21
EMFIIPJN_01159 0.0 XK27_00515 D Cell surface antigen C-terminus
EMFIIPJN_01160 6.6e-38
EMFIIPJN_01161 1.1e-256 U Spy0128-like isopeptide containing domain
EMFIIPJN_01162 4e-38
EMFIIPJN_01163 1.6e-51
EMFIIPJN_01164 4.5e-22
EMFIIPJN_01166 1e-30 parA D VirC1 protein
EMFIIPJN_01167 1.7e-15 S Transcription factor WhiB
EMFIIPJN_01168 8.3e-18 S Helix-turn-helix domain
EMFIIPJN_01173 3.8e-10
EMFIIPJN_01175 6.2e-196 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
EMFIIPJN_01176 4.2e-104 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
EMFIIPJN_01177 2.3e-159 yeaZ 2.3.1.234 O Glycoprotease family
EMFIIPJN_01178 4e-88 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
EMFIIPJN_01179 1.5e-172 holA 2.7.7.7 L DNA polymerase III delta subunit
EMFIIPJN_01180 1.4e-309 comE S Competence protein
EMFIIPJN_01181 1.6e-44 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
EMFIIPJN_01182 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
EMFIIPJN_01183 1.6e-160 ET Bacterial periplasmic substrate-binding proteins
EMFIIPJN_01184 5.3e-170 corA P CorA-like Mg2+ transporter protein
EMFIIPJN_01185 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
EMFIIPJN_01186 7.2e-231 L ribosomal rna small subunit methyltransferase
EMFIIPJN_01187 1.6e-70 pdxH S Pfam:Pyridox_oxidase
EMFIIPJN_01188 1.5e-169 EG EamA-like transporter family
EMFIIPJN_01189 2.1e-131 C Putative TM nitroreductase
EMFIIPJN_01190 3.8e-32
EMFIIPJN_01191 8.7e-256 S Metal-independent alpha-mannosidase (GH125)
EMFIIPJN_01192 6.6e-237 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
EMFIIPJN_01193 1.4e-137 K helix_turn _helix lactose operon repressor
EMFIIPJN_01194 1.4e-221 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
EMFIIPJN_01195 4.5e-125 lacG G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01196 1.3e-123 G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01197 1.1e-175 srrA1 G Bacterial extracellular solute-binding protein
EMFIIPJN_01198 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
EMFIIPJN_01199 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
EMFIIPJN_01200 1e-15 L Phage integrase family
EMFIIPJN_01201 7e-39
EMFIIPJN_01202 1e-171 S Fic/DOC family
EMFIIPJN_01203 4.4e-255 S HipA-like C-terminal domain
EMFIIPJN_01205 2e-73
EMFIIPJN_01206 1.6e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
EMFIIPJN_01207 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EMFIIPJN_01208 1.7e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
EMFIIPJN_01209 1.4e-47 S Domain of unknown function (DUF4193)
EMFIIPJN_01210 2.9e-140 S Protein of unknown function (DUF3071)
EMFIIPJN_01211 4.5e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
EMFIIPJN_01212 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
EMFIIPJN_01214 5.2e-43 K Psort location Cytoplasmic, score
EMFIIPJN_01215 1.2e-48 K Psort location Cytoplasmic, score
EMFIIPJN_01216 0.0 lhr L DEAD DEAH box helicase
EMFIIPJN_01217 1.7e-171 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EMFIIPJN_01218 4.5e-222 G Major Facilitator Superfamily
EMFIIPJN_01219 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
EMFIIPJN_01220 8.2e-191 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
EMFIIPJN_01221 3.3e-115
EMFIIPJN_01222 2.9e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
EMFIIPJN_01223 0.0 pknL 2.7.11.1 KLT PASTA
EMFIIPJN_01224 4.1e-127 plsC2 2.3.1.51 I Phosphate acyltransferases
EMFIIPJN_01225 3.4e-113
EMFIIPJN_01226 1.6e-188 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
EMFIIPJN_01227 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
EMFIIPJN_01228 2.4e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
EMFIIPJN_01229 1.8e-102 recX S Modulates RecA activity
EMFIIPJN_01230 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
EMFIIPJN_01231 7e-39 S Protein of unknown function (DUF3046)
EMFIIPJN_01232 1.2e-78 K Helix-turn-helix XRE-family like proteins
EMFIIPJN_01233 4.6e-97 cinA 3.5.1.42 S Belongs to the CinA family
EMFIIPJN_01234 2.1e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EMFIIPJN_01235 0.0 ftsK D FtsK SpoIIIE family protein
EMFIIPJN_01236 1.7e-149 fic D Fic/DOC family
EMFIIPJN_01237 1.1e-181 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
EMFIIPJN_01238 2e-277 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EMFIIPJN_01239 5.2e-150 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
EMFIIPJN_01240 7.9e-166 ydeD EG EamA-like transporter family
EMFIIPJN_01241 3.3e-136 ybhL S Belongs to the BI1 family
EMFIIPJN_01242 7.4e-109 K helix_turn_helix, Lux Regulon
EMFIIPJN_01243 2e-120 E Psort location Cytoplasmic, score 8.87
EMFIIPJN_01244 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
EMFIIPJN_01245 0.0 ctpE P E1-E2 ATPase
EMFIIPJN_01246 2.8e-97
EMFIIPJN_01247 2e-241 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
EMFIIPJN_01248 3.8e-134 S Protein of unknown function (DUF3159)
EMFIIPJN_01249 1.4e-153 S Protein of unknown function (DUF3710)
EMFIIPJN_01250 4.8e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
EMFIIPJN_01251 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
EMFIIPJN_01252 1.1e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
EMFIIPJN_01253 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01254 0.0 E ABC transporter, substrate-binding protein, family 5
EMFIIPJN_01255 3.6e-188 xerC D Belongs to the 'phage' integrase family. XerC subfamily
EMFIIPJN_01256 3.2e-147 V ABC transporter, ATP-binding protein
EMFIIPJN_01257 0.0 MV MacB-like periplasmic core domain
EMFIIPJN_01258 4.5e-42
EMFIIPJN_01259 7.2e-189 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
EMFIIPJN_01260 5.8e-188 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
EMFIIPJN_01261 1.1e-78
EMFIIPJN_01262 0.0 typA T Elongation factor G C-terminus
EMFIIPJN_01263 7e-107 K Virulence activator alpha C-term
EMFIIPJN_01264 4.8e-137 V ATPases associated with a variety of cellular activities
EMFIIPJN_01265 0.0 V FtsX-like permease family
EMFIIPJN_01266 2.5e-242 naiP U Sugar (and other) transporter
EMFIIPJN_01267 2.1e-238 iscS1 2.8.1.7 E Aminotransferase class-V
EMFIIPJN_01268 3.8e-162 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
EMFIIPJN_01269 1.3e-301 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
EMFIIPJN_01270 9.2e-250 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
EMFIIPJN_01271 1.5e-155 nrtR 3.6.1.55 F NUDIX hydrolase
EMFIIPJN_01272 1.1e-113 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
EMFIIPJN_01273 1.2e-149 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
EMFIIPJN_01274 3.8e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
EMFIIPJN_01275 4.1e-159 xerD D recombinase XerD
EMFIIPJN_01276 5.8e-195 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
EMFIIPJN_01277 5e-163 EG GntP family permease
EMFIIPJN_01278 9.3e-92 cdaR KT Putative sugar diacid recognition
EMFIIPJN_01279 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
EMFIIPJN_01280 6.2e-25 rpmI J Ribosomal protein L35
EMFIIPJN_01281 1.1e-112 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EMFIIPJN_01282 1.6e-25 S Spermine/spermidine synthase domain
EMFIIPJN_01283 2.7e-41 S Spermine/spermidine synthase domain
EMFIIPJN_01284 4.2e-135 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
EMFIIPJN_01285 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
EMFIIPJN_01286 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EMFIIPJN_01287 3.7e-182 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
EMFIIPJN_01288 9.4e-191 galM 5.1.3.3 G Aldose 1-epimerase
EMFIIPJN_01289 9.9e-185 galM 5.1.3.3 G Aldose 1-epimerase
EMFIIPJN_01290 5.6e-52
EMFIIPJN_01291 3.6e-137 sigH K Belongs to the sigma-70 factor family. ECF subfamily
EMFIIPJN_01292 1.9e-297 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EMFIIPJN_01293 6.9e-192 V Acetyltransferase (GNAT) domain
EMFIIPJN_01294 1.1e-19 V Acetyltransferase (GNAT) domain
EMFIIPJN_01295 2.1e-46 V Acetyltransferase (GNAT) domain
EMFIIPJN_01296 0.0 smc D Required for chromosome condensation and partitioning
EMFIIPJN_01297 3.9e-298 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
EMFIIPJN_01298 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
EMFIIPJN_01299 6.6e-98 3.6.1.55 F NUDIX domain
EMFIIPJN_01300 6.5e-248 nagA 3.5.1.25 G Amidohydrolase family
EMFIIPJN_01301 6.2e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
EMFIIPJN_01302 3.6e-210 GK ROK family
EMFIIPJN_01303 2.2e-165 2.7.1.2 GK ROK family
EMFIIPJN_01304 1.3e-224 GK ROK family
EMFIIPJN_01305 4.7e-168 2.7.1.4 G pfkB family carbohydrate kinase
EMFIIPJN_01306 6.4e-43 G Major Facilitator Superfamily
EMFIIPJN_01307 3.1e-75 G Major Facilitator Superfamily
EMFIIPJN_01308 7.9e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
EMFIIPJN_01309 7.7e-14
EMFIIPJN_01310 2.4e-171 ftsQ 6.3.2.4 D Cell division protein FtsQ
EMFIIPJN_01311 2.5e-286 murC 6.3.2.8 M Belongs to the MurCDEF family
EMFIIPJN_01312 1.2e-219 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
EMFIIPJN_01313 9.7e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
EMFIIPJN_01314 6.6e-273 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
EMFIIPJN_01315 4.5e-205 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EMFIIPJN_01316 3.3e-240 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
EMFIIPJN_01317 2e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EMFIIPJN_01318 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
EMFIIPJN_01319 4.5e-66 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
EMFIIPJN_01320 1.9e-189 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
EMFIIPJN_01321 1.3e-93 mraZ K Belongs to the MraZ family
EMFIIPJN_01322 0.0 L DNA helicase
EMFIIPJN_01323 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
EMFIIPJN_01324 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
EMFIIPJN_01325 3e-47 M Lysin motif
EMFIIPJN_01326 5.8e-129 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
EMFIIPJN_01327 7.7e-161 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
EMFIIPJN_01328 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
EMFIIPJN_01329 1.2e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EMFIIPJN_01330 6.4e-122 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
EMFIIPJN_01331 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
EMFIIPJN_01332 4.3e-217 EGP Major facilitator Superfamily
EMFIIPJN_01333 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
EMFIIPJN_01334 8.1e-279 S Uncharacterized protein conserved in bacteria (DUF2252)
EMFIIPJN_01335 1.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
EMFIIPJN_01336 9.1e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
EMFIIPJN_01337 5e-99
EMFIIPJN_01338 4.6e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
EMFIIPJN_01339 1.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EMFIIPJN_01340 1.9e-253 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
EMFIIPJN_01341 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
EMFIIPJN_01342 7.7e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
EMFIIPJN_01343 0.0 2.4.1.230, 3.2.1.51 GH65,GH95 G Glycosyl hydrolase family 65, N-terminal domain
EMFIIPJN_01344 5.4e-164 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
EMFIIPJN_01345 2.5e-141 IQ KR domain
EMFIIPJN_01346 9e-167 4.2.1.68 M Enolase C-terminal domain-like
EMFIIPJN_01347 9.2e-10
EMFIIPJN_01348 0.0 4.2.1.53 S MCRA family
EMFIIPJN_01349 2.3e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
EMFIIPJN_01350 1.5e-33 yneG S Domain of unknown function (DUF4186)
EMFIIPJN_01351 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
EMFIIPJN_01352 1.7e-201 K WYL domain
EMFIIPJN_01353 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
EMFIIPJN_01354 5.4e-90 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
EMFIIPJN_01355 5.3e-22 tccB2 V DivIVA protein
EMFIIPJN_01356 4.9e-45 yggT S YGGT family
EMFIIPJN_01357 5.9e-69 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
EMFIIPJN_01358 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
EMFIIPJN_01359 5.7e-249 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EMFIIPJN_01360 7.4e-296 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
EMFIIPJN_01361 3.7e-155 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
EMFIIPJN_01362 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
EMFIIPJN_01363 1.7e-229 O AAA domain (Cdc48 subfamily)
EMFIIPJN_01364 4.6e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
EMFIIPJN_01365 5.6e-62 S Thiamine-binding protein
EMFIIPJN_01366 7.1e-248 ydjK G Sugar (and other) transporter
EMFIIPJN_01367 9.5e-216 2.7.13.3 T Histidine kinase
EMFIIPJN_01368 6.1e-123 K helix_turn_helix, Lux Regulon
EMFIIPJN_01369 1.1e-189
EMFIIPJN_01370 1e-257 O SERine Proteinase INhibitors
EMFIIPJN_01371 1.8e-195 K helix_turn _helix lactose operon repressor
EMFIIPJN_01372 6.2e-241 lacY P LacY proton/sugar symporter
EMFIIPJN_01373 3e-303 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
EMFIIPJN_01374 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
EMFIIPJN_01375 2.5e-149 C Putative TM nitroreductase
EMFIIPJN_01376 6.4e-198 S Glycosyltransferase, group 2 family protein
EMFIIPJN_01377 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
EMFIIPJN_01378 0.0 ecfA GP ABC transporter, ATP-binding protein
EMFIIPJN_01379 7e-47 yhbY J CRS1_YhbY
EMFIIPJN_01380 1.6e-53 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
EMFIIPJN_01381 5.7e-54
EMFIIPJN_01382 5.9e-188 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
EMFIIPJN_01383 1.7e-252 EGP Major facilitator Superfamily
EMFIIPJN_01384 5.1e-33 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
EMFIIPJN_01386 3.4e-250 rarA L Recombination factor protein RarA
EMFIIPJN_01387 0.0 helY L DEAD DEAH box helicase
EMFIIPJN_01388 4e-198 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
EMFIIPJN_01390 1.4e-286 ydfD EK Alanine-glyoxylate amino-transferase
EMFIIPJN_01391 6.6e-111 argO S LysE type translocator
EMFIIPJN_01392 1e-287 phoN I PAP2 superfamily
EMFIIPJN_01393 1.2e-194 gluD E Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01394 1.2e-110 gluC E Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01395 5.3e-147 gluB ET Belongs to the bacterial solute-binding protein 3 family
EMFIIPJN_01396 5.2e-153 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
EMFIIPJN_01397 1.3e-99 S Aminoacyl-tRNA editing domain
EMFIIPJN_01398 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
EMFIIPJN_01399 5.9e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
EMFIIPJN_01400 2e-224 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
EMFIIPJN_01401 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
EMFIIPJN_01402 9.6e-59 lipA I Hydrolase, alpha beta domain protein
EMFIIPJN_01403 3e-132 xylE U Sugar (and other) transporter
EMFIIPJN_01404 3e-26 K helix_turn_helix, arabinose operon control protein
EMFIIPJN_01405 0.0 clpC O ATPase family associated with various cellular activities (AAA)
EMFIIPJN_01406 2.4e-178 uspA T Belongs to the universal stress protein A family
EMFIIPJN_01407 7.7e-178 S Protein of unknown function (DUF3027)
EMFIIPJN_01408 1.7e-66 cspB K 'Cold-shock' DNA-binding domain
EMFIIPJN_01409 2.6e-309 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
EMFIIPJN_01410 2e-132 KT Response regulator receiver domain protein
EMFIIPJN_01411 1.3e-100
EMFIIPJN_01412 4.2e-33 S Proteins of 100 residues with WXG
EMFIIPJN_01413 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
EMFIIPJN_01414 6.1e-38 K 'Cold-shock' DNA-binding domain
EMFIIPJN_01415 2.4e-84 S LytR cell envelope-related transcriptional attenuator
EMFIIPJN_01416 3.8e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
EMFIIPJN_01417 1.7e-188 moxR S ATPase family associated with various cellular activities (AAA)
EMFIIPJN_01418 3.7e-163 S Protein of unknown function DUF58
EMFIIPJN_01419 1.3e-83
EMFIIPJN_01420 2.6e-189 S von Willebrand factor (vWF) type A domain
EMFIIPJN_01421 1.1e-152 S von Willebrand factor (vWF) type A domain
EMFIIPJN_01422 3.1e-56
EMFIIPJN_01423 3.1e-255 S PGAP1-like protein
EMFIIPJN_01424 1.4e-110 ykoE S ABC-type cobalt transport system, permease component
EMFIIPJN_01425 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
EMFIIPJN_01426 0.0 S Lysylphosphatidylglycerol synthase TM region
EMFIIPJN_01427 8.1e-42 hup L Belongs to the bacterial histone-like protein family
EMFIIPJN_01428 3.5e-285 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
EMFIIPJN_01430 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
EMFIIPJN_01431 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
EMFIIPJN_01432 8.4e-136 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
EMFIIPJN_01433 1.7e-162 G Phosphotransferase System
EMFIIPJN_01434 2.1e-46 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
EMFIIPJN_01435 1.1e-78 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
EMFIIPJN_01436 3.3e-71 H Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
EMFIIPJN_01437 1.4e-278 manR K PRD domain
EMFIIPJN_01438 1.9e-135 3.8.1.2 S Haloacid dehalogenase-like hydrolase
EMFIIPJN_01439 2.3e-287 arc O AAA ATPase forming ring-shaped complexes
EMFIIPJN_01440 2.2e-117 apl 3.1.3.1 S SNARE associated Golgi protein
EMFIIPJN_01441 2.1e-118 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
EMFIIPJN_01442 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
EMFIIPJN_01443 4.3e-132 3.8.1.2 S Haloacid dehalogenase-like hydrolase
EMFIIPJN_01444 9.3e-189 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
EMFIIPJN_01445 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
EMFIIPJN_01446 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
EMFIIPJN_01447 2.5e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
EMFIIPJN_01448 8.4e-167 G Fic/DOC family
EMFIIPJN_01449 3.6e-148 L IstB-like ATP binding protein
EMFIIPJN_01450 9.8e-296 L PFAM Integrase catalytic
EMFIIPJN_01453 7.9e-49 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
EMFIIPJN_01454 9.2e-184 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
EMFIIPJN_01455 1.2e-110 cas4 3.1.12.1 L Domain of unknown function DUF83
EMFIIPJN_01456 3.4e-145 cas7c L CRISPR-associated protein Cas7
EMFIIPJN_01457 2.5e-242 csd1 S CRISPR-associated protein (Cas_Csd1)
EMFIIPJN_01458 3e-103 cas5d S CRISPR-associated protein (Cas_Cas5)
EMFIIPJN_01459 0.0 L DEAD-like helicases superfamily
EMFIIPJN_01460 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
EMFIIPJN_01461 1.3e-152 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EMFIIPJN_01462 4.7e-162 dcuD C C4-dicarboxylate anaerobic carrier
EMFIIPJN_01463 2.6e-105 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
EMFIIPJN_01464 2.4e-43 K acetyltransferase
EMFIIPJN_01465 2.3e-126 rbsR K helix_turn _helix lactose operon repressor
EMFIIPJN_01466 0.0 V ABC transporter transmembrane region
EMFIIPJN_01467 0.0 V ABC transporter, ATP-binding protein
EMFIIPJN_01468 3.2e-87 K MarR family
EMFIIPJN_01469 1.9e-181 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
EMFIIPJN_01470 4.6e-243 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
EMFIIPJN_01471 1.3e-69 S Nucleotidyltransferase substrate binding protein like
EMFIIPJN_01472 3.3e-46 S Nucleotidyltransferase domain
EMFIIPJN_01474 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
EMFIIPJN_01475 6.6e-130 K Bacterial regulatory proteins, tetR family
EMFIIPJN_01476 5e-256 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
EMFIIPJN_01477 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
EMFIIPJN_01478 3.2e-135 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EMFIIPJN_01479 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
EMFIIPJN_01480 6.3e-257 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
EMFIIPJN_01481 3.7e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
EMFIIPJN_01482 4.1e-95 ywrO 1.6.5.2 S Flavodoxin-like fold
EMFIIPJN_01483 0.0 fadD 6.2.1.3 I AMP-binding enzyme
EMFIIPJN_01484 3.6e-64 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
EMFIIPJN_01485 3.7e-78 F Nucleoside 2-deoxyribosyltransferase
EMFIIPJN_01487 4.5e-200 S Endonuclease/Exonuclease/phosphatase family
EMFIIPJN_01488 3.4e-180 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
EMFIIPJN_01489 1.8e-234 aspB E Aminotransferase class-V
EMFIIPJN_01490 2.2e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
EMFIIPJN_01491 1.1e-85 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
EMFIIPJN_01492 4.1e-101 XK27_03610 K Acetyltransferase (GNAT) domain
EMFIIPJN_01493 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
EMFIIPJN_01494 4e-147 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
EMFIIPJN_01495 1.6e-249 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
EMFIIPJN_01496 6e-151 map 3.4.11.18 E Methionine aminopeptidase
EMFIIPJN_01497 6.7e-143 S Short repeat of unknown function (DUF308)
EMFIIPJN_01498 0.0 pepO 3.4.24.71 O Peptidase family M13
EMFIIPJN_01499 2.4e-116 L Single-strand binding protein family
EMFIIPJN_01500 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
EMFIIPJN_01501 2.2e-100 pflA 1.97.1.4 O Radical SAM superfamily
EMFIIPJN_01502 6.8e-262 recD2 3.6.4.12 L PIF1-like helicase
EMFIIPJN_01503 7e-121 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
EMFIIPJN_01504 1e-139 K Periplasmic binding protein-like domain
EMFIIPJN_01505 9.4e-256 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
EMFIIPJN_01506 6.8e-181 G Transporter major facilitator family protein
EMFIIPJN_01507 1.4e-214 2.1.1.72 LV Eco57I restriction-modification methylase
EMFIIPJN_01508 4e-202 L SNF2 family N-terminal domain
EMFIIPJN_01509 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
EMFIIPJN_01510 8.7e-213 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
EMFIIPJN_01511 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
EMFIIPJN_01512 2.5e-124 livF E ATPases associated with a variety of cellular activities
EMFIIPJN_01513 7e-161 E Branched-chain amino acid ATP-binding cassette transporter
EMFIIPJN_01514 1.4e-187 livM U Belongs to the binding-protein-dependent transport system permease family
EMFIIPJN_01515 5.4e-111 U Belongs to the binding-protein-dependent transport system permease family
EMFIIPJN_01516 1.8e-207 livK E Receptor family ligand binding region
EMFIIPJN_01517 5.3e-164 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
EMFIIPJN_01518 3.7e-191 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
EMFIIPJN_01519 1.3e-36 rpmE J Binds the 23S rRNA
EMFIIPJN_01521 3.7e-100 yebQ EGP Major facilitator Superfamily
EMFIIPJN_01522 2.4e-147
EMFIIPJN_01523 1.5e-68 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
EMFIIPJN_01524 6e-165 dkgB S Oxidoreductase, aldo keto reductase family protein
EMFIIPJN_01525 1.3e-19 lmrB U Major Facilitator Superfamily
EMFIIPJN_01526 2.7e-79 K Winged helix DNA-binding domain
EMFIIPJN_01528 5.3e-178 glkA 2.7.1.2 G ROK family
EMFIIPJN_01530 2.2e-307 EGP Major Facilitator Superfamily
EMFIIPJN_01531 0.0 yjjK S ATP-binding cassette protein, ChvD family
EMFIIPJN_01532 3.3e-169 tesB I Thioesterase-like superfamily
EMFIIPJN_01533 3.2e-92 S Protein of unknown function (DUF3180)
EMFIIPJN_01534 1.2e-299 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
EMFIIPJN_01535 3.1e-156 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
EMFIIPJN_01536 9.6e-118 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
EMFIIPJN_01537 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EMFIIPJN_01538 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
EMFIIPJN_01539 3.7e-210 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
EMFIIPJN_01540 3.6e-253 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
EMFIIPJN_01541 4.8e-299
EMFIIPJN_01542 4.8e-191 natA V ATPases associated with a variety of cellular activities
EMFIIPJN_01543 4.7e-235 epsG M Glycosyl transferase family 21
EMFIIPJN_01544 1.2e-280 S AI-2E family transporter
EMFIIPJN_01545 5.5e-180 3.4.14.13 M Glycosyltransferase like family 2
EMFIIPJN_01546 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
EMFIIPJN_01547 1.8e-261 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
EMFIIPJN_01550 2e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
EMFIIPJN_01553 3.1e-210 S Helix-turn-helix domain
EMFIIPJN_01554 2.4e-80 S Transcription factor WhiB
EMFIIPJN_01555 8.8e-74 parA D AAA domain
EMFIIPJN_01556 4.9e-38
EMFIIPJN_01557 6.3e-282 S ATPases associated with a variety of cellular activities
EMFIIPJN_01558 2.9e-93 K FR47-like protein
EMFIIPJN_01559 6.5e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
EMFIIPJN_01560 0.0 XK27_00515 D Cell surface antigen C-terminus
EMFIIPJN_01561 3e-20
EMFIIPJN_01563 1.4e-38
EMFIIPJN_01564 2.1e-146
EMFIIPJN_01565 2.5e-41 S PrgI family protein
EMFIIPJN_01566 0.0 trsE U type IV secretory pathway VirB4
EMFIIPJN_01567 4.5e-201 isp2 3.2.1.96 M CHAP domain
EMFIIPJN_01568 9.2e-149
EMFIIPJN_01569 1.5e-46
EMFIIPJN_01570 2.3e-147 L Psort location Cytoplasmic, score
EMFIIPJN_01571 0.0 U Type IV secretory system Conjugative DNA transfer
EMFIIPJN_01573 1.1e-53
EMFIIPJN_01574 5.5e-222 ard S Antirestriction protein (ArdA)
EMFIIPJN_01575 6.6e-39
EMFIIPJN_01576 5.6e-43
EMFIIPJN_01577 2.6e-147 S Protein of unknown function (DUF3801)
EMFIIPJN_01578 1.1e-262 rlx U Relaxase/Mobilisation nuclease domain
EMFIIPJN_01579 5.9e-70 S Bacterial mobilisation protein (MobC)
EMFIIPJN_01580 5.4e-62
EMFIIPJN_01581 4.7e-41
EMFIIPJN_01582 1.1e-236 K ParB-like nuclease domain
EMFIIPJN_01583 7.7e-106 S Domain of unknown function (DUF4192)
EMFIIPJN_01584 1.5e-78 S Nucleotidyltransferase domain
EMFIIPJN_01585 8e-182 L Phage integrase family
EMFIIPJN_01587 1.2e-15 L Phage integrase family
EMFIIPJN_01588 2.3e-13 sprF 4.6.1.1 M Cell surface antigen C-terminus
EMFIIPJN_01589 2.5e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
EMFIIPJN_01590 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
EMFIIPJN_01591 4.8e-185 lacR K Transcriptional regulator, LacI family
EMFIIPJN_01592 3.1e-21 L Helix-turn-helix domain
EMFIIPJN_01593 1.4e-197 G Bacterial extracellular solute-binding protein
EMFIIPJN_01594 4e-48 G Bacterial extracellular solute-binding protein
EMFIIPJN_01595 2.6e-219 GK ROK family
EMFIIPJN_01596 0.0 G Glycosyl hydrolase family 20, domain 2
EMFIIPJN_01597 4.1e-09 L HTH-like domain
EMFIIPJN_01598 1.5e-218 vex3 V ABC transporter permease
EMFIIPJN_01599 1.2e-211 vex1 V Efflux ABC transporter, permease protein
EMFIIPJN_01600 7.1e-110 vex2 V ABC transporter, ATP-binding protein
EMFIIPJN_01601 6.4e-12 azlC E AzlC protein
EMFIIPJN_01602 1.5e-97 ptpA 3.1.3.48 T low molecular weight
EMFIIPJN_01603 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
EMFIIPJN_01604 1.9e-166 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
EMFIIPJN_01605 3.4e-73 attW O OsmC-like protein
EMFIIPJN_01606 1.5e-189 T Universal stress protein family
EMFIIPJN_01607 3.1e-101 M NlpC/P60 family
EMFIIPJN_01608 2.9e-99 M NlpC/P60 family
EMFIIPJN_01609 1.7e-168 usp 3.5.1.28 CBM50 S CHAP domain
EMFIIPJN_01610 2.1e-213 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
EMFIIPJN_01611 1.8e-32
EMFIIPJN_01612 6e-174 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
EMFIIPJN_01613 1.6e-115 phoU P Plays a role in the regulation of phosphate uptake
EMFIIPJN_01614 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
EMFIIPJN_01615 1.1e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
EMFIIPJN_01616 2.3e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
EMFIIPJN_01619 4.1e-145 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
EMFIIPJN_01620 5.8e-214 araJ EGP Major facilitator Superfamily
EMFIIPJN_01621 0.0 S Domain of unknown function (DUF4037)
EMFIIPJN_01622 2.9e-116 S Protein of unknown function (DUF4125)
EMFIIPJN_01623 0.0 S alpha beta
EMFIIPJN_01624 4.4e-68
EMFIIPJN_01625 1.5e-287 pspC KT PspC domain
EMFIIPJN_01626 4e-237 tcsS3 KT PspC domain
EMFIIPJN_01627 4.4e-118 degU K helix_turn_helix, Lux Regulon
EMFIIPJN_01628 4.1e-168 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
EMFIIPJN_01629 8.3e-204 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
EMFIIPJN_01630 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
EMFIIPJN_01631 7.2e-167 G ABC transporter permease
EMFIIPJN_01632 1.2e-172 G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01633 6.1e-249 G Bacterial extracellular solute-binding protein
EMFIIPJN_01635 5.7e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
EMFIIPJN_01636 8.3e-181 I Diacylglycerol kinase catalytic domain
EMFIIPJN_01637 1.3e-162 arbG K CAT RNA binding domain
EMFIIPJN_01638 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
EMFIIPJN_01640 2.3e-67 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
EMFIIPJN_01641 2.8e-295 L PFAM Integrase catalytic
EMFIIPJN_01642 3.6e-148 L IstB-like ATP binding protein
EMFIIPJN_01643 1.2e-80 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
EMFIIPJN_01644 2.9e-30 crr 2.7.1.193 G pts system, glucose-specific IIABC component
EMFIIPJN_01645 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
EMFIIPJN_01646 4e-198 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
EMFIIPJN_01647 7.2e-74 K Transcriptional regulator
EMFIIPJN_01648 4.2e-278 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EMFIIPJN_01649 1e-172 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
EMFIIPJN_01650 2.7e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
EMFIIPJN_01652 1.6e-98
EMFIIPJN_01653 3.6e-261 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
EMFIIPJN_01654 4.3e-219 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
EMFIIPJN_01655 3.8e-218 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
EMFIIPJN_01656 4.8e-82 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
EMFIIPJN_01657 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
EMFIIPJN_01658 3.4e-186 nusA K Participates in both transcription termination and antitermination
EMFIIPJN_01659 8.1e-126
EMFIIPJN_01660 2.6e-77 K helix_turn _helix lactose operon repressor
EMFIIPJN_01662 3.2e-152 E Transglutaminase/protease-like homologues
EMFIIPJN_01663 0.0 gcs2 S A circularly permuted ATPgrasp
EMFIIPJN_01664 2.1e-168 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
EMFIIPJN_01665 3.3e-60 rplQ J Ribosomal protein L17
EMFIIPJN_01666 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EMFIIPJN_01667 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
EMFIIPJN_01668 9.5e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
EMFIIPJN_01669 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
EMFIIPJN_01670 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
EMFIIPJN_01671 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
EMFIIPJN_01672 6.9e-248 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
EMFIIPJN_01673 8.1e-76 rplO J binds to the 23S rRNA
EMFIIPJN_01674 7e-26 rpmD J Ribosomal protein L30p/L7e
EMFIIPJN_01675 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
EMFIIPJN_01676 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
EMFIIPJN_01677 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
EMFIIPJN_01678 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
EMFIIPJN_01679 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EMFIIPJN_01680 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
EMFIIPJN_01681 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
EMFIIPJN_01682 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
EMFIIPJN_01683 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
EMFIIPJN_01684 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
EMFIIPJN_01685 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
EMFIIPJN_01686 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
EMFIIPJN_01687 9.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
EMFIIPJN_01688 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
EMFIIPJN_01689 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
EMFIIPJN_01690 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
EMFIIPJN_01691 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
EMFIIPJN_01692 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
EMFIIPJN_01693 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
EMFIIPJN_01694 8.2e-137 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
EMFIIPJN_01695 9.5e-145 ywiC S YwiC-like protein
EMFIIPJN_01696 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
EMFIIPJN_01697 3.1e-170 rhaR_1 K helix_turn_helix, arabinose operon control protein
EMFIIPJN_01698 1.5e-194 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
EMFIIPJN_01699 2.7e-196 EGP Major facilitator Superfamily
EMFIIPJN_01700 2.3e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
EMFIIPJN_01701 6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
EMFIIPJN_01702 2.2e-233 EGP Major facilitator Superfamily
EMFIIPJN_01703 2.3e-179 tdh 1.1.1.14 C Zinc-binding dehydrogenase
EMFIIPJN_01704 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
EMFIIPJN_01705 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
EMFIIPJN_01706 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
EMFIIPJN_01707 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
EMFIIPJN_01708 8.4e-117
EMFIIPJN_01709 3.4e-112 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
EMFIIPJN_01710 6.3e-185 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EMFIIPJN_01711 8e-110 M Bacterial capsule synthesis protein PGA_cap
EMFIIPJN_01712 6.3e-245 bglA 3.2.1.21 G Glycosyl hydrolase family 1
EMFIIPJN_01713 6.1e-160 U Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01714 5.5e-164 malC U Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01715 1.3e-243 malE G Bacterial extracellular solute-binding protein
EMFIIPJN_01716 1.4e-217 rbsR K helix_turn _helix lactose operon repressor
EMFIIPJN_01717 5.2e-22
EMFIIPJN_01719 5e-74 S EamA-like transporter family
EMFIIPJN_01720 2.5e-20 S EamA-like transporter family
EMFIIPJN_01721 3.7e-238 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EMFIIPJN_01722 6.1e-224 dapC E Aminotransferase class I and II
EMFIIPJN_01723 2.9e-59 fdxA C 4Fe-4S binding domain
EMFIIPJN_01724 1.2e-269 E aromatic amino acid transport protein AroP K03293
EMFIIPJN_01725 2e-214 murB 1.3.1.98 M Cell wall formation
EMFIIPJN_01726 4.1e-25 rpmG J Ribosomal protein L33
EMFIIPJN_01730 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
EMFIIPJN_01731 2.4e-135
EMFIIPJN_01732 2.6e-85 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
EMFIIPJN_01733 1.1e-55 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
EMFIIPJN_01734 4.3e-31 fmdB S Putative regulatory protein
EMFIIPJN_01735 1.8e-105 flgA NO SAF
EMFIIPJN_01736 1.1e-27
EMFIIPJN_01737 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
EMFIIPJN_01738 9.9e-186 T Forkhead associated domain
EMFIIPJN_01739 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
EMFIIPJN_01740 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
EMFIIPJN_01741 4e-147 3.2.1.8 S alpha beta
EMFIIPJN_01742 1.1e-251 pbuO S Permease family
EMFIIPJN_01743 2.1e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
EMFIIPJN_01744 5.1e-171 pstA P Phosphate transport system permease
EMFIIPJN_01745 6.8e-157 pstC P probably responsible for the translocation of the substrate across the membrane
EMFIIPJN_01746 1.3e-202 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
EMFIIPJN_01747 3.8e-142 KT Transcriptional regulatory protein, C terminal
EMFIIPJN_01748 2.6e-207 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
EMFIIPJN_01749 2.1e-241 EGP Sugar (and other) transporter
EMFIIPJN_01750 5.7e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
EMFIIPJN_01751 1.9e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
EMFIIPJN_01752 4.8e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
EMFIIPJN_01753 4.1e-86 ebgC G YhcH YjgK YiaL family protein
EMFIIPJN_01754 0.0 ebgA 3.2.1.23 G Psort location Cytoplasmic, score 8.87
EMFIIPJN_01755 1e-116 pgmB 5.4.2.6 S phosphonoacetaldehyde hydrolase activity
EMFIIPJN_01756 7.4e-153 EG EamA-like transporter family
EMFIIPJN_01757 0.0 kojP 2.4.1.230 GH65 G Glycosyl hydrolase family 65 central catalytic domain
EMFIIPJN_01758 1.9e-152 P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01759 5.3e-170 malC U Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01760 1.8e-237 G Bacterial extracellular solute-binding protein
EMFIIPJN_01761 4.6e-188 K Periplasmic binding protein domain
EMFIIPJN_01762 8e-100 U MarC family integral membrane protein
EMFIIPJN_01763 1.3e-267 pepC 3.4.22.40 E Peptidase C1-like family
EMFIIPJN_01764 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
EMFIIPJN_01765 3.6e-45 D nuclear chromosome segregation
EMFIIPJN_01766 6.3e-125 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
EMFIIPJN_01767 8.4e-151 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
EMFIIPJN_01768 1.4e-198 yfiH Q Multi-copper polyphenol oxidoreductase laccase
EMFIIPJN_01769 5.9e-304 yegQ O Peptidase family U32 C-terminal domain
EMFIIPJN_01770 4.1e-178 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
EMFIIPJN_01771 7.7e-103 rsmD 2.1.1.171 L Conserved hypothetical protein 95
EMFIIPJN_01772 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
EMFIIPJN_01773 2.5e-29 rpmB J Ribosomal L28 family
EMFIIPJN_01774 1.6e-196 yegV G pfkB family carbohydrate kinase
EMFIIPJN_01775 1.1e-234 yxiO S Vacuole effluxer Atg22 like
EMFIIPJN_01776 1.4e-130 K helix_turn_helix, mercury resistance
EMFIIPJN_01777 1.2e-61 T Toxic component of a toxin-antitoxin (TA) module
EMFIIPJN_01778 2.4e-53 relB L RelB antitoxin
EMFIIPJN_01779 1.8e-24 yxiO G Major facilitator Superfamily
EMFIIPJN_01780 3.4e-189 K Helix-turn-helix XRE-family like proteins
EMFIIPJN_01782 3.4e-63 S Alpha/beta hydrolase family
EMFIIPJN_01786 4e-44 XK27_04590 S NADPH-dependent FMN reductase
EMFIIPJN_01788 1.6e-299 pccB I Carboxyl transferase domain
EMFIIPJN_01789 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
EMFIIPJN_01790 4.1e-91 bioY S BioY family
EMFIIPJN_01791 2.6e-149 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
EMFIIPJN_01792 0.0
EMFIIPJN_01793 2.2e-165 QT PucR C-terminal helix-turn-helix domain
EMFIIPJN_01794 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
EMFIIPJN_01795 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
EMFIIPJN_01796 2.5e-146 K Psort location Cytoplasmic, score
EMFIIPJN_01797 7e-110 nusG K Participates in transcription elongation, termination and antitermination
EMFIIPJN_01798 4.7e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
EMFIIPJN_01800 4.9e-229 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
EMFIIPJN_01801 1.1e-218 G polysaccharide deacetylase
EMFIIPJN_01802 5e-196 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
EMFIIPJN_01803 7e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
EMFIIPJN_01804 5.8e-39 rpmA J Ribosomal L27 protein
EMFIIPJN_01805 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
EMFIIPJN_01806 0.0 rne 3.1.26.12 J Ribonuclease E/G family
EMFIIPJN_01807 1.2e-230 dapE 3.5.1.18 E Peptidase dimerisation domain
EMFIIPJN_01808 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
EMFIIPJN_01809 5.7e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
EMFIIPJN_01810 3.2e-149 S Amidohydrolase
EMFIIPJN_01811 2e-201 fucP G Major Facilitator Superfamily
EMFIIPJN_01812 2.8e-148 IQ KR domain
EMFIIPJN_01813 1.1e-250 4.2.1.68 M Enolase C-terminal domain-like
EMFIIPJN_01814 3.5e-191 K Bacterial regulatory proteins, lacI family
EMFIIPJN_01815 3.7e-255 V Efflux ABC transporter, permease protein
EMFIIPJN_01816 5.2e-139 V ATPases associated with a variety of cellular activities
EMFIIPJN_01817 7.2e-29 S Protein of unknown function (DUF1778)
EMFIIPJN_01818 2e-91 K Acetyltransferase (GNAT) family
EMFIIPJN_01819 7.4e-272 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
EMFIIPJN_01820 4.6e-184 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
EMFIIPJN_01821 3.1e-237 hom 1.1.1.3 E Homoserine dehydrogenase
EMFIIPJN_01822 5.6e-54 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
EMFIIPJN_01823 5.1e-55 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
EMFIIPJN_01824 3.7e-304 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
EMFIIPJN_01825 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
EMFIIPJN_01826 1.8e-130 K Bacterial regulatory proteins, tetR family
EMFIIPJN_01827 1.4e-221 G Transmembrane secretion effector
EMFIIPJN_01828 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EMFIIPJN_01829 3.4e-255 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
EMFIIPJN_01830 2.1e-157 ET Bacterial periplasmic substrate-binding proteins
EMFIIPJN_01831 3.7e-120 ytmL P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01832 4e-139 P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01833 1.3e-104 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
EMFIIPJN_01834 3.5e-132 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
EMFIIPJN_01835 1.8e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
EMFIIPJN_01836 2.8e-21 2.7.13.3 T Histidine kinase
EMFIIPJN_01837 3.6e-21 S Bacterial PH domain
EMFIIPJN_01838 2.7e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
EMFIIPJN_01839 8.4e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
EMFIIPJN_01840 1.4e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
EMFIIPJN_01841 5.8e-263 S Calcineurin-like phosphoesterase
EMFIIPJN_01842 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
EMFIIPJN_01843 5e-233 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
EMFIIPJN_01844 9.4e-131
EMFIIPJN_01845 0.0 G N-terminal domain of (some) glycogen debranching enzymes
EMFIIPJN_01846 5.9e-139 P Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01847 4.4e-209 U Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01848 1.1e-207 G Bacterial extracellular solute-binding protein
EMFIIPJN_01849 2.5e-128 K helix_turn _helix lactose operon repressor
EMFIIPJN_01850 1.1e-115 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
EMFIIPJN_01851 8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
EMFIIPJN_01852 2.6e-216 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
EMFIIPJN_01853 8.8e-217 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
EMFIIPJN_01855 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
EMFIIPJN_01856 8.6e-165 S Auxin Efflux Carrier
EMFIIPJN_01857 1.8e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
EMFIIPJN_01858 1.5e-119 S Domain of unknown function (DUF4190)
EMFIIPJN_01859 5e-165
EMFIIPJN_01860 9.2e-236 glf 5.4.99.9 M UDP-galactopyranose mutase
EMFIIPJN_01861 5.5e-45 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
EMFIIPJN_01862 2.2e-58 G Branched-chain amino acid transport system / permease component
EMFIIPJN_01863 1.5e-72 P branched-chain amino acid ABC transporter, permease protein
EMFIIPJN_01864 6.3e-120 G ATPases associated with a variety of cellular activities
EMFIIPJN_01865 3e-81 G ABC-type sugar transport system periplasmic component
EMFIIPJN_01866 3e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
EMFIIPJN_01867 1e-75 xylR GK ROK family
EMFIIPJN_01868 3.3e-36
EMFIIPJN_01869 3.2e-200 M Glycosyltransferase like family 2
EMFIIPJN_01870 2e-242 S Predicted membrane protein (DUF2142)
EMFIIPJN_01871 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
EMFIIPJN_01872 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
EMFIIPJN_01873 2.9e-287 lsgC M transferase activity, transferring glycosyl groups
EMFIIPJN_01874 9.1e-234 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
EMFIIPJN_01875 7.4e-144 rgpC U Transport permease protein
EMFIIPJN_01876 0.0 rgpF M Rhamnan synthesis protein F
EMFIIPJN_01877 1.2e-183 M Glycosyltransferase like family 2
EMFIIPJN_01878 4.5e-171 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
EMFIIPJN_01879 4.3e-288 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
EMFIIPJN_01880 1.2e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
EMFIIPJN_01881 0.0
EMFIIPJN_01882 5.6e-172 rfbJ M Glycosyl transferase family 2
EMFIIPJN_01883 7.4e-189 lytC 3.1.4.46, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
EMFIIPJN_01884 1.9e-248 L PFAM Integrase catalytic
EMFIIPJN_01885 3.6e-231 K Cell envelope-related transcriptional attenuator domain
EMFIIPJN_01886 1.2e-256 V ABC transporter permease
EMFIIPJN_01887 2.8e-184 V ABC transporter
EMFIIPJN_01888 9.6e-146 T HD domain
EMFIIPJN_01889 2.9e-162 S Glutamine amidotransferase domain
EMFIIPJN_01890 0.0 kup P Transport of potassium into the cell
EMFIIPJN_01891 5.3e-186 tatD L TatD related DNase
EMFIIPJN_01892 0.0 yknV V ABC transporter
EMFIIPJN_01893 0.0 mdlA2 V ABC transporter
EMFIIPJN_01894 2.3e-23 S ATPase domain predominantly from Archaea
EMFIIPJN_01895 3.7e-254 S Domain of unknown function (DUF4143)
EMFIIPJN_01896 5.7e-193 G Glycosyl hydrolases family 43
EMFIIPJN_01897 1.4e-153 U Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01898 1.3e-176 U Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01899 1.8e-242 G Bacterial extracellular solute-binding protein
EMFIIPJN_01900 8.1e-196 K helix_turn _helix lactose operon repressor
EMFIIPJN_01901 0.0 lacZ 3.2.1.23 G Beta-galactosidase trimerisation domain
EMFIIPJN_01902 4e-267 S AAA domain
EMFIIPJN_01903 2.4e-60 EGP Major Facilitator Superfamily
EMFIIPJN_01904 4e-34 EGP Major facilitator Superfamily
EMFIIPJN_01905 5.7e-21 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
EMFIIPJN_01906 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
EMFIIPJN_01907 0.0 oppD P Belongs to the ABC transporter superfamily
EMFIIPJN_01908 3.2e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
EMFIIPJN_01909 1e-176 appB EP Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01910 1.2e-264 pepC 3.4.22.40 E Peptidase C1-like family
EMFIIPJN_01911 6.7e-47
EMFIIPJN_01912 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EMFIIPJN_01913 9.4e-121
EMFIIPJN_01914 6.9e-184 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
EMFIIPJN_01916 1.2e-255 G MFS/sugar transport protein
EMFIIPJN_01917 1.6e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
EMFIIPJN_01918 0.0 lmrA2 V ABC transporter transmembrane region
EMFIIPJN_01919 0.0 lmrA1 V ABC transporter, ATP-binding protein
EMFIIPJN_01920 3.9e-90 ydgJ K helix_turn_helix multiple antibiotic resistance protein
EMFIIPJN_01921 2.2e-279 cycA E Amino acid permease
EMFIIPJN_01922 0.0 V FtsX-like permease family
EMFIIPJN_01923 8.9e-130 V ABC transporter
EMFIIPJN_01924 7e-270 aroP E aromatic amino acid transport protein AroP K03293
EMFIIPJN_01925 1.3e-105 S Protein of unknown function, DUF624
EMFIIPJN_01926 6.8e-153 rafG G ABC transporter permease
EMFIIPJN_01927 4.4e-147 malC G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01928 3.7e-185 K Psort location Cytoplasmic, score
EMFIIPJN_01929 2.2e-254 amyE G Bacterial extracellular solute-binding protein
EMFIIPJN_01930 3.6e-102 G Phosphoglycerate mutase family
EMFIIPJN_01931 1.2e-59 S Protein of unknown function (DUF4235)
EMFIIPJN_01932 3.1e-47 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
EMFIIPJN_01933 1.6e-70 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
EMFIIPJN_01934 0.0 pip S YhgE Pip domain protein
EMFIIPJN_01935 2.1e-276 pip S YhgE Pip domain protein
EMFIIPJN_01936 1.8e-40
EMFIIPJN_01937 3.1e-15 S COG NOG14600 non supervised orthologous group
EMFIIPJN_01938 9.2e-10
EMFIIPJN_01939 3.8e-15 S COG NOG14600 non supervised orthologous group
EMFIIPJN_01940 9.2e-10
EMFIIPJN_01941 4.9e-142 cobB2 K Sir2 family
EMFIIPJN_01942 5.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
EMFIIPJN_01943 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
EMFIIPJN_01944 2.9e-154 G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01945 1.1e-143 malC G Binding-protein-dependent transport system inner membrane component
EMFIIPJN_01946 8.9e-245 msmE7 G Bacterial extracellular solute-binding protein
EMFIIPJN_01947 1.2e-230 nagC GK ROK family
EMFIIPJN_01948 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
EMFIIPJN_01949 8.3e-78 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
EMFIIPJN_01950 0.0 yjcE P Sodium/hydrogen exchanger family
EMFIIPJN_01951 2.6e-125 S membrane transporter protein
EMFIIPJN_01952 2.1e-145 ypfH S Phospholipase/Carboxylesterase
EMFIIPJN_01953 1.6e-152
EMFIIPJN_01954 2.2e-110 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
EMFIIPJN_01955 4.3e-35
EMFIIPJN_01956 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
EMFIIPJN_01957 2e-16 K helix_turn _helix lactose operon repressor
EMFIIPJN_01958 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
EMFIIPJN_01959 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
EMFIIPJN_01960 3.5e-206 EGP Major facilitator Superfamily
EMFIIPJN_01961 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EMFIIPJN_01962 5.9e-168 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
EMFIIPJN_01963 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
EMFIIPJN_01964 1.6e-271 KLT Domain of unknown function (DUF4032)
EMFIIPJN_01965 4.4e-155
EMFIIPJN_01966 7.6e-18 tnp7109-21 L Integrase core domain
EMFIIPJN_01967 1.1e-131 K helix_turn _helix lactose operon repressor
EMFIIPJN_01968 4.2e-146 G Periplasmic binding protein domain
EMFIIPJN_01969 8.7e-178 3.6.3.17 G ATPases associated with a variety of cellular activities
EMFIIPJN_01970 5e-142 U Branched-chain amino acid transport system / permease component
EMFIIPJN_01971 1e-185
EMFIIPJN_01972 1.2e-146 tnp3514b L Winged helix-turn helix
EMFIIPJN_01973 6.2e-48 S LPXTG-motif cell wall anchor domain protein
EMFIIPJN_01974 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
EMFIIPJN_01975 6e-137 K UTRA domain
EMFIIPJN_01976 6.4e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
EMFIIPJN_01977 3.7e-45 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
EMFIIPJN_01978 2.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
EMFIIPJN_01979 1.4e-220 2.4.1.166 GT2 M Glycosyltransferase like family 2
EMFIIPJN_01980 5.1e-142 K LytTr DNA-binding domain
EMFIIPJN_01981 3.2e-229 T GHKL domain
EMFIIPJN_01982 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EMFIIPJN_01984 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EMFIIPJN_01985 1.7e-87 nrdI F Probably involved in ribonucleotide reductase function
EMFIIPJN_01986 2e-42 nrdH O Glutaredoxin
EMFIIPJN_01987 9.8e-123 S Psort location CytoplasmicMembrane, score
EMFIIPJN_01988 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
EMFIIPJN_01989 3.1e-121 K Helix-turn-helix XRE-family like proteins
EMFIIPJN_01990 7.6e-126 S Protein of unknown function (DUF3990)
EMFIIPJN_01991 7e-71 kcsA U Ion channel
EMFIIPJN_01992 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
EMFIIPJN_01993 0.0 KLT Protein tyrosine kinase
EMFIIPJN_01994 7.5e-135 O Thioredoxin
EMFIIPJN_01996 1.7e-215 S G5
EMFIIPJN_01997 4.4e-169 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
EMFIIPJN_01998 1.5e-177 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
EMFIIPJN_01999 1.8e-110 S LytR cell envelope-related transcriptional attenuator
EMFIIPJN_02000 3.2e-283 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
EMFIIPJN_02001 2.8e-166 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
EMFIIPJN_02002 0.0
EMFIIPJN_02003 0.0 murJ KLT MviN-like protein
EMFIIPJN_02004 7e-176 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
EMFIIPJN_02005 8e-222 parB K Belongs to the ParB family
EMFIIPJN_02006 2.4e-173 parA D CobQ CobB MinD ParA nucleotide binding domain protein
EMFIIPJN_02007 1.2e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
EMFIIPJN_02008 3e-93 jag S Putative single-stranded nucleic acids-binding domain
EMFIIPJN_02009 5.8e-183 yidC U Membrane protein insertase, YidC Oxa1 family
EMFIIPJN_02010 1.6e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
EMFIIPJN_02011 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)