ORF_ID e_value Gene_name EC_number CAZy COGs Description
IBDKALAF_00001 3.7e-265 G Major Facilitator
IBDKALAF_00002 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
IBDKALAF_00003 3.6e-278 M protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes
IBDKALAF_00004 3.8e-271 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
IBDKALAF_00005 1.8e-268 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
IBDKALAF_00006 2.2e-72
IBDKALAF_00007 6.6e-31 K Transcriptional regulator, TetR family
IBDKALAF_00008 2.1e-12 K Transcriptional regulator, TetR family
IBDKALAF_00009 9.3e-13 steT_1 E amino acid
IBDKALAF_00011 4.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
IBDKALAF_00012 2.6e-82
IBDKALAF_00013 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IBDKALAF_00014 3.8e-187 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
IBDKALAF_00015 4.9e-262 nox C NADH oxidase
IBDKALAF_00016 1.5e-86 hmpT S ECF-type riboflavin transporter, S component
IBDKALAF_00017 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
IBDKALAF_00018 2.3e-167 yvgN C Aldo keto reductase
IBDKALAF_00019 5.6e-135 puuD S peptidase C26
IBDKALAF_00020 1.4e-256 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
IBDKALAF_00021 1.4e-215 yfeO P Voltage gated chloride channel
IBDKALAF_00022 4.5e-225 sptS 2.7.13.3 T Histidine kinase
IBDKALAF_00023 7.4e-118 K response regulator
IBDKALAF_00024 3.7e-87 2.7.6.5 T Region found in RelA / SpoT proteins
IBDKALAF_00025 1.9e-70
IBDKALAF_00026 4.6e-120 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
IBDKALAF_00027 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
IBDKALAF_00028 1.1e-256 malT G Major Facilitator
IBDKALAF_00029 3.7e-213 phbA 2.3.1.9 I Belongs to the thiolase family
IBDKALAF_00030 3.3e-172 malR K Transcriptional regulator, LacI family
IBDKALAF_00031 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
IBDKALAF_00032 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
IBDKALAF_00033 2.7e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IBDKALAF_00034 9.1e-104 wecD3 K PFAM GCN5-related N-acetyltransferase
IBDKALAF_00036 0.0 clpL O associated with various cellular activities
IBDKALAF_00037 7.8e-32
IBDKALAF_00038 1.8e-215 patA 2.6.1.1 E Aminotransferase
IBDKALAF_00039 1.6e-172 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IBDKALAF_00040 5e-75 osmC O OsmC-like protein
IBDKALAF_00041 1.1e-84 K FR47-like protein
IBDKALAF_00042 2.5e-53 L An automated process has identified a potential problem with this gene model
IBDKALAF_00043 1.2e-08 2.7.13.3 T GHKL domain
IBDKALAF_00045 1.3e-260 S Putative peptidoglycan binding domain
IBDKALAF_00046 5.2e-39
IBDKALAF_00047 3e-213 bacI V MacB-like periplasmic core domain
IBDKALAF_00048 2.8e-128 V ABC transporter
IBDKALAF_00049 2.8e-143 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
IBDKALAF_00050 4.4e-258 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
IBDKALAF_00051 4.1e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IBDKALAF_00052 1.9e-149 E Glyoxalase-like domain
IBDKALAF_00053 7.5e-155 glcU U sugar transport
IBDKALAF_00054 4.9e-226 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
IBDKALAF_00055 3.5e-94 S reductase
IBDKALAF_00057 8.8e-87 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
IBDKALAF_00058 1.7e-174 ABC-SBP S ABC transporter
IBDKALAF_00059 6.8e-84 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
IBDKALAF_00061 1.6e-214 htrA 3.4.21.107 O serine protease
IBDKALAF_00062 2.3e-153 vicX 3.1.26.11 S domain protein
IBDKALAF_00063 7.8e-149 yycI S YycH protein
IBDKALAF_00064 2e-244 yycH S YycH protein
IBDKALAF_00065 0.0 vicK 2.7.13.3 T Histidine kinase
IBDKALAF_00066 3.1e-130 K response regulator
IBDKALAF_00068 2.9e-307 lmrA 3.6.3.44 V ABC transporter
IBDKALAF_00069 1.8e-72 K helix_turn_helix multiple antibiotic resistance protein
IBDKALAF_00071 5.1e-123 Z012_01130 S Fic/DOC family
IBDKALAF_00072 2.1e-157 S Polyphosphate nucleotide phosphotransferase, PPK2 family
IBDKALAF_00073 9.1e-61
IBDKALAF_00074 6.9e-207 yttB EGP Major facilitator Superfamily
IBDKALAF_00075 1.8e-235 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
IBDKALAF_00076 2e-74 rplI J Binds to the 23S rRNA
IBDKALAF_00077 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
IBDKALAF_00078 2.6e-100 deoR K sugar-binding domain protein
IBDKALAF_00079 1.2e-46 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
IBDKALAF_00080 8.4e-32 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
IBDKALAF_00081 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
IBDKALAF_00082 3.1e-77 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
IBDKALAF_00083 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
IBDKALAF_00084 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
IBDKALAF_00085 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
IBDKALAF_00086 1.1e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IBDKALAF_00087 3.8e-34 yaaA S S4 domain protein YaaA
IBDKALAF_00088 5.2e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
IBDKALAF_00089 1.1e-250 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
IBDKALAF_00090 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
IBDKALAF_00091 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
IBDKALAF_00092 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
IBDKALAF_00093 3e-131 jag S R3H domain protein
IBDKALAF_00094 2.8e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
IBDKALAF_00095 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
IBDKALAF_00096 0.0 asnB 6.3.5.4 E Asparagine synthase
IBDKALAF_00097 1.7e-290 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
IBDKALAF_00098 1.4e-247 yxbA 6.3.1.12 S ATP-grasp enzyme
IBDKALAF_00099 1.7e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
IBDKALAF_00100 8.6e-15 2.3.1.183 M Acetyltransferase GNAT family
IBDKALAF_00101 1.1e-46 2.3.1.183 M Acetyltransferase GNAT family
IBDKALAF_00102 7.1e-74 L PFAM Integrase catalytic region
IBDKALAF_00103 4.5e-34 L PFAM Integrase catalytic region
IBDKALAF_00104 6.3e-81 ndk 2.7.4.6 F Belongs to the NDK family
IBDKALAF_00105 0.0 helD 3.6.4.12 L DNA helicase
IBDKALAF_00106 2.4e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
IBDKALAF_00108 2e-255 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IBDKALAF_00109 1.5e-264 yfnA E amino acid
IBDKALAF_00110 2.4e-118 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IBDKALAF_00111 8.9e-41 1.3.5.4 S FMN binding
IBDKALAF_00112 3.7e-221 norA EGP Major facilitator Superfamily
IBDKALAF_00113 5.8e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
IBDKALAF_00114 2.8e-154 metQ1 P Belongs to the nlpA lipoprotein family
IBDKALAF_00115 1.4e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IBDKALAF_00116 3.1e-103 metI P ABC transporter permease
IBDKALAF_00117 1.4e-212 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
IBDKALAF_00118 3e-57 clcA P chloride
IBDKALAF_00119 3.3e-45 clcA P chloride
IBDKALAF_00120 8.8e-215 L transposase, IS605 OrfB family
IBDKALAF_00121 5.5e-63 L PFAM transposase IS200-family protein
IBDKALAF_00122 2e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
IBDKALAF_00123 1.9e-102 proW P ABC transporter, permease protein
IBDKALAF_00124 6.5e-142 proV E ABC transporter, ATP-binding protein
IBDKALAF_00125 2.4e-108 proWZ P ABC transporter permease
IBDKALAF_00126 6e-163 proX M ABC transporter, substrate-binding protein, QAT family
IBDKALAF_00127 1.1e-72 K Transcriptional regulator
IBDKALAF_00128 4.2e-51 1.6.5.2 GM NAD(P)H-binding
IBDKALAF_00129 1.2e-35 1.6.5.2 GM NAD(P)H-binding
IBDKALAF_00131 1.8e-220 5.4.2.7 G Metalloenzyme superfamily
IBDKALAF_00132 2.5e-311 cadA P P-type ATPase
IBDKALAF_00133 8.2e-110 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
IBDKALAF_00134 3.9e-125
IBDKALAF_00135 2.6e-52 S Sugar efflux transporter for intercellular exchange
IBDKALAF_00136 8.5e-246 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
IBDKALAF_00138 0.0 L Helicase C-terminal domain protein
IBDKALAF_00139 1.8e-63 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
IBDKALAF_00140 1.2e-177 S Aldo keto reductase
IBDKALAF_00142 8.5e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
IBDKALAF_00143 6.6e-58 psiE S Phosphate-starvation-inducible E
IBDKALAF_00144 6.9e-98 ydeN S Serine hydrolase
IBDKALAF_00146 1.2e-180 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
IBDKALAF_00147 1.2e-253 nhaC C Na H antiporter NhaC
IBDKALAF_00148 1e-37 S Cytochrome b5-like Heme/Steroid binding domain
IBDKALAF_00149 1.8e-113 ywnB S NAD(P)H-binding
IBDKALAF_00150 1.4e-36
IBDKALAF_00151 3.3e-127 IQ Dehydrogenase reductase
IBDKALAF_00152 6.4e-238 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
IBDKALAF_00153 1.7e-19 3.2.1.18 GH33 M Rib/alpha-like repeat
IBDKALAF_00154 1.1e-59 L PFAM transposase IS200-family protein
IBDKALAF_00155 2e-146 cobT 2.4.2.21, 6.3.5.11, 6.3.5.9 F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
IBDKALAF_00156 6.5e-64 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
IBDKALAF_00157 5.8e-74 gpm 3.1.3.73, 5.4.2.12 G Belongs to the phosphoglycerate mutase family
IBDKALAF_00158 2.2e-118 cobS 2.7.8.26 H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
IBDKALAF_00159 1.6e-76 cobU 2.7.1.156, 2.7.7.62, 6.3.5.10 H Cobinamide kinase / cobinamide phosphate guanyltransferase
IBDKALAF_00160 1.1e-239 hemL 5.4.3.8 H Aminotransferase class-III
IBDKALAF_00161 1.1e-173 hemB 4.2.1.24 H Delta-aminolevulinic acid dehydratase
IBDKALAF_00162 2.6e-137 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
IBDKALAF_00163 4.1e-194 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
IBDKALAF_00164 6e-58 cysG 1.3.1.76, 4.99.1.4 H Putative NAD(P)-binding
IBDKALAF_00165 2.7e-240 cobQ 6.3.5.10 H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
IBDKALAF_00166 7.8e-122 cbiO 2.1.1.195 P part of an ABC transporter complex. Responsible for energy coupling to the transport system
IBDKALAF_00167 6.8e-103 cbiQ P Cobalt transport protein
IBDKALAF_00168 7.6e-44 cbiN P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
IBDKALAF_00169 7.7e-124 cbiM P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
IBDKALAF_00170 8.1e-91 cobI 2.1.1.130, 2.1.1.151, 4.99.1.3 H Tetrapyrrole (Corrin/Porphyrin) Methylases
IBDKALAF_00171 8.1e-108 cbiK 4.99.1.3 H Cobalt chelatase (CbiK)
IBDKALAF_00172 3.3e-176 cobA 2.1.1.107, 4.2.1.75 H Tetrapyrrole (Corrin/Porphyrin) Methylases
IBDKALAF_00173 2.8e-97 cobK 1.3.1.106, 1.3.1.54, 2.1.1.195 H Precorrin-6x reductase CbiJ/CobK
IBDKALAF_00174 1.1e-127 cobJ 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 6.3.5.10 H Tetrapyrrole (Corrin/Porphyrin) Methylases
IBDKALAF_00175 3.3e-144 cbiG 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12 H Cobalamin synthesis G C-terminus
IBDKALAF_00176 8.1e-129 cobM 1.3.1.76, 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 4.99.1.4 H Tetrapyrrole (Corrin/Porphyrin) Methylases
IBDKALAF_00177 1.4e-77 cbiT 2.1.1.132, 2.1.1.196 H Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
IBDKALAF_00178 1.6e-79 cbiE 2.1.1.132, 2.1.1.289 H Tetrapyrrole (Corrin/Porphyrin) Methylases
IBDKALAF_00179 6.4e-186 cbiD 2.1.1.195 H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
IBDKALAF_00180 3.8e-109 cbiC 5.4.99.60, 5.4.99.61 H Precorrin-8X methylmutase
IBDKALAF_00181 4.9e-147 cobD 6.3.1.10 H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
IBDKALAF_00182 7.3e-205 cbiA 6.3.5.11, 6.3.5.9 F Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
IBDKALAF_00183 6.1e-170 cobD 4.1.1.81 E Aminotransferase class I and II
IBDKALAF_00184 3.2e-77 cobO 2.5.1.17 S Cobalamin adenosyltransferase
IBDKALAF_00185 2.5e-115 XK27_04590 S NADPH-dependent FMN reductase
IBDKALAF_00186 2.2e-73 fld C Flavodoxin
IBDKALAF_00187 2.6e-68 eutP E Ethanolamine utilisation - propanediol utilisation
IBDKALAF_00188 5.9e-68 P Cadmium resistance transporter
IBDKALAF_00189 1.9e-75 pgm1 3.1.3.73 G phosphoglycerate mutase
IBDKALAF_00190 1.1e-115 3.1.3.48 T Pfam:Y_phosphatase3C
IBDKALAF_00191 3e-54 pduU E BMC
IBDKALAF_00192 1.9e-217 ackA 2.7.2.1, 2.7.2.15 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IBDKALAF_00193 2.1e-202 pduQ C Iron-containing alcohol dehydrogenase
IBDKALAF_00194 3.1e-262 pduP 1.2.1.87 C Aldehyde dehydrogenase family
IBDKALAF_00195 4.5e-77 pduO S Haem-degrading
IBDKALAF_00196 1e-102 pduO 2.5.1.17 S Cobalamin adenosyltransferase
IBDKALAF_00197 5.2e-41 ccmL CQ Ethanolamine utilisation protein EutN/carboxysome
IBDKALAF_00198 1.3e-79 S Putative propanediol utilisation
IBDKALAF_00199 1.9e-115 pduL 2.3.1.222, 2.3.1.8 Q Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
IBDKALAF_00200 7.8e-40 pduA_4 CQ BMC
IBDKALAF_00201 1.8e-56 pduK CQ BMC
IBDKALAF_00202 2.6e-45 pduH S Dehydratase medium subunit
IBDKALAF_00203 5.6e-309 pduG D Diol dehydratase reactivase ATPase-like domain
IBDKALAF_00204 2.4e-71 pduE 4.2.1.28 Q Dehydratase small subunit
IBDKALAF_00205 3.9e-125 pduD 4.2.1.28, 4.2.1.30 Q Dehydratase medium subunit
IBDKALAF_00206 0.0 pduC 4.2.1.28 Q Dehydratase large subunit
IBDKALAF_00207 2.7e-134 pduB E BMC
IBDKALAF_00208 1.6e-37 pduA_4 CQ BMC
IBDKALAF_00209 8.3e-159 K helix_turn_helix, arabinose operon control protein
IBDKALAF_00210 3.6e-138 eutJ E Hsp70 protein
IBDKALAF_00211 1e-133 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
IBDKALAF_00212 8.3e-160
IBDKALAF_00213 1.3e-156 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
IBDKALAF_00214 3.4e-160 S AI-2E family transporter
IBDKALAF_00215 9.8e-132 XK27_07210 6.1.1.6 S B3 4 domain
IBDKALAF_00216 2.3e-78 yybA 2.3.1.57 K Transcriptional regulator
IBDKALAF_00217 1.1e-89 M1-874 K Domain of unknown function (DUF1836)
IBDKALAF_00218 2.5e-89 1.14.14.47, 1.6.5.3, 1.6.99.3 GM epimerase
IBDKALAF_00219 2e-152 ypdB V (ABC) transporter
IBDKALAF_00220 9.2e-237 yhdP S Transporter associated domain
IBDKALAF_00221 2.7e-82 nrdI F Belongs to the NrdI family
IBDKALAF_00222 2.7e-73 S 3-demethylubiquinone-9 3-methyltransferase
IBDKALAF_00223 4.4e-190 yeaN P Transporter, major facilitator family protein
IBDKALAF_00224 8.3e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
IBDKALAF_00225 7.1e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
IBDKALAF_00226 1.8e-38
IBDKALAF_00227 0.0 lacS G Transporter
IBDKALAF_00228 3.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
IBDKALAF_00229 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
IBDKALAF_00230 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
IBDKALAF_00231 1.9e-172 dnaI L Primosomal protein DnaI
IBDKALAF_00232 5.9e-223 dnaB L replication initiation and membrane attachment
IBDKALAF_00233 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IBDKALAF_00234 3.4e-98 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
IBDKALAF_00235 1.2e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
IBDKALAF_00236 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IBDKALAF_00237 1e-15 yoaK S Protein of unknown function (DUF1275)
IBDKALAF_00238 1.9e-119 ybhL S Belongs to the BI1 family
IBDKALAF_00239 7.6e-252 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
IBDKALAF_00240 1.9e-118 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
IBDKALAF_00241 1.6e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
IBDKALAF_00242 1.1e-56 ytzB S Small secreted protein
IBDKALAF_00243 2.6e-11 glsA 3.5.1.2 E Belongs to the glutaminase family
IBDKALAF_00244 9.9e-65 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
IBDKALAF_00245 1.7e-12 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
IBDKALAF_00246 9.5e-16 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
IBDKALAF_00247 2.5e-16 S YSIRK type signal peptide
IBDKALAF_00248 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
IBDKALAF_00249 1.9e-217 ecsB U ABC transporter
IBDKALAF_00250 8.7e-136 ecsA V ABC transporter, ATP-binding protein
IBDKALAF_00251 2e-76 hit FG histidine triad
IBDKALAF_00253 8.5e-128 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
IBDKALAF_00254 0.0 L AAA domain
IBDKALAF_00255 3.4e-222 yhaO L Ser Thr phosphatase family protein
IBDKALAF_00256 9.4e-38 yheA S Belongs to the UPF0342 family
IBDKALAF_00257 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
IBDKALAF_00258 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
IBDKALAF_00259 4.7e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
IBDKALAF_00260 5.6e-164 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
IBDKALAF_00262 1.6e-39
IBDKALAF_00263 5.1e-43
IBDKALAF_00264 2.1e-208 folP 2.5.1.15 H dihydropteroate synthase
IBDKALAF_00265 1.1e-101 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
IBDKALAF_00266 3.9e-221 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
IBDKALAF_00267 1.5e-103 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
IBDKALAF_00268 2.9e-90 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
IBDKALAF_00269 1e-54 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
IBDKALAF_00270 1.9e-68
IBDKALAF_00272 1.9e-43
IBDKALAF_00273 7.1e-116 S CAAX protease self-immunity
IBDKALAF_00274 1.8e-31
IBDKALAF_00275 5.7e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IBDKALAF_00276 1.5e-186 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
IBDKALAF_00277 2.2e-113
IBDKALAF_00278 1.9e-115 dck 2.7.1.74 F deoxynucleoside kinase
IBDKALAF_00279 1.3e-174 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
IBDKALAF_00280 7.3e-86 uspA T Belongs to the universal stress protein A family
IBDKALAF_00281 3.1e-275 pepV 3.5.1.18 E dipeptidase PepV
IBDKALAF_00282 1.2e-152 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IBDKALAF_00283 1.1e-300 ytgP S Polysaccharide biosynthesis protein
IBDKALAF_00284 7.6e-42
IBDKALAF_00285 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
IBDKALAF_00286 1.9e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
IBDKALAF_00287 1.8e-93 tag 3.2.2.20 L glycosylase
IBDKALAF_00288 2.7e-258 EGP Major facilitator Superfamily
IBDKALAF_00289 2.8e-84 perR P Belongs to the Fur family
IBDKALAF_00290 7.7e-231 cycA E Amino acid permease
IBDKALAF_00291 5.3e-101 V VanZ like family
IBDKALAF_00292 1e-23
IBDKALAF_00293 7.7e-54 S Short repeat of unknown function (DUF308)
IBDKALAF_00294 2.5e-77 S Psort location Cytoplasmic, score
IBDKALAF_00295 4.6e-285 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
IBDKALAF_00296 4.5e-76 hsp O Belongs to the small heat shock protein (HSP20) family
IBDKALAF_00297 1.5e-152 yeaE S Aldo keto
IBDKALAF_00298 4.5e-236 preA 1.3.1.1 C 4Fe-4S dicluster domain
IBDKALAF_00299 9.5e-236 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
IBDKALAF_00300 3.9e-147 xth 3.1.11.2 L exodeoxyribonuclease III
IBDKALAF_00301 7.3e-84 lytE M LysM domain protein
IBDKALAF_00302 0.0 oppD EP Psort location Cytoplasmic, score
IBDKALAF_00303 2e-42 lytE M LysM domain protein
IBDKALAF_00304 4.8e-157 sufD O Uncharacterized protein family (UPF0051)
IBDKALAF_00305 3.2e-109 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IBDKALAF_00306 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
IBDKALAF_00307 5e-233 lmrB EGP Major facilitator Superfamily
IBDKALAF_00308 4.1e-98 2.3.1.128 K Acetyltransferase (GNAT) domain
IBDKALAF_00310 2.2e-44 XK27_01125 L PFAM IS66 Orf2 family protein
IBDKALAF_00311 1.4e-82
IBDKALAF_00312 1.6e-293 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
IBDKALAF_00313 2.4e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IBDKALAF_00314 1.1e-169 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
IBDKALAF_00315 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IBDKALAF_00316 1.3e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
IBDKALAF_00317 2.7e-250 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
IBDKALAF_00318 9.8e-67 yabR J RNA binding
IBDKALAF_00319 1.6e-55 divIC D Septum formation initiator
IBDKALAF_00320 2.1e-39 yabO J S4 domain protein
IBDKALAF_00321 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IBDKALAF_00322 1.3e-102 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
IBDKALAF_00323 1.1e-113 S (CBS) domain
IBDKALAF_00324 1.9e-144 tesE Q hydratase
IBDKALAF_00325 2.3e-242 codA 3.5.4.1 F cytosine deaminase
IBDKALAF_00326 3.1e-251 U Belongs to the purine-cytosine permease (2.A.39) family
IBDKALAF_00327 9.4e-62 L Toxic component of a toxin-antitoxin (TA) module
IBDKALAF_00328 2e-208 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IBDKALAF_00329 3.2e-59 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
IBDKALAF_00331 6.5e-295 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
IBDKALAF_00332 3.9e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
IBDKALAF_00333 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
IBDKALAF_00334 5.6e-255 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
IBDKALAF_00335 6.9e-53 glsA 3.5.1.2 E Belongs to the glutaminase family
IBDKALAF_00336 1.9e-101 glsA 3.5.1.2 E Belongs to the glutaminase family
IBDKALAF_00337 2.2e-151 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IBDKALAF_00338 3.6e-253 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
IBDKALAF_00339 6.4e-257 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
IBDKALAF_00340 2e-158 htpX O Belongs to the peptidase M48B family
IBDKALAF_00341 2e-92 lemA S LemA family
IBDKALAF_00342 8e-87 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IBDKALAF_00343 9.2e-121 pgm3 3.1.3.73 G Belongs to the phosphoglycerate mutase family
IBDKALAF_00344 1.3e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
IBDKALAF_00345 9.8e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
IBDKALAF_00346 6.1e-159 3.2.1.55 GH51 G Right handed beta helix region
IBDKALAF_00347 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
IBDKALAF_00348 1.6e-115 srtA 3.4.22.70 M sortase family
IBDKALAF_00349 2.8e-165 S Alpha/beta hydrolase of unknown function (DUF915)
IBDKALAF_00350 1.3e-235 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IBDKALAF_00351 4.6e-41 rpmE2 J Ribosomal protein L31
IBDKALAF_00352 2e-236 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IBDKALAF_00353 2.2e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
IBDKALAF_00354 8.7e-51 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
IBDKALAF_00355 5.2e-53 ywiB S Domain of unknown function (DUF1934)
IBDKALAF_00356 2.4e-150 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
IBDKALAF_00357 1e-270 ywfO S HD domain protein
IBDKALAF_00358 2.1e-146 yxeH S hydrolase
IBDKALAF_00359 9e-48
IBDKALAF_00360 1.1e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IBDKALAF_00361 9.2e-240 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
IBDKALAF_00362 6.9e-150 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
IBDKALAF_00363 8e-127 znuB U ABC 3 transport family
IBDKALAF_00364 2.2e-122 fhuC P ABC transporter
IBDKALAF_00365 6.9e-167 znuA P Belongs to the bacterial solute-binding protein 9 family
IBDKALAF_00366 3.1e-161 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
IBDKALAF_00367 6.8e-37 veg S Biofilm formation stimulator VEG
IBDKALAF_00368 2.8e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
IBDKALAF_00369 8e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
IBDKALAF_00370 3.5e-154 tatD L hydrolase, TatD family
IBDKALAF_00371 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IBDKALAF_00372 6.9e-161 yunF F Protein of unknown function DUF72
IBDKALAF_00374 9.8e-129 cobB K SIR2 family
IBDKALAF_00375 8.6e-176
IBDKALAF_00376 1.8e-226 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
IBDKALAF_00377 2.1e-166 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
IBDKALAF_00378 7.7e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
IBDKALAF_00379 3e-181 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
IBDKALAF_00380 2e-09 IQ KR domain
IBDKALAF_00381 4e-113 IQ KR domain
IBDKALAF_00382 3.3e-133 S membrane transporter protein
IBDKALAF_00383 1.3e-96 S ABC-type cobalt transport system, permease component
IBDKALAF_00384 1.7e-246 cbiO1 S ABC transporter, ATP-binding protein
IBDKALAF_00385 3.2e-113 P Cobalt transport protein
IBDKALAF_00386 1.6e-52 yvlA
IBDKALAF_00387 0.0 yjcE P Sodium proton antiporter
IBDKALAF_00388 6.4e-52 ypaA S Protein of unknown function (DUF1304)
IBDKALAF_00389 2e-172 D Alpha beta
IBDKALAF_00390 1e-72 K Transcriptional regulator
IBDKALAF_00391 6.5e-159
IBDKALAF_00392 7.9e-132 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IBDKALAF_00393 5.3e-158 S Membrane transport protein
IBDKALAF_00394 3.9e-84 K FCD
IBDKALAF_00395 5.9e-169 1.6.5.5 C Zinc-binding dehydrogenase
IBDKALAF_00396 2.7e-255 G PTS system Galactitol-specific IIC component
IBDKALAF_00397 1.5e-209 EGP Major facilitator Superfamily
IBDKALAF_00398 1.4e-135 V ABC transporter
IBDKALAF_00399 2e-105
IBDKALAF_00400 4e-14
IBDKALAF_00401 7.1e-63
IBDKALAF_00402 1.5e-194 lplA 6.3.1.20 H Lipoate-protein ligase
IBDKALAF_00403 6.6e-81 uspA T universal stress protein
IBDKALAF_00404 0.0 tetP J elongation factor G
IBDKALAF_00405 2.9e-165 GK ROK family
IBDKALAF_00406 2.7e-236 brnQ U Component of the transport system for branched-chain amino acids
IBDKALAF_00407 4.7e-137 aroD S Serine hydrolase (FSH1)
IBDKALAF_00408 8.4e-82 yagE E amino acid
IBDKALAF_00409 9e-114 yagE E amino acid
IBDKALAF_00410 2.4e-17 yagE E amino acid
IBDKALAF_00411 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
IBDKALAF_00412 4.7e-126 gntR K UbiC transcription regulator-associated domain protein
IBDKALAF_00413 1.6e-85 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
IBDKALAF_00414 1.7e-273 pipD E Dipeptidase
IBDKALAF_00415 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
IBDKALAF_00416 0.0 yfiC V ABC transporter
IBDKALAF_00417 9.8e-287 lmrA V ABC transporter, ATP-binding protein
IBDKALAF_00418 1.7e-17 K Winged helix DNA-binding domain
IBDKALAF_00419 1.9e-179 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IBDKALAF_00420 2.9e-19 S PFAM Archaeal ATPase
IBDKALAF_00421 5.9e-73 S ECF transporter, substrate-specific component
IBDKALAF_00422 9.8e-51 S Domain of unknown function (DUF4430)
IBDKALAF_00423 3.1e-17 cnrT EG PFAM EamA-like transporter family
IBDKALAF_00424 8.6e-20 cnrT EG PFAM EamA-like transporter family
IBDKALAF_00425 9.9e-177 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
IBDKALAF_00426 2.5e-103 T Ion transport 2 domain protein
IBDKALAF_00427 0.0 S Bacterial membrane protein YfhO
IBDKALAF_00428 2.2e-71 G Transporter, major facilitator family protein
IBDKALAF_00429 1.5e-124 G Transporter, major facilitator family protein
IBDKALAF_00430 6.2e-105 yvrI K sigma factor activity
IBDKALAF_00431 7.5e-59 ydiI Q Thioesterase superfamily
IBDKALAF_00432 2.9e-156 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
IBDKALAF_00433 2.2e-268 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
IBDKALAF_00434 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
IBDKALAF_00435 2.8e-31 feoA P FeoA domain
IBDKALAF_00436 1.9e-144 sufC O FeS assembly ATPase SufC
IBDKALAF_00437 5.1e-240 sufD O FeS assembly protein SufD
IBDKALAF_00438 5.2e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IBDKALAF_00439 3.6e-79 nifU C SUF system FeS assembly protein, NifU family
IBDKALAF_00440 1.2e-271 sufB O assembly protein SufB
IBDKALAF_00441 2.8e-57 yitW S Iron-sulfur cluster assembly protein
IBDKALAF_00442 5.2e-159 hipB K Helix-turn-helix
IBDKALAF_00443 3.4e-115 nreC K PFAM regulatory protein LuxR
IBDKALAF_00444 9.2e-39 S Cytochrome B5
IBDKALAF_00445 1e-153 yitU 3.1.3.104 S hydrolase
IBDKALAF_00446 3.7e-257 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
IBDKALAF_00447 1.5e-147 f42a O Band 7 protein
IBDKALAF_00448 3.9e-50 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
IBDKALAF_00449 2.4e-110 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
IBDKALAF_00450 2.6e-118 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
IBDKALAF_00451 2.2e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
IBDKALAF_00452 3.7e-185 galR K Periplasmic binding protein-like domain
IBDKALAF_00453 0.0 rafA 3.2.1.22 G alpha-galactosidase
IBDKALAF_00454 1.5e-131 L Transposase
IBDKALAF_00455 6.3e-123 L Transposase
IBDKALAF_00456 2.5e-86 S Protein of unknown function (DUF1440)
IBDKALAF_00457 6.4e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
IBDKALAF_00458 5.1e-212 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
IBDKALAF_00459 7.4e-167 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
IBDKALAF_00460 6.3e-171 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
IBDKALAF_00461 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
IBDKALAF_00462 9.9e-86 ypmB S Protein conserved in bacteria
IBDKALAF_00463 8.1e-123 dnaD L DnaD domain protein
IBDKALAF_00464 1.3e-160 EG EamA-like transporter family
IBDKALAF_00465 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
IBDKALAF_00466 5.8e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
IBDKALAF_00467 3.2e-101 ypsA S Belongs to the UPF0398 family
IBDKALAF_00468 1.2e-42 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
IBDKALAF_00469 8e-82 F Belongs to the NrdI family
IBDKALAF_00470 1.1e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
IBDKALAF_00471 9e-71 rnhA 3.1.26.4 L Ribonuclease HI
IBDKALAF_00472 5.6e-65 esbA S Family of unknown function (DUF5322)
IBDKALAF_00473 1.7e-73 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
IBDKALAF_00474 2.2e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
IBDKALAF_00475 1.4e-206 carA 6.3.5.5 F Belongs to the CarA family
IBDKALAF_00476 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
IBDKALAF_00477 0.0 FbpA K Fibronectin-binding protein
IBDKALAF_00478 1.6e-158 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IBDKALAF_00479 5.5e-161 degV S EDD domain protein, DegV family
IBDKALAF_00480 3e-90
IBDKALAF_00481 1.1e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
IBDKALAF_00482 3.7e-154 gspA M family 8
IBDKALAF_00483 2.8e-154 S Alpha beta hydrolase
IBDKALAF_00484 1.5e-94 K Acetyltransferase (GNAT) domain
IBDKALAF_00485 2.4e-240 XK27_08635 S UPF0210 protein
IBDKALAF_00486 2.1e-39 gcvR T Belongs to the UPF0237 family
IBDKALAF_00487 1e-167 1.1.1.346 C Aldo keto reductase
IBDKALAF_00488 1.1e-158 K LysR substrate binding domain protein
IBDKALAF_00489 1.5e-80 C Flavodoxin
IBDKALAF_00490 1.2e-77 yphH S Cupin domain
IBDKALAF_00491 1.7e-73 yeaL S UPF0756 membrane protein
IBDKALAF_00492 4e-243 EGP Major facilitator Superfamily
IBDKALAF_00493 5e-75 copY K Copper transport repressor CopY TcrY
IBDKALAF_00494 8.5e-246 yhdP S Transporter associated domain
IBDKALAF_00495 0.0 ubiB S ABC1 family
IBDKALAF_00496 4.3e-144 S DUF218 domain
IBDKALAF_00497 4.1e-68 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
IBDKALAF_00498 1.6e-56 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IBDKALAF_00499 4.5e-55 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IBDKALAF_00500 0.0 uvrA3 L excinuclease ABC, A subunit
IBDKALAF_00501 3.7e-120 S SNARE associated Golgi protein
IBDKALAF_00502 2.3e-229 N Uncharacterized conserved protein (DUF2075)
IBDKALAF_00503 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
IBDKALAF_00505 1.5e-253 yifK E Amino acid permease
IBDKALAF_00506 6.1e-157 endA V DNA/RNA non-specific endonuclease
IBDKALAF_00507 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IBDKALAF_00508 2.3e-41 ybaN S Protein of unknown function (DUF454)
IBDKALAF_00509 4.5e-71 S Protein of unknown function (DUF3290)
IBDKALAF_00510 4.7e-114 yviA S Protein of unknown function (DUF421)
IBDKALAF_00511 2.9e-159 S Alpha/beta hydrolase of unknown function (DUF915)
IBDKALAF_00512 2e-18
IBDKALAF_00513 1.1e-89 ntd 2.4.2.6 F Nucleoside
IBDKALAF_00514 2.4e-150 3.1.3.102, 3.1.3.104 S hydrolase
IBDKALAF_00515 8.9e-41 yrvD S Pfam:DUF1049
IBDKALAF_00517 3.3e-35 S Phage derived protein Gp49-like (DUF891)
IBDKALAF_00518 8.5e-20 K Helix-turn-helix XRE-family like proteins
IBDKALAF_00519 5.7e-163 I alpha/beta hydrolase fold
IBDKALAF_00520 1.8e-113 frnE Q DSBA-like thioredoxin domain
IBDKALAF_00525 4.7e-37 L Helix-turn-helix domain
IBDKALAF_00526 9.5e-39 S Cytochrome B5
IBDKALAF_00527 5.2e-127 L PFAM Integrase catalytic region
IBDKALAF_00528 4.3e-13
IBDKALAF_00529 1.3e-205 cytX U Belongs to the purine-cytosine permease (2.A.39) family
IBDKALAF_00530 1.6e-82 ltrA S Bacterial low temperature requirement A protein (LtrA)
IBDKALAF_00532 1.1e-26 wecD3 K PFAM GCN5-related N-acetyltransferase
IBDKALAF_00533 8e-79
IBDKALAF_00534 7.9e-122 M Lysin motif
IBDKALAF_00535 4e-196 EGP Major facilitator Superfamily
IBDKALAF_00536 1e-37 D Antitoxin component of a toxin-antitoxin (TA) module
IBDKALAF_00537 1.6e-49 S ParE toxin of type II toxin-antitoxin system, parDE
IBDKALAF_00538 8.8e-88 ywlG S Belongs to the UPF0340 family
IBDKALAF_00539 2.1e-160 spoU 2.1.1.185 J Methyltransferase
IBDKALAF_00540 1.3e-224 oxlT P Major Facilitator Superfamily
IBDKALAF_00541 3.1e-71 2.1.1.72 V Type II restriction enzyme, methylase subunits
IBDKALAF_00542 2.3e-24 2.1.1.72 V Type II restriction enzyme, methylase subunits
IBDKALAF_00543 6.4e-52 2.1.1.72 V Type II restriction enzyme, methylase subunits
IBDKALAF_00544 3.3e-258 G Major Facilitator Superfamily
IBDKALAF_00545 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
IBDKALAF_00546 1.4e-163 add 3.5.4.2, 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
IBDKALAF_00547 3.8e-182 pbuG S permease
IBDKALAF_00548 6.3e-257 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
IBDKALAF_00549 5.9e-68 L Helix-turn-helix domain
IBDKALAF_00550 1e-135 L hmm pf00665
IBDKALAF_00551 5e-89 yeeA V Type II restriction enzyme, methylase subunits
IBDKALAF_00552 5.6e-24
IBDKALAF_00553 8.7e-144 L Belongs to the 'phage' integrase family
IBDKALAF_00554 1.8e-28 L Transposase and inactivated derivatives IS30 family
IBDKALAF_00555 4.1e-127 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IBDKALAF_00556 2e-206 L Integrase core domain
IBDKALAF_00557 4.2e-32 D Domain of Unknown Function (DUF1542)
IBDKALAF_00558 4.4e-77 ctsR K Belongs to the CtsR family
IBDKALAF_00559 8e-196 adhP 1.1.1.1 C alcohol dehydrogenase
IBDKALAF_00560 1.5e-141 S Hydrolases of the alpha beta superfamily
IBDKALAF_00561 8.9e-53 L PFAM Integrase catalytic region
IBDKALAF_00567 5.6e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
IBDKALAF_00568 4.3e-275 lysP E amino acid
IBDKALAF_00569 4.7e-08 2.3.1.128 J Acetyltransferase (GNAT) domain
IBDKALAF_00570 1.5e-118 lssY 3.6.1.27 I phosphatase
IBDKALAF_00571 1e-81 S Threonine/Serine exporter, ThrE
IBDKALAF_00572 2.6e-127 thrE S Putative threonine/serine exporter
IBDKALAF_00573 1e-30 cspC K Cold shock protein
IBDKALAF_00574 1.6e-123 sirR K iron dependent repressor
IBDKALAF_00575 5.5e-164 czcD P cation diffusion facilitator family transporter
IBDKALAF_00576 2.5e-116 S membrane
IBDKALAF_00577 6.4e-109 S VIT family
IBDKALAF_00578 5.5e-83 usp1 T Belongs to the universal stress protein A family
IBDKALAF_00579 1.4e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IBDKALAF_00580 5.7e-152 glnH ET ABC transporter
IBDKALAF_00581 7.1e-110 gluC P ABC transporter permease
IBDKALAF_00582 1e-108 glnP P ABC transporter permease
IBDKALAF_00583 8.3e-221 S CAAX protease self-immunity
IBDKALAF_00584 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
IBDKALAF_00585 3.9e-54
IBDKALAF_00586 9.8e-74 merR K MerR HTH family regulatory protein
IBDKALAF_00587 1.4e-268 lmrB EGP Major facilitator Superfamily
IBDKALAF_00588 4.1e-122 S Domain of unknown function (DUF4811)
IBDKALAF_00589 5.9e-160 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
IBDKALAF_00591 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
IBDKALAF_00592 5.4e-92 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
IBDKALAF_00593 4.2e-186 I Alpha beta
IBDKALAF_00594 4.5e-264 emrY EGP Major facilitator Superfamily
IBDKALAF_00595 2.5e-118 ung2 3.2.2.27 L Uracil-DNA glycosylase
IBDKALAF_00596 9.4e-253 yjjP S Putative threonine/serine exporter
IBDKALAF_00597 2.6e-158 mleR K LysR family
IBDKALAF_00598 4.9e-252 yflS P Sodium:sulfate symporter transmembrane region
IBDKALAF_00599 1.7e-265 frdC 1.3.5.4 C FAD binding domain
IBDKALAF_00600 4e-259 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
IBDKALAF_00601 2.2e-304 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
IBDKALAF_00602 4.3e-158 mleR K LysR family
IBDKALAF_00603 6.6e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IBDKALAF_00604 3.3e-205 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
IBDKALAF_00605 3.9e-295 L PFAM plasmid pRiA4b ORF-3 family protein
IBDKALAF_00606 2.9e-170 L transposase, IS605 OrfB family
IBDKALAF_00607 2.1e-263 S Uncharacterized protein conserved in bacteria (DUF2252)
IBDKALAF_00608 6.2e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IBDKALAF_00609 8.5e-226 mtnE 2.6.1.83 E Aminotransferase
IBDKALAF_00610 1.6e-140 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
IBDKALAF_00611 8.4e-137 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
IBDKALAF_00612 7.6e-217 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
IBDKALAF_00613 6.8e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IBDKALAF_00614 1.4e-192 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
IBDKALAF_00615 8.9e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
IBDKALAF_00616 3.6e-126 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
IBDKALAF_00617 5.7e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
IBDKALAF_00618 1.2e-169 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
IBDKALAF_00619 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
IBDKALAF_00620 2.4e-281 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
IBDKALAF_00621 1.2e-102 pncA Q Isochorismatase family
IBDKALAF_00622 1e-257 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IBDKALAF_00623 1.1e-127 3.6.1.13, 3.6.1.55 F NUDIX domain
IBDKALAF_00624 1.2e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
IBDKALAF_00625 8.8e-172 S Phage capsid family
IBDKALAF_00626 4.6e-39 S Phage gp6-like head-tail connector protein
IBDKALAF_00627 6.5e-55 S Phage head-tail joining protein
IBDKALAF_00628 4.6e-54 S Bacteriophage holin family
IBDKALAF_00629 8.2e-19
IBDKALAF_00630 1.3e-68 L Recombinase zinc beta ribbon domain
IBDKALAF_00631 2.4e-110 L Recombinase zinc beta ribbon domain
IBDKALAF_00632 5.4e-148 L Recombinase
IBDKALAF_00633 7.5e-22 5.1.1.13 M Asp/Glu/Hydantoin racemase
IBDKALAF_00634 1.8e-61 5.1.1.13 M Asp/Glu/Hydantoin racemase
IBDKALAF_00635 1.5e-82 ung2 3.2.2.27 L Uracil-DNA glycosylase
IBDKALAF_00636 1.7e-16 ung2 3.2.2.27 L Uracil-DNA glycosylase
IBDKALAF_00637 6.8e-113 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
IBDKALAF_00638 5.7e-92 dps P Belongs to the Dps family
IBDKALAF_00639 8.7e-34 copZ C Heavy-metal-associated domain
IBDKALAF_00640 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
IBDKALAF_00641 2.6e-121 glcU U sugar transport
IBDKALAF_00642 3.4e-272 yclK 2.7.13.3 T Histidine kinase
IBDKALAF_00643 1.2e-134 K response regulator
IBDKALAF_00644 7.4e-54 sip L Belongs to the 'phage' integrase family
IBDKALAF_00645 2.4e-09 K Helix-turn-helix XRE-family like proteins
IBDKALAF_00651 6.8e-27 S YoeB-like toxin of bacterial type II toxin-antitoxin system
IBDKALAF_00652 1.1e-27 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
IBDKALAF_00653 7.3e-27
IBDKALAF_00656 1.2e-41
IBDKALAF_00657 1.4e-13 K Cro/C1-type HTH DNA-binding domain
IBDKALAF_00664 1.3e-76 lytE M Lysin motif
IBDKALAF_00665 4.1e-147 XK27_02985 S Cof-like hydrolase
IBDKALAF_00666 1.8e-78 K Transcriptional regulator
IBDKALAF_00667 0.0 oatA I Acyltransferase
IBDKALAF_00668 5.6e-52
IBDKALAF_00669 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
IBDKALAF_00670 8.5e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IBDKALAF_00671 5.8e-126 ybbR S YbbR-like protein
IBDKALAF_00672 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
IBDKALAF_00673 3.7e-249 fucP G Major Facilitator Superfamily
IBDKALAF_00674 1e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
IBDKALAF_00675 2.5e-164 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IBDKALAF_00676 3.6e-168 murB 1.3.1.98 M Cell wall formation
IBDKALAF_00677 2.5e-100 dnaQ 2.7.7.7 L DNA polymerase III
IBDKALAF_00678 6.4e-75 S PAS domain
IBDKALAF_00679 6.1e-88 K Acetyltransferase (GNAT) domain
IBDKALAF_00680 1.3e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
IBDKALAF_00681 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
IBDKALAF_00682 9e-135 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
IBDKALAF_00683 9.1e-104 yxjI
IBDKALAF_00684 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
IBDKALAF_00685 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
IBDKALAF_00686 1.4e-130 est 3.1.1.1 S Serine aminopeptidase, S33
IBDKALAF_00687 1.8e-34 secG U Preprotein translocase
IBDKALAF_00688 2.4e-292 clcA P chloride
IBDKALAF_00689 1.2e-244 yifK E Amino acid permease
IBDKALAF_00690 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
IBDKALAF_00691 1.8e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
IBDKALAF_00692 1.2e-227 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
IBDKALAF_00693 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
IBDKALAF_00695 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
IBDKALAF_00696 4.1e-104 L PFAM Integrase catalytic region
IBDKALAF_00697 8.8e-15
IBDKALAF_00699 1.5e-169 whiA K May be required for sporulation
IBDKALAF_00700 2.1e-185 ybhK S Required for morphogenesis under gluconeogenic growth conditions
IBDKALAF_00701 4.1e-161 rapZ S Displays ATPase and GTPase activities
IBDKALAF_00702 4.6e-244 steT E amino acid
IBDKALAF_00703 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
IBDKALAF_00704 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
IBDKALAF_00705 6.9e-14
IBDKALAF_00706 5.1e-116 yfbR S HD containing hydrolase-like enzyme
IBDKALAF_00707 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
IBDKALAF_00708 7.2e-89 ykhA 3.1.2.20 I Thioesterase superfamily
IBDKALAF_00709 2.9e-162 aatB ET PFAM extracellular solute-binding protein, family 3
IBDKALAF_00710 1.2e-203 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
IBDKALAF_00711 1.1e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
IBDKALAF_00712 1.3e-167 lutA C Cysteine-rich domain
IBDKALAF_00713 1.3e-292 lutB C 4Fe-4S dicluster domain
IBDKALAF_00714 1.7e-136 yrjD S LUD domain
IBDKALAF_00715 1.1e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
IBDKALAF_00716 8.5e-182 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
IBDKALAF_00717 3.2e-155 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
IBDKALAF_00718 1.7e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
IBDKALAF_00719 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
IBDKALAF_00720 7.7e-31 KT PspC domain protein
IBDKALAF_00721 1.7e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
IBDKALAF_00722 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
IBDKALAF_00723 4.5e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
IBDKALAF_00724 1.4e-111 comFC S Competence protein
IBDKALAF_00725 1.6e-249 comFA L Helicase C-terminal domain protein
IBDKALAF_00726 4.3e-107 yvyE 3.4.13.9 S YigZ family
IBDKALAF_00727 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
IBDKALAF_00728 4.2e-32 cspA K Cold shock protein
IBDKALAF_00729 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
IBDKALAF_00731 1.6e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IBDKALAF_00732 5.4e-217 iscS 2.8.1.7 E Aminotransferase class V
IBDKALAF_00733 7.5e-58 XK27_04120 S Putative amino acid metabolism
IBDKALAF_00734 2.6e-224 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
IBDKALAF_00735 2.9e-122 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
IBDKALAF_00736 4.9e-117 S Repeat protein
IBDKALAF_00737 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
IBDKALAF_00738 6.9e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IBDKALAF_00739 1.1e-181 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
IBDKALAF_00740 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
IBDKALAF_00741 2.4e-245 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
IBDKALAF_00742 7e-74 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
IBDKALAF_00743 1.1e-222 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
IBDKALAF_00744 1e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IBDKALAF_00745 4.3e-141 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
IBDKALAF_00746 7.7e-219 patA 2.6.1.1 E Aminotransferase
IBDKALAF_00747 1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IBDKALAF_00748 8.5e-84 KT Putative sugar diacid recognition
IBDKALAF_00749 1.1e-218 EG GntP family permease
IBDKALAF_00750 6e-208 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
IBDKALAF_00751 2.2e-57
IBDKALAF_00753 3.8e-130 mltD CBM50 M NlpC P60 family protein
IBDKALAF_00754 5.7e-29
IBDKALAF_00755 6.7e-181 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
IBDKALAF_00756 9.8e-32 ykzG S Belongs to the UPF0356 family
IBDKALAF_00757 4.8e-79
IBDKALAF_00758 1.4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
IBDKALAF_00759 2.8e-207 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
IBDKALAF_00760 2.4e-181 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
IBDKALAF_00761 1.7e-222 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
IBDKALAF_00762 1.4e-275 lpdA 1.8.1.4 C Dehydrogenase
IBDKALAF_00763 3.7e-45 yktA S Belongs to the UPF0223 family
IBDKALAF_00764 3.8e-134 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
IBDKALAF_00765 0.0 typA T GTP-binding protein TypA
IBDKALAF_00766 3.5e-222 ftsW D Belongs to the SEDS family
IBDKALAF_00767 3e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
IBDKALAF_00768 1.6e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
IBDKALAF_00769 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
IBDKALAF_00770 1.9e-197 ylbL T Belongs to the peptidase S16 family
IBDKALAF_00771 5.8e-80 comEA L Competence protein ComEA
IBDKALAF_00772 3.1e-89 comEB 3.5.4.12 F ComE operon protein 2
IBDKALAF_00773 0.0 comEC S Competence protein ComEC
IBDKALAF_00774 3.1e-147 holA 2.7.7.7 L DNA polymerase III delta subunit
IBDKALAF_00775 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
IBDKALAF_00776 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
IBDKALAF_00777 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
IBDKALAF_00778 7.1e-164 S Tetratricopeptide repeat
IBDKALAF_00779 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
IBDKALAF_00780 2.8e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
IBDKALAF_00781 1.8e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
IBDKALAF_00782 3.6e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
IBDKALAF_00783 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
IBDKALAF_00784 7.6e-09
IBDKALAF_00785 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
IBDKALAF_00786 2.2e-246 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
IBDKALAF_00787 4.9e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
IBDKALAF_00788 5.5e-155 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
IBDKALAF_00789 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
IBDKALAF_00790 9.2e-92 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IBDKALAF_00791 7.3e-88
IBDKALAF_00792 2.4e-134 L Belongs to the 'phage' integrase family
IBDKALAF_00793 1.3e-32 S Domain of unknown function (DUF5067)
IBDKALAF_00794 2.3e-30
IBDKALAF_00795 1.1e-15 K Cro/C1-type HTH DNA-binding domain
IBDKALAF_00796 5.1e-16 S Helix-turn-helix domain
IBDKALAF_00798 1.3e-44 K COG3617 Prophage antirepressor
IBDKALAF_00801 1.1e-07
IBDKALAF_00802 1.1e-11
IBDKALAF_00804 2.4e-06 S calcium ion binding
IBDKALAF_00806 3.6e-67
IBDKALAF_00807 1.1e-54
IBDKALAF_00809 6.1e-10
IBDKALAF_00810 1.9e-28 S Bacteriophage HK97-gp10, putative tail-component
IBDKALAF_00811 7.8e-66 D Phage tail tape measure protein, TP901 family
IBDKALAF_00813 9.4e-16 tra L Transposase and inactivated derivatives, IS30 family
IBDKALAF_00814 1.1e-300 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
IBDKALAF_00816 3.9e-218 S cog cog1373
IBDKALAF_00817 1.7e-176 coaA 2.7.1.33 F Pantothenic acid kinase
IBDKALAF_00818 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
IBDKALAF_00819 8.9e-156 EG EamA-like transporter family
IBDKALAF_00820 2.8e-36 Q pyridine nucleotide-disulphide oxidoreductase
IBDKALAF_00821 0.0 helD 3.6.4.12 L DNA helicase
IBDKALAF_00822 5.7e-115 dedA S SNARE associated Golgi protein
IBDKALAF_00823 1.5e-126 3.1.3.73 G phosphoglycerate mutase
IBDKALAF_00824 3.1e-221 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IBDKALAF_00825 2.8e-33 S Transglycosylase associated protein
IBDKALAF_00827 1e-179 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IBDKALAF_00828 1.8e-221 V domain protein
IBDKALAF_00829 1.7e-93 K Transcriptional regulator (TetR family)
IBDKALAF_00830 7.5e-39 pspC KT PspC domain protein
IBDKALAF_00831 7.1e-150
IBDKALAF_00832 4e-17 3.2.1.14 GH18
IBDKALAF_00833 1.1e-80 zur P Belongs to the Fur family
IBDKALAF_00834 6e-100 gmk2 2.7.4.8 F Guanylate kinase
IBDKALAF_00835 4.9e-72 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
IBDKALAF_00836 3e-254 yfnA E Amino Acid
IBDKALAF_00837 1.4e-232 EGP Sugar (and other) transporter
IBDKALAF_00838 1.6e-114 L PFAM Integrase catalytic region
IBDKALAF_00839 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
IBDKALAF_00840 5.9e-244 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
IBDKALAF_00841 2.3e-215 iscS2 2.8.1.7 E Aminotransferase class V
IBDKALAF_00842 3.2e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IBDKALAF_00843 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
IBDKALAF_00844 7.2e-272 cydA 1.10.3.14 C ubiquinol oxidase
IBDKALAF_00845 4.5e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
IBDKALAF_00846 2.3e-311 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
IBDKALAF_00847 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
IBDKALAF_00848 1.8e-231 ndh 1.6.99.3 C NADH dehydrogenase
IBDKALAF_00849 2.5e-242 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
IBDKALAF_00850 8e-122 radC L DNA repair protein
IBDKALAF_00851 1.7e-179 mreB D cell shape determining protein MreB
IBDKALAF_00852 3.5e-152 mreC M Involved in formation and maintenance of cell shape
IBDKALAF_00853 8.7e-93 mreD M rod shape-determining protein MreD
IBDKALAF_00854 3.2e-102 glnP P ABC transporter permease
IBDKALAF_00855 1.2e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IBDKALAF_00856 1.7e-159 aatB ET ABC transporter substrate-binding protein
IBDKALAF_00857 5.3e-226 ymfF S Peptidase M16 inactive domain protein
IBDKALAF_00858 1e-248 ymfH S Peptidase M16
IBDKALAF_00859 5e-137 ymfM S Helix-turn-helix domain
IBDKALAF_00860 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IBDKALAF_00861 8.1e-227 cinA 3.5.1.42 S Belongs to the CinA family
IBDKALAF_00862 1.7e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
IBDKALAF_00863 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
IBDKALAF_00864 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
IBDKALAF_00865 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IBDKALAF_00866 4.3e-101 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
IBDKALAF_00867 1.1e-189 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
IBDKALAF_00868 5e-188 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
IBDKALAF_00869 6.2e-31 yajC U Preprotein translocase
IBDKALAF_00870 2.1e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
IBDKALAF_00871 3.7e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
IBDKALAF_00872 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
IBDKALAF_00873 4.1e-43 yrzL S Belongs to the UPF0297 family
IBDKALAF_00874 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IBDKALAF_00875 6.1e-48 yrzB S Belongs to the UPF0473 family
IBDKALAF_00876 2.7e-86 cvpA S Colicin V production protein
IBDKALAF_00877 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
IBDKALAF_00878 6.1e-54 trxA O Belongs to the thioredoxin family
IBDKALAF_00879 3e-96 yslB S Protein of unknown function (DUF2507)
IBDKALAF_00880 3.1e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
IBDKALAF_00881 9.8e-106 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
IBDKALAF_00882 1.7e-93 S Phosphoesterase
IBDKALAF_00883 1.1e-74 ykuL S (CBS) domain
IBDKALAF_00884 4.1e-56 L Transposase
IBDKALAF_00885 3.3e-39 ykuJ S Protein of unknown function (DUF1797)
IBDKALAF_00886 5.1e-179 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
IBDKALAF_00887 2.9e-198 cpoA GT4 M Glycosyltransferase, group 1 family protein
IBDKALAF_00888 2.7e-227 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
IBDKALAF_00889 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IBDKALAF_00890 2.7e-39 ptsH G phosphocarrier protein HPR
IBDKALAF_00891 6.4e-27
IBDKALAF_00892 0.0 clpE O Belongs to the ClpA ClpB family
IBDKALAF_00893 8.3e-100 S Pfam:DUF3816
IBDKALAF_00894 3e-141 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
IBDKALAF_00895 8.4e-117
IBDKALAF_00896 1.2e-155 V ABC transporter, ATP-binding protein
IBDKALAF_00897 9.3e-65 gntR1 K Transcriptional regulator, GntR family
IBDKALAF_00898 0.0 S Peptidase, M23
IBDKALAF_00899 0.0 M NlpC/P60 family
IBDKALAF_00900 3.1e-308 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
IBDKALAF_00901 9e-225 brpA K Cell envelope-like function transcriptional attenuator common domain protein
IBDKALAF_00902 7.4e-163 yueF S AI-2E family transporter
IBDKALAF_00903 0.0 csd1 3.5.1.28 G domain, Protein
IBDKALAF_00904 1.9e-155 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
IBDKALAF_00905 2.3e-198 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
IBDKALAF_00906 1.6e-108 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
IBDKALAF_00907 9.2e-161 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
IBDKALAF_00908 0.0 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
IBDKALAF_00909 2.3e-134
IBDKALAF_00910 1.2e-145 rfbJ M Glycosyl transferase family 2
IBDKALAF_00911 3e-79
IBDKALAF_00912 4e-73 S Acyltransferase family
IBDKALAF_00913 2e-81 glfT1 1.1.1.133 S Glycosyltransferase like family 2
IBDKALAF_00914 1.4e-67 S Glycosyltransferase like family
IBDKALAF_00915 9.9e-76 rgpB GT2 M Glycosyl transferase family 2
IBDKALAF_00916 3.9e-28 M biosynthesis protein
IBDKALAF_00917 7.7e-89 cps3F
IBDKALAF_00918 4.7e-76 M transferase activity, transferring glycosyl groups
IBDKALAF_00919 1.8e-209 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
IBDKALAF_00920 5.6e-219 glf 5.4.99.9 M UDP-galactopyranose mutase
IBDKALAF_00921 1.8e-24
IBDKALAF_00922 0.0 G Peptidase_C39 like family
IBDKALAF_00923 0.0 2.7.7.6 M Peptidase family M23
IBDKALAF_00924 5e-119 rfbP 2.7.8.6 M Bacterial sugar transferase
IBDKALAF_00925 2.5e-172 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
IBDKALAF_00926 4.3e-146 cps1D M Domain of unknown function (DUF4422)
IBDKALAF_00927 1.2e-135 recX 2.4.1.337 GT4 S Regulatory protein RecX
IBDKALAF_00928 4.9e-31
IBDKALAF_00929 6.6e-34 S Protein of unknown function (DUF2922)
IBDKALAF_00930 8.9e-143 yihY S Belongs to the UPF0761 family
IBDKALAF_00931 1.5e-280 yjeM E Amino Acid
IBDKALAF_00932 2.1e-255 E Arginine ornithine antiporter
IBDKALAF_00933 1.3e-220 arcT 2.6.1.1 E Aminotransferase
IBDKALAF_00934 6.5e-167 map 3.4.11.18 E Methionine Aminopeptidase
IBDKALAF_00935 1.4e-78 fld C Flavodoxin
IBDKALAF_00936 1.3e-67 gtcA S Teichoic acid glycosylation protein
IBDKALAF_00937 7.4e-20
IBDKALAF_00938 9e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
IBDKALAF_00940 4.1e-229 yfmL L DEAD DEAH box helicase
IBDKALAF_00941 5.9e-191 mocA S Oxidoreductase
IBDKALAF_00942 9.1e-62 S Domain of unknown function (DUF4828)
IBDKALAF_00943 1.1e-104 yvdD 3.2.2.10 S Belongs to the LOG family
IBDKALAF_00944 3.5e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
IBDKALAF_00945 2.4e-297 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
IBDKALAF_00946 4.3e-194 S Protein of unknown function (DUF3114)
IBDKALAF_00947 7.9e-79 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
IBDKALAF_00948 3.2e-119 ybhL S Belongs to the BI1 family
IBDKALAF_00949 4.8e-76 yhjX P Major Facilitator Superfamily
IBDKALAF_00950 1.6e-20
IBDKALAF_00951 1.1e-92 K Acetyltransferase (GNAT) family
IBDKALAF_00952 6e-76 K LytTr DNA-binding domain
IBDKALAF_00953 6.8e-67 S Protein of unknown function (DUF3021)
IBDKALAF_00954 6.1e-155 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
IBDKALAF_00955 1.4e-83 ogt 2.1.1.63 L Methyltransferase
IBDKALAF_00956 3e-124 pnb C nitroreductase
IBDKALAF_00957 3.3e-92
IBDKALAF_00958 9.5e-83 yvbK 3.1.3.25 K GNAT family
IBDKALAF_00959 1.5e-247 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
IBDKALAF_00960 3.7e-205 amtB P ammonium transporter
IBDKALAF_00961 1.2e-61 L transposase and inactivated derivatives, IS30 family
IBDKALAF_00962 4e-72
IBDKALAF_00963 2e-172
IBDKALAF_00964 5.3e-176 fecB P Periplasmic binding protein
IBDKALAF_00965 2.9e-134 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
IBDKALAF_00966 2e-129 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IBDKALAF_00967 2.5e-77 S Flavodoxin
IBDKALAF_00968 3.5e-62 moaE 2.8.1.12 H MoaE protein
IBDKALAF_00969 3.9e-32 moaD 2.8.1.12 H ThiS family
IBDKALAF_00970 1.1e-217 narK P Transporter, major facilitator family protein
IBDKALAF_00971 1.5e-158 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
IBDKALAF_00972 4.3e-175
IBDKALAF_00973 9.4e-19
IBDKALAF_00974 2.3e-116 nreC K PFAM regulatory protein LuxR
IBDKALAF_00975 1.5e-189 comP 2.7.13.3 F Sensor histidine kinase
IBDKALAF_00976 2.6e-43
IBDKALAF_00977 1.2e-95 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
IBDKALAF_00978 2e-75 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
IBDKALAF_00979 2.8e-224 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
IBDKALAF_00980 5.8e-83 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
IBDKALAF_00981 2.6e-183 moeB 2.7.7.73, 2.7.7.80 H ThiF family
IBDKALAF_00982 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
IBDKALAF_00983 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
IBDKALAF_00984 8.7e-99 narJ C nitrate reductase molybdenum cofactor assembly chaperone
IBDKALAF_00985 9.6e-129 narI 1.7.5.1 C Nitrate reductase
IBDKALAF_00986 4.2e-153 EG EamA-like transporter family
IBDKALAF_00987 9.4e-118 L Integrase
IBDKALAF_00988 3e-156 rssA S Phospholipase, patatin family
IBDKALAF_00989 4.1e-89 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
IBDKALAF_00990 3.8e-90 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
IBDKALAF_00991 1.8e-198 xerS L Belongs to the 'phage' integrase family
IBDKALAF_00993 8e-70 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
IBDKALAF_00994 1.2e-76 marR K Transcriptional regulator, MarR family
IBDKALAF_00995 2.2e-171 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IBDKALAF_00996 1.4e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
IBDKALAF_00997 3.1e-154 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
IBDKALAF_00998 1.3e-126 IQ reductase
IBDKALAF_00999 5.9e-222 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
IBDKALAF_01000 7.6e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
IBDKALAF_01001 8.6e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
IBDKALAF_01002 7.7e-255 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
IBDKALAF_01003 8.4e-143 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
IBDKALAF_01004 9.2e-136 accA 2.1.3.15, 6.4.1.2 I alpha subunit
IBDKALAF_01005 4.3e-130 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
IBDKALAF_01011 1.4e-117 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
IBDKALAF_01012 2.5e-24 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
IBDKALAF_01013 5.8e-282 2.4.1.5 GH13 G Glycosyl hydrolase family 70
IBDKALAF_01014 1.1e-170 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
IBDKALAF_01015 2.5e-248 mmuP E amino acid
IBDKALAF_01017 7.4e-67 T Toxin-antitoxin system, toxin component, MazF family
IBDKALAF_01018 5.2e-37
IBDKALAF_01019 1.8e-07 D nuclear chromosome segregation
IBDKALAF_01020 0.0 snf 2.7.11.1 KL domain protein
IBDKALAF_01021 1e-142 ywqE 3.1.3.48 GM PHP domain protein
IBDKALAF_01022 6.8e-209 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
IBDKALAF_01023 0.0 sbcC L Putative exonuclease SbcCD, C subunit
IBDKALAF_01024 2.1e-88 L nuclease
IBDKALAF_01025 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
IBDKALAF_01026 2.8e-70
IBDKALAF_01027 3.1e-101 fic D Fic/DOC family
IBDKALAF_01028 4.7e-123 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
IBDKALAF_01029 9.8e-152 3.1.3.73 G Belongs to the phosphoglycerate mutase family
IBDKALAF_01030 9.3e-32
IBDKALAF_01031 8.5e-154
IBDKALAF_01032 2.1e-24
IBDKALAF_01033 2.7e-66 XK27_01125 L PFAM IS66 Orf2 family protein
IBDKALAF_01035 2.8e-107 L Integrase core domain
IBDKALAF_01036 4.2e-109 L Bacterial dnaA protein
IBDKALAF_01040 1.4e-297 mco Q Multicopper oxidase
IBDKALAF_01041 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
IBDKALAF_01042 5.3e-64 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
IBDKALAF_01043 1.4e-54 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IBDKALAF_01044 3.8e-85 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IBDKALAF_01045 1.1e-211 yfnA E Amino Acid
IBDKALAF_01046 2.3e-61 S FRG
IBDKALAF_01047 1.3e-95 S FRG
IBDKALAF_01048 8.9e-62 L transposase and inactivated derivatives, IS30 family
IBDKALAF_01049 2.7e-94 yqeG S HAD phosphatase, family IIIA
IBDKALAF_01050 2.1e-218 yqeH S Ribosome biogenesis GTPase YqeH
IBDKALAF_01051 1.9e-47 yhbY J RNA-binding protein
IBDKALAF_01052 1.7e-119 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
IBDKALAF_01053 1.1e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
IBDKALAF_01054 4.9e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
IBDKALAF_01055 8.7e-136 yqeM Q Methyltransferase
IBDKALAF_01056 6.9e-209 ylbM S Belongs to the UPF0348 family
IBDKALAF_01057 1.4e-98 yceD S Uncharacterized ACR, COG1399
IBDKALAF_01058 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
IBDKALAF_01059 1.5e-121 K response regulator
IBDKALAF_01060 1.4e-278 arlS 2.7.13.3 T Histidine kinase
IBDKALAF_01061 4e-265 yjeM E Amino Acid
IBDKALAF_01062 1.1e-234 V MatE
IBDKALAF_01063 5.6e-68 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
IBDKALAF_01064 5e-168 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
IBDKALAF_01065 1.6e-42 acyP 3.6.1.7 C Belongs to the acylphosphatase family
IBDKALAF_01066 4.8e-145 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IBDKALAF_01067 5.3e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
IBDKALAF_01068 6.7e-59 yodB K Transcriptional regulator, HxlR family
IBDKALAF_01069 2.3e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
IBDKALAF_01070 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
IBDKALAF_01071 2.5e-115 rlpA M PFAM NLP P60 protein
IBDKALAF_01072 8e-117 udk 2.7.1.48 F Cytidine monophosphokinase
IBDKALAF_01073 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
IBDKALAF_01074 1.6e-67 yneR S Belongs to the HesB IscA family
IBDKALAF_01075 0.0 S membrane
IBDKALAF_01076 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
IBDKALAF_01077 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
IBDKALAF_01078 1.8e-101 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IBDKALAF_01079 5.8e-60 gluP 3.4.21.105 S Peptidase, S54 family
IBDKALAF_01080 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
IBDKALAF_01081 5.6e-183 glk 2.7.1.2 G Glucokinase
IBDKALAF_01082 3.4e-67 yqhL P Rhodanese-like protein
IBDKALAF_01083 5.9e-22 S Protein of unknown function (DUF3042)
IBDKALAF_01084 7e-175 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
IBDKALAF_01085 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
IBDKALAF_01086 8.4e-295 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IBDKALAF_01087 2e-97 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
IBDKALAF_01088 6.1e-32 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
IBDKALAF_01089 1.5e-40 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
IBDKALAF_01090 3.9e-12
IBDKALAF_01091 4.7e-99 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IBDKALAF_01092 4.8e-51 S Iron-sulfur cluster assembly protein
IBDKALAF_01093 2.6e-150
IBDKALAF_01094 1e-179
IBDKALAF_01095 2.8e-85 dut S Protein conserved in bacteria
IBDKALAF_01099 1.4e-110 K Transcriptional regulator
IBDKALAF_01100 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
IBDKALAF_01101 2.4e-53 ysxB J Cysteine protease Prp
IBDKALAF_01102 1.3e-44 rpmA J Belongs to the bacterial ribosomal protein bL27 family
IBDKALAF_01103 8.9e-130 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
IBDKALAF_01104 1.5e-200 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
IBDKALAF_01105 1e-114 J 2'-5' RNA ligase superfamily
IBDKALAF_01106 2.2e-70 yqhY S Asp23 family, cell envelope-related function
IBDKALAF_01107 4.7e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IBDKALAF_01108 1.4e-148 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
IBDKALAF_01109 7.6e-215 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
IBDKALAF_01110 1.3e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
IBDKALAF_01111 6.4e-154 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
IBDKALAF_01112 1.2e-149 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
IBDKALAF_01113 6.2e-76 argR K Regulates arginine biosynthesis genes
IBDKALAF_01114 5.5e-263 recN L May be involved in recombinational repair of damaged DNA
IBDKALAF_01115 7.1e-53
IBDKALAF_01116 1.3e-113 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
IBDKALAF_01117 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
IBDKALAF_01118 2.4e-207 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IBDKALAF_01119 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IBDKALAF_01120 1.4e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IBDKALAF_01121 9e-248 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IBDKALAF_01122 2.1e-129 stp 3.1.3.16 T phosphatase
IBDKALAF_01123 0.0 KLT serine threonine protein kinase
IBDKALAF_01124 1.1e-161 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
IBDKALAF_01125 4.7e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
IBDKALAF_01126 2.4e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
IBDKALAF_01127 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
IBDKALAF_01128 8.8e-57 asp S Asp23 family, cell envelope-related function
IBDKALAF_01129 0.0 yloV S DAK2 domain fusion protein YloV
IBDKALAF_01130 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IBDKALAF_01131 1e-187 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
IBDKALAF_01132 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
IBDKALAF_01133 1.2e-131 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
IBDKALAF_01134 0.0 smc D Required for chromosome condensation and partitioning
IBDKALAF_01135 5e-178 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
IBDKALAF_01136 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
IBDKALAF_01137 1.1e-248 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IBDKALAF_01138 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
IBDKALAF_01139 4.1e-40 ylqC S Belongs to the UPF0109 family
IBDKALAF_01140 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IBDKALAF_01141 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
IBDKALAF_01142 1.3e-260 yfnA E amino acid
IBDKALAF_01143 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
IBDKALAF_01144 5e-34
IBDKALAF_01145 1.2e-52 S Mazg nucleotide pyrophosphohydrolase
IBDKALAF_01146 3.3e-160 xth 3.1.11.2 L exodeoxyribonuclease III
IBDKALAF_01147 2.3e-13
IBDKALAF_01148 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
IBDKALAF_01149 1.1e-192 V Beta-lactamase
IBDKALAF_01150 6e-94 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
IBDKALAF_01151 2e-64 yhiD S MgtC family
IBDKALAF_01152 9.1e-54 S GyrI-like small molecule binding domain
IBDKALAF_01153 3e-125 ybhF_2 V AAA domain, putative AbiEii toxin, Type IV TA system
IBDKALAF_01154 2e-184 ybhR V ABC transporter
IBDKALAF_01155 1.2e-90 K Bacterial regulatory proteins, tetR family
IBDKALAF_01156 7.3e-110 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
IBDKALAF_01157 3.2e-50 azlD E Branched-chain amino acid transport
IBDKALAF_01158 4.1e-119 azlC E azaleucine resistance protein AzlC
IBDKALAF_01159 4.5e-258 K Aminotransferase class I and II
IBDKALAF_01160 5.6e-189 S amidohydrolase
IBDKALAF_01161 4.8e-19 D COG COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
IBDKALAF_01164 2.6e-22
IBDKALAF_01166 3.6e-18 L Replication protein
IBDKALAF_01167 8.7e-42 XK27_01125 L PFAM IS66 Orf2 family protein
IBDKALAF_01168 1.9e-294 L Transposase IS66 family
IBDKALAF_01169 9.9e-98 epsB M biosynthesis protein
IBDKALAF_01170 1.1e-106 ywqD 2.7.10.1 D Capsular exopolysaccharide family
IBDKALAF_01171 8.9e-49 pglC M Bacterial sugar transferase
IBDKALAF_01172 7e-87 GT4 G Glycosyl transferase 4-like
IBDKALAF_01173 6.7e-67 sacB GT2,GT4 M Stealth protein CR2, conserved region 2
IBDKALAF_01174 8.3e-43 M Pfam:DUF1792
IBDKALAF_01176 1.3e-72 cps2I S Psort location CytoplasmicMembrane, score
IBDKALAF_01177 3e-35 M Glycosyltransferase sugar-binding region containing DXD motif
IBDKALAF_01178 1.6e-28 S Glycosyltransferase, group 2 family protein
IBDKALAF_01179 3.8e-30 M COG0463 Glycosyltransferases involved in cell wall biogenesis
IBDKALAF_01180 1.1e-49 S Glycosyltransferase like family 2
IBDKALAF_01182 3.4e-29 S Acyltransferase family
IBDKALAF_01183 0.0 gtfC 2.4.1.5 GH13 G Glycosyl hydrolase family 70
IBDKALAF_01184 1.4e-72
IBDKALAF_01185 1.4e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
IBDKALAF_01186 3.5e-130 ponA V Beta-lactamase enzyme family
IBDKALAF_01187 1.7e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
IBDKALAF_01188 3.7e-216 uhpT EGP Major facilitator Superfamily
IBDKALAF_01189 4.3e-258 ytjP 3.5.1.18 E Dipeptidase
IBDKALAF_01190 5.3e-273 arcD S C4-dicarboxylate anaerobic carrier
IBDKALAF_01191 3e-181 yfeX P Peroxidase
IBDKALAF_01192 2.6e-91 lsa S ABC transporter
IBDKALAF_01193 1.7e-160 lsa S ABC transporter
IBDKALAF_01194 3e-133 I alpha/beta hydrolase fold
IBDKALAF_01195 1.8e-179 MA20_14895 S Conserved hypothetical protein 698
IBDKALAF_01196 2.4e-95 S NADPH-dependent FMN reductase
IBDKALAF_01197 1.4e-167 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
IBDKALAF_01198 1.5e-177 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
IBDKALAF_01199 9.7e-231 mntH P H( )-stimulated, divalent metal cation uptake system
IBDKALAF_01200 1.9e-79 Q Methyltransferase
IBDKALAF_01201 9.1e-116 ktrA P domain protein
IBDKALAF_01202 5.8e-239 ktrB P Potassium uptake protein
IBDKALAF_01203 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
IBDKALAF_01204 2.7e-140 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
IBDKALAF_01205 1.1e-222 G Glycosyl hydrolases family 8
IBDKALAF_01206 3.7e-42 ydaM M Glycosyl transferase family group 2
IBDKALAF_01207 3.8e-187 ydaM M Glycosyl transferase
IBDKALAF_01208 1.6e-144
IBDKALAF_01209 6.6e-125 phoU P Plays a role in the regulation of phosphate uptake
IBDKALAF_01210 3.1e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
IBDKALAF_01211 2.9e-154 pstA P Phosphate transport system permease protein PstA
IBDKALAF_01212 8.9e-151 pstC P probably responsible for the translocation of the substrate across the membrane
IBDKALAF_01213 2.3e-159 pstS P Phosphate
IBDKALAF_01214 1.3e-128 K Transcriptional regulatory protein, C-terminal domain protein
IBDKALAF_01215 6.3e-16 K Transcriptional regulator, HxlR family
IBDKALAF_01216 7.4e-186
IBDKALAF_01217 1.3e-96 2.3.1.128 K acetyltransferase
IBDKALAF_01218 5.1e-52 manA 5.3.1.8 G mannose-6-phosphate isomerase
IBDKALAF_01219 1.2e-31 manA 5.3.1.8 G mannose-6-phosphate isomerase
IBDKALAF_01220 1.2e-68 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
IBDKALAF_01221 8.9e-62 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IBDKALAF_01222 4.3e-181
IBDKALAF_01223 6.4e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IBDKALAF_01224 2.9e-183 S Phosphotransferase system, EIIC
IBDKALAF_01225 0.0 UW LPXTG-motif cell wall anchor domain protein
IBDKALAF_01227 3.8e-159 metQ_4 P Belongs to the nlpA lipoprotein family
IBDKALAF_01228 2.6e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
IBDKALAF_01229 5.1e-122 O Zinc-dependent metalloprotease
IBDKALAF_01230 6.8e-32 L Helix-turn-helix domain
IBDKALAF_01231 3e-97 dedA 3.1.3.1 S SNARE associated Golgi protein
IBDKALAF_01232 5.4e-181 galR K Transcriptional regulator
IBDKALAF_01233 3.1e-278 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
IBDKALAF_01234 2.5e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
IBDKALAF_01235 2.4e-178 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
IBDKALAF_01236 1.9e-144 ptp3 3.1.3.48 T Tyrosine phosphatase family
IBDKALAF_01237 1.5e-91 yxkA S Phosphatidylethanolamine-binding protein
IBDKALAF_01238 9.1e-36
IBDKALAF_01239 2e-52
IBDKALAF_01240 5.3e-201
IBDKALAF_01241 1.1e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
IBDKALAF_01242 2.9e-134 pnuC H nicotinamide mononucleotide transporter
IBDKALAF_01243 1.1e-155 ytbE 1.1.1.346 S Aldo keto reductase
IBDKALAF_01244 1.2e-123 K response regulator
IBDKALAF_01245 5e-179 T PhoQ Sensor
IBDKALAF_01246 9.2e-133 macB2 V ABC transporter, ATP-binding protein
IBDKALAF_01247 0.0 ysaB V FtsX-like permease family
IBDKALAF_01248 4.5e-157 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
IBDKALAF_01249 4.8e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
IBDKALAF_01250 6.2e-10 K helix_turn_helix, mercury resistance
IBDKALAF_01251 8.4e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IBDKALAF_01252 2e-195 EGP Major facilitator Superfamily
IBDKALAF_01253 6e-88 ymdB S Macro domain protein
IBDKALAF_01254 1.4e-105 K Helix-turn-helix XRE-family like proteins
IBDKALAF_01255 0.0 pepO 3.4.24.71 O Peptidase family M13
IBDKALAF_01256 1.4e-47
IBDKALAF_01257 6e-233 S Putative metallopeptidase domain
IBDKALAF_01258 4.4e-203 3.1.3.1 S associated with various cellular activities
IBDKALAF_01259 5.2e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
IBDKALAF_01260 5.9e-64 yeaO S Protein of unknown function, DUF488
IBDKALAF_01262 1.5e-118 yrkL S Flavodoxin-like fold
IBDKALAF_01263 1.5e-52
IBDKALAF_01264 1.8e-16 S Domain of unknown function (DUF4767)
IBDKALAF_01265 2.3e-30 2.1.1.72 D peptidase
IBDKALAF_01266 1.7e-47
IBDKALAF_01267 7.6e-205 nrnB S DHHA1 domain
IBDKALAF_01268 5.2e-226 S Uncharacterized protein conserved in bacteria (DUF2325)
IBDKALAF_01269 1.2e-247 brnQ U Component of the transport system for branched-chain amino acids
IBDKALAF_01270 1.1e-104 NU mannosyl-glycoprotein
IBDKALAF_01271 2.1e-140 S Putative ABC-transporter type IV
IBDKALAF_01272 1.9e-273 S ABC transporter, ATP-binding protein
IBDKALAF_01273 4.9e-18 K Helix-turn-helix domain
IBDKALAF_01274 4.5e-44 arsB 1.20.4.1 P Sodium Bile acid symporter family
IBDKALAF_01275 2.7e-62 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IBDKALAF_01276 1.8e-42 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
IBDKALAF_01277 8.6e-182 arsB 1.20.4.1 P Sodium Bile acid symporter family
IBDKALAF_01278 8.2e-72 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IBDKALAF_01279 9.4e-56 cadX K Bacterial regulatory protein, arsR family
IBDKALAF_01280 2.8e-95 cadD P Cadmium resistance transporter
IBDKALAF_01281 1.1e-13 K Transcriptional
IBDKALAF_01282 3.9e-24 L Integrase
IBDKALAF_01283 3.8e-162 L Transposase IS66 family
IBDKALAF_01284 5.3e-40 L Transposase IS66 family
IBDKALAF_01288 1.3e-263 dtpT U amino acid peptide transporter
IBDKALAF_01289 7.8e-79 yjjH S Calcineurin-like phosphoesterase
IBDKALAF_01290 5.6e-62 yjjH S Calcineurin-like phosphoesterase
IBDKALAF_01293 2.9e-111
IBDKALAF_01294 8.5e-249 EGP Major facilitator Superfamily
IBDKALAF_01295 3.5e-302 aspT P Predicted Permease Membrane Region
IBDKALAF_01296 2.2e-131 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
IBDKALAF_01297 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
IBDKALAF_01298 3.1e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IBDKALAF_01299 3.7e-151 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
IBDKALAF_01300 0.0 yhgF K Tex-like protein N-terminal domain protein
IBDKALAF_01301 3.1e-83 ydcK S Belongs to the SprT family
IBDKALAF_01303 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
IBDKALAF_01304 1.6e-185 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
IBDKALAF_01305 0.0 S Bacterial membrane protein, YfhO
IBDKALAF_01306 3.9e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IBDKALAF_01307 4.1e-169 I alpha/beta hydrolase fold
IBDKALAF_01308 3.2e-214 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
IBDKALAF_01309 1.4e-119 tcyB E ABC transporter
IBDKALAF_01310 9.8e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IBDKALAF_01311 2.4e-139 tcyA ET Belongs to the bacterial solute-binding protein 3 family
IBDKALAF_01312 6.6e-267 pepC 3.4.22.40 E Peptidase C1-like family
IBDKALAF_01313 2.2e-125 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
IBDKALAF_01314 1.9e-49 HA62_12640 S GCN5-related N-acetyl-transferase
IBDKALAF_01315 7.3e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
IBDKALAF_01316 1.5e-253 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
IBDKALAF_01317 1.1e-204 yacL S domain protein
IBDKALAF_01318 1.3e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
IBDKALAF_01319 6.1e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
IBDKALAF_01320 1.8e-136 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IBDKALAF_01321 2.7e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
IBDKALAF_01322 1.4e-15 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
IBDKALAF_01323 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
IBDKALAF_01324 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
IBDKALAF_01325 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
IBDKALAF_01326 2.8e-224 aadAT EK Aminotransferase, class I
IBDKALAF_01328 1.1e-32 M Glycosyl transferase family group 2
IBDKALAF_01329 2.8e-31 M Glycosyl transferase family group 2
IBDKALAF_01330 4e-81 M Glycosyl transferase family group 2
IBDKALAF_01331 2.4e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
IBDKALAF_01332 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
IBDKALAF_01333 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
IBDKALAF_01334 5.7e-35
IBDKALAF_01335 3.2e-38 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
IBDKALAF_01336 2.4e-56 K transcriptional regulator PadR family
IBDKALAF_01337 8.7e-81 XK27_06920 S Protein of unknown function (DUF1700)
IBDKALAF_01338 5.4e-133 S Putative adhesin
IBDKALAF_01339 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
IBDKALAF_01340 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IBDKALAF_01341 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IBDKALAF_01342 3.4e-35 nrdH O Glutaredoxin
IBDKALAF_01343 1e-87 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
IBDKALAF_01344 6.2e-292 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IBDKALAF_01345 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
IBDKALAF_01346 6.3e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
IBDKALAF_01347 2.8e-38 S Protein of unknown function (DUF2508)
IBDKALAF_01348 2.9e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
IBDKALAF_01349 2.9e-51 yaaQ S Cyclic-di-AMP receptor
IBDKALAF_01350 1.7e-182 holB 2.7.7.7 L DNA polymerase III
IBDKALAF_01351 3.1e-43 yabA L Involved in initiation control of chromosome replication
IBDKALAF_01352 2.9e-154 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
IBDKALAF_01353 1.4e-133 fat 3.1.2.21 I Acyl-ACP thioesterase
IBDKALAF_01354 3e-96 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
IBDKALAF_01355 1.7e-117 L Transposase IS66 family
IBDKALAF_01356 5.6e-18 XK27_01125 L PFAM IS66 Orf2 family protein
IBDKALAF_01359 1.3e-207 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
IBDKALAF_01361 3.3e-47 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
IBDKALAF_01362 0.0 L Helicase C-terminal domain protein
IBDKALAF_01363 4.4e-20
IBDKALAF_01364 2.2e-105 L Helix-turn-helix domain
IBDKALAF_01365 4.2e-74 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
IBDKALAF_01366 6e-199 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
IBDKALAF_01367 8.3e-21
IBDKALAF_01368 3.3e-23 glcU U sugar transport
IBDKALAF_01369 9.6e-96 lacA 2.3.1.79 S Transferase hexapeptide repeat
IBDKALAF_01370 5e-262 pgi 5.3.1.9 G Belongs to the GPI family
IBDKALAF_01371 1e-25
IBDKALAF_01373 3.1e-30 xylB 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
IBDKALAF_01374 3.6e-154 KT YcbB domain
IBDKALAF_01375 7.6e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
IBDKALAF_01376 3.3e-172 arcC 2.7.2.2 E Belongs to the carbamate kinase family
IBDKALAF_01377 1.7e-154 EG EamA-like transporter family
IBDKALAF_01378 3.2e-101 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
IBDKALAF_01379 1.2e-53 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
IBDKALAF_01380 0.0 copA 3.6.3.54 P P-type ATPase
IBDKALAF_01381 1.2e-85
IBDKALAF_01383 2.3e-56
IBDKALAF_01384 3.9e-40 yjcE P Sodium proton antiporter
IBDKALAF_01385 2.9e-116 yjcE P Sodium proton antiporter
IBDKALAF_01386 1.4e-47 yjcE P Sodium proton antiporter
IBDKALAF_01388 2.4e-92
IBDKALAF_01389 9.5e-133 M domain protein
IBDKALAF_01390 1.4e-145 M domain protein
IBDKALAF_01391 4.3e-122 M domain protein
IBDKALAF_01392 1.8e-59 M domain protein
IBDKALAF_01393 7e-19
IBDKALAF_01394 8.2e-185 ampC V Beta-lactamase
IBDKALAF_01395 8.9e-218 arcA 3.5.3.6 E Arginine
IBDKALAF_01396 2.7e-79 argR K Regulates arginine biosynthesis genes
IBDKALAF_01397 1.1e-259 E Arginine ornithine antiporter
IBDKALAF_01398 6.1e-223 arcD U Amino acid permease
IBDKALAF_01399 3e-10
IBDKALAF_01400 1.2e-134 cobQ S CobB/CobQ-like glutamine amidotransferase domain
IBDKALAF_01401 1.7e-262 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
IBDKALAF_01402 6e-108 tdk 2.7.1.21 F thymidine kinase
IBDKALAF_01403 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
IBDKALAF_01404 6.1e-165 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
IBDKALAF_01405 1.4e-195 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
IBDKALAF_01406 1.5e-228 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IBDKALAF_01407 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
IBDKALAF_01408 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IBDKALAF_01409 2e-192 yibE S overlaps another CDS with the same product name
IBDKALAF_01410 5.7e-130 yibF S overlaps another CDS with the same product name
IBDKALAF_01411 1e-232 pyrP F Permease
IBDKALAF_01412 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
IBDKALAF_01413 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IBDKALAF_01414 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
IBDKALAF_01415 3.3e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IBDKALAF_01416 1.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
IBDKALAF_01417 7.4e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
IBDKALAF_01418 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
IBDKALAF_01419 1e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
IBDKALAF_01420 1.3e-33 ywzB S Protein of unknown function (DUF1146)
IBDKALAF_01421 3e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IBDKALAF_01422 1.9e-178 mbl D Cell shape determining protein MreB Mrl
IBDKALAF_01423 1e-31 S Protein of unknown function (DUF2969)
IBDKALAF_01424 1.1e-220 rodA D Belongs to the SEDS family
IBDKALAF_01425 1.4e-47 gcvH E glycine cleavage
IBDKALAF_01426 3.4e-216 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
IBDKALAF_01427 1.3e-11 2.3.1.19 K Helix-turn-helix XRE-family like proteins
IBDKALAF_01428 3.1e-122 2.3.1.19 K Helix-turn-helix XRE-family like proteins
IBDKALAF_01429 1.2e-261 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
IBDKALAF_01430 0.0 araB 2.7.1.12, 2.7.1.16 G carbohydrate kinase FGGY
IBDKALAF_01431 3.7e-139 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
IBDKALAF_01432 4.4e-285 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
IBDKALAF_01433 1.1e-93 maa 2.3.1.79 S Maltose O-acetyltransferase
IBDKALAF_01434 7.1e-158 ytbE 1.1.1.346 S Aldo keto reductase
IBDKALAF_01435 6.3e-207 araR K Transcriptional regulator
IBDKALAF_01436 4.3e-83 usp6 T universal stress protein
IBDKALAF_01437 5.7e-46
IBDKALAF_01438 1.3e-240 rarA L recombination factor protein RarA
IBDKALAF_01439 3.5e-85 yueI S Protein of unknown function (DUF1694)
IBDKALAF_01440 6.8e-74 4.4.1.5 E Glyoxalase
IBDKALAF_01441 4.6e-137 S Membrane
IBDKALAF_01442 2.5e-138 S Belongs to the UPF0246 family
IBDKALAF_01443 6.8e-30 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
IBDKALAF_01444 1.8e-198 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
IBDKALAF_01445 1.7e-31 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
IBDKALAF_01446 8.3e-30 tra L Transposase and inactivated derivatives, IS30 family
IBDKALAF_01447 1.6e-169 moaA 4.1.99.22 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
IBDKALAF_01448 5.5e-45 yitW S Pfam:DUF59
IBDKALAF_01449 1e-68 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
IBDKALAF_01450 4.1e-50 czrA K Transcriptional regulator, ArsR family
IBDKALAF_01451 2.5e-36
IBDKALAF_01452 0.0 yhcA V ABC transporter, ATP-binding protein
IBDKALAF_01453 1.3e-117 devA 3.6.3.25 V ABC transporter, ATP-binding protein
IBDKALAF_01454 2.1e-167 hrtB V ABC transporter permease
IBDKALAF_01455 1.8e-84 ygfC K transcriptional regulator (TetR family)
IBDKALAF_01456 9.9e-191 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
IBDKALAF_01457 1.2e-286 mntH P H( )-stimulated, divalent metal cation uptake system
IBDKALAF_01458 1.5e-28
IBDKALAF_01459 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
IBDKALAF_01462 2.4e-201 yxiO S Vacuole effluxer Atg22 like
IBDKALAF_01463 1.1e-101 npp S type I phosphodiesterase nucleotide pyrophosphatase
IBDKALAF_01464 1.1e-58 npp S type I phosphodiesterase nucleotide pyrophosphatase
IBDKALAF_01465 1e-238 E amino acid
IBDKALAF_01466 2.3e-119 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IBDKALAF_01468 5.1e-220 yxjG_1 E methionine synthase, vitamin-B12 independent
IBDKALAF_01469 1.1e-28 S Cytochrome B5
IBDKALAF_01470 1.5e-74 elaA S Gnat family
IBDKALAF_01471 1.2e-120 GM NmrA-like family
IBDKALAF_01472 1.8e-50 hxlR K Transcriptional regulator, HxlR family
IBDKALAF_01473 4.1e-107 XK27_02070 S Nitroreductase family
IBDKALAF_01474 1.5e-82 K Transcriptional regulator, HxlR family
IBDKALAF_01475 4.4e-231
IBDKALAF_01476 2.2e-210 EGP Major facilitator Superfamily
IBDKALAF_01477 4.4e-255 pepC 3.4.22.40 E aminopeptidase
IBDKALAF_01478 9.9e-112 ylbE GM NAD dependent epimerase dehydratase family protein
IBDKALAF_01479 0.0 pepN 3.4.11.2 E aminopeptidase
IBDKALAF_01480 7.2e-48 K Transcriptional regulator
IBDKALAF_01481 1.6e-25 folT S ECF transporter, substrate-specific component
IBDKALAF_01482 1.9e-197 asnA 6.3.1.1 F aspartate--ammonia ligase
IBDKALAF_01483 2.7e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
IBDKALAF_01484 7.4e-121 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
IBDKALAF_01485 3.2e-193 2.7.7.65 T GGDEF domain
IBDKALAF_01486 1.7e-82
IBDKALAF_01487 2.3e-248 pgaC GT2 M Glycosyl transferase
IBDKALAF_01488 6.5e-137 T EAL domain
IBDKALAF_01489 7.2e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
IBDKALAF_01490 5.5e-59 yneR
IBDKALAF_01491 1.4e-100 qorB 1.6.5.2 GM NmrA-like family
IBDKALAF_01492 1e-159 akr5f 1.1.1.346 S reductase
IBDKALAF_01493 1.9e-145 K Transcriptional regulator
IBDKALAF_01494 6.7e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
IBDKALAF_01495 5.1e-155 ypuA S Protein of unknown function (DUF1002)
IBDKALAF_01496 2.4e-228 aadAT EK Aminotransferase, class I
IBDKALAF_01497 6.5e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
IBDKALAF_01498 1.7e-153 tesE Q hydratase
IBDKALAF_01499 1.7e-89 S Alpha beta hydrolase
IBDKALAF_01500 2.6e-12 S Alpha beta hydrolase
IBDKALAF_01501 1.6e-134 S Hydrolases of the alpha beta superfamily
IBDKALAF_01502 3.8e-85 lacA S transferase hexapeptide repeat
IBDKALAF_01503 1.3e-157 K Transcriptional regulator
IBDKALAF_01504 9.4e-17
IBDKALAF_01505 2.7e-85 C Flavodoxin
IBDKALAF_01506 2.8e-165 S Oxidoreductase, aldo keto reductase family protein
IBDKALAF_01507 3.8e-182 1.1.1.1 C nadph quinone reductase
IBDKALAF_01508 7.3e-55 yphJ 4.1.1.44 S decarboxylase
IBDKALAF_01509 1.3e-98 M Protein of unknown function (DUF3737)
IBDKALAF_01510 1.1e-225 4.4.1.8 E Aminotransferase, class I
IBDKALAF_01511 3.1e-92 S Peptidase propeptide and YPEB domain
IBDKALAF_01512 5.8e-223 T GHKL domain
IBDKALAF_01513 9.9e-118 T Transcriptional regulatory protein, C terminal
IBDKALAF_01514 3.5e-158 mleP3 S Membrane transport protein
IBDKALAF_01515 3.7e-85 L PFAM Integrase catalytic region
IBDKALAF_01516 2.6e-186 lacR K Transcriptional regulator
IBDKALAF_01517 1.7e-50 S CRISPR-associated protein (Cas_Csn2)
IBDKALAF_01518 1.3e-37 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IBDKALAF_01519 7.5e-113 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IBDKALAF_01520 2.3e-140 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
IBDKALAF_01521 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
IBDKALAF_01522 2.3e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
IBDKALAF_01523 0.0 pacL 3.6.3.8 P P-type ATPase
IBDKALAF_01524 3.4e-85 dps P Belongs to the Dps family
IBDKALAF_01525 9.2e-23 yagE E amino acid
IBDKALAF_01526 9.7e-178 yagE E amino acid
IBDKALAF_01527 1.3e-114 gph 3.1.3.18 S HAD hydrolase, family IA, variant
IBDKALAF_01528 2e-95 3.6.4.12 S PD-(D/E)XK nuclease family transposase
IBDKALAF_01529 4.6e-35 3.6.4.12 S PD-(D/E)XK nuclease family transposase
IBDKALAF_01530 4.9e-182 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
IBDKALAF_01531 8e-182 iunH2 3.2.2.1 F nucleoside hydrolase
IBDKALAF_01532 2.7e-311 uup S ABC transporter, ATP-binding protein
IBDKALAF_01533 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
IBDKALAF_01535 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
IBDKALAF_01536 5.5e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
IBDKALAF_01537 5.3e-81 S Aminoacyl-tRNA editing domain
IBDKALAF_01538 3.8e-301 ybeC E amino acid
IBDKALAF_01539 0.0 ydaO E amino acid
IBDKALAF_01540 2.7e-39
IBDKALAF_01542 1.9e-110 lssY 3.6.1.27 I Acid phosphatase homologues
IBDKALAF_01543 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
IBDKALAF_01544 1.8e-138 L PFAM transposase IS116 IS110 IS902
IBDKALAF_01545 5.7e-228 clcA_2 P Chloride transporter, ClC family
IBDKALAF_01546 8.8e-116 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
IBDKALAF_01547 1.7e-148 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
IBDKALAF_01548 6e-138 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
IBDKALAF_01549 1.9e-69 L transposase and inactivated derivatives, IS30 family
IBDKALAF_01550 9e-59 L PFAM transposase IS200-family protein
IBDKALAF_01551 1.7e-101 L PFAM Integrase catalytic region
IBDKALAF_01553 5.4e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IBDKALAF_01554 6.7e-166
IBDKALAF_01555 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IBDKALAF_01556 2.1e-243 purD 6.3.4.13 F Belongs to the GARS family
IBDKALAF_01557 4.6e-296 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
IBDKALAF_01558 8e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IBDKALAF_01559 6.2e-196 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
IBDKALAF_01560 2e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
IBDKALAF_01561 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IBDKALAF_01562 3.6e-128 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IBDKALAF_01563 4.1e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IBDKALAF_01564 4.4e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
IBDKALAF_01565 2.2e-251 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IBDKALAF_01566 3.9e-215 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
IBDKALAF_01567 2.1e-82 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
IBDKALAF_01568 1.4e-100 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
IBDKALAF_01569 5.8e-172 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
IBDKALAF_01570 3.4e-187 thrC 4.2.3.1 E Threonine synthase
IBDKALAF_01571 2.7e-24 K helix_turn_helix, arabinose operon control protein
IBDKALAF_01572 1.7e-19 mocA S Oxidoreductase
IBDKALAF_01573 4.2e-127 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
IBDKALAF_01574 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
IBDKALAF_01575 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
IBDKALAF_01576 6.6e-174 K AI-2E family transporter
IBDKALAF_01577 8.2e-229 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
IBDKALAF_01578 1e-95 ribA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IBDKALAF_01579 1.1e-113 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
IBDKALAF_01580 9.6e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
IBDKALAF_01581 6e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
IBDKALAF_01582 3.3e-172 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
IBDKALAF_01583 7.3e-247 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
IBDKALAF_01584 5e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
IBDKALAF_01585 7.1e-21 K LysR substrate binding domain
IBDKALAF_01586 1.2e-64 K DNA-binding transcription factor activity
IBDKALAF_01587 1.6e-52 azlD S branched-chain amino acid
IBDKALAF_01588 2.3e-138 azlC E AzlC protein
IBDKALAF_01589 8.3e-202 hpk31 2.7.13.3 T Histidine kinase
IBDKALAF_01590 3.8e-125 K response regulator
IBDKALAF_01591 2e-208 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
IBDKALAF_01592 4e-170 deoR K sugar-binding domain protein
IBDKALAF_01593 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
IBDKALAF_01594 3.2e-234 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
IBDKALAF_01595 4.5e-235 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
IBDKALAF_01596 3.4e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
IBDKALAF_01597 5.9e-135 XK27_01040 S Protein of unknown function (DUF1129)
IBDKALAF_01598 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
IBDKALAF_01599 1.2e-31 yyzM S Bacterial protein of unknown function (DUF951)
IBDKALAF_01600 5e-154 spo0J K Belongs to the ParB family
IBDKALAF_01601 3.6e-140 soj D Sporulation initiation inhibitor
IBDKALAF_01602 1.5e-143 noc K Belongs to the ParB family
IBDKALAF_01603 3.7e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
IBDKALAF_01604 1.1e-161 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
IBDKALAF_01605 6.6e-170 rihC 3.2.2.1 F Nucleoside
IBDKALAF_01606 1.3e-218 nupG F Nucleoside transporter
IBDKALAF_01607 2.1e-220 cycA E Amino acid permease
IBDKALAF_01608 5.5e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IBDKALAF_01609 2.6e-264 glnP P ABC transporter
IBDKALAF_01610 6.5e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
IBDKALAF_01611 6.3e-37 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
IBDKALAF_01612 3e-27 L PFAM transposase IS200-family protein
IBDKALAF_01613 5.8e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
IBDKALAF_01614 5e-200 XK27_09615 S reductase
IBDKALAF_01615 2.4e-101 nqr 1.5.1.36 S reductase
IBDKALAF_01616 7.2e-264 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IBDKALAF_01617 6.9e-17 K Transcriptional regulator, LacI family
IBDKALAF_01618 9.6e-144 K Transcriptional regulator, LacI family
IBDKALAF_01619 4.7e-260 G Major Facilitator
IBDKALAF_01620 4.8e-207 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
IBDKALAF_01621 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
IBDKALAF_01622 7e-264 L Transposase IS66 family
IBDKALAF_01624 2.8e-71 L PFAM Integrase catalytic region
IBDKALAF_01625 1.8e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
IBDKALAF_01626 2.1e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
IBDKALAF_01627 3.3e-118 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
IBDKALAF_01628 3.6e-196 coiA 3.6.4.12 S Competence protein
IBDKALAF_01629 1.6e-260 pipD E Dipeptidase
IBDKALAF_01630 3.1e-113 yjbH Q Thioredoxin
IBDKALAF_01631 2.3e-111 yjbM 2.7.6.5 S RelA SpoT domain protein
IBDKALAF_01632 8.6e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
IBDKALAF_01633 1.6e-171 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
IBDKALAF_01634 0.0 lacS G Transporter
IBDKALAF_01635 0.0 lacZ 3.2.1.23 G -beta-galactosidase
IBDKALAF_01636 6.3e-134 D nuclear chromosome segregation
IBDKALAF_01637 2.1e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
IBDKALAF_01638 4.4e-158 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
IBDKALAF_01639 1.5e-143 XK27_00940 1.2.1.70, 3.5.1.9 S Putative cyclase
IBDKALAF_01640 1.2e-83 yxjG_1 E methionine synthase, vitamin-B12 independent
IBDKALAF_01641 3.4e-129 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
IBDKALAF_01642 8.2e-224 mdtG EGP Major facilitator Superfamily
IBDKALAF_01643 1.2e-168 T Calcineurin-like phosphoesterase superfamily domain
IBDKALAF_01644 7e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IBDKALAF_01645 8.6e-50 L Transposase IS200 like
IBDKALAF_01646 9.7e-185 L transposase, IS605 OrfB family
IBDKALAF_01649 1.3e-119 sdaAB 4.3.1.17 E Serine dehydratase beta chain
IBDKALAF_01650 9.7e-142 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
IBDKALAF_01651 1.2e-105 ahpC 1.11.1.15 O Peroxiredoxin
IBDKALAF_01652 0.0 trxB2 1.8.1.9 C Thioredoxin domain
IBDKALAF_01653 3.5e-137 L PFAM Integrase catalytic region
IBDKALAF_01654 1.9e-272 pipD E Dipeptidase
IBDKALAF_01655 0.0 yjbQ P TrkA C-terminal domain protein
IBDKALAF_01656 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
IBDKALAF_01657 8.1e-290 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IBDKALAF_01658 2.4e-89
IBDKALAF_01659 7.3e-36
IBDKALAF_01660 1.6e-09 K Transcriptional regulator, HxlR family
IBDKALAF_01661 3e-163 brpA K Cell envelope-like function transcriptional attenuator common domain protein
IBDKALAF_01662 3.8e-130 epsB M biosynthesis protein
IBDKALAF_01663 2.1e-116 ywqD 2.7.10.1 D Capsular exopolysaccharide family
IBDKALAF_01664 1.2e-107 rfbP M Bacterial sugar transferase
IBDKALAF_01665 5e-132 M Glycosyl transferase 4-like
IBDKALAF_01666 1.2e-61 M Glycosyl transferases group 1
IBDKALAF_01667 1.9e-83 M Glycosyl transferases group 1
IBDKALAF_01668 4.7e-154 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
IBDKALAF_01669 6.9e-148 ykuT M mechanosensitive ion channel
IBDKALAF_01670 9.4e-37 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
IBDKALAF_01671 4.3e-16
IBDKALAF_01672 1.5e-195 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
IBDKALAF_01673 1.1e-181 ccpA K catabolite control protein A
IBDKALAF_01674 3.3e-131
IBDKALAF_01675 5.9e-132 yebC K Transcriptional regulatory protein
IBDKALAF_01676 1.1e-181 comGA NU Type II IV secretion system protein
IBDKALAF_01677 4.3e-181 comGB NU type II secretion system
IBDKALAF_01678 7.1e-47 comGC U competence protein ComGC
IBDKALAF_01679 2.4e-77 NU general secretion pathway protein
IBDKALAF_01680 1e-39
IBDKALAF_01681 2e-68
IBDKALAF_01683 9.4e-144 ytxK 2.1.1.72 L N-6 DNA Methylase
IBDKALAF_01684 1.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IBDKALAF_01685 6.1e-111 S Calcineurin-like phosphoesterase
IBDKALAF_01686 6.6e-93 yutD S Protein of unknown function (DUF1027)
IBDKALAF_01687 9.4e-133 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
IBDKALAF_01688 2.8e-101 S Protein of unknown function (DUF1461)
IBDKALAF_01689 1.6e-109 dedA S SNARE-like domain protein
IBDKALAF_01690 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
IBDKALAF_01691 1.3e-145 potB P ABC transporter permease
IBDKALAF_01692 1.9e-139 potC P ABC transporter permease
IBDKALAF_01693 4.7e-207 potD P ABC transporter
IBDKALAF_01694 2.9e-36
IBDKALAF_01695 3.7e-62
IBDKALAF_01696 2.6e-41
IBDKALAF_01697 2.5e-138 L Bacterial dnaA protein
IBDKALAF_01698 1.2e-230 L Integrase core domain
IBDKALAF_01699 9.9e-58 L PFAM transposase IS200-family protein
IBDKALAF_01700 6e-229 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
IBDKALAF_01701 4.6e-174 scrR K Transcriptional regulator, LacI family
IBDKALAF_01702 1e-24
IBDKALAF_01703 7.6e-101
IBDKALAF_01704 4.1e-212 yttB EGP Major facilitator Superfamily
IBDKALAF_01705 5.7e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
IBDKALAF_01706 1.1e-86
IBDKALAF_01707 3e-108 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
IBDKALAF_01708 2.5e-261 S Putative peptidoglycan binding domain
IBDKALAF_01709 1.7e-122 yciB M ErfK YbiS YcfS YnhG
IBDKALAF_01711 1.3e-97
IBDKALAF_01712 2.8e-216 dacA 3.4.16.4 M Belongs to the peptidase S11 family
IBDKALAF_01713 6.1e-44 S Alpha beta hydrolase
IBDKALAF_01714 6e-64 S Alpha beta hydrolase
IBDKALAF_01715 8.4e-207 gldA 1.1.1.6 C dehydrogenase
IBDKALAF_01716 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
IBDKALAF_01717 1.2e-39
IBDKALAF_01718 2.7e-125 pgm3 3.1.3.73 G phosphoglycerate mutase family
IBDKALAF_01719 2.7e-36 K Bacterial transcriptional regulator
IBDKALAF_01720 5.9e-71 IQ Enoyl-(Acyl carrier protein) reductase
IBDKALAF_01721 5.3e-273 S C4-dicarboxylate anaerobic carrier
IBDKALAF_01722 1.8e-246 nhaC C Na H antiporter NhaC
IBDKALAF_01723 1.6e-241 pbuX F xanthine permease
IBDKALAF_01724 2.3e-278 pipD E Dipeptidase
IBDKALAF_01725 2.8e-168 corA P CorA-like Mg2+ transporter protein
IBDKALAF_01726 6.3e-168 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
IBDKALAF_01727 6.6e-131 terC P membrane
IBDKALAF_01728 1.5e-55 trxA O Belongs to the thioredoxin family
IBDKALAF_01729 8.6e-235 mepA V MATE efflux family protein
IBDKALAF_01730 9.9e-55 K Transcriptional regulator, ArsR family
IBDKALAF_01731 5.1e-96 P Cadmium resistance transporter
IBDKALAF_01732 1.8e-136 XK27_08845 S ABC transporter, ATP-binding protein
IBDKALAF_01733 3.3e-153 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
IBDKALAF_01734 4.1e-181 ABC-SBP S ABC transporter
IBDKALAF_01735 2.9e-73 M PFAM NLP P60 protein
IBDKALAF_01736 7.4e-104 S Protein of unknown function (DUF3278)
IBDKALAF_01737 1e-28 WQ51_00220 K Helix-turn-helix domain
IBDKALAF_01757 4.4e-81 L Transposase IS66 family
IBDKALAF_01758 4.4e-149 L Transposase IS66 family
IBDKALAF_01760 5.6e-181 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
IBDKALAF_01761 5.2e-156 rrmA 2.1.1.187 H Methyltransferase
IBDKALAF_01762 1e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
IBDKALAF_01763 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
IBDKALAF_01764 1.2e-10 S Protein of unknown function (DUF4044)
IBDKALAF_01765 1.7e-57
IBDKALAF_01766 3.1e-77 mraZ K Belongs to the MraZ family
IBDKALAF_01767 1.2e-172 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
IBDKALAF_01768 1.3e-55 ftsL D Cell division protein FtsL
IBDKALAF_01769 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
IBDKALAF_01770 4.4e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IBDKALAF_01771 7.2e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
IBDKALAF_01772 1.6e-202 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
IBDKALAF_01773 1.2e-141 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
IBDKALAF_01774 2.5e-253 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
IBDKALAF_01775 3.5e-222 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IBDKALAF_01776 9.4e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
IBDKALAF_01777 8.3e-41 yggT S YGGT family
IBDKALAF_01778 5.4e-144 ylmH S S4 domain protein
IBDKALAF_01779 1.6e-36 divIVA D DivIVA domain protein
IBDKALAF_01789 2.3e-159 L Transposase IS66 family
IBDKALAF_01790 1.9e-53 L PFAM Integrase catalytic region
IBDKALAF_01791 3.7e-43 L Belongs to the 'phage' integrase family
IBDKALAF_01792 3.7e-23 K Cro/C1-type HTH DNA-binding domain
IBDKALAF_01793 4.7e-136 F helicase superfamily c-terminal domain
IBDKALAF_01794 1.4e-19 S Domain of unknown function (DUF1837)
IBDKALAF_01795 2.2e-73 K DNA-templated transcription, initiation
IBDKALAF_01796 1.7e-28
IBDKALAF_01797 9.2e-42
IBDKALAF_01798 2.6e-211 L Protein of unknown function (DUF2800)
IBDKALAF_01799 1.6e-97 S Protein of unknown function (DUF2815)
IBDKALAF_01800 0.0 polA_2 2.7.7.7 L DNA polymerase
IBDKALAF_01801 2.5e-70 S Psort location Cytoplasmic, score
IBDKALAF_01802 0.0 S Phage plasmid primase, P4
IBDKALAF_01803 1.3e-47 S VRR_NUC
IBDKALAF_01804 1.5e-258 L SNF2 family N-terminal domain
IBDKALAF_01805 1.1e-86
IBDKALAF_01806 7.4e-100
IBDKALAF_01807 2.9e-229 2.1.1.72 KL DNA methylase
IBDKALAF_01808 1.3e-111 S Psort location Cytoplasmic, score
IBDKALAF_01809 1.8e-30 S Domain of unknown function (DUF5049)
IBDKALAF_01810 3e-306 S overlaps another CDS with the same product name
IBDKALAF_01811 6.3e-243 S Phage portal protein
IBDKALAF_01812 2.5e-121 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
IBDKALAF_01813 2.8e-221 S Phage capsid family
IBDKALAF_01814 1.2e-42 S Phage gp6-like head-tail connector protein
IBDKALAF_01815 6.9e-68 S Phage head-tail joining protein
IBDKALAF_01816 3.6e-70 S Bacteriophage holin family
IBDKALAF_01817 6.7e-143 M Glycosyl hydrolases family 25
IBDKALAF_01818 4.7e-27
IBDKALAF_01819 2.1e-283 L Recombinase zinc beta ribbon domain
IBDKALAF_01820 9.1e-284 L Recombinase
IBDKALAF_01821 1.7e-127 cylA V ABC transporter
IBDKALAF_01822 3e-124 cylB V ABC-2 type transporter
IBDKALAF_01823 2.2e-65 K LytTr DNA-binding domain
IBDKALAF_01824 1.7e-37 S Protein of unknown function (DUF3021)
IBDKALAF_01825 1.7e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IBDKALAF_01826 1e-187 yegS 2.7.1.107 G Lipid kinase
IBDKALAF_01827 9.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IBDKALAF_01828 4.1e-278 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
IBDKALAF_01829 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IBDKALAF_01830 3.6e-202 camS S sex pheromone
IBDKALAF_01831 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
IBDKALAF_01832 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
IBDKALAF_01833 1.1e-209 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
IBDKALAF_01834 2.3e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
IBDKALAF_01835 3e-113 acmC 3.2.1.96 NU mannosyl-glycoprotein
IBDKALAF_01836 8e-140 IQ reductase
IBDKALAF_01837 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
IBDKALAF_01838 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IBDKALAF_01839 5.5e-141 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
IBDKALAF_01840 9.8e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IBDKALAF_01841 3.3e-150 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IBDKALAF_01842 3.2e-139 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IBDKALAF_01843 1.1e-62 rplQ J Ribosomal protein L17
IBDKALAF_01844 2.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IBDKALAF_01845 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
IBDKALAF_01846 6.2e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
IBDKALAF_01847 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
IBDKALAF_01848 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
IBDKALAF_01849 4.4e-123 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
IBDKALAF_01850 1.7e-238 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
IBDKALAF_01851 8.9e-64 rplO J Binds to the 23S rRNA
IBDKALAF_01852 2.9e-24 rpmD J Ribosomal protein L30
IBDKALAF_01853 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
IBDKALAF_01854 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
IBDKALAF_01855 2.1e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
IBDKALAF_01856 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
IBDKALAF_01857 4e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IBDKALAF_01858 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
IBDKALAF_01859 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
IBDKALAF_01860 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
IBDKALAF_01861 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
IBDKALAF_01862 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
IBDKALAF_01863 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
IBDKALAF_01864 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
IBDKALAF_01865 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
IBDKALAF_01866 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
IBDKALAF_01867 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
IBDKALAF_01868 4.9e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
IBDKALAF_01869 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
IBDKALAF_01870 4.3e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
IBDKALAF_01871 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
IBDKALAF_01872 2.9e-235 L Transposase
IBDKALAF_01873 1.9e-134 L Transposase
IBDKALAF_01874 4.8e-65 L Transposase
IBDKALAF_01875 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
IBDKALAF_01876 2.4e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
IBDKALAF_01877 8.6e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
IBDKALAF_01878 4.1e-108 pilD 3.4.23.43 NOU Type II secretory pathway prepilin signal peptidase PulO and related peptidases
IBDKALAF_01879 8.8e-199 ykiI
IBDKALAF_01880 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IBDKALAF_01881 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IBDKALAF_01882 3e-110 K Bacterial regulatory proteins, tetR family
IBDKALAF_01883 5e-246 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
IBDKALAF_01884 1.6e-228 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
IBDKALAF_01885 1.4e-78 K AsnC family
IBDKALAF_01886 1.6e-79 uspA T universal stress protein
IBDKALAF_01887 6.8e-44 ltrA S Bacterial low temperature requirement A protein (LtrA)
IBDKALAF_01888 1.8e-65 ltrA S Bacterial low temperature requirement A protein (LtrA)
IBDKALAF_01890 5.1e-127 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IBDKALAF_01891 1.3e-210 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
IBDKALAF_01892 5.5e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IBDKALAF_01893 1.3e-35 ynzC S UPF0291 protein
IBDKALAF_01894 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
IBDKALAF_01895 1.6e-117 plsC 2.3.1.51 I Acyltransferase
IBDKALAF_01896 2.7e-140 yabB 2.1.1.223 L Methyltransferase small domain
IBDKALAF_01897 7.1e-49 yazA L GIY-YIG catalytic domain protein
IBDKALAF_01898 2e-180 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IBDKALAF_01899 4.6e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
IBDKALAF_01900 9.3e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
IBDKALAF_01901 8.2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
IBDKALAF_01902 1.4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
IBDKALAF_01903 2.4e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
IBDKALAF_01904 5.8e-138 cdsA 2.7.7.41 I Belongs to the CDS family
IBDKALAF_01905 3.7e-235 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
IBDKALAF_01906 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
IBDKALAF_01907 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IBDKALAF_01908 9.4e-83 rimP J Required for maturation of 30S ribosomal subunits
IBDKALAF_01909 1.4e-215 nusA K Participates in both transcription termination and antitermination
IBDKALAF_01910 1e-44 ylxR K Protein of unknown function (DUF448)
IBDKALAF_01911 1.3e-48 ylxQ J ribosomal protein
IBDKALAF_01912 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
IBDKALAF_01913 6.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
IBDKALAF_01914 7.1e-164 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
IBDKALAF_01915 4.5e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
IBDKALAF_01916 2.9e-63
IBDKALAF_01917 1e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
IBDKALAF_01918 1e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
IBDKALAF_01919 0.0 dnaK O Heat shock 70 kDa protein
IBDKALAF_01920 9.5e-198 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
IBDKALAF_01921 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
IBDKALAF_01922 1e-273 pipD E Dipeptidase
IBDKALAF_01923 3.6e-199 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
IBDKALAF_01925 9.8e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
IBDKALAF_01926 7.5e-58
IBDKALAF_01927 3.1e-178 prmA J Ribosomal protein L11 methyltransferase
IBDKALAF_01928 9.7e-127 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
IBDKALAF_01929 9.4e-50
IBDKALAF_01930 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IBDKALAF_01931 1.9e-77 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
IBDKALAF_01932 4.6e-165 yniA G Phosphotransferase enzyme family
IBDKALAF_01933 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
IBDKALAF_01934 5e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IBDKALAF_01935 1.1e-262 glnPH2 P ABC transporter permease
IBDKALAF_01936 1.2e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
IBDKALAF_01937 1.1e-69 yqeY S YqeY-like protein
IBDKALAF_01938 3e-184 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
IBDKALAF_01939 1.7e-237 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
IBDKALAF_01940 6e-263 argH 4.3.2.1 E argininosuccinate lyase
IBDKALAF_01941 1.5e-82 bioY S BioY family
IBDKALAF_01942 1.4e-170 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
IBDKALAF_01943 3.2e-181 phoH T phosphate starvation-inducible protein PhoH
IBDKALAF_01944 3.3e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
IBDKALAF_01945 2.1e-59 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
IBDKALAF_01946 1.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
IBDKALAF_01947 3.8e-145 recO L Involved in DNA repair and RecF pathway recombination
IBDKALAF_01948 2e-180 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
IBDKALAF_01949 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
IBDKALAF_01950 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
IBDKALAF_01951 2.9e-207 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
IBDKALAF_01952 2.4e-220 patA 2.6.1.1 E Aminotransferase
IBDKALAF_01953 6.2e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
IBDKALAF_01954 1.1e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
IBDKALAF_01955 2.8e-235 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
IBDKALAF_01956 2e-29 S Protein of unknown function (DUF2929)
IBDKALAF_01957 0.0 dnaE 2.7.7.7 L DNA polymerase
IBDKALAF_01958 3.6e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
IBDKALAF_01959 3.3e-166 cvfB S S1 domain
IBDKALAF_01960 1.1e-161 xerD D recombinase XerD
IBDKALAF_01961 1.1e-62 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
IBDKALAF_01962 2.5e-136 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
IBDKALAF_01963 1.7e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
IBDKALAF_01964 1e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
IBDKALAF_01965 2.1e-100 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
IBDKALAF_01966 8.8e-195 ypbB 5.1.3.1 S Helix-turn-helix domain
IBDKALAF_01967 6.4e-268 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
IBDKALAF_01968 2.5e-13 M Lysin motif
IBDKALAF_01969 3.8e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
IBDKALAF_01970 1.4e-205 rpsA 1.17.7.4 J Ribosomal protein S1
IBDKALAF_01971 9.4e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
IBDKALAF_01972 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
IBDKALAF_01973 2.4e-234 S Tetratricopeptide repeat protein
IBDKALAF_01974 2.4e-223 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
IBDKALAF_01975 0.0 yfmR S ABC transporter, ATP-binding protein
IBDKALAF_01976 7.2e-191 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
IBDKALAF_01977 9.6e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
IBDKALAF_01978 1.9e-110 hlyIII S protein, hemolysin III
IBDKALAF_01979 4.9e-151 DegV S EDD domain protein, DegV family
IBDKALAF_01980 8.3e-168 ypmR E lipolytic protein G-D-S-L family
IBDKALAF_01981 8.2e-108 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
IBDKALAF_01982 4.4e-35 yozE S Belongs to the UPF0346 family
IBDKALAF_01983 2.4e-161 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
IBDKALAF_01984 4.2e-141 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IBDKALAF_01985 7.8e-160 dprA LU DNA protecting protein DprA
IBDKALAF_01986 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IBDKALAF_01987 2e-163 lacX 5.1.3.3 G Aldose 1-epimerase
IBDKALAF_01988 1.2e-104 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
IBDKALAF_01989 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
IBDKALAF_01990 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
IBDKALAF_01991 8.1e-79 F NUDIX domain
IBDKALAF_01992 8.6e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
IBDKALAF_01993 2.7e-67 yqkB S Belongs to the HesB IscA family
IBDKALAF_01994 5.6e-26
IBDKALAF_01996 6.1e-85 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
IBDKALAF_01997 3.7e-61 asp S Asp23 family, cell envelope-related function
IBDKALAF_01998 2.8e-25
IBDKALAF_01999 8e-94
IBDKALAF_02000 1.6e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
IBDKALAF_02001 4.9e-182 K Transcriptional regulator, LacI family
IBDKALAF_02002 3.1e-232 gntT EG Gluconate
IBDKALAF_02003 5.9e-296 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
IBDKALAF_02004 2.9e-96 K Acetyltransferase (GNAT) domain
IBDKALAF_02005 1.2e-46
IBDKALAF_02006 2.4e-22
IBDKALAF_02007 8.5e-44
IBDKALAF_02008 5.8e-106 L Uncharacterized conserved protein (DUF2075)
IBDKALAF_02009 0.0 L PLD-like domain
IBDKALAF_02013 8.9e-35 S Acyltransferase family
IBDKALAF_02014 1.2e-92 rfbX S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
IBDKALAF_02015 3.6e-44 M Glycosyltransferase like family 2
IBDKALAF_02016 8.3e-18 epsH M Hexapeptide repeat of succinyl-transferase
IBDKALAF_02017 7.4e-42

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)