ORF_ID e_value Gene_name EC_number CAZy COGs Description
PBKDCIHP_00001 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PBKDCIHP_00002 2.7e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PBKDCIHP_00003 9.9e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PBKDCIHP_00004 4.2e-83 S Protein of unknown function (DUF721)
PBKDCIHP_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBKDCIHP_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBKDCIHP_00007 3.2e-50 S Transmembrane domain of unknown function (DUF3566)
PBKDCIHP_00008 2.6e-183 lacR K Transcriptional regulator, LacI family
PBKDCIHP_00009 2.9e-16 lacS G Psort location CytoplasmicMembrane, score 10.00
PBKDCIHP_00010 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PBKDCIHP_00011 1.1e-206 V VanZ like family
PBKDCIHP_00013 4.3e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PBKDCIHP_00014 5.3e-197 S Psort location CytoplasmicMembrane, score
PBKDCIHP_00017 1.3e-122 S Protein of unknown function DUF45
PBKDCIHP_00019 3.6e-257 S Domain of unknown function (DUF4143)
PBKDCIHP_00020 5.6e-83 dps P Belongs to the Dps family
PBKDCIHP_00021 2.7e-236 ytfL P Transporter associated domain
PBKDCIHP_00022 4.8e-210 S AAA ATPase domain
PBKDCIHP_00023 6.6e-122 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PBKDCIHP_00024 1e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
PBKDCIHP_00025 0.0 trxB2 1.8.1.9 C Thioredoxin domain
PBKDCIHP_00026 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
PBKDCIHP_00027 4.8e-160
PBKDCIHP_00028 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
PBKDCIHP_00029 3.6e-279 pelF GT4 M Domain of unknown function (DUF3492)
PBKDCIHP_00030 3.8e-282 pelG S Putative exopolysaccharide Exporter (EPS-E)
PBKDCIHP_00031 0.0 cotH M CotH kinase protein
PBKDCIHP_00032 4.1e-158 P VTC domain
PBKDCIHP_00033 8.5e-111 S Domain of unknown function (DUF4956)
PBKDCIHP_00034 0.0 yliE T Putative diguanylate phosphodiesterase
PBKDCIHP_00035 8.5e-125 S AAA domain
PBKDCIHP_00036 2.3e-311 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PBKDCIHP_00037 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PBKDCIHP_00038 0.0 yjjP S Threonine/Serine exporter, ThrE
PBKDCIHP_00039 5.2e-298 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PBKDCIHP_00040 1.3e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PBKDCIHP_00041 1.2e-307 S Amidohydrolase family
PBKDCIHP_00042 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PBKDCIHP_00043 1.2e-38 S Protein of unknown function (DUF3073)
PBKDCIHP_00044 3.6e-112 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PBKDCIHP_00045 2.7e-208 2.7.13.3 T Histidine kinase
PBKDCIHP_00046 3e-222 EGP Major Facilitator Superfamily
PBKDCIHP_00047 3.7e-102 I Sterol carrier protein
PBKDCIHP_00048 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PBKDCIHP_00049 2.6e-35
PBKDCIHP_00050 2.5e-122 gluP 3.4.21.105 S Rhomboid family
PBKDCIHP_00051 2.6e-69 crgA D Involved in cell division
PBKDCIHP_00052 1.8e-118 S Bacterial protein of unknown function (DUF881)
PBKDCIHP_00053 3.2e-228 srtA 3.4.22.70 M Sortase family
PBKDCIHP_00054 2.6e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
PBKDCIHP_00055 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
PBKDCIHP_00056 6.3e-171 T Protein tyrosine kinase
PBKDCIHP_00057 4.8e-263 pbpA M penicillin-binding protein
PBKDCIHP_00058 6.9e-279 rodA D Belongs to the SEDS family
PBKDCIHP_00059 1.8e-271 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
PBKDCIHP_00060 2.1e-75 fhaB T Inner membrane component of T3SS, cytoplasmic domain
PBKDCIHP_00061 2e-129 fhaA T Protein of unknown function (DUF2662)
PBKDCIHP_00062 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
PBKDCIHP_00063 5.8e-213 pldB 3.1.1.5 I Serine aminopeptidase, S33
PBKDCIHP_00064 3.4e-91 hsp20 O Hsp20/alpha crystallin family
PBKDCIHP_00065 1.6e-177 yddG EG EamA-like transporter family
PBKDCIHP_00066 2.4e-20
PBKDCIHP_00067 3.5e-255 S Putative esterase
PBKDCIHP_00068 0.0 lysX S Uncharacterised conserved protein (DUF2156)
PBKDCIHP_00069 2e-199 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PBKDCIHP_00070 2e-132 S Pyridoxamine 5'-phosphate oxidase
PBKDCIHP_00071 3.6e-199 S Fic/DOC family
PBKDCIHP_00072 1.5e-160 M Glycosyltransferase like family 2
PBKDCIHP_00073 0.0 KL Domain of unknown function (DUF3427)
PBKDCIHP_00074 1.1e-74 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PBKDCIHP_00075 1.7e-51 ybjQ S Putative heavy-metal-binding
PBKDCIHP_00076 4.1e-145 yplQ S Haemolysin-III related
PBKDCIHP_00078 1.3e-262 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PBKDCIHP_00079 5.7e-214 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
PBKDCIHP_00080 0.0 cadA P E1-E2 ATPase
PBKDCIHP_00081 4.5e-277 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
PBKDCIHP_00082 1.5e-172 htpX O Belongs to the peptidase M48B family
PBKDCIHP_00084 5.6e-172 yicL EG EamA-like transporter family
PBKDCIHP_00085 1.1e-195 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PBKDCIHP_00086 1.4e-245 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PBKDCIHP_00087 2.2e-282 clcA P Voltage gated chloride channel
PBKDCIHP_00088 1.8e-134 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PBKDCIHP_00089 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PBKDCIHP_00090 7.2e-51 natB E Receptor family ligand binding region
PBKDCIHP_00091 3.2e-203 K helix_turn _helix lactose operon repressor
PBKDCIHP_00093 5.9e-296 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
PBKDCIHP_00094 1.7e-277 scrT G Transporter major facilitator family protein
PBKDCIHP_00095 1.5e-178 K helix_turn _helix lactose operon repressor
PBKDCIHP_00096 4.7e-252 yhjE EGP Sugar (and other) transporter
PBKDCIHP_00097 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PBKDCIHP_00098 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PBKDCIHP_00099 2.8e-148 S Psort location Cytoplasmic, score
PBKDCIHP_00100 3.5e-191 K Transcriptional regulator
PBKDCIHP_00101 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PBKDCIHP_00102 1.4e-187 K Psort location Cytoplasmic, score
PBKDCIHP_00103 0.0 M cell wall anchor domain protein
PBKDCIHP_00104 0.0 M domain protein
PBKDCIHP_00105 1.6e-174 3.4.22.70 M Sortase family
PBKDCIHP_00106 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PBKDCIHP_00107 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
PBKDCIHP_00108 2.9e-232 malE G Bacterial extracellular solute-binding protein
PBKDCIHP_00109 2e-253 malF G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00110 4e-162 malG G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00111 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PBKDCIHP_00112 1.1e-175 S HAD-hyrolase-like
PBKDCIHP_00113 2.2e-145 traX S TraX protein
PBKDCIHP_00114 3.7e-193 K Psort location Cytoplasmic, score
PBKDCIHP_00115 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
PBKDCIHP_00116 0.0 dnaK O Heat shock 70 kDa protein
PBKDCIHP_00117 1e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PBKDCIHP_00118 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
PBKDCIHP_00119 1.2e-103 hspR K transcriptional regulator, MerR family
PBKDCIHP_00120 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
PBKDCIHP_00121 5.1e-115 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
PBKDCIHP_00122 5.6e-141 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PBKDCIHP_00123 5.1e-127 S HAD hydrolase, family IA, variant 3
PBKDCIHP_00124 2.8e-134 dedA S SNARE associated Golgi protein
PBKDCIHP_00125 5.8e-125 cpaE D bacterial-type flagellum organization
PBKDCIHP_00126 2e-191 cpaF U Type II IV secretion system protein
PBKDCIHP_00127 1.2e-74 U Type ii secretion system
PBKDCIHP_00128 6.8e-116 gspF NU Type II secretion system (T2SS), protein F
PBKDCIHP_00129 3.2e-41 S Protein of unknown function (DUF4244)
PBKDCIHP_00130 1.4e-57 U TadE-like protein
PBKDCIHP_00131 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
PBKDCIHP_00132 7.9e-213 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
PBKDCIHP_00133 3.5e-95 K Bacterial regulatory proteins, tetR family
PBKDCIHP_00134 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
PBKDCIHP_00135 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PBKDCIHP_00136 3.4e-201 3.4.22.70 M Sortase family
PBKDCIHP_00137 8.8e-40 V Abi-like protein
PBKDCIHP_00138 8e-105 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PBKDCIHP_00139 7.6e-73 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PBKDCIHP_00140 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PBKDCIHP_00141 3e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
PBKDCIHP_00142 2.6e-213 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PBKDCIHP_00143 9.6e-112
PBKDCIHP_00144 9.9e-174 L Domain of unknown function (DUF4862)
PBKDCIHP_00145 2.6e-167 2.7.1.2 GK ROK family
PBKDCIHP_00146 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PBKDCIHP_00147 9.8e-160 3.5.1.106 I carboxylic ester hydrolase activity
PBKDCIHP_00148 1.5e-302 E Bacterial extracellular solute-binding proteins, family 5 Middle
PBKDCIHP_00149 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00150 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
PBKDCIHP_00151 1.7e-148 oppF E ATPases associated with a variety of cellular activities
PBKDCIHP_00152 2.5e-178 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PBKDCIHP_00153 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PBKDCIHP_00154 9.1e-14 nagA 3.5.1.25 G Amidohydrolase family
PBKDCIHP_00155 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
PBKDCIHP_00156 2.6e-244 P Domain of unknown function (DUF4143)
PBKDCIHP_00157 9e-153 K FCD
PBKDCIHP_00158 6.8e-273 S Calcineurin-like phosphoesterase
PBKDCIHP_00159 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PBKDCIHP_00160 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PBKDCIHP_00161 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_00162 1.4e-123 insK L Integrase core domain
PBKDCIHP_00163 1.6e-165 3.6.1.27 I PAP2 superfamily
PBKDCIHP_00164 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PBKDCIHP_00165 5.9e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PBKDCIHP_00166 2.3e-207 holB 2.7.7.7 L DNA polymerase III
PBKDCIHP_00167 5.2e-105 K helix_turn _helix lactose operon repressor
PBKDCIHP_00168 3.3e-37 ptsH G PTS HPr component phosphorylation site
PBKDCIHP_00170 7.8e-294 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PBKDCIHP_00171 1.5e-104 S Phosphatidylethanolamine-binding protein
PBKDCIHP_00172 2.2e-311 pepD E Peptidase family C69
PBKDCIHP_00173 3.4e-288 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
PBKDCIHP_00174 6.7e-62 S Macrophage migration inhibitory factor (MIF)
PBKDCIHP_00175 8.4e-96 S GtrA-like protein
PBKDCIHP_00176 9.7e-248 EGP Major facilitator Superfamily
PBKDCIHP_00177 2.6e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
PBKDCIHP_00178 2e-158
PBKDCIHP_00179 1.5e-60 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PBKDCIHP_00180 1e-143 S Protein of unknown function (DUF805)
PBKDCIHP_00181 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PBKDCIHP_00182 1.8e-170 V Abi-like protein
PBKDCIHP_00183 1.9e-49 3.1.21.3 V COG0732 Restriction endonuclease S subunits
PBKDCIHP_00184 4.4e-67 3.1.21.3 L PFAM restriction modification system DNA specificity domain
PBKDCIHP_00186 3.1e-292 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
PBKDCIHP_00187 3e-292 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PBKDCIHP_00190 1.3e-109 L Phage integrase, N-terminal SAM-like domain
PBKDCIHP_00192 4.8e-295 efeU_1 P Iron permease FTR1 family
PBKDCIHP_00193 2.8e-99 tpd P Fe2+ transport protein
PBKDCIHP_00194 7.7e-233 S Predicted membrane protein (DUF2318)
PBKDCIHP_00195 7e-221 macB_2 V ABC transporter permease
PBKDCIHP_00196 2.1e-199 Z012_06715 V FtsX-like permease family
PBKDCIHP_00197 4.5e-146 macB V ABC transporter, ATP-binding protein
PBKDCIHP_00198 1.7e-67 S FMN_bind
PBKDCIHP_00199 3.2e-101 K Psort location Cytoplasmic, score 8.87
PBKDCIHP_00200 2e-305 pip S YhgE Pip domain protein
PBKDCIHP_00201 0.0 pip S YhgE Pip domain protein
PBKDCIHP_00202 2.5e-253 S Putative ABC-transporter type IV
PBKDCIHP_00203 1.5e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PBKDCIHP_00204 1.3e-140 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PBKDCIHP_00205 3.7e-193 opcA G Glucose-6-phosphate dehydrogenase subunit
PBKDCIHP_00206 7.8e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PBKDCIHP_00207 3.1e-291 3.5.2.6 V Beta-lactamase enzyme family
PBKDCIHP_00209 9.4e-302 pepD E Peptidase family C69
PBKDCIHP_00210 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
PBKDCIHP_00211 1e-151 icaR K Bacterial regulatory proteins, tetR family
PBKDCIHP_00212 2.2e-171 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PBKDCIHP_00213 1e-227 amt U Ammonium Transporter Family
PBKDCIHP_00214 1e-54 glnB K Nitrogen regulatory protein P-II
PBKDCIHP_00215 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
PBKDCIHP_00216 4.6e-239 dinF V MatE
PBKDCIHP_00217 1.3e-252 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PBKDCIHP_00218 8e-263 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
PBKDCIHP_00219 1.6e-140 cobQ S CobB/CobQ-like glutamine amidotransferase domain
PBKDCIHP_00220 1.8e-36 S granule-associated protein
PBKDCIHP_00221 0.0 ubiB S ABC1 family
PBKDCIHP_00223 4.2e-72 K Periplasmic binding protein domain
PBKDCIHP_00224 2.6e-63 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
PBKDCIHP_00225 2.4e-28 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
PBKDCIHP_00226 2.6e-48 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
PBKDCIHP_00227 4.5e-155 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PBKDCIHP_00228 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PBKDCIHP_00229 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
PBKDCIHP_00230 4e-76 ssb1 L Single-stranded DNA-binding protein
PBKDCIHP_00231 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PBKDCIHP_00232 2.7e-71 rplI J Binds to the 23S rRNA
PBKDCIHP_00234 6.9e-117 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PBKDCIHP_00235 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
PBKDCIHP_00236 2.1e-42 csoR S Metal-sensitive transcriptional repressor
PBKDCIHP_00237 1.6e-210 rmuC S RmuC family
PBKDCIHP_00238 3.1e-110 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PBKDCIHP_00239 2.4e-170 spoU 2.1.1.185 J RNA methyltransferase TrmH family
PBKDCIHP_00240 4.2e-167 V ABC transporter
PBKDCIHP_00241 6.9e-179
PBKDCIHP_00242 8.7e-161 K Psort location Cytoplasmic, score
PBKDCIHP_00243 5.9e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PBKDCIHP_00244 3.9e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PBKDCIHP_00245 7.4e-283 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PBKDCIHP_00246 4e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
PBKDCIHP_00247 3.3e-52 S Protein of unknown function (DUF2469)
PBKDCIHP_00248 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
PBKDCIHP_00249 2.7e-293 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PBKDCIHP_00251 1.9e-37 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
PBKDCIHP_00252 2.5e-167 L Transposase
PBKDCIHP_00253 5.1e-50 K helix_turn_helix, arabinose operon control protein
PBKDCIHP_00254 2.6e-154 araN G Bacterial extracellular solute-binding protein
PBKDCIHP_00255 9.5e-121 lacF P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00256 1.3e-114 araQ U Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00257 1.4e-131 rafA 3.2.1.22 G alpha-galactosidase
PBKDCIHP_00258 1.2e-21 L Helix-turn-helix domain
PBKDCIHP_00259 6.8e-63 tyrA 5.4.99.5 E Chorismate mutase type II
PBKDCIHP_00260 0.0 S domain protein
PBKDCIHP_00261 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PBKDCIHP_00262 1.2e-280 E Bacterial extracellular solute-binding proteins, family 5 Middle
PBKDCIHP_00263 1.3e-125 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PBKDCIHP_00264 1.8e-139 KT Transcriptional regulatory protein, C terminal
PBKDCIHP_00265 1.9e-116
PBKDCIHP_00266 1e-86 mntP P Probably functions as a manganese efflux pump
PBKDCIHP_00267 4e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PBKDCIHP_00268 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PBKDCIHP_00269 0.0 K RNA polymerase II activating transcription factor binding
PBKDCIHP_00271 1.6e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PBKDCIHP_00272 6.4e-148 atpB C it plays a direct role in the translocation of protons across the membrane
PBKDCIHP_00273 1.7e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PBKDCIHP_00274 2.9e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PBKDCIHP_00275 2.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PBKDCIHP_00276 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PBKDCIHP_00277 5.5e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PBKDCIHP_00278 6.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PBKDCIHP_00279 3.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PBKDCIHP_00280 1.4e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PBKDCIHP_00281 5.5e-159 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
PBKDCIHP_00282 2.6e-185
PBKDCIHP_00283 3e-179
PBKDCIHP_00284 4.5e-172 trxA2 O Tetratricopeptide repeat
PBKDCIHP_00285 1.2e-117 cyaA 4.6.1.1 S CYTH
PBKDCIHP_00288 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
PBKDCIHP_00289 8.8e-189 plsC2 2.3.1.51 I Phosphate acyltransferases
PBKDCIHP_00290 2.7e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PBKDCIHP_00291 2.8e-229 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PBKDCIHP_00292 9.9e-219 P Bacterial extracellular solute-binding protein
PBKDCIHP_00293 2.9e-160 U Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00294 7e-151 U Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00295 8.2e-238 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PBKDCIHP_00296 1.9e-184 S CAAX protease self-immunity
PBKDCIHP_00297 1.7e-137 M Mechanosensitive ion channel
PBKDCIHP_00298 2.5e-272 aspA 4.3.1.1 E Fumarase C C-terminus
PBKDCIHP_00299 9.3e-11 L Transposase DDE domain
PBKDCIHP_00300 5.7e-133 S Sulfite exporter TauE/SafE
PBKDCIHP_00301 2.8e-262 aslB C Iron-sulfur cluster-binding domain
PBKDCIHP_00302 3.8e-193 K helix_turn _helix lactose operon repressor
PBKDCIHP_00303 2.1e-306 Z012_09690 P Domain of unknown function (DUF4976)
PBKDCIHP_00304 4.1e-264 G Bacterial extracellular solute-binding protein
PBKDCIHP_00305 2.9e-165 malC P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00306 3.5e-177 P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00307 2.2e-237 S AAA domain
PBKDCIHP_00308 3e-41 L Transposase, Mutator family
PBKDCIHP_00309 1.3e-106 K Bacterial regulatory proteins, tetR family
PBKDCIHP_00310 1.9e-258 MA20_36090 S Psort location Cytoplasmic, score 8.87
PBKDCIHP_00311 1.2e-85 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PBKDCIHP_00312 2e-80 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PBKDCIHP_00313 3.3e-71 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
PBKDCIHP_00314 4.4e-17 P Sodium/hydrogen exchanger family
PBKDCIHP_00316 1e-80
PBKDCIHP_00317 0.0 1.3.98.1, 3.2.1.21 GH3 M Conserved repeat domain
PBKDCIHP_00318 3.1e-276 M LPXTG cell wall anchor motif
PBKDCIHP_00320 1.2e-50
PBKDCIHP_00321 1.7e-18
PBKDCIHP_00322 7.6e-110
PBKDCIHP_00323 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PBKDCIHP_00324 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PBKDCIHP_00325 1.4e-123 insK L Integrase core domain
PBKDCIHP_00326 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_00327 8.7e-117 V ABC transporter, ATP-binding protein
PBKDCIHP_00328 6.9e-34 macB_7 V FtsX-like permease family
PBKDCIHP_00329 9.8e-90 lemA S LemA family
PBKDCIHP_00330 0.0 S Predicted membrane protein (DUF2207)
PBKDCIHP_00331 1.9e-10 S Predicted membrane protein (DUF2207)
PBKDCIHP_00332 2.2e-103 S Predicted membrane protein (DUF2207)
PBKDCIHP_00333 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_00334 1.4e-123 insK L Integrase core domain
PBKDCIHP_00335 4e-91 S Predicted membrane protein (DUF2207)
PBKDCIHP_00336 1.5e-19
PBKDCIHP_00337 7e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
PBKDCIHP_00338 4.2e-200 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PBKDCIHP_00339 3.7e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PBKDCIHP_00340 1e-34 CP_0960 S Belongs to the UPF0109 family
PBKDCIHP_00341 5.9e-62 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PBKDCIHP_00342 4.2e-205 S Endonuclease/Exonuclease/phosphatase family
PBKDCIHP_00343 1.8e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PBKDCIHP_00344 1.9e-161 P Cation efflux family
PBKDCIHP_00345 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
PBKDCIHP_00346 9.5e-135 guaA1 6.3.5.2 F Peptidase C26
PBKDCIHP_00347 0.0 yjjK S ABC transporter
PBKDCIHP_00348 3.9e-72 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
PBKDCIHP_00349 3.9e-44 stbC S Plasmid stability protein
PBKDCIHP_00350 4e-93 ilvN 2.2.1.6 E ACT domain
PBKDCIHP_00351 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
PBKDCIHP_00352 9.7e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PBKDCIHP_00353 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PBKDCIHP_00354 7.6e-117 yceD S Uncharacterized ACR, COG1399
PBKDCIHP_00355 3.6e-71
PBKDCIHP_00356 6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PBKDCIHP_00357 2.4e-49 S Protein of unknown function (DUF3039)
PBKDCIHP_00358 6e-196 yghZ C Aldo/keto reductase family
PBKDCIHP_00359 6.3e-78 soxR K MerR, DNA binding
PBKDCIHP_00360 3.7e-119
PBKDCIHP_00361 2.8e-249 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PBKDCIHP_00362 1.1e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PBKDCIHP_00363 1.3e-137 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PBKDCIHP_00364 1.4e-176 S Auxin Efflux Carrier
PBKDCIHP_00367 0.0 pgi 5.3.1.9 G Belongs to the GPI family
PBKDCIHP_00368 9.4e-264 abcT3 P ATPases associated with a variety of cellular activities
PBKDCIHP_00369 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00371 8.1e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PBKDCIHP_00372 3.8e-165 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PBKDCIHP_00373 1.4e-158 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PBKDCIHP_00374 2.8e-210 K helix_turn _helix lactose operon repressor
PBKDCIHP_00375 9e-09 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
PBKDCIHP_00376 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PBKDCIHP_00377 1.1e-40 araE EGP Major facilitator Superfamily
PBKDCIHP_00378 5.9e-21 araE EGP Major facilitator Superfamily
PBKDCIHP_00379 0.0 cydD V ABC transporter transmembrane region
PBKDCIHP_00380 7.1e-261 G Bacterial extracellular solute-binding protein
PBKDCIHP_00381 9.1e-170 malC G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00382 4.4e-167 G ABC transporter permease
PBKDCIHP_00383 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PBKDCIHP_00384 3.6e-191 K helix_turn _helix lactose operon repressor
PBKDCIHP_00385 0.0 ganB 3.2.1.89 G Glycosyl hydrolase family 53
PBKDCIHP_00386 3.3e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
PBKDCIHP_00387 7.8e-140 L Protein of unknown function (DUF1524)
PBKDCIHP_00388 4.6e-236 mntH P H( )-stimulated, divalent metal cation uptake system
PBKDCIHP_00389 2.2e-277 EGP Major facilitator Superfamily
PBKDCIHP_00390 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
PBKDCIHP_00391 3.8e-235 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PBKDCIHP_00392 9.7e-109 3.1.3.48 T Low molecular weight phosphatase family
PBKDCIHP_00393 4.6e-114 S Psort location CytoplasmicMembrane, score 9.99
PBKDCIHP_00395 9.5e-187 L Transposase and inactivated derivatives IS30 family
PBKDCIHP_00396 2e-139 M Psort location Cytoplasmic, score 8.87
PBKDCIHP_00397 1.7e-52 GT4 M Psort location Cytoplasmic, score 8.87
PBKDCIHP_00398 1.2e-07
PBKDCIHP_00399 8.9e-63 C Polysaccharide pyruvyl transferase
PBKDCIHP_00400 2.9e-119 S Psort location CytoplasmicMembrane, score 9.99
PBKDCIHP_00401 1.3e-46 M Glycosyltransferase like family 2
PBKDCIHP_00402 1.2e-178 menD 2.2.1.9 H Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
PBKDCIHP_00403 9e-71 L Transposase, Mutator family
PBKDCIHP_00404 1.1e-61 S enterobacterial common antigen metabolic process
PBKDCIHP_00405 1.5e-07 gumF G Fucose 4-O-acetylase and related acetyltransferases
PBKDCIHP_00406 5.9e-14 pslL G Acyltransferase family
PBKDCIHP_00407 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_00408 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_00409 9.4e-63 L Transposase, Mutator family
PBKDCIHP_00410 1.2e-25 L Transposase, Mutator family
PBKDCIHP_00411 3.9e-07
PBKDCIHP_00413 1.4e-10 L HTH-like domain
PBKDCIHP_00414 5e-21 L PFAM Integrase catalytic
PBKDCIHP_00415 1.4e-86
PBKDCIHP_00416 5.2e-67
PBKDCIHP_00417 2.9e-30 L PFAM Integrase catalytic
PBKDCIHP_00418 2.5e-39 S Protein of unknown function (DUF3800)
PBKDCIHP_00419 5.8e-12 L transposase and inactivated derivatives, IS30 family
PBKDCIHP_00420 1.2e-263 S Psort location CytoplasmicMembrane, score 9.99
PBKDCIHP_00421 2.4e-69
PBKDCIHP_00422 3.4e-237 wcoI DM Psort location CytoplasmicMembrane, score
PBKDCIHP_00423 2.2e-145
PBKDCIHP_00424 2.5e-170 S G5
PBKDCIHP_00425 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
PBKDCIHP_00426 5.1e-119 F Domain of unknown function (DUF4916)
PBKDCIHP_00427 1.4e-158 mhpC I Alpha/beta hydrolase family
PBKDCIHP_00428 3.7e-211 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PBKDCIHP_00429 5.9e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PBKDCIHP_00430 5.5e-225 S Uncharacterized conserved protein (DUF2183)
PBKDCIHP_00431 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
PBKDCIHP_00432 5.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PBKDCIHP_00433 1.6e-216 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
PBKDCIHP_00434 2.1e-134 glxR K helix_turn_helix, cAMP Regulatory protein
PBKDCIHP_00435 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PBKDCIHP_00436 5.7e-231 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
PBKDCIHP_00437 5.2e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PBKDCIHP_00438 6.8e-122 glpR K DeoR C terminal sensor domain
PBKDCIHP_00439 6.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
PBKDCIHP_00440 2e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
PBKDCIHP_00441 6.4e-44 gcvR T Belongs to the UPF0237 family
PBKDCIHP_00442 3.2e-253 S UPF0210 protein
PBKDCIHP_00443 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PBKDCIHP_00444 7e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
PBKDCIHP_00445 2.3e-128
PBKDCIHP_00446 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBKDCIHP_00447 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBKDCIHP_00448 0.0 E Transglutaminase-like superfamily
PBKDCIHP_00449 2.5e-239 S Protein of unknown function DUF58
PBKDCIHP_00450 0.0 S Fibronectin type 3 domain
PBKDCIHP_00451 1.8e-220 KLT Protein tyrosine kinase
PBKDCIHP_00452 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
PBKDCIHP_00453 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
PBKDCIHP_00454 3.3e-234 G Major Facilitator Superfamily
PBKDCIHP_00455 6.4e-134 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PBKDCIHP_00456 1.7e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PBKDCIHP_00457 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PBKDCIHP_00458 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
PBKDCIHP_00459 1.2e-258 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PBKDCIHP_00460 7.5e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PBKDCIHP_00461 3.9e-265 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
PBKDCIHP_00462 1.6e-205 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PBKDCIHP_00463 1.3e-202 ftsE D Cell division ATP-binding protein FtsE
PBKDCIHP_00464 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
PBKDCIHP_00465 3.4e-146 usp 3.5.1.28 CBM50 D CHAP domain protein
PBKDCIHP_00466 6.3e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PBKDCIHP_00467 3.6e-142 pknD ET ABC transporter, substrate-binding protein, family 3
PBKDCIHP_00468 3.4e-169 pknD ET ABC transporter, substrate-binding protein, family 3
PBKDCIHP_00469 1.6e-153 yecS E Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00470 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
PBKDCIHP_00471 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PBKDCIHP_00472 3.1e-141 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
PBKDCIHP_00473 1.5e-186 K Periplasmic binding protein domain
PBKDCIHP_00474 2.2e-168 malC G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00475 4.4e-167 G ABC transporter permease
PBKDCIHP_00476 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PBKDCIHP_00477 1.7e-259 G Bacterial extracellular solute-binding protein
PBKDCIHP_00478 4e-278 G Bacterial extracellular solute-binding protein
PBKDCIHP_00479 6.9e-144 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PBKDCIHP_00480 3.4e-289 E ABC transporter, substrate-binding protein, family 5
PBKDCIHP_00481 2.5e-167 P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00482 2.4e-149 EP Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00483 6.5e-137 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
PBKDCIHP_00484 1.3e-137 sapF E ATPases associated with a variety of cellular activities
PBKDCIHP_00485 9.7e-194 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
PBKDCIHP_00486 4.5e-219 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PBKDCIHP_00487 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PBKDCIHP_00488 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PBKDCIHP_00489 6.5e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PBKDCIHP_00490 1.1e-272 yhdG E aromatic amino acid transport protein AroP K03293
PBKDCIHP_00491 4.5e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PBKDCIHP_00492 1.2e-244 dgt 3.1.5.1 F Phosphohydrolase-associated domain
PBKDCIHP_00493 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PBKDCIHP_00494 2.6e-155 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PBKDCIHP_00495 9.6e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PBKDCIHP_00496 4.2e-294 EK Alanine-glyoxylate amino-transferase
PBKDCIHP_00497 8.5e-210 ybiR P Citrate transporter
PBKDCIHP_00498 3.3e-30
PBKDCIHP_00500 2.8e-42 G Alpha-L-arabinofuranosidase C-terminal domain
PBKDCIHP_00501 1.3e-159 K Helix-turn-helix domain, rpiR family
PBKDCIHP_00504 4.3e-258 G Bacterial extracellular solute-binding protein
PBKDCIHP_00505 9.9e-225 K helix_turn _helix lactose operon repressor
PBKDCIHP_00506 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PBKDCIHP_00507 3.6e-15 L Psort location Cytoplasmic, score 8.87
PBKDCIHP_00508 0.0 E ABC transporter, substrate-binding protein, family 5
PBKDCIHP_00509 8.5e-87 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
PBKDCIHP_00510 1.7e-129 V ATPases associated with a variety of cellular activities
PBKDCIHP_00511 5.2e-184 M Conserved repeat domain
PBKDCIHP_00512 2.1e-277 macB_8 V MacB-like periplasmic core domain
PBKDCIHP_00513 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PBKDCIHP_00514 2.4e-181 adh3 C Zinc-binding dehydrogenase
PBKDCIHP_00515 5.2e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PBKDCIHP_00516 8.8e-223 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PBKDCIHP_00517 1.2e-68 zur P Belongs to the Fur family
PBKDCIHP_00518 2.6e-84 ylbB V FtsX-like permease family
PBKDCIHP_00519 5.8e-28 ylbB V FtsX-like permease family
PBKDCIHP_00520 1.4e-70 XK27_06785 V ABC transporter
PBKDCIHP_00521 3.5e-63
PBKDCIHP_00522 3.4e-46 zur P Ferric uptake regulator family
PBKDCIHP_00523 7.8e-140 S TIGRFAM TIGR03943 family protein
PBKDCIHP_00524 4.2e-174 ycgR S Predicted permease
PBKDCIHP_00525 1e-25 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
PBKDCIHP_00526 1.3e-18 J Ribosomal L32p protein family
PBKDCIHP_00527 1.1e-14 rpmJ J Ribosomal protein L36
PBKDCIHP_00528 4.4e-34 rpmE2 J Ribosomal protein L31
PBKDCIHP_00529 2.5e-44 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PBKDCIHP_00530 1.4e-20 rpmG J Ribosomal protein L33
PBKDCIHP_00531 3.9e-29 rpmB J Ribosomal L28 family
PBKDCIHP_00532 1.5e-98 S cobalamin synthesis protein
PBKDCIHP_00533 7.3e-156 P Zinc-uptake complex component A periplasmic
PBKDCIHP_00534 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PBKDCIHP_00535 1.8e-295 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
PBKDCIHP_00536 1.6e-241 purD 6.3.4.13 F Belongs to the GARS family
PBKDCIHP_00537 1.6e-183 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PBKDCIHP_00538 2.7e-293 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PBKDCIHP_00539 5.3e-300 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
PBKDCIHP_00540 2.3e-31
PBKDCIHP_00541 1.5e-13 C Aldo/keto reductase family
PBKDCIHP_00542 4.7e-102 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
PBKDCIHP_00543 1.4e-108 Q D-alanine [D-alanyl carrier protein] ligase activity
PBKDCIHP_00544 1.8e-251 Q D-alanine [D-alanyl carrier protein] ligase activity
PBKDCIHP_00545 6.3e-222 I alpha/beta hydrolase fold
PBKDCIHP_00546 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
PBKDCIHP_00547 9.5e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PBKDCIHP_00548 6.7e-224 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PBKDCIHP_00549 1e-229 mtnE 2.6.1.83 E Aminotransferase class I and II
PBKDCIHP_00550 5.2e-220 M Glycosyl transferase 4-like domain
PBKDCIHP_00551 1.6e-196 ltaE 4.1.2.48 E Beta-eliminating lyase
PBKDCIHP_00553 6.6e-111 yocS S SBF-like CPA transporter family (DUF4137)
PBKDCIHP_00554 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PBKDCIHP_00555 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PBKDCIHP_00556 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PBKDCIHP_00557 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PBKDCIHP_00558 3.5e-129 tmp1 S Domain of unknown function (DUF4391)
PBKDCIHP_00559 7.8e-146 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
PBKDCIHP_00560 2.7e-186 MA20_14895 S Conserved hypothetical protein 698
PBKDCIHP_00561 5e-30 S Psort location CytoplasmicMembrane, score
PBKDCIHP_00562 3.6e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PBKDCIHP_00563 1.6e-86 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PBKDCIHP_00564 1.7e-67 K MerR family regulatory protein
PBKDCIHP_00565 1.5e-194 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PBKDCIHP_00566 1.1e-08 S Domain of unknown function (DUF4143)
PBKDCIHP_00567 1.9e-72 S Domain of unknown function (DUF4143)
PBKDCIHP_00568 9.1e-144 S Domain of unknown function (DUF4143)
PBKDCIHP_00569 9.9e-109 P Protein of unknown function DUF47
PBKDCIHP_00570 6.4e-170 ugpQ 3.1.4.46 C Domain of unknown function
PBKDCIHP_00571 2.6e-239 ugpB G Bacterial extracellular solute-binding protein
PBKDCIHP_00572 4e-142 ugpE G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00573 3.5e-164 ugpA P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00574 4.5e-145 P Phosphate transporter family
PBKDCIHP_00575 1.3e-190 K helix_turn _helix lactose operon repressor
PBKDCIHP_00576 2e-141 K LysR substrate binding domain
PBKDCIHP_00577 3.8e-101 K LysR substrate binding domain
PBKDCIHP_00578 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PBKDCIHP_00579 1.1e-242 vbsD V MatE
PBKDCIHP_00580 2.3e-122 magIII L endonuclease III
PBKDCIHP_00582 4.8e-109 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PBKDCIHP_00583 6.4e-41 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PBKDCIHP_00584 2.1e-186 S Membrane transport protein
PBKDCIHP_00585 1.6e-47 4.1.1.44 L Cupin 2, conserved barrel domain protein
PBKDCIHP_00587 0.0 M probably involved in cell wall
PBKDCIHP_00588 3.4e-252 3.2.1.14 GH18 S Carbohydrate binding domain
PBKDCIHP_00589 0.0 T Diguanylate cyclase, GGDEF domain
PBKDCIHP_00590 7.1e-136 ybbM V Uncharacterised protein family (UPF0014)
PBKDCIHP_00591 4.2e-127 ybbL V ATPases associated with a variety of cellular activities
PBKDCIHP_00592 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PBKDCIHP_00593 1.1e-92 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PBKDCIHP_00594 2e-241 carA 6.3.5.5 F Belongs to the CarA family
PBKDCIHP_00595 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PBKDCIHP_00596 6.7e-170 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PBKDCIHP_00597 1.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PBKDCIHP_00598 3.7e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
PBKDCIHP_00600 0.0 tetP J Elongation factor G, domain IV
PBKDCIHP_00601 1.9e-126 ypfH S Phospholipase/Carboxylesterase
PBKDCIHP_00602 4e-234 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PBKDCIHP_00603 2.5e-42 XAC3035 O Glutaredoxin
PBKDCIHP_00604 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
PBKDCIHP_00605 7.2e-116 XK27_08050 O prohibitin homologues
PBKDCIHP_00606 5.6e-58 S Domain of unknown function (DUF4143)
PBKDCIHP_00607 2.9e-159 S Patatin-like phospholipase
PBKDCIHP_00608 1.5e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PBKDCIHP_00609 2.7e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PBKDCIHP_00610 3.2e-127 S Vitamin K epoxide reductase
PBKDCIHP_00611 6.5e-170 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
PBKDCIHP_00612 7.2e-33 S Protein of unknown function (DUF3107)
PBKDCIHP_00613 2e-302 mphA S Aminoglycoside phosphotransferase
PBKDCIHP_00614 4e-292 uvrD2 3.6.4.12 L DNA helicase
PBKDCIHP_00615 3.9e-296 S Zincin-like metallopeptidase
PBKDCIHP_00616 1.6e-155 lon T Belongs to the peptidase S16 family
PBKDCIHP_00617 1.6e-73 S Protein of unknown function (DUF3052)
PBKDCIHP_00619 8.8e-210 2.7.11.1 NU Tfp pilus assembly protein FimV
PBKDCIHP_00620 3.2e-220 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PBKDCIHP_00621 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PBKDCIHP_00622 0.0 I acetylesterase activity
PBKDCIHP_00623 4.5e-129 recO L Involved in DNA repair and RecF pathway recombination
PBKDCIHP_00624 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PBKDCIHP_00625 4.5e-135 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00626 7.5e-189 P NMT1/THI5 like
PBKDCIHP_00627 1.8e-223 E Aminotransferase class I and II
PBKDCIHP_00628 4.8e-140 bioM P ATPases associated with a variety of cellular activities
PBKDCIHP_00630 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PBKDCIHP_00631 0.0 S Tetratricopeptide repeat
PBKDCIHP_00632 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PBKDCIHP_00633 1e-204 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PBKDCIHP_00634 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
PBKDCIHP_00635 9.2e-144 S Domain of unknown function (DUF4191)
PBKDCIHP_00636 9.3e-278 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PBKDCIHP_00637 6.9e-102 S Protein of unknown function (DUF3043)
PBKDCIHP_00638 2.1e-260 argE E Peptidase dimerisation domain
PBKDCIHP_00639 6.2e-108 ykoE S ABC-type cobalt transport system, permease component
PBKDCIHP_00640 5.5e-275 ykoD P ATPases associated with a variety of cellular activities
PBKDCIHP_00641 1.2e-158 cbiQ P Cobalt transport protein
PBKDCIHP_00642 6e-160 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PBKDCIHP_00643 7.7e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PBKDCIHP_00644 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
PBKDCIHP_00645 2.6e-91
PBKDCIHP_00646 6.1e-202 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PBKDCIHP_00647 3.7e-213 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PBKDCIHP_00648 1.8e-178 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PBKDCIHP_00649 8.7e-248 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
PBKDCIHP_00650 8.6e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PBKDCIHP_00651 2.3e-82 argR K Regulates arginine biosynthesis genes
PBKDCIHP_00652 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PBKDCIHP_00654 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_00655 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_00656 1.5e-48 L PFAM Integrase catalytic
PBKDCIHP_00657 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_00658 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_00659 1.1e-29 L PFAM Integrase catalytic
PBKDCIHP_00660 8.5e-44 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
PBKDCIHP_00661 2.4e-32 relB L RelB antitoxin
PBKDCIHP_00662 1.2e-280 argH 4.3.2.1 E argininosuccinate lyase
PBKDCIHP_00663 1.2e-28 thiS 2.8.1.10 H ThiS family
PBKDCIHP_00664 1.4e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PBKDCIHP_00665 8.6e-145 moeB 2.7.7.80 H ThiF family
PBKDCIHP_00666 3.1e-71 M1-798 P Rhodanese Homology Domain
PBKDCIHP_00667 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PBKDCIHP_00668 3.9e-139 S Putative ABC-transporter type IV
PBKDCIHP_00669 9.1e-82 S Protein of unknown function (DUF975)
PBKDCIHP_00670 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PBKDCIHP_00671 5.5e-163 L Tetratricopeptide repeat
PBKDCIHP_00672 6e-199 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PBKDCIHP_00674 5.5e-141 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PBKDCIHP_00675 4.7e-96
PBKDCIHP_00676 1.3e-49 trkA P TrkA-N domain
PBKDCIHP_00677 1.5e-41 trkB P Cation transport protein
PBKDCIHP_00678 5.7e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PBKDCIHP_00679 0.0 recN L May be involved in recombinational repair of damaged DNA
PBKDCIHP_00680 4.2e-118 S Haloacid dehalogenase-like hydrolase
PBKDCIHP_00681 2.1e-56 J Acetyltransferase (GNAT) domain
PBKDCIHP_00682 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
PBKDCIHP_00683 1.1e-172 V ATPases associated with a variety of cellular activities
PBKDCIHP_00684 1.7e-120 S ABC-2 family transporter protein
PBKDCIHP_00685 5.1e-109
PBKDCIHP_00686 2.2e-09 S Psort location Cytoplasmic, score
PBKDCIHP_00687 1.9e-283 thrC 4.2.3.1 E Threonine synthase N terminus
PBKDCIHP_00688 7.1e-234 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PBKDCIHP_00689 4.7e-97
PBKDCIHP_00690 3.2e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PBKDCIHP_00691 2.2e-91 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
PBKDCIHP_00692 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_00693 1.4e-123 insK L Integrase core domain
PBKDCIHP_00694 1.9e-23 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
PBKDCIHP_00695 0.0 S Uncharacterised protein family (UPF0182)
PBKDCIHP_00696 2.8e-93 2.3.1.183 M Acetyltransferase (GNAT) domain
PBKDCIHP_00697 1.5e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PBKDCIHP_00698 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PBKDCIHP_00699 5.4e-180 1.1.1.65 C Aldo/keto reductase family
PBKDCIHP_00700 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PBKDCIHP_00701 6.6e-70 divIC D Septum formation initiator
PBKDCIHP_00702 1.3e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
PBKDCIHP_00703 1.3e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PBKDCIHP_00705 2.9e-94
PBKDCIHP_00706 6.7e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
PBKDCIHP_00707 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
PBKDCIHP_00708 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PBKDCIHP_00709 1.1e-146 yplQ S Haemolysin-III related
PBKDCIHP_00710 1.1e-278 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBKDCIHP_00711 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PBKDCIHP_00712 0.0 D FtsK/SpoIIIE family
PBKDCIHP_00713 1.3e-206 K Cell envelope-related transcriptional attenuator domain
PBKDCIHP_00714 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PBKDCIHP_00715 0.0 S Glycosyl transferase, family 2
PBKDCIHP_00716 5.1e-263
PBKDCIHP_00717 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
PBKDCIHP_00718 5.7e-149 cof 5.2.1.8 T Eukaryotic phosphomannomutase
PBKDCIHP_00719 6.5e-122 ctsW S Phosphoribosyl transferase domain
PBKDCIHP_00720 4.4e-197 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBKDCIHP_00721 2.9e-128 T Response regulator receiver domain protein
PBKDCIHP_00722 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PBKDCIHP_00723 2.1e-100 carD K CarD-like/TRCF domain
PBKDCIHP_00724 1.1e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PBKDCIHP_00725 1.4e-123 insK L Integrase core domain
PBKDCIHP_00726 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_00727 9.8e-136 znuB U ABC 3 transport family
PBKDCIHP_00728 3.8e-162 znuC P ATPases associated with a variety of cellular activities
PBKDCIHP_00729 8e-184 P Zinc-uptake complex component A periplasmic
PBKDCIHP_00730 1.5e-163 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PBKDCIHP_00731 3.2e-254 rpsA J Ribosomal protein S1
PBKDCIHP_00732 1.6e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PBKDCIHP_00733 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PBKDCIHP_00734 1.5e-175 terC P Integral membrane protein, TerC family
PBKDCIHP_00735 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
PBKDCIHP_00736 1.1e-109 aspA 3.6.1.13 L NUDIX domain
PBKDCIHP_00738 8.2e-124 pdtaR T Response regulator receiver domain protein
PBKDCIHP_00739 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PBKDCIHP_00740 4.7e-179 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
PBKDCIHP_00741 1.5e-126 3.6.1.13 L NUDIX domain
PBKDCIHP_00742 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PBKDCIHP_00743 4.9e-25 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PBKDCIHP_00744 1.1e-89 K Putative zinc ribbon domain
PBKDCIHP_00745 2.1e-125 S GyrI-like small molecule binding domain
PBKDCIHP_00746 5.6e-21 tag 3.2.2.20 L Methyladenine glycosylase
PBKDCIHP_00748 5.9e-123
PBKDCIHP_00749 1.9e-214 ykiI
PBKDCIHP_00750 1.3e-251 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PBKDCIHP_00751 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PBKDCIHP_00752 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PBKDCIHP_00754 3.2e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PBKDCIHP_00755 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
PBKDCIHP_00756 1.1e-118
PBKDCIHP_00757 1.7e-48
PBKDCIHP_00760 2.1e-125 O AAA domain (Cdc48 subfamily)
PBKDCIHP_00761 1.7e-65
PBKDCIHP_00763 5.3e-38 L Phage integrase, N-terminal SAM-like domain
PBKDCIHP_00764 1.3e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PBKDCIHP_00765 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PBKDCIHP_00766 1.5e-261 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PBKDCIHP_00767 6.5e-66 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PBKDCIHP_00768 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
PBKDCIHP_00771 5.6e-158 S Sucrose-6F-phosphate phosphohydrolase
PBKDCIHP_00772 1.6e-177 metQ P NLPA lipoprotein
PBKDCIHP_00773 3.2e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PBKDCIHP_00774 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00775 4.1e-225 S Peptidase dimerisation domain
PBKDCIHP_00776 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PBKDCIHP_00777 2.6e-38
PBKDCIHP_00778 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PBKDCIHP_00779 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PBKDCIHP_00780 9.8e-120 S Protein of unknown function (DUF3000)
PBKDCIHP_00781 7.6e-252 rnd 3.1.13.5 J 3'-5' exonuclease
PBKDCIHP_00782 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PBKDCIHP_00783 3.3e-245 clcA_2 P Voltage gated chloride channel
PBKDCIHP_00784 2e-59
PBKDCIHP_00785 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PBKDCIHP_00786 7.3e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PBKDCIHP_00787 2.1e-252 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PBKDCIHP_00790 3.3e-241 patB 4.4.1.8 E Aminotransferase, class I II
PBKDCIHP_00791 1.3e-238 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PBKDCIHP_00792 1.4e-167 fmt2 3.2.2.10 S Belongs to the LOG family
PBKDCIHP_00793 1.9e-113 safC S O-methyltransferase
PBKDCIHP_00794 4.2e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
PBKDCIHP_00795 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
PBKDCIHP_00796 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
PBKDCIHP_00797 3.4e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
PBKDCIHP_00798 2.2e-75 yraN L Belongs to the UPF0102 family
PBKDCIHP_00799 1.6e-23 L Transposase and inactivated derivatives IS30 family
PBKDCIHP_00800 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PBKDCIHP_00801 1.7e-251 metY 2.5.1.49 E Aminotransferase class-V
PBKDCIHP_00802 7.3e-164 V ABC transporter, ATP-binding protein
PBKDCIHP_00803 0.0 MV MacB-like periplasmic core domain
PBKDCIHP_00804 3.8e-140 K helix_turn_helix, Lux Regulon
PBKDCIHP_00805 0.0 tcsS2 T Histidine kinase
PBKDCIHP_00806 3.6e-290 pip 3.4.11.5 S alpha/beta hydrolase fold
PBKDCIHP_00807 5.5e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PBKDCIHP_00808 9.6e-155 cjaA ET Bacterial periplasmic substrate-binding proteins
PBKDCIHP_00809 2.6e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
PBKDCIHP_00810 1.2e-118 E Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00811 7.4e-110 papP E Binding-protein-dependent transport system inner membrane component
PBKDCIHP_00812 3.2e-199 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PBKDCIHP_00813 3.7e-235 XK27_00240 K Fic/DOC family
PBKDCIHP_00814 1.8e-60 yccF S Inner membrane component domain
PBKDCIHP_00815 1.3e-159 ksgA 2.1.1.182 J Methyltransferase domain
PBKDCIHP_00816 2.5e-67 S Cupin 2, conserved barrel domain protein
PBKDCIHP_00817 1.5e-52 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PBKDCIHP_00818 1.1e-37 L RelB antitoxin
PBKDCIHP_00819 3.3e-244 S HipA-like C-terminal domain
PBKDCIHP_00820 1.2e-31 K addiction module antidote protein HigA
PBKDCIHP_00821 2.2e-219 G Transmembrane secretion effector
PBKDCIHP_00822 1.2e-118 K Bacterial regulatory proteins, tetR family
PBKDCIHP_00823 2.2e-11
PBKDCIHP_00824 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
PBKDCIHP_00825 1.2e-13 EGP Transmembrane secretion effector
PBKDCIHP_00826 1.7e-290 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PBKDCIHP_00827 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
PBKDCIHP_00828 1.9e-147 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PBKDCIHP_00829 8.7e-176 2.7.1.2 GK ROK family
PBKDCIHP_00830 3.1e-220 GK ROK family
PBKDCIHP_00831 4.1e-158 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PBKDCIHP_00832 4.9e-252 gtr U Sugar (and other) transporter
PBKDCIHP_00833 0.0 P Domain of unknown function (DUF4976)
PBKDCIHP_00834 1.2e-271 aslB C Iron-sulfur cluster-binding domain
PBKDCIHP_00835 3.2e-107 S Sulfite exporter TauE/SafE
PBKDCIHP_00836 2.9e-57 L Helix-turn-helix domain
PBKDCIHP_00837 1.5e-93 S Sulfite exporter TauE/SafE
PBKDCIHP_00838 1.7e-63 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PBKDCIHP_00840 1.6e-244 EGP Major facilitator Superfamily
PBKDCIHP_00841 3e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
PBKDCIHP_00842 1.4e-161 3.1.3.73 G Phosphoglycerate mutase family
PBKDCIHP_00843 1.1e-234 rutG F Permease family
PBKDCIHP_00844 4.6e-304 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
PBKDCIHP_00845 4.6e-249 nplT G Alpha amylase, catalytic domain
PBKDCIHP_00846 3.1e-187 pit P Phosphate transporter family
PBKDCIHP_00847 1e-113 MA20_27875 P Protein of unknown function DUF47
PBKDCIHP_00848 5.6e-110 K helix_turn_helix, Lux Regulon
PBKDCIHP_00849 9.7e-226 T Histidine kinase
PBKDCIHP_00850 1.8e-10 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PBKDCIHP_00851 2.9e-187 V ATPases associated with a variety of cellular activities
PBKDCIHP_00852 3.7e-224 V ABC-2 family transporter protein
PBKDCIHP_00853 4.2e-251 V ABC-2 family transporter protein
PBKDCIHP_00854 4.5e-285 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PBKDCIHP_00855 3.2e-112 E GDSL-like Lipase/Acylhydrolase family
PBKDCIHP_00856 7e-191
PBKDCIHP_00857 1.9e-54 3.4.13.21 E Peptidase family S51
PBKDCIHP_00858 2.4e-110 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
PBKDCIHP_00859 7.6e-161 M pfam nlp p60
PBKDCIHP_00860 3.3e-152 I Serine aminopeptidase, S33
PBKDCIHP_00861 1.4e-30 yozG K Cro/C1-type HTH DNA-binding domain
PBKDCIHP_00862 1.7e-53 S Protein of unknown function (DUF2975)
PBKDCIHP_00863 1.3e-241 pbuX F Permease family
PBKDCIHP_00864 1.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PBKDCIHP_00865 0.0 pcrA 3.6.4.12 L DNA helicase
PBKDCIHP_00866 3.4e-62 S Domain of unknown function (DUF4418)
PBKDCIHP_00867 5.1e-218 V FtsX-like permease family
PBKDCIHP_00868 9.7e-161 lolD V ABC transporter
PBKDCIHP_00869 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PBKDCIHP_00870 1.7e-153 S Peptidase C26
PBKDCIHP_00871 2.5e-91 3.5.4.5 F cytidine deaminase activity
PBKDCIHP_00872 1.8e-46 sdpI S SdpI/YhfL protein family
PBKDCIHP_00873 1.2e-111 E Transglutaminase-like superfamily
PBKDCIHP_00874 7.1e-67 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PBKDCIHP_00875 1.2e-48 relB L RelB antitoxin
PBKDCIHP_00876 1.9e-129 pgm3 G Phosphoglycerate mutase family
PBKDCIHP_00877 2.4e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
PBKDCIHP_00878 1.6e-35
PBKDCIHP_00879 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PBKDCIHP_00880 2.7e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PBKDCIHP_00881 5.4e-196 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PBKDCIHP_00882 3.1e-70 3.4.23.43 S Type IV leader peptidase family
PBKDCIHP_00883 7.3e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PBKDCIHP_00884 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PBKDCIHP_00885 3.1e-80 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
PBKDCIHP_00886 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PBKDCIHP_00887 0.0 S L,D-transpeptidase catalytic domain
PBKDCIHP_00888 1.5e-291 sufB O FeS assembly protein SufB
PBKDCIHP_00889 1.1e-236 sufD O FeS assembly protein SufD
PBKDCIHP_00890 7e-144 sufC O FeS assembly ATPase SufC
PBKDCIHP_00891 9.4e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PBKDCIHP_00892 8.1e-102 iscU C SUF system FeS assembly protein, NifU family
PBKDCIHP_00893 3.2e-109 yitW S Iron-sulfur cluster assembly protein
PBKDCIHP_00894 6.2e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PBKDCIHP_00895 9.6e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
PBKDCIHP_00897 3e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PBKDCIHP_00898 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
PBKDCIHP_00899 2.5e-217 phoH T PhoH-like protein
PBKDCIHP_00900 4.7e-102 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PBKDCIHP_00901 4.3e-248 corC S CBS domain
PBKDCIHP_00902 8.1e-185 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PBKDCIHP_00903 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PBKDCIHP_00904 4.8e-205 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
PBKDCIHP_00905 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
PBKDCIHP_00906 5.1e-233 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PBKDCIHP_00907 4.9e-235 yhjX EGP Major facilitator Superfamily
PBKDCIHP_00908 1.7e-103 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PBKDCIHP_00909 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
PBKDCIHP_00910 8.8e-143 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
PBKDCIHP_00911 8.8e-139 S UPF0126 domain
PBKDCIHP_00912 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
PBKDCIHP_00913 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PBKDCIHP_00914 7.4e-255 hemN H Involved in the biosynthesis of porphyrin-containing compound
PBKDCIHP_00916 1.2e-191 K helix_turn _helix lactose operon repressor
PBKDCIHP_00917 6.9e-64 K helix_turn _helix lactose operon repressor
PBKDCIHP_00918 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
PBKDCIHP_00919 1.4e-305 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PBKDCIHP_00920 5.4e-44
PBKDCIHP_00921 0.0 E ABC transporter, substrate-binding protein, family 5
PBKDCIHP_00922 0.0 S Glycosyl hydrolases related to GH101 family, GH129
PBKDCIHP_00923 6.6e-81
PBKDCIHP_00924 1.3e-243 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
PBKDCIHP_00925 8.4e-159 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
PBKDCIHP_00926 5.8e-160 S Sucrose-6F-phosphate phosphohydrolase
PBKDCIHP_00928 1.8e-34 G transmembrane transporter activity
PBKDCIHP_00929 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_00930 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_00931 4.2e-100 L Transposase, Mutator family
PBKDCIHP_00932 2.3e-93 bcp 1.11.1.15 O Redoxin
PBKDCIHP_00933 4.1e-142
PBKDCIHP_00934 2.6e-42 L Transposase, Mutator family
PBKDCIHP_00935 1.5e-177 I alpha/beta hydrolase fold
PBKDCIHP_00936 5e-90 S Appr-1'-p processing enzyme
PBKDCIHP_00937 1.8e-115 S phosphoesterase or phosphohydrolase
PBKDCIHP_00938 9.9e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PBKDCIHP_00940 1.6e-131 S Phospholipase/Carboxylesterase
PBKDCIHP_00941 2.7e-202 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PBKDCIHP_00942 1.3e-99 sixA 3.6.1.55 T Phosphoglycerate mutase family
PBKDCIHP_00944 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PBKDCIHP_00945 2.8e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
PBKDCIHP_00946 1.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PBKDCIHP_00947 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PBKDCIHP_00948 3.2e-178 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PBKDCIHP_00949 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PBKDCIHP_00950 1.7e-290 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PBKDCIHP_00951 8e-174 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
PBKDCIHP_00952 6.3e-159 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PBKDCIHP_00953 3.3e-183 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PBKDCIHP_00954 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PBKDCIHP_00955 4.6e-28
PBKDCIHP_00956 2.8e-218 MA20_36090 S Psort location Cytoplasmic, score 8.87
PBKDCIHP_00957 1.4e-123 insK L Integrase core domain
PBKDCIHP_00958 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_00959 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
PBKDCIHP_00960 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PBKDCIHP_00961 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PBKDCIHP_00962 1.1e-300 ybiT S ABC transporter
PBKDCIHP_00963 5.2e-130 S Enoyl-(Acyl carrier protein) reductase
PBKDCIHP_00964 5.2e-56 P ABC transporter
PBKDCIHP_00965 8.3e-59 P ABC transporter
PBKDCIHP_00966 5.1e-15 XK26_04485 P Cobalt transport protein
PBKDCIHP_00967 3.2e-233 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
PBKDCIHP_00968 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PBKDCIHP_00969 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PBKDCIHP_00970 5.6e-191 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
PBKDCIHP_00971 2.6e-180 rapZ S Displays ATPase and GTPase activities
PBKDCIHP_00972 3.5e-169 whiA K May be required for sporulation
PBKDCIHP_00973 7.9e-219 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
PBKDCIHP_00974 3.5e-146 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PBKDCIHP_00975 2.5e-34 secG U Preprotein translocase SecG subunit
PBKDCIHP_00976 1.2e-174 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PBKDCIHP_00977 2.9e-159 S Sucrose-6F-phosphate phosphohydrolase
PBKDCIHP_00978 3.6e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
PBKDCIHP_00979 2.9e-189
PBKDCIHP_00980 1.4e-240 brnQ U Component of the transport system for branched-chain amino acids
PBKDCIHP_00981 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PBKDCIHP_00982 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
PBKDCIHP_00983 3.7e-191 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PBKDCIHP_00984 2e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PBKDCIHP_00985 9.6e-157 G Fructosamine kinase
PBKDCIHP_00986 4.1e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PBKDCIHP_00987 1.2e-133 S PAC2 family
PBKDCIHP_00993 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PBKDCIHP_00994 7.7e-111 hit 2.7.7.53 FG HIT domain
PBKDCIHP_00995 2e-111 yebC K transcriptional regulatory protein
PBKDCIHP_00996 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PBKDCIHP_00997 3.2e-107 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PBKDCIHP_00998 9.4e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PBKDCIHP_00999 1.2e-52 yajC U Preprotein translocase subunit
PBKDCIHP_01000 2.7e-100 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PBKDCIHP_01001 6.9e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PBKDCIHP_01002 1.4e-164 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PBKDCIHP_01003 1.2e-228
PBKDCIHP_01004 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PBKDCIHP_01005 4.8e-32
PBKDCIHP_01006 2.9e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PBKDCIHP_01007 4.5e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PBKDCIHP_01008 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
PBKDCIHP_01010 2.5e-163 supH S Sucrose-6F-phosphate phosphohydrolase
PBKDCIHP_01011 9.3e-294 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
PBKDCIHP_01012 0.0 pafB K WYL domain
PBKDCIHP_01013 6.8e-53
PBKDCIHP_01014 0.0 helY L DEAD DEAH box helicase
PBKDCIHP_01015 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PBKDCIHP_01016 2.8e-139 pgp 3.1.3.18 S HAD-hyrolase-like
PBKDCIHP_01017 6.9e-36
PBKDCIHP_01018 4.9e-64
PBKDCIHP_01019 2.6e-112 K helix_turn_helix, mercury resistance
PBKDCIHP_01020 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
PBKDCIHP_01021 5.9e-141 S Bacterial protein of unknown function (DUF881)
PBKDCIHP_01022 3.9e-35 sbp S Protein of unknown function (DUF1290)
PBKDCIHP_01023 2.9e-171 S Bacterial protein of unknown function (DUF881)
PBKDCIHP_01024 1.2e-106 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PBKDCIHP_01025 7.9e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
PBKDCIHP_01026 1e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
PBKDCIHP_01027 1.8e-111 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
PBKDCIHP_01028 1.7e-184 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PBKDCIHP_01029 3.2e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PBKDCIHP_01030 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PBKDCIHP_01031 1.2e-131 S SOS response associated peptidase (SRAP)
PBKDCIHP_01032 1.4e-156 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PBKDCIHP_01033 1.1e-259 mmuP E amino acid
PBKDCIHP_01034 1.9e-50 EGP Major facilitator Superfamily
PBKDCIHP_01035 9.3e-189 V VanZ like family
PBKDCIHP_01036 6e-69 cefD 5.1.1.17 E Aminotransferase, class V
PBKDCIHP_01037 3.3e-100 S Acetyltransferase (GNAT) domain
PBKDCIHP_01038 1.5e-50
PBKDCIHP_01039 5.2e-121
PBKDCIHP_01042 2e-35 2.7.13.3 T Histidine kinase
PBKDCIHP_01043 1.1e-193 2.7.13.3 T Histidine kinase
PBKDCIHP_01044 5.3e-127 K helix_turn_helix, Lux Regulon
PBKDCIHP_01045 3e-95
PBKDCIHP_01046 2.8e-144 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBKDCIHP_01047 1.4e-124 lolD Q ATPases associated with a variety of cellular activities
PBKDCIHP_01048 1.5e-177 V MacB-like periplasmic core domain
PBKDCIHP_01049 3.2e-40 relB L RelB antitoxin
PBKDCIHP_01050 3.8e-50 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PBKDCIHP_01051 8.4e-26 2.7.13.3 T Histidine kinase
PBKDCIHP_01052 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_01053 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_01054 1.5e-74 rpoE4 K Sigma-70 region 2
PBKDCIHP_01055 7.5e-19 S Psort location CytoplasmicMembrane, score
PBKDCIHP_01056 2.1e-106
PBKDCIHP_01057 8.3e-137
PBKDCIHP_01058 4.4e-163 yfiL V ATPases associated with a variety of cellular activities
PBKDCIHP_01059 2e-70
PBKDCIHP_01060 9.1e-62
PBKDCIHP_01061 5.3e-148 S EamA-like transporter family
PBKDCIHP_01062 1.4e-102
PBKDCIHP_01063 2.5e-127
PBKDCIHP_01064 2.2e-122 V ATPases associated with a variety of cellular activities
PBKDCIHP_01065 8.8e-16 fic D Fic/DOC family
PBKDCIHP_01066 4.1e-23
PBKDCIHP_01067 3.5e-109
PBKDCIHP_01068 1.3e-45 K sequence-specific DNA binding
PBKDCIHP_01069 8.3e-34 hipA 2.7.11.1 S kinase activity
PBKDCIHP_01070 4.4e-42 2.6.1.76 EGP Major Facilitator Superfamily
PBKDCIHP_01071 6.3e-20 G Major facilitator Superfamily
PBKDCIHP_01072 1.3e-293 mmuP E amino acid
PBKDCIHP_01074 1e-62 yeaO K Protein of unknown function, DUF488
PBKDCIHP_01075 3.8e-75
PBKDCIHP_01076 1.9e-173 3.6.4.12
PBKDCIHP_01077 4e-65 yijF S Domain of unknown function (DUF1287)
PBKDCIHP_01078 3.2e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PBKDCIHP_01079 5.3e-71 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PBKDCIHP_01080 1.4e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PBKDCIHP_01081 5.5e-77 3.5.1.124 S DJ-1/PfpI family
PBKDCIHP_01082 1.3e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PBKDCIHP_01083 3.7e-174 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
PBKDCIHP_01084 1.5e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PBKDCIHP_01085 2.8e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PBKDCIHP_01086 1.4e-145 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PBKDCIHP_01087 5.8e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
PBKDCIHP_01088 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PBKDCIHP_01089 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
PBKDCIHP_01090 3.3e-91
PBKDCIHP_01091 1.5e-208 guaB 1.1.1.205 F IMP dehydrogenase family protein
PBKDCIHP_01092 7.9e-243 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
PBKDCIHP_01093 3e-256 G ABC transporter substrate-binding protein
PBKDCIHP_01094 2.4e-36 M Peptidase family M23
PBKDCIHP_01095 4.1e-175 xerH L Phage integrase family
PBKDCIHP_01097 5.4e-130 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
PBKDCIHP_01098 1.6e-87 K Psort location Cytoplasmic, score
PBKDCIHP_01099 2.7e-102 S Fic/DOC family
PBKDCIHP_01102 6.9e-57 ard S Antirestriction protein (ArdA)
PBKDCIHP_01103 5.1e-08
PBKDCIHP_01104 2.5e-83 M G5 domain protein
PBKDCIHP_01105 2e-68
PBKDCIHP_01108 1.7e-243 topB 5.99.1.2 L DNA topoisomerase
PBKDCIHP_01111 2.3e-14 K Bacterial mobilisation protein (MobC)
PBKDCIHP_01112 1.1e-35 S Pfam:CtkA_N
PBKDCIHP_01114 2.4e-69 ecoRIIR 3.1.21.4 L EcoRII C terminal
PBKDCIHP_01115 4e-112 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
PBKDCIHP_01116 1.9e-144 S Fic/DOC family
PBKDCIHP_01117 1.1e-138 L PFAM Relaxase mobilization nuclease family protein
PBKDCIHP_01118 2.2e-86 2.7.11.1 S HipA-like C-terminal domain
PBKDCIHP_01120 6.8e-39
PBKDCIHP_01121 9.4e-50 S Domain of unknown function (DUF4913)
PBKDCIHP_01122 3.3e-229 U TraM recognition site of TraD and TraG
PBKDCIHP_01123 1.5e-22
PBKDCIHP_01127 1.3e-200 traD S COG0433 Predicted ATPase
PBKDCIHP_01128 2.6e-187
PBKDCIHP_01129 7.5e-142
PBKDCIHP_01130 1.3e-29
PBKDCIHP_01131 1.5e-32
PBKDCIHP_01132 5.5e-10
PBKDCIHP_01133 4e-20
PBKDCIHP_01134 1.3e-86 M Spy0128-like isopeptide containing domain
PBKDCIHP_01135 1.3e-128 hsdM 2.1.1.72 V HsdM N-terminal domain
PBKDCIHP_01136 4e-90 3.1.21.3 V Type I restriction modification DNA specificity domain
PBKDCIHP_01137 3e-228 2.7.7.7 L Transposase and inactivated derivatives
PBKDCIHP_01138 4.4e-111
PBKDCIHP_01139 6.9e-161 ksgA 2.1.1.182, 2.1.1.184 J Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
PBKDCIHP_01140 3e-228 2.7.7.7 L Transposase and inactivated derivatives
PBKDCIHP_01141 4.4e-111
PBKDCIHP_01142 6.9e-161 ksgA 2.1.1.182, 2.1.1.184 J Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
PBKDCIHP_01143 3e-228 2.7.7.7 L Transposase and inactivated derivatives
PBKDCIHP_01144 4.4e-111
PBKDCIHP_01145 6.9e-161 ksgA 2.1.1.182, 2.1.1.184 J Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
PBKDCIHP_01146 3e-228 2.7.7.7 L Transposase and inactivated derivatives
PBKDCIHP_01147 2.1e-65 tnpA1 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PBKDCIHP_01148 7.7e-76 U Spy0128-like isopeptide containing domain
PBKDCIHP_01149 0.0 XK27_00515 D Cell surface antigen C-terminus
PBKDCIHP_01150 1e-38
PBKDCIHP_01151 7.6e-31
PBKDCIHP_01152 9e-50
PBKDCIHP_01153 4.5e-22
PBKDCIHP_01155 1e-30 parA D VirC1 protein
PBKDCIHP_01156 5.8e-16 S Transcription factor WhiB
PBKDCIHP_01157 3.7e-15 S Helix-turn-helix domain
PBKDCIHP_01163 2.7e-17
PBKDCIHP_01166 3.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PBKDCIHP_01167 1e-105 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
PBKDCIHP_01168 1e-159 yeaZ 2.3.1.234 O Glycoprotease family
PBKDCIHP_01169 1.5e-87 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
PBKDCIHP_01170 9.9e-172 holA 2.7.7.7 L DNA polymerase III delta subunit
PBKDCIHP_01171 2.1e-310 comE S Competence protein
PBKDCIHP_01172 1.6e-44 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
PBKDCIHP_01173 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PBKDCIHP_01174 2.7e-160 ET Bacterial periplasmic substrate-binding proteins
PBKDCIHP_01175 5.3e-170 corA P CorA-like Mg2+ transporter protein
PBKDCIHP_01176 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PBKDCIHP_01177 1.6e-233 L ribosomal rna small subunit methyltransferase
PBKDCIHP_01178 4.1e-71 pdxH S Pfam:Pyridox_oxidase
PBKDCIHP_01179 1.8e-170 EG EamA-like transporter family
PBKDCIHP_01180 2.1e-131 C Putative TM nitroreductase
PBKDCIHP_01181 2.4e-36
PBKDCIHP_01182 3.9e-256 S Metal-independent alpha-mannosidase (GH125)
PBKDCIHP_01183 1.6e-238 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PBKDCIHP_01184 5.6e-203 K helix_turn _helix lactose operon repressor
PBKDCIHP_01185 1.9e-72 G Glycosyl hydrolase family 85
PBKDCIHP_01186 3.1e-134 G Glycosyl hydrolase family 85
PBKDCIHP_01187 1.1e-190 G Glycosyl hydrolase family 85
PBKDCIHP_01188 7.4e-15 G Glycosyl hydrolase family 85
PBKDCIHP_01189 1e-176 endOF2 3.2.1.14, 3.2.1.52, 3.2.1.96 GH18,GH20 G Glycosyl hydrolase, family 20, catalytic domain
PBKDCIHP_01190 0.0 bglX-2 3.2.1.21 GH3 G Glycosyl hydrolase family 3 C-terminal domain
PBKDCIHP_01191 1.1e-258 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PBKDCIHP_01192 3e-156 lacG G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01193 1.2e-169 G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01194 1.4e-245 srrA1 G Bacterial extracellular solute-binding protein
PBKDCIHP_01195 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
PBKDCIHP_01196 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
PBKDCIHP_01197 2.2e-87 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PBKDCIHP_01198 3.5e-50 S Appr-1'-p processing enzyme
PBKDCIHP_01199 6e-40 L Psort location Cytoplasmic, score 8.87
PBKDCIHP_01200 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_01201 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_01202 2.4e-57 L Integrase core domain
PBKDCIHP_01203 1e-263 EGP Major Facilitator Superfamily
PBKDCIHP_01205 2.8e-114 K WHG domain
PBKDCIHP_01206 2.5e-110 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
PBKDCIHP_01208 1.4e-158 S Fic/DOC family
PBKDCIHP_01209 4.5e-252 S HipA-like C-terminal domain
PBKDCIHP_01211 2.3e-74
PBKDCIHP_01212 9.9e-263 L Phage integrase family
PBKDCIHP_01213 2.2e-142 fic D Fic/DOC family
PBKDCIHP_01214 1.3e-25
PBKDCIHP_01215 6.2e-57
PBKDCIHP_01216 1.8e-55
PBKDCIHP_01217 2e-72
PBKDCIHP_01218 1.6e-231 topB 5.99.1.2 L DNA topoisomerase
PBKDCIHP_01219 3.8e-145 topB 5.99.1.2 L DNA topoisomerase
PBKDCIHP_01220 8.7e-48
PBKDCIHP_01221 1.5e-33
PBKDCIHP_01223 2.1e-44 S Domain of unknown function (DUF4160)
PBKDCIHP_01224 2.5e-42 K Protein of unknown function (DUF2442)
PBKDCIHP_01225 5.8e-43 S Bacterial mobilisation protein (MobC)
PBKDCIHP_01226 5.8e-249 ltrBE1 U Relaxase/Mobilisation nuclease domain
PBKDCIHP_01227 6.5e-161 S Protein of unknown function (DUF3801)
PBKDCIHP_01228 4.4e-288
PBKDCIHP_01230 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PBKDCIHP_01231 2.5e-36
PBKDCIHP_01232 9e-34
PBKDCIHP_01233 0.0 U Type IV secretory system Conjugative DNA transfer
PBKDCIHP_01234 1.8e-137
PBKDCIHP_01235 1.1e-95
PBKDCIHP_01236 6.9e-261 isp2 3.2.1.96 M CHAP domain
PBKDCIHP_01237 0.0 trsE U type IV secretory pathway VirB4
PBKDCIHP_01238 3e-62 S PrgI family protein
PBKDCIHP_01239 6.9e-145
PBKDCIHP_01240 4.8e-149 D Cell surface antigen C-terminus
PBKDCIHP_01241 2.2e-210 O ATPase family associated with various cellular activities (AAA)
PBKDCIHP_01242 0.0 O Subtilase family
PBKDCIHP_01243 3.9e-38 D Cell surface antigen C-terminus
PBKDCIHP_01245 9.4e-256 U Spy0128-like isopeptide containing domain
PBKDCIHP_01247 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_01248 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_01249 0.0 XK27_00515 D Cell surface antigen C-terminus
PBKDCIHP_01250 1.9e-38
PBKDCIHP_01251 7.6e-16 S Transcription factor WhiB
PBKDCIHP_01252 1.7e-23
PBKDCIHP_01253 1.6e-115 parA D AAA domain
PBKDCIHP_01254 1.1e-89 S Transcription factor WhiB
PBKDCIHP_01255 9.6e-42
PBKDCIHP_01256 1.7e-194 S Helix-turn-helix domain
PBKDCIHP_01257 7.2e-16
PBKDCIHP_01258 6.1e-25
PBKDCIHP_01259 2.3e-117
PBKDCIHP_01260 1.1e-62
PBKDCIHP_01261 5.1e-07
PBKDCIHP_01262 3.1e-116 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PBKDCIHP_01263 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PBKDCIHP_01264 1.7e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PBKDCIHP_01265 1.4e-47 S Domain of unknown function (DUF4193)
PBKDCIHP_01266 1.1e-150 S Protein of unknown function (DUF3071)
PBKDCIHP_01267 7.7e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
PBKDCIHP_01268 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PBKDCIHP_01269 1.9e-09 E GDSL-like Lipase/Acylhydrolase
PBKDCIHP_01270 3e-110 G Bacterial extracellular solute-binding protein
PBKDCIHP_01271 4.6e-43 K AraC-like ligand binding domain
PBKDCIHP_01272 1.8e-43 K Psort location Cytoplasmic, score
PBKDCIHP_01273 1.2e-48 K Psort location Cytoplasmic, score
PBKDCIHP_01274 0.0 lhr L DEAD DEAH box helicase
PBKDCIHP_01275 5.8e-172 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PBKDCIHP_01276 4.5e-222 G Major Facilitator Superfamily
PBKDCIHP_01277 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PBKDCIHP_01278 8.2e-191 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PBKDCIHP_01279 1.8e-113
PBKDCIHP_01280 1.4e-195 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
PBKDCIHP_01281 0.0 pknL 2.7.11.1 KLT PASTA
PBKDCIHP_01282 4e-130 plsC2 2.3.1.51 I Phosphate acyltransferases
PBKDCIHP_01283 7.5e-113
PBKDCIHP_01284 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_01285 1.4e-123 insK L Integrase core domain
PBKDCIHP_01286 2.4e-192 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PBKDCIHP_01287 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PBKDCIHP_01288 2.4e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PBKDCIHP_01289 1.8e-102 recX S Modulates RecA activity
PBKDCIHP_01290 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PBKDCIHP_01291 7e-39 S Protein of unknown function (DUF3046)
PBKDCIHP_01292 2.6e-78 K Helix-turn-helix XRE-family like proteins
PBKDCIHP_01293 3.4e-92 cinA 3.5.1.42 S Belongs to the CinA family
PBKDCIHP_01294 4.7e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PBKDCIHP_01295 0.0 ftsK D FtsK SpoIIIE family protein
PBKDCIHP_01296 1.8e-149 fic D Fic/DOC family
PBKDCIHP_01297 1.1e-181 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PBKDCIHP_01298 5.8e-277 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PBKDCIHP_01299 1.7e-148 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
PBKDCIHP_01300 2.7e-166 ydeD EG EamA-like transporter family
PBKDCIHP_01301 6.9e-134 ybhL S Belongs to the BI1 family
PBKDCIHP_01302 4.9e-82 K helix_turn_helix, Lux Regulon
PBKDCIHP_01303 1.3e-119 E Psort location Cytoplasmic, score 8.87
PBKDCIHP_01304 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PBKDCIHP_01305 0.0 ctpE P E1-E2 ATPase
PBKDCIHP_01306 1.1e-96
PBKDCIHP_01307 7.6e-241 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PBKDCIHP_01308 5e-134 S Protein of unknown function (DUF3159)
PBKDCIHP_01309 1.5e-155 S Protein of unknown function (DUF3710)
PBKDCIHP_01310 3.3e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
PBKDCIHP_01311 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
PBKDCIHP_01312 1.1e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
PBKDCIHP_01313 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01314 0.0 E ABC transporter, substrate-binding protein, family 5
PBKDCIHP_01315 7.2e-189 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PBKDCIHP_01316 6.4e-148 V ABC transporter, ATP-binding protein
PBKDCIHP_01317 0.0 MV MacB-like periplasmic core domain
PBKDCIHP_01318 4.5e-42
PBKDCIHP_01319 5.5e-189 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
PBKDCIHP_01320 6.5e-187 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
PBKDCIHP_01321 7.7e-78
PBKDCIHP_01322 0.0 typA T Elongation factor G C-terminus
PBKDCIHP_01323 7e-107 K Virulence activator alpha C-term
PBKDCIHP_01324 1.4e-136 V ATPases associated with a variety of cellular activities
PBKDCIHP_01325 0.0 V FtsX-like permease family
PBKDCIHP_01326 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_01327 1.4e-123 insK L Integrase core domain
PBKDCIHP_01328 4.5e-19 naiP U Sugar (and other) transporter
PBKDCIHP_01329 2.1e-238 iscS1 2.8.1.7 E Aminotransferase class-V
PBKDCIHP_01330 3.8e-162 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
PBKDCIHP_01331 3.9e-298 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
PBKDCIHP_01332 1.8e-250 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PBKDCIHP_01333 3.4e-160 nrtR 3.6.1.55 F NUDIX hydrolase
PBKDCIHP_01334 5.9e-115 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PBKDCIHP_01335 3.2e-150 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PBKDCIHP_01336 3.8e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PBKDCIHP_01337 1.9e-159 xerD D recombinase XerD
PBKDCIHP_01338 1.4e-193 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PBKDCIHP_01339 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PBKDCIHP_01340 6.2e-25 rpmI J Ribosomal protein L35
PBKDCIHP_01341 1.7e-113 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PBKDCIHP_01342 7.2e-135 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
PBKDCIHP_01343 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PBKDCIHP_01344 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PBKDCIHP_01345 3.7e-182 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PBKDCIHP_01346 8.5e-192 galM 5.1.3.3 G Aldose 1-epimerase
PBKDCIHP_01347 1.1e-188 galM 5.1.3.3 G Aldose 1-epimerase
PBKDCIHP_01348 3.3e-52
PBKDCIHP_01349 1.8e-136 sigH K Belongs to the sigma-70 factor family. ECF subfamily
PBKDCIHP_01350 6.6e-287 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PBKDCIHP_01351 1.6e-193 V Acetyltransferase (GNAT) domain
PBKDCIHP_01352 1.3e-20 V Acetyltransferase (GNAT) domain
PBKDCIHP_01353 2.3e-48 V Acetyltransferase (GNAT) domain
PBKDCIHP_01354 0.0 smc D Required for chromosome condensation and partitioning
PBKDCIHP_01355 2.3e-303 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
PBKDCIHP_01356 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
PBKDCIHP_01357 6.6e-98 3.6.1.55 F NUDIX domain
PBKDCIHP_01358 1.9e-247 nagA 3.5.1.25 G Amidohydrolase family
PBKDCIHP_01359 6.2e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PBKDCIHP_01360 9e-209 GK ROK family
PBKDCIHP_01361 2.2e-165 2.7.1.2 GK ROK family
PBKDCIHP_01362 6.1e-227 GK ROK family
PBKDCIHP_01363 4.7e-168 2.7.1.4 G pfkB family carbohydrate kinase
PBKDCIHP_01364 2e-98 G Major Facilitator Superfamily
PBKDCIHP_01365 7.9e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PBKDCIHP_01366 7.7e-14
PBKDCIHP_01367 7.3e-173 ftsQ 6.3.2.4 D Cell division protein FtsQ
PBKDCIHP_01368 6.2e-285 murC 6.3.2.8 M Belongs to the MurCDEF family
PBKDCIHP_01369 5.9e-219 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PBKDCIHP_01370 9.7e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
PBKDCIHP_01371 4.8e-271 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PBKDCIHP_01372 1.2e-205 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PBKDCIHP_01373 3e-241 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PBKDCIHP_01374 2e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PBKDCIHP_01375 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
PBKDCIHP_01376 4e-67 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PBKDCIHP_01377 5.7e-189 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PBKDCIHP_01378 1.3e-93 mraZ K Belongs to the MraZ family
PBKDCIHP_01379 0.0 L DNA helicase
PBKDCIHP_01380 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PBKDCIHP_01381 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PBKDCIHP_01382 3e-47 M Lysin motif
PBKDCIHP_01383 6.9e-130 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PBKDCIHP_01384 7.7e-161 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PBKDCIHP_01385 1.7e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
PBKDCIHP_01386 1.2e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PBKDCIHP_01387 6.4e-122 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
PBKDCIHP_01388 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
PBKDCIHP_01389 4.3e-217 EGP Major facilitator Superfamily
PBKDCIHP_01390 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
PBKDCIHP_01391 8.1e-279 S Uncharacterized protein conserved in bacteria (DUF2252)
PBKDCIHP_01392 1.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
PBKDCIHP_01393 9.1e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PBKDCIHP_01394 5e-99
PBKDCIHP_01395 4.6e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
PBKDCIHP_01396 1.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PBKDCIHP_01397 1.9e-253 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PBKDCIHP_01398 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
PBKDCIHP_01399 7.7e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
PBKDCIHP_01400 0.0 2.4.1.230, 3.2.1.51 GH65,GH95 G Glycosyl hydrolase family 65, N-terminal domain
PBKDCIHP_01401 1.3e-165 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PBKDCIHP_01402 1.3e-151 S Amidohydrolase
PBKDCIHP_01403 2.2e-145 IQ KR domain
PBKDCIHP_01404 2.3e-166 4.2.1.68 M Enolase C-terminal domain-like
PBKDCIHP_01405 9.2e-10
PBKDCIHP_01406 0.0 4.2.1.53 S MCRA family
PBKDCIHP_01407 6.7e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
PBKDCIHP_01408 4.4e-39 yneG S Domain of unknown function (DUF4186)
PBKDCIHP_01409 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
PBKDCIHP_01410 1.7e-201 K WYL domain
PBKDCIHP_01411 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PBKDCIHP_01412 5.4e-90 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PBKDCIHP_01413 5.2e-22 tccB2 V DivIVA protein
PBKDCIHP_01414 4.9e-45 yggT S YGGT family
PBKDCIHP_01415 5.9e-69 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PBKDCIHP_01416 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PBKDCIHP_01417 5.7e-249 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PBKDCIHP_01418 6.7e-297 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
PBKDCIHP_01419 8.8e-157 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PBKDCIHP_01420 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PBKDCIHP_01421 1.7e-229 O AAA domain (Cdc48 subfamily)
PBKDCIHP_01422 4.6e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PBKDCIHP_01423 9.5e-62 S Thiamine-binding protein
PBKDCIHP_01424 7.1e-248 ydjK G Sugar (and other) transporter
PBKDCIHP_01425 2.5e-216 2.7.13.3 T Histidine kinase
PBKDCIHP_01426 5.1e-122 K helix_turn_helix, Lux Regulon
PBKDCIHP_01427 3.8e-190
PBKDCIHP_01428 1e-257 O SERine Proteinase INhibitors
PBKDCIHP_01429 1.8e-195 K helix_turn _helix lactose operon repressor
PBKDCIHP_01430 6.2e-241 lacY P LacY proton/sugar symporter
PBKDCIHP_01431 3e-303 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
PBKDCIHP_01432 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
PBKDCIHP_01433 2.5e-149 C Putative TM nitroreductase
PBKDCIHP_01434 6.4e-198 S Glycosyltransferase, group 2 family protein
PBKDCIHP_01435 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PBKDCIHP_01436 0.0 ecfA GP ABC transporter, ATP-binding protein
PBKDCIHP_01437 3.1e-47 yhbY J CRS1_YhbY
PBKDCIHP_01438 1.4e-123 insK L Integrase core domain
PBKDCIHP_01439 1.2e-30 L Helix-turn-helix domain
PBKDCIHP_01440 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_01441 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_01442 3.2e-29 L Helix-turn-helix domain
PBKDCIHP_01443 1.4e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PBKDCIHP_01444 1.9e-55
PBKDCIHP_01445 6.9e-189 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PBKDCIHP_01446 1.2e-253 EGP Major facilitator Superfamily
PBKDCIHP_01447 8.7e-33 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PBKDCIHP_01448 5.3e-11 KT Transcriptional regulatory protein, C terminal
PBKDCIHP_01449 8.9e-251 rarA L Recombination factor protein RarA
PBKDCIHP_01450 0.0 helY L DEAD DEAH box helicase
PBKDCIHP_01451 4e-198 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
PBKDCIHP_01453 6.3e-287 ydfD EK Alanine-glyoxylate amino-transferase
PBKDCIHP_01454 6.6e-111 argO S LysE type translocator
PBKDCIHP_01455 1e-287 phoN I PAP2 superfamily
PBKDCIHP_01456 1e-193 gluD E Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01457 1.2e-110 gluC E Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01458 3.8e-145 gluB ET Belongs to the bacterial solute-binding protein 3 family
PBKDCIHP_01459 1.5e-152 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
PBKDCIHP_01460 6.1e-102 S Aminoacyl-tRNA editing domain
PBKDCIHP_01461 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PBKDCIHP_01462 7.7e-261 hisS 6.1.1.21 J Histidyl-tRNA synthetase
PBKDCIHP_01463 3.7e-223 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
PBKDCIHP_01464 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
PBKDCIHP_01465 9.6e-59 lipA I Hydrolase, alpha beta domain protein
PBKDCIHP_01466 3e-132 xylE U Sugar (and other) transporter
PBKDCIHP_01467 3e-26 K helix_turn_helix, arabinose operon control protein
PBKDCIHP_01468 0.0 clpC O ATPase family associated with various cellular activities (AAA)
PBKDCIHP_01469 1.4e-178 uspA T Belongs to the universal stress protein A family
PBKDCIHP_01470 3.7e-180 S Protein of unknown function (DUF3027)
PBKDCIHP_01471 1.5e-65 cspB K 'Cold-shock' DNA-binding domain
PBKDCIHP_01472 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBKDCIHP_01473 2e-132 KT Response regulator receiver domain protein
PBKDCIHP_01474 5.1e-100
PBKDCIHP_01475 4.2e-33 S Proteins of 100 residues with WXG
PBKDCIHP_01476 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PBKDCIHP_01477 6.1e-38 K 'Cold-shock' DNA-binding domain
PBKDCIHP_01478 2.4e-84 S LytR cell envelope-related transcriptional attenuator
PBKDCIHP_01479 3.8e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PBKDCIHP_01480 1.4e-187 moxR S ATPase family associated with various cellular activities (AAA)
PBKDCIHP_01481 2.8e-163 S Protein of unknown function DUF58
PBKDCIHP_01482 3.9e-85
PBKDCIHP_01483 3.3e-189 S von Willebrand factor (vWF) type A domain
PBKDCIHP_01484 8.4e-153 S von Willebrand factor (vWF) type A domain
PBKDCIHP_01485 3.1e-56
PBKDCIHP_01486 4.7e-256 S PGAP1-like protein
PBKDCIHP_01487 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
PBKDCIHP_01488 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
PBKDCIHP_01489 0.0 S Lysylphosphatidylglycerol synthase TM region
PBKDCIHP_01490 8.1e-42 hup L Belongs to the bacterial histone-like protein family
PBKDCIHP_01491 3.5e-285 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PBKDCIHP_01493 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
PBKDCIHP_01494 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
PBKDCIHP_01495 6.6e-130 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
PBKDCIHP_01496 9.6e-103 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PBKDCIHP_01497 4.7e-288 arc O AAA ATPase forming ring-shaped complexes
PBKDCIHP_01498 6.5e-125 apl 3.1.3.1 S SNARE associated Golgi protein
PBKDCIHP_01499 6.1e-118 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
PBKDCIHP_01500 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PBKDCIHP_01501 3.3e-132 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PBKDCIHP_01502 4.2e-189 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PBKDCIHP_01503 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
PBKDCIHP_01504 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PBKDCIHP_01505 1.3e-229 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PBKDCIHP_01506 1.5e-135 L IstB-like ATP binding protein
PBKDCIHP_01507 1.5e-100 L PFAM Integrase catalytic
PBKDCIHP_01508 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_01509 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_01510 2.8e-124 L PFAM Integrase catalytic
PBKDCIHP_01511 5.3e-07 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PBKDCIHP_01513 1.8e-36 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PBKDCIHP_01514 1.3e-198 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PBKDCIHP_01515 7.1e-132 cas4 3.1.12.1 L Domain of unknown function DUF83
PBKDCIHP_01516 3.5e-157 csd2 L CRISPR-associated protein Cas7
PBKDCIHP_01517 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
PBKDCIHP_01518 1.5e-137 cas5d S CRISPR-associated protein (Cas_Cas5)
PBKDCIHP_01519 1.1e-292 cas3 L DEAD-like helicases superfamily
PBKDCIHP_01520 8.8e-72 cas3 L DEAD-like helicases superfamily
PBKDCIHP_01521 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_01522 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_01523 1.8e-41 L Transposase
PBKDCIHP_01524 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PBKDCIHP_01525 3.1e-168 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PBKDCIHP_01526 1.9e-68 rbsD 5.4.99.62 G RbsD / FucU transport protein family
PBKDCIHP_01527 5.3e-162 rbsB G Periplasmic binding protein domain
PBKDCIHP_01528 4.9e-158 rbsC U Branched-chain amino acid transport system / permease component
PBKDCIHP_01529 1.6e-277 rbsA 3.6.3.17 G ATPases associated with a variety of cellular activities
PBKDCIHP_01530 2.6e-186 rbsR K helix_turn _helix lactose operon repressor
PBKDCIHP_01531 1.4e-38 L Transposase
PBKDCIHP_01532 7.6e-261 EGP Major Facilitator Superfamily
PBKDCIHP_01533 4.1e-164 rbsK 2.7.1.15 G Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PBKDCIHP_01534 7.6e-230 bdhA C Iron-containing alcohol dehydrogenase
PBKDCIHP_01535 7.1e-132 3.1.3.18 S Haloacid dehalogenase-like hydrolase
PBKDCIHP_01536 2.8e-190 rihB 3.2.2.1, 3.2.2.8 F Inosine-uridine preferring nucleoside hydrolase
PBKDCIHP_01537 2.6e-180 ydjH 2.7.1.15 G pfkB family carbohydrate kinase
PBKDCIHP_01538 1.4e-118 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PBKDCIHP_01539 2.1e-154 P ATPases associated with a variety of cellular activities
PBKDCIHP_01540 1.8e-153 P ATPases associated with a variety of cellular activities
PBKDCIHP_01541 6.4e-140 cbiQ P Cobalt transport protein
PBKDCIHP_01542 1.8e-100 2.7.7.65 T ECF transporter, substrate-specific component
PBKDCIHP_01543 0.0 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PBKDCIHP_01544 0.0 V ABC transporter transmembrane region
PBKDCIHP_01545 0.0 V ABC transporter, ATP-binding protein
PBKDCIHP_01546 3.4e-48 K MarR family
PBKDCIHP_01547 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PBKDCIHP_01548 1.1e-85 K Bacterial regulatory proteins, tetR family
PBKDCIHP_01549 3.8e-104 I Hydrolase, alpha beta domain protein
PBKDCIHP_01550 8.6e-248 S X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
PBKDCIHP_01551 7.6e-164 G Major Facilitator Superfamily
PBKDCIHP_01552 1.3e-73 K Bacterial regulatory proteins, tetR family
PBKDCIHP_01553 9.9e-40
PBKDCIHP_01554 1.3e-234 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PBKDCIHP_01555 7.7e-70 S Nucleotidyltransferase substrate binding protein like
PBKDCIHP_01556 3.3e-46 S Nucleotidyltransferase domain
PBKDCIHP_01557 9.7e-197 G Psort location CytoplasmicMembrane, score 10.00
PBKDCIHP_01558 1.8e-242 2.7.7.7 S Protein of unknown function (DUF4038)
PBKDCIHP_01559 3.9e-82 K Bacterial regulatory proteins, tetR family
PBKDCIHP_01560 1.5e-199 G Transporter major facilitator family protein
PBKDCIHP_01561 2.2e-124 macB_2 V ATPases associated with a variety of cellular activities
PBKDCIHP_01562 4.6e-19 macB_2 V Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides
PBKDCIHP_01563 2.9e-10 K Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBKDCIHP_01564 2e-32 T Transcriptional regulatory protein, C terminal
PBKDCIHP_01565 1.3e-27 T PhoQ Sensor
PBKDCIHP_01566 2.4e-35 T PhoQ Sensor
PBKDCIHP_01567 4.1e-69 mgtC S MgtC family
PBKDCIHP_01568 2.4e-202 G Transporter major facilitator family protein
PBKDCIHP_01569 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
PBKDCIHP_01570 7.2e-218 EGP Major facilitator Superfamily
PBKDCIHP_01571 1.9e-139 K Periplasmic binding protein domain
PBKDCIHP_01572 3.1e-32 osmC O OsmC-like protein
PBKDCIHP_01573 1.1e-111 3.5.1.4 J Amidase
PBKDCIHP_01574 2.4e-141 3.4.13.22 S hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
PBKDCIHP_01575 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_01576 1.4e-123 insK L Integrase core domain
PBKDCIHP_01577 7e-253 amyE G Bacterial extracellular solute-binding protein
PBKDCIHP_01578 4.8e-153 I Hydrolase, alpha beta domain protein
PBKDCIHP_01579 2.1e-44 L Transposase
PBKDCIHP_01580 1.4e-50 L Transposase DDE domain
PBKDCIHP_01581 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
PBKDCIHP_01582 2.8e-142 K Bacterial regulatory proteins, tetR family
PBKDCIHP_01583 5.5e-255 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
PBKDCIHP_01584 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
PBKDCIHP_01585 6.5e-136 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PBKDCIHP_01586 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
PBKDCIHP_01587 4.8e-257 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PBKDCIHP_01588 3.7e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PBKDCIHP_01589 4.1e-95 ywrO 1.6.5.2 S Flavodoxin-like fold
PBKDCIHP_01590 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PBKDCIHP_01591 3.2e-65 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PBKDCIHP_01592 3.7e-78 F Nucleoside 2-deoxyribosyltransferase
PBKDCIHP_01594 4.5e-200 S Endonuclease/Exonuclease/phosphatase family
PBKDCIHP_01595 5.8e-180 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PBKDCIHP_01596 5.1e-234 aspB E Aminotransferase class-V
PBKDCIHP_01597 8.5e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
PBKDCIHP_01598 4.8e-87 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PBKDCIHP_01599 1.2e-100 XK27_03610 K Acetyltransferase (GNAT) domain
PBKDCIHP_01600 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
PBKDCIHP_01601 4e-147 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PBKDCIHP_01602 9.2e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
PBKDCIHP_01603 6e-151 map 3.4.11.18 E Methionine aminopeptidase
PBKDCIHP_01604 6.7e-143 S Short repeat of unknown function (DUF308)
PBKDCIHP_01605 0.0 pepO 3.4.24.71 O Peptidase family M13
PBKDCIHP_01606 2.9e-114 L Single-strand binding protein family
PBKDCIHP_01607 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PBKDCIHP_01608 2.2e-100 pflA 1.97.1.4 O Radical SAM superfamily
PBKDCIHP_01609 1.4e-262 recD2 3.6.4.12 L PIF1-like helicase
PBKDCIHP_01610 7e-121 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PBKDCIHP_01611 1e-139 K Periplasmic binding protein-like domain
PBKDCIHP_01612 9.4e-256 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PBKDCIHP_01613 6.8e-181 G Transporter major facilitator family protein
PBKDCIHP_01614 5e-215 2.1.1.72 LV Eco57I restriction-modification methylase
PBKDCIHP_01615 4e-202 L SNF2 family N-terminal domain
PBKDCIHP_01616 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PBKDCIHP_01617 3e-213 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
PBKDCIHP_01618 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
PBKDCIHP_01619 2.5e-124 livF E ATPases associated with a variety of cellular activities
PBKDCIHP_01620 6.3e-162 E Branched-chain amino acid ATP-binding cassette transporter
PBKDCIHP_01621 4.5e-189 livM U Belongs to the binding-protein-dependent transport system permease family
PBKDCIHP_01622 5.4e-111 U Belongs to the binding-protein-dependent transport system permease family
PBKDCIHP_01623 1.8e-207 livK E Receptor family ligand binding region
PBKDCIHP_01624 8.2e-165 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PBKDCIHP_01625 3.7e-191 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PBKDCIHP_01626 1.3e-36 rpmE J Binds the 23S rRNA
PBKDCIHP_01628 5.6e-84 yebQ EGP Major facilitator Superfamily
PBKDCIHP_01629 7.1e-152
PBKDCIHP_01630 3.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PBKDCIHP_01631 2.5e-163 dkgB S Oxidoreductase, aldo keto reductase family protein
PBKDCIHP_01632 4.3e-16 EGP Major facilitator superfamily
PBKDCIHP_01633 1.7e-85 K Winged helix DNA-binding domain
PBKDCIHP_01634 5.3e-178 glkA 2.7.1.2 G ROK family
PBKDCIHP_01636 8.5e-307 EGP Major Facilitator Superfamily
PBKDCIHP_01637 0.0 yjjK S ATP-binding cassette protein, ChvD family
PBKDCIHP_01638 2.5e-169 tesB I Thioesterase-like superfamily
PBKDCIHP_01639 3.5e-86 S Protein of unknown function (DUF3180)
PBKDCIHP_01640 6.5e-226 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PBKDCIHP_01641 6.4e-162 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PBKDCIHP_01642 1.1e-96 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
PBKDCIHP_01643 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PBKDCIHP_01644 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PBKDCIHP_01645 4.4e-211 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PBKDCIHP_01646 1.9e-251 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
PBKDCIHP_01647 1.8e-298
PBKDCIHP_01648 1.5e-189 natA V ATPases associated with a variety of cellular activities
PBKDCIHP_01649 4.7e-235 epsG M Glycosyl transferase family 21
PBKDCIHP_01650 1.9e-281 S AI-2E family transporter
PBKDCIHP_01651 2.3e-178 3.4.14.13 M Glycosyltransferase like family 2
PBKDCIHP_01652 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
PBKDCIHP_01653 1.6e-262 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
PBKDCIHP_01656 2.9e-160 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PBKDCIHP_01658 2.1e-15 int8 L Phage integrase family
PBKDCIHP_01659 1.5e-12 sprF 4.6.1.1 M Cell surface antigen C-terminus
PBKDCIHP_01660 1.9e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
PBKDCIHP_01661 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PBKDCIHP_01662 4.8e-185 lacR K Transcriptional regulator, LacI family
PBKDCIHP_01663 5.3e-21 L Helix-turn-helix domain
PBKDCIHP_01664 7.5e-247 G Bacterial extracellular solute-binding protein
PBKDCIHP_01665 1.4e-215 GK ROK family
PBKDCIHP_01666 0.0 G Glycosyl hydrolase family 20, domain 2
PBKDCIHP_01667 5.6e-08 L HTH-like domain
PBKDCIHP_01668 8.9e-219 vex3 V ABC transporter permease
PBKDCIHP_01669 4e-210 vex1 V Efflux ABC transporter, permease protein
PBKDCIHP_01670 4.1e-110 vex2 V ABC transporter, ATP-binding protein
PBKDCIHP_01671 7.7e-97 ptpA 3.1.3.48 T low molecular weight
PBKDCIHP_01672 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
PBKDCIHP_01673 1e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PBKDCIHP_01674 7.7e-73 attW O OsmC-like protein
PBKDCIHP_01675 1.5e-189 T Universal stress protein family
PBKDCIHP_01676 3e-104 M NlpC/P60 family
PBKDCIHP_01677 2.9e-99 M NlpC/P60 family
PBKDCIHP_01678 1.7e-168 usp 3.5.1.28 CBM50 S CHAP domain
PBKDCIHP_01679 5.7e-211 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PBKDCIHP_01680 1.8e-32
PBKDCIHP_01681 3.3e-172 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PBKDCIHP_01682 1.6e-115 phoU P Plays a role in the regulation of phosphate uptake
PBKDCIHP_01683 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PBKDCIHP_01684 1.1e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PBKDCIHP_01685 2.3e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PBKDCIHP_01687 5.8e-214 araJ EGP Major facilitator Superfamily
PBKDCIHP_01688 0.0 S Domain of unknown function (DUF4037)
PBKDCIHP_01689 2.9e-116 S Protein of unknown function (DUF4125)
PBKDCIHP_01690 0.0 S alpha beta
PBKDCIHP_01691 3.7e-67
PBKDCIHP_01692 2.4e-290 pspC KT PspC domain
PBKDCIHP_01693 1.2e-236 tcsS3 KT PspC domain
PBKDCIHP_01694 4.4e-118 degU K helix_turn_helix, Lux Regulon
PBKDCIHP_01695 4.1e-168 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PBKDCIHP_01696 8.9e-206 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
PBKDCIHP_01697 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
PBKDCIHP_01698 2.5e-167 G ABC transporter permease
PBKDCIHP_01699 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01700 6.1e-249 G Bacterial extracellular solute-binding protein
PBKDCIHP_01702 3.3e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PBKDCIHP_01703 6.1e-208 I Diacylglycerol kinase catalytic domain
PBKDCIHP_01704 1.3e-162 arbG K CAT RNA binding domain
PBKDCIHP_01705 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
PBKDCIHP_01706 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PBKDCIHP_01707 8.9e-198 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PBKDCIHP_01708 3.6e-73 K Transcriptional regulator
PBKDCIHP_01709 4.2e-278 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PBKDCIHP_01710 1e-172 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PBKDCIHP_01711 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PBKDCIHP_01713 1.6e-98
PBKDCIHP_01714 3.6e-261 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PBKDCIHP_01715 2.8e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
PBKDCIHP_01716 2.3e-218 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PBKDCIHP_01717 4e-81 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PBKDCIHP_01718 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PBKDCIHP_01719 7.7e-186 nusA K Participates in both transcription termination and antitermination
PBKDCIHP_01720 2.1e-126
PBKDCIHP_01721 1.9e-99 K helix_turn _helix lactose operon repressor
PBKDCIHP_01723 7.2e-152 E Transglutaminase/protease-like homologues
PBKDCIHP_01724 0.0 gcs2 S A circularly permuted ATPgrasp
PBKDCIHP_01725 8.7e-170 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PBKDCIHP_01726 1.6e-62 rplQ J Ribosomal protein L17
PBKDCIHP_01727 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBKDCIHP_01728 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PBKDCIHP_01729 1.2e-61 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PBKDCIHP_01730 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PBKDCIHP_01731 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PBKDCIHP_01732 2.2e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PBKDCIHP_01733 6.9e-248 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PBKDCIHP_01734 8.1e-76 rplO J binds to the 23S rRNA
PBKDCIHP_01735 7e-26 rpmD J Ribosomal protein L30p/L7e
PBKDCIHP_01736 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PBKDCIHP_01737 1.5e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PBKDCIHP_01738 5.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PBKDCIHP_01739 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PBKDCIHP_01740 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PBKDCIHP_01741 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PBKDCIHP_01742 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PBKDCIHP_01743 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PBKDCIHP_01744 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PBKDCIHP_01745 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
PBKDCIHP_01746 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PBKDCIHP_01747 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PBKDCIHP_01748 9.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PBKDCIHP_01749 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PBKDCIHP_01750 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PBKDCIHP_01751 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PBKDCIHP_01752 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
PBKDCIHP_01753 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PBKDCIHP_01754 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
PBKDCIHP_01755 1.2e-134 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
PBKDCIHP_01756 4.3e-145 ywiC S YwiC-like protein
PBKDCIHP_01757 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_01758 1.4e-123 insK L Integrase core domain
PBKDCIHP_01759 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PBKDCIHP_01760 3.1e-170 rhaR_1 K helix_turn_helix, arabinose operon control protein
PBKDCIHP_01761 1.5e-194 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
PBKDCIHP_01762 2.7e-196 EGP Major facilitator Superfamily
PBKDCIHP_01763 2.3e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PBKDCIHP_01764 6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PBKDCIHP_01765 2.2e-233 EGP Major facilitator Superfamily
PBKDCIHP_01766 2.3e-179 tdh 1.1.1.14 C Zinc-binding dehydrogenase
PBKDCIHP_01767 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PBKDCIHP_01768 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
PBKDCIHP_01769 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PBKDCIHP_01770 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PBKDCIHP_01771 8.4e-117
PBKDCIHP_01772 3.4e-112 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
PBKDCIHP_01773 1.2e-183 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBKDCIHP_01774 1.4e-117 M Bacterial capsule synthesis protein PGA_cap
PBKDCIHP_01775 6.3e-245 bglA 3.2.1.21 G Glycosyl hydrolase family 1
PBKDCIHP_01776 1.8e-159 U Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01777 5.5e-164 malC U Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01778 1.7e-243 malE G Bacterial extracellular solute-binding protein
PBKDCIHP_01779 1.4e-217 rbsR K helix_turn _helix lactose operon repressor
PBKDCIHP_01780 4.4e-21
PBKDCIHP_01781 1.9e-66 L Helix-turn-helix domain
PBKDCIHP_01782 1.4e-123 insK L Integrase core domain
PBKDCIHP_01784 3.1e-64 S EamA-like transporter family
PBKDCIHP_01785 3.9e-21 S EamA-like transporter family
PBKDCIHP_01786 3.7e-238 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBKDCIHP_01787 6.1e-224 dapC E Aminotransferase class I and II
PBKDCIHP_01788 2.9e-59 fdxA C 4Fe-4S binding domain
PBKDCIHP_01789 8e-269 E aromatic amino acid transport protein AroP K03293
PBKDCIHP_01790 1.9e-220 murB 1.3.1.98 M Cell wall formation
PBKDCIHP_01791 4.1e-25 rpmG J Ribosomal protein L33
PBKDCIHP_01795 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PBKDCIHP_01796 2.4e-135
PBKDCIHP_01797 2.6e-85 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
PBKDCIHP_01798 1.5e-56 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
PBKDCIHP_01799 4.3e-31 fmdB S Putative regulatory protein
PBKDCIHP_01800 3.6e-106 flgA NO SAF
PBKDCIHP_01801 6.6e-19 L Superfamily I DNA and RNA helicases and helicase subunits
PBKDCIHP_01802 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
PBKDCIHP_01803 8.9e-192 T Forkhead associated domain
PBKDCIHP_01804 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PBKDCIHP_01805 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PBKDCIHP_01806 9e-147 3.2.1.8 S alpha beta
PBKDCIHP_01807 1.1e-251 pbuO S Permease family
PBKDCIHP_01808 2.1e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PBKDCIHP_01809 1.3e-171 pstA P Phosphate transport system permease
PBKDCIHP_01810 5.7e-156 pstC P probably responsible for the translocation of the substrate across the membrane
PBKDCIHP_01811 1.5e-200 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
PBKDCIHP_01812 3.8e-142 KT Transcriptional regulatory protein, C terminal
PBKDCIHP_01813 6.7e-208 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PBKDCIHP_01814 1e-240 EGP Sugar (and other) transporter
PBKDCIHP_01815 5.7e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PBKDCIHP_01816 1.9e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PBKDCIHP_01817 3.4e-216 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PBKDCIHP_01818 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
PBKDCIHP_01819 3.6e-45 D nuclear chromosome segregation
PBKDCIHP_01820 1.7e-125 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PBKDCIHP_01821 8.4e-151 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PBKDCIHP_01822 8e-199 yfiH Q Multi-copper polyphenol oxidoreductase laccase
PBKDCIHP_01823 1.9e-302 yegQ O Peptidase family U32 C-terminal domain
PBKDCIHP_01824 3.7e-179 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PBKDCIHP_01825 2.2e-102 rsmD 2.1.1.171 L Conserved hypothetical protein 95
PBKDCIHP_01826 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
PBKDCIHP_01827 2.5e-29 rpmB J Ribosomal L28 family
PBKDCIHP_01828 3.2e-197 yegV G pfkB family carbohydrate kinase
PBKDCIHP_01829 6.9e-237 yxiO S Vacuole effluxer Atg22 like
PBKDCIHP_01830 3.7e-82 soxR K helix_turn_helix, mercury resistance
PBKDCIHP_01831 1.5e-61 T Toxic component of a toxin-antitoxin (TA) module
PBKDCIHP_01832 2e-52 relB L RelB antitoxin
PBKDCIHP_01833 3.6e-22 yxiO G Major facilitator Superfamily
PBKDCIHP_01834 5e-193 K Helix-turn-helix XRE-family like proteins
PBKDCIHP_01835 1e-116 S Alpha/beta hydrolase family
PBKDCIHP_01839 4.7e-16 EGP Major facilitator Superfamily
PBKDCIHP_01840 9.5e-46 XK27_04590 S NADPH-dependent FMN reductase
PBKDCIHP_01842 4.5e-294 pccB I Carboxyl transferase domain
PBKDCIHP_01843 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PBKDCIHP_01844 2.2e-92 bioY S BioY family
PBKDCIHP_01845 3.1e-150 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
PBKDCIHP_01846 8.5e-154
PBKDCIHP_01847 2.3e-212
PBKDCIHP_01848 2.2e-165 QT PucR C-terminal helix-turn-helix domain
PBKDCIHP_01849 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PBKDCIHP_01850 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PBKDCIHP_01851 2.5e-146 K Psort location Cytoplasmic, score
PBKDCIHP_01852 1.4e-110 nusG K Participates in transcription elongation, termination and antitermination
PBKDCIHP_01853 4.7e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PBKDCIHP_01855 1.9e-228 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
PBKDCIHP_01856 9.7e-220 G polysaccharide deacetylase
PBKDCIHP_01857 1.9e-195 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PBKDCIHP_01858 2.1e-310 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PBKDCIHP_01859 5.8e-39 rpmA J Ribosomal L27 protein
PBKDCIHP_01860 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PBKDCIHP_01861 0.0 rne 3.1.26.12 J Ribonuclease E/G family
PBKDCIHP_01862 2.5e-233 dapE 3.5.1.18 E Peptidase dimerisation domain
PBKDCIHP_01863 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
PBKDCIHP_01864 5.7e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PBKDCIHP_01865 3.2e-149 S Amidohydrolase
PBKDCIHP_01866 1.7e-195 fucP G Major Facilitator Superfamily
PBKDCIHP_01867 2.8e-148 IQ KR domain
PBKDCIHP_01868 1.2e-249 4.2.1.68 M Enolase C-terminal domain-like
PBKDCIHP_01869 1.2e-191 K Bacterial regulatory proteins, lacI family
PBKDCIHP_01870 3.7e-255 V Efflux ABC transporter, permease protein
PBKDCIHP_01871 3.3e-138 V ATPases associated with a variety of cellular activities
PBKDCIHP_01872 2.1e-28 S Protein of unknown function (DUF1778)
PBKDCIHP_01873 2e-91 K Acetyltransferase (GNAT) family
PBKDCIHP_01874 1.7e-276 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
PBKDCIHP_01875 2.7e-184 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PBKDCIHP_01876 1.1e-237 hom 1.1.1.3 E Homoserine dehydrogenase
PBKDCIHP_01877 5.6e-54 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
PBKDCIHP_01878 9.4e-57 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PBKDCIHP_01879 1.6e-304 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PBKDCIHP_01880 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PBKDCIHP_01881 5.2e-130 K Bacterial regulatory proteins, tetR family
PBKDCIHP_01882 1.4e-221 G Transmembrane secretion effector
PBKDCIHP_01883 2.6e-255 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PBKDCIHP_01884 5.3e-256 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
PBKDCIHP_01885 2.1e-157 ET Bacterial periplasmic substrate-binding proteins
PBKDCIHP_01886 8.2e-120 ytmL P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01887 3.6e-140 P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01888 3.5e-105 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
PBKDCIHP_01889 1.3e-131 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
PBKDCIHP_01890 1.8e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
PBKDCIHP_01891 2.2e-21 2.7.13.3 T Histidine kinase
PBKDCIHP_01892 1.3e-17 S Bacterial PH domain
PBKDCIHP_01893 1.4e-132 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PBKDCIHP_01894 8.4e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PBKDCIHP_01895 2.2e-140 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
PBKDCIHP_01896 3.4e-263 S Calcineurin-like phosphoesterase
PBKDCIHP_01897 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PBKDCIHP_01898 2.5e-232 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
PBKDCIHP_01899 4.2e-131
PBKDCIHP_01901 0.0 G N-terminal domain of (some) glycogen debranching enzymes
PBKDCIHP_01902 9.1e-140 P Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01903 9.8e-209 U Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01904 2.5e-207 G Bacterial extracellular solute-binding protein
PBKDCIHP_01905 5e-129 K helix_turn _helix lactose operon repressor
PBKDCIHP_01906 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PBKDCIHP_01907 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PBKDCIHP_01908 5.7e-216 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PBKDCIHP_01909 2.7e-218 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
PBKDCIHP_01911 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PBKDCIHP_01912 5e-165 S Auxin Efflux Carrier
PBKDCIHP_01913 1.7e-156 fahA Q Fumarylacetoacetate (FAA) hydrolase family
PBKDCIHP_01914 9.5e-111 S Domain of unknown function (DUF4190)
PBKDCIHP_01915 1.7e-165
PBKDCIHP_01916 2.7e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
PBKDCIHP_01917 4.2e-45 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
PBKDCIHP_01918 2.2e-58 G Branched-chain amino acid transport system / permease component
PBKDCIHP_01919 7.3e-72 P branched-chain amino acid ABC transporter, permease protein
PBKDCIHP_01920 6.3e-120 G ATPases associated with a variety of cellular activities
PBKDCIHP_01921 2.1e-79 G ABC-type sugar transport system periplasmic component
PBKDCIHP_01922 2.3e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
PBKDCIHP_01923 1e-75 xylR GK ROK family
PBKDCIHP_01924 9.6e-36
PBKDCIHP_01925 2.7e-199 M Glycosyltransferase like family 2
PBKDCIHP_01926 7.8e-183 S Predicted membrane protein (DUF2142)
PBKDCIHP_01927 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PBKDCIHP_01928 0.0 GT2,GT4 M Glycosyl transferase family 2
PBKDCIHP_01929 1.1e-164 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
PBKDCIHP_01930 1.4e-118 rgpC U Transport permease protein
PBKDCIHP_01931 1.2e-168 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PBKDCIHP_01932 8.7e-289 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PBKDCIHP_01933 5.5e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PBKDCIHP_01934 0.0
PBKDCIHP_01935 8.6e-168 rfbJ M Glycosyl transferase family 2
PBKDCIHP_01936 2.9e-15 M nuclease
PBKDCIHP_01937 3.8e-67 M L,D-transpeptidase catalytic domain
PBKDCIHP_01938 4.1e-163 lytC 3.1.4.46, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
PBKDCIHP_01939 3.8e-225 K Cell envelope-related transcriptional attenuator domain
PBKDCIHP_01940 3.7e-255 V ABC transporter permease
PBKDCIHP_01941 1.2e-184 V ABC transporter
PBKDCIHP_01942 5.3e-144 T HD domain
PBKDCIHP_01943 1.6e-160 S Glutamine amidotransferase domain
PBKDCIHP_01944 0.0 kup P Transport of potassium into the cell
PBKDCIHP_01945 5.3e-186 tatD L TatD related DNase
PBKDCIHP_01946 0.0 yknV V ABC transporter
PBKDCIHP_01947 0.0 mdlA2 V ABC transporter
PBKDCIHP_01948 3.2e-49 G domain, Protein
PBKDCIHP_01949 4.4e-09 G domain, Protein
PBKDCIHP_01950 5.9e-263 S AAA domain
PBKDCIHP_01951 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PBKDCIHP_01952 0.0 oppD P Belongs to the ABC transporter superfamily
PBKDCIHP_01953 3.2e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
PBKDCIHP_01954 2.9e-151 appB EP Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01955 5.2e-268 pepC 3.4.22.40 E Peptidase C1-like family
PBKDCIHP_01956 6.7e-47
PBKDCIHP_01957 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PBKDCIHP_01958 2.3e-119
PBKDCIHP_01959 3.1e-184 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PBKDCIHP_01961 2.3e-257 G MFS/sugar transport protein
PBKDCIHP_01962 2.3e-181 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PBKDCIHP_01963 0.0 lmrA2 V ABC transporter transmembrane region
PBKDCIHP_01964 0.0 lmrA1 V ABC transporter, ATP-binding protein
PBKDCIHP_01965 3.9e-90 ydgJ K helix_turn_helix multiple antibiotic resistance protein
PBKDCIHP_01966 2.6e-236 cycA E Amino acid permease
PBKDCIHP_01967 4.1e-26 cycA E Amino acid permease
PBKDCIHP_01968 0.0 V FtsX-like permease family
PBKDCIHP_01969 9.8e-129 V ABC transporter
PBKDCIHP_01970 4.5e-269 aroP E aromatic amino acid transport protein AroP K03293
PBKDCIHP_01971 2.2e-105 S Protein of unknown function, DUF624
PBKDCIHP_01972 6.8e-153 rafG G ABC transporter permease
PBKDCIHP_01973 4.1e-145 malC G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01974 5e-182 K Psort location Cytoplasmic, score
PBKDCIHP_01975 2.1e-182 amyE G Bacterial extracellular solute-binding protein
PBKDCIHP_01976 1.5e-58 amyE G Bacterial extracellular solute-binding protein
PBKDCIHP_01977 8e-102 G Phosphoglycerate mutase family
PBKDCIHP_01978 4.4e-59 S Protein of unknown function (DUF4235)
PBKDCIHP_01979 4.8e-137 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
PBKDCIHP_01980 0.0 pip S YhgE Pip domain protein
PBKDCIHP_01981 5.3e-280 pip S YhgE Pip domain protein
PBKDCIHP_01982 1.8e-40
PBKDCIHP_01983 3.1e-15 S COG NOG14600 non supervised orthologous group
PBKDCIHP_01984 9.2e-10
PBKDCIHP_01985 3.8e-15 S COG NOG14600 non supervised orthologous group
PBKDCIHP_01986 9.2e-10
PBKDCIHP_01988 3.6e-145 cobB2 K Sir2 family
PBKDCIHP_01989 1.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
PBKDCIHP_01990 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PBKDCIHP_01991 2.9e-154 G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01992 8.8e-149 malC G Binding-protein-dependent transport system inner membrane component
PBKDCIHP_01993 2.3e-245 msmE7 G Bacterial extracellular solute-binding protein
PBKDCIHP_01994 1.7e-229 nagC GK ROK family
PBKDCIHP_01995 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
PBKDCIHP_01996 8.3e-78 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PBKDCIHP_01997 0.0 yjcE P Sodium/hydrogen exchanger family
PBKDCIHP_01998 2.5e-120 S membrane transporter protein
PBKDCIHP_01999 8.1e-145 ypfH S Phospholipase/Carboxylesterase
PBKDCIHP_02000 1.4e-153
PBKDCIHP_02001 2.2e-110 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
PBKDCIHP_02002 2e-37
PBKDCIHP_02003 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
PBKDCIHP_02004 2e-16 K helix_turn _helix lactose operon repressor
PBKDCIHP_02005 7.5e-86 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PBKDCIHP_02006 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
PBKDCIHP_02007 3.5e-206 EGP Major facilitator Superfamily
PBKDCIHP_02008 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PBKDCIHP_02009 5.9e-168 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PBKDCIHP_02010 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PBKDCIHP_02011 1.6e-271 KLT Domain of unknown function (DUF4032)
PBKDCIHP_02012 4.4e-155
PBKDCIHP_02013 7.6e-18 tnp7109-21 L Integrase core domain
PBKDCIHP_02014 1.1e-131 K helix_turn _helix lactose operon repressor
PBKDCIHP_02015 4.2e-146 G Periplasmic binding protein domain
PBKDCIHP_02016 8.7e-178 3.6.3.17 G ATPases associated with a variety of cellular activities
PBKDCIHP_02017 5e-142 U Branched-chain amino acid transport system / permease component
PBKDCIHP_02018 1e-185
PBKDCIHP_02019 1.3e-108 tnp3514b L Winged helix-turn helix
PBKDCIHP_02020 5.8e-296 L PFAM Integrase catalytic
PBKDCIHP_02021 4.1e-144 L IstB-like ATP binding protein
PBKDCIHP_02023 6.2e-48 S LPXTG-motif cell wall anchor domain protein
PBKDCIHP_02024 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
PBKDCIHP_02025 6e-137 K UTRA domain
PBKDCIHP_02026 6.4e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PBKDCIHP_02027 3.7e-45 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PBKDCIHP_02028 3.6e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PBKDCIHP_02029 1.5e-219 2.4.1.166 GT2 M Glycosyltransferase like family 2
PBKDCIHP_02030 5.1e-142 K LytTr DNA-binding domain
PBKDCIHP_02031 3.2e-229 T GHKL domain
PBKDCIHP_02032 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBKDCIHP_02034 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBKDCIHP_02035 1.6e-88 nrdI F Probably involved in ribonucleotide reductase function
PBKDCIHP_02036 3.1e-43 nrdH O Glutaredoxin
PBKDCIHP_02037 2.8e-122 S Psort location CytoplasmicMembrane, score
PBKDCIHP_02038 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PBKDCIHP_02039 8.5e-119 K Helix-turn-helix XRE-family like proteins
PBKDCIHP_02040 6.8e-127 S Protein of unknown function (DUF3990)
PBKDCIHP_02041 2.9e-42 kcsA U Ion channel
PBKDCIHP_02042 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
PBKDCIHP_02043 0.0 KLT Protein tyrosine kinase
PBKDCIHP_02044 3.6e-137 O Thioredoxin
PBKDCIHP_02046 4.5e-216 S G5
PBKDCIHP_02047 2.2e-168 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PBKDCIHP_02048 7.2e-175 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PBKDCIHP_02049 1.8e-110 S LytR cell envelope-related transcriptional attenuator
PBKDCIHP_02050 3.2e-283 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
PBKDCIHP_02051 9e-165 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
PBKDCIHP_02052 0.0
PBKDCIHP_02053 0.0 murJ KLT MviN-like protein
PBKDCIHP_02054 3.1e-176 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PBKDCIHP_02055 4.1e-226 parB K Belongs to the ParB family
PBKDCIHP_02056 2.1e-174 parA D CobQ CobB MinD ParA nucleotide binding domain protein
PBKDCIHP_02057 1.7e-122 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PBKDCIHP_02058 1.5e-92 jag S Putative single-stranded nucleic acids-binding domain
PBKDCIHP_02059 1.7e-182 yidC U Membrane protein insertase, YidC Oxa1 family
PBKDCIHP_02060 1.6e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PBKDCIHP_02061 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)