ORF_ID e_value Gene_name EC_number CAZy COGs Description
BOONDGFI_00001 1.9e-13 E Preprotein translocase subunit SecB
BOONDGFI_00004 1.1e-65 L Transposase
BOONDGFI_00021 8.8e-142 S ABC-2 family transporter protein
BOONDGFI_00022 7.5e-109 S ABC-2 family transporter protein
BOONDGFI_00023 2.7e-117 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
BOONDGFI_00024 5.8e-126 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
BOONDGFI_00025 1.2e-32 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOONDGFI_00026 8.9e-16 hicA S HicA toxin of bacterial toxin-antitoxin,
BOONDGFI_00027 1e-30 S HicB family
BOONDGFI_00028 4.3e-27
BOONDGFI_00029 1.5e-78
BOONDGFI_00030 3.3e-55 L COG3547 Transposase and inactivated derivatives
BOONDGFI_00031 2.2e-145 L COG3547 Transposase and inactivated derivatives
BOONDGFI_00032 1.5e-225 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BOONDGFI_00033 3.6e-67
BOONDGFI_00034 3.7e-95
BOONDGFI_00035 6.8e-107 L Integrase
BOONDGFI_00037 3.9e-19 repA S Replication initiator protein A
BOONDGFI_00038 1.4e-209 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
BOONDGFI_00039 4.1e-66 2.4.1.83 GT2 S GtrA-like protein
BOONDGFI_00040 1.3e-168 yfdH GT2 M Glycosyltransferase like family 2
BOONDGFI_00041 4.7e-58 S Bacterial membrane protein, YfhO
BOONDGFI_00042 1e-85 S Bacterial membrane protein, YfhO
BOONDGFI_00043 7.8e-92 S Bacterial membrane protein, YfhO
BOONDGFI_00044 1.1e-100
BOONDGFI_00045 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BOONDGFI_00046 4e-237 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
BOONDGFI_00047 5.7e-126 S Haloacid dehalogenase-like hydrolase
BOONDGFI_00048 2.1e-114 radC L DNA repair protein
BOONDGFI_00049 1.6e-172 mreB D cell shape determining protein MreB
BOONDGFI_00050 9.7e-147 mreC M Involved in formation and maintenance of cell shape
BOONDGFI_00051 3.8e-96 mreD
BOONDGFI_00052 6.5e-13 S Protein of unknown function (DUF4044)
BOONDGFI_00053 7.1e-53 S Protein of unknown function (DUF3397)
BOONDGFI_00054 5.3e-61 L PFAM transposase, IS4 family protein
BOONDGFI_00055 6.3e-41 L PFAM transposase, IS4 family protein
BOONDGFI_00056 2.9e-49 L PFAM transposase, IS4 family protein
BOONDGFI_00057 3.5e-76 mraZ K Belongs to the MraZ family
BOONDGFI_00058 6.3e-182 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BOONDGFI_00059 9.1e-54 ftsL D Cell division protein FtsL
BOONDGFI_00060 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
BOONDGFI_00061 5.1e-176 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BOONDGFI_00062 4.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BOONDGFI_00063 6.8e-209 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BOONDGFI_00064 4.4e-131 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BOONDGFI_00065 2e-234 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BOONDGFI_00066 3.6e-204 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BOONDGFI_00067 6.9e-64 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BOONDGFI_00068 9e-47 yggT S YGGT family
BOONDGFI_00069 1.8e-147 ylmH S S4 domain protein
BOONDGFI_00070 3.7e-100 gpsB D DivIVA domain protein
BOONDGFI_00071 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BOONDGFI_00072 2.1e-31 cspA K 'Cold-shock' DNA-binding domain
BOONDGFI_00073 2.2e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
BOONDGFI_00074 4.6e-38
BOONDGFI_00075 3.8e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BOONDGFI_00076 1.5e-214 iscS 2.8.1.7 E Aminotransferase class V
BOONDGFI_00077 1.4e-56 XK27_04120 S Putative amino acid metabolism
BOONDGFI_00078 2.7e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BOONDGFI_00079 4.4e-123 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
BOONDGFI_00080 6.5e-103 S Repeat protein
BOONDGFI_00081 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BOONDGFI_00082 8e-179 L COG3547 Transposase and inactivated derivatives
BOONDGFI_00083 2.7e-163 L Transposase
BOONDGFI_00084 1.7e-205 L COG3547 Transposase and inactivated derivatives
BOONDGFI_00085 6e-20 rbsB G Periplasmic binding protein domain
BOONDGFI_00086 1.1e-96 rbsB G Periplasmic binding protein domain
BOONDGFI_00087 2.9e-54
BOONDGFI_00088 1.1e-78 K Acetyltransferase (GNAT) domain
BOONDGFI_00089 4e-206 L Probable transposase
BOONDGFI_00090 3.1e-43
BOONDGFI_00091 1.9e-23
BOONDGFI_00092 5.2e-85 ropB K Transcriptional regulator
BOONDGFI_00093 1.6e-20
BOONDGFI_00094 1.8e-133 yvpB S Peptidase_C39 like family
BOONDGFI_00095 2.5e-74 L Transposase and inactivated derivatives, IS30 family
BOONDGFI_00096 1.2e-32 L Transposase and inactivated derivatives, IS30 family
BOONDGFI_00097 1.4e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
BOONDGFI_00098 5.9e-174 degV S DegV family
BOONDGFI_00099 5.6e-164 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
BOONDGFI_00100 8.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
BOONDGFI_00101 3.7e-68 rplI J Binds to the 23S rRNA
BOONDGFI_00102 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
BOONDGFI_00103 4.3e-31 S SLAP domain
BOONDGFI_00104 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BOONDGFI_00105 9.9e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BOONDGFI_00106 4.2e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
BOONDGFI_00107 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BOONDGFI_00108 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BOONDGFI_00109 9e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BOONDGFI_00110 1.7e-34 yaaA S S4 domain protein YaaA
BOONDGFI_00111 1.5e-195 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BOONDGFI_00112 4.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BOONDGFI_00113 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
BOONDGFI_00114 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BOONDGFI_00115 3.9e-143 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BOONDGFI_00116 1.1e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BOONDGFI_00117 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BOONDGFI_00118 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
BOONDGFI_00119 4.3e-269 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BOONDGFI_00120 1.6e-280 clcA P chloride
BOONDGFI_00121 1.1e-206
BOONDGFI_00122 1.2e-18
BOONDGFI_00123 2.6e-72 EGP Sugar (and other) transporter
BOONDGFI_00124 1.6e-118 EGP Sugar (and other) transporter
BOONDGFI_00125 0.0 copA 3.6.3.54 P P-type ATPase
BOONDGFI_00126 1.4e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
BOONDGFI_00127 2e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
BOONDGFI_00128 7.9e-76 atkY K Penicillinase repressor
BOONDGFI_00129 1.5e-34
BOONDGFI_00130 1.5e-223 pbuG S permease
BOONDGFI_00131 3.5e-49 S Uncharacterised protein family (UPF0236)
BOONDGFI_00132 3.2e-242 amtB P ammonium transporter
BOONDGFI_00133 3.5e-49 S Uncharacterised protein family (UPF0236)
BOONDGFI_00134 1.3e-187 L COG2826 Transposase and inactivated derivatives, IS30 family
BOONDGFI_00135 2.3e-87 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BOONDGFI_00136 3.5e-160 L An automated process has identified a potential problem with this gene model
BOONDGFI_00137 2.5e-149 L COG2826 Transposase and inactivated derivatives, IS30 family
BOONDGFI_00138 7.8e-114 L COG2963 Transposase and inactivated derivatives
BOONDGFI_00139 2.2e-24 sagD S YcaO cyclodehydratase, ATP-ad Mg2+-binding
BOONDGFI_00141 6.1e-147 V ABC transporter
BOONDGFI_00142 6.8e-91 S domain protein
BOONDGFI_00143 2.3e-178 L Transposase
BOONDGFI_00144 6.5e-304 XK27_11280 S Psort location CytoplasmicMembrane, score
BOONDGFI_00145 1.3e-182 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BOONDGFI_00146 0.0 pepO 3.4.24.71 O Peptidase family M13
BOONDGFI_00147 7.8e-61 pdxH S Pyridoxamine 5'-phosphate oxidase
BOONDGFI_00148 7.3e-58 steT E amino acid
BOONDGFI_00149 5.4e-31 mmuP E amino acid
BOONDGFI_00150 3.2e-239 N Uncharacterized conserved protein (DUF2075)
BOONDGFI_00151 8.6e-211 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
BOONDGFI_00152 8.7e-204
BOONDGFI_00153 8.8e-99 S C4-dicarboxylate anaerobic carrier
BOONDGFI_00154 1.4e-30 S C4-dicarboxylate anaerobic carrier
BOONDGFI_00155 3.3e-48 S C4-dicarboxylate anaerobic carrier
BOONDGFI_00156 3.3e-92 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
BOONDGFI_00157 3.5e-13
BOONDGFI_00158 4.7e-102 S LexA-binding, inner membrane-associated putative hydrolase
BOONDGFI_00159 3e-37
BOONDGFI_00160 1.2e-187 malY 4.4.1.8 E Aminotransferase, class I
BOONDGFI_00161 6.4e-65 S SLAP domain
BOONDGFI_00162 6.2e-35
BOONDGFI_00163 1.7e-241 brnQ U Component of the transport system for branched-chain amino acids
BOONDGFI_00164 1.7e-70 S Protein of unknown function (DUF554)
BOONDGFI_00165 6.5e-12 yqgA S Protein of unknown function (DUF554)
BOONDGFI_00166 5.4e-17 ubiX 2.5.1.129, 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BOONDGFI_00167 1.1e-60 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BOONDGFI_00168 4.1e-61 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
BOONDGFI_00169 5.1e-09
BOONDGFI_00170 1.2e-72 2.7.1.2 GK ROK family
BOONDGFI_00171 4.1e-65 K Bacterial regulatory helix-turn-helix protein, lysR family
BOONDGFI_00172 5.1e-108 drgA C nitroreductase
BOONDGFI_00173 1.2e-126 ptlF S KR domain
BOONDGFI_00174 2.5e-95 tdh 1.1.1.14 C Zinc-binding dehydrogenase
BOONDGFI_00176 2.3e-104 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
BOONDGFI_00177 3.9e-59 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
BOONDGFI_00178 1.4e-272 pepV 3.5.1.18 E dipeptidase PepV
BOONDGFI_00179 1.3e-187 V Beta-lactamase
BOONDGFI_00180 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BOONDGFI_00181 3.6e-99
BOONDGFI_00182 1e-44
BOONDGFI_00183 8e-42 S RelB antitoxin
BOONDGFI_00184 5.2e-13 1.1.1.1 C Zinc-binding dehydrogenase
BOONDGFI_00185 1e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
BOONDGFI_00186 1.9e-261 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BOONDGFI_00187 3.6e-143 recX 2.4.1.337 GT4 S Regulatory protein RecX
BOONDGFI_00188 1.9e-86
BOONDGFI_00189 1.3e-73
BOONDGFI_00190 1.9e-158 hlyX S Transporter associated domain
BOONDGFI_00191 2.1e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BOONDGFI_00192 1e-237 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOONDGFI_00193 2.5e-43 XK27_09445 S Domain of unknown function (DUF1827)
BOONDGFI_00194 0.0 clpE O Belongs to the ClpA ClpB family
BOONDGFI_00195 5.1e-27
BOONDGFI_00196 8.5e-41 ptsH G phosphocarrier protein HPR
BOONDGFI_00197 1.3e-304 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BOONDGFI_00198 3e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BOONDGFI_00199 4.3e-135 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BOONDGFI_00200 1.5e-158 coiA 3.6.4.12 S Competence protein
BOONDGFI_00201 6.2e-111 yjbH Q Thioredoxin
BOONDGFI_00202 3.7e-108 yjbK S CYTH
BOONDGFI_00203 2.3e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
BOONDGFI_00204 1e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BOONDGFI_00205 4.7e-168 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BOONDGFI_00206 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
BOONDGFI_00207 5.8e-60 S SNARE associated Golgi protein
BOONDGFI_00208 6.3e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
BOONDGFI_00209 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
BOONDGFI_00210 2.4e-65 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
BOONDGFI_00211 1.4e-207 yubA S AI-2E family transporter
BOONDGFI_00212 5.5e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BOONDGFI_00213 1.4e-68 WQ51_03320 S Protein of unknown function (DUF1149)
BOONDGFI_00214 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
BOONDGFI_00215 6.7e-226 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
BOONDGFI_00216 1.9e-236 S Peptidase M16
BOONDGFI_00217 5.8e-132 IQ Enoyl-(Acyl carrier protein) reductase
BOONDGFI_00218 5.4e-137 ymfM S Helix-turn-helix domain
BOONDGFI_00219 1.9e-98 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BOONDGFI_00220 8.8e-193 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BOONDGFI_00221 1.2e-217 rny S Endoribonuclease that initiates mRNA decay
BOONDGFI_00222 1e-14 L COG2963 Transposase and inactivated derivatives
BOONDGFI_00223 1.8e-33 L COG2963 Transposase and inactivated derivatives
BOONDGFI_00224 1.1e-103 L An automated process has identified a potential problem with this gene model
BOONDGFI_00228 2.3e-19 K DNA-binding transcription factor activity
BOONDGFI_00229 2.3e-45 L An automated process has identified a potential problem with this gene model
BOONDGFI_00230 1.6e-45
BOONDGFI_00231 3.1e-153 mutR K Helix-turn-helix XRE-family like proteins
BOONDGFI_00232 5.8e-72 S Putative adhesin
BOONDGFI_00233 2.5e-281 V ABC transporter transmembrane region
BOONDGFI_00234 1.6e-47 S YoeB-like toxin of bacterial type II toxin-antitoxin system
BOONDGFI_00235 1.5e-49 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
BOONDGFI_00236 1.7e-202 napA P Sodium/hydrogen exchanger family
BOONDGFI_00237 0.0 cadA P P-type ATPase
BOONDGFI_00238 6.7e-81 ykuL S (CBS) domain
BOONDGFI_00239 9.4e-214 ywhK S Membrane
BOONDGFI_00240 3.2e-49
BOONDGFI_00241 4e-19 S D-Ala-teichoic acid biosynthesis protein
BOONDGFI_00242 5.7e-291 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BOONDGFI_00243 8.6e-237 dltB M MBOAT, membrane-bound O-acyltransferase family
BOONDGFI_00244 1.3e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BOONDGFI_00245 1.1e-245 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BOONDGFI_00246 1.8e-173 pbpX2 V Beta-lactamase
BOONDGFI_00248 3.8e-14
BOONDGFI_00249 3.6e-44 S CAAX protease self-immunity
BOONDGFI_00250 1.3e-28 S CAAX protease self-immunity
BOONDGFI_00251 1.4e-28
BOONDGFI_00252 2.2e-48
BOONDGFI_00253 6.5e-122 S Protein of unknown function (DUF975)
BOONDGFI_00254 7.1e-146 lysA2 M Glycosyl hydrolases family 25
BOONDGFI_00255 3.6e-283 ytgP S Polysaccharide biosynthesis protein
BOONDGFI_00256 4.3e-36
BOONDGFI_00257 2.4e-289 XK27_06780 V ABC transporter permease
BOONDGFI_00258 2.8e-55 4.1.1.105, 4.1.1.28 GH23 M Membrane
BOONDGFI_00259 2.1e-123 XK27_06785 V ABC transporter, ATP-binding protein
BOONDGFI_00260 4.9e-208 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BOONDGFI_00261 1.8e-170 S Alpha/beta hydrolase of unknown function (DUF915)
BOONDGFI_00262 0.0 clpE O AAA domain (Cdc48 subfamily)
BOONDGFI_00263 2.7e-117 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BOONDGFI_00264 6.6e-123
BOONDGFI_00265 2.7e-215 cycA E Amino acid permease
BOONDGFI_00266 1e-246 yifK E Amino acid permease
BOONDGFI_00267 1.8e-138 puuD S peptidase C26
BOONDGFI_00268 1.1e-235 steT_1 E amino acid
BOONDGFI_00269 3.4e-149 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
BOONDGFI_00270 9.7e-115 dedA S SNARE-like domain protein
BOONDGFI_00271 3.3e-80 S Protein of unknown function (DUF1461)
BOONDGFI_00272 1.2e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BOONDGFI_00273 4.8e-87 yutD S Protein of unknown function (DUF1027)
BOONDGFI_00274 4.7e-276 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
BOONDGFI_00275 1.1e-55
BOONDGFI_00276 6.5e-262 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
BOONDGFI_00277 3e-179 ccpA K catabolite control protein A
BOONDGFI_00278 1.3e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BOONDGFI_00279 1e-44
BOONDGFI_00280 3.3e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BOONDGFI_00281 1.8e-148 ykuT M mechanosensitive ion channel
BOONDGFI_00282 7.1e-115 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BOONDGFI_00283 1e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
BOONDGFI_00284 2.5e-68 yslB S Protein of unknown function (DUF2507)
BOONDGFI_00285 2.6e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BOONDGFI_00286 1.3e-53 trxA O Belongs to the thioredoxin family
BOONDGFI_00287 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BOONDGFI_00288 6.2e-51 yrzB S Belongs to the UPF0473 family
BOONDGFI_00289 1e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BOONDGFI_00290 2e-42 yrzL S Belongs to the UPF0297 family
BOONDGFI_00291 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BOONDGFI_00292 1.6e-51
BOONDGFI_00293 2.9e-62
BOONDGFI_00294 4.4e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BOONDGFI_00295 3e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
BOONDGFI_00296 1.3e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BOONDGFI_00297 4.2e-283 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BOONDGFI_00298 2.9e-35 yajC U Preprotein translocase
BOONDGFI_00299 2.8e-185 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BOONDGFI_00300 4.6e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BOONDGFI_00301 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BOONDGFI_00302 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BOONDGFI_00303 1.2e-47
BOONDGFI_00304 2e-152 levD G PTS system mannose/fructose/sorbose family IID component
BOONDGFI_00305 6.9e-140 M PTS system sorbose-specific iic component
BOONDGFI_00306 4.5e-91 2.7.1.191 G PTS system sorbose subfamily IIB component
BOONDGFI_00307 1.1e-66 levA G PTS system fructose IIA component
BOONDGFI_00310 5e-23 repA S Replication initiator protein A
BOONDGFI_00311 4.5e-54
BOONDGFI_00312 9.5e-103 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
BOONDGFI_00313 6e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BOONDGFI_00314 1.1e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BOONDGFI_00315 1.7e-276 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
BOONDGFI_00316 7.4e-74 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BOONDGFI_00317 7.8e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BOONDGFI_00318 1.1e-92 sigH K Belongs to the sigma-70 factor family
BOONDGFI_00319 2.2e-34
BOONDGFI_00320 9e-281 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
BOONDGFI_00321 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BOONDGFI_00322 5.9e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
BOONDGFI_00323 2.6e-100 nusG K Participates in transcription elongation, termination and antitermination
BOONDGFI_00324 6.9e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BOONDGFI_00325 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BOONDGFI_00326 3.6e-157 pstS P Phosphate
BOONDGFI_00327 7e-173 pstC P probably responsible for the translocation of the substrate across the membrane
BOONDGFI_00328 9.1e-156 pstA P Phosphate transport system permease protein PstA
BOONDGFI_00329 1.9e-141 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BOONDGFI_00330 1e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BOONDGFI_00331 7.5e-118 phoU P Plays a role in the regulation of phosphate uptake
BOONDGFI_00332 3.6e-26 yfdV S Membrane transport protein
BOONDGFI_00333 1.1e-22 yfdV S Membrane transport protein
BOONDGFI_00334 2.5e-119 yfdV S Membrane transport protein
BOONDGFI_00335 2e-83 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BOONDGFI_00336 5.4e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BOONDGFI_00337 1.7e-29 rsmC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
BOONDGFI_00338 2.8e-87 rsmC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
BOONDGFI_00339 6.8e-113 rsmC 2.1.1.172 J Methyltransferase
BOONDGFI_00340 7.6e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BOONDGFI_00341 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BOONDGFI_00342 1.4e-37 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BOONDGFI_00343 2.1e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BOONDGFI_00344 4.5e-33 S Protein of unknown function (DUF2508)
BOONDGFI_00345 2.8e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BOONDGFI_00346 4.9e-51 yaaQ S Cyclic-di-AMP receptor
BOONDGFI_00347 2.6e-152 holB 2.7.7.7 L DNA polymerase III
BOONDGFI_00348 5.3e-59 yabA L Involved in initiation control of chromosome replication
BOONDGFI_00349 2.2e-154 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BOONDGFI_00350 1e-128 fat 3.1.2.21 I Acyl-ACP thioesterase
BOONDGFI_00351 9.9e-86 S ECF transporter, substrate-specific component
BOONDGFI_00352 9e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
BOONDGFI_00353 1.4e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
BOONDGFI_00354 1e-193 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BOONDGFI_00355 2.3e-125 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BOONDGFI_00356 1.7e-179 S Oxidoreductase family, NAD-binding Rossmann fold
BOONDGFI_00357 6.7e-125 K UTRA
BOONDGFI_00358 1.4e-28 S Toxin ToxN, type III toxin-antitoxin system
BOONDGFI_00359 4.7e-25 L An automated process has identified a potential problem with this gene model
BOONDGFI_00360 1e-145 sufC O FeS assembly ATPase SufC
BOONDGFI_00361 7e-226 sufD O FeS assembly protein SufD
BOONDGFI_00362 3.6e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BOONDGFI_00363 1.9e-80 nifU C SUF system FeS assembly protein, NifU family
BOONDGFI_00364 7.1e-272 sufB O assembly protein SufB
BOONDGFI_00365 1.3e-54 yitW S Iron-sulfur cluster assembly protein
BOONDGFI_00366 2.5e-56 S Enterocin A Immunity
BOONDGFI_00367 4.9e-135 glcR K DeoR C terminal sensor domain
BOONDGFI_00368 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
BOONDGFI_00369 2.4e-161 rssA S Phospholipase, patatin family
BOONDGFI_00370 3.3e-11 2.7.13.3 T GHKL domain
BOONDGFI_00371 2.2e-86 S hydrolase
BOONDGFI_00372 0.0 glvC 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
BOONDGFI_00373 1.1e-142 glvR K Helix-turn-helix domain, rpiR family
BOONDGFI_00374 1.4e-73
BOONDGFI_00375 5.4e-86 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BOONDGFI_00376 6.2e-39
BOONDGFI_00377 1.2e-17 C nitroreductase
BOONDGFI_00378 3e-26 C nitroreductase
BOONDGFI_00379 2.1e-236 yhdP S Transporter associated domain
BOONDGFI_00380 1.2e-100 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
BOONDGFI_00381 5.2e-224 potE E amino acid
BOONDGFI_00382 7.5e-129 M Glycosyl hydrolases family 25
BOONDGFI_00383 5.4e-207 yfmL 3.6.4.13 L DEAD DEAH box helicase
BOONDGFI_00384 2.5e-242 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BOONDGFI_00386 2.7e-25
BOONDGFI_00387 2.5e-214 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
BOONDGFI_00388 3.1e-90 gtcA S Teichoic acid glycosylation protein
BOONDGFI_00389 1.3e-78 fld C Flavodoxin
BOONDGFI_00390 1.7e-164 map 3.4.11.18 E Methionine Aminopeptidase
BOONDGFI_00391 2.9e-152 yihY S Belongs to the UPF0761 family
BOONDGFI_00392 2.3e-167 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
BOONDGFI_00393 1.3e-215 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
BOONDGFI_00394 3.7e-216 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
BOONDGFI_00395 2.5e-214 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
BOONDGFI_00396 6.5e-47
BOONDGFI_00397 5.3e-20 D Alpha beta
BOONDGFI_00398 6.7e-96 L An automated process has identified a potential problem with this gene model
BOONDGFI_00402 1.1e-264 pepC 3.4.22.40 E Peptidase C1-like family
BOONDGFI_00403 4e-145 glcU U sugar transport
BOONDGFI_00404 1.2e-25
BOONDGFI_00405 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
BOONDGFI_00406 2.5e-159 L transposase, IS605 OrfB family
BOONDGFI_00407 1.2e-182 S AAA domain
BOONDGFI_00408 7.5e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BOONDGFI_00409 5.5e-23
BOONDGFI_00410 6e-163 czcD P cation diffusion facilitator family transporter
BOONDGFI_00411 2e-126 pgm3 G Belongs to the phosphoglycerate mutase family
BOONDGFI_00412 2.2e-134 S membrane transporter protein
BOONDGFI_00413 1.6e-63 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
BOONDGFI_00414 1.2e-108 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
BOONDGFI_00415 4.2e-71 S Protein of unknown function (DUF805)
BOONDGFI_00416 1.6e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
BOONDGFI_00417 1.7e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BOONDGFI_00418 4.6e-143 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BOONDGFI_00419 1.8e-139 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BOONDGFI_00420 1.5e-149 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BOONDGFI_00421 1.7e-151 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BOONDGFI_00422 1.1e-60 rplQ J Ribosomal protein L17
BOONDGFI_00423 1.8e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BOONDGFI_00424 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BOONDGFI_00425 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BOONDGFI_00426 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
BOONDGFI_00427 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BOONDGFI_00428 2.7e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BOONDGFI_00429 5.3e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BOONDGFI_00430 1.5e-71 rplO J Binds to the 23S rRNA
BOONDGFI_00431 2.3e-24 rpmD J Ribosomal protein L30
BOONDGFI_00432 1.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BOONDGFI_00433 4.8e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BOONDGFI_00434 9.5e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BOONDGFI_00435 7.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BOONDGFI_00436 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BOONDGFI_00437 6.1e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BOONDGFI_00438 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BOONDGFI_00439 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BOONDGFI_00440 1.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BOONDGFI_00441 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
BOONDGFI_00442 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BOONDGFI_00443 4.4e-110 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BOONDGFI_00444 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BOONDGFI_00445 3.5e-45 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BOONDGFI_00446 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BOONDGFI_00447 1.7e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BOONDGFI_00448 8.7e-105 rplD J Forms part of the polypeptide exit tunnel
BOONDGFI_00449 6.9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BOONDGFI_00450 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
BOONDGFI_00451 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BOONDGFI_00452 6e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BOONDGFI_00453 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BOONDGFI_00454 1.5e-121 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
BOONDGFI_00455 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BOONDGFI_00456 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BOONDGFI_00457 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BOONDGFI_00458 2.9e-81 yebR 1.8.4.14 T GAF domain-containing protein
BOONDGFI_00460 1.6e-08
BOONDGFI_00462 5.4e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
BOONDGFI_00463 2.3e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BOONDGFI_00464 5e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BOONDGFI_00465 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BOONDGFI_00466 9.3e-239 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BOONDGFI_00467 2.6e-61 yabR J S1 RNA binding domain
BOONDGFI_00468 5.8e-59 divIC D Septum formation initiator
BOONDGFI_00469 1.8e-34 yabO J S4 domain protein
BOONDGFI_00470 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BOONDGFI_00471 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BOONDGFI_00472 7.3e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
BOONDGFI_00473 8.4e-128 S (CBS) domain
BOONDGFI_00474 1.4e-91 K transcriptional regulator
BOONDGFI_00475 6.5e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BOONDGFI_00476 2.2e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BOONDGFI_00477 1.8e-244 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BOONDGFI_00478 8.5e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BOONDGFI_00479 1.5e-39 rpmE2 J Ribosomal protein L31
BOONDGFI_00480 1.8e-153 S Sucrose-6F-phosphate phosphohydrolase
BOONDGFI_00481 2.6e-278 ybeC E amino acid
BOONDGFI_00482 3.9e-66
BOONDGFI_00483 2e-14 K Helix-turn-helix XRE-family like proteins
BOONDGFI_00484 4.2e-127 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BOONDGFI_00485 1.5e-139 K Helix-turn-helix domain
BOONDGFI_00486 7.7e-230 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BOONDGFI_00487 1.2e-216 iscS2 2.8.1.7 E Aminotransferase class V
BOONDGFI_00488 1.5e-279 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BOONDGFI_00489 2e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BOONDGFI_00490 3.3e-80 yueI S Protein of unknown function (DUF1694)
BOONDGFI_00491 5.2e-240 rarA L recombination factor protein RarA
BOONDGFI_00492 2.5e-35
BOONDGFI_00493 2.3e-78 usp6 T universal stress protein
BOONDGFI_00494 4e-215 rodA D Belongs to the SEDS family
BOONDGFI_00495 8.6e-34 S Protein of unknown function (DUF2969)
BOONDGFI_00496 1.2e-48 yidD S Could be involved in insertion of integral membrane proteins into the membrane
BOONDGFI_00497 2.1e-177 mbl D Cell shape determining protein MreB Mrl
BOONDGFI_00498 3.4e-30 ywzB S Protein of unknown function (DUF1146)
BOONDGFI_00499 6.5e-54 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
BOONDGFI_00500 3.1e-238 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BOONDGFI_00501 2.9e-171 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BOONDGFI_00502 2.2e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BOONDGFI_00503 4.9e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BOONDGFI_00504 2e-54 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BOONDGFI_00505 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BOONDGFI_00506 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
BOONDGFI_00507 3.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BOONDGFI_00508 1.9e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BOONDGFI_00509 3.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BOONDGFI_00510 6.9e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BOONDGFI_00511 2.2e-113 tdk 2.7.1.21 F thymidine kinase
BOONDGFI_00512 5.5e-245 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
BOONDGFI_00515 1.9e-194 ampC V Beta-lactamase
BOONDGFI_00516 4.3e-40 EGP Major facilitator Superfamily
BOONDGFI_00517 4.7e-127 EGP Major facilitator Superfamily
BOONDGFI_00518 1.1e-15 EGP Major facilitator Superfamily
BOONDGFI_00519 9.2e-261 pgi 5.3.1.9 G Belongs to the GPI family
BOONDGFI_00520 1.9e-107 vanZ V VanZ like family
BOONDGFI_00521 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BOONDGFI_00522 2.4e-270 yclK 2.7.13.3 T Histidine kinase
BOONDGFI_00523 1.6e-129 K Transcriptional regulatory protein, C terminal
BOONDGFI_00524 2.4e-60 S SdpI/YhfL protein family
BOONDGFI_00525 1.6e-169 manA 5.3.1.8 G mannose-6-phosphate isomerase
BOONDGFI_00526 1.3e-223 patB 4.4.1.8 E Aminotransferase, class I
BOONDGFI_00527 4.7e-31 M Protein of unknown function (DUF3737)
BOONDGFI_00528 1.3e-33 M Protein of unknown function (DUF3737)
BOONDGFI_00530 2.8e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BOONDGFI_00531 4.3e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
BOONDGFI_00532 1.2e-80 comGF U Putative Competence protein ComGF
BOONDGFI_00533 1e-41
BOONDGFI_00534 2.1e-73
BOONDGFI_00535 2e-42 comGC U competence protein ComGC
BOONDGFI_00536 3.8e-174 comGB NU type II secretion system
BOONDGFI_00537 6.7e-176 comGA NU Type II IV secretion system protein
BOONDGFI_00538 2.6e-132 yebC K Transcriptional regulatory protein
BOONDGFI_00539 3.9e-90 S VanZ like family
BOONDGFI_00541 1.5e-294 E Amino acid permease
BOONDGFI_00542 3.2e-183 D Alpha beta
BOONDGFI_00543 3.8e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BOONDGFI_00544 0.0 bglP G phosphotransferase system
BOONDGFI_00545 3e-132 licT K CAT RNA binding domain
BOONDGFI_00546 3e-215 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
BOONDGFI_00547 1.5e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BOONDGFI_00548 1e-117
BOONDGFI_00549 1.9e-147 S Sucrose-6F-phosphate phosphohydrolase
BOONDGFI_00550 4.4e-149 S hydrolase
BOONDGFI_00551 7.6e-255 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BOONDGFI_00552 7.8e-169 ybbR S YbbR-like protein
BOONDGFI_00553 1e-148 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BOONDGFI_00554 6.4e-204 potD P ABC transporter
BOONDGFI_00555 6.5e-124 potC P ABC transporter permease
BOONDGFI_00556 1.7e-129 potB P ABC transporter permease
BOONDGFI_00557 5.9e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BOONDGFI_00558 7e-164 murB 1.3.1.98 M Cell wall formation
BOONDGFI_00559 1.4e-98 dnaQ 2.7.7.7 L DNA polymerase III
BOONDGFI_00560 6.4e-90 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
BOONDGFI_00561 1e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
BOONDGFI_00562 2.8e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BOONDGFI_00563 2e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
BOONDGFI_00564 1.8e-95
BOONDGFI_00565 3.4e-143 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BOONDGFI_00566 9.3e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
BOONDGFI_00567 8.4e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BOONDGFI_00568 1.2e-188 cggR K Putative sugar-binding domain
BOONDGFI_00570 2.1e-54
BOONDGFI_00571 1.8e-65
BOONDGFI_00572 8.3e-115
BOONDGFI_00573 2.8e-271 ycaM E amino acid
BOONDGFI_00574 2e-149 S haloacid dehalogenase-like hydrolase
BOONDGFI_00575 0.0 S SH3-like domain
BOONDGFI_00576 6.7e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BOONDGFI_00577 1.1e-170 whiA K May be required for sporulation
BOONDGFI_00578 2.9e-193 ybhK S Required for morphogenesis under gluconeogenic growth conditions
BOONDGFI_00579 1.4e-164 rapZ S Displays ATPase and GTPase activities
BOONDGFI_00580 1e-80 S Short repeat of unknown function (DUF308)
BOONDGFI_00581 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
BOONDGFI_00582 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BOONDGFI_00583 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
BOONDGFI_00584 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
BOONDGFI_00585 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
BOONDGFI_00586 4e-286 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
BOONDGFI_00587 7e-217 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
BOONDGFI_00588 7e-201 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BOONDGFI_00589 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BOONDGFI_00590 2.1e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BOONDGFI_00591 5.5e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BOONDGFI_00592 3.9e-147 tatD L hydrolase, TatD family
BOONDGFI_00593 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BOONDGFI_00594 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
BOONDGFI_00595 7.4e-107 S TPM domain
BOONDGFI_00596 2.8e-90 comEB 3.5.4.12 F MafB19-like deaminase
BOONDGFI_00597 1.4e-192 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
BOONDGFI_00598 3.8e-113 E Belongs to the SOS response-associated peptidase family
BOONDGFI_00600 4.9e-114
BOONDGFI_00601 1.7e-76 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BOONDGFI_00602 2.1e-70 hsp O Belongs to the small heat shock protein (HSP20) family
BOONDGFI_00603 5.3e-253 pepC 3.4.22.40 E aminopeptidase
BOONDGFI_00604 7.1e-175 oppF P Belongs to the ABC transporter superfamily
BOONDGFI_00605 2.1e-199 oppD P Belongs to the ABC transporter superfamily
BOONDGFI_00606 4.1e-184 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
BOONDGFI_00607 2.5e-140 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
BOONDGFI_00608 1.6e-208 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BOONDGFI_00609 4.1e-300 oppA E ABC transporter, substratebinding protein
BOONDGFI_00610 8.5e-301 oppA E ABC transporter, substratebinding protein
BOONDGFI_00611 1e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
BOONDGFI_00612 7.9e-257 pepC 3.4.22.40 E aminopeptidase
BOONDGFI_00614 3.5e-27
BOONDGFI_00615 1e-17
BOONDGFI_00616 1.4e-242 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BOONDGFI_00617 8.1e-260 S Fibronectin type III domain
BOONDGFI_00618 0.0 XK27_08315 M Sulfatase
BOONDGFI_00619 1.5e-109 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BOONDGFI_00620 3.5e-197 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BOONDGFI_00621 3.4e-100 G Aldose 1-epimerase
BOONDGFI_00622 4.7e-58 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
BOONDGFI_00623 1.9e-53 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
BOONDGFI_00624 6.4e-108 K UTRA domain
BOONDGFI_00625 2.1e-290 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BOONDGFI_00626 4.4e-51 S Aldo keto reductase
BOONDGFI_00627 2.5e-27 S Aldo keto reductase
BOONDGFI_00628 1.8e-28 S Aldo keto reductase
BOONDGFI_00629 1.1e-58 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
BOONDGFI_00630 9.9e-100 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
BOONDGFI_00631 1.5e-81
BOONDGFI_00632 1.6e-34 C FMN_bind
BOONDGFI_00633 3.2e-300 I Protein of unknown function (DUF2974)
BOONDGFI_00634 2.3e-104 3.6.1.55 F NUDIX domain
BOONDGFI_00635 1.6e-202 pbpX1 V Beta-lactamase
BOONDGFI_00636 5.7e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BOONDGFI_00637 4.8e-213 aspC 2.6.1.1 E Aminotransferase
BOONDGFI_00638 4.7e-140 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BOONDGFI_00639 2.3e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BOONDGFI_00640 5.2e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BOONDGFI_00641 3.6e-78 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BOONDGFI_00642 2.7e-249 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BOONDGFI_00643 1.9e-261 lysC 2.7.2.4 E Belongs to the aspartokinase family
BOONDGFI_00644 7.8e-188 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BOONDGFI_00645 8.2e-274 yjeM E Amino Acid
BOONDGFI_00646 6.4e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
BOONDGFI_00647 1.4e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BOONDGFI_00648 4.3e-210 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BOONDGFI_00649 1.6e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BOONDGFI_00650 1.4e-150
BOONDGFI_00651 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BOONDGFI_00652 7e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BOONDGFI_00653 1.6e-128 S Uncharacterised protein family (UPF0236)
BOONDGFI_00654 7.8e-258 yfnA E amino acid
BOONDGFI_00655 3.2e-56 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BOONDGFI_00656 3.8e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BOONDGFI_00657 4.5e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
BOONDGFI_00658 3.2e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BOONDGFI_00659 1.9e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
BOONDGFI_00660 4.2e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BOONDGFI_00661 5.1e-119 ung2 3.2.2.27 L Uracil-DNA glycosylase
BOONDGFI_00662 9.1e-147 E GDSL-like Lipase/Acylhydrolase family
BOONDGFI_00663 1.7e-111 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BOONDGFI_00664 1.5e-37 ynzC S UPF0291 protein
BOONDGFI_00665 4.2e-30 yneF S Uncharacterised protein family (UPF0154)
BOONDGFI_00666 1.5e-295 mdlA V ABC transporter
BOONDGFI_00667 4.6e-300 mdlB V ABC transporter
BOONDGFI_00668 0.0 pepO 3.4.24.71 O Peptidase family M13
BOONDGFI_00669 1.3e-226 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
BOONDGFI_00670 5.1e-113 plsC 2.3.1.51 I Acyltransferase
BOONDGFI_00671 1.2e-196 yabB 2.1.1.223 L Methyltransferase small domain
BOONDGFI_00672 1.2e-140 rpsB J Belongs to the universal ribosomal protein uS2 family
BOONDGFI_00673 1.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BOONDGFI_00674 7e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
BOONDGFI_00675 3.4e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BOONDGFI_00676 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BOONDGFI_00677 3.5e-146 cdsA 2.7.7.41 I Belongs to the CDS family
BOONDGFI_00678 8.8e-197 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
BOONDGFI_00679 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BOONDGFI_00680 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BOONDGFI_00682 1.3e-187 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
BOONDGFI_00683 1.5e-133 manY G PTS system
BOONDGFI_00684 1.6e-171 manN G system, mannose fructose sorbose family IID component
BOONDGFI_00685 1.4e-62 manO S Domain of unknown function (DUF956)
BOONDGFI_00686 2.2e-73 K Transcriptional regulator
BOONDGFI_00687 3.7e-85 maa S transferase hexapeptide repeat
BOONDGFI_00688 2.3e-222 cycA E Amino acid permease
BOONDGFI_00689 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BOONDGFI_00690 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BOONDGFI_00691 1.3e-15
BOONDGFI_00692 1.7e-97 yagE E amino acid
BOONDGFI_00693 3.5e-42
BOONDGFI_00694 1.3e-87 UW LPXTG-motif cell wall anchor domain protein
BOONDGFI_00695 4e-78 S LPXTG cell wall anchor motif
BOONDGFI_00696 1.1e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BOONDGFI_00697 9.2e-107 4.1.1.44 S Carboxymuconolactone decarboxylase family
BOONDGFI_00698 6.4e-37
BOONDGFI_00699 1.1e-71 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
BOONDGFI_00700 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
BOONDGFI_00701 1.8e-259 S TerB-C domain
BOONDGFI_00702 6.6e-251 P P-loop Domain of unknown function (DUF2791)
BOONDGFI_00703 0.0 lhr L DEAD DEAH box helicase
BOONDGFI_00704 5.1e-60
BOONDGFI_00705 4.2e-138 S Uncharacterized protein conserved in bacteria (DUF2263)
BOONDGFI_00706 2e-45 3.6.4.12 S PD-(D/E)XK nuclease family transposase
BOONDGFI_00709 2.9e-128 XK27_08435 K UTRA
BOONDGFI_00710 3.4e-227 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
BOONDGFI_00711 9.4e-119
BOONDGFI_00712 4.9e-77 M1-431 S Protein of unknown function (DUF1706)
BOONDGFI_00713 2.6e-219 L Transposase
BOONDGFI_00714 7.9e-71 yeaL S Protein of unknown function (DUF441)
BOONDGFI_00715 2.7e-10
BOONDGFI_00716 8e-146 cbiQ P cobalt transport
BOONDGFI_00717 0.0 ykoD P ABC transporter, ATP-binding protein
BOONDGFI_00718 1.3e-94 S UPF0397 protein
BOONDGFI_00719 1.4e-65 S Domain of unknown function DUF1828
BOONDGFI_00720 4.2e-53
BOONDGFI_00721 8.4e-168 citR K Putative sugar-binding domain
BOONDGFI_00722 1.3e-241 yjjP S Putative threonine/serine exporter
BOONDGFI_00723 1.8e-95 yxkA S Phosphatidylethanolamine-binding protein
BOONDGFI_00724 2.4e-26
BOONDGFI_00726 1.6e-22 M domain protein
BOONDGFI_00728 1.3e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BOONDGFI_00729 3.2e-175 prmA J Ribosomal protein L11 methyltransferase
BOONDGFI_00730 3.2e-59
BOONDGFI_00731 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BOONDGFI_00732 3.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BOONDGFI_00733 1.2e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
BOONDGFI_00734 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BOONDGFI_00735 5e-221 patA 2.6.1.1 E Aminotransferase
BOONDGFI_00737 2.5e-217 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BOONDGFI_00738 2.3e-85 pipD E Dipeptidase
BOONDGFI_00739 1.1e-232 S LPXTG cell wall anchor motif
BOONDGFI_00740 6.1e-148 S Putative ABC-transporter type IV
BOONDGFI_00741 2.5e-98 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
BOONDGFI_00742 1.7e-85 S ECF transporter, substrate-specific component
BOONDGFI_00743 2.1e-59 S Domain of unknown function (DUF4430)
BOONDGFI_00744 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
BOONDGFI_00745 1.5e-173 K AI-2E family transporter
BOONDGFI_00746 4.9e-102 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
BOONDGFI_00747 1.3e-11
BOONDGFI_00748 2.7e-39
BOONDGFI_00749 2.8e-129 XK27_08845 S ABC transporter, ATP-binding protein
BOONDGFI_00750 6.9e-119 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
BOONDGFI_00751 1.9e-170 ABC-SBP S ABC transporter
BOONDGFI_00752 1.7e-133 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
BOONDGFI_00753 2e-258 tetP J elongation factor G
BOONDGFI_00754 5.7e-144 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
BOONDGFI_00755 1.8e-28
BOONDGFI_00756 4.5e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BOONDGFI_00757 2.9e-167 yniA G Phosphotransferase enzyme family
BOONDGFI_00758 1.3e-159 xth 3.1.11.2 L exodeoxyribonuclease III
BOONDGFI_00759 1.1e-34 E amino acid
BOONDGFI_00760 9.5e-206 E amino acid
BOONDGFI_00761 0.0 L Helicase C-terminal domain protein
BOONDGFI_00762 3.3e-194 pbpX1 V Beta-lactamase
BOONDGFI_00763 5.1e-69 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
BOONDGFI_00764 1.4e-11
BOONDGFI_00765 4.1e-163 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
BOONDGFI_00766 6e-126 hsdM 2.1.1.72 V type I restriction-modification system
BOONDGFI_00767 4.3e-132 hsdM 2.1.1.72 V type I restriction-modification system
BOONDGFI_00768 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
BOONDGFI_00769 6.1e-226 S response to antibiotic
BOONDGFI_00770 9e-92
BOONDGFI_00771 3.1e-122
BOONDGFI_00772 5.9e-90
BOONDGFI_00773 3.5e-126 dkgA 1.1.1.346 S L-ascorbic acid biosynthetic process
BOONDGFI_00774 5.4e-71 O OsmC-like protein
BOONDGFI_00775 4.7e-208 EGP Major facilitator Superfamily
BOONDGFI_00776 7.5e-57 sptS 2.7.13.3 T Histidine kinase
BOONDGFI_00777 1.4e-123 sptS 2.7.13.3 T Histidine kinase
BOONDGFI_00778 6.1e-80 K response regulator
BOONDGFI_00779 9.6e-52 L An automated process has identified a potential problem with this gene model
BOONDGFI_00780 4.3e-16
BOONDGFI_00781 1.1e-57
BOONDGFI_00782 5.3e-144 L An automated process has identified a potential problem with this gene model
BOONDGFI_00783 7.9e-34 C coenzyme F420-1:gamma-L-glutamate ligase activity
BOONDGFI_00785 1.1e-37 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
BOONDGFI_00786 2e-18 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
BOONDGFI_00788 1e-31
BOONDGFI_00789 4e-210 V ABC transporter transmembrane region
BOONDGFI_00792 1.1e-36
BOONDGFI_00793 1.2e-109 K WHG domain
BOONDGFI_00794 5.4e-95 nqr 1.5.1.36 S NADPH-dependent FMN reductase
BOONDGFI_00795 1.3e-96 azr 1.5.1.36 S NADPH-dependent FMN reductase
BOONDGFI_00796 2.5e-149 3.1.3.48 T Tyrosine phosphatase family
BOONDGFI_00797 8.6e-181 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BOONDGFI_00798 7.3e-84 cvpA S Colicin V production protein
BOONDGFI_00799 1.8e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
BOONDGFI_00800 3.9e-148 noc K Belongs to the ParB family
BOONDGFI_00801 3.2e-136 soj D Sporulation initiation inhibitor
BOONDGFI_00802 2.5e-153 spo0J K Belongs to the ParB family
BOONDGFI_00803 3.7e-44 yyzM S Bacterial protein of unknown function (DUF951)
BOONDGFI_00804 4.7e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BOONDGFI_00805 9.9e-138 XK27_01040 S Protein of unknown function (DUF1129)
BOONDGFI_00806 2.1e-56 V ABC transporter, ATP-binding protein
BOONDGFI_00807 4.3e-234 V ABC transporter, ATP-binding protein
BOONDGFI_00808 0.0 V ABC transporter
BOONDGFI_00809 1.5e-121 K response regulator
BOONDGFI_00810 4.6e-208 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
BOONDGFI_00811 3.2e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BOONDGFI_00812 7.2e-146 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
BOONDGFI_00813 3.1e-86 L transposase, IS605 OrfB family
BOONDGFI_00814 2.6e-98 L transposase, IS605 OrfB family
BOONDGFI_00815 4.5e-35 S Enterocin A Immunity
BOONDGFI_00816 6.6e-34 yozG K Transcriptional regulator
BOONDGFI_00817 7.1e-33
BOONDGFI_00818 9.7e-15
BOONDGFI_00819 1.5e-26
BOONDGFI_00820 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
BOONDGFI_00821 1.1e-67 S CAAX protease self-immunity
BOONDGFI_00822 3.3e-261 frdC 1.3.5.4 C FAD binding domain
BOONDGFI_00823 1.2e-266 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
BOONDGFI_00824 1.7e-34
BOONDGFI_00825 6.4e-88 metI P ABC transporter permease
BOONDGFI_00826 5.7e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BOONDGFI_00827 2.2e-162 metQ1 P Belongs to the nlpA lipoprotein family
BOONDGFI_00828 0.0 aha1 P E1-E2 ATPase
BOONDGFI_00829 2.8e-15 ps301 K sequence-specific DNA binding
BOONDGFI_00830 3.1e-95 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BOONDGFI_00831 3.1e-186 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BOONDGFI_00832 3.2e-248 yifK E Amino acid permease
BOONDGFI_00834 3e-38 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BOONDGFI_00835 7.2e-93 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BOONDGFI_00836 1.5e-98 3.6.1.27 I Acid phosphatase homologues
BOONDGFI_00837 8.9e-129 yitS S Uncharacterised protein, DegV family COG1307
BOONDGFI_00838 8.1e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BOONDGFI_00839 1.3e-66 S Domain of unknown function (DUF4767)
BOONDGFI_00840 8.7e-84 C nitroreductase
BOONDGFI_00841 1.8e-122 gmuR K UTRA
BOONDGFI_00842 2.8e-218 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BOONDGFI_00843 2.4e-68 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BOONDGFI_00844 5.4e-69 S Domain of unknown function (DUF3284)
BOONDGFI_00845 3.3e-30 gepA K Protein of unknown function (DUF4065)
BOONDGFI_00846 8.2e-241 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BOONDGFI_00847 2.8e-77
BOONDGFI_00848 3.9e-141 M NlpC/P60 family
BOONDGFI_00849 7.8e-154 S Cysteine-rich secretory protein family
BOONDGFI_00850 2.1e-09 S Cysteine-rich secretory protein family
BOONDGFI_00851 2.3e-192 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BOONDGFI_00852 1.2e-181 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BOONDGFI_00853 1.2e-144 epsB M biosynthesis protein
BOONDGFI_00854 3.3e-117 ywqD 2.7.10.1 D Capsular exopolysaccharide family
BOONDGFI_00855 4.8e-145 ywqE 3.1.3.48 GM PHP domain protein
BOONDGFI_00856 4.1e-121 rfbP M Bacterial sugar transferase
BOONDGFI_00857 6.8e-83 cpsF M Oligosaccharide biosynthesis protein Alg14 like
BOONDGFI_00858 1.1e-76 pssE S Glycosyltransferase family 28 C-terminal domain
BOONDGFI_00859 8.8e-151 GT2,GT4 S Haloacid dehalogenase-like hydrolase
BOONDGFI_00860 2.7e-53 M Glycosyltransferase, group 1 family protein
BOONDGFI_00861 3.5e-82 epsJ GT2 S Glycosyltransferase like family 2
BOONDGFI_00862 3.8e-67 2.7.8.12 M Glycosyltransferase sugar-binding region containing DXD motif
BOONDGFI_00863 1.3e-35 S Bacterial transferase hexapeptide (six repeats)
BOONDGFI_00864 6.2e-40
BOONDGFI_00865 3.1e-129 S Membrane protein involved in the export of O-antigen and teichoic acid
BOONDGFI_00866 2.5e-20 2.3.1.30 E Hexapeptide repeat of succinyl-transferase
BOONDGFI_00867 6.6e-240 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOONDGFI_00868 1.8e-19 cps1D M Domain of unknown function (DUF4422)
BOONDGFI_00869 7.1e-26 GT2 S Glycosyl transferase family group 2
BOONDGFI_00870 7.5e-236 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOONDGFI_00872 6.2e-151 S hydrolase
BOONDGFI_00873 3.4e-132 gntR K UbiC transcription regulator-associated domain protein
BOONDGFI_00874 1.2e-174 rihB 3.2.2.1 F Nucleoside
BOONDGFI_00875 0.0 kup P Transport of potassium into the cell
BOONDGFI_00876 2.6e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BOONDGFI_00877 1e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BOONDGFI_00879 5.9e-162 2.7.7.12 C Domain of unknown function (DUF4931)
BOONDGFI_00880 3.6e-233 G Bacterial extracellular solute-binding protein
BOONDGFI_00881 3e-115 S SLAP domain
BOONDGFI_00882 2.4e-151 S Protein of unknown function (DUF2974)
BOONDGFI_00883 7.5e-107 glnP P ABC transporter permease
BOONDGFI_00884 5.1e-108 gluC P ABC transporter permease
BOONDGFI_00885 4e-150 glnH ET ABC transporter substrate-binding protein
BOONDGFI_00886 2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BOONDGFI_00887 4.3e-226 L transposase, IS605 OrfB family
BOONDGFI_00888 6.8e-113 udk 2.7.1.48 F Zeta toxin
BOONDGFI_00889 8.8e-183 EGP Major facilitator superfamily
BOONDGFI_00890 3.5e-100 S ABC-type cobalt transport system, permease component
BOONDGFI_00891 0.0 V ABC transporter transmembrane region
BOONDGFI_00892 3.6e-289 XK27_09600 V ABC transporter, ATP-binding protein
BOONDGFI_00893 5.7e-80 K Transcriptional regulator, MarR family
BOONDGFI_00894 3.2e-147 glnH ET ABC transporter
BOONDGFI_00895 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
BOONDGFI_00896 8.6e-90
BOONDGFI_00897 2.8e-31
BOONDGFI_00898 6e-307 ybiT S ABC transporter, ATP-binding protein
BOONDGFI_00899 1.9e-208 pepA E M42 glutamyl aminopeptidase
BOONDGFI_00900 9.6e-217 mdtG EGP Major facilitator Superfamily
BOONDGFI_00901 2.1e-258 emrY EGP Major facilitator Superfamily
BOONDGFI_00902 2e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BOONDGFI_00903 2.9e-238 pyrP F Permease
BOONDGFI_00904 3.4e-141 S reductase
BOONDGFI_00905 3.5e-203 L transposase, IS605 OrfB family
BOONDGFI_00906 7.2e-184 S SLAP domain
BOONDGFI_00907 1.7e-139 S Bacteriocin helveticin-J
BOONDGFI_00908 1.6e-16 S Bacteriocin helveticin-J
BOONDGFI_00909 2.5e-158
BOONDGFI_00910 5.1e-75 2.3.1.128 K Acetyltransferase (GNAT) domain
BOONDGFI_00911 0.0 4.2.1.53 S Myosin-crossreactive antigen
BOONDGFI_00912 4.5e-91 yxdD K Bacterial regulatory proteins, tetR family
BOONDGFI_00913 8.9e-241 emrY EGP Major facilitator Superfamily
BOONDGFI_00918 2.1e-96 MA20_25245 K Acetyltransferase (GNAT) domain
BOONDGFI_00921 1.4e-27 cspA K Cold shock protein
BOONDGFI_00923 1.5e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BOONDGFI_00924 1.1e-243 nhaC C Na H antiporter NhaC
BOONDGFI_00925 2.1e-46
BOONDGFI_00926 2.4e-119 ybhL S Belongs to the BI1 family
BOONDGFI_00927 8.2e-112 S Protein of unknown function (DUF1211)
BOONDGFI_00928 3e-170 yegS 2.7.1.107 G Lipid kinase
BOONDGFI_00929 2.9e-276 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BOONDGFI_00930 2.4e-259 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BOONDGFI_00931 5.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BOONDGFI_00932 2.5e-206 camS S sex pheromone
BOONDGFI_00933 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BOONDGFI_00934 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
BOONDGFI_00935 7.1e-102 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
BOONDGFI_00937 1.7e-84 ydcK S Belongs to the SprT family
BOONDGFI_00938 1.7e-136 M Glycosyltransferase sugar-binding region containing DXD motif
BOONDGFI_00939 1.3e-257 epsU S Polysaccharide biosynthesis protein
BOONDGFI_00940 1.5e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
BOONDGFI_00941 0.0 pacL 3.6.3.8 P P-type ATPase
BOONDGFI_00942 5.2e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BOONDGFI_00943 4e-281 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BOONDGFI_00944 2e-200 csaB M Glycosyl transferases group 1
BOONDGFI_00945 1.4e-133 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
BOONDGFI_00946 9.4e-187 L transposase, IS605 OrfB family
BOONDGFI_00947 6.7e-55 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
BOONDGFI_00948 8.9e-122 gntR1 K UTRA
BOONDGFI_00949 2.3e-212
BOONDGFI_00952 1.6e-89
BOONDGFI_00953 4.5e-109 pfoS S Phosphotransferase system, EIIC
BOONDGFI_00954 2.5e-25 pfoS S Phosphotransferase system, EIIC
BOONDGFI_00956 4e-82 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
BOONDGFI_00957 2.6e-172 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
BOONDGFI_00958 1.8e-130 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
BOONDGFI_00959 1.1e-116 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
BOONDGFI_00960 6.1e-100 G Histidine phosphatase superfamily (branch 1)
BOONDGFI_00961 9e-112 G Phosphoglycerate mutase family
BOONDGFI_00962 1.8e-195 D nuclear chromosome segregation
BOONDGFI_00963 8.9e-55 M LysM domain protein
BOONDGFI_00964 5.6e-13
BOONDGFI_00965 6.6e-18 3.2.1.4 GH5,GH9 M domain protein
BOONDGFI_00966 7.5e-71 L Transposase
BOONDGFI_00967 3.2e-41 L PFAM transposase, IS4 family protein
BOONDGFI_00968 1.3e-84 L PFAM transposase, IS4 family protein
BOONDGFI_00969 3.2e-95 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
BOONDGFI_00970 1.2e-214 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
BOONDGFI_00971 1.4e-167 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BOONDGFI_00972 7.2e-158 L An automated process has identified a potential problem with this gene model
BOONDGFI_00973 1.3e-127 L Transposase DDE domain
BOONDGFI_00974 1.5e-141 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
BOONDGFI_00975 5e-229 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
BOONDGFI_00976 9.8e-98 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
BOONDGFI_00977 1e-134 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
BOONDGFI_00978 2.7e-183 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BOONDGFI_00979 6.5e-19 S Sugar efflux transporter for intercellular exchange
BOONDGFI_00980 2.4e-101 L Transposase and inactivated derivatives, IS30 family
BOONDGFI_00981 1.6e-222 oxlT P Major Facilitator Superfamily
BOONDGFI_00982 3.8e-70 L Transposase and inactivated derivatives, IS30 family
BOONDGFI_00983 6.6e-218 yceI EGP Major facilitator Superfamily
BOONDGFI_00984 1.1e-153 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, C-terminal domain
BOONDGFI_00985 2.4e-30 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOONDGFI_00986 2.4e-27 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOONDGFI_00987 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
BOONDGFI_00988 2.4e-167 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
BOONDGFI_00989 4e-139 fruR K DeoR C terminal sensor domain
BOONDGFI_00992 4.7e-216 L transposase, IS605 OrfB family
BOONDGFI_00993 1.5e-46
BOONDGFI_00994 1.6e-177 S Oxidoreductase family, NAD-binding Rossmann fold
BOONDGFI_00995 3.7e-92 gepA K Protein of unknown function (DUF4065)
BOONDGFI_00996 1.1e-24 gepA K Protein of unknown function (DUF4065)
BOONDGFI_00997 0.0 yjbQ P TrkA C-terminal domain protein
BOONDGFI_00998 3.4e-205 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
BOONDGFI_00999 4e-218 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BOONDGFI_01000 9.8e-12 K DNA-templated transcription, initiation
BOONDGFI_01001 1.1e-12 K DNA-templated transcription, initiation
BOONDGFI_01003 2.1e-152 S SLAP domain
BOONDGFI_01004 2.9e-36 S Protein of unknown function (DUF2922)
BOONDGFI_01005 7.9e-29
BOONDGFI_01008 7.5e-86
BOONDGFI_01009 0.0 kup P Transport of potassium into the cell
BOONDGFI_01010 1.4e-40 L transposase, IS605 OrfB family
BOONDGFI_01011 1.9e-101 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BOONDGFI_01012 1.6e-222 pbuX F xanthine permease
BOONDGFI_01013 1.4e-158 msmR K AraC-like ligand binding domain
BOONDGFI_01014 1.8e-283 pipD E Dipeptidase
BOONDGFI_01015 6.7e-76 S Haloacid dehalogenase-like hydrolase
BOONDGFI_01016 9e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BOONDGFI_01017 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BOONDGFI_01018 2.6e-52 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BOONDGFI_01019 1.8e-66 S Domain of unknown function (DUF1934)
BOONDGFI_01020 4.7e-268 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
BOONDGFI_01021 5.5e-43
BOONDGFI_01022 6.5e-149 GK ROK family
BOONDGFI_01023 8.7e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BOONDGFI_01024 2.1e-207 S SLAP domain
BOONDGFI_01025 4e-229 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOONDGFI_01026 1.4e-26
BOONDGFI_01027 3.9e-90
BOONDGFI_01028 1.5e-104 S SLAP domain
BOONDGFI_01029 7.2e-208 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BOONDGFI_01030 7.7e-149 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
BOONDGFI_01031 1e-38 veg S Biofilm formation stimulator VEG
BOONDGFI_01032 1.9e-24 S Uncharacterised protein family (UPF0236)
BOONDGFI_01033 2.3e-213 mdtG EGP Major facilitator Superfamily
BOONDGFI_01034 5.7e-167
BOONDGFI_01035 1.2e-58 lysM M LysM domain
BOONDGFI_01037 0.0 pepN 3.4.11.2 E aminopeptidase
BOONDGFI_01038 1e-247 dtpT U amino acid peptide transporter
BOONDGFI_01039 1.8e-24
BOONDGFI_01040 1.1e-183 S Putative peptidoglycan binding domain
BOONDGFI_01041 5.9e-197 L transposase, IS605 OrfB family
BOONDGFI_01042 4.3e-84 2.7.7.12 C Domain of unknown function (DUF4931)
BOONDGFI_01043 3.4e-120
BOONDGFI_01044 7.1e-141 S Belongs to the UPF0246 family
BOONDGFI_01045 3.5e-140 aroD S Alpha/beta hydrolase family
BOONDGFI_01046 1.8e-110 G phosphoglycerate mutase
BOONDGFI_01047 3.5e-94 ygfC K Bacterial regulatory proteins, tetR family
BOONDGFI_01048 1e-166 hrtB V ABC transporter permease
BOONDGFI_01049 8.3e-117 devA 3.6.3.25 V ABC transporter, ATP-binding protein
BOONDGFI_01050 4.2e-272 pipD E Dipeptidase
BOONDGFI_01051 1.5e-69 ktrB P Potassium uptake protein
BOONDGFI_01052 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
BOONDGFI_01053 5e-78 C Flavodoxin
BOONDGFI_01054 3e-113 3.6.1.27 I Acid phosphatase homologues
BOONDGFI_01055 2.3e-105 lacA 2.3.1.79 S Transferase hexapeptide repeat
BOONDGFI_01056 7e-206 pbpX1 V Beta-lactamase
BOONDGFI_01057 1.7e-148 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
BOONDGFI_01058 1.3e-91 S ECF-type riboflavin transporter, S component
BOONDGFI_01059 4e-231 S Putative peptidoglycan binding domain
BOONDGFI_01060 3.4e-59 mepA V MATE efflux family protein
BOONDGFI_01061 5.1e-160 mepA V MATE efflux family protein
BOONDGFI_01062 2.3e-256 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
BOONDGFI_01063 1.9e-33
BOONDGFI_01064 5.4e-15 fic D Fic/DOC family
BOONDGFI_01065 1.9e-24 fic D Fic/DOC family
BOONDGFI_01066 2.8e-60
BOONDGFI_01067 2.9e-293 P ABC transporter
BOONDGFI_01068 1.8e-295 V ABC-type multidrug transport system, ATPase and permease components
BOONDGFI_01069 1.3e-67 S Putative adhesin
BOONDGFI_01070 1.3e-58 ypaA S Protein of unknown function (DUF1304)
BOONDGFI_01073 2.7e-168 psaA P Belongs to the bacterial solute-binding protein 9 family
BOONDGFI_01076 1.6e-216 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BOONDGFI_01077 4.1e-262 qacA EGP Major facilitator Superfamily
BOONDGFI_01078 2.5e-146 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
BOONDGFI_01079 7.3e-118 3.6.1.27 I Acid phosphatase homologues
BOONDGFI_01080 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
BOONDGFI_01081 9.2e-295 ytgP S Polysaccharide biosynthesis protein
BOONDGFI_01082 2.5e-178 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
BOONDGFI_01083 5.1e-23 dhaL 2.7.1.121 S Dak2
BOONDGFI_01084 5.2e-72 infB UW LPXTG-motif cell wall anchor domain protein
BOONDGFI_01085 2.1e-20
BOONDGFI_01086 2e-58 CO Thioredoxin
BOONDGFI_01087 4.4e-115 M1-798 K Rhodanese Homology Domain
BOONDGFI_01088 2.2e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BOONDGFI_01089 7.3e-16 frnE Q DSBA-like thioredoxin domain
BOONDGFI_01090 8.6e-13 frnE Q DSBA-like thioredoxin domain
BOONDGFI_01091 6.3e-36 frnE Q DSBA-like thioredoxin domain
BOONDGFI_01092 3e-29 3.6.4.12 S PD-(D/E)XK nuclease family transposase
BOONDGFI_01093 6.5e-62 M the current gene model (or a revised gene model) may contain a
BOONDGFI_01094 0.0 L Transposase
BOONDGFI_01095 8.8e-18
BOONDGFI_01096 3.4e-21 XK27_01125 L IS66 Orf2 like protein
BOONDGFI_01097 2.5e-48 S SLAP domain
BOONDGFI_01098 5.2e-98 S SLAP domain
BOONDGFI_01100 0.0 oppA E ABC transporter substrate-binding protein
BOONDGFI_01101 2.1e-21
BOONDGFI_01102 1.3e-32
BOONDGFI_01103 1.7e-114 papP P ABC transporter, permease protein
BOONDGFI_01104 4.8e-117 P ABC transporter permease
BOONDGFI_01105 8.2e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BOONDGFI_01106 1.7e-162 cjaA ET ABC transporter substrate-binding protein
BOONDGFI_01107 2.5e-52 S Iron-sulfur cluster assembly protein
BOONDGFI_01108 4.8e-149 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
BOONDGFI_01109 6.6e-119 sdaAB 4.3.1.17 E Serine dehydratase beta chain
BOONDGFI_01110 9.7e-46
BOONDGFI_01111 1.4e-96 S Cysteine-rich secretory protein family
BOONDGFI_01112 6.2e-48
BOONDGFI_01113 3.3e-204 G Major Facilitator Superfamily
BOONDGFI_01114 7.6e-51
BOONDGFI_01115 5.7e-46 S Domain of unknown function (DUF4160)
BOONDGFI_01117 4.2e-142 L COG2963 Transposase and inactivated derivatives
BOONDGFI_01118 6.2e-145
BOONDGFI_01119 6.6e-162
BOONDGFI_01120 3.2e-135
BOONDGFI_01121 3.4e-263 glnA 6.3.1.2 E glutamine synthetase
BOONDGFI_01122 4.6e-71 ynbB 4.4.1.1 P aluminum resistance
BOONDGFI_01123 1.7e-87 ynbB 4.4.1.1 P aluminum resistance
BOONDGFI_01124 1.4e-48 ynbB 4.4.1.1 P aluminum resistance
BOONDGFI_01125 2e-169 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BOONDGFI_01126 4.2e-68 yqhL P Rhodanese-like protein
BOONDGFI_01127 5.6e-33 yqgQ S Bacterial protein of unknown function (DUF910)
BOONDGFI_01128 8.6e-114 gluP 3.4.21.105 S Rhomboid family
BOONDGFI_01129 1.7e-99 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BOONDGFI_01130 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BOONDGFI_01131 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
BOONDGFI_01132 3.8e-165 S membrane
BOONDGFI_01133 4.2e-292 S membrane
BOONDGFI_01134 1.5e-169 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
BOONDGFI_01135 1.6e-132 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
BOONDGFI_01136 1.2e-25 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
BOONDGFI_01137 5e-78 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
BOONDGFI_01138 1.1e-78 marR K Transcriptional regulator
BOONDGFI_01139 1.4e-178 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BOONDGFI_01140 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BOONDGFI_01141 3.7e-168 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
BOONDGFI_01142 1.2e-126 IQ reductase
BOONDGFI_01143 1.3e-229 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
BOONDGFI_01144 3.7e-79 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
BOONDGFI_01145 1.7e-72 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
BOONDGFI_01146 1.5e-258 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
BOONDGFI_01147 6e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BOONDGFI_01148 9.1e-144 accA 2.1.3.15, 6.4.1.2 I alpha subunit
BOONDGFI_01149 1.9e-133 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
BOONDGFI_01150 1.1e-189 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
BOONDGFI_01151 3.8e-88 bioY S BioY family
BOONDGFI_01152 7.3e-186 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOONDGFI_01153 1.5e-95 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
BOONDGFI_01154 2.8e-183 P secondary active sulfate transmembrane transporter activity
BOONDGFI_01155 2.9e-46 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BOONDGFI_01156 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
BOONDGFI_01157 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
BOONDGFI_01158 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
BOONDGFI_01159 9.7e-118 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
BOONDGFI_01160 4.1e-206 msmX P Belongs to the ABC transporter superfamily
BOONDGFI_01161 2e-209 malE G Bacterial extracellular solute-binding protein
BOONDGFI_01162 2.6e-247 malF P Binding-protein-dependent transport system inner membrane component
BOONDGFI_01163 5.3e-153 malG P ABC transporter permease
BOONDGFI_01164 1e-42 ymdB S Macro domain protein
BOONDGFI_01165 4.5e-29 tnpR L Resolvase, N terminal domain
BOONDGFI_01167 7.6e-71 M domain protein
BOONDGFI_01168 3.8e-232 cpdA S Calcineurin-like phosphoesterase
BOONDGFI_01169 3.1e-217 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
BOONDGFI_01170 5.2e-69 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BOONDGFI_01171 2.1e-105 ypsA S Belongs to the UPF0398 family
BOONDGFI_01172 5e-116 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BOONDGFI_01173 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
BOONDGFI_01174 3.9e-113 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BOONDGFI_01175 7.4e-115 dnaD L DnaD domain protein
BOONDGFI_01176 2.6e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
BOONDGFI_01177 2.9e-90 ypmB S Protein conserved in bacteria
BOONDGFI_01178 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
BOONDGFI_01179 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
BOONDGFI_01180 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
BOONDGFI_01181 1.9e-164 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
BOONDGFI_01182 1.6e-177 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
BOONDGFI_01183 4.6e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
BOONDGFI_01184 7.2e-181 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
BOONDGFI_01185 1.6e-255 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
BOONDGFI_01186 4.7e-177
BOONDGFI_01187 2.4e-141
BOONDGFI_01188 7.2e-106 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BOONDGFI_01189 7.8e-28
BOONDGFI_01190 1.8e-253 rarA L recombination factor protein RarA
BOONDGFI_01191 2.4e-125
BOONDGFI_01192 4.5e-141
BOONDGFI_01193 1.9e-142
BOONDGFI_01194 1.4e-122 skfE V ATPases associated with a variety of cellular activities
BOONDGFI_01195 3.9e-60 yvoA_1 K Transcriptional regulator, GntR family
BOONDGFI_01196 6.8e-242 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
BOONDGFI_01197 1e-153 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BOONDGFI_01198 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
BOONDGFI_01199 4.6e-68 mutT 3.6.1.55 F NUDIX domain
BOONDGFI_01200 5.2e-124 S Peptidase family M23
BOONDGFI_01201 3.5e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BOONDGFI_01202 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BOONDGFI_01203 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
BOONDGFI_01204 3.3e-177 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
BOONDGFI_01205 2.9e-134 recO L Involved in DNA repair and RecF pathway recombination
BOONDGFI_01206 1.6e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BOONDGFI_01207 5e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BOONDGFI_01208 1.2e-174 phoH T phosphate starvation-inducible protein PhoH
BOONDGFI_01209 2.7e-68 yqeY S YqeY-like protein
BOONDGFI_01210 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
BOONDGFI_01211 2.6e-152 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
BOONDGFI_01212 1.4e-90 S Peptidase family M23
BOONDGFI_01213 6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
BOONDGFI_01214 1.1e-107
BOONDGFI_01215 1.1e-37 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BOONDGFI_01216 3.9e-61 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BOONDGFI_01218 5.2e-24 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
BOONDGFI_01219 7.3e-123 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
BOONDGFI_01220 8.7e-244 thrC 4.2.3.1 E Threonine synthase
BOONDGFI_01221 1.7e-58 lysC 2.7.2.4 E Belongs to the aspartokinase family
BOONDGFI_01222 6.6e-125 lysC 2.7.2.4 E Belongs to the aspartokinase family
BOONDGFI_01223 9.6e-102 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
BOONDGFI_01224 8e-14
BOONDGFI_01225 2.1e-58
BOONDGFI_01226 1.5e-104 K LysR substrate binding domain
BOONDGFI_01227 1.2e-18
BOONDGFI_01228 1.1e-209 S Sterol carrier protein domain
BOONDGFI_01229 3.4e-97 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
BOONDGFI_01230 1.4e-162 arcC 2.7.2.2 E Belongs to the carbamate kinase family
BOONDGFI_01231 1.9e-189 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BOONDGFI_01232 1.1e-204 arcA 3.5.3.6 E Arginine
BOONDGFI_01233 8.2e-154 lysR5 K LysR substrate binding domain
BOONDGFI_01234 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
BOONDGFI_01235 7.6e-83 3.4.21.96 S SLAP domain
BOONDGFI_01236 4.6e-53 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BOONDGFI_01237 2.5e-93 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BOONDGFI_01238 3.6e-63 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BOONDGFI_01239 3.4e-146 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
BOONDGFI_01240 2.3e-31 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BOONDGFI_01241 7.5e-118 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BOONDGFI_01242 7e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BOONDGFI_01243 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
BOONDGFI_01244 1.1e-100 srtA 3.4.22.70 M sortase family
BOONDGFI_01245 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BOONDGFI_01246 4.5e-22
BOONDGFI_01247 7.8e-200 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BOONDGFI_01248 0.0 dnaK O Heat shock 70 kDa protein
BOONDGFI_01249 8.2e-81 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BOONDGFI_01250 5e-185 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BOONDGFI_01251 1.5e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
BOONDGFI_01252 1.7e-165 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BOONDGFI_01253 8e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BOONDGFI_01254 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BOONDGFI_01255 3.5e-46 rplGA J ribosomal protein
BOONDGFI_01256 3e-47 ylxR K Protein of unknown function (DUF448)
BOONDGFI_01257 5.9e-195 nusA K Participates in both transcription termination and antitermination
BOONDGFI_01258 8e-82 rimP J Required for maturation of 30S ribosomal subunits
BOONDGFI_01259 1.2e-114
BOONDGFI_01260 7e-170 hprA 1.1.1.29 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BOONDGFI_01261 2.3e-45
BOONDGFI_01262 9.2e-46
BOONDGFI_01263 4.8e-18 ptsG 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
BOONDGFI_01264 1.3e-22 ptsG 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
BOONDGFI_01265 4e-218 naiP EGP Major facilitator Superfamily
BOONDGFI_01266 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
BOONDGFI_01267 5.5e-292 oppA E ABC transporter
BOONDGFI_01268 1.3e-213 Q Imidazolonepropionase and related amidohydrolases
BOONDGFI_01269 4.6e-62 psiE S Phosphate-starvation-inducible E
BOONDGFI_01271 3e-223 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BOONDGFI_01272 3.1e-286 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
BOONDGFI_01273 5.9e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
BOONDGFI_01274 1.1e-223 L COG2963 Transposase and inactivated derivatives
BOONDGFI_01275 7.5e-74 M NlpC/P60 family
BOONDGFI_01276 7.8e-150 EG EamA-like transporter family
BOONDGFI_01277 4.6e-109
BOONDGFI_01278 2.8e-77
BOONDGFI_01279 2e-59 XK27_05540 S DUF218 domain
BOONDGFI_01280 4.8e-103 XK27_05540 S DUF218 domain
BOONDGFI_01281 8.9e-134 yheS_2 S ATPases associated with a variety of cellular activities
BOONDGFI_01282 3.4e-32 yheS_2 S ATPases associated with a variety of cellular activities
BOONDGFI_01283 7.3e-83
BOONDGFI_01284 6.8e-57
BOONDGFI_01285 1.2e-241 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BOONDGFI_01286 1.2e-246 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BOONDGFI_01287 2.6e-183 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BOONDGFI_01290 2.9e-201 4.2.1.126 S Bacterial protein of unknown function (DUF871)
BOONDGFI_01291 3e-195 asnA 6.3.1.1 F aspartate--ammonia ligase
BOONDGFI_01292 3.5e-19 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
BOONDGFI_01293 2.9e-157 psaA P Belongs to the bacterial solute-binding protein 9 family
BOONDGFI_01294 4.7e-117 fhuC P ABC transporter
BOONDGFI_01295 2.6e-130 znuB U ABC 3 transport family
BOONDGFI_01296 2.6e-234 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
BOONDGFI_01297 8.6e-71 lctP C L-lactate permease
BOONDGFI_01298 6.5e-50 lctP C L-lactate permease
BOONDGFI_01299 2.7e-21 lctP C L-lactate permease
BOONDGFI_01300 4.6e-43 lctP C L-lactate permease
BOONDGFI_01301 1e-41 S Enterocin A Immunity
BOONDGFI_01302 2e-49 Z012_06740 S Fic/DOC family
BOONDGFI_01303 2.4e-27 Z012_06740 S Fic/DOC family
BOONDGFI_01304 0.0 pepF E oligoendopeptidase F
BOONDGFI_01305 2.5e-212 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BOONDGFI_01306 3.6e-52 S Protein of unknown function (DUF554)
BOONDGFI_01307 3.2e-98 rimL J Acetyltransferase (GNAT) domain
BOONDGFI_01308 1e-55
BOONDGFI_01309 6.4e-290 S ABC transporter
BOONDGFI_01310 4.4e-138 thrE S Putative threonine/serine exporter
BOONDGFI_01311 7.6e-80 S Threonine/Serine exporter, ThrE
BOONDGFI_01312 2.5e-118 S CAAX protease self-immunity
BOONDGFI_01313 1.9e-195 S DUF218 domain
BOONDGFI_01314 0.0 macB_3 V ABC transporter, ATP-binding protein
BOONDGFI_01315 2.9e-97 S ECF transporter, substrate-specific component
BOONDGFI_01316 1.2e-157 yeaE S Aldo/keto reductase family
BOONDGFI_01317 1.1e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BOONDGFI_01318 6.1e-101 ybbH_2 K rpiR family
BOONDGFI_01319 1.8e-142 S Bacterial protein of unknown function (DUF871)
BOONDGFI_01320 1.9e-190 yfeW 3.4.16.4 V Beta-lactamase
BOONDGFI_01321 1.1e-124 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BOONDGFI_01322 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
BOONDGFI_01323 7.3e-166 arbZ I Phosphate acyltransferases
BOONDGFI_01324 1.1e-162 arbY M Glycosyl transferase family 8
BOONDGFI_01325 9.1e-186 arbY M Glycosyl transferase family 8
BOONDGFI_01326 2.9e-143 arbx M Glycosyl transferase family 8
BOONDGFI_01327 9.6e-130 arbV 2.3.1.51 I Acyl-transferase
BOONDGFI_01328 1.6e-29 L Putative transposase DNA-binding domain
BOONDGFI_01329 3e-120
BOONDGFI_01331 4.2e-33
BOONDGFI_01333 1.1e-130 K response regulator
BOONDGFI_01334 2.5e-304 vicK 2.7.13.3 T Histidine kinase
BOONDGFI_01335 1.9e-242 yycH S YycH protein
BOONDGFI_01336 1.4e-147 yycI S YycH protein
BOONDGFI_01337 9.7e-149 vicX 3.1.26.11 S domain protein
BOONDGFI_01338 1.4e-181 htrA 3.4.21.107 O serine protease
BOONDGFI_01339 4.3e-91 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BOONDGFI_01340 3.7e-51 L hmm pf00665
BOONDGFI_01341 2e-61 L Helix-turn-helix domain
BOONDGFI_01342 1e-159 cjaA ET ABC transporter substrate-binding protein
BOONDGFI_01343 3.7e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BOONDGFI_01344 3.1e-87 P ABC transporter permease
BOONDGFI_01345 1.9e-110 papP P ABC transporter, permease protein
BOONDGFI_01346 6.5e-23 adhR K helix_turn_helix, mercury resistance
BOONDGFI_01347 1.9e-07 S Uncharacterized protein conserved in bacteria (DUF2255)
BOONDGFI_01348 3.7e-108 G Antibiotic biosynthesis monooxygenase
BOONDGFI_01349 2.3e-90 lacA 2.3.1.79 S Maltose acetyltransferase
BOONDGFI_01350 1.8e-68 4.1.1.45 S Amidohydrolase
BOONDGFI_01352 7.2e-65 S Abi-like protein
BOONDGFI_01353 2.4e-62 kptA H Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
BOONDGFI_01354 7.7e-70 fabK 1.3.1.9 S Nitronate monooxygenase
BOONDGFI_01355 2.1e-32
BOONDGFI_01356 8.2e-227 yrvN L AAA C-terminal domain
BOONDGFI_01357 1.3e-138 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
BOONDGFI_01358 2.4e-51
BOONDGFI_01359 2e-22 K Helix-turn-helix XRE-family like proteins
BOONDGFI_01360 9.1e-118 magIII L Base excision DNA repair protein, HhH-GPD family
BOONDGFI_01361 4.6e-45 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
BOONDGFI_01362 2.3e-50 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
BOONDGFI_01365 4.5e-88 mta K helix_turn_helix, mercury resistance
BOONDGFI_01366 6.8e-95 yyaR K Acetyltransferase (GNAT) domain
BOONDGFI_01367 0.0 uvrA3 L excinuclease ABC, A subunit
BOONDGFI_01370 1.5e-104 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
BOONDGFI_01371 2.5e-74 K LytTr DNA-binding domain
BOONDGFI_01372 1.2e-73 S Protein of unknown function (DUF3021)
BOONDGFI_01373 1.5e-104 L Resolvase, N terminal domain
BOONDGFI_01374 3e-256 L Probable transposase
BOONDGFI_01375 1.1e-286 lsa S ABC transporter
BOONDGFI_01376 9.1e-83 KLT serine threonine protein kinase
BOONDGFI_01377 6.7e-21 L COG2826 Transposase and inactivated derivatives, IS30 family
BOONDGFI_01378 1.3e-108 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
BOONDGFI_01379 1.3e-27 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
BOONDGFI_01380 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BOONDGFI_01381 4.2e-33 ykzG S Belongs to the UPF0356 family
BOONDGFI_01382 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BOONDGFI_01383 0.0 typA T GTP-binding protein TypA
BOONDGFI_01384 2e-206 ftsW D Belongs to the SEDS family
BOONDGFI_01385 8.7e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
BOONDGFI_01386 1.5e-95 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
BOONDGFI_01387 2.7e-85 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BOONDGFI_01388 1.1e-192 ylbL T Belongs to the peptidase S16 family
BOONDGFI_01389 7.3e-84 comEA L Competence protein ComEA
BOONDGFI_01390 0.0 comEC S Competence protein ComEC
BOONDGFI_01391 5.9e-172 holA 2.7.7.7 L DNA polymerase III delta subunit
BOONDGFI_01392 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
BOONDGFI_01393 6.6e-53 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
BOONDGFI_01394 9.9e-247 XK27_08635 S UPF0210 protein
BOONDGFI_01395 8.6e-41 gcvR T Belongs to the UPF0237 family
BOONDGFI_01396 2.9e-79 S Uncharacterised protein family (UPF0236)
BOONDGFI_01397 3e-126 M NlpC P60 family protein
BOONDGFI_01398 3.3e-46 S Archaea bacterial proteins of unknown function
BOONDGFI_01399 2e-299 L Putative transposase DNA-binding domain
BOONDGFI_01400 1.4e-116 guaB2 L Resolvase, N terminal domain
BOONDGFI_01401 1.7e-40 S Archaea bacterial proteins of unknown function
BOONDGFI_01402 3.2e-220 L transposase, IS605 OrfB family
BOONDGFI_01403 2.1e-31 S Archaea bacterial proteins of unknown function
BOONDGFI_01404 2.6e-92 M NlpC/P60 family
BOONDGFI_01405 3.6e-94 gmk2 2.7.4.8 F Guanylate kinase homologues.
BOONDGFI_01406 3.9e-26
BOONDGFI_01407 2.9e-271 S O-antigen ligase like membrane protein
BOONDGFI_01408 8.9e-55 yoaK S Protein of unknown function (DUF1275)
BOONDGFI_01409 1.8e-54 K Helix-turn-helix domain
BOONDGFI_01410 5.9e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BOONDGFI_01411 3.6e-163 ppaC 3.6.1.1 C inorganic pyrophosphatase
BOONDGFI_01412 3.2e-170 K Transcriptional regulator
BOONDGFI_01413 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BOONDGFI_01414 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BOONDGFI_01415 4.4e-104 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BOONDGFI_01416 4.8e-175 snf 2.7.11.1 KL domain protein
BOONDGFI_01417 5.8e-85 dps P Belongs to the Dps family
BOONDGFI_01418 2e-94 K acetyltransferase
BOONDGFI_01419 3.1e-33 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
BOONDGFI_01420 4.2e-95 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
BOONDGFI_01421 4.6e-146 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
BOONDGFI_01422 9.8e-55
BOONDGFI_01423 3.7e-284 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BOONDGFI_01424 2.8e-86 K Helix-turn-helix domain, rpiR family
BOONDGFI_01425 8.7e-219 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BOONDGFI_01426 9.5e-138 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
BOONDGFI_01427 2e-51 mgtC S MgtC family
BOONDGFI_01428 4.4e-46 mgtC S MgtC family
BOONDGFI_01429 1.9e-09 5.3.3.2 C FMN-dependent dehydrogenase
BOONDGFI_01430 1.1e-158 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BOONDGFI_01431 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BOONDGFI_01432 9.4e-56 yheA S Belongs to the UPF0342 family
BOONDGFI_01433 1.4e-228 yhaO L Ser Thr phosphatase family protein
BOONDGFI_01434 0.0 L AAA domain
BOONDGFI_01435 4.5e-188 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
BOONDGFI_01436 8.4e-75 S PAS domain
BOONDGFI_01437 4.2e-156 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
BOONDGFI_01438 1.8e-27
BOONDGFI_01439 3.4e-79 hit FG Scavenger mRNA decapping enzyme C-term binding
BOONDGFI_01440 3.8e-54 higA K Helix-turn-helix XRE-family like proteins
BOONDGFI_01441 3.9e-136 ecsA V ABC transporter, ATP-binding protein
BOONDGFI_01442 5.3e-212 ecsB U ABC transporter
BOONDGFI_01443 1e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BOONDGFI_01444 7.3e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
BOONDGFI_01445 3.3e-123 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BOONDGFI_01446 0.0 S SLAP domain
BOONDGFI_01447 4.8e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
BOONDGFI_01448 8.7e-176 S SLAP domain
BOONDGFI_01449 7e-62 M Peptidase family M1 domain
BOONDGFI_01450 3.6e-142 M Peptidase family M1 domain
BOONDGFI_01451 7.9e-39 M Peptidase family M1 domain
BOONDGFI_01452 2.4e-194 S Bacteriocin helveticin-J
BOONDGFI_01453 3.1e-14
BOONDGFI_01454 4.3e-52 L RelB antitoxin
BOONDGFI_01455 4.8e-141 qmcA O prohibitin homologues
BOONDGFI_01456 7.5e-123 darA C Flavodoxin
BOONDGFI_01457 1.2e-310 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
BOONDGFI_01458 1.9e-78 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BOONDGFI_01459 2.9e-218 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BOONDGFI_01460 6.1e-134 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
BOONDGFI_01461 3.8e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BOONDGFI_01462 1.5e-126 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BOONDGFI_01463 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BOONDGFI_01464 1.5e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BOONDGFI_01465 2.3e-198 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
BOONDGFI_01466 1.1e-104 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BOONDGFI_01467 2.9e-290 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
BOONDGFI_01468 4.5e-241 purD 6.3.4.13 F Belongs to the GARS family
BOONDGFI_01469 0.0 cas3 L Type III restriction enzyme, res subunit
BOONDGFI_01470 1.1e-143 cas5d S CRISPR-associated protein (Cas_Cas5)
BOONDGFI_01471 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
BOONDGFI_01472 9.3e-158 csd2 L CRISPR-associated protein Cas7
BOONDGFI_01473 2.8e-125 cas4 3.1.12.1 L Domain of unknown function DUF83
BOONDGFI_01474 3.3e-197 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BOONDGFI_01475 1.4e-28 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BOONDGFI_01476 9e-14
BOONDGFI_01477 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BOONDGFI_01478 1.3e-156 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BOONDGFI_01479 5.5e-104 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BOONDGFI_01480 4.1e-83 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BOONDGFI_01481 2.6e-247 dnaB L Replication initiation and membrane attachment
BOONDGFI_01482 1.5e-166 dnaI L Primosomal protein DnaI
BOONDGFI_01483 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BOONDGFI_01484 6.7e-60 S ACT domain
BOONDGFI_01485 1.2e-182 S Domain of unknown function (DUF389)
BOONDGFI_01486 5.9e-43 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
BOONDGFI_01487 2.2e-193 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
BOONDGFI_01488 2.1e-55 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BOONDGFI_01489 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
BOONDGFI_01490 5.1e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BOONDGFI_01491 3.8e-93 yqeG S HAD phosphatase, family IIIA
BOONDGFI_01492 1.6e-210 yqeH S Ribosome biogenesis GTPase YqeH
BOONDGFI_01493 2e-120 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BOONDGFI_01494 1.9e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
BOONDGFI_01495 6.9e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BOONDGFI_01496 1.2e-213 ylbM S Belongs to the UPF0348 family
BOONDGFI_01497 3e-96 yceD S Uncharacterized ACR, COG1399
BOONDGFI_01498 1.1e-124 K response regulator
BOONDGFI_01499 4.3e-278 arlS 2.7.13.3 T Histidine kinase
BOONDGFI_01500 1.3e-84 S Aminoacyl-tRNA editing domain
BOONDGFI_01501 4.1e-154 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BOONDGFI_01502 9.3e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
BOONDGFI_01503 1.5e-138 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BOONDGFI_01504 1.5e-61 yodB K Transcriptional regulator, HxlR family
BOONDGFI_01505 2.2e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BOONDGFI_01506 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BOONDGFI_01507 1.4e-62 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BOONDGFI_01508 8.7e-170 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
BOONDGFI_01509 5.3e-38 K Helix-turn-helix domain
BOONDGFI_01510 4.7e-174 S ABC transporter
BOONDGFI_01511 1.2e-08 C WbqC-like protein family
BOONDGFI_01512 3.4e-28
BOONDGFI_01513 1.2e-34
BOONDGFI_01514 2.3e-57 3.6.1.55 L NUDIX domain
BOONDGFI_01515 1.1e-169 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
BOONDGFI_01516 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
BOONDGFI_01517 2.2e-12 3.6.4.12 S PD-(D/E)XK nuclease family transposase
BOONDGFI_01518 2.9e-108 3.6.4.12 S PD-(D/E)XK nuclease family transposase
BOONDGFI_01519 3e-107 padC Q Phenolic acid decarboxylase
BOONDGFI_01520 3e-90 padR K Virulence activator alpha C-term
BOONDGFI_01521 1.3e-109 M ErfK YbiS YcfS YnhG
BOONDGFI_01522 3.1e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BOONDGFI_01523 4.8e-238 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BOONDGFI_01525 3.7e-48 pspC KT PspC domain
BOONDGFI_01526 2.4e-95 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
BOONDGFI_01527 5.9e-90 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
BOONDGFI_01528 0.0 O Belongs to the peptidase S8 family
BOONDGFI_01529 0.0 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
BOONDGFI_01530 2.2e-27 V Abi-like protein
BOONDGFI_01532 4.2e-17 S HicB_like antitoxin of bacterial toxin-antitoxin system
BOONDGFI_01534 2.9e-31 V Abi-like protein
BOONDGFI_01535 1.1e-24 V Abi-like protein
BOONDGFI_01536 2.6e-17 lysR7 K LysR substrate binding domain
BOONDGFI_01537 4.7e-54 lysR7 K LysR substrate binding domain
BOONDGFI_01538 7.2e-201 C FAD binding domain
BOONDGFI_01539 1.5e-253 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
BOONDGFI_01540 5.9e-70 S Iron-sulphur cluster biosynthesis
BOONDGFI_01541 3.4e-192 ybiR P Citrate transporter
BOONDGFI_01542 2.5e-95 lemA S LemA family
BOONDGFI_01543 5.6e-161 htpX O Belongs to the peptidase M48B family
BOONDGFI_01544 1.9e-172 K helix_turn_helix, arabinose operon control protein
BOONDGFI_01545 8.2e-249 cbiO1 S ABC transporter, ATP-binding protein
BOONDGFI_01546 1e-95 P Cobalt transport protein
BOONDGFI_01547 1.4e-172 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
BOONDGFI_01548 5e-79 S SLAP domain
BOONDGFI_01549 9.2e-101 S Bacteriocin helveticin-J
BOONDGFI_01550 5e-106 K Helix-turn-helix XRE-family like proteins
BOONDGFI_01552 9.7e-09 repB EP Plasmid replication protein
BOONDGFI_01553 4.9e-14 repB EP Plasmid replication protein
BOONDGFI_01554 1.1e-42 spoVK O RNA helicase
BOONDGFI_01555 3e-14
BOONDGFI_01556 7.2e-156 L Belongs to the 'phage' integrase family
BOONDGFI_01557 6.4e-243 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BOONDGFI_01559 3.9e-30 WQ51_00220 K Helix-turn-helix XRE-family like proteins
BOONDGFI_01560 1.7e-111 ybbL S ABC transporter, ATP-binding protein
BOONDGFI_01561 1.5e-130 ybbM S Uncharacterised protein family (UPF0014)
BOONDGFI_01562 5.1e-39 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
BOONDGFI_01563 4.5e-46 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
BOONDGFI_01564 3.5e-137 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BOONDGFI_01565 3.2e-250 V Restriction endonuclease
BOONDGFI_01566 6e-146 pipD E Dipeptidase
BOONDGFI_01567 1.3e-207 tagO 2.7.8.33, 2.7.8.35 M transferase
BOONDGFI_01568 6.9e-116 yvyE 3.4.13.9 S YigZ family
BOONDGFI_01569 7.3e-247 comFA L Helicase C-terminal domain protein
BOONDGFI_01570 1.9e-132 comFC S Competence protein
BOONDGFI_01571 2.5e-95 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BOONDGFI_01572 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BOONDGFI_01573 1.6e-185 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BOONDGFI_01574 4.4e-24
BOONDGFI_01575 3.2e-178 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BOONDGFI_01576 6e-157 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BOONDGFI_01577 3e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
BOONDGFI_01578 2.1e-39 S Enterocin A Immunity
BOONDGFI_01579 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BOONDGFI_01580 1.2e-73 nrdI F Probably involved in ribonucleotide reductase function
BOONDGFI_01581 4.7e-193 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BOONDGFI_01582 2.2e-82 IQ reductase
BOONDGFI_01583 3.2e-71 metQ_4 P Belongs to the nlpA lipoprotein family
BOONDGFI_01584 1e-157 S Uncharacterised protein family (UPF0236)
BOONDGFI_01585 2.5e-56 S Uncharacterised protein family (UPF0236)
BOONDGFI_01586 4.3e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BOONDGFI_01587 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BOONDGFI_01588 9.2e-167 metF 1.5.1.20 C Methylenetetrahydrofolate reductase
BOONDGFI_01589 3.7e-151 S reductase
BOONDGFI_01590 6.4e-140 yxeH S hydrolase
BOONDGFI_01591 7.8e-16 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BOONDGFI_01592 5.8e-136 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BOONDGFI_01593 7.8e-247 yfnA E Amino Acid
BOONDGFI_01594 7.1e-62 dedA 3.1.3.1 S SNARE associated Golgi protein
BOONDGFI_01595 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BOONDGFI_01596 1.4e-242 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BOONDGFI_01597 0.0 oatA I Acyltransferase
BOONDGFI_01598 6.8e-178 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BOONDGFI_01599 4.1e-99 L Integrase
BOONDGFI_01600 7.2e-47
BOONDGFI_01601 2.8e-84 FG adenosine 5'-monophosphoramidase activity
BOONDGFI_01602 1.2e-57 L Psort location Cytoplasmic, score
BOONDGFI_01603 1.6e-112 L Psort location Cytoplasmic, score
BOONDGFI_01604 5.3e-17
BOONDGFI_01605 4.7e-269 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
BOONDGFI_01606 0.0 traA L MobA MobL family protein
BOONDGFI_01607 9.4e-27
BOONDGFI_01608 4.4e-40
BOONDGFI_01609 8.2e-85
BOONDGFI_01610 3.9e-44 relB L Addiction module antitoxin, RelB DinJ family
BOONDGFI_01611 9.4e-166 repA S Replication initiator protein A
BOONDGFI_01612 2.3e-142 soj D AAA domain
BOONDGFI_01613 4.6e-29
BOONDGFI_01615 2e-25 cobB K SIR2 family
BOONDGFI_01616 3.5e-37 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
BOONDGFI_01617 2.3e-118 terC P Integral membrane protein TerC family
BOONDGFI_01618 4.1e-62 yeaO S Protein of unknown function, DUF488
BOONDGFI_01619 3.6e-122 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
BOONDGFI_01620 5.1e-290 glnP P ABC transporter permease
BOONDGFI_01621 2.2e-134 glnQ E ABC transporter, ATP-binding protein
BOONDGFI_01622 4.6e-157 L HNH nucleases
BOONDGFI_01623 5.9e-120 yfbR S HD containing hydrolase-like enzyme
BOONDGFI_01624 2.5e-150 G Glycosyl hydrolases family 8
BOONDGFI_01625 6.5e-227 ydaM M Glycosyl transferase family group 2
BOONDGFI_01626 6.8e-140
BOONDGFI_01627 1.2e-17
BOONDGFI_01628 2.3e-42 lacZ 3.2.1.23 G -beta-galactosidase
BOONDGFI_01629 3.9e-162 lacZ 3.2.1.23 G -beta-galactosidase
BOONDGFI_01630 0.0 lacS G Transporter
BOONDGFI_01631 1.1e-108 lacS G Transporter
BOONDGFI_01632 1.4e-48 lacS G Transporter
BOONDGFI_01633 2.1e-24 lacS G Transporter
BOONDGFI_01634 1.2e-188 lacR K Transcriptional regulator
BOONDGFI_01635 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
BOONDGFI_01636 1.7e-187 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
BOONDGFI_01637 1.2e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BOONDGFI_01638 3e-44 O Matrixin
BOONDGFI_01640 4.7e-233 clcA P chloride
BOONDGFI_01641 0.0 3.6.3.8 P P-type ATPase
BOONDGFI_01642 1e-186 clcA P chloride
BOONDGFI_01643 3.1e-110 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BOONDGFI_01644 4e-122 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BOONDGFI_01645 1.3e-165 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BOONDGFI_01646 1.3e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BOONDGFI_01647 3e-181 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
BOONDGFI_01648 4e-237 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BOONDGFI_01649 7.3e-208 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
BOONDGFI_01650 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
BOONDGFI_01652 5.8e-27 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
BOONDGFI_01653 1.4e-43
BOONDGFI_01655 6.5e-132 glcU U sugar transport
BOONDGFI_01656 1.4e-46
BOONDGFI_01657 1.8e-77 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
BOONDGFI_01658 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BOONDGFI_01659 2e-58 S Bacterial PH domain
BOONDGFI_01660 4e-27
BOONDGFI_01661 2.3e-65 arsC 1.20.4.1 P Belongs to the ArsC family
BOONDGFI_01662 3.6e-176 I Carboxylesterase family
BOONDGFI_01664 5.5e-204 M Glycosyl hydrolases family 25
BOONDGFI_01665 0.0 S Predicted membrane protein (DUF2207)
BOONDGFI_01666 2.1e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
BOONDGFI_01667 2.8e-125 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
BOONDGFI_01668 4.3e-239 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOONDGFI_01669 5.5e-197 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
BOONDGFI_01670 2e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
BOONDGFI_01671 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
BOONDGFI_01672 1e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
BOONDGFI_01673 7.5e-200 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BOONDGFI_01674 3.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BOONDGFI_01675 1e-67 yqhY S Asp23 family, cell envelope-related function
BOONDGFI_01676 1.4e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BOONDGFI_01677 1.3e-151 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BOONDGFI_01678 1.2e-194 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BOONDGFI_01679 4.9e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BOONDGFI_01680 2.1e-157 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
BOONDGFI_01681 4.7e-151 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
BOONDGFI_01682 2.9e-304 recN L May be involved in recombinational repair of damaged DNA
BOONDGFI_01683 3.8e-78 6.3.3.2 S ASCH
BOONDGFI_01684 2e-109 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
BOONDGFI_01685 9.4e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
BOONDGFI_01686 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BOONDGFI_01687 2.5e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BOONDGFI_01688 3.5e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BOONDGFI_01689 2.3e-145 stp 3.1.3.16 T phosphatase
BOONDGFI_01690 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
BOONDGFI_01691 1.7e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BOONDGFI_01692 1.4e-116 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
BOONDGFI_01693 6.4e-125 thiN 2.7.6.2 H thiamine pyrophosphokinase
BOONDGFI_01694 1.7e-48
BOONDGFI_01695 2.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
BOONDGFI_01696 6.8e-57 asp S Asp23 family, cell envelope-related function
BOONDGFI_01697 2.9e-304 yloV S DAK2 domain fusion protein YloV
BOONDGFI_01698 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BOONDGFI_01699 2.1e-180 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BOONDGFI_01700 1.7e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BOONDGFI_01701 4e-195 oppD P Belongs to the ABC transporter superfamily
BOONDGFI_01702 5.3e-181 oppF P Belongs to the ABC transporter superfamily
BOONDGFI_01703 1.7e-176 oppB P ABC transporter permease
BOONDGFI_01704 8.7e-141 oppC P Binding-protein-dependent transport system inner membrane component
BOONDGFI_01705 0.0 oppA E ABC transporter substrate-binding protein
BOONDGFI_01706 4e-170 L Transposase and inactivated derivatives IS30 family
BOONDGFI_01707 5e-259 gor 1.8.1.7 C Glutathione reductase
BOONDGFI_01708 3.8e-215 tra L Transposase and inactivated derivatives, IS30 family
BOONDGFI_01710 1.2e-12 ytgB S Transglycosylase associated protein
BOONDGFI_01711 3.4e-70 S Phage Mu protein F like protein
BOONDGFI_01712 2.7e-33 S Phage Mu protein F like protein
BOONDGFI_01713 3.2e-101 tnpR L Resolvase, N terminal domain
BOONDGFI_01715 2.4e-154 V ABC transporter transmembrane region
BOONDGFI_01716 1.9e-62 S GIY-YIG catalytic domain
BOONDGFI_01718 5.2e-151 P ABC-type cobalt transport system permease component CbiQ and related transporters
BOONDGFI_01719 0.0 ykoD_2 S AAA domain, putative AbiEii toxin, Type IV TA system
BOONDGFI_01720 1.4e-122 S ECF-type riboflavin transporter, S component
BOONDGFI_01721 9.2e-49 U FFAT motif binding
BOONDGFI_01722 5.2e-82 U FFAT motif binding
BOONDGFI_01723 1.7e-15 NU Mycoplasma protein of unknown function, DUF285
BOONDGFI_01724 1.6e-76 S Domain of unknown function (DUF4430)
BOONDGFI_01725 6.7e-182 U FFAT motif binding
BOONDGFI_01726 0.0 S Domain of unknown function (DUF4430)
BOONDGFI_01727 3.9e-58
BOONDGFI_01728 9.4e-44
BOONDGFI_01729 2.3e-256 pepC 3.4.22.40 E Peptidase C1-like family
BOONDGFI_01730 1.2e-266 P Sodium:sulfate symporter transmembrane region
BOONDGFI_01731 9.9e-154 ydjP I Alpha/beta hydrolase family
BOONDGFI_01732 1.7e-193 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BOONDGFI_01733 9.1e-44 citD C Covalent carrier of the coenzyme of citrate lyase
BOONDGFI_01734 4.1e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
BOONDGFI_01735 4.6e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
BOONDGFI_01736 0.0 FbpA K Fibronectin-binding protein
BOONDGFI_01737 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
BOONDGFI_01738 1.9e-197 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
BOONDGFI_01739 3.6e-155 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BOONDGFI_01740 2.8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BOONDGFI_01741 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
BOONDGFI_01742 0.0 oppA E ABC transporter substrate-binding protein
BOONDGFI_01743 1.3e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BOONDGFI_01744 0.0 smc D Required for chromosome condensation and partitioning
BOONDGFI_01745 2.8e-166 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BOONDGFI_01746 1.9e-288 pipD E Dipeptidase
BOONDGFI_01747 4.9e-49
BOONDGFI_01748 1.9e-132 L hmm pf00665
BOONDGFI_01749 1.3e-88 dam 2.1.1.72 H Site-specific DNA-methyltransferase (adenine-specific)
BOONDGFI_01751 2.2e-116 L Integrase
BOONDGFI_01753 2e-255 gor 1.8.1.7 C Glutathione reductase
BOONDGFI_01754 3.2e-92 K Acetyltransferase (GNAT) family
BOONDGFI_01755 1e-57 S Alpha beta hydrolase
BOONDGFI_01756 5.6e-21 S Hydrolases of the alpha beta superfamily
BOONDGFI_01757 2.1e-39 S Hydrolases of the alpha beta superfamily
BOONDGFI_01758 1.3e-142 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
BOONDGFI_01759 5.2e-30 1.1.1.3 T phosphoserine phosphatase activity
BOONDGFI_01761 6.2e-104 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BOONDGFI_01769 2e-219 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
BOONDGFI_01770 1.3e-201 cpoA GT4 M Glycosyltransferase, group 1 family protein
BOONDGFI_01771 7e-176 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BOONDGFI_01772 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BOONDGFI_01773 2.3e-29 secG U Preprotein translocase
BOONDGFI_01774 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BOONDGFI_01775 1.1e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BOONDGFI_01776 2.7e-92 L transposase activity
BOONDGFI_01777 1.4e-27 S Enterocin A Immunity
BOONDGFI_01778 1.3e-22 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
BOONDGFI_01779 1.4e-125 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
BOONDGFI_01780 8.2e-118 S PAS domain
BOONDGFI_01781 6.3e-137 nirC P Formate/nitrite transporter
BOONDGFI_01782 1e-206 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
BOONDGFI_01783 7.5e-108 pncA Q Isochorismatase family
BOONDGFI_01784 2.2e-268 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BOONDGFI_01785 2.4e-127 3.6.1.13, 3.6.1.55 F NUDIX domain
BOONDGFI_01786 2.1e-72 S Iron-sulphur cluster biosynthesis
BOONDGFI_01787 0.0 uup S ABC transporter, ATP-binding protein
BOONDGFI_01788 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BOONDGFI_01789 5.7e-77 XK27_02470 K LytTr DNA-binding domain
BOONDGFI_01790 2.7e-121 liaI S membrane
BOONDGFI_01791 3.1e-181 scrR K Transcriptional regulator, LacI family
BOONDGFI_01792 2e-229 scrB 3.2.1.26 GH32 G invertase
BOONDGFI_01793 0.0 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
BOONDGFI_01794 1.3e-21
BOONDGFI_01795 2.3e-33 S Domain of unknown function (DUF4393)
BOONDGFI_01796 2.5e-19
BOONDGFI_01799 4.8e-86 V COG4823 Abortive infection bacteriophage resistance protein
BOONDGFI_01800 1.3e-120 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
BOONDGFI_01801 3.4e-102 L reverse transcriptase
BOONDGFI_01803 7.2e-20
BOONDGFI_01804 3.8e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BOONDGFI_01805 1e-96 J Acetyltransferase (GNAT) domain
BOONDGFI_01806 1.8e-107 yjbF S SNARE associated Golgi protein
BOONDGFI_01807 2.7e-151 I alpha/beta hydrolase fold
BOONDGFI_01808 1.2e-123 hipB K Helix-turn-helix
BOONDGFI_01809 2.1e-260 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
BOONDGFI_01810 9.6e-149
BOONDGFI_01811 0.0 ydgH S MMPL family
BOONDGFI_01812 6.2e-97 yobS K Bacterial regulatory proteins, tetR family
BOONDGFI_01813 1.5e-151 3.5.2.6 V Beta-lactamase enzyme family
BOONDGFI_01814 4.1e-159 corA P CorA-like Mg2+ transporter protein
BOONDGFI_01815 1.1e-234 G Bacterial extracellular solute-binding protein
BOONDGFI_01816 7.3e-255 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
BOONDGFI_01817 1.6e-146 gtsC P Binding-protein-dependent transport system inner membrane component
BOONDGFI_01818 9.5e-158 gtsB P ABC-type sugar transport systems, permease components
BOONDGFI_01819 1.9e-200 malK P ATPases associated with a variety of cellular activities
BOONDGFI_01820 1.6e-279 pipD E Dipeptidase
BOONDGFI_01821 1.2e-157 endA F DNA RNA non-specific endonuclease
BOONDGFI_01822 3.1e-162 dnaQ 2.7.7.7 L EXOIII
BOONDGFI_01823 4.5e-157 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BOONDGFI_01824 1.6e-106 yviA S Protein of unknown function (DUF421)
BOONDGFI_01825 2.1e-63 S Protein of unknown function (DUF3290)
BOONDGFI_01826 4.9e-139 pnuC H nicotinamide mononucleotide transporter
BOONDGFI_01827 4.9e-145
BOONDGFI_01828 1.2e-108 S PAS domain
BOONDGFI_01829 2.9e-277 V ABC transporter transmembrane region
BOONDGFI_01830 9.3e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
BOONDGFI_01831 3.3e-186 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BOONDGFI_01832 1.3e-95 F Nucleoside 2-deoxyribosyltransferase
BOONDGFI_01834 1e-51 S Peptidase propeptide and YPEB domain
BOONDGFI_01835 4.3e-247 G Bacterial extracellular solute-binding protein
BOONDGFI_01836 2.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BOONDGFI_01837 2.3e-170 coaA 2.7.1.33 F Pantothenic acid kinase
BOONDGFI_01838 3.9e-104 E GDSL-like Lipase/Acylhydrolase
BOONDGFI_01839 2.2e-78 yjcF S Acetyltransferase (GNAT) domain
BOONDGFI_01840 6.1e-151 aatB ET ABC transporter substrate-binding protein
BOONDGFI_01841 6.9e-110 glnQ 3.6.3.21 E ABC transporter
BOONDGFI_01842 1.2e-109 glnP P ABC transporter permease
BOONDGFI_01843 0.0 helD 3.6.4.12 L DNA helicase
BOONDGFI_01844 9.6e-121 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
BOONDGFI_01845 1.1e-126 pgm3 G Phosphoglycerate mutase family
BOONDGFI_01846 8.3e-18 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
BOONDGFI_01847 1.2e-238 S response to antibiotic
BOONDGFI_01848 9.1e-124
BOONDGFI_01849 5.4e-15
BOONDGFI_01850 2.1e-185 ansA 3.5.1.1 EJ L-asparaginase, type I
BOONDGFI_01851 1.2e-132 glvR K Helix-turn-helix domain, rpiR family
BOONDGFI_01852 1.5e-266 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
BOONDGFI_01853 2.9e-37
BOONDGFI_01854 5.3e-95
BOONDGFI_01855 6.7e-104 3.2.2.20 K acetyltransferase
BOONDGFI_01856 3.5e-113 pbpX2 V Beta-lactamase
BOONDGFI_01857 3e-104 S AAA ATPase domain
BOONDGFI_01858 4.8e-182 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
BOONDGFI_01859 2e-114 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
BOONDGFI_01860 2.4e-164 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BOONDGFI_01861 4.4e-210 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BOONDGFI_01862 1.2e-216 KQ helix_turn_helix, mercury resistance
BOONDGFI_01863 1.9e-24 S SEC-C Motif Domain Protein
BOONDGFI_01866 2.8e-27 L Transposase
BOONDGFI_01867 2.7e-131 cobQ S glutamine amidotransferase
BOONDGFI_01869 8.7e-61 L RelB antitoxin
BOONDGFI_01871 4e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
BOONDGFI_01872 3.7e-266 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BOONDGFI_01873 1e-147 ptp2 3.1.3.48 T Tyrosine phosphatase family
BOONDGFI_01874 2e-177 yvdE K helix_turn _helix lactose operon repressor
BOONDGFI_01875 2.3e-111 ackA 2.7.2.1 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BOONDGFI_01876 2.9e-254 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
BOONDGFI_01878 2.1e-67 3.1.21.3 V Type I restriction modification DNA specificity domain
BOONDGFI_01879 2.1e-91 L Helix-turn-helix domain
BOONDGFI_01880 1.2e-103 L HTH-like domain
BOONDGFI_01881 0.0 uvrA2 L ABC transporter
BOONDGFI_01882 1.5e-163 baeS F Sensor histidine kinase
BOONDGFI_01883 2.7e-33 baeR K helix_turn_helix, Lux Regulon
BOONDGFI_01884 6.8e-32 baeR K helix_turn_helix, Lux Regulon
BOONDGFI_01885 2.9e-187 G Bacterial extracellular solute-binding protein
BOONDGFI_01886 4e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BOONDGFI_01887 3e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BOONDGFI_01888 1.9e-110 sip L Belongs to the 'phage' integrase family
BOONDGFI_01889 8.5e-145 cof S haloacid dehalogenase-like hydrolase
BOONDGFI_01890 2.6e-228 pbuG S permease
BOONDGFI_01891 1.8e-202 S cog cog1373
BOONDGFI_01892 9.9e-132 K helix_turn_helix, mercury resistance
BOONDGFI_01893 2.4e-229 pbuG S permease
BOONDGFI_01894 8.1e-39 S ThiS family
BOONDGFI_01895 2.3e-128 2.7.7.80 H ThiF family
BOONDGFI_01896 7.9e-163 EGP Major facilitator Superfamily
BOONDGFI_01898 5.9e-18
BOONDGFI_01899 1.9e-161 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
BOONDGFI_01900 8.5e-95
BOONDGFI_01901 8.4e-114 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
BOONDGFI_01902 3.5e-105
BOONDGFI_01903 6.1e-35
BOONDGFI_01904 2e-88 S GyrI-like small molecule binding domain
BOONDGFI_01905 4.1e-20 yniG EGP Major facilitator Superfamily
BOONDGFI_01906 9.1e-43 yniG EGP Major Facilitator Superfamily
BOONDGFI_01907 2.1e-82 racA K Domain of unknown function (DUF1836)
BOONDGFI_01908 1.1e-153 yitS S EDD domain protein, DegV family
BOONDGFI_01909 4.2e-90 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
BOONDGFI_01910 2.5e-27 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
BOONDGFI_01911 1.2e-185 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
BOONDGFI_01912 3e-150 noxC 1.5.1.39 C Nitroreductase
BOONDGFI_01913 2.3e-12
BOONDGFI_01915 1.2e-129 ecfA P ABC-type multidrug transport system ATPase component
BOONDGFI_01916 4.6e-121
BOONDGFI_01917 2.6e-26
BOONDGFI_01918 3.5e-36 S Transglycosylase associated protein
BOONDGFI_01919 3e-57 M Glycosyl hydrolases family 25
BOONDGFI_01920 1.2e-27 M Glycosyl hydrolases family 25
BOONDGFI_01921 1.2e-109 XK27_00160 S Domain of unknown function (DUF5052)
BOONDGFI_01922 6.1e-24 adk 2.7.4.3 F topology modulation protein
BOONDGFI_01923 5.3e-67
BOONDGFI_01924 1.7e-88 M domain protein
BOONDGFI_01925 1.1e-07 UW LPXTG-motif cell wall anchor domain protein
BOONDGFI_01926 2.9e-165 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
BOONDGFI_01927 6.2e-36 fhaB M Rib/alpha-like repeat
BOONDGFI_01928 6.1e-123 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BOONDGFI_01929 1.4e-32 yrvD S Lipopolysaccharide assembly protein A domain
BOONDGFI_01930 7.6e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
BOONDGFI_01931 1.4e-300 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
BOONDGFI_01932 2.1e-21 S Protein of unknown function (DUF2929)
BOONDGFI_01933 0.0 dnaE 2.7.7.7 L DNA polymerase
BOONDGFI_01934 6.6e-184 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BOONDGFI_01935 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
BOONDGFI_01936 3.6e-168 cvfB S S1 domain
BOONDGFI_01937 4e-167 xerD D recombinase XerD
BOONDGFI_01938 3e-57 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BOONDGFI_01939 2.5e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BOONDGFI_01940 4.6e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BOONDGFI_01941 1.3e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BOONDGFI_01942 5.1e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BOONDGFI_01943 1.8e-30 yocH M Lysin motif
BOONDGFI_01944 3.5e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
BOONDGFI_01945 9.1e-207 rpsA 1.17.7.4 J Ribosomal protein S1
BOONDGFI_01946 1.4e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
BOONDGFI_01947 3.9e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BOONDGFI_01948 4e-226 S Tetratricopeptide repeat protein
BOONDGFI_01949 6.1e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
BOONDGFI_01950 2.3e-226 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BOONDGFI_01951 1.1e-111 hlyIII S protein, hemolysin III
BOONDGFI_01952 3.2e-147 DegV S Uncharacterised protein, DegV family COG1307
BOONDGFI_01953 9.3e-36 yozE S Belongs to the UPF0346 family
BOONDGFI_01954 1.6e-275 yjcE P Sodium proton antiporter
BOONDGFI_01955 1.9e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BOONDGFI_01956 8.3e-134 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BOONDGFI_01957 3.7e-154 dprA LU DNA protecting protein DprA
BOONDGFI_01958 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BOONDGFI_01959 6.3e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BOONDGFI_01960 6.2e-168 xerC D Phage integrase, N-terminal SAM-like domain
BOONDGFI_01961 6.7e-90 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BOONDGFI_01962 8.5e-233 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BOONDGFI_01963 1.5e-174 lacX 5.1.3.3 G Aldose 1-epimerase
BOONDGFI_01964 6.9e-23
BOONDGFI_01965 1.4e-29 L PFAM IS66 Orf2 family protein
BOONDGFI_01966 1.7e-23 L Transposase and inactivated derivatives
BOONDGFI_01967 1.6e-22 L Transposase IS66 family
BOONDGFI_01968 4.3e-29 L Transposase and inactivated derivatives
BOONDGFI_01969 3.7e-59 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
BOONDGFI_01970 8.1e-151 xerD L Phage integrase, N-terminal SAM-like domain
BOONDGFI_01971 2.1e-64 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BOONDGFI_01972 2.9e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BOONDGFI_01973 1.8e-27 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
BOONDGFI_01974 1.5e-46 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
BOONDGFI_01975 2e-277 E Amino acid permease
BOONDGFI_01976 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
BOONDGFI_01977 1.9e-247 ynbB 4.4.1.1 P aluminum resistance
BOONDGFI_01978 8.6e-58 ktrA P domain protein
BOONDGFI_01979 2.6e-37 ktrA P domain protein
BOONDGFI_01980 6.6e-70 ktrB P Potassium uptake protein
BOONDGFI_01981 2.3e-58
BOONDGFI_01982 2.3e-56
BOONDGFI_01983 2.7e-39 S Fic/DOC family
BOONDGFI_01984 1.1e-55 S Fic/DOC family
BOONDGFI_01985 1.7e-102
BOONDGFI_01986 6.1e-208 EGP Major facilitator Superfamily
BOONDGFI_01987 1.6e-134
BOONDGFI_01988 6e-44
BOONDGFI_01990 9.9e-10 S Helix-turn-helix domain
BOONDGFI_01991 9.6e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
BOONDGFI_01992 7.4e-52 K Helix-turn-helix
BOONDGFI_01993 3.7e-85 K DNA-binding helix-turn-helix protein
BOONDGFI_01994 1.9e-45 S AAA ATPase domain
BOONDGFI_01995 2.4e-108 dam2 2.1.1.72 L DNA methyltransferase
BOONDGFI_01996 2.2e-30
BOONDGFI_01997 3.3e-124
BOONDGFI_01998 2.6e-83
BOONDGFI_01999 1.2e-51 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
BOONDGFI_02000 6.2e-145 2.4.2.3 F Phosphorylase superfamily
BOONDGFI_02001 4.3e-120 XK27_07525 3.6.1.55 F NUDIX domain
BOONDGFI_02003 4.8e-63
BOONDGFI_02004 3.2e-54 S Domain of unknown function (DUF5067)
BOONDGFI_02006 4.7e-36
BOONDGFI_02007 1.1e-239 I Protein of unknown function (DUF2974)
BOONDGFI_02008 3.7e-120 yhiD S MgtC family
BOONDGFI_02010 2.5e-30 yfdE 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BOONDGFI_02011 2.3e-156 yfdE 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BOONDGFI_02012 2.8e-105 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BOONDGFI_02013 1.2e-67 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
BOONDGFI_02015 5.2e-116 ropB K Transcriptional regulator
BOONDGFI_02016 1.9e-207 EGP Major facilitator Superfamily
BOONDGFI_02017 4.4e-08 ropB K Transcriptional regulator
BOONDGFI_02018 4e-27 L An automated process has identified a potential problem with this gene model
BOONDGFI_02019 2.3e-64
BOONDGFI_02020 1e-159 degV S EDD domain protein, DegV family
BOONDGFI_02021 7.6e-205 xerS L Belongs to the 'phage' integrase family
BOONDGFI_02022 2.4e-83 S COG NOG38524 non supervised orthologous group
BOONDGFI_02023 5.8e-35 sagD S YcaO cyclodehydratase, ATP-ad Mg2+-binding
BOONDGFI_02024 2.1e-43 sagC
BOONDGFI_02025 2.2e-18 sagB C nitroreductase
BOONDGFI_02028 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
BOONDGFI_02029 3.9e-136 L PFAM transposase, IS4 family protein
BOONDGFI_02030 0.0
BOONDGFI_02031 0.0 S PglZ domain
BOONDGFI_02033 5.7e-97 LO the current gene model (or a revised gene model) may contain a frame shift
BOONDGFI_02034 0.0 2.1.1.72 V Eco57I restriction-modification methylase
BOONDGFI_02035 4.9e-219 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
BOONDGFI_02036 6e-111 S Domain of unknown function (DUF1788)
BOONDGFI_02037 8.5e-105 S Putative inner membrane protein (DUF1819)
BOONDGFI_02038 1e-236 S Protein of unknown function DUF262
BOONDGFI_02039 1.1e-29
BOONDGFI_02040 1.2e-11
BOONDGFI_02041 1.8e-56 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BOONDGFI_02042 2e-109 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
BOONDGFI_02043 1e-88 dps P Belongs to the Dps family
BOONDGFI_02044 6e-35 copZ C Heavy-metal-associated domain
BOONDGFI_02045 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
BOONDGFI_02046 1.3e-43 mepA V MATE efflux family protein
BOONDGFI_02047 2.9e-24 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
BOONDGFI_02048 1.3e-262 npr 1.11.1.1 C NADH oxidase
BOONDGFI_02049 5.3e-68 S pyridoxamine 5-phosphate
BOONDGFI_02050 1.4e-170 yobV1 K WYL domain
BOONDGFI_02051 2.1e-79 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
BOONDGFI_02052 3.4e-33
BOONDGFI_02053 9.6e-55
BOONDGFI_02054 3.3e-54 4.4.1.5 E lactoylglutathione lyase activity
BOONDGFI_02055 1.4e-65 S ASCH domain
BOONDGFI_02056 2.4e-109 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BOONDGFI_02057 3.1e-80
BOONDGFI_02058 2.2e-306
BOONDGFI_02059 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
BOONDGFI_02060 1.8e-130 treR K UTRA
BOONDGFI_02061 0.0 treB G phosphotransferase system
BOONDGFI_02062 2e-76
BOONDGFI_02063 3.3e-89
BOONDGFI_02065 2.9e-144 mrr L restriction endonuclease
BOONDGFI_02067 3.5e-219 S SLAP domain
BOONDGFI_02068 7.4e-37 2.1.1.113, 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
BOONDGFI_02069 3.4e-17
BOONDGFI_02070 1.3e-131
BOONDGFI_02071 1.1e-132 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BOONDGFI_02072 4.3e-109 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BOONDGFI_02073 3.3e-50 pbpX2 V Beta-lactamase
BOONDGFI_02074 2.2e-162 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
BOONDGFI_02075 3.4e-28 S zinc-ribbon domain
BOONDGFI_02077 4.1e-71 S Iron-sulphur cluster biosynthesis
BOONDGFI_02078 7.1e-32
BOONDGFI_02079 1.3e-66
BOONDGFI_02080 8.1e-157 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
BOONDGFI_02081 7e-89 XK27_09675 K Acetyltransferase (GNAT) domain
BOONDGFI_02082 5.2e-53 S Protein of unknown function (DUF3021)
BOONDGFI_02083 6e-76 K LytTr DNA-binding domain
BOONDGFI_02084 7.2e-43
BOONDGFI_02085 5.3e-31 S Uncharacterised protein family (UPF0236)
BOONDGFI_02086 2.6e-291 K Putative DNA-binding domain
BOONDGFI_02087 6.1e-109 S Uncharacterised protein family (UPF0236)
BOONDGFI_02088 9.3e-139 yxeH S hydrolase
BOONDGFI_02089 1.6e-10 S Enterocin A Immunity
BOONDGFI_02090 2.9e-108 K Transcriptional regulator, LysR family
BOONDGFI_02091 3.9e-100 K LysR substrate binding domain
BOONDGFI_02092 2e-41 K LysR substrate binding domain
BOONDGFI_02094 0.0 pepO 3.4.24.71 O Peptidase family M13
BOONDGFI_02095 4.8e-224 yttB EGP Major facilitator Superfamily
BOONDGFI_02096 3e-231 XK27_04775 S PAS domain
BOONDGFI_02097 1.6e-100 S Iron-sulfur cluster assembly protein
BOONDGFI_02098 4.3e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BOONDGFI_02099 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
BOONDGFI_02101 4.7e-254 yxbA 6.3.1.12 S ATP-grasp enzyme
BOONDGFI_02102 0.0 asnB 6.3.5.4 E Asparagine synthase
BOONDGFI_02103 3.4e-274 S Calcineurin-like phosphoesterase
BOONDGFI_02104 9.6e-83
BOONDGFI_02105 3.5e-58 tag 3.2.2.20 L glycosylase
BOONDGFI_02106 4.6e-146 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
BOONDGFI_02107 1.4e-126 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
BOONDGFI_02108 7.7e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BOONDGFI_02109 3.2e-151 phnD P Phosphonate ABC transporter
BOONDGFI_02111 4.7e-85 uspA T universal stress protein
BOONDGFI_02112 1.4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
BOONDGFI_02113 3.3e-86 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
BOONDGFI_02114 5.7e-80 ntd 2.4.2.6 F Nucleoside
BOONDGFI_02115 0.0 G Belongs to the glycosyl hydrolase 31 family
BOONDGFI_02116 1.3e-31
BOONDGFI_02117 1.5e-157 I alpha/beta hydrolase fold
BOONDGFI_02118 2.2e-129 yibF S overlaps another CDS with the same product name
BOONDGFI_02119 5.9e-200 yibE S overlaps another CDS with the same product name
BOONDGFI_02120 2.2e-94
BOONDGFI_02121 5.3e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
BOONDGFI_02122 3.9e-229 S Cysteine-rich secretory protein family
BOONDGFI_02123 8.1e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BOONDGFI_02124 4.6e-261 glnPH2 P ABC transporter permease
BOONDGFI_02125 9.7e-128
BOONDGFI_02126 2.5e-121 luxT K Bacterial regulatory proteins, tetR family
BOONDGFI_02127 5.3e-181 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BOONDGFI_02128 2.8e-54
BOONDGFI_02129 9.6e-115 GM NmrA-like family
BOONDGFI_02130 2.5e-126 S Alpha/beta hydrolase family
BOONDGFI_02131 3.6e-159 epsV 2.7.8.12 S glycosyl transferase family 2
BOONDGFI_02132 7.7e-137 ypuA S Protein of unknown function (DUF1002)
BOONDGFI_02133 4e-144 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BOONDGFI_02134 2.8e-176 S Alpha/beta hydrolase of unknown function (DUF915)
BOONDGFI_02135 1.2e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BOONDGFI_02136 5.9e-85
BOONDGFI_02137 1.1e-65 cobB K SIR2 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)