ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDLKLNFD_00008 5.5e-08
PDLKLNFD_00018 1.3e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PDLKLNFD_00019 2.2e-139 yhfI S Metallo-beta-lactamase superfamily
PDLKLNFD_00020 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDLKLNFD_00021 2.2e-131 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDLKLNFD_00022 2.2e-204 coiA 3.6.4.12 S Competence protein
PDLKLNFD_00023 0.0 pepF E oligoendopeptidase F
PDLKLNFD_00024 3.6e-114 yjbH Q Thioredoxin
PDLKLNFD_00025 2.7e-120 yjbM 2.7.6.5 S RelA SpoT domain protein
PDLKLNFD_00026 4.7e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDLKLNFD_00027 4.4e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PDLKLNFD_00028 5.1e-116 cutC P Participates in the control of copper homeostasis
PDLKLNFD_00029 7.4e-194 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PDLKLNFD_00030 3.9e-57 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDLKLNFD_00031 4.3e-206 XK27_05220 S AI-2E family transporter
PDLKLNFD_00032 8.6e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDLKLNFD_00033 3.1e-161 rrmA 2.1.1.187 H Methyltransferase
PDLKLNFD_00035 9.8e-210 brnQ U Component of the transport system for branched-chain amino acids
PDLKLNFD_00036 3.1e-113 ywnB S NAD(P)H-binding
PDLKLNFD_00037 1.8e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDLKLNFD_00038 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PDLKLNFD_00039 4.2e-175 corA P CorA-like Mg2+ transporter protein
PDLKLNFD_00040 1.9e-62 S Protein of unknown function (DUF3397)
PDLKLNFD_00041 1.9e-77 mraZ K Belongs to the MraZ family
PDLKLNFD_00042 5.5e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDLKLNFD_00043 7.5e-54 ftsL D Cell division protein FtsL
PDLKLNFD_00044 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PDLKLNFD_00045 8.3e-179 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDLKLNFD_00046 2.3e-259 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDLKLNFD_00047 1.5e-197 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDLKLNFD_00048 5.8e-163 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDLKLNFD_00049 5.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDLKLNFD_00050 1.4e-229 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDLKLNFD_00051 3.3e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDLKLNFD_00052 1.2e-36 yggT S YGGT family
PDLKLNFD_00053 9.9e-146 ylmH S S4 domain protein
PDLKLNFD_00054 1.2e-86 divIVA D DivIVA domain protein
PDLKLNFD_00055 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDLKLNFD_00056 8.2e-74 cylA V abc transporter atp-binding protein
PDLKLNFD_00057 1.2e-80 cylB U ABC-2 type transporter
PDLKLNFD_00058 2.9e-36 K LytTr DNA-binding domain
PDLKLNFD_00059 9e-18 S Protein of unknown function (DUF3021)
PDLKLNFD_00060 1.1e-189 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDLKLNFD_00061 1.9e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PDLKLNFD_00062 4.6e-28
PDLKLNFD_00063 1.1e-121 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDLKLNFD_00064 7.1e-217 iscS 2.8.1.7 E Aminotransferase class V
PDLKLNFD_00065 4.9e-57 XK27_04120 S Putative amino acid metabolism
PDLKLNFD_00066 9e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDLKLNFD_00067 1.3e-241 ktrB P Potassium uptake protein
PDLKLNFD_00068 2.6e-115 ktrA P domain protein
PDLKLNFD_00069 2.3e-120 N WxL domain surface cell wall-binding
PDLKLNFD_00070 1.7e-193 S Bacterial protein of unknown function (DUF916)
PDLKLNFD_00071 4.2e-267 N domain, Protein
PDLKLNFD_00072 5.5e-121 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
PDLKLNFD_00073 1.6e-120 S Repeat protein
PDLKLNFD_00074 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDLKLNFD_00075 4.4e-172 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDLKLNFD_00076 4.1e-108 mltD CBM50 M NlpC P60 family protein
PDLKLNFD_00077 1.7e-28
PDLKLNFD_00078 5.7e-188 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PDLKLNFD_00079 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDLKLNFD_00080 3.1e-33 ykzG S Belongs to the UPF0356 family
PDLKLNFD_00081 1.6e-85
PDLKLNFD_00082 3.1e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDLKLNFD_00083 1.6e-210 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PDLKLNFD_00084 4.5e-180 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PDLKLNFD_00085 1.8e-208 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDLKLNFD_00086 1.2e-266 lpdA 1.8.1.4 C Dehydrogenase
PDLKLNFD_00087 6.8e-162 1.1.1.27 C L-malate dehydrogenase activity
PDLKLNFD_00088 3.3e-46 yktA S Belongs to the UPF0223 family
PDLKLNFD_00089 1.2e-135 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PDLKLNFD_00090 0.0 typA T GTP-binding protein TypA
PDLKLNFD_00091 4.1e-197
PDLKLNFD_00092 7.6e-29
PDLKLNFD_00093 1.3e-61
PDLKLNFD_00094 5.1e-259 ica2 GT2 M Glycosyl transferase family group 2
PDLKLNFD_00095 3.5e-240
PDLKLNFD_00096 1.6e-205 ftsW D Belongs to the SEDS family
PDLKLNFD_00097 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PDLKLNFD_00098 1.5e-49 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PDLKLNFD_00099 1.1e-101 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PDLKLNFD_00100 1.4e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDLKLNFD_00101 1.6e-196 ylbL T Belongs to the peptidase S16 family
PDLKLNFD_00102 1.3e-120 comEA L Competence protein ComEA
PDLKLNFD_00103 6.4e-79 comEB 3.5.4.12 F ComE operon protein 2
PDLKLNFD_00104 0.0 comEC S Competence protein ComEC
PDLKLNFD_00105 1.1e-187 holA 2.7.7.7 L DNA polymerase III delta subunit
PDLKLNFD_00106 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
PDLKLNFD_00107 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDLKLNFD_00108 2.8e-192 mdtG EGP Major Facilitator Superfamily
PDLKLNFD_00109 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDLKLNFD_00110 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDLKLNFD_00111 2.2e-157 S Tetratricopeptide repeat
PDLKLNFD_00112 6.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDLKLNFD_00113 4.1e-213 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDLKLNFD_00114 3.3e-236 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDLKLNFD_00115 5.1e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
PDLKLNFD_00116 2.2e-49 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PDLKLNFD_00117 9.9e-73 S Iron-sulphur cluster biosynthesis
PDLKLNFD_00118 4.3e-22
PDLKLNFD_00119 9.2e-270 glnPH2 P ABC transporter permease
PDLKLNFD_00120 1.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDLKLNFD_00121 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDLKLNFD_00122 9e-128 epsB M biosynthesis protein
PDLKLNFD_00123 7.3e-124 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PDLKLNFD_00124 3.5e-146 ywqE 3.1.3.48 GM PHP domain protein
PDLKLNFD_00125 9.6e-180 cps4D 5.1.3.2 M RmlD substrate binding domain
PDLKLNFD_00126 1.8e-127 tuaA M Bacterial sugar transferase
PDLKLNFD_00127 4.6e-194 cps4F 2.4.1.21, 2.4.1.306 GT4,GT5 M Glycosyl transferases group 1
PDLKLNFD_00128 1.2e-178 cps4G M Glycosyltransferase Family 4
PDLKLNFD_00129 2e-228
PDLKLNFD_00130 3.3e-175 cps4I M Glycosyltransferase like family 2
PDLKLNFD_00131 2.5e-259 cps4J S Polysaccharide biosynthesis protein
PDLKLNFD_00132 1e-251 cpdA S Calcineurin-like phosphoesterase
PDLKLNFD_00133 6.7e-292 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
PDLKLNFD_00134 4.6e-171 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PDLKLNFD_00135 1.5e-135 fruR K DeoR C terminal sensor domain
PDLKLNFD_00136 2.4e-245 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDLKLNFD_00137 3.2e-46
PDLKLNFD_00138 2.8e-179 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDLKLNFD_00139 5.6e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKLNFD_00140 2e-50 yrvD S Lipopolysaccharide assembly protein A domain
PDLKLNFD_00141 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PDLKLNFD_00142 2.9e-93 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDLKLNFD_00143 1e-102 K Helix-turn-helix domain
PDLKLNFD_00144 1.6e-211 EGP Major facilitator Superfamily
PDLKLNFD_00145 8.5e-57 ybjQ S Belongs to the UPF0145 family
PDLKLNFD_00146 2.9e-142 Q Methyltransferase
PDLKLNFD_00147 1.6e-31
PDLKLNFD_00148 5.9e-62 L Belongs to the 'phage' integrase family
PDLKLNFD_00154 7.9e-11 tcdC
PDLKLNFD_00155 1.6e-83 K Peptidase S24-like
PDLKLNFD_00156 2.9e-11
PDLKLNFD_00157 2.9e-64 S DNA binding
PDLKLNFD_00160 5.6e-10
PDLKLNFD_00166 1.5e-55 L DnaD domain protein
PDLKLNFD_00167 1.9e-144 pi346 L IstB-like ATP binding protein
PDLKLNFD_00169 4.2e-44
PDLKLNFD_00172 2.8e-15
PDLKLNFD_00173 1.7e-95 2.1.1.37 L C-5 cytosine-specific DNA methylase
PDLKLNFD_00174 1.8e-65 S Transcriptional regulator, RinA family
PDLKLNFD_00176 9.2e-15
PDLKLNFD_00177 1.2e-88 L HNH nucleases
PDLKLNFD_00178 2e-45 L Phage terminase, small subunit
PDLKLNFD_00179 1.5e-179 S Phage Terminase
PDLKLNFD_00180 2.2e-22 S Protein of unknown function (DUF1056)
PDLKLNFD_00181 4.4e-206 S Phage portal protein
PDLKLNFD_00182 2.4e-125 S Clp protease
PDLKLNFD_00183 6.8e-210 S Phage capsid family
PDLKLNFD_00184 9.1e-56 S Phage gp6-like head-tail connector protein
PDLKLNFD_00185 6.8e-25 S Phage head-tail joining protein
PDLKLNFD_00186 2.7e-39
PDLKLNFD_00187 7.7e-27
PDLKLNFD_00188 3.2e-70 S Phage tail tube protein
PDLKLNFD_00191 0.0 S peptidoglycan catabolic process
PDLKLNFD_00192 0.0 S Phage tail protein
PDLKLNFD_00193 0.0 S Phage minor structural protein
PDLKLNFD_00194 3.4e-193
PDLKLNFD_00197 2.7e-51
PDLKLNFD_00198 4.5e-195 lys M Glycosyl hydrolases family 25
PDLKLNFD_00199 3.3e-37 S Haemolysin XhlA
PDLKLNFD_00202 4.5e-230 rodA D Cell cycle protein
PDLKLNFD_00203 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
PDLKLNFD_00204 7.9e-143 P ATPases associated with a variety of cellular activities
PDLKLNFD_00205 2.1e-221 lytR5 K Cell envelope-related transcriptional attenuator domain
PDLKLNFD_00206 9.2e-101 L Helix-turn-helix domain
PDLKLNFD_00207 3.4e-177 csbB 2.4.1.83 GT2 M Glycosyltransferase like family 2
PDLKLNFD_00208 1.3e-66
PDLKLNFD_00209 1.1e-76
PDLKLNFD_00210 3.9e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PDLKLNFD_00211 3.7e-87
PDLKLNFD_00212 5.6e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDLKLNFD_00213 2.9e-36 ynzC S UPF0291 protein
PDLKLNFD_00214 4.3e-33 yneF S Uncharacterised protein family (UPF0154)
PDLKLNFD_00215 6.4e-119 plsC 2.3.1.51 I Acyltransferase
PDLKLNFD_00216 2.8e-137 yabB 2.1.1.223 L Methyltransferase small domain
PDLKLNFD_00217 2e-49 yazA L GIY-YIG catalytic domain protein
PDLKLNFD_00218 2.3e-187 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDLKLNFD_00219 4.7e-134 S Haloacid dehalogenase-like hydrolase
PDLKLNFD_00220 6.5e-145 rpsB J Belongs to the universal ribosomal protein uS2 family
PDLKLNFD_00221 1e-151 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDLKLNFD_00222 5e-128 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDLKLNFD_00223 2.5e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDLKLNFD_00224 1.8e-147 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDLKLNFD_00225 8.4e-137 cdsA 2.7.7.41 I Belongs to the CDS family
PDLKLNFD_00226 9.5e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PDLKLNFD_00227 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDLKLNFD_00228 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDLKLNFD_00229 4.2e-83 rimP J Required for maturation of 30S ribosomal subunits
PDLKLNFD_00230 1.3e-216 nusA K Participates in both transcription termination and antitermination
PDLKLNFD_00231 9.5e-49 ylxR K Protein of unknown function (DUF448)
PDLKLNFD_00232 1.1e-47 ylxQ J ribosomal protein
PDLKLNFD_00233 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDLKLNFD_00234 4.6e-50 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDLKLNFD_00235 6.7e-265 ydiN 5.4.99.5 G Major Facilitator
PDLKLNFD_00236 4.6e-216 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDLKLNFD_00237 3.8e-93
PDLKLNFD_00238 1.7e-235 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDLKLNFD_00239 7.2e-195 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PDLKLNFD_00240 3.4e-86 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PDLKLNFD_00241 1.6e-171 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDLKLNFD_00242 2.7e-188 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDLKLNFD_00243 7.3e-132 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PDLKLNFD_00244 2.4e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDLKLNFD_00245 1.5e-80 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDLKLNFD_00246 0.0 dnaK O Heat shock 70 kDa protein
PDLKLNFD_00247 1.2e-184 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDLKLNFD_00248 1.3e-197 pbpX2 V Beta-lactamase
PDLKLNFD_00249 8.8e-19 dltX S D-Ala-teichoic acid biosynthesis protein
PDLKLNFD_00250 7e-297 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDLKLNFD_00251 8.7e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
PDLKLNFD_00252 2.4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDLKLNFD_00253 3e-245 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDLKLNFD_00254 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDLKLNFD_00255 1.2e-48
PDLKLNFD_00256 1.4e-49
PDLKLNFD_00257 3.6e-114 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PDLKLNFD_00258 4.5e-177 prmA J Ribosomal protein L11 methyltransferase
PDLKLNFD_00259 2.9e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDLKLNFD_00260 9.6e-58
PDLKLNFD_00261 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDLKLNFD_00262 8.5e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDLKLNFD_00263 7.9e-114 3.1.3.18 J HAD-hyrolase-like
PDLKLNFD_00264 1.2e-165 yniA G Fructosamine kinase
PDLKLNFD_00265 1.9e-155 lytH 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PDLKLNFD_00266 2.2e-243 hisS 6.1.1.21 J histidyl-tRNA synthetase
PDLKLNFD_00267 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDLKLNFD_00268 9.4e-100 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDLKLNFD_00269 1.7e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDLKLNFD_00270 2.9e-223 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDLKLNFD_00271 4.5e-171 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PDLKLNFD_00272 1.7e-128 C Enoyl-(Acyl carrier protein) reductase
PDLKLNFD_00273 2.1e-151 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PDLKLNFD_00274 9.7e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PDLKLNFD_00275 2.6e-71 yqeY S YqeY-like protein
PDLKLNFD_00276 3.4e-180 phoH T phosphate starvation-inducible protein PhoH
PDLKLNFD_00277 6.6e-84 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDLKLNFD_00278 4.5e-73 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PDLKLNFD_00279 1.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDLKLNFD_00280 3.1e-147 recO L Involved in DNA repair and RecF pathway recombination
PDLKLNFD_00281 6.8e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PDLKLNFD_00282 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PDLKLNFD_00283 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDLKLNFD_00284 4.6e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDLKLNFD_00285 9.5e-65 K helix_turn_helix gluconate operon transcriptional repressor
PDLKLNFD_00286 4.8e-165 ytrB V ABC transporter, ATP-binding protein
PDLKLNFD_00287 9.2e-203
PDLKLNFD_00288 1.1e-197
PDLKLNFD_00289 9.8e-127 S ABC-2 family transporter protein
PDLKLNFD_00290 3.9e-162 V ABC transporter, ATP-binding protein
PDLKLNFD_00291 2.6e-12 yjdF S Protein of unknown function (DUF2992)
PDLKLNFD_00292 1e-114 S Psort location CytoplasmicMembrane, score
PDLKLNFD_00293 1.6e-79 K MarR family
PDLKLNFD_00294 6e-82 K Acetyltransferase (GNAT) domain
PDLKLNFD_00296 5.2e-159 yvfR V ABC transporter
PDLKLNFD_00297 1.1e-133 yvfS V ABC-2 type transporter
PDLKLNFD_00298 2.2e-204 desK 2.7.13.3 T Histidine kinase
PDLKLNFD_00299 1.2e-103 desR K helix_turn_helix, Lux Regulon
PDLKLNFD_00300 3e-270 nox C Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDLKLNFD_00301 2.8e-14 S Alpha beta hydrolase
PDLKLNFD_00302 8.7e-173 C nadph quinone reductase
PDLKLNFD_00303 3.6e-160 K Transcriptional regulator
PDLKLNFD_00304 2.9e-78 S Uncharacterized protein conserved in bacteria (DUF2255)
PDLKLNFD_00305 9e-113 GM NmrA-like family
PDLKLNFD_00306 8.5e-159 S Alpha beta hydrolase
PDLKLNFD_00307 3.4e-129 K Helix-turn-helix domain, rpiR family
PDLKLNFD_00308 1.5e-80 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PDLKLNFD_00309 1.4e-113 ppaX_1 3.1.3.18, 3.6.1.1 S haloacid dehalogenase-like hydrolase
PDLKLNFD_00310 4.7e-28 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_00311 3.4e-72 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKLNFD_00312 1.2e-14 K Bacterial regulatory proteins, tetR family
PDLKLNFD_00313 5.2e-213 S membrane
PDLKLNFD_00314 3.5e-81 K Bacterial regulatory proteins, tetR family
PDLKLNFD_00315 0.0 CP_1020 S Zinc finger, swim domain protein
PDLKLNFD_00316 1.2e-112 GM epimerase
PDLKLNFD_00317 1.4e-68 S Protein of unknown function (DUF1722)
PDLKLNFD_00318 9.1e-71 yneH 1.20.4.1 P ArsC family
PDLKLNFD_00319 9.1e-107 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
PDLKLNFD_00320 1e-136 K DeoR C terminal sensor domain
PDLKLNFD_00321 7.1e-116 naoX P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDLKLNFD_00322 1.2e-183 naoX P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDLKLNFD_00323 1.4e-212 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDLKLNFD_00324 4.3e-77 K Transcriptional regulator
PDLKLNFD_00325 1.3e-241 EGP Major facilitator Superfamily
PDLKLNFD_00326 1.1e-242 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDLKLNFD_00327 1.7e-74 3.6.3.6 P Cation transporter/ATPase, N-terminus
PDLKLNFD_00328 0.0 3.6.3.6 P Cation transporter/ATPase, N-terminus
PDLKLNFD_00329 9.3e-173 C Zinc-binding dehydrogenase
PDLKLNFD_00330 8.5e-220 I transferase activity, transferring acyl groups other than amino-acyl groups
PDLKLNFD_00331 7.8e-208
PDLKLNFD_00332 2.3e-90 yetL K helix_turn_helix multiple antibiotic resistance protein
PDLKLNFD_00333 7.8e-61 P Rhodanese Homology Domain
PDLKLNFD_00334 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PDLKLNFD_00335 3.1e-84 K helix_turn_helix multiple antibiotic resistance protein
PDLKLNFD_00336 3.2e-167 drrA V ABC transporter
PDLKLNFD_00337 5.4e-120 drrB U ABC-2 type transporter
PDLKLNFD_00338 6.9e-223 M O-Antigen ligase
PDLKLNFD_00339 2.3e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
PDLKLNFD_00340 7.2e-197 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDLKLNFD_00341 1.4e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDLKLNFD_00342 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDLKLNFD_00344 5.6e-29 S Protein of unknown function (DUF2929)
PDLKLNFD_00345 0.0 dnaE 2.7.7.7 L DNA polymerase
PDLKLNFD_00346 1.5e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDLKLNFD_00347 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PDLKLNFD_00348 1.5e-74 yeaL S Protein of unknown function (DUF441)
PDLKLNFD_00349 2.9e-170 cvfB S S1 domain
PDLKLNFD_00350 1.1e-164 xerD D recombinase XerD
PDLKLNFD_00351 4.8e-69 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDLKLNFD_00352 8.2e-129 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDLKLNFD_00353 7.9e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDLKLNFD_00354 1.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDLKLNFD_00355 1.1e-96 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDLKLNFD_00356 4.2e-192 ypbB 5.1.3.1 S Helix-turn-helix domain
PDLKLNFD_00357 1.7e-268 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDLKLNFD_00358 2e-19 M Lysin motif
PDLKLNFD_00359 3.8e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PDLKLNFD_00360 1.8e-213 rpsA 1.17.7.4 J Ribosomal protein S1
PDLKLNFD_00361 2.7e-249 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PDLKLNFD_00362 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDLKLNFD_00363 3.3e-215 S Tetratricopeptide repeat protein
PDLKLNFD_00364 2e-149 3.1.3.102, 3.1.3.104 S hydrolase
PDLKLNFD_00365 2.1e-143 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDLKLNFD_00366 3e-226 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDLKLNFD_00367 9.6e-85
PDLKLNFD_00368 0.0 yfmR S ABC transporter, ATP-binding protein
PDLKLNFD_00369 1e-189 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDLKLNFD_00370 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDLKLNFD_00371 5.1e-148 DegV S EDD domain protein, DegV family
PDLKLNFD_00372 2.1e-150 ypmR E GDSL-like Lipase/Acylhydrolase
PDLKLNFD_00373 3.1e-113 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PDLKLNFD_00374 3.4e-35 yozE S Belongs to the UPF0346 family
PDLKLNFD_00375 1.2e-261 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PDLKLNFD_00376 3.3e-251 emrY EGP Major facilitator Superfamily
PDLKLNFD_00377 1.5e-197 XK27_00915 C Luciferase-like monooxygenase
PDLKLNFD_00378 1.3e-125 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PDLKLNFD_00379 8.9e-170 cpsY K Transcriptional regulator, LysR family
PDLKLNFD_00380 1.4e-228 XK27_05470 E Methionine synthase
PDLKLNFD_00382 1.8e-161 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDLKLNFD_00383 9e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDLKLNFD_00384 3.3e-158 dprA LU DNA protecting protein DprA
PDLKLNFD_00385 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDLKLNFD_00386 2.5e-250 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PDLKLNFD_00387 1.5e-177 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PDLKLNFD_00388 6.7e-93 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PDLKLNFD_00389 2.3e-257 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PDLKLNFD_00390 2.2e-170 lacX 5.1.3.3 G Aldose 1-epimerase
PDLKLNFD_00391 5.2e-105 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDLKLNFD_00392 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDLKLNFD_00393 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDLKLNFD_00394 1.2e-177 K Transcriptional regulator
PDLKLNFD_00395 3.7e-168 ppaC 3.6.1.1 C inorganic pyrophosphatase
PDLKLNFD_00396 4e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PDLKLNFD_00397 1e-95 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDLKLNFD_00398 4.2e-32 S YozE SAM-like fold
PDLKLNFD_00399 1.2e-157 xerD L Phage integrase, N-terminal SAM-like domain
PDLKLNFD_00400 4.2e-278 GT89 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDLKLNFD_00401 1.4e-245 M Glycosyl transferase family group 2
PDLKLNFD_00402 8.7e-66
PDLKLNFD_00403 2.7e-252 gshR1 1.8.1.7 C Glutathione reductase
PDLKLNFD_00404 3.9e-75 mgrA K helix_turn_helix multiple antibiotic resistance protein
PDLKLNFD_00405 5.3e-95 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PDLKLNFD_00406 0.0 tarL 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDLKLNFD_00407 6.8e-217 tarK 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDLKLNFD_00408 9.7e-194 tarJ 1.1.1.137, 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
PDLKLNFD_00409 3.3e-118 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
PDLKLNFD_00410 5.1e-227
PDLKLNFD_00411 6.8e-279 lldP C L-lactate permease
PDLKLNFD_00412 1.6e-58
PDLKLNFD_00413 5.6e-121
PDLKLNFD_00414 1e-243 cycA E Amino acid permease
PDLKLNFD_00415 1.2e-133 XK27_00890 S Domain of unknown function (DUF368)
PDLKLNFD_00416 1.5e-128 yejC S Protein of unknown function (DUF1003)
PDLKLNFD_00417 6.2e-51 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
PDLKLNFD_00418 4.6e-12
PDLKLNFD_00419 3.3e-209 pmrB EGP Major facilitator Superfamily
PDLKLNFD_00420 1.4e-147 2.7.7.12 C Domain of unknown function (DUF4931)
PDLKLNFD_00421 1.6e-48
PDLKLNFD_00422 1.7e-09
PDLKLNFD_00423 3.4e-132 S Protein of unknown function (DUF975)
PDLKLNFD_00424 8.3e-78 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
PDLKLNFD_00425 7e-161 degV S EDD domain protein, DegV family
PDLKLNFD_00426 1.9e-66 K Transcriptional regulator
PDLKLNFD_00427 0.0 FbpA K Fibronectin-binding protein
PDLKLNFD_00428 3.5e-132 S ABC-2 family transporter protein
PDLKLNFD_00429 2.4e-164 V ABC transporter, ATP-binding protein
PDLKLNFD_00430 3e-92 3.6.1.55 F NUDIX domain
PDLKLNFD_00432 2.9e-136 S Uncharacterized protein conserved in bacteria (DUF2087)
PDLKLNFD_00433 3.5e-69 S LuxR family transcriptional regulator
PDLKLNFD_00434 1.4e-18 cat 2.3.1.28 V Chloramphenicol acetyltransferase
PDLKLNFD_00435 3.6e-87 cat 2.3.1.28 V Chloramphenicol acetyltransferase
PDLKLNFD_00438 5.8e-70 frataxin S Domain of unknown function (DU1801)
PDLKLNFD_00439 6.4e-113 pgm5 G Phosphoglycerate mutase family
PDLKLNFD_00440 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDLKLNFD_00441 8.1e-207 carA 6.3.5.5 F Belongs to the CarA family
PDLKLNFD_00442 3.3e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDLKLNFD_00443 2e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDLKLNFD_00444 4.4e-74 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDLKLNFD_00445 4.1e-295 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PDLKLNFD_00446 3.3e-62 esbA S Family of unknown function (DUF5322)
PDLKLNFD_00447 2.2e-66 rnhA 3.1.26.4 L Ribonuclease HI
PDLKLNFD_00448 3.2e-211 yurR 1.4.5.1 E FAD dependent oxidoreductase
PDLKLNFD_00449 9.2e-104 S hydrolase activity, acting on ester bonds
PDLKLNFD_00450 5.5e-21 S hydrolase activity, acting on ester bonds
PDLKLNFD_00451 1.1e-192
PDLKLNFD_00452 3.3e-121 3.6.3.35 P ATPases associated with a variety of cellular activities
PDLKLNFD_00453 7.3e-122
PDLKLNFD_00454 1.7e-73 XK27_05710 K Acetyltransferase (GNAT) domain
PDLKLNFD_00455 1.6e-182 mccF 3.4.17.13 V LD-carboxypeptidase
PDLKLNFD_00456 4.5e-239 M hydrolase, family 25
PDLKLNFD_00457 2.8e-47 K Acetyltransferase (GNAT) domain
PDLKLNFD_00458 1.2e-207 mccF V LD-carboxypeptidase
PDLKLNFD_00459 9.2e-200 M Glycosyltransferase, group 2 family protein
PDLKLNFD_00460 4.4e-73 S SnoaL-like domain
PDLKLNFD_00461 2.8e-145 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PDLKLNFD_00462 6.8e-243 P Major Facilitator Superfamily
PDLKLNFD_00463 1.2e-46 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDLKLNFD_00464 4e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PDLKLNFD_00466 3.2e-56 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDLKLNFD_00467 8.3e-110 ypsA S Belongs to the UPF0398 family
PDLKLNFD_00468 7.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDLKLNFD_00469 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PDLKLNFD_00470 1.8e-178 phnT 3.6.3.30 P ATPases associated with a variety of cellular activities
PDLKLNFD_00471 9.3e-181 ftpB P Bacterial extracellular solute-binding protein
PDLKLNFD_00472 1.6e-302 ftpA P Binding-protein-dependent transport system inner membrane component
PDLKLNFD_00473 7.6e-83 uspA T Universal stress protein family
PDLKLNFD_00474 2.7e-157 metQ_4 P Belongs to the nlpA lipoprotein family
PDLKLNFD_00475 7.7e-99 metI P ABC transporter permease
PDLKLNFD_00476 7e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDLKLNFD_00478 1.3e-128 dnaD L Replication initiation and membrane attachment
PDLKLNFD_00479 2.1e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PDLKLNFD_00480 1.1e-225 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PDLKLNFD_00481 2.1e-72 ypmB S protein conserved in bacteria
PDLKLNFD_00482 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PDLKLNFD_00483 4e-170 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PDLKLNFD_00484 7.4e-175 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PDLKLNFD_00485 2.9e-204 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PDLKLNFD_00486 3.6e-196 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDLKLNFD_00487 2.5e-194 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDLKLNFD_00488 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PDLKLNFD_00489 9.6e-250 malT G Major Facilitator
PDLKLNFD_00490 2.1e-88 S Domain of unknown function (DUF4767)
PDLKLNFD_00491 9.4e-269 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PDLKLNFD_00492 1.2e-149 yitU 3.1.3.104 S hydrolase
PDLKLNFD_00493 1.4e-265 yfnA E Amino Acid
PDLKLNFD_00494 7.4e-258 gabT 2.6.1.19, 5.1.1.21 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDLKLNFD_00495 4.2e-43
PDLKLNFD_00496 3.9e-50
PDLKLNFD_00497 1.4e-136 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 U Ion channel
PDLKLNFD_00498 1e-170 2.5.1.74 H UbiA prenyltransferase family
PDLKLNFD_00499 5.7e-255 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDLKLNFD_00500 5.1e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PDLKLNFD_00501 7.3e-280 pipD E Dipeptidase
PDLKLNFD_00502 9.4e-40
PDLKLNFD_00503 4.8e-29 S CsbD-like
PDLKLNFD_00504 6.5e-41 S transglycosylase associated protein
PDLKLNFD_00505 3.1e-14
PDLKLNFD_00506 3.5e-36
PDLKLNFD_00507 1.8e-164 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
PDLKLNFD_00508 8e-66 S Protein of unknown function (DUF805)
PDLKLNFD_00509 1.4e-75 uspA T Belongs to the universal stress protein A family
PDLKLNFD_00510 4.3e-67 tspO T TspO/MBR family
PDLKLNFD_00511 7.9e-41
PDLKLNFD_00512 5.8e-48 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
PDLKLNFD_00513 4.5e-114 1.14.99.53 AA10 S Lytic polysaccharide mono-oxygenase, cellulose-degrading
PDLKLNFD_00514 2.5e-209 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PDLKLNFD_00515 1.3e-28
PDLKLNFD_00516 8.5e-54
PDLKLNFD_00517 8.4e-14 K Bacterial regulatory proteins, tetR family
PDLKLNFD_00518 4.7e-85 S Protein of unknown function with HXXEE motif
PDLKLNFD_00519 1.2e-139 f42a O Band 7 protein
PDLKLNFD_00520 5.2e-301 norB EGP Major Facilitator
PDLKLNFD_00521 6.2e-94 K transcriptional regulator
PDLKLNFD_00522 1.5e-192 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDLKLNFD_00523 1.7e-87 ykhA 3.1.2.20 I Thioesterase superfamily
PDLKLNFD_00524 2e-158 K LysR substrate binding domain
PDLKLNFD_00525 3.7e-123 S Protein of unknown function (DUF554)
PDLKLNFD_00526 2.4e-98 2.7.8.7 H Belongs to the P-Pant transferase superfamily
PDLKLNFD_00527 2.9e-134 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PDLKLNFD_00528 8.8e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PDLKLNFD_00529 3e-156 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDLKLNFD_00530 2.1e-260 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PDLKLNFD_00531 1.2e-70 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PDLKLNFD_00532 5.9e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDLKLNFD_00533 9.5e-228 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDLKLNFD_00534 1.2e-126 IQ reductase
PDLKLNFD_00535 3.1e-170 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PDLKLNFD_00536 1.3e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDLKLNFD_00537 2.6e-180 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDLKLNFD_00538 2.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDLKLNFD_00539 1.5e-178 yneE K Transcriptional regulator
PDLKLNFD_00540 3e-145 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKLNFD_00541 8.5e-60 S Protein of unknown function (DUF1648)
PDLKLNFD_00542 1.2e-199 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PDLKLNFD_00543 1.3e-215 3.5.1.47 E Peptidase family M20/M25/M40
PDLKLNFD_00544 2.4e-218 E glutamate:sodium symporter activity
PDLKLNFD_00545 1.6e-67 ybbJ K Acetyltransferase (GNAT) family
PDLKLNFD_00546 2.6e-177 1.6.5.5 C Zinc-binding dehydrogenase
PDLKLNFD_00547 2e-97 entB 3.5.1.19 Q Isochorismatase family
PDLKLNFD_00548 1.5e-141 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDLKLNFD_00549 6.6e-226 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDLKLNFD_00550 5.5e-107 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PDLKLNFD_00551 2.4e-123 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PDLKLNFD_00552 2.7e-167 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDLKLNFD_00553 1.5e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH Peptidase C26
PDLKLNFD_00554 1.7e-268 trpE 4.1.3.27 EH Anthranilate synthase component I, N terminal region
PDLKLNFD_00556 1.8e-271 XK27_00765
PDLKLNFD_00557 2.3e-139 ecsA_2 V AAA domain, putative AbiEii toxin, Type IV TA system
PDLKLNFD_00558 5.3e-86
PDLKLNFD_00559 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
PDLKLNFD_00560 6.8e-53
PDLKLNFD_00561 1.9e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDLKLNFD_00562 3.4e-140 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDLKLNFD_00563 8.2e-96 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDLKLNFD_00564 2.6e-39 ylqC S Belongs to the UPF0109 family
PDLKLNFD_00565 2.9e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDLKLNFD_00566 2.9e-220 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDLKLNFD_00567 2.6e-58 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDLKLNFD_00568 5.6e-169 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDLKLNFD_00569 0.0 smc D Required for chromosome condensation and partitioning
PDLKLNFD_00570 5.7e-129 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDLKLNFD_00571 1.7e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDLKLNFD_00572 5.1e-190 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDLKLNFD_00573 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDLKLNFD_00574 0.0 yloV S DAK2 domain fusion protein YloV
PDLKLNFD_00575 1.8e-57 asp S Asp23 family, cell envelope-related function
PDLKLNFD_00576 4.9e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PDLKLNFD_00577 3.4e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
PDLKLNFD_00578 3.3e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PDLKLNFD_00579 3.2e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDLKLNFD_00580 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PDLKLNFD_00581 1.7e-134 stp 3.1.3.16 T phosphatase
PDLKLNFD_00582 3e-251 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDLKLNFD_00583 4.2e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDLKLNFD_00584 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDLKLNFD_00585 3.4e-217 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDLKLNFD_00586 2.4e-30 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDLKLNFD_00587 3.3e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PDLKLNFD_00588 3.6e-55
PDLKLNFD_00589 4.9e-106 opuCD P Binding-protein-dependent transport system inner membrane component
PDLKLNFD_00590 6e-174 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PDLKLNFD_00591 1.2e-104 opuCB E ABC transporter permease
PDLKLNFD_00592 5.7e-222 opuCA 3.6.3.32 E ABC transporter, ATP-binding protein
PDLKLNFD_00593 4.4e-308 recN L May be involved in recombinational repair of damaged DNA
PDLKLNFD_00594 7.4e-77 argR K Regulates arginine biosynthesis genes
PDLKLNFD_00595 4e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDLKLNFD_00596 1.5e-158 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDLKLNFD_00597 4.3e-33 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDLKLNFD_00598 9.3e-245 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDLKLNFD_00599 8.5e-151 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDLKLNFD_00600 5.2e-69 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDLKLNFD_00601 3.5e-74 yqhY S Asp23 family, cell envelope-related function
PDLKLNFD_00602 2.2e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDLKLNFD_00603 2.1e-191 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDLKLNFD_00604 5.4e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PDLKLNFD_00605 3.2e-53 ysxB J Cysteine protease Prp
PDLKLNFD_00606 7.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDLKLNFD_00607 1.8e-89 K Transcriptional regulator
PDLKLNFD_00608 5.4e-19
PDLKLNFD_00612 1.7e-30
PDLKLNFD_00613 5.3e-56
PDLKLNFD_00614 6.2e-99 dut S Protein conserved in bacteria
PDLKLNFD_00615 4e-181
PDLKLNFD_00616 2.5e-161
PDLKLNFD_00617 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
PDLKLNFD_00618 4.6e-64 glnR K Transcriptional regulator
PDLKLNFD_00619 2.4e-175 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDLKLNFD_00620 1.7e-139 glpQ 3.1.4.46 C phosphodiesterase
PDLKLNFD_00621 6.9e-23 WQ51_02665 S Protein of unknown function (DUF3042)
PDLKLNFD_00622 4.4e-68 yqhL P Rhodanese-like protein
PDLKLNFD_00623 2.1e-109 pepE 3.4.13.21 E Belongs to the peptidase S51 family
PDLKLNFD_00624 5.7e-180 glk 2.7.1.2 G Glucokinase
PDLKLNFD_00625 1.4e-33 yqgQ S Bacterial protein of unknown function (DUF910)
PDLKLNFD_00626 1.3e-114 gluP 3.4.21.105 S Peptidase, S54 family
PDLKLNFD_00627 6.3e-102 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDLKLNFD_00628 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDLKLNFD_00629 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PDLKLNFD_00630 0.0 S membrane
PDLKLNFD_00631 3.8e-53 yneR S Belongs to the HesB IscA family
PDLKLNFD_00632 3.4e-74 XK27_02470 K LytTr DNA-binding domain
PDLKLNFD_00633 7.3e-95 liaI S membrane
PDLKLNFD_00634 6.8e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDLKLNFD_00635 2.6e-112 udk 2.7.1.48 F Cytidine monophosphokinase
PDLKLNFD_00636 6.6e-186 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDLKLNFD_00637 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDLKLNFD_00638 4.9e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDLKLNFD_00639 7.4e-64 yodB K Transcriptional regulator, HxlR family
PDLKLNFD_00640 3.7e-93 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDLKLNFD_00641 7.9e-140 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDLKLNFD_00642 6.4e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PDLKLNFD_00643 1e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDLKLNFD_00644 8.4e-94 S SdpI/YhfL protein family
PDLKLNFD_00645 4.5e-227 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDLKLNFD_00646 0.0 sbcC L Putative exonuclease SbcCD, C subunit
PDLKLNFD_00647 3.8e-171 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PDLKLNFD_00648 6.3e-304 arlS 2.7.13.3 T Histidine kinase
PDLKLNFD_00649 4.3e-121 K response regulator
PDLKLNFD_00650 5.5e-245 rarA L recombination factor protein RarA
PDLKLNFD_00651 1e-273 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDLKLNFD_00652 6.4e-171 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDLKLNFD_00653 6.7e-40 S Peptidase propeptide and YPEB domain
PDLKLNFD_00654 1e-34 S Peptidase propeptide and YPEB domain
PDLKLNFD_00655 1.6e-97 yceD S Uncharacterized ACR, COG1399
PDLKLNFD_00656 3.3e-214 ylbM S Belongs to the UPF0348 family
PDLKLNFD_00657 1.7e-139 yqeM Q Methyltransferase
PDLKLNFD_00658 2.1e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDLKLNFD_00659 3.2e-115 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PDLKLNFD_00660 1.4e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDLKLNFD_00661 1.1e-50 yhbY J RNA-binding protein
PDLKLNFD_00662 4.5e-216 yqeH S Ribosome biogenesis GTPase YqeH
PDLKLNFD_00663 4e-98 yqeG S HAD phosphatase, family IIIA
PDLKLNFD_00664 1.3e-79
PDLKLNFD_00665 8.8e-248 pgaC GT2 M Glycosyl transferase
PDLKLNFD_00666 1.5e-135 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
PDLKLNFD_00667 2.3e-62 hxlR K Transcriptional regulator, HxlR family
PDLKLNFD_00668 7.2e-197 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PDLKLNFD_00669 2.5e-239 yrvN L AAA C-terminal domain
PDLKLNFD_00670 1.1e-55
PDLKLNFD_00671 7.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDLKLNFD_00672 1.9e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PDLKLNFD_00673 1.8e-84 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDLKLNFD_00674 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDLKLNFD_00675 3.3e-172 dnaI L Primosomal protein DnaI
PDLKLNFD_00676 1.8e-246 dnaB L replication initiation and membrane attachment
PDLKLNFD_00677 4.6e-91 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDLKLNFD_00678 2.7e-103 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDLKLNFD_00679 1.5e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDLKLNFD_00680 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDLKLNFD_00681 4.5e-121 ybhL S Belongs to the BI1 family
PDLKLNFD_00682 8.9e-111 hipB K Helix-turn-helix
PDLKLNFD_00683 5.5e-45 yitW S Iron-sulfur cluster assembly protein
PDLKLNFD_00684 7.2e-272 sufB O assembly protein SufB
PDLKLNFD_00685 7.1e-83 nifU C SUF system FeS assembly protein, NifU family
PDLKLNFD_00686 8e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDLKLNFD_00687 1.3e-243 sufD O FeS assembly protein SufD
PDLKLNFD_00688 4.2e-144 sufC O FeS assembly ATPase SufC
PDLKLNFD_00689 1.3e-34 feoA P FeoA domain
PDLKLNFD_00690 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PDLKLNFD_00691 7.9e-21 S Virus attachment protein p12 family
PDLKLNFD_00692 1.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PDLKLNFD_00693 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PDLKLNFD_00694 5.3e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDLKLNFD_00695 1.6e-54 ytzB S Peptidase propeptide and YPEB domain
PDLKLNFD_00696 1.7e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDLKLNFD_00697 3.2e-152 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PDLKLNFD_00698 4.8e-224 ecsB U ABC transporter
PDLKLNFD_00699 1.6e-134 ecsA V ABC transporter, ATP-binding protein
PDLKLNFD_00700 9.9e-82 hit FG histidine triad
PDLKLNFD_00701 3.5e-39
PDLKLNFD_00702 3.3e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDLKLNFD_00703 3.5e-78 S WxL domain surface cell wall-binding
PDLKLNFD_00704 4e-103 S WxL domain surface cell wall-binding
PDLKLNFD_00705 1.4e-192 S Fn3-like domain
PDLKLNFD_00706 7.9e-61
PDLKLNFD_00707 0.0
PDLKLNFD_00708 3.6e-241 npr 1.11.1.1 C NADH oxidase
PDLKLNFD_00709 3.3e-112 K Bacterial regulatory proteins, tetR family
PDLKLNFD_00710 5.1e-116 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PDLKLNFD_00711 1.4e-106
PDLKLNFD_00712 9.3e-106 GBS0088 S Nucleotidyltransferase
PDLKLNFD_00713 1.4e-81 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PDLKLNFD_00714 3.1e-223 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PDLKLNFD_00715 1.8e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PDLKLNFD_00716 1.1e-171 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PDLKLNFD_00717 0.0 S membrane
PDLKLNFD_00718 3.9e-69 S NUDIX domain
PDLKLNFD_00719 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDLKLNFD_00720 1.8e-184 ykoT GT2 M Glycosyl transferase family 2
PDLKLNFD_00721 1.3e-79 dedA S SNARE-like domain protein
PDLKLNFD_00722 2.6e-132 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PDLKLNFD_00723 2.2e-61 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatase
PDLKLNFD_00724 4.8e-104 K Transcriptional regulatory protein, C terminal
PDLKLNFD_00725 1.9e-160 T PhoQ Sensor
PDLKLNFD_00726 6e-76 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PDLKLNFD_00727 4.2e-98
PDLKLNFD_00728 0.0 1.3.5.4 C FAD binding domain
PDLKLNFD_00729 2.1e-111 1.3.5.4 S NADPH-dependent FMN reductase
PDLKLNFD_00730 1.2e-177 K LysR substrate binding domain
PDLKLNFD_00731 5.2e-181 3.4.21.102 M Peptidase family S41
PDLKLNFD_00732 8.7e-215
PDLKLNFD_00733 2.9e-187 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDLKLNFD_00734 0.0 L AAA domain
PDLKLNFD_00735 5.7e-233 yhaO L Ser Thr phosphatase family protein
PDLKLNFD_00736 1e-54 yheA S Belongs to the UPF0342 family
PDLKLNFD_00737 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDLKLNFD_00738 2.9e-12
PDLKLNFD_00739 4.4e-77 argR K Regulates arginine biosynthesis genes
PDLKLNFD_00740 3.2e-214 arcT 2.6.1.1 E Aminotransferase
PDLKLNFD_00741 5.2e-102 argO S LysE type translocator
PDLKLNFD_00742 8.4e-284 ydfD K Alanine-glyoxylate amino-transferase
PDLKLNFD_00743 4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDLKLNFD_00744 2e-114 M ErfK YbiS YcfS YnhG
PDLKLNFD_00745 1.2e-198 EGP Major facilitator Superfamily
PDLKLNFD_00746 1.5e-288 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKLNFD_00747 1.6e-244 pts15C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_00748 1.1e-47 pts15B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PDLKLNFD_00749 1.4e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PDLKLNFD_00750 5.9e-61 S Domain of unknown function (DUF3284)
PDLKLNFD_00751 0.0 K PRD domain
PDLKLNFD_00752 7.6e-107
PDLKLNFD_00753 0.0 yhcA V MacB-like periplasmic core domain
PDLKLNFD_00754 1.4e-81
PDLKLNFD_00755 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PDLKLNFD_00756 7.7e-79 elaA S Acetyltransferase (GNAT) domain
PDLKLNFD_00759 1.9e-31
PDLKLNFD_00760 2.1e-244 dinF V MatE
PDLKLNFD_00761 0.0 yfbS P Sodium:sulfate symporter transmembrane region
PDLKLNFD_00762 3.9e-304 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
PDLKLNFD_00763 1.5e-175 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain
PDLKLNFD_00764 2.5e-112 cysC 2.7.1.25, 2.7.7.4 F Catalyzes the synthesis of activated sulfate
PDLKLNFD_00765 1.3e-229 sat 2.7.7.4 H the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
PDLKLNFD_00766 6.1e-307 S Protein conserved in bacteria
PDLKLNFD_00767 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PDLKLNFD_00768 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PDLKLNFD_00769 3.6e-58 S Protein of unknown function (DUF1516)
PDLKLNFD_00770 1.9e-89 gtcA S Teichoic acid glycosylation protein
PDLKLNFD_00771 2.1e-180
PDLKLNFD_00772 3.5e-10
PDLKLNFD_00773 1.1e-53
PDLKLNFD_00776 0.0 uvrA2 L ABC transporter
PDLKLNFD_00777 2.5e-46
PDLKLNFD_00778 1e-90
PDLKLNFD_00779 5.9e-85 ohrR K helix_turn_helix multiple antibiotic resistance protein
PDLKLNFD_00780 5.1e-114 S CAAX protease self-immunity
PDLKLNFD_00781 2.5e-59
PDLKLNFD_00782 4.5e-55
PDLKLNFD_00783 1.6e-137 pltR K LytTr DNA-binding domain
PDLKLNFD_00784 8.2e-216 pltK 2.7.13.3 T GHKL domain
PDLKLNFD_00785 1.7e-108
PDLKLNFD_00786 6.5e-148 S Sucrose-6F-phosphate phosphohydrolase
PDLKLNFD_00787 1e-157 ypaH EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PDLKLNFD_00788 5.1e-116 GM NAD(P)H-binding
PDLKLNFD_00789 3.6e-64 K helix_turn_helix, mercury resistance
PDLKLNFD_00790 7.7e-154 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDLKLNFD_00792 5.7e-175 K LytTr DNA-binding domain
PDLKLNFD_00793 1.5e-155 V ABC transporter
PDLKLNFD_00794 8.2e-126 V Transport permease protein
PDLKLNFD_00796 4.6e-180 XK27_06930 V domain protein
PDLKLNFD_00797 5.5e-41 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDLKLNFD_00798 3.8e-119 dck 2.7.1.74 F deoxynucleoside kinase
PDLKLNFD_00799 9.9e-126 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PDLKLNFD_00800 4.2e-261 ugpB G Bacterial extracellular solute-binding protein
PDLKLNFD_00801 1.1e-150 ugpE G ABC transporter permease
PDLKLNFD_00802 6.8e-173 ugpA U Binding-protein-dependent transport system inner membrane component
PDLKLNFD_00803 6.1e-202 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
PDLKLNFD_00804 4.1e-84 uspA T Belongs to the universal stress protein A family
PDLKLNFD_00805 1.1e-272 pepV 3.5.1.18 E dipeptidase PepV
PDLKLNFD_00806 1.7e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDLKLNFD_00807 1.8e-136 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDLKLNFD_00808 3e-301 ytgP S Polysaccharide biosynthesis protein
PDLKLNFD_00809 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDLKLNFD_00810 1e-124 3.6.1.27 I Acid phosphatase homologues
PDLKLNFD_00811 2e-106 ytqB 2.1.1.176 J Putative rRNA methylase
PDLKLNFD_00812 4.2e-29
PDLKLNFD_00813 7.5e-299 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
PDLKLNFD_00814 5.1e-268 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
PDLKLNFD_00815 0.0 S Pfam Methyltransferase
PDLKLNFD_00816 1.7e-146 N Cell shape-determining protein MreB
PDLKLNFD_00817 1.4e-278 bmr3 EGP Major facilitator Superfamily
PDLKLNFD_00818 4.1e-212 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDLKLNFD_00819 3.1e-122
PDLKLNFD_00820 7e-40
PDLKLNFD_00822 8.6e-249 EGP Major facilitator Superfamily
PDLKLNFD_00823 2e-169 znuA P Belongs to the bacterial solute-binding protein 9 family
PDLKLNFD_00824 4.7e-83 cvpA S Colicin V production protein
PDLKLNFD_00825 2.2e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDLKLNFD_00826 1.1e-92 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PDLKLNFD_00827 2.6e-103 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
PDLKLNFD_00828 1.8e-248 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDLKLNFD_00829 2.7e-103 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
PDLKLNFD_00830 6.1e-213 folP 2.5.1.15 H dihydropteroate synthase
PDLKLNFD_00831 2.5e-95 tag 3.2.2.20 L glycosylase
PDLKLNFD_00832 2.6e-19
PDLKLNFD_00834 7.8e-103 K Helix-turn-helix XRE-family like proteins
PDLKLNFD_00835 2.7e-160 czcD P cation diffusion facilitator family transporter
PDLKLNFD_00836 5.1e-54 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PDLKLNFD_00837 3e-116 hly S protein, hemolysin III
PDLKLNFD_00838 1.5e-44 qacH U Small Multidrug Resistance protein
PDLKLNFD_00839 4.4e-59 qacC P Small Multidrug Resistance protein
PDLKLNFD_00840 1.5e-216 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
PDLKLNFD_00841 4e-179 K AI-2E family transporter
PDLKLNFD_00842 4.6e-166 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDLKLNFD_00843 0.0 kup P Transport of potassium into the cell
PDLKLNFD_00845 2.3e-257 yhdG E C-terminus of AA_permease
PDLKLNFD_00846 4.3e-83
PDLKLNFD_00847 6.2e-60 S Protein of unknown function (DUF1211)
PDLKLNFD_00848 1e-140 XK27_06930 S ABC-2 family transporter protein
PDLKLNFD_00849 1.3e-64 K Bacterial regulatory proteins, tetR family
PDLKLNFD_00851 4.8e-279 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDLKLNFD_00852 4.4e-146 ptp2 3.1.3.48 T Tyrosine phosphatase family
PDLKLNFD_00853 1.3e-184 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDLKLNFD_00854 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDLKLNFD_00855 7.4e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDLKLNFD_00856 4.9e-54 S Enterocin A Immunity
PDLKLNFD_00857 3.6e-257 gor 1.8.1.7 C Glutathione reductase
PDLKLNFD_00858 8.3e-199 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDLKLNFD_00859 1.1e-183 D Alpha beta
PDLKLNFD_00860 5.3e-164 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I Squalene/phytoene synthase
PDLKLNFD_00861 1.6e-293 crtI 1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31 Q Flavin containing amine oxidoreductase
PDLKLNFD_00862 3.5e-118 yugP S Putative neutral zinc metallopeptidase
PDLKLNFD_00863 4.1e-25
PDLKLNFD_00864 2.5e-145 DegV S EDD domain protein, DegV family
PDLKLNFD_00865 7.3e-127 lrgB M LrgB-like family
PDLKLNFD_00866 5.1e-64 lrgA S LrgA family
PDLKLNFD_00867 3.8e-104 J Acetyltransferase (GNAT) domain
PDLKLNFD_00868 6.9e-169 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 S Calcineurin-like phosphoesterase
PDLKLNFD_00869 1.3e-34 S Phospholipase_D-nuclease N-terminal
PDLKLNFD_00870 2.1e-58 S Enterocin A Immunity
PDLKLNFD_00871 9.8e-88 perR P Belongs to the Fur family
PDLKLNFD_00872 2.5e-104
PDLKLNFD_00873 7.9e-238 S module of peptide synthetase
PDLKLNFD_00874 2e-100 S NADPH-dependent FMN reductase
PDLKLNFD_00875 1.4e-08
PDLKLNFD_00876 3.9e-127 magIII L Base excision DNA repair protein, HhH-GPD family
PDLKLNFD_00877 1.5e-303 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDLKLNFD_00878 3e-37 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDLKLNFD_00879 1.3e-154 1.6.5.2 GM NmrA-like family
PDLKLNFD_00880 2e-77 merR K MerR family regulatory protein
PDLKLNFD_00881 2.2e-90 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDLKLNFD_00882 1.7e-20 fryA 2.7.1.202 G COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PDLKLNFD_00883 2.4e-26 mngA 2.7.1.195, 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PDLKLNFD_00884 6.3e-122 mngA 2.7.1.195, 2.7.1.202 U Phosphotransferase system, EIIC
PDLKLNFD_00885 2e-307 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PDLKLNFD_00886 1.1e-92 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PDLKLNFD_00887 1.7e-148 cof S haloacid dehalogenase-like hydrolase
PDLKLNFD_00888 2.2e-151 qorB 1.6.5.2 GM NmrA-like family
PDLKLNFD_00889 9.4e-77
PDLKLNFD_00890 2.1e-274 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDLKLNFD_00891 6.1e-117 ybbL S ABC transporter, ATP-binding protein
PDLKLNFD_00892 6.8e-128 ybbM S Uncharacterised protein family (UPF0014)
PDLKLNFD_00893 2.6e-205 S DUF218 domain
PDLKLNFD_00894 3.7e-182 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PDLKLNFD_00895 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PDLKLNFD_00896 0.0 scrA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDLKLNFD_00897 5e-128 S Putative adhesin
PDLKLNFD_00898 5.1e-84 XK27_06920 S Protein of unknown function (DUF1700)
PDLKLNFD_00899 6.8e-53 K Transcriptional regulator
PDLKLNFD_00900 2.9e-78 KT response to antibiotic
PDLKLNFD_00901 1.5e-120 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PDLKLNFD_00902 3.6e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDLKLNFD_00903 2.4e-122 tcyB E ABC transporter
PDLKLNFD_00904 6.8e-126 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PDLKLNFD_00905 3e-234 EK Aminotransferase, class I
PDLKLNFD_00906 6.1e-168 K LysR substrate binding domain
PDLKLNFD_00907 1.6e-146 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKLNFD_00908 0.0 S Bacterial membrane protein YfhO
PDLKLNFD_00909 4.1e-226 nupG F Nucleoside
PDLKLNFD_00910 2.7e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PDLKLNFD_00911 2.7e-149 noc K Belongs to the ParB family
PDLKLNFD_00912 1.8e-136 soj D Sporulation initiation inhibitor
PDLKLNFD_00913 4.8e-157 spo0J K Belongs to the ParB family
PDLKLNFD_00914 9.8e-31 yyzM S Bacterial protein of unknown function (DUF951)
PDLKLNFD_00915 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDLKLNFD_00916 5.2e-125 XK27_01040 S Protein of unknown function (DUF1129)
PDLKLNFD_00917 2.3e-212 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDLKLNFD_00918 1.7e-160 prsA 3.1.3.16, 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDLKLNFD_00919 5.5e-124 yoaK S Protein of unknown function (DUF1275)
PDLKLNFD_00920 3.2e-124 K response regulator
PDLKLNFD_00921 1.3e-213 hpk31 2.7.13.3 T Histidine kinase
PDLKLNFD_00922 7.1e-237 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDLKLNFD_00923 1.3e-90 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PDLKLNFD_00924 5.1e-131 azlC E branched-chain amino acid
PDLKLNFD_00925 2.3e-54 azlD S branched-chain amino acid
PDLKLNFD_00926 8e-110 S membrane transporter protein
PDLKLNFD_00927 4.1e-54
PDLKLNFD_00929 4.3e-74 S Psort location Cytoplasmic, score
PDLKLNFD_00930 1.7e-96 S Domain of unknown function (DUF4352)
PDLKLNFD_00931 2.9e-23 S Protein of unknown function (DUF4064)
PDLKLNFD_00932 5e-201 KLT Protein tyrosine kinase
PDLKLNFD_00933 3.6e-163
PDLKLNFD_00934 9.5e-233 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PDLKLNFD_00935 2.4e-83
PDLKLNFD_00936 1.7e-210 xylR GK ROK family
PDLKLNFD_00937 4.9e-172 K AI-2E family transporter
PDLKLNFD_00938 7.9e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDLKLNFD_00939 2.3e-120 Q Methyltransferase domain
PDLKLNFD_00940 4.4e-39
PDLKLNFD_00941 2.3e-64 yobT S PFAM Metallo-beta-lactamase superfamily
PDLKLNFD_00942 8.1e-12 S Domain of unknown function (DUF4260)
PDLKLNFD_00943 2.2e-109 XK27_06930 S ABC-2 family transporter protein
PDLKLNFD_00944 1.3e-36 K Bacterial regulatory proteins, tetR family
PDLKLNFD_00945 5.4e-53 ydeA S intracellular protease amidase
PDLKLNFD_00946 0.0 L Transposase
PDLKLNFD_00947 6.8e-53
PDLKLNFD_00948 3e-40
PDLKLNFD_00949 2.5e-52 S Uncharacterized protein conserved in bacteria (DUF2316)
PDLKLNFD_00950 5.3e-160 4.1.1.46 S Amidohydrolase
PDLKLNFD_00951 6.7e-99 K transcriptional regulator
PDLKLNFD_00952 2.5e-183 yfeX P Peroxidase
PDLKLNFD_00953 1.3e-136 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PDLKLNFD_00954 2.4e-127 ydcF S Gram-negative-bacterium-type cell wall biogenesis
PDLKLNFD_00955 4.3e-183 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
PDLKLNFD_00956 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PDLKLNFD_00957 6.3e-142 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDLKLNFD_00958 9.5e-55 txlA O Thioredoxin-like domain
PDLKLNFD_00959 5.6e-40 yrkD S Metal-sensitive transcriptional repressor
PDLKLNFD_00960 1.6e-18
PDLKLNFD_00961 1.2e-94 dps P Belongs to the Dps family
PDLKLNFD_00962 1.6e-32 copZ P Heavy-metal-associated domain
PDLKLNFD_00963 3.3e-118 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PDLKLNFD_00964 0.0 pepO 3.4.24.71 O Peptidase family M13
PDLKLNFD_00965 1.9e-83 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDLKLNFD_00966 6.5e-262 nox C NADH oxidase
PDLKLNFD_00967 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PDLKLNFD_00968 6.1e-164 S Cell surface protein
PDLKLNFD_00969 1.5e-118 S WxL domain surface cell wall-binding
PDLKLNFD_00970 2.3e-99 S WxL domain surface cell wall-binding
PDLKLNFD_00971 4.6e-45
PDLKLNFD_00972 5.4e-104 K Bacterial regulatory proteins, tetR family
PDLKLNFD_00973 1.5e-49
PDLKLNFD_00974 1.8e-248 S Putative metallopeptidase domain
PDLKLNFD_00975 2.4e-220 3.1.3.1 S associated with various cellular activities
PDLKLNFD_00976 8.8e-108 aqpZ U Belongs to the MIP aquaporin (TC 1.A.8) family
PDLKLNFD_00977 0.0 ubiB S ABC1 family
PDLKLNFD_00978 1.3e-249 brnQ U Component of the transport system for branched-chain amino acids
PDLKLNFD_00979 0.0 lacS G Transporter
PDLKLNFD_00980 0.0 lacA 3.2.1.23 G -beta-galactosidase
PDLKLNFD_00981 1.8e-187 lacR K Transcriptional regulator
PDLKLNFD_00982 0.0 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PDLKLNFD_00983 6.8e-229 mdtH P Sugar (and other) transporter
PDLKLNFD_00984 2.7e-304 ram2 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PDLKLNFD_00985 8.6e-232 EGP Major facilitator Superfamily
PDLKLNFD_00986 7.4e-183 rhaR K helix_turn_helix, arabinose operon control protein
PDLKLNFD_00987 3.5e-111 fic D Fic/DOC family
PDLKLNFD_00988 1.6e-76 K Helix-turn-helix XRE-family like proteins
PDLKLNFD_00989 2e-183 galR K Transcriptional regulator
PDLKLNFD_00990 3.8e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PDLKLNFD_00991 3.4e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDLKLNFD_00992 2.1e-224 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDLKLNFD_00993 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PDLKLNFD_00994 8.3e-187 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PDLKLNFD_00995 0.0 rafA 3.2.1.22 G alpha-galactosidase
PDLKLNFD_00996 0.0 lacS G Transporter
PDLKLNFD_00997 7.7e-199 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDLKLNFD_00998 1.1e-173 galR K Transcriptional regulator
PDLKLNFD_00999 1.7e-193 C Aldo keto reductase family protein
PDLKLNFD_01000 2.4e-65 S pyridoxamine 5-phosphate
PDLKLNFD_01001 0.0 1.3.5.4 C FAD binding domain
PDLKLNFD_01002 4.8e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDLKLNFD_01003 9.3e-133 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PDLKLNFD_01004 2.5e-166 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDLKLNFD_01005 9.2e-175 K Transcriptional regulator, LysR family
PDLKLNFD_01006 1.2e-219 ydiN EGP Major Facilitator Superfamily
PDLKLNFD_01007 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDLKLNFD_01008 9.4e-161 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDLKLNFD_01009 1e-156 IQ Enoyl-(Acyl carrier protein) reductase
PDLKLNFD_01010 2.1e-165 G Xylose isomerase-like TIM barrel
PDLKLNFD_01011 4.7e-168 K Transcriptional regulator, LysR family
PDLKLNFD_01012 1.2e-201 EGP Major Facilitator Superfamily
PDLKLNFD_01013 7.6e-64
PDLKLNFD_01014 9.9e-154 estA S Putative esterase
PDLKLNFD_01015 1.2e-134 K UTRA domain
PDLKLNFD_01016 3.6e-249 pts29C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_01017 1.1e-162 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PDLKLNFD_01018 2.2e-157 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PDLKLNFD_01019 1.1e-211 S Bacterial protein of unknown function (DUF871)
PDLKLNFD_01020 1.4e-291 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKLNFD_01021 0.0 pts30BCA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDLKLNFD_01022 1.8e-153 licT K CAT RNA binding domain
PDLKLNFD_01023 3.4e-293 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKLNFD_01024 7.2e-291 pbg10 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKLNFD_01025 0.0 bglP 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDLKLNFD_01026 4.9e-159 licT K CAT RNA binding domain
PDLKLNFD_01027 0.0 treP 2.4.1.64 GH65 G hydrolase, family 65, central catalytic
PDLKLNFD_01028 1.1e-173 K Transcriptional regulator, LacI family
PDLKLNFD_01029 6.1e-271 G Major Facilitator
PDLKLNFD_01030 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PDLKLNFD_01032 9.9e-188 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDLKLNFD_01033 7.3e-144 yxeH S hydrolase
PDLKLNFD_01034 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDLKLNFD_01035 1.8e-113 tal 2.2.1.2 F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PDLKLNFD_01036 3.7e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PDLKLNFD_01037 2.2e-45 ulaB 2.7.1.194, 2.7.1.200 G Phosphotransferase system galactitol-specific IIB component
PDLKLNFD_01038 2e-77 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDLKLNFD_01039 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDLKLNFD_01040 1.3e-113 gph 3.1.3.18 S Haloacid dehalogenase-like hydrolase
PDLKLNFD_01041 3e-188 gutB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PDLKLNFD_01042 1.1e-231 gatC G PTS system sugar-specific permease component
PDLKLNFD_01043 1.1e-44 2.7.1.194, 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PDLKLNFD_01044 1.5e-80 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDLKLNFD_01045 5.2e-123 K DeoR C terminal sensor domain
PDLKLNFD_01046 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDLKLNFD_01047 2.6e-70 yueI S Protein of unknown function (DUF1694)
PDLKLNFD_01048 9.6e-103 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PDLKLNFD_01049 7.8e-266 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PDLKLNFD_01050 1e-136 araD 4.1.2.17, 4.1.2.19, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PDLKLNFD_01051 1.7e-306 araB 2.7.1.12, 2.7.1.16, 2.7.1.5 G carbohydrate kinase FGGY
PDLKLNFD_01052 1.6e-255 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDLKLNFD_01053 3.1e-206 araR K Transcriptional regulator
PDLKLNFD_01054 1.8e-122 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PDLKLNFD_01055 2.9e-229 1.7.1.15 S Pyridine nucleotide-disulphide oxidoreductase
PDLKLNFD_01056 4.2e-70 S Pyrimidine dimer DNA glycosylase
PDLKLNFD_01057 4.5e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
PDLKLNFD_01058 3.6e-11
PDLKLNFD_01059 9e-13 ytgB S Transglycosylase associated protein
PDLKLNFD_01060 1.9e-291 katA 1.11.1.6 C Belongs to the catalase family
PDLKLNFD_01061 4.9e-78 yneH 1.20.4.1 K ArsC family
PDLKLNFD_01062 2.8e-134 K LytTr DNA-binding domain
PDLKLNFD_01063 8.7e-160 2.7.13.3 T GHKL domain
PDLKLNFD_01064 1.8e-12
PDLKLNFD_01065 2.4e-67 agrB KOT May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
PDLKLNFD_01066 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
PDLKLNFD_01068 2.3e-201 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PDLKLNFD_01069 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDLKLNFD_01070 8.7e-72 K Transcriptional regulator
PDLKLNFD_01071 0.0 spxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDLKLNFD_01072 8.6e-63 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDLKLNFD_01073 1.3e-174 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PDLKLNFD_01074 2e-100 srlA G PTS system enzyme II sorbitol-specific factor
PDLKLNFD_01075 1.1e-86 gutM K Glucitol operon activator protein (GutM)
PDLKLNFD_01076 0.0 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
PDLKLNFD_01077 1.5e-144 IQ NAD dependent epimerase/dehydratase family
PDLKLNFD_01078 2.7e-160 rbsU U ribose uptake protein RbsU
PDLKLNFD_01079 7.9e-67 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PDLKLNFD_01080 2.3e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDLKLNFD_01081 5.9e-188 rbsR K helix_turn _helix lactose operon repressor
PDLKLNFD_01082 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDLKLNFD_01083 2.7e-79 T Universal stress protein family
PDLKLNFD_01084 2.2e-99 padR K Virulence activator alpha C-term
PDLKLNFD_01085 1.7e-104 padC Q Phenolic acid decarboxylase
PDLKLNFD_01086 3.7e-140 tesE Q hydratase
PDLKLNFD_01087 2.2e-87 yjaB_1 K Acetyltransferase (GNAT) domain
PDLKLNFD_01088 1.2e-157 degV S DegV family
PDLKLNFD_01089 2.4e-58 2.6.1.2, 2.6.1.66 K Bacteriophage CI repressor helix-turn-helix domain
PDLKLNFD_01090 1.5e-255 pepC 3.4.22.40 E aminopeptidase
PDLKLNFD_01092 1.2e-108 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDLKLNFD_01093 1.3e-303
PDLKLNFD_01095 1.2e-159 S Bacterial protein of unknown function (DUF916)
PDLKLNFD_01096 6.9e-93 S Cell surface protein
PDLKLNFD_01097 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDLKLNFD_01098 4.6e-255 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDLKLNFD_01099 2.1e-129 jag S R3H domain protein
PDLKLNFD_01100 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDLKLNFD_01101 6.4e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDLKLNFD_01102 9.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDLKLNFD_01103 2e-208 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDLKLNFD_01104 5e-37 yaaA S S4 domain protein YaaA
PDLKLNFD_01105 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDLKLNFD_01106 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDLKLNFD_01107 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDLKLNFD_01108 1.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PDLKLNFD_01109 6.8e-62 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDLKLNFD_01110 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDLKLNFD_01111 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PDLKLNFD_01112 1.4e-67 rplI J Binds to the 23S rRNA
PDLKLNFD_01113 7.8e-242 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDLKLNFD_01114 8.8e-226 yttB EGP Major facilitator Superfamily
PDLKLNFD_01115 3.6e-143 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDLKLNFD_01116 1.9e-228 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDLKLNFD_01118 1.9e-276 E ABC transporter, substratebinding protein
PDLKLNFD_01119 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDLKLNFD_01120 1.5e-214 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDLKLNFD_01121 6.3e-197 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PDLKLNFD_01122 6.8e-278 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PDLKLNFD_01123 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDLKLNFD_01124 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PDLKLNFD_01126 1.3e-142 S haloacid dehalogenase-like hydrolase
PDLKLNFD_01127 1e-119 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PDLKLNFD_01128 0.0 trePP 2.4.1.216, 2.4.1.8, 3.1.3.12, 3.2.1.28 GH37,GH65 G Glycosyl hydrolase family 65 central catalytic domain
PDLKLNFD_01129 1.3e-78 S Pyridoxamine 5'-phosphate oxidase
PDLKLNFD_01130 1.6e-31 cspA K Cold shock protein domain
PDLKLNFD_01131 1.7e-37
PDLKLNFD_01133 6.2e-131 K response regulator
PDLKLNFD_01134 0.0 vicK 2.7.13.3 T Histidine kinase
PDLKLNFD_01135 2.7e-244 yycH S YycH protein
PDLKLNFD_01136 2.2e-151 yycI S YycH protein
PDLKLNFD_01137 8.9e-158 vicX 3.1.26.11 S domain protein
PDLKLNFD_01138 6.8e-173 htrA 3.4.21.107 O serine protease
PDLKLNFD_01139 3.6e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDLKLNFD_01140 1.5e-95 K Bacterial regulatory proteins, tetR family
PDLKLNFD_01141 1.7e-260 calB 1.2.1.68 C Belongs to the aldehyde dehydrogenase family
PDLKLNFD_01142 1.8e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
PDLKLNFD_01143 9.1e-121 pnb C nitroreductase
PDLKLNFD_01144 2.6e-64 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PDLKLNFD_01145 2e-115 S Elongation factor G-binding protein, N-terminal
PDLKLNFD_01146 0.0 nqr 1.3.5.4, 1.5.1.36 C FMN_bind
PDLKLNFD_01147 1.6e-258 P Sodium:sulfate symporter transmembrane region
PDLKLNFD_01148 2.3e-82 K LysR family
PDLKLNFD_01149 7.3e-65 K LysR family
PDLKLNFD_01150 1e-72 C FMN binding
PDLKLNFD_01151 1.1e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDLKLNFD_01152 2.3e-164 ptlF S KR domain
PDLKLNFD_01153 6.4e-159 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PDLKLNFD_01154 1.3e-122 drgA C Nitroreductase family
PDLKLNFD_01155 1.3e-290 QT PucR C-terminal helix-turn-helix domain
PDLKLNFD_01156 5.5e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PDLKLNFD_01157 3.3e-194 pva1 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDLKLNFD_01158 7.4e-250 yjjP S Putative threonine/serine exporter
PDLKLNFD_01159 1.7e-134 wzb 3.1.3.48 T Tyrosine phosphatase family
PDLKLNFD_01160 1.4e-254 1.14.14.9 Q 4-hydroxyphenylacetate
PDLKLNFD_01161 2.9e-81 6.3.3.2 S ASCH
PDLKLNFD_01162 1.4e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
PDLKLNFD_01163 5.5e-172 yobV1 K WYL domain
PDLKLNFD_01164 1e-116 azoR C Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PDLKLNFD_01165 0.0 tetP J elongation factor G
PDLKLNFD_01166 8.2e-39 S Protein of unknown function
PDLKLNFD_01167 2.7e-61 S Protein of unknown function
PDLKLNFD_01168 3.6e-152 EG EamA-like transporter family
PDLKLNFD_01169 3.6e-93 MA20_25245 K FR47-like protein
PDLKLNFD_01170 2e-126 hchA S DJ-1/PfpI family
PDLKLNFD_01171 5.4e-181 1.1.1.1 C nadph quinone reductase
PDLKLNFD_01172 1.7e-49 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDLKLNFD_01173 3.9e-235 mepA V MATE efflux family protein
PDLKLNFD_01174 6.5e-167 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PDLKLNFD_01175 1e-139 S Belongs to the UPF0246 family
PDLKLNFD_01176 6e-76
PDLKLNFD_01177 2.3e-311 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PDLKLNFD_01178 9.1e-141
PDLKLNFD_01180 3.1e-139 2.7.7.47 H Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
PDLKLNFD_01181 4.8e-40
PDLKLNFD_01182 3.9e-128 cbiO P ABC transporter
PDLKLNFD_01183 2.6e-149 P Cobalt transport protein
PDLKLNFD_01184 4.8e-182 nikMN P PDGLE domain
PDLKLNFD_01185 4.2e-121 K Crp-like helix-turn-helix domain
PDLKLNFD_01186 1e-240 larA 5.1.2.1 S Domain of unknown function (DUF2088)
PDLKLNFD_01187 2.4e-125 larB S AIR carboxylase
PDLKLNFD_01188 6.3e-132 larC 4.99.1.12 S Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PDLKLNFD_01189 5e-75 larC 4.99.1.12 S Protein of unknown function DUF111
PDLKLNFD_01190 1.5e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDLKLNFD_01191 2.8e-151 larE S NAD synthase
PDLKLNFD_01192 8.7e-176 1.6.5.5 C Zinc-binding dehydrogenase
PDLKLNFD_01193 3.2e-136 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PDLKLNFD_01194 9.1e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDLKLNFD_01195 2.5e-110 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDLKLNFD_01196 1.9e-204 cytX U Belongs to the purine-cytosine permease (2.A.39) family
PDLKLNFD_01197 5.1e-136 S peptidase C26
PDLKLNFD_01198 4e-303 L HIRAN domain
PDLKLNFD_01199 9.9e-85 F NUDIX domain
PDLKLNFD_01200 2.6e-250 yifK E Amino acid permease
PDLKLNFD_01201 7.6e-121
PDLKLNFD_01202 9.5e-149 ydjP I Alpha/beta hydrolase family
PDLKLNFD_01203 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PDLKLNFD_01204 7.1e-156 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDLKLNFD_01205 6.3e-48 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDLKLNFD_01206 1.6e-99 S CRISPR-associated protein (Cas_Csn2)
PDLKLNFD_01207 0.0 pacL1 P P-type ATPase
PDLKLNFD_01208 5.8e-143 2.4.2.3 F Phosphorylase superfamily
PDLKLNFD_01209 1.6e-28 KT PspC domain
PDLKLNFD_01210 2.1e-111 S NADPH-dependent FMN reductase
PDLKLNFD_01211 1.1e-75 papX3 K Transcriptional regulator
PDLKLNFD_01212 6e-73 hsp1 O Belongs to the small heat shock protein (HSP20) family
PDLKLNFD_01213 1e-81 S Protein of unknown function (DUF3021)
PDLKLNFD_01214 1.2e-67 K LytTr DNA-binding domain
PDLKLNFD_01215 4.7e-227 mdtG EGP Major facilitator Superfamily
PDLKLNFD_01216 5e-51 cadC1 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDLKLNFD_01217 8.1e-216 yeaN P Transporter, major facilitator family protein
PDLKLNFD_01219 3.4e-160 S reductase
PDLKLNFD_01220 1.2e-165 1.1.1.65 C Aldo keto reductase
PDLKLNFD_01221 1.3e-81 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase like
PDLKLNFD_01222 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
PDLKLNFD_01223 1.9e-51
PDLKLNFD_01224 8e-253
PDLKLNFD_01225 1.4e-206 C Oxidoreductase
PDLKLNFD_01226 1.6e-149 cbiQ P cobalt transport
PDLKLNFD_01227 0.0 ykoD P ABC transporter, ATP-binding protein
PDLKLNFD_01228 2.5e-98 S UPF0397 protein
PDLKLNFD_01230 1.6e-129 K UbiC transcription regulator-associated domain protein
PDLKLNFD_01231 8.3e-54 K Transcriptional regulator PadR-like family
PDLKLNFD_01232 1.7e-142
PDLKLNFD_01233 2.6e-149
PDLKLNFD_01234 9.1e-89
PDLKLNFD_01235 1.2e-143 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PDLKLNFD_01236 2.2e-168 yjjC V ABC transporter
PDLKLNFD_01237 3.5e-299 M Exporter of polyketide antibiotics
PDLKLNFD_01238 1.6e-117 K Transcriptional regulator
PDLKLNFD_01239 1.4e-276 C Electron transfer flavoprotein FAD-binding domain
PDLKLNFD_01240 8.6e-74 folT 2.7.13.3 T ECF transporter, substrate-specific component
PDLKLNFD_01242 1.9e-92 K Bacterial regulatory proteins, tetR family
PDLKLNFD_01243 1.4e-189 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDLKLNFD_01244 4.3e-186 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDLKLNFD_01245 1.9e-101 dhaL 2.7.1.121 S Dak2
PDLKLNFD_01246 9e-57 dhaM 2.7.1.121 S PTS system fructose IIA component
PDLKLNFD_01247 8.6e-133 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDLKLNFD_01248 2.9e-190 malR K Transcriptional regulator, LacI family
PDLKLNFD_01249 2e-180 yvdE K helix_turn _helix lactose operon repressor
PDLKLNFD_01250 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PDLKLNFD_01251 4.2e-231 mdxE G Bacterial extracellular solute-binding protein
PDLKLNFD_01252 2.2e-227 malC P Binding-protein-dependent transport system inner membrane component
PDLKLNFD_01253 1.4e-161 malD P ABC transporter permease
PDLKLNFD_01254 5.3e-150 malA S maltodextrose utilization protein MalA
PDLKLNFD_01255 1.5e-258 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
PDLKLNFD_01256 4e-209 msmK P Belongs to the ABC transporter superfamily
PDLKLNFD_01257 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PDLKLNFD_01258 0.0 3.2.1.96 G Glycosyl hydrolase family 85
PDLKLNFD_01259 1.5e-45 ygbF S Sugar efflux transporter for intercellular exchange
PDLKLNFD_01260 1.8e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PDLKLNFD_01261 0.0 rafA 3.2.1.22 G alpha-galactosidase
PDLKLNFD_01262 0.0 scrA 2.7.1.193, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PDLKLNFD_01263 1.4e-305 scrB 3.2.1.26 GH32 G invertase
PDLKLNFD_01264 9.1e-173 scrR K Transcriptional regulator, LacI family
PDLKLNFD_01265 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PDLKLNFD_01266 1.3e-165 3.5.1.10 C nadph quinone reductase
PDLKLNFD_01267 1.1e-217 nhaC C Na H antiporter NhaC
PDLKLNFD_01268 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PDLKLNFD_01269 3.6e-123 mleR K LysR substrate binding domain
PDLKLNFD_01270 0.0 3.6.4.13 M domain protein
PDLKLNFD_01272 2.1e-157 hipB K Helix-turn-helix
PDLKLNFD_01273 0.0 oppA E ABC transporter, substratebinding protein
PDLKLNFD_01274 3.5e-310 oppA E ABC transporter, substratebinding protein
PDLKLNFD_01275 2.6e-79 yiaC K Acetyltransferase (GNAT) domain
PDLKLNFD_01276 1.1e-214 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDLKLNFD_01277 7e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDLKLNFD_01278 3e-113 pgm1 G phosphoglycerate mutase
PDLKLNFD_01279 1e-179 yghZ C Aldo keto reductase family protein
PDLKLNFD_01280 4.9e-34
PDLKLNFD_01281 1.9e-10 S Domain of unknown function (DU1801)
PDLKLNFD_01282 4.9e-162 FbpA K Domain of unknown function (DUF814)
PDLKLNFD_01283 4.5e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDLKLNFD_01285 1.9e-56 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDLKLNFD_01286 8.5e-50 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDLKLNFD_01287 3.6e-261 S ATPases associated with a variety of cellular activities
PDLKLNFD_01288 1.8e-116 P cobalt transport
PDLKLNFD_01289 1.4e-259 P ABC transporter
PDLKLNFD_01290 3.1e-101 S ABC transporter permease
PDLKLNFD_01291 4.8e-90 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PDLKLNFD_01292 1.4e-158 dkgB S reductase
PDLKLNFD_01293 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDLKLNFD_01294 6.7e-69
PDLKLNFD_01295 7.4e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDLKLNFD_01296 2e-174 P Major Facilitator Superfamily
PDLKLNFD_01297 3.5e-224 1.3.5.4 C FAD dependent oxidoreductase
PDLKLNFD_01298 3.6e-99 K Helix-turn-helix domain
PDLKLNFD_01299 5.7e-277 pipD E Dipeptidase
PDLKLNFD_01300 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PDLKLNFD_01301 0.0 mtlR K Mga helix-turn-helix domain
PDLKLNFD_01302 1.7e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_01303 4.3e-222 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PDLKLNFD_01304 2.9e-75
PDLKLNFD_01305 6.2e-57 trxA1 O Belongs to the thioredoxin family
PDLKLNFD_01306 1.1e-50
PDLKLNFD_01307 6.6e-96
PDLKLNFD_01308 2e-62
PDLKLNFD_01309 6.6e-81 ndk 2.7.4.6 F Belongs to the NDK family
PDLKLNFD_01310 7.6e-255 S Uncharacterized protein conserved in bacteria (DUF2252)
PDLKLNFD_01311 5.4e-98 yieF S NADPH-dependent FMN reductase
PDLKLNFD_01312 2.5e-124 K helix_turn_helix gluconate operon transcriptional repressor
PDLKLNFD_01313 5.1e-229 pts3C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_01314 1e-38
PDLKLNFD_01315 4.2e-211 S Bacterial protein of unknown function (DUF871)
PDLKLNFD_01316 7.8e-213 dho 3.5.2.3 S Amidohydrolase family
PDLKLNFD_01317 5.2e-201 selA 2.9.1.1 H L-seryl-tRNA selenium transferase
PDLKLNFD_01318 2.7e-39 4.1.2.14 S KDGP aldolase
PDLKLNFD_01319 8.2e-73 4.1.2.14 S KDGP aldolase
PDLKLNFD_01320 1.7e-190 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
PDLKLNFD_01321 1.2e-94 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
PDLKLNFD_01322 2e-211 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PDLKLNFD_01323 4.5e-166 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDLKLNFD_01324 7.8e-159 map 3.4.11.18 E Methionine Aminopeptidase
PDLKLNFD_01325 4.3e-141 pnuC H nicotinamide mononucleotide transporter
PDLKLNFD_01326 7.3e-43 S Protein of unknown function (DUF2089)
PDLKLNFD_01327 1.7e-42
PDLKLNFD_01328 3.5e-129 treR K UTRA
PDLKLNFD_01329 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PDLKLNFD_01330 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDLKLNFD_01331 0.0 pts4ABC 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PDLKLNFD_01332 1.4e-144
PDLKLNFD_01333 4.9e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PDLKLNFD_01334 2.1e-235 tagF1 2.7.8.12, 2.7.8.45 M glycerophosphotransferase
PDLKLNFD_01335 0.0 tagF2 2.7.8.12 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDLKLNFD_01336 7e-168 S Psort location CytoplasmicMembrane, score
PDLKLNFD_01337 5.9e-100 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PDLKLNFD_01338 1.6e-70
PDLKLNFD_01339 1.8e-72 K Transcriptional regulator
PDLKLNFD_01340 4.3e-121 K Bacterial regulatory proteins, tetR family
PDLKLNFD_01341 8.5e-233 mntH P H( )-stimulated, divalent metal cation uptake system
PDLKLNFD_01342 5.5e-118
PDLKLNFD_01343 5.2e-42
PDLKLNFD_01344 1e-40
PDLKLNFD_01345 6.3e-252 ydiC1 EGP Major facilitator Superfamily
PDLKLNFD_01346 3.3e-65 K helix_turn_helix, mercury resistance
PDLKLNFD_01347 2.3e-251 T PhoQ Sensor
PDLKLNFD_01348 6.4e-128 K Transcriptional regulatory protein, C terminal
PDLKLNFD_01349 1.8e-49
PDLKLNFD_01350 2.1e-129 yidA K Helix-turn-helix domain, rpiR family
PDLKLNFD_01351 1e-243 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_01352 9.9e-57
PDLKLNFD_01353 2.1e-41
PDLKLNFD_01354 5.4e-184 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDLKLNFD_01355 2e-258 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
PDLKLNFD_01356 1.3e-47
PDLKLNFD_01357 2.7e-123 2.7.6.5 S RelA SpoT domain protein
PDLKLNFD_01358 3.1e-104 K transcriptional regulator
PDLKLNFD_01359 0.0 ydgH S MMPL family
PDLKLNFD_01360 2.9e-107 tag 3.2.2.20 L glycosylase
PDLKLNFD_01361 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PDLKLNFD_01362 1.7e-194 yclI V MacB-like periplasmic core domain
PDLKLNFD_01363 7.1e-121 yclH V ABC transporter
PDLKLNFD_01364 2.5e-114 V CAAX protease self-immunity
PDLKLNFD_01365 4.5e-121 S CAAX protease self-immunity
PDLKLNFD_01366 8.5e-52 M Lysin motif
PDLKLNFD_01367 1.8e-52 lytE M LysM domain protein
PDLKLNFD_01368 7.4e-67 gcvH E Glycine cleavage H-protein
PDLKLNFD_01369 1.8e-175 sepS16B
PDLKLNFD_01370 3.7e-131
PDLKLNFD_01371 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PDLKLNFD_01372 2.9e-55
PDLKLNFD_01373 8.9e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDLKLNFD_01374 7.2e-77 elaA S GNAT family
PDLKLNFD_01375 1.7e-75 K Transcriptional regulator
PDLKLNFD_01376 7.8e-227 ndh 1.6.99.3 C NADH dehydrogenase
PDLKLNFD_01377 6.2e-39
PDLKLNFD_01378 4e-206 potD P ABC transporter
PDLKLNFD_01379 3.4e-141 potC P ABC transporter permease
PDLKLNFD_01380 2e-149 potB P ABC transporter permease
PDLKLNFD_01381 1.5e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDLKLNFD_01382 8.5e-96 puuR K Cupin domain
PDLKLNFD_01383 1.1e-83 6.3.3.2 S ASCH
PDLKLNFD_01384 1e-84 K GNAT family
PDLKLNFD_01385 8e-91 K acetyltransferase
PDLKLNFD_01386 8.1e-22
PDLKLNFD_01387 1.4e-59 ytrA K helix_turn_helix gluconate operon transcriptional repressor
PDLKLNFD_01388 2e-163 ytrB V ABC transporter
PDLKLNFD_01389 4.9e-190
PDLKLNFD_01390 1.1e-256 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
PDLKLNFD_01391 2.8e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PDLKLNFD_01393 2.3e-240 xylP1 G MFS/sugar transport protein
PDLKLNFD_01394 3e-122 qmcA O prohibitin homologues
PDLKLNFD_01395 3e-30
PDLKLNFD_01396 1.1e-280 pipD E Dipeptidase
PDLKLNFD_01397 3e-40
PDLKLNFD_01398 6.8e-96 bioY S BioY family
PDLKLNFD_01399 1.6e-177 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDLKLNFD_01400 1.9e-60 S CHY zinc finger
PDLKLNFD_01401 4.4e-225 mtnE 2.6.1.83 E Aminotransferase
PDLKLNFD_01402 7.1e-217
PDLKLNFD_01403 3.5e-154 tagG U Transport permease protein
PDLKLNFD_01404 1e-201 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PDLKLNFD_01405 8.4e-44
PDLKLNFD_01406 2.8e-85 K Transcriptional regulator PadR-like family
PDLKLNFD_01407 2.1e-258 P Major Facilitator Superfamily
PDLKLNFD_01408 4.7e-241 amtB P ammonium transporter
PDLKLNFD_01409 5.4e-178 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDLKLNFD_01410 3.7e-44
PDLKLNFD_01411 1.5e-100 zmp1 O Zinc-dependent metalloprotease
PDLKLNFD_01412 1.8e-119 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PDLKLNFD_01413 7.1e-310 mco Q Multicopper oxidase
PDLKLNFD_01414 3.2e-54 ypaA S Protein of unknown function (DUF1304)
PDLKLNFD_01415 8.8e-95 yxkA S Phosphatidylethanolamine-binding protein
PDLKLNFD_01416 4e-231 flhF N Uncharacterized conserved protein (DUF2075)
PDLKLNFD_01417 9.3e-83 ywnA K Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PDLKLNFD_01418 7.1e-80
PDLKLNFD_01419 5.4e-69 accB 2.3.1.12 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDLKLNFD_01420 3.5e-174 rihC 3.2.2.1 F Nucleoside
PDLKLNFD_01421 2.5e-161 vdlC S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKLNFD_01422 1.1e-77 3.1.26.4 L RNA-DNA hybrid ribonuclease activity
PDLKLNFD_01423 1.8e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PDLKLNFD_01424 1.4e-178 proV E ABC transporter, ATP-binding protein
PDLKLNFD_01425 7.5e-255 gshR 1.8.1.7 C Glutathione reductase
PDLKLNFD_01426 1.5e-299 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDLKLNFD_01427 0.0 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PDLKLNFD_01428 4.7e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDLKLNFD_01429 0.0 M domain protein
PDLKLNFD_01430 1.2e-29 M dTDP-4-dehydrorhamnose reductase activity
PDLKLNFD_01431 5.9e-22 S Barstar (barnase inhibitor)
PDLKLNFD_01432 8.4e-33
PDLKLNFD_01433 5.1e-08
PDLKLNFD_01434 1.5e-16
PDLKLNFD_01435 1.4e-61
PDLKLNFD_01436 1.3e-18 S Barstar (barnase inhibitor)
PDLKLNFD_01437 8.1e-119 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDLKLNFD_01438 4.8e-197 uhpT EGP Major facilitator Superfamily
PDLKLNFD_01439 3.4e-146 3.1.3.102, 3.1.3.104 G Sucrose-6F-phosphate phosphohydrolase
PDLKLNFD_01440 7.3e-166 K Transcriptional regulator
PDLKLNFD_01441 1.4e-150 S hydrolase
PDLKLNFD_01442 1e-254 brnQ U Component of the transport system for branched-chain amino acids
PDLKLNFD_01443 2.1e-208 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDLKLNFD_01446 5.3e-116
PDLKLNFD_01448 4.1e-99 2.7.13.3 T GHKL domain
PDLKLNFD_01449 2.5e-130 plnD K LytTr DNA-binding domain
PDLKLNFD_01450 6.3e-129 S CAAX protease self-immunity
PDLKLNFD_01451 2.4e-22 plnF
PDLKLNFD_01452 6.7e-23
PDLKLNFD_01453 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PDLKLNFD_01454 1.7e-241 mesE M Transport protein ComB
PDLKLNFD_01455 1e-109 S CAAX protease self-immunity
PDLKLNFD_01456 1.7e-117 ypbD S CAAX protease self-immunity
PDLKLNFD_01457 7.1e-108 V CAAX protease self-immunity
PDLKLNFD_01458 9.6e-113 S CAAX protease self-immunity
PDLKLNFD_01459 1.8e-30
PDLKLNFD_01460 0.0 helD 3.6.4.12 L DNA helicase
PDLKLNFD_01461 1.1e-141 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PDLKLNFD_01462 1.7e-190 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDLKLNFD_01463 9e-130 K UbiC transcription regulator-associated domain protein
PDLKLNFD_01464 1.9e-253 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_01465 3.9e-24
PDLKLNFD_01466 2.6e-76 S Domain of unknown function (DUF3284)
PDLKLNFD_01467 1.5e-250 chbC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_01468 1.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKLNFD_01469 1e-162 GK ROK family
PDLKLNFD_01470 4.1e-133 K Helix-turn-helix domain, rpiR family
PDLKLNFD_01471 8.9e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDLKLNFD_01472 8.2e-168 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDLKLNFD_01473 4e-229 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PDLKLNFD_01474 5e-176
PDLKLNFD_01475 1.1e-132 cobB K SIR2 family
PDLKLNFD_01476 2.9e-159 yunF F Protein of unknown function DUF72
PDLKLNFD_01477 5.2e-71 mutT 3.6.1.55 F DNA mismatch repair protein MutT
PDLKLNFD_01478 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDLKLNFD_01479 1.9e-159 bcr1 EGP Major facilitator Superfamily
PDLKLNFD_01480 1.5e-146 tatD L hydrolase, TatD family
PDLKLNFD_01481 4.7e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDLKLNFD_01482 8e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDLKLNFD_01483 3.2e-37 veg S Biofilm formation stimulator VEG
PDLKLNFD_01484 1.5e-163 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDLKLNFD_01485 1.3e-181 S Prolyl oligopeptidase family
PDLKLNFD_01486 9.8e-129 fhuC 3.6.3.35 P ABC transporter
PDLKLNFD_01487 9.2e-131 znuB U ABC 3 transport family
PDLKLNFD_01488 6.6e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PDLKLNFD_01489 3.6e-207 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDLKLNFD_01490 7.4e-152 bla1 3.5.2.6 V Beta-lactamase enzyme family
PDLKLNFD_01491 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDLKLNFD_01492 2.5e-181 S DUF218 domain
PDLKLNFD_01493 4.1e-125
PDLKLNFD_01494 1.7e-148 yxeH S hydrolase
PDLKLNFD_01495 9e-264 ywfO S HD domain protein
PDLKLNFD_01496 3.9e-156 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
PDLKLNFD_01497 3.8e-78 ywiB S Domain of unknown function (DUF1934)
PDLKLNFD_01498 4e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDLKLNFD_01499 3.4e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDLKLNFD_01500 4.7e-246 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDLKLNFD_01501 3.1e-229 tdcC E amino acid
PDLKLNFD_01502 9.8e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PDLKLNFD_01503 7.6e-158 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PDLKLNFD_01504 2.9e-131 S YheO-like PAS domain
PDLKLNFD_01505 5.1e-27
PDLKLNFD_01506 3.6e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDLKLNFD_01507 3e-240 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDLKLNFD_01508 7.8e-41 rpmE2 J Ribosomal protein L31
PDLKLNFD_01509 3.2e-214 J translation release factor activity
PDLKLNFD_01510 9.2e-127 srtA 3.4.22.70 M sortase family
PDLKLNFD_01511 1.7e-91 lemA S LemA family
PDLKLNFD_01512 2.1e-139 htpX O Belongs to the peptidase M48B family
PDLKLNFD_01513 2e-146
PDLKLNFD_01514 1.2e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDLKLNFD_01515 1.1e-257 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDLKLNFD_01516 1e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDLKLNFD_01517 4.9e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDLKLNFD_01518 2.3e-63 ndoA L Toxic component of a toxin-antitoxin (TA) module
PDLKLNFD_01519 0.0 kup P Transport of potassium into the cell
PDLKLNFD_01520 2.9e-193 P ABC transporter, substratebinding protein
PDLKLNFD_01521 2.2e-129 ssuC2 U Binding-protein-dependent transport system inner membrane component
PDLKLNFD_01522 5e-134 P ATPases associated with a variety of cellular activities
PDLKLNFD_01523 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDLKLNFD_01524 4.8e-204 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDLKLNFD_01525 1.2e-188 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PDLKLNFD_01526 1.5e-230 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PDLKLNFD_01527 9.4e-130 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
PDLKLNFD_01528 2.7e-216 argD 2.6.1.11, 2.6.1.17 E acetylornithine
PDLKLNFD_01529 9.4e-189 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDLKLNFD_01530 4.1e-84 S QueT transporter
PDLKLNFD_01531 2.1e-114 S (CBS) domain
PDLKLNFD_01532 1.4e-264 S Putative peptidoglycan binding domain
PDLKLNFD_01533 3.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDLKLNFD_01534 4.5e-100 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDLKLNFD_01535 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDLKLNFD_01536 3.3e-289 yabM S Polysaccharide biosynthesis protein
PDLKLNFD_01537 2.2e-42 yabO J S4 domain protein
PDLKLNFD_01539 1.1e-63 divIC D Septum formation initiator
PDLKLNFD_01540 3.1e-74 yabR J RNA binding
PDLKLNFD_01541 1.9e-253 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDLKLNFD_01542 1.7e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDLKLNFD_01543 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDLKLNFD_01544 1.2e-163 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDLKLNFD_01545 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDLKLNFD_01546 3e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDLKLNFD_01548 3e-252 dtpT U amino acid peptide transporter
PDLKLNFD_01549 2e-151 yjjH S Calcineurin-like phosphoesterase
PDLKLNFD_01553 1.2e-49 5.3.3.19 S Cupin 2, conserved barrel domain protein
PDLKLNFD_01554 2.5e-53 S Cupin domain
PDLKLNFD_01555 1.1e-166 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PDLKLNFD_01556 4.7e-194 ybiR P Citrate transporter
PDLKLNFD_01557 3.7e-151 pnuC H nicotinamide mononucleotide transporter
PDLKLNFD_01558 1.7e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDLKLNFD_01559 6.1e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDLKLNFD_01560 1.6e-123 gntR1 K UbiC transcription regulator-associated domain protein
PDLKLNFD_01561 1.2e-137 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PDLKLNFD_01562 5.2e-289 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDLKLNFD_01563 4.7e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDLKLNFD_01564 0.0 pacL 3.6.3.8 P P-type ATPase
PDLKLNFD_01565 8.9e-72
PDLKLNFD_01566 0.0 yhgF K Tex-like protein N-terminal domain protein
PDLKLNFD_01567 5.7e-82 ydcK S Belongs to the SprT family
PDLKLNFD_01568 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PDLKLNFD_01569 3.1e-156 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDLKLNFD_01571 9.3e-155 G Peptidase_C39 like family
PDLKLNFD_01572 1.3e-168 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PDLKLNFD_01573 3.4e-133 manY G PTS system
PDLKLNFD_01574 3.6e-171 manN G system, mannose fructose sorbose family IID component
PDLKLNFD_01575 4.7e-64 S Domain of unknown function (DUF956)
PDLKLNFD_01576 0.0 levR K Sigma-54 interaction domain
PDLKLNFD_01577 8.6e-72 pts10A 2.7.1.191 G PTS system fructose IIA component
PDLKLNFD_01578 3.1e-87 pts10B 2.7.1.191, 2.7.1.202 G PTS system sorbose subfamily IIB component
PDLKLNFD_01579 5.4e-178 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDLKLNFD_01580 1.4e-63 accB 2.3.1.12 I Biotin-requiring enzyme
PDLKLNFD_01581 1.2e-247 accC2 6.3.4.14, 6.4.1.2 I Biotin carboxylase C-terminal domain
PDLKLNFD_01582 8.3e-140 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDLKLNFD_01583 1.6e-135 accA 2.1.3.15, 6.4.1.2 I Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
PDLKLNFD_01584 4.8e-168 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDLKLNFD_01585 3.3e-167 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PDLKLNFD_01586 1.7e-177 EG EamA-like transporter family
PDLKLNFD_01587 4.7e-128 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDLKLNFD_01588 1.8e-113 zmp2 O Zinc-dependent metalloprotease
PDLKLNFD_01589 7.3e-258 pepC 3.4.22.40 E Peptidase C1-like family
PDLKLNFD_01590 2.1e-123 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDLKLNFD_01591 1.6e-51 HA62_12640 S GCN5-related N-acetyl-transferase
PDLKLNFD_01592 3.6e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PDLKLNFD_01593 1.3e-257 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDLKLNFD_01594 3.7e-205 yacL S domain protein
PDLKLNFD_01595 8.9e-289 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDLKLNFD_01596 2e-269 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDLKLNFD_01597 3.5e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDLKLNFD_01598 2.2e-137 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDLKLNFD_01599 5.3e-98 yacP S YacP-like NYN domain
PDLKLNFD_01600 2.4e-101 sigH K Sigma-70 region 2
PDLKLNFD_01601 6.5e-22 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDLKLNFD_01602 6.8e-29 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDLKLNFD_01603 3.7e-99 nusG K Participates in transcription elongation, termination and antitermination
PDLKLNFD_01604 2.6e-158 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKLNFD_01605 2.4e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDLKLNFD_01606 5.1e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDLKLNFD_01607 4.6e-80 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDLKLNFD_01608 9.9e-56 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDLKLNFD_01609 4.9e-179 F DNA/RNA non-specific endonuclease
PDLKLNFD_01610 1.2e-38 L nuclease
PDLKLNFD_01611 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDLKLNFD_01612 4.6e-108 yvdD 3.2.2.10 S Belongs to the LOG family
PDLKLNFD_01613 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDLKLNFD_01614 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDLKLNFD_01615 6.5e-37 nrdH O Glutaredoxin
PDLKLNFD_01616 2.8e-108 rsmC 2.1.1.172 J Methyltransferase
PDLKLNFD_01617 5.9e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDLKLNFD_01618 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDLKLNFD_01619 5.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDLKLNFD_01620 7.4e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDLKLNFD_01621 2.2e-38 yaaL S Protein of unknown function (DUF2508)
PDLKLNFD_01622 1.9e-118 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDLKLNFD_01623 2.4e-53 yaaQ S Cyclic-di-AMP receptor
PDLKLNFD_01624 3.3e-186 holB 2.7.7.7 L DNA polymerase III
PDLKLNFD_01625 1e-57 yabA L Involved in initiation control of chromosome replication
PDLKLNFD_01626 5.4e-164 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDLKLNFD_01627 2.1e-148 fat 3.1.2.21 I Acyl-ACP thioesterase
PDLKLNFD_01628 2e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDLKLNFD_01629 6.1e-210 phnW 2.5.1.49, 2.6.1.37, 3.11.1.1 E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PDLKLNFD_01630 6.5e-145 phnX 2.6.1.37, 3.1.3.18, 3.11.1.1 E Belongs to the HAD-like hydrolase superfamily. PhnX family
PDLKLNFD_01631 2.6e-144 phnE1 3.6.1.63 U ABC transporter permease
PDLKLNFD_01632 2.3e-137 phnE 3.6.1.63 U Phosphonate ABC transporter permease
PDLKLNFD_01633 9.7e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PDLKLNFD_01634 1.9e-189 phnD P Phosphonate ABC transporter
PDLKLNFD_01635 1.7e-128 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PDLKLNFD_01636 6.7e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PDLKLNFD_01637 1e-81 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PDLKLNFD_01638 1.4e-195 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDLKLNFD_01639 5.7e-307 uup S ABC transporter, ATP-binding protein
PDLKLNFD_01640 1.4e-119 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDLKLNFD_01641 4.6e-109 ydiL S CAAX protease self-immunity
PDLKLNFD_01642 1e-31 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDLKLNFD_01643 8.5e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDLKLNFD_01644 0.0 ydaO E amino acid
PDLKLNFD_01645 2.7e-181 tagO 2.7.8.33, 2.7.8.35 M transferase
PDLKLNFD_01646 4.3e-145 pstS P Phosphate
PDLKLNFD_01647 1.7e-114 yvyE 3.4.13.9 S YigZ family
PDLKLNFD_01648 2.8e-257 comFA L Helicase C-terminal domain protein
PDLKLNFD_01649 7.5e-126 comFC S Competence protein
PDLKLNFD_01650 3.5e-100 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDLKLNFD_01651 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDLKLNFD_01652 3.2e-203 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDLKLNFD_01653 1.2e-216 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PDLKLNFD_01654 1.5e-132 K response regulator
PDLKLNFD_01655 3.5e-250 phoR 2.7.13.3 T Histidine kinase
PDLKLNFD_01656 1.1e-150 pstS P Phosphate
PDLKLNFD_01657 6.8e-162 pstC P probably responsible for the translocation of the substrate across the membrane
PDLKLNFD_01658 1.5e-155 pstA P Phosphate transport system permease protein PstA
PDLKLNFD_01659 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDLKLNFD_01660 1e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDLKLNFD_01661 8.3e-117 phoU P Plays a role in the regulation of phosphate uptake
PDLKLNFD_01662 2e-49 pspC KT positive regulation of macromolecule biosynthetic process
PDLKLNFD_01663 9.2e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PDLKLNFD_01664 1.4e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDLKLNFD_01665 1.9e-163 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDLKLNFD_01666 1.9e-181 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PDLKLNFD_01667 2.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PDLKLNFD_01668 1.9e-124 yliE T Putative diguanylate phosphodiesterase
PDLKLNFD_01669 1.4e-270 nox C NADH oxidase
PDLKLNFD_01670 7.3e-163 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
PDLKLNFD_01671 1.2e-245
PDLKLNFD_01672 1e-205 S Protein conserved in bacteria
PDLKLNFD_01673 6.8e-218 ydaM M Glycosyl transferase family group 2
PDLKLNFD_01674 0.0 ydaN S Bacterial cellulose synthase subunit
PDLKLNFD_01675 1e-132 2.7.7.65 T diguanylate cyclase activity
PDLKLNFD_01676 1.7e-176 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDLKLNFD_01677 2e-109 yviA S Protein of unknown function (DUF421)
PDLKLNFD_01678 1.5e-50 S Protein of unknown function (DUF3290)
PDLKLNFD_01679 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDLKLNFD_01680 3.3e-132 yliE T Putative diguanylate phosphodiesterase
PDLKLNFD_01681 4e-259 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDLKLNFD_01682 3.3e-103 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PDLKLNFD_01683 9e-207 norA EGP Major facilitator Superfamily
PDLKLNFD_01684 1.2e-117 yfbR S HD containing hydrolase-like enzyme
PDLKLNFD_01685 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDLKLNFD_01686 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDLKLNFD_01687 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDLKLNFD_01688 1.8e-231 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDLKLNFD_01689 1.6e-263 argH 4.3.2.1 E argininosuccinate lyase
PDLKLNFD_01690 9.3e-87 S Short repeat of unknown function (DUF308)
PDLKLNFD_01691 1.1e-161 rapZ S Displays ATPase and GTPase activities
PDLKLNFD_01692 2.9e-190 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PDLKLNFD_01693 1.1e-167 whiA K May be required for sporulation
PDLKLNFD_01694 7.5e-305 oppA E ABC transporter, substratebinding protein
PDLKLNFD_01695 3e-176 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDLKLNFD_01696 3e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDLKLNFD_01698 4.2e-245 rpoN K Sigma-54 factor, core binding domain
PDLKLNFD_01699 7.3e-189 cggR K Putative sugar-binding domain
PDLKLNFD_01700 2.6e-191 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDLKLNFD_01701 8.1e-224 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PDLKLNFD_01702 1.2e-137 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDLKLNFD_01703 1.6e-249 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDLKLNFD_01704 1.3e-133
PDLKLNFD_01705 6.6e-295 clcA P chloride
PDLKLNFD_01706 1.2e-30 secG U Preprotein translocase
PDLKLNFD_01707 1.3e-139 est 3.1.1.1 S Serine aminopeptidase, S33
PDLKLNFD_01708 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDLKLNFD_01709 9.3e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDLKLNFD_01710 0.0 3.4.21.72 M Bacterial Ig-like domain (group 3)
PDLKLNFD_01711 1.5e-256 glnP P ABC transporter
PDLKLNFD_01712 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDLKLNFD_01713 5.1e-104 yxjI
PDLKLNFD_01714 4.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PDLKLNFD_01715 1.6e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDLKLNFD_01716 1.4e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDLKLNFD_01717 5e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PDLKLNFD_01718 8.1e-88 2.3.1.128, 2.3.1.178 J Acetyltransferase (GNAT) domain
PDLKLNFD_01719 5.6e-100 dnaQ 2.7.7.7 L DNA polymerase III
PDLKLNFD_01720 8.1e-153 xth 3.1.11.2 L exodeoxyribonuclease III
PDLKLNFD_01721 1.2e-158 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
PDLKLNFD_01722 6.2e-168 murB 1.3.1.98 M Cell wall formation
PDLKLNFD_01723 0.0 yjcE P Sodium proton antiporter
PDLKLNFD_01724 1.3e-90 K helix_turn_helix multiple antibiotic resistance protein
PDLKLNFD_01725 7.1e-121 S Protein of unknown function (DUF1361)
PDLKLNFD_01726 2.7e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDLKLNFD_01727 1.6e-129 ybbR S YbbR-like protein
PDLKLNFD_01728 1.6e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDLKLNFD_01729 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDLKLNFD_01730 1.3e-122 yliE T EAL domain
PDLKLNFD_01731 1.3e-148 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PDLKLNFD_01732 1.1e-104 K Bacterial regulatory proteins, tetR family
PDLKLNFD_01733 1.3e-206 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDLKLNFD_01734 1.5e-52
PDLKLNFD_01735 3e-72
PDLKLNFD_01736 3e-131 1.5.1.39 C nitroreductase
PDLKLNFD_01737 9.2e-139 EGP Transmembrane secretion effector
PDLKLNFD_01738 1.2e-33 G Transmembrane secretion effector
PDLKLNFD_01739 7.5e-299 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDLKLNFD_01740 2.5e-141
PDLKLNFD_01742 1.9e-71 spxA 1.20.4.1 P ArsC family
PDLKLNFD_01743 1.5e-33
PDLKLNFD_01744 1.1e-89 V VanZ like family
PDLKLNFD_01745 1.8e-241 EGP Major facilitator Superfamily
PDLKLNFD_01746 3.2e-175 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDLKLNFD_01747 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDLKLNFD_01748 1.8e-289 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDLKLNFD_01749 5e-153 licD M LicD family
PDLKLNFD_01750 1.3e-82 K Transcriptional regulator
PDLKLNFD_01751 1.5e-19
PDLKLNFD_01752 1.2e-225 pbuG S permease
PDLKLNFD_01753 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDLKLNFD_01754 1.8e-153 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDLKLNFD_01755 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDLKLNFD_01756 5.4e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PDLKLNFD_01757 2e-180 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDLKLNFD_01758 0.0 oatA I Acyltransferase
PDLKLNFD_01759 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDLKLNFD_01760 5e-69 O OsmC-like protein
PDLKLNFD_01761 5.8e-46
PDLKLNFD_01762 8.2e-252 yfnA E Amino Acid
PDLKLNFD_01763 2.5e-88
PDLKLNFD_01764 9.9e-149 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PDLKLNFD_01765 1.7e-72 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PDLKLNFD_01766 1.8e-19
PDLKLNFD_01767 6.3e-105 gmk2 2.7.4.8 F Guanylate kinase
PDLKLNFD_01768 1.3e-81 zur P Belongs to the Fur family
PDLKLNFD_01769 7.1e-12 3.2.1.14 GH18
PDLKLNFD_01770 4.9e-148
PDLKLNFD_01771 8.8e-113 gph 3.1.3.18 S HAD hydrolase, family IA, variant
PDLKLNFD_01772 1.1e-209 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PDLKLNFD_01773 3.3e-170 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDLKLNFD_01774 3.6e-41
PDLKLNFD_01776 9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDLKLNFD_01777 7.8e-149 glnH ET ABC transporter substrate-binding protein
PDLKLNFD_01778 1.3e-108 gluC P ABC transporter permease
PDLKLNFD_01779 4e-108 glnP P ABC transporter permease
PDLKLNFD_01780 2.6e-83 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDLKLNFD_01781 4.7e-154 K CAT RNA binding domain
PDLKLNFD_01782 1e-257 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PDLKLNFD_01783 4.6e-140 G YdjC-like protein
PDLKLNFD_01784 2.7e-244 steT E amino acid
PDLKLNFD_01785 4.8e-73 mgrA K helix_turn_helix multiple antibiotic resistance protein
PDLKLNFD_01786 3.7e-149 XK27_00825 S Sulfite exporter TauE/SafE
PDLKLNFD_01787 2e-71 K MarR family
PDLKLNFD_01788 1.2e-208 EGP Major facilitator Superfamily
PDLKLNFD_01789 3.8e-85 S membrane transporter protein
PDLKLNFD_01790 7.1e-98 K Bacterial regulatory proteins, tetR family
PDLKLNFD_01791 8.7e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDLKLNFD_01792 6.4e-78 3.6.1.55 F NUDIX domain
PDLKLNFD_01793 1.3e-48 sugE U Multidrug resistance protein
PDLKLNFD_01794 1.2e-26
PDLKLNFD_01795 4.7e-128 pgm3 G Phosphoglycerate mutase family
PDLKLNFD_01796 4.7e-125 pgm3 G Phosphoglycerate mutase family
PDLKLNFD_01797 0.0 yjbQ P TrkA C-terminal domain protein
PDLKLNFD_01798 3.1e-178 yqkA 3.6.1.55 F Belongs to the Nudix hydrolase family
PDLKLNFD_01799 7.7e-112 dedA S SNARE associated Golgi protein
PDLKLNFD_01800 0.0 helD 3.6.4.12 L DNA helicase
PDLKLNFD_01801 1.7e-165 fabK 1.3.1.9 S Nitronate monooxygenase
PDLKLNFD_01802 2.5e-177 coaA 2.7.1.33 F Pantothenic acid kinase
PDLKLNFD_01803 8.7e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDLKLNFD_01805 5.1e-143 spoVK O ATPase family associated with various cellular activities (AAA)
PDLKLNFD_01807 2.1e-35 L Helix-turn-helix domain
PDLKLNFD_01808 2e-18 L hmm pf00665
PDLKLNFD_01809 6.9e-29 L hmm pf00665
PDLKLNFD_01810 8.9e-23 L hmm pf00665
PDLKLNFD_01811 2.6e-61
PDLKLNFD_01812 6.2e-50
PDLKLNFD_01813 1.7e-63 K Helix-turn-helix XRE-family like proteins
PDLKLNFD_01814 2e-110 XK27_07075 V CAAX protease self-immunity
PDLKLNFD_01815 4.2e-56 hxlR K HxlR-like helix-turn-helix
PDLKLNFD_01816 7.1e-234 EGP Major facilitator Superfamily
PDLKLNFD_01817 6.7e-164 S Cysteine-rich secretory protein family
PDLKLNFD_01818 7.4e-38 S MORN repeat
PDLKLNFD_01819 0.0 XK27_09800 I Acyltransferase family
PDLKLNFD_01820 1.6e-36 S Transglycosylase associated protein
PDLKLNFD_01821 2.6e-84
PDLKLNFD_01822 7.2e-23
PDLKLNFD_01823 8.7e-72 asp S Asp23 family, cell envelope-related function
PDLKLNFD_01824 5.3e-72 asp2 S Asp23 family, cell envelope-related function
PDLKLNFD_01825 7e-147 Q Fumarylacetoacetate (FAA) hydrolase family
PDLKLNFD_01826 1.3e-155 yjdB S Domain of unknown function (DUF4767)
PDLKLNFD_01827 3.4e-47 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PDLKLNFD_01828 4.1e-101 G Glycogen debranching enzyme
PDLKLNFD_01829 0.0 pepN 3.4.11.2 E aminopeptidase
PDLKLNFD_01830 0.0 N Uncharacterized conserved protein (DUF2075)
PDLKLNFD_01831 2.6e-44 S MazG-like family
PDLKLNFD_01832 3e-90 XK27_09665 5.4.2.11 G Phosphoglycerate mutase family
PDLKLNFD_01833 0.0 nagH 2.7.13.3, 3.2.1.4, 3.2.1.52, 3.2.1.78, 3.2.1.8 GH20,GH26,GH5,GH9 M MucBP domain
PDLKLNFD_01835 3.5e-88 S AAA domain
PDLKLNFD_01836 2.3e-139 K sequence-specific DNA binding
PDLKLNFD_01837 2.3e-96 K Helix-turn-helix domain
PDLKLNFD_01838 6.1e-171 K Transcriptional regulator
PDLKLNFD_01839 0.0 1.3.5.4 C FMN_bind
PDLKLNFD_01841 8.8e-81 rmaD K Transcriptional regulator
PDLKLNFD_01842 4.2e-115 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PDLKLNFD_01843 5.6e-255 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PDLKLNFD_01844 9.9e-199 asnA 6.3.1.1 F aspartate--ammonia ligase
PDLKLNFD_01845 6.7e-278 pipD E Dipeptidase
PDLKLNFD_01846 8.6e-221 2.7.7.7, 3.6.4.12 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PDLKLNFD_01847 1e-41
PDLKLNFD_01848 4.1e-32 L leucine-zipper of insertion element IS481
PDLKLNFD_01849 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDLKLNFD_01850 1.4e-161 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PDLKLNFD_01851 1.5e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDLKLNFD_01852 5.6e-138 S NADPH-dependent FMN reductase
PDLKLNFD_01853 2.3e-179
PDLKLNFD_01854 3.7e-219 yibE S overlaps another CDS with the same product name
PDLKLNFD_01855 1.3e-126 yibF S overlaps another CDS with the same product name
PDLKLNFD_01856 7e-101 3.2.2.20 K FR47-like protein
PDLKLNFD_01857 4.2e-121 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDLKLNFD_01858 9e-192 nlhH_1 I alpha/beta hydrolase fold
PDLKLNFD_01859 1e-254 xylP2 G symporter
PDLKLNFD_01860 5.2e-281 murE 6.3.2.10, 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDLKLNFD_01861 1.6e-219 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PDLKLNFD_01862 0.0 asnB 6.3.5.4 E Asparagine synthase
PDLKLNFD_01863 7.2e-50 azlD S Branched-chain amino acid transport protein (AzlD)
PDLKLNFD_01864 2.2e-120 azlC E branched-chain amino acid
PDLKLNFD_01865 4.4e-35 yyaN K MerR HTH family regulatory protein
PDLKLNFD_01866 1.2e-62
PDLKLNFD_01867 1.4e-117 S Domain of unknown function (DUF4811)
PDLKLNFD_01868 7e-270 lmrB EGP Major facilitator Superfamily
PDLKLNFD_01869 1.7e-84 merR K MerR HTH family regulatory protein
PDLKLNFD_01870 2.6e-58
PDLKLNFD_01871 2e-120 sirR K iron dependent repressor
PDLKLNFD_01872 6e-31 cspC K Cold shock protein
PDLKLNFD_01873 1.5e-130 thrE S Putative threonine/serine exporter
PDLKLNFD_01874 2.2e-76 S Threonine/Serine exporter, ThrE
PDLKLNFD_01875 1.5e-189 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDLKLNFD_01876 2.3e-119 lssY 3.6.1.27 I phosphatase
PDLKLNFD_01877 2e-154 I alpha/beta hydrolase fold
PDLKLNFD_01878 2.8e-99 2.3.1.128 J Acetyltransferase (GNAT) domain
PDLKLNFD_01879 4.2e-92 K Transcriptional regulator
PDLKLNFD_01880 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PDLKLNFD_01881 1.5e-264 lysP E amino acid
PDLKLNFD_01882 1.6e-113 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PDLKLNFD_01883 2.5e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDLKLNFD_01884 4.1e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDLKLNFD_01886 4.6e-163 K Transcriptional regulator
PDLKLNFD_01887 5.7e-163 akr5f 1.1.1.346 S reductase
PDLKLNFD_01888 3.3e-166 S Oxidoreductase, aldo keto reductase family protein
PDLKLNFD_01889 7.9e-79 K Winged helix DNA-binding domain
PDLKLNFD_01890 1.1e-267 ycaM E amino acid
PDLKLNFD_01891 3.1e-128 aroD 1.1.1.25, 4.2.1.10 E Type I 3-dehydroquinase
PDLKLNFD_01892 2.7e-32
PDLKLNFD_01893 0.0 M Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PDLKLNFD_01894 0.0 M Bacterial Ig-like domain (group 3)
PDLKLNFD_01895 1.9e-77 fld C Flavodoxin
PDLKLNFD_01896 1.9e-231
PDLKLNFD_01897 2.1e-88 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PDLKLNFD_01898 1.3e-176 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PDLKLNFD_01899 8.3e-152 EG EamA-like transporter family
PDLKLNFD_01900 6.5e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDLKLNFD_01901 9.8e-152 S hydrolase
PDLKLNFD_01902 1.8e-81
PDLKLNFD_01903 4.2e-121 pgm7 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDLKLNFD_01904 6.8e-141 epsV 2.7.8.12 S glycosyl transferase family 2
PDLKLNFD_01905 1.8e-130 gntR K UTRA
PDLKLNFD_01906 5e-48 pts20B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PDLKLNFD_01907 1.8e-54 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PDLKLNFD_01908 8.6e-297 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKLNFD_01909 6.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKLNFD_01910 1.2e-244 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
PDLKLNFD_01911 8.2e-134 V AAA domain, putative AbiEii toxin, Type IV TA system
PDLKLNFD_01912 3.2e-154 V ABC transporter
PDLKLNFD_01913 1.3e-117 K Transcriptional regulator
PDLKLNFD_01914 1.5e-264 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDLKLNFD_01915 3.6e-88 niaR S 3H domain
PDLKLNFD_01916 4.7e-225 EGP Major facilitator Superfamily
PDLKLNFD_01917 2.1e-232 S Sterol carrier protein domain
PDLKLNFD_01918 1.9e-211 S Bacterial protein of unknown function (DUF871)
PDLKLNFD_01919 1.8e-36 XK27_01315 S Protein of unknown function (DUF2829)
PDLKLNFD_01920 7.5e-135 IQ Enoyl-(Acyl carrier protein) reductase
PDLKLNFD_01921 7.8e-69 FG Scavenger mRNA decapping enzyme C-term binding
PDLKLNFD_01922 1.7e-102 3.6.1.13 L Belongs to the Nudix hydrolase family
PDLKLNFD_01923 1.9e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDLKLNFD_01924 1.5e-11 mcbG S Pentapeptide repeats (8 copies)
PDLKLNFD_01925 4.5e-146 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
PDLKLNFD_01926 3.6e-282 thrC 4.2.3.1 E Threonine synthase
PDLKLNFD_01927 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PDLKLNFD_01929 1.5e-52
PDLKLNFD_01930 5.4e-118
PDLKLNFD_01931 7.3e-86 2.7.7.1, 3.6.1.55 F belongs to the nudix hydrolase family
PDLKLNFD_01932 3.9e-234 malY 4.4.1.8 E Aminotransferase, class I
PDLKLNFD_01934 2.7e-49
PDLKLNFD_01935 4.3e-88
PDLKLNFD_01936 2.1e-70 gtcA S Teichoic acid glycosylation protein
PDLKLNFD_01937 1.2e-35
PDLKLNFD_01938 6.7e-81 uspA T universal stress protein
PDLKLNFD_01939 5.8e-149
PDLKLNFD_01940 6.9e-164 V ABC transporter, ATP-binding protein
PDLKLNFD_01941 7.9e-61 gntR1 K Transcriptional regulator, GntR family
PDLKLNFD_01942 8e-42
PDLKLNFD_01943 0.0 V FtsX-like permease family
PDLKLNFD_01944 1.7e-139 cysA V ABC transporter, ATP-binding protein
PDLKLNFD_01945 1.5e-180 ansA 3.5.1.1 EJ Asparaginase
PDLKLNFD_01946 7.5e-149 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKLNFD_01947 9.2e-118 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
PDLKLNFD_01948 1.4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
PDLKLNFD_01949 8.4e-190 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
PDLKLNFD_01950 1.8e-110 XK27_09620 1.3.5.4 S NADPH-dependent FMN reductase
PDLKLNFD_01951 1.5e-223 XK27_09615 1.3.5.4 S reductase
PDLKLNFD_01952 1.7e-79 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDLKLNFD_01953 7.4e-211 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDLKLNFD_01954 1.9e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PDLKLNFD_01955 3.6e-41 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDLKLNFD_01956 2e-126 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDLKLNFD_01957 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDLKLNFD_01958 4.3e-280 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDLKLNFD_01959 5.2e-187 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PDLKLNFD_01960 9.9e-103 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDLKLNFD_01961 6.6e-287 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PDLKLNFD_01962 6.4e-216 purD 6.3.4.13 F Belongs to the GARS family
PDLKLNFD_01963 5.9e-123 2.1.1.14 E Methionine synthase
PDLKLNFD_01964 3.9e-251 pgaC GT2 M Glycosyl transferase
PDLKLNFD_01965 4.4e-94
PDLKLNFD_01966 6.5e-156 T EAL domain
PDLKLNFD_01967 3.9e-162 GM NmrA-like family
PDLKLNFD_01968 2.4e-221 pbuG S Permease family
PDLKLNFD_01969 2.7e-236 pbuX F xanthine permease
PDLKLNFD_01970 1e-298 pucR QT Purine catabolism regulatory protein-like family
PDLKLNFD_01971 1.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDLKLNFD_01972 7.3e-172 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PDLKLNFD_01973 7.6e-244 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDLKLNFD_01974 1.5e-213 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDLKLNFD_01975 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDLKLNFD_01976 7.4e-169 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDLKLNFD_01977 1.8e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDLKLNFD_01978 6.2e-114 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDLKLNFD_01979 1.3e-171 ydcZ S Putative inner membrane exporter, YdcZ
PDLKLNFD_01980 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PDLKLNFD_01981 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PDLKLNFD_01982 8.2e-96 wecD K Acetyltransferase (GNAT) family
PDLKLNFD_01983 5.6e-115 ylbE GM NAD(P)H-binding
PDLKLNFD_01984 1.9e-161 mleR K LysR family
PDLKLNFD_01985 1.7e-126 S membrane transporter protein
PDLKLNFD_01986 3e-18
PDLKLNFD_01987 1.1e-158 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDLKLNFD_01988 1.4e-217 patA 2.6.1.1 E Aminotransferase
PDLKLNFD_01989 5.5e-261 gabR K Bacterial regulatory proteins, gntR family
PDLKLNFD_01990 6.3e-295 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDLKLNFD_01991 8.5e-57 S SdpI/YhfL protein family
PDLKLNFD_01992 1.8e-173 C Zinc-binding dehydrogenase
PDLKLNFD_01993 1.2e-61 K helix_turn_helix, mercury resistance
PDLKLNFD_01994 1.1e-212 yttB EGP Major facilitator Superfamily
PDLKLNFD_01995 2.6e-270 yjcE P Sodium proton antiporter
PDLKLNFD_01996 4.9e-87 nrdI F Belongs to the NrdI family
PDLKLNFD_01997 1.8e-240 yhdP S Transporter associated domain
PDLKLNFD_01998 4.4e-58
PDLKLNFD_01999 4.1e-74 hspX O Belongs to the small heat shock protein (HSP20) family
PDLKLNFD_02000 4.5e-61
PDLKLNFD_02001 4.2e-92 M1-874 K Domain of unknown function (DUF1836)
PDLKLNFD_02002 5.5e-138 rrp8 K LytTr DNA-binding domain
PDLKLNFD_02003 5e-119 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDLKLNFD_02004 5.2e-139
PDLKLNFD_02005 5.8e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDLKLNFD_02006 2.4e-130 gntR2 K Transcriptional regulator
PDLKLNFD_02007 1.1e-166 S Putative esterase
PDLKLNFD_02008 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDLKLNFD_02009 9.4e-225 lsgC M Glycosyl transferases group 1
PDLKLNFD_02010 5.6e-21 S Protein of unknown function (DUF2929)
PDLKLNFD_02011 1.7e-48 K Cro/C1-type HTH DNA-binding domain
PDLKLNFD_02012 3.7e-69 S response to antibiotic
PDLKLNFD_02013 4.2e-44 S zinc-ribbon domain
PDLKLNFD_02014 5.7e-20
PDLKLNFD_02015 8.7e-154 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDLKLNFD_02016 3e-78 uspA T universal stress protein
PDLKLNFD_02017 0.0 acm2 3.2.1.17 NU Bacterial SH3 domain
PDLKLNFD_02018 5.1e-195 lplA 6.3.1.20 H Lipoate-protein ligase
PDLKLNFD_02019 4e-60
PDLKLNFD_02020 1.7e-73
PDLKLNFD_02021 5e-82 yybC S Protein of unknown function (DUF2798)
PDLKLNFD_02022 6.3e-45
PDLKLNFD_02023 5.2e-47
PDLKLNFD_02024 9.3e-206 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PDLKLNFD_02025 2.3e-56 dsbJ 2.7.1.180, 5.3.4.1 CO Thioredoxin
PDLKLNFD_02026 8.4e-145 yjfP S Dienelactone hydrolase family
PDLKLNFD_02027 5.4e-68
PDLKLNFD_02028 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDLKLNFD_02029 9.7e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDLKLNFD_02030 3.3e-156 yihY S Belongs to the UPF0761 family
PDLKLNFD_02031 6.8e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDLKLNFD_02032 7.7e-219 pbpX1 V Beta-lactamase
PDLKLNFD_02033 3.4e-255 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PDLKLNFD_02034 5e-107
PDLKLNFD_02035 1.3e-73
PDLKLNFD_02037 8.9e-164 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKLNFD_02038 1.4e-245 pts14C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_02039 2.3e-75 T Universal stress protein family
PDLKLNFD_02041 2.6e-239 yfmL 3.6.4.13 L DEAD DEAH box helicase
PDLKLNFD_02042 2.4e-189 mocA S Oxidoreductase
PDLKLNFD_02043 2.7e-31 cspA K 'Cold-shock' DNA-binding domain
PDLKLNFD_02044 1.1e-62 S Domain of unknown function (DUF4828)
PDLKLNFD_02045 2.4e-144 lys M Glycosyl hydrolases family 25
PDLKLNFD_02046 2.3e-151 gntR K rpiR family
PDLKLNFD_02047 6.1e-168 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKLNFD_02048 4e-240 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_02049 0.0 yfgQ P E1-E2 ATPase
PDLKLNFD_02050 2.1e-100 yobS K Bacterial regulatory proteins, tetR family
PDLKLNFD_02051 4e-259 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDLKLNFD_02052 1e-190 yegS 2.7.1.107 G Lipid kinase
PDLKLNFD_02053 7.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDLKLNFD_02054 2.5e-275 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDLKLNFD_02055 3.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDLKLNFD_02056 4.8e-197 camS S sex pheromone
PDLKLNFD_02057 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDLKLNFD_02058 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PDLKLNFD_02059 1.3e-218 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDLKLNFD_02060 1e-93 S UPF0316 protein
PDLKLNFD_02061 9.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDLKLNFD_02062 3.1e-113 acmA 3.2.1.17 NU mannosyl-glycoprotein
PDLKLNFD_02063 8.7e-184 S Oxidoreductase family, NAD-binding Rossmann fold
PDLKLNFD_02064 2.9e-165 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PDLKLNFD_02065 2.3e-182 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDLKLNFD_02066 7.7e-156 ddpX 3.4.13.22 S L,D-transpeptidase catalytic domain
PDLKLNFD_02067 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PDLKLNFD_02068 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PDLKLNFD_02069 2.6e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PDLKLNFD_02070 5.4e-275 cydA 1.10.3.14 C ubiquinol oxidase
PDLKLNFD_02071 0.0 S Alpha beta
PDLKLNFD_02072 2.2e-24
PDLKLNFD_02073 3e-99 S ECF transporter, substrate-specific component
PDLKLNFD_02074 5.8e-253 yfnA E Amino Acid
PDLKLNFD_02075 1.4e-165 mleP S Sodium Bile acid symporter family
PDLKLNFD_02076 4.2e-308 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PDLKLNFD_02077 1.8e-167 mleR K LysR family
PDLKLNFD_02078 1.6e-160 mleR K LysR family transcriptional regulator
PDLKLNFD_02079 1.2e-94 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PDLKLNFD_02080 2.7e-263 frdC 1.3.5.4 C FAD binding domain
PDLKLNFD_02081 6.4e-257 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDLKLNFD_02083 4.6e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PDLKLNFD_02084 5.5e-164 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PDLKLNFD_02085 9e-44 citD C Covalent carrier of the coenzyme of citrate lyase
PDLKLNFD_02086 4.8e-188 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PDLKLNFD_02087 1.7e-207 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
PDLKLNFD_02088 2.9e-179 citR K sugar-binding domain protein
PDLKLNFD_02089 2.2e-260 citP P Sodium:sulfate symporter transmembrane region
PDLKLNFD_02090 1.2e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDLKLNFD_02091 3.1e-50
PDLKLNFD_02092 4.6e-174 sitA P Belongs to the bacterial solute-binding protein 9 family
PDLKLNFD_02093 4.8e-141 mtsB U ABC 3 transport family
PDLKLNFD_02094 4.5e-132 mntB 3.6.3.35 P ABC transporter
PDLKLNFD_02095 2.4e-153 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PDLKLNFD_02096 1.7e-198 K Helix-turn-helix domain
PDLKLNFD_02097 2.2e-176 ttdA 4.2.1.32 C Fumarate hydratase (Fumerase)
PDLKLNFD_02098 5.4e-115 ttdB 4.2.1.2, 4.2.1.32 C Catalyzes the reversible hydration of fumarate to (S)- malate
PDLKLNFD_02099 4.1e-53 yitW S Iron-sulfur cluster assembly protein
PDLKLNFD_02100 4.7e-263 P Sodium:sulfate symporter transmembrane region
PDLKLNFD_02101 4.9e-196 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PDLKLNFD_02102 1.8e-184 aroF 2.5.1.54 E DAHP synthetase I family
PDLKLNFD_02103 8.3e-165 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDLKLNFD_02104 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDLKLNFD_02105 4.2e-203 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PDLKLNFD_02106 1.7e-183 ywhK S Membrane
PDLKLNFD_02107 4e-164 degV S Uncharacterised protein, DegV family COG1307
PDLKLNFD_02108 1.9e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PDLKLNFD_02109 1.3e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDLKLNFD_02110 3.9e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDLKLNFD_02111 4.7e-143 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDLKLNFD_02112 8.2e-165 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDLKLNFD_02113 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDLKLNFD_02114 1.5e-208 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDLKLNFD_02115 3.5e-142 cad S FMN_bind
PDLKLNFD_02116 0.0 ndh 1.6.99.3 C NADH dehydrogenase
PDLKLNFD_02117 1.4e-86 ynhH S NusG domain II
PDLKLNFD_02118 1.7e-94 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
PDLKLNFD_02119 1.4e-181 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDLKLNFD_02120 2.1e-61 rplQ J Ribosomal protein L17
PDLKLNFD_02121 5.7e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDLKLNFD_02122 3.4e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDLKLNFD_02123 1.1e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDLKLNFD_02124 3.9e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDLKLNFD_02125 2.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDLKLNFD_02126 1.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDLKLNFD_02127 6.3e-70 rplO J Binds to the 23S rRNA
PDLKLNFD_02128 2.2e-24 rpmD J Ribosomal protein L30
PDLKLNFD_02129 6.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDLKLNFD_02130 5.6e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDLKLNFD_02131 3.5e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDLKLNFD_02132 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDLKLNFD_02133 3.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDLKLNFD_02134 2.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDLKLNFD_02135 4.3e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDLKLNFD_02136 2.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDLKLNFD_02137 1.4e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PDLKLNFD_02138 9.2e-77 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDLKLNFD_02139 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDLKLNFD_02140 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDLKLNFD_02141 8.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDLKLNFD_02142 8.1e-146 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDLKLNFD_02143 1.8e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDLKLNFD_02144 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
PDLKLNFD_02145 4.4e-112 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDLKLNFD_02146 2.6e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PDLKLNFD_02147 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDLKLNFD_02148 5.5e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDLKLNFD_02149 3.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDLKLNFD_02150 7.8e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PDLKLNFD_02151 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDLKLNFD_02152 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDLKLNFD_02153 1.5e-109 K Bacterial regulatory proteins, tetR family
PDLKLNFD_02154 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDLKLNFD_02155 6.9e-78 ctsR K Belongs to the CtsR family
PDLKLNFD_02163 0.0 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
PDLKLNFD_02164 4.4e-280 1.3.5.4 C FAD binding domain
PDLKLNFD_02165 3e-162 K LysR substrate binding domain
PDLKLNFD_02166 9.7e-152 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PDLKLNFD_02167 3.9e-290 yjcE P Sodium proton antiporter
PDLKLNFD_02168 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDLKLNFD_02169 4e-116 K Bacterial regulatory proteins, tetR family
PDLKLNFD_02170 3.8e-179 NU Mycoplasma protein of unknown function, DUF285
PDLKLNFD_02171 9.6e-90 S WxL domain surface cell wall-binding
PDLKLNFD_02172 1.2e-175 S Bacterial protein of unknown function (DUF916)
PDLKLNFD_02173 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
PDLKLNFD_02174 2.1e-64 K helix_turn_helix, mercury resistance
PDLKLNFD_02175 7.5e-152 IQ Enoyl-(Acyl carrier protein) reductase
PDLKLNFD_02176 1.3e-68 maa S transferase hexapeptide repeat
PDLKLNFD_02177 2.5e-130 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKLNFD_02178 4.1e-164 GM NmrA-like family
PDLKLNFD_02179 5.4e-92 K Bacterial regulatory proteins, tetR family
PDLKLNFD_02180 8.6e-171 fhuG U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDLKLNFD_02181 9.5e-178 sirB U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDLKLNFD_02182 1.1e-144 fhuC 3.6.3.34 HP ABC transporter
PDLKLNFD_02183 5.2e-170 fhuD P Periplasmic binding protein
PDLKLNFD_02184 4.3e-109 K Bacterial regulatory proteins, tetR family
PDLKLNFD_02185 2.3e-252 yfjF U Sugar (and other) transporter
PDLKLNFD_02186 1.5e-180 S Aldo keto reductase
PDLKLNFD_02187 7e-101 S Protein of unknown function (DUF1211)
PDLKLNFD_02188 1.2e-191 1.1.1.219 GM Male sterility protein
PDLKLNFD_02189 3.2e-98 K Bacterial regulatory proteins, tetR family
PDLKLNFD_02190 9.8e-132 ydfG S KR domain
PDLKLNFD_02191 3.7e-63 hxlR K HxlR-like helix-turn-helix
PDLKLNFD_02192 2.9e-47 S Domain of unknown function (DUF1905)
PDLKLNFD_02193 0.0 M Glycosyl hydrolases family 25
PDLKLNFD_02194 9.1e-267 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PDLKLNFD_02195 2.4e-167 GM NmrA-like family
PDLKLNFD_02196 1.4e-99 fadR K Bacterial regulatory proteins, tetR family
PDLKLNFD_02197 3e-205 2.7.13.3 T GHKL domain
PDLKLNFD_02198 8.2e-134 K LytTr DNA-binding domain
PDLKLNFD_02199 0.0 asnB 6.3.5.4 E Asparagine synthase
PDLKLNFD_02200 1.4e-94 M ErfK YbiS YcfS YnhG
PDLKLNFD_02201 4.9e-213 ytbD EGP Major facilitator Superfamily
PDLKLNFD_02202 2e-61 K Transcriptional regulator, HxlR family
PDLKLNFD_02203 3e-116 S Haloacid dehalogenase-like hydrolase
PDLKLNFD_02204 5.9e-117
PDLKLNFD_02205 1.2e-214 NU Mycoplasma protein of unknown function, DUF285
PDLKLNFD_02206 1.1e-62
PDLKLNFD_02207 7.5e-101 S WxL domain surface cell wall-binding
PDLKLNFD_02208 4.7e-188 S Cell surface protein
PDLKLNFD_02209 2.5e-115 S GyrI-like small molecule binding domain
PDLKLNFD_02210 3.8e-69 S Iron-sulphur cluster biosynthesis
PDLKLNFD_02211 2.3e-176 1.6.5.5 C Alcohol dehydrogenase GroES-like domain
PDLKLNFD_02212 1.7e-101 S WxL domain surface cell wall-binding
PDLKLNFD_02213 9.2e-187 S Cell surface protein
PDLKLNFD_02214 1.3e-75
PDLKLNFD_02215 1.4e-262
PDLKLNFD_02216 3.5e-228 hpk9 2.7.13.3 T GHKL domain
PDLKLNFD_02217 2.9e-38 S TfoX C-terminal domain
PDLKLNFD_02218 5.1e-139 K Helix-turn-helix domain
PDLKLNFD_02219 0.0 M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDLKLNFD_02220 2.4e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDLKLNFD_02221 2.7e-42 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDLKLNFD_02222 0.0 ctpA 3.6.3.54 P P-type ATPase
PDLKLNFD_02223 2.3e-212 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
PDLKLNFD_02224 1.1e-155 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
PDLKLNFD_02225 3.9e-40 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
PDLKLNFD_02226 3.9e-66 lysM M LysM domain
PDLKLNFD_02227 6.2e-266 yjeM E Amino Acid
PDLKLNFD_02228 2.5e-144 K Helix-turn-helix XRE-family like proteins
PDLKLNFD_02229 1.1e-69
PDLKLNFD_02231 7.7e-163 IQ KR domain
PDLKLNFD_02232 4.3e-225 amd 3.5.1.47 E Peptidase family M20/M25/M40
PDLKLNFD_02233 3.5e-42
PDLKLNFD_02234 1.1e-309 XK27_09600 V ABC transporter, ATP-binding protein
PDLKLNFD_02235 0.0 V ABC transporter
PDLKLNFD_02236 8.6e-218 ykiI
PDLKLNFD_02237 1.2e-115 GM NAD(P)H-binding
PDLKLNFD_02238 1.9e-138 IQ reductase
PDLKLNFD_02239 3.7e-60 I sulfurtransferase activity
PDLKLNFD_02240 2.3e-77 yphH S Cupin domain
PDLKLNFD_02241 4.7e-93 S Phosphatidylethanolamine-binding protein
PDLKLNFD_02242 1.6e-117 GM NAD(P)H-binding
PDLKLNFD_02243 7.4e-176 C C4-dicarboxylate transmembrane transporter activity
PDLKLNFD_02244 3.8e-131 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKLNFD_02245 1.3e-72
PDLKLNFD_02246 3.4e-166 K Bacterial regulatory helix-turn-helix protein, lysR family
PDLKLNFD_02247 4.7e-285 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
PDLKLNFD_02248 9.3e-74 S Psort location Cytoplasmic, score
PDLKLNFD_02249 8.8e-220 T diguanylate cyclase
PDLKLNFD_02250 1.5e-120 tag 3.2.2.20 L Methyladenine glycosylase
PDLKLNFD_02251 4.2e-92
PDLKLNFD_02252 9.1e-164 psaA P Belongs to the bacterial solute-binding protein 9 family
PDLKLNFD_02253 1.8e-54 nudA S ASCH
PDLKLNFD_02254 4.7e-108 S SdpI/YhfL protein family
PDLKLNFD_02255 6.1e-34 M Lysin motif
PDLKLNFD_02256 2.5e-42 M Lysin motif
PDLKLNFD_02257 2.3e-65 M LysM domain
PDLKLNFD_02258 5.1e-75 K helix_turn_helix, mercury resistance
PDLKLNFD_02259 4.4e-186 1.1.1.219 GM Male sterility protein
PDLKLNFD_02260 8.3e-281 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKLNFD_02261 2.7e-269 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKLNFD_02262 7e-53 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PDLKLNFD_02263 3.4e-74 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDLKLNFD_02264 5.3e-150 dicA K Helix-turn-helix domain
PDLKLNFD_02265 3.2e-55
PDLKLNFD_02266 3.4e-160 T Calcineurin-like phosphoesterase superfamily domain
PDLKLNFD_02267 8.2e-63
PDLKLNFD_02268 0.0 P Concanavalin A-like lectin/glucanases superfamily
PDLKLNFD_02269 0.0 yhcA V ABC transporter, ATP-binding protein
PDLKLNFD_02270 1.2e-95 cadD P Cadmium resistance transporter
PDLKLNFD_02271 2e-49 K Transcriptional regulator, ArsR family
PDLKLNFD_02272 1.9e-116 S SNARE associated Golgi protein
PDLKLNFD_02273 1.1e-46
PDLKLNFD_02274 6.8e-72 T Belongs to the universal stress protein A family
PDLKLNFD_02275 2.1e-283 mntH P H( )-stimulated, divalent metal cation uptake system
PDLKLNFD_02276 1.6e-122 K Helix-turn-helix XRE-family like proteins
PDLKLNFD_02277 2.8e-82 gtrA S GtrA-like protein
PDLKLNFD_02278 3.5e-114 zmp3 O Zinc-dependent metalloprotease
PDLKLNFD_02279 7e-33
PDLKLNFD_02281 6e-211 livJ E Receptor family ligand binding region
PDLKLNFD_02282 6.5e-154 livH U Branched-chain amino acid transport system / permease component
PDLKLNFD_02283 5.3e-141 livM E Branched-chain amino acid transport system / permease component
PDLKLNFD_02284 1.8e-139 livG E Branched-chain amino acid ATP-binding cassette transporter
PDLKLNFD_02285 3.3e-124 livF E ABC transporter
PDLKLNFD_02286 2.4e-97 acuB S Domain in cystathionine beta-synthase and other proteins.
PDLKLNFD_02287 1e-91 S WxL domain surface cell wall-binding
PDLKLNFD_02288 7.3e-189 S Cell surface protein
PDLKLNFD_02289 8.6e-63
PDLKLNFD_02290 4.7e-261
PDLKLNFD_02291 3.5e-169 XK27_00670 S ABC transporter
PDLKLNFD_02292 2.6e-151 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
PDLKLNFD_02293 9e-119 cmpC S ATPases associated with a variety of cellular activities
PDLKLNFD_02294 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PDLKLNFD_02295 1.3e-119 drgA C Nitroreductase family
PDLKLNFD_02296 1.1e-95 rmaB K Transcriptional regulator, MarR family
PDLKLNFD_02297 0.0 lmrA 3.6.3.44 V ABC transporter
PDLKLNFD_02298 1.7e-162 ypbG 2.7.1.2 GK ROK family
PDLKLNFD_02299 1.4e-47 3.6.4.12 K HxlR-like helix-turn-helix
PDLKLNFD_02300 2.1e-111 K Transcriptional regulator C-terminal region
PDLKLNFD_02301 3e-178 4.1.1.52 S Amidohydrolase
PDLKLNFD_02302 4.4e-129 E lipolytic protein G-D-S-L family
PDLKLNFD_02303 4e-159 yicL EG EamA-like transporter family
PDLKLNFD_02304 5.5e-224 sdrF M Collagen binding domain
PDLKLNFD_02305 5.1e-270 I acetylesterase activity
PDLKLNFD_02306 5.2e-177 S Phosphotransferase system, EIIC
PDLKLNFD_02307 1.8e-133 aroD S Alpha/beta hydrolase family
PDLKLNFD_02308 3.2e-37
PDLKLNFD_02310 2.6e-135 S zinc-ribbon domain
PDLKLNFD_02311 4.8e-263 S response to antibiotic
PDLKLNFD_02312 3.7e-287 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PDLKLNFD_02313 2.4e-243 P Sodium:sulfate symporter transmembrane region
PDLKLNFD_02314 2.2e-165 K LysR substrate binding domain
PDLKLNFD_02315 4.4e-79
PDLKLNFD_02316 4.9e-22
PDLKLNFD_02317 1.5e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDLKLNFD_02318 6.8e-192 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDLKLNFD_02319 4.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDLKLNFD_02320 2.8e-79
PDLKLNFD_02321 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PDLKLNFD_02322 2.2e-104 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDLKLNFD_02323 3.1e-127 yliE T EAL domain
PDLKLNFD_02324 6.2e-218 2.7.7.65 T Diguanylate cyclase, GGDEF domain
PDLKLNFD_02325 7.5e-89 pts21A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDLKLNFD_02326 5.6e-39 S Cytochrome B5
PDLKLNFD_02327 1.6e-237
PDLKLNFD_02328 4.8e-131 treR K UTRA
PDLKLNFD_02329 2e-160 I alpha/beta hydrolase fold
PDLKLNFD_02330 1.7e-256 npp S type I phosphodiesterase nucleotide pyrophosphatase
PDLKLNFD_02331 2.2e-233 yxiO S Vacuole effluxer Atg22 like
PDLKLNFD_02332 3.7e-249 puuP_1 E Amino acid permease
PDLKLNFD_02333 4.7e-176 pepR1 3.4.11.5 I Releases the N-terminal proline from various substrates
PDLKLNFD_02334 7.6e-174 ropB K Helix-turn-helix XRE-family like proteins
PDLKLNFD_02335 4.4e-209 EGP Major facilitator Superfamily
PDLKLNFD_02336 0.0 uvrA3 L excinuclease ABC
PDLKLNFD_02337 0.0 S Predicted membrane protein (DUF2207)
PDLKLNFD_02338 5.3e-147 3.1.3.102, 3.1.3.104 S hydrolase
PDLKLNFD_02339 3.2e-308 ybiT S ABC transporter, ATP-binding protein
PDLKLNFD_02340 4.5e-222 S CAAX protease self-immunity
PDLKLNFD_02341 1e-132 2.7.1.89 M Phosphotransferase enzyme family
PDLKLNFD_02342 1.1e-95 2.3.1.128 J Acetyltransferase (GNAT) domain
PDLKLNFD_02343 3.2e-103 speG J Acetyltransferase (GNAT) domain
PDLKLNFD_02344 6.3e-139 endA F DNA RNA non-specific endonuclease
PDLKLNFD_02345 1.4e-53 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDLKLNFD_02346 3.4e-109 K Transcriptional regulator (TetR family)
PDLKLNFD_02347 1.6e-261 yhgE V domain protein
PDLKLNFD_02348 6.1e-09
PDLKLNFD_02350 4.8e-244 EGP Major facilitator Superfamily
PDLKLNFD_02351 0.0 mdlA V ABC transporter
PDLKLNFD_02352 0.0 mdlB V ABC transporter
PDLKLNFD_02354 2.4e-192 C Aldo/keto reductase family
PDLKLNFD_02355 1.9e-102 M Protein of unknown function (DUF3737)
PDLKLNFD_02356 1.4e-220 patB 4.4.1.8 E Aminotransferase, class I
PDLKLNFD_02357 1e-102 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PDLKLNFD_02358 1.7e-62
PDLKLNFD_02359 2.4e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDLKLNFD_02360 5.8e-95 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PDLKLNFD_02361 6.1e-76 T Belongs to the universal stress protein A family
PDLKLNFD_02362 3.4e-35
PDLKLNFD_02363 1.7e-93 Z012_04635 K Helix-turn-helix XRE-family like proteins
PDLKLNFD_02364 1.5e-76 EGP Major facilitator Superfamily
PDLKLNFD_02365 9.3e-24 EGP Major facilitator Superfamily
PDLKLNFD_02366 5.7e-83 GM NAD(P)H-binding
PDLKLNFD_02367 2.1e-140 EGP Major Facilitator Superfamily
PDLKLNFD_02368 2e-139 akr5f 1.1.1.346 S reductase
PDLKLNFD_02369 3.9e-132 C Aldo keto reductase
PDLKLNFD_02370 2.2e-115 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKLNFD_02371 2e-10 adhR K helix_turn_helix, mercury resistance
PDLKLNFD_02372 1.8e-25 fldA C Flavodoxin
PDLKLNFD_02374 2e-78 K Transcriptional regulator
PDLKLNFD_02375 8.3e-109 akr5f 1.1.1.346 S reductase
PDLKLNFD_02376 1.6e-85 GM NAD(P)H-binding
PDLKLNFD_02377 7.3e-94 glcU U sugar transport
PDLKLNFD_02378 2.3e-126 IQ reductase
PDLKLNFD_02379 8e-75 darA C Flavodoxin
PDLKLNFD_02380 6.7e-83 yiiE S Protein of unknown function (DUF1211)
PDLKLNFD_02381 4.7e-141 aRA11 1.1.1.346 S reductase
PDLKLNFD_02382 1.4e-150 IQ Enoyl-(Acyl carrier protein) reductase
PDLKLNFD_02383 1.5e-194 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PDLKLNFD_02384 1e-102 GM NAD(P)H-binding
PDLKLNFD_02385 2.8e-157 K LysR substrate binding domain
PDLKLNFD_02386 9.5e-68 S Domain of unknown function (DUF4440)
PDLKLNFD_02387 4.4e-112 pgm8 G Histidine phosphatase superfamily (branch 1)
PDLKLNFD_02388 2.4e-47
PDLKLNFD_02389 3.2e-37
PDLKLNFD_02390 2.5e-86 yvbK 3.1.3.25 K GNAT family
PDLKLNFD_02391 1.3e-84
PDLKLNFD_02392 2.2e-111 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDLKLNFD_02393 8.4e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDLKLNFD_02394 2.2e-100 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDLKLNFD_02395 8e-117 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDLKLNFD_02397 1.3e-120 macB V ABC transporter, ATP-binding protein
PDLKLNFD_02398 0.0 ylbB V ABC transporter permease
PDLKLNFD_02399 3e-237 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDLKLNFD_02400 4.4e-79 K transcriptional regulator, MerR family
PDLKLNFD_02401 3.2e-76 yphH S Cupin domain
PDLKLNFD_02402 2.5e-55 yphJ 4.1.1.44 S Carboxymuconolactone decarboxylase family
PDLKLNFD_02403 1e-128 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKLNFD_02404 4.7e-211 natB CP ABC-2 family transporter protein
PDLKLNFD_02405 3.6e-168 natA S ABC transporter, ATP-binding protein
PDLKLNFD_02407 4.2e-62
PDLKLNFD_02408 2.5e-53
PDLKLNFD_02409 1.5e-75 mltD CBM50 M PFAM NLP P60 protein
PDLKLNFD_02410 9.6e-285 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
PDLKLNFD_02411 1.8e-27
PDLKLNFD_02412 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PDLKLNFD_02413 2.4e-116 luxT K Bacterial regulatory proteins, tetR family
PDLKLNFD_02414 3.5e-88 K Winged helix DNA-binding domain
PDLKLNFD_02415 1.3e-136 T Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PDLKLNFD_02416 1.7e-129 S WxL domain surface cell wall-binding
PDLKLNFD_02417 1.5e-186 S Bacterial protein of unknown function (DUF916)
PDLKLNFD_02418 0.0
PDLKLNFD_02419 6e-161 ypuA S Protein of unknown function (DUF1002)
PDLKLNFD_02420 5.5e-50 yvlA
PDLKLNFD_02421 1.2e-95 K transcriptional regulator
PDLKLNFD_02422 3e-90 ymdB S Macro domain protein
PDLKLNFD_02423 1.5e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDLKLNFD_02424 2.9e-24 S Protein of unknown function (DUF1093)
PDLKLNFD_02425 2e-77 S Threonine/Serine exporter, ThrE
PDLKLNFD_02426 9.2e-133 thrE S Putative threonine/serine exporter
PDLKLNFD_02427 5.2e-164 yvgN C Aldo keto reductase
PDLKLNFD_02428 3.8e-152 ywkB S Membrane transport protein
PDLKLNFD_02429 5.6e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PDLKLNFD_02430 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
PDLKLNFD_02431 4.5e-85 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PDLKLNFD_02432 3.8e-76 M1-874 K Domain of unknown function (DUF1836)
PDLKLNFD_02433 6.8e-181 D Alpha beta
PDLKLNFD_02434 7.7e-214 mdtG EGP Major facilitator Superfamily
PDLKLNFD_02435 5.2e-251 U Belongs to the purine-cytosine permease (2.A.39) family
PDLKLNFD_02436 9.4e-65 ycgX S Protein of unknown function (DUF1398)
PDLKLNFD_02437 4.2e-49
PDLKLNFD_02438 3.4e-25
PDLKLNFD_02439 9.7e-248 lmrB EGP Major facilitator Superfamily
PDLKLNFD_02440 7.7e-73 S COG NOG18757 non supervised orthologous group
PDLKLNFD_02441 7.4e-40
PDLKLNFD_02442 9.4e-74 copR K Copper transport repressor CopY TcrY
PDLKLNFD_02443 0.0 copB 3.6.3.4 P P-type ATPase
PDLKLNFD_02444 1.3e-190 pva2 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PDLKLNFD_02445 1.4e-111 S VIT family
PDLKLNFD_02446 1.8e-119 S membrane
PDLKLNFD_02447 1.6e-158 EG EamA-like transporter family
PDLKLNFD_02448 1.3e-81 elaA S GNAT family
PDLKLNFD_02449 1.1e-115 GM NmrA-like family
PDLKLNFD_02450 2.1e-14
PDLKLNFD_02451 7e-56
PDLKLNFD_02452 1.2e-79 hsp3 O Belongs to the small heat shock protein (HSP20) family
PDLKLNFD_02453 4.3e-86
PDLKLNFD_02454 1.9e-62
PDLKLNFD_02455 4.1e-214 mutY L A G-specific adenine glycosylase
PDLKLNFD_02456 4e-53
PDLKLNFD_02457 1.7e-66 yeaO S Protein of unknown function, DUF488
PDLKLNFD_02458 7e-71 spx4 1.20.4.1 P ArsC family
PDLKLNFD_02459 9.2e-66 K Winged helix DNA-binding domain
PDLKLNFD_02460 4.8e-162 azoB GM NmrA-like family
PDLKLNFD_02461 7.3e-86 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
PDLKLNFD_02462 1.8e-167 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKLNFD_02463 6.8e-251 cycA E Amino acid permease
PDLKLNFD_02464 1.2e-255 nhaC C Na H antiporter NhaC
PDLKLNFD_02465 6.1e-27 3.2.2.10 S Belongs to the LOG family
PDLKLNFD_02466 6.3e-199 frlB M SIS domain
PDLKLNFD_02467 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PDLKLNFD_02468 1.4e-220 S Uncharacterized protein conserved in bacteria (DUF2325)
PDLKLNFD_02469 9.7e-126 yyaQ S YjbR
PDLKLNFD_02471 0.0 cadA P P-type ATPase
PDLKLNFD_02472 1.1e-306 U Belongs to the BCCT transporter (TC 2.A.15) family
PDLKLNFD_02473 6.2e-122 E GDSL-like Lipase/Acylhydrolase family
PDLKLNFD_02474 1.4e-77
PDLKLNFD_02475 8.1e-38 S Bacteriocin-protection, YdeI or OmpD-Associated
PDLKLNFD_02476 3.3e-97 FG HIT domain
PDLKLNFD_02477 5.9e-174 S Aldo keto reductase
PDLKLNFD_02478 5.1e-53 yitW S Pfam:DUF59
PDLKLNFD_02479 6.7e-161 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDLKLNFD_02480 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PDLKLNFD_02481 3.2e-194 blaA6 V Beta-lactamase
PDLKLNFD_02482 6.2e-96 V VanZ like family
PDLKLNFD_02483 2e-106 3.2.2.20 K acetyltransferase
PDLKLNFD_02484 7.8e-296 S ABC transporter, ATP-binding protein
PDLKLNFD_02485 4.7e-216 2.7.7.65 T diguanylate cyclase
PDLKLNFD_02486 5.1e-34
PDLKLNFD_02487 2e-35
PDLKLNFD_02488 6.6e-81 K AsnC family
PDLKLNFD_02489 1.3e-170 ykfC 3.4.14.13 M NlpC/P60 family
PDLKLNFD_02490 6.6e-159 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKLNFD_02492 3.8e-23
PDLKLNFD_02493 4.6e-137 3.6.1.13, 3.6.1.55 F NUDIX domain
PDLKLNFD_02494 2.2e-213 yceI EGP Major facilitator Superfamily
PDLKLNFD_02495 4.2e-47
PDLKLNFD_02496 7.7e-92 S ECF-type riboflavin transporter, S component
PDLKLNFD_02498 1.5e-169 EG EamA-like transporter family
PDLKLNFD_02499 2.3e-38 gcvR T Belongs to the UPF0237 family
PDLKLNFD_02500 3e-243 XK27_08635 S UPF0210 protein
PDLKLNFD_02501 1.6e-134 K response regulator
PDLKLNFD_02502 2.9e-287 yclK 2.7.13.3 T Histidine kinase
PDLKLNFD_02503 1.2e-216 ywbD 2.1.1.191 J S-adenosylmethionine-dependent methyltransferase
PDLKLNFD_02504 9.7e-155 glcU U sugar transport
PDLKLNFD_02505 1e-259 pgi 5.3.1.9 G Belongs to the GPI family
PDLKLNFD_02506 6.8e-24
PDLKLNFD_02507 0.0 macB3 V ABC transporter, ATP-binding protein
PDLKLNFD_02508 2.9e-274 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PDLKLNFD_02509 0.0 msbA2 3.6.3.44 P ABC transporter transmembrane region
PDLKLNFD_02510 1.6e-16
PDLKLNFD_02511 1.9e-18
PDLKLNFD_02512 1.6e-16
PDLKLNFD_02513 1.6e-16
PDLKLNFD_02514 1.6e-16
PDLKLNFD_02515 5.2e-15
PDLKLNFD_02516 7.2e-17
PDLKLNFD_02517 2.7e-16
PDLKLNFD_02518 4.2e-308 M MucBP domain
PDLKLNFD_02519 0.0 bztC D nuclear chromosome segregation
PDLKLNFD_02520 7.3e-83 K MarR family
PDLKLNFD_02521 1.4e-43
PDLKLNFD_02522 2e-38
PDLKLNFD_02523 1.1e-225 sip L Belongs to the 'phage' integrase family
PDLKLNFD_02524 5.7e-14 K Cro/C1-type HTH DNA-binding domain
PDLKLNFD_02526 3.8e-08
PDLKLNFD_02527 2.3e-34
PDLKLNFD_02528 7e-147 L DNA replication protein
PDLKLNFD_02529 8.8e-220 S Virulence-associated protein E
PDLKLNFD_02530 2.2e-87
PDLKLNFD_02531 6.6e-27
PDLKLNFD_02532 7.3e-53 S head-tail joining protein
PDLKLNFD_02533 6.3e-69 L Phage-associated protein
PDLKLNFD_02534 1e-81 terS L overlaps another CDS with the same product name
PDLKLNFD_02535 0.0 terL S overlaps another CDS with the same product name
PDLKLNFD_02537 7.7e-205 S Phage portal protein
PDLKLNFD_02538 5.6e-278 S Caudovirus prohead serine protease
PDLKLNFD_02539 9.5e-40 S Phage gp6-like head-tail connector protein
PDLKLNFD_02540 1.1e-52
PDLKLNFD_02541 1.6e-45 gepA S Protein of unknown function (DUF4065)
PDLKLNFD_02542 4.3e-13
PDLKLNFD_02544 8.9e-30
PDLKLNFD_02546 4.3e-219 int L Belongs to the 'phage' integrase family
PDLKLNFD_02547 2.2e-115 K SIR2-like domain
PDLKLNFD_02552 3.1e-38 M Host cell surface-exposed lipoprotein
PDLKLNFD_02553 9.4e-10 E peptidase
PDLKLNFD_02554 1.3e-16 K sequence-specific DNA binding
PDLKLNFD_02559 1.3e-13 S Hypothetical protein (DUF2513)
PDLKLNFD_02560 1.5e-17 K Cro/C1-type HTH DNA-binding domain
PDLKLNFD_02564 4.5e-54
PDLKLNFD_02565 4.4e-86
PDLKLNFD_02567 6.4e-26
PDLKLNFD_02568 1.4e-12 S Domain of unknown function (DUF1508)
PDLKLNFD_02569 7.9e-72
PDLKLNFD_02570 4.9e-149 recT L RecT family
PDLKLNFD_02571 4e-136 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
PDLKLNFD_02572 1.4e-30 3.1.3.16 L DnaD domain protein
PDLKLNFD_02573 1.3e-151 S IstB-like ATP binding protein
PDLKLNFD_02575 1.8e-61 ps308 K AntA/AntB antirepressor
PDLKLNFD_02576 9.6e-65
PDLKLNFD_02577 2.4e-65 rusA 3.1.22.4 L Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PDLKLNFD_02579 1.9e-80 arpU S Phage transcriptional regulator, ArpU family
PDLKLNFD_02582 2.1e-79
PDLKLNFD_02583 2.3e-10
PDLKLNFD_02584 4e-18
PDLKLNFD_02585 2e-29
PDLKLNFD_02587 4.8e-22 S Psort location Cytoplasmic, score
PDLKLNFD_02588 2.1e-64 S Terminase small subunit
PDLKLNFD_02589 1e-134 ps334 S Terminase-like family
PDLKLNFD_02590 5.7e-271 S Phage portal protein, SPP1 Gp6-like
PDLKLNFD_02591 1.8e-130 S Phage Mu protein F like protein
PDLKLNFD_02592 3.1e-60 S Domain of unknown function (DUF4355)
PDLKLNFD_02593 1.5e-43
PDLKLNFD_02594 3.3e-171 S Phage major capsid protein E
PDLKLNFD_02595 9.6e-51 S Phage gp6-like head-tail connector protein
PDLKLNFD_02596 1.3e-38
PDLKLNFD_02597 3.8e-55
PDLKLNFD_02598 2.6e-46
PDLKLNFD_02599 5.4e-97
PDLKLNFD_02600 6.9e-71 S Phage tail assembly chaperone protein, TAC
PDLKLNFD_02602 9.9e-250 D NLP P60 protein
PDLKLNFD_02604 3.6e-139 S Phage tail protein
PDLKLNFD_02605 2.3e-170 M Prophage endopeptidase tail
PDLKLNFD_02608 3.4e-82 S Calcineurin-like phosphoesterase
PDLKLNFD_02610 9e-169 M hydrolase, family 25
PDLKLNFD_02611 1.6e-48
PDLKLNFD_02612 1.1e-33 hol S Bacteriophage holin
PDLKLNFD_02613 1.8e-15
PDLKLNFD_02614 1.9e-65 K IrrE N-terminal-like domain
PDLKLNFD_02616 3.8e-135 yxkH G Polysaccharide deacetylase
PDLKLNFD_02617 3.3e-65 S Protein of unknown function (DUF1093)
PDLKLNFD_02618 0.0 ycfI V ABC transporter, ATP-binding protein
PDLKLNFD_02619 0.0 yfiC V ABC transporter
PDLKLNFD_02620 2.3e-123
PDLKLNFD_02621 1.9e-58
PDLKLNFD_02622 1e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PDLKLNFD_02623 1.4e-29
PDLKLNFD_02624 2e-191 ampC V Beta-lactamase
PDLKLNFD_02625 1.1e-194 manA 5.3.1.8 G mannose-6-phosphate isomerase
PDLKLNFD_02626 4.2e-135 cobQ S glutamine amidotransferase
PDLKLNFD_02627 1.5e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PDLKLNFD_02628 9.3e-109 tdk 2.7.1.21 F thymidine kinase
PDLKLNFD_02629 1.2e-197 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDLKLNFD_02630 1.1e-158 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDLKLNFD_02631 2e-191 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDLKLNFD_02632 8.3e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDLKLNFD_02633 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDLKLNFD_02634 5e-232 pyrP F Permease
PDLKLNFD_02635 6.5e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PDLKLNFD_02636 2.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDLKLNFD_02637 6e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDLKLNFD_02638 1.8e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDLKLNFD_02639 2.7e-280 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDLKLNFD_02640 2.3e-165 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDLKLNFD_02641 2.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDLKLNFD_02642 1.1e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDLKLNFD_02643 4.4e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDLKLNFD_02644 2.1e-102 J Acetyltransferase (GNAT) domain
PDLKLNFD_02645 2.7e-180 mbl D Cell shape determining protein MreB Mrl
PDLKLNFD_02646 2.3e-43 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PDLKLNFD_02647 3.3e-33 S Protein of unknown function (DUF2969)
PDLKLNFD_02648 9.3e-220 rodA D Belongs to the SEDS family
PDLKLNFD_02649 3.6e-48 gcsH2 E glycine cleavage
PDLKLNFD_02650 4e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDLKLNFD_02651 1.4e-111 metI U ABC transporter permease
PDLKLNFD_02652 1.1e-147 metQ M Belongs to the nlpA lipoprotein family
PDLKLNFD_02653 2.8e-168 hicD1 1.1.1.27 C Belongs to the LDH MDH superfamily
PDLKLNFD_02654 1.6e-177 S Protein of unknown function (DUF2785)
PDLKLNFD_02655 3.6e-188 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PDLKLNFD_02656 1.6e-213 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDLKLNFD_02657 2.3e-295 glpQ3 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PDLKLNFD_02658 3.3e-161 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PDLKLNFD_02659 3.1e-201 bla2 3.5.2.6 V Beta-lactamase enzyme family
PDLKLNFD_02660 6.2e-82 usp6 T universal stress protein
PDLKLNFD_02661 1.5e-38
PDLKLNFD_02662 8e-238 rarA L recombination factor protein RarA
PDLKLNFD_02663 0.0 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PDLKLNFD_02664 5.9e-95 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PDLKLNFD_02665 6e-66 2.7.1.191 G PTS system sorbose subfamily IIB component
PDLKLNFD_02666 3.6e-103 G PTS system sorbose-specific iic component
PDLKLNFD_02667 2.7e-104 G PTS system mannose fructose sorbose family IID component
PDLKLNFD_02668 9.2e-42 2.7.1.191 G PTS system fructose IIA component
PDLKLNFD_02669 5.1e-232 malL 3.2.1.10 GH13 G COG0366 Glycosidases
PDLKLNFD_02670 3.3e-43 czrA K Helix-turn-helix domain
PDLKLNFD_02671 9.1e-110 S Protein of unknown function (DUF1648)
PDLKLNFD_02672 3.3e-80 yueI S Protein of unknown function (DUF1694)
PDLKLNFD_02673 1.1e-112 yktB S Belongs to the UPF0637 family
PDLKLNFD_02674 9.1e-107 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDLKLNFD_02675 5e-81 ytsP 1.8.4.14 T GAF domain-containing protein
PDLKLNFD_02676 0.0 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDLKLNFD_02677 1.7e-218 iscS2 2.8.1.7 E Aminotransferase class V
PDLKLNFD_02678 1.9e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDLKLNFD_02679 8e-235 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PDLKLNFD_02680 3e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDLKLNFD_02681 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDLKLNFD_02682 4.7e-249 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDLKLNFD_02683 3e-116 radC L DNA repair protein
PDLKLNFD_02684 2.8e-161 mreB D cell shape determining protein MreB
PDLKLNFD_02685 9.9e-144 mreC M Involved in formation and maintenance of cell shape
PDLKLNFD_02686 1.2e-88 mreD M rod shape-determining protein MreD
PDLKLNFD_02687 1.1e-116 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PDLKLNFD_02688 1.2e-146 minD D Belongs to the ParA family
PDLKLNFD_02689 4.6e-109 glnP P ABC transporter permease
PDLKLNFD_02690 2.5e-115 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDLKLNFD_02691 1.5e-155 aatB ET ABC transporter substrate-binding protein
PDLKLNFD_02692 1.9e-30
PDLKLNFD_02694 8e-146 licT2 K CAT RNA binding domain
PDLKLNFD_02695 3.8e-292 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKLNFD_02696 0.0 bglF 2.7.1.193, 2.7.1.211 G phosphotransferase system
PDLKLNFD_02697 2.6e-64 S Protein of unknown function (DUF1093)
PDLKLNFD_02698 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PDLKLNFD_02699 4.9e-233 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PDLKLNFD_02700 1.4e-47 ulaB 2.7.1.194, 2.7.1.200 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
PDLKLNFD_02701 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDLKLNFD_02702 1.5e-207 S Membrane
PDLKLNFD_02703 1.1e-43 S Protein of unknown function (DUF3781)
PDLKLNFD_02704 1e-107 ydeA S intracellular protease amidase
PDLKLNFD_02705 2.2e-41 K HxlR-like helix-turn-helix
PDLKLNFD_02706 3.3e-66
PDLKLNFD_02707 1e-64 V ABC transporter
PDLKLNFD_02708 1.5e-50 K Helix-turn-helix domain
PDLKLNFD_02709 5.8e-205 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PDLKLNFD_02710 4.3e-99 acmD 3.2.1.17 NU Bacterial SH3 domain
PDLKLNFD_02711 4.6e-104 M ErfK YbiS YcfS YnhG
PDLKLNFD_02712 4.6e-112 akr5f 1.1.1.346 S reductase
PDLKLNFD_02713 3.7e-108 GM NAD(P)H-binding
PDLKLNFD_02714 2.7e-76 3.5.4.1 GM SnoaL-like domain
PDLKLNFD_02715 3.6e-258 qacA EGP Fungal trichothecene efflux pump (TRI12)
PDLKLNFD_02716 9.2e-65 S Domain of unknown function (DUF4440)
PDLKLNFD_02717 2.4e-104 K Bacterial regulatory proteins, tetR family
PDLKLNFD_02719 6.8e-33 L transposase activity
PDLKLNFD_02721 8.8e-40
PDLKLNFD_02722 1.2e-32 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDLKLNFD_02724 1.2e-25 2.7.7.49 L Reverse transcriptase (RNA-dependent DNA polymerase)
PDLKLNFD_02725 1.3e-135 L Phage integrase SAM-like domain
PDLKLNFD_02726 3.5e-37 3.1.3.16 S Protein of unknown function (DUF1643)
PDLKLNFD_02728 8.5e-37
PDLKLNFD_02729 1.3e-76
PDLKLNFD_02730 1.6e-10 S Mor transcription activator family
PDLKLNFD_02731 2.3e-29
PDLKLNFD_02732 5.9e-23 S Mor transcription activator family
PDLKLNFD_02733 2.1e-16
PDLKLNFD_02734 4.3e-13 S Mor transcription activator family
PDLKLNFD_02736 3e-43 L Transposase and inactivated derivatives, IS30 family
PDLKLNFD_02737 2.1e-198 S Membrane
PDLKLNFD_02738 3.1e-259 S Domain of unknown function DUF87
PDLKLNFD_02739 1.9e-56 dptG
PDLKLNFD_02740 6.8e-72 dptF L COG0433 Predicted ATPase
PDLKLNFD_02741 9.8e-39 L Transposase and inactivated derivatives
PDLKLNFD_02742 4.3e-155 L Integrase core domain
PDLKLNFD_02743 4.4e-143 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKLNFD_02744 2.3e-184 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PDLKLNFD_02745 0.0 glpQ 3.1.4.46 C phosphodiesterase
PDLKLNFD_02746 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDLKLNFD_02747 3.9e-75 yjcF S Acetyltransferase (GNAT) domain
PDLKLNFD_02748 3.9e-285 M domain protein
PDLKLNFD_02749 0.0 ydgH S MMPL family
PDLKLNFD_02750 3.2e-112 S Protein of unknown function (DUF1211)
PDLKLNFD_02751 3.7e-34
PDLKLNFD_02752 2.2e-184 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDLKLNFD_02753 8e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDLKLNFD_02754 8.6e-98 J glyoxalase III activity
PDLKLNFD_02755 1.4e-147 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKLNFD_02756 5.9e-91 rmeB K transcriptional regulator, MerR family
PDLKLNFD_02757 2.1e-55 S Domain of unknown function (DU1801)
PDLKLNFD_02758 1.7e-165 corA P CorA-like Mg2+ transporter protein
PDLKLNFD_02759 4.6e-216 ysaA V RDD family
PDLKLNFD_02760 8.5e-164 hisK 3.1.3.15 E Histidinol phosphate phosphatase, HisJ
PDLKLNFD_02761 3.6e-213 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PDLKLNFD_02762 4.3e-118 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PDLKLNFD_02763 7.8e-233 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDLKLNFD_02764 7.9e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PDLKLNFD_02765 4.1e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDLKLNFD_02766 3.5e-129 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PDLKLNFD_02767 3.8e-134 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDLKLNFD_02768 3.8e-59 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PDLKLNFD_02769 7.6e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PDLKLNFD_02770 3.3e-200 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDLKLNFD_02771 1.2e-84 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDLKLNFD_02772 4.8e-137 terC P membrane
PDLKLNFD_02773 2.7e-157 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PDLKLNFD_02774 2.5e-258 npr 1.11.1.1 C NADH oxidase
PDLKLNFD_02775 6.4e-137 XK27_08845 S ABC transporter, ATP-binding protein
PDLKLNFD_02776 8.7e-154 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PDLKLNFD_02777 1.4e-176 XK27_08835 S ABC transporter
PDLKLNFD_02778 1.1e-164 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PDLKLNFD_02779 2.6e-244 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PDLKLNFD_02780 1.2e-230 hom1 1.1.1.3 E Homoserine dehydrogenase
PDLKLNFD_02781 5e-162 degV S Uncharacterised protein, DegV family COG1307
PDLKLNFD_02782 9.6e-191 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDLKLNFD_02783 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PDLKLNFD_02784 5.1e-25
PDLKLNFD_02785 1.5e-82 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDLKLNFD_02786 1.3e-72
PDLKLNFD_02787 0.0 S Bacterial membrane protein YfhO
PDLKLNFD_02788 8.7e-90
PDLKLNFD_02789 4.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDLKLNFD_02790 2.1e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDLKLNFD_02791 6.3e-201 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDLKLNFD_02792 3.3e-227 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDLKLNFD_02793 2.8e-29 yajC U Preprotein translocase
PDLKLNFD_02794 5.3e-217 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDLKLNFD_02795 7e-178 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PDLKLNFD_02796 9.3e-245 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDLKLNFD_02797 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDLKLNFD_02798 2.4e-43 yrzL S Belongs to the UPF0297 family
PDLKLNFD_02799 7.3e-74 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDLKLNFD_02800 1.6e-48 yrzB S Belongs to the UPF0473 family
PDLKLNFD_02801 2.7e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PDLKLNFD_02802 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDLKLNFD_02803 3.3e-52 trxA O Belongs to the thioredoxin family
PDLKLNFD_02804 7.6e-126 yslB S Protein of unknown function (DUF2507)
PDLKLNFD_02805 4.1e-150 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDLKLNFD_02806 1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDLKLNFD_02807 9.5e-97 S Phosphoesterase
PDLKLNFD_02808 6.5e-87 ykuL S (CBS) domain
PDLKLNFD_02809 2.6e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDLKLNFD_02810 3.7e-226 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDLKLNFD_02811 2.6e-158 ykuT M mechanosensitive ion channel
PDLKLNFD_02812 1.9e-23 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PDLKLNFD_02813 2.8e-56
PDLKLNFD_02814 1.1e-80 K helix_turn_helix, mercury resistance
PDLKLNFD_02815 1.7e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDLKLNFD_02816 1.2e-180 ccpA K catabolite control protein A
PDLKLNFD_02817 5.8e-163 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
PDLKLNFD_02818 5.4e-50 S DsrE/DsrF-like family
PDLKLNFD_02819 8.3e-131 yebC K Transcriptional regulatory protein
PDLKLNFD_02820 4.8e-160 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDLKLNFD_02821 5.6e-175 comGA NU Type II IV secretion system protein
PDLKLNFD_02822 9.6e-189 comGB NU type II secretion system
PDLKLNFD_02823 5.5e-43 comGC U competence protein ComGC
PDLKLNFD_02824 3.2e-83 gspG NU general secretion pathway protein
PDLKLNFD_02825 8.6e-20
PDLKLNFD_02826 4.5e-88 S Prokaryotic N-terminal methylation motif
PDLKLNFD_02828 1.2e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
PDLKLNFD_02829 7e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDLKLNFD_02830 2.1e-252 cycA E Amino acid permease
PDLKLNFD_02831 4.4e-117 S Calcineurin-like phosphoesterase
PDLKLNFD_02832 1.3e-270 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PDLKLNFD_02833 1.5e-80 yutD S Protein of unknown function (DUF1027)
PDLKLNFD_02834 1.5e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDLKLNFD_02835 4.6e-117 S Protein of unknown function (DUF1461)
PDLKLNFD_02836 1.9e-118 dedA S SNARE-like domain protein
PDLKLNFD_02837 5.5e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDLKLNFD_02838 1.6e-75 yugI 5.3.1.9 J general stress protein
PDLKLNFD_02839 5.1e-63
PDLKLNFD_02842 1.5e-42 S COG NOG38524 non supervised orthologous group
PDLKLNFD_02848 5.1e-08
PDLKLNFD_02854 2.8e-91 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
PDLKLNFD_02855 6.8e-182 P secondary active sulfate transmembrane transporter activity
PDLKLNFD_02856 1.4e-95
PDLKLNFD_02857 2e-94 K Acetyltransferase (GNAT) domain
PDLKLNFD_02858 3.9e-156 T Calcineurin-like phosphoesterase superfamily domain
PDLKLNFD_02860 3.7e-230 mntH P H( )-stimulated, divalent metal cation uptake system
PDLKLNFD_02861 9e-189 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PDLKLNFD_02862 1.2e-255 mmuP E amino acid
PDLKLNFD_02863 4.9e-168 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PDLKLNFD_02864 9.3e-294 tagE1 2.4.1.52 GT4 M Glycosyl transferases group 1
PDLKLNFD_02865 7.6e-33 E Zn peptidase
PDLKLNFD_02866 2.5e-26 ps115 K Helix-turn-helix XRE-family like proteins
PDLKLNFD_02868 3.3e-57 pbpX2 V Beta-lactamase
PDLKLNFD_02869 3.8e-38 GT2 V Glycosyl transferase, family 2
PDLKLNFD_02870 1e-53 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDLKLNFD_02871 1.5e-36 2.3.1.79 S Bacterial transferase hexapeptide (six repeats)
PDLKLNFD_02872 2.6e-134 rgpAc GT4 M Domain of unknown function (DUF1972)
PDLKLNFD_02873 1.2e-58 G Glycosyltransferase Family 4
PDLKLNFD_02874 1.3e-57
PDLKLNFD_02876 2.2e-43 3.2.1.1 GH13 G PFAM glycoside hydrolase family 39
PDLKLNFD_02877 1.2e-147 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDLKLNFD_02878 4.6e-108 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDLKLNFD_02879 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDLKLNFD_02880 2.5e-155 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDLKLNFD_02881 9.7e-153 cps2I S Psort location CytoplasmicMembrane, score
PDLKLNFD_02882 6.2e-100 L Integrase
PDLKLNFD_02883 1.6e-127 epsB M biosynthesis protein
PDLKLNFD_02884 2.4e-130 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PDLKLNFD_02885 3.8e-142 ywqE 3.1.3.48 GM PHP domain protein
PDLKLNFD_02886 5.9e-177 cps2D 5.1.3.2 M RmlD substrate binding domain
PDLKLNFD_02887 3.5e-123 tuaA M Bacterial sugar transferase
PDLKLNFD_02888 2.7e-45 lsgF M Glycosyl transferase family 2
PDLKLNFD_02889 4e-37 M Pfam:DUF1792
PDLKLNFD_02890 2e-140 M Teichoic acid biosynthesis protein
PDLKLNFD_02891 1.7e-89 V Glycosyl transferase, family 2
PDLKLNFD_02892 3.4e-19 S EpsG family
PDLKLNFD_02893 3.4e-83 GT2 S Glycosyl transferase family 2
PDLKLNFD_02894 6e-192 cps2I S Psort location CytoplasmicMembrane, score
PDLKLNFD_02895 7.9e-17 relB L bacterial-type proximal promoter sequence-specific DNA binding
PDLKLNFD_02896 6.5e-133 cps3A S Glycosyltransferase like family 2
PDLKLNFD_02897 8e-179 cps3B S Glycosyltransferase like family 2
PDLKLNFD_02898 1.1e-222 glf 5.4.99.9 M UDP-galactopyranose mutase
PDLKLNFD_02899 2.2e-204 cps3D
PDLKLNFD_02900 4.8e-111 cps3E
PDLKLNFD_02901 2.7e-163 cps3F
PDLKLNFD_02902 1.3e-207 cps3H
PDLKLNFD_02903 4.9e-204 cps3I G Acyltransferase family
PDLKLNFD_02904 8.8e-147 cps1D M Domain of unknown function (DUF4422)
PDLKLNFD_02905 6.7e-136 K helix_turn_helix, arabinose operon control protein
PDLKLNFD_02906 1.1e-306 M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
PDLKLNFD_02907 9.6e-74 K helix_turn_helix multiple antibiotic resistance protein
PDLKLNFD_02908 7e-259 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
PDLKLNFD_02909 3.2e-121 rfbP M Bacterial sugar transferase
PDLKLNFD_02910 1.1e-52
PDLKLNFD_02911 7.3e-33 S Protein of unknown function (DUF2922)
PDLKLNFD_02912 7e-30
PDLKLNFD_02913 1.3e-25
PDLKLNFD_02914 1.5e-100 K DNA-templated transcription, initiation
PDLKLNFD_02915 3.9e-125
PDLKLNFD_02916 2.2e-140 recX 2.4.1.337 GT4 S Regulatory protein RecX
PDLKLNFD_02917 4.1e-106 ygaC J Belongs to the UPF0374 family
PDLKLNFD_02918 1.3e-134 cwlO M NlpC/P60 family
PDLKLNFD_02919 1e-47 K sequence-specific DNA binding
PDLKLNFD_02920 1.3e-27 S Antitoxin component of a toxin-antitoxin (TA) module
PDLKLNFD_02921 1.3e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDLKLNFD_02922 9.3e-188 yueF S AI-2E family transporter
PDLKLNFD_02923 3.7e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PDLKLNFD_02924 9.5e-213 gntP EG Gluconate
PDLKLNFD_02925 7.9e-293 gntK 2.7.1.12, 2.7.1.16, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
PDLKLNFD_02926 4.3e-169 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
PDLKLNFD_02927 8.3e-254 gor 1.8.1.7 C Glutathione reductase
PDLKLNFD_02928 2e-307 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDLKLNFD_02929 5.9e-274
PDLKLNFD_02930 4.2e-197 M MucBP domain
PDLKLNFD_02931 7.1e-161 lysR5 K LysR substrate binding domain
PDLKLNFD_02932 5.5e-126 yxaA S membrane transporter protein
PDLKLNFD_02933 3.2e-57 ywjH S Protein of unknown function (DUF1634)
PDLKLNFD_02934 1.5e-308 oppA E ABC transporter, substratebinding protein
PDLKLNFD_02935 2.3e-165 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDLKLNFD_02936 1.1e-189 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDLKLNFD_02937 9.2e-203 oppD P Belongs to the ABC transporter superfamily
PDLKLNFD_02938 1.8e-181 oppF P Belongs to the ABC transporter superfamily
PDLKLNFD_02939 1e-63 K Winged helix DNA-binding domain
PDLKLNFD_02940 1.6e-102 L Integrase
PDLKLNFD_02941 0.0 clpE O Belongs to the ClpA ClpB family
PDLKLNFD_02942 6.5e-30
PDLKLNFD_02943 2.7e-39 ptsH G phosphocarrier protein HPR
PDLKLNFD_02944 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDLKLNFD_02945 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PDLKLNFD_02946 6.9e-200 cpoA GT4 M Glycosyltransferase, group 1 family protein
PDLKLNFD_02947 1.7e-188 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDLKLNFD_02948 4.3e-228 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDLKLNFD_02949 7.7e-227 patA 2.6.1.1 E Aminotransferase
PDLKLNFD_02950 1.1e-34 ykuJ S Protein of unknown function (DUF1797)
PDLKLNFD_02951 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDLKLNFD_02952 2.2e-33 L Transposase
PDLKLNFD_02953 0.0 cadA P P-type ATPase
PDLKLNFD_02954 1.9e-167 L Psort location Cytoplasmic, score
PDLKLNFD_02955 1.7e-18
PDLKLNFD_02956 1.4e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDLKLNFD_02957 1.1e-56 arsD S Arsenical resistance operon trans-acting repressor ArsD
PDLKLNFD_02958 2.1e-233 arsB U Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PDLKLNFD_02959 0.0 arsA 3.6.3.16 D Anion-transporting ATPase
PDLKLNFD_02960 2.7e-57 arsR K Helix-turn-helix domain
PDLKLNFD_02961 9.5e-61 L Domain of unknown function (DUF4158)
PDLKLNFD_02962 8.1e-151 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDLKLNFD_02963 4.5e-263 npr 1.11.1.1 C NADH oxidase
PDLKLNFD_02964 4.1e-68 S pyridoxamine 5-phosphate
PDLKLNFD_02965 1e-52 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDLKLNFD_02966 1.3e-53 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PDLKLNFD_02968 4.5e-11
PDLKLNFD_02969 6.9e-10
PDLKLNFD_02970 1.4e-41
PDLKLNFD_02971 1.2e-192 L Psort location Cytoplasmic, score
PDLKLNFD_02972 8.2e-34
PDLKLNFD_02973 1.5e-286 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PDLKLNFD_02974 0.0 L MobA MobL family protein
PDLKLNFD_02975 2.5e-27
PDLKLNFD_02976 8.9e-41
PDLKLNFD_02977 8.3e-117 S protein conserved in bacteria
PDLKLNFD_02978 5.9e-28
PDLKLNFD_02979 9.6e-43 relB L Addiction module antitoxin, RelB DinJ family
PDLKLNFD_02980 1.6e-170 repA S Replication initiator protein A
PDLKLNFD_02981 2.9e-35
PDLKLNFD_02982 4e-150 D CobQ CobB MinD ParA nucleotide binding domain protein
PDLKLNFD_02983 2.4e-104 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PDLKLNFD_02985 2.6e-54 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PDLKLNFD_02986 1.7e-93 L Integrase core domain
PDLKLNFD_02987 1.8e-92 ogt 2.1.1.63 L Methyltransferase
PDLKLNFD_02988 4.5e-45 lytE M LysM domain
PDLKLNFD_02990 6.9e-268 tagE6 2.4.1.52 GT4 M Glycosyl transferases group 1
PDLKLNFD_02991 1e-295 tagE5 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
PDLKLNFD_02992 3.7e-151 rlrG K Transcriptional regulator
PDLKLNFD_02993 9.3e-173 S Conserved hypothetical protein 698
PDLKLNFD_02994 3.4e-100 rimL J Acetyltransferase (GNAT) domain
PDLKLNFD_02995 2e-75 S Domain of unknown function (DUF4811)
PDLKLNFD_02996 2.4e-270 lmrB EGP Major facilitator Superfamily
PDLKLNFD_02997 1.3e-125 hadL 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDLKLNFD_02998 3.3e-60 ynfM EGP Major facilitator Superfamily
PDLKLNFD_02999 6.6e-123 ynfM EGP Major facilitator Superfamily
PDLKLNFD_03000 8.5e-257 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
PDLKLNFD_03001 1.2e-155 mleP3 S Membrane transport protein
PDLKLNFD_03002 1.6e-85 S Membrane
PDLKLNFD_03003 9.1e-188 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDLKLNFD_03004 3.1e-98 1.5.1.3 H RibD C-terminal domain
PDLKLNFD_03005 4.2e-186 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PDLKLNFD_03006 3.7e-91 2.7.7.65 T phosphorelay sensor kinase activity
PDLKLNFD_03007 2.8e-120 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PDLKLNFD_03008 5.2e-174 hrtB V ABC transporter permease
PDLKLNFD_03009 6.6e-95 S Protein of unknown function (DUF1440)
PDLKLNFD_03010 1.7e-227 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDLKLNFD_03011 9.8e-39 KT helix_turn_helix, mercury resistance
PDLKLNFD_03012 2.3e-99 KT helix_turn_helix, mercury resistance
PDLKLNFD_03013 1.6e-115 S Protein of unknown function (DUF554)
PDLKLNFD_03014 3.6e-168 S Polyphosphate kinase 2 (PPK2)
PDLKLNFD_03015 2.5e-98 drgA C Nitroreductase family
PDLKLNFD_03016 3.1e-178 iunH2 3.2.2.1 F nucleoside hydrolase
PDLKLNFD_03017 1.7e-146 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDLKLNFD_03018 8.8e-123 S Sucrose-6F-phosphate phosphohydrolase
PDLKLNFD_03019 2.3e-157 ccpB 5.1.1.1 K lacI family
PDLKLNFD_03020 2.2e-114 K Helix-turn-helix domain, rpiR family
PDLKLNFD_03021 1.3e-176 S Oxidoreductase family, NAD-binding Rossmann fold
PDLKLNFD_03022 1.1e-197 yhhX 1.1.1.371 S Oxidoreductase family, C-terminal alpha/beta domain
PDLKLNFD_03023 0.0 yjcE P Sodium proton antiporter
PDLKLNFD_03024 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDLKLNFD_03025 3.7e-107 pncA Q Isochorismatase family
PDLKLNFD_03026 2.7e-132
PDLKLNFD_03027 5.1e-125 skfE V ABC transporter
PDLKLNFD_03028 9.5e-65 yvoA_1 K Transcriptional regulator, GntR family
PDLKLNFD_03029 1.2e-45 S Enterocin A Immunity
PDLKLNFD_03030 7e-175 D Alpha beta
PDLKLNFD_03031 0.0 pepF2 E Oligopeptidase F
PDLKLNFD_03032 1.3e-72 K Transcriptional regulator
PDLKLNFD_03033 8.7e-164
PDLKLNFD_03035 5.6e-56
PDLKLNFD_03036 5.9e-48
PDLKLNFD_03037 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDLKLNFD_03038 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDLKLNFD_03039 2.7e-154 ymdB S YmdB-like protein
PDLKLNFD_03040 2.1e-216 rny S Endoribonuclease that initiates mRNA decay
PDLKLNFD_03041 5e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDLKLNFD_03042 2.5e-231 cinA 3.5.1.42 S Belongs to the CinA family
PDLKLNFD_03043 3.7e-97 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDLKLNFD_03044 5.7e-110 ymfM S Helix-turn-helix domain
PDLKLNFD_03045 2.1e-249 ymfH S Peptidase M16
PDLKLNFD_03046 6.5e-232 ymfF S Peptidase M16 inactive domain protein
PDLKLNFD_03047 3.8e-254 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDLKLNFD_03048 1.1e-92 yueI S Protein of unknown function (DUF1694)
PDLKLNFD_03049 2e-143 yvpB S Peptidase_C39 like family
PDLKLNFD_03050 4.2e-149 M Glycosyl hydrolases family 25
PDLKLNFD_03051 3.9e-111
PDLKLNFD_03052 1.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDLKLNFD_03053 1.8e-84 hmpT S Pfam:DUF3816
PDLKLNFD_03054 4.9e-57 pemK T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PDLKLNFD_03055 4.8e-44 T Antidote-toxin recognition MazE, bacterial antitoxin
PDLKLNFD_03056 2e-106 L Integrase
PDLKLNFD_03057 6.7e-79
PDLKLNFD_03058 1.7e-84 dps P Belongs to the Dps family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)