ORF_ID e_value Gene_name EC_number CAZy COGs Description
GEMPKEFO_00001 4.8e-32 P Heavy-metal-associated domain
GEMPKEFO_00002 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
GEMPKEFO_00004 7e-70 L Integrase core domain
GEMPKEFO_00005 2.6e-129 EGP Major Facilitator Superfamily
GEMPKEFO_00006 8.2e-99 EGP Major Facilitator Superfamily
GEMPKEFO_00007 1.7e-72 K Transcriptional regulator, LysR family
GEMPKEFO_00008 3.6e-138 G Xylose isomerase-like TIM barrel
GEMPKEFO_00009 4.6e-117 IQ Enoyl-(Acyl carrier protein) reductase
GEMPKEFO_00010 4.7e-217 1.3.5.4 C FAD binding domain
GEMPKEFO_00011 1.4e-137 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GEMPKEFO_00012 2.9e-70 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
GEMPKEFO_00013 1.4e-142 xerS L Phage integrase family
GEMPKEFO_00014 2e-10
GEMPKEFO_00015 1.8e-36
GEMPKEFO_00017 3.7e-14 S YjcQ protein
GEMPKEFO_00020 2.1e-105 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GEMPKEFO_00021 1.3e-71 ptp3 3.1.3.48 T Tyrosine phosphatase family
GEMPKEFO_00022 4.4e-77 desR K helix_turn_helix, Lux Regulon
GEMPKEFO_00023 1.9e-57 salK 2.7.13.3 T Histidine kinase
GEMPKEFO_00024 1.6e-52 yvfS V ABC-2 type transporter
GEMPKEFO_00025 1.2e-80 yvfR V ABC transporter
GEMPKEFO_00026 1.2e-99 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GEMPKEFO_00027 2.9e-79 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GEMPKEFO_00028 1.9e-29
GEMPKEFO_00029 1.4e-60 sip L Belongs to the 'phage' integrase family
GEMPKEFO_00030 5e-07
GEMPKEFO_00033 1.5e-29 M CHAP domain
GEMPKEFO_00035 3.8e-191 U type IV secretory pathway VirB4
GEMPKEFO_00036 3.5e-27
GEMPKEFO_00038 3.4e-77
GEMPKEFO_00039 2e-220 U TraM recognition site of TraD and TraG
GEMPKEFO_00043 2.9e-148 clpB O Belongs to the ClpA ClpB family
GEMPKEFO_00046 3.2e-165 topA2 5.99.1.2 G Topoisomerase IA
GEMPKEFO_00047 6.1e-43 L Protein of unknown function (DUF3991)
GEMPKEFO_00048 4.5e-69
GEMPKEFO_00051 4.9e-89 pac DM Glucan-binding protein C
GEMPKEFO_00052 5.1e-08 XK27_10540 S ParE toxin of type II toxin-antitoxin system, parDE
GEMPKEFO_00053 4.5e-09 D Antitoxin Phd_YefM, type II toxin-antitoxin system
GEMPKEFO_00056 2.7e-07 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
GEMPKEFO_00057 1.1e-81
GEMPKEFO_00058 5e-257 U COG3505 Type IV secretory pathway, VirD4 components
GEMPKEFO_00059 4.1e-11
GEMPKEFO_00062 3.1e-193 clpB O Belongs to the ClpA ClpB family
GEMPKEFO_00064 1.1e-202 traI 5.99.1.2 L C-terminal repeat of topoisomerase
GEMPKEFO_00066 3.2e-73
GEMPKEFO_00071 5.9e-141 ruvB 3.6.4.12 L four-way junction helicase activity
GEMPKEFO_00072 5.1e-16
GEMPKEFO_00074 1.6e-20 ada 3.2.2.21 F DNA/RNA non-specific endonuclease
GEMPKEFO_00086 9.3e-16
GEMPKEFO_00088 1.1e-13
GEMPKEFO_00089 2.9e-61 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GEMPKEFO_00093 1.8e-26
GEMPKEFO_00095 2.6e-16 S RelB antitoxin
GEMPKEFO_00101 1.9e-08 2.3.1.19 K Cro/C1-type HTH DNA-binding domain
GEMPKEFO_00106 3.2e-40
GEMPKEFO_00107 5.7e-07 L Integrase core domain
GEMPKEFO_00109 2.8e-12 S Thioredoxin
GEMPKEFO_00111 2.7e-117 K Primase C terminal 1 (PriCT-1)
GEMPKEFO_00112 3.2e-11 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GEMPKEFO_00113 2.5e-22 fhaB M Rib/alpha-like repeat
GEMPKEFO_00114 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GEMPKEFO_00115 6.8e-26 ykuJ S Protein of unknown function (DUF1797)
GEMPKEFO_00116 5.2e-131 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GEMPKEFO_00117 1.3e-126 cpoA GT4 M Glycosyltransferase, group 1 family protein
GEMPKEFO_00118 2e-161 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
GEMPKEFO_00119 6.9e-285 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GEMPKEFO_00120 9.7e-37 ptsH G phosphocarrier protein HPR
GEMPKEFO_00121 1.5e-15
GEMPKEFO_00122 0.0 clpE O Belongs to the ClpA ClpB family
GEMPKEFO_00123 1.5e-22 XK27_09445 S Domain of unknown function (DUF1827)
GEMPKEFO_00124 1.7e-105 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
GEMPKEFO_00125 3e-311 rafA 3.2.1.22 G alpha-galactosidase
GEMPKEFO_00126 1.2e-200 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GEMPKEFO_00127 8.6e-163 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GEMPKEFO_00128 4.5e-179 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GEMPKEFO_00129 5.9e-111 galR K Transcriptional regulator
GEMPKEFO_00130 7.5e-288 lacS G Transporter
GEMPKEFO_00131 0.0 lacL 3.2.1.23 G -beta-galactosidase
GEMPKEFO_00132 1.5e-278 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GEMPKEFO_00133 1.8e-108 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
GEMPKEFO_00134 3.2e-157 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GEMPKEFO_00135 6.9e-92 yueF S AI-2E family transporter
GEMPKEFO_00136 2.6e-97 ygaC J Belongs to the UPF0374 family
GEMPKEFO_00137 8.5e-193 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GEMPKEFO_00138 2.3e-16
GEMPKEFO_00139 3.7e-09 arpU S Phage transcriptional regulator, ArpU family
GEMPKEFO_00140 1.5e-37 ybl78 L Conserved phage C-terminus (Phg_2220_C)
GEMPKEFO_00142 5.7e-20
GEMPKEFO_00147 6.2e-45 S Phage regulatory protein Rha (Phage_pRha)
GEMPKEFO_00148 1.5e-07 K Helix-turn-helix XRE-family like proteins
GEMPKEFO_00149 2.1e-15 K Transcriptional regulator, Cro CI family
GEMPKEFO_00150 1e-119 sip L Belongs to the 'phage' integrase family
GEMPKEFO_00151 6.9e-70 recX 2.4.1.337 GT4 S Regulatory protein RecX
GEMPKEFO_00152 8.1e-20 sigH K DNA-templated transcription, initiation
GEMPKEFO_00153 2e-22 S Cytochrome B5
GEMPKEFO_00154 2.9e-48 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain (presumed)
GEMPKEFO_00155 7.6e-60
GEMPKEFO_00156 1.8e-42 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GEMPKEFO_00157 2.9e-156 nrnB S DHHA1 domain
GEMPKEFO_00158 2.5e-91 yunF F Protein of unknown function DUF72
GEMPKEFO_00159 3.4e-48 ndoA L Toxic component of a toxin-antitoxin (TA) module
GEMPKEFO_00160 5.4e-13
GEMPKEFO_00161 4.8e-146 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GEMPKEFO_00162 1.6e-30 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GEMPKEFO_00163 4.6e-15 fhaB M Membrane
GEMPKEFO_00164 2.5e-39
GEMPKEFO_00166 1.1e-15
GEMPKEFO_00167 1e-111 rssA S Phospholipase, patatin family
GEMPKEFO_00168 4.4e-136 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GEMPKEFO_00169 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GEMPKEFO_00170 5.6e-45 S VIT family
GEMPKEFO_00171 1.2e-239 sufB O assembly protein SufB
GEMPKEFO_00172 1.4e-40 nifU C SUF system FeS assembly protein, NifU family
GEMPKEFO_00173 1.8e-146 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GEMPKEFO_00174 4.6e-145 sufD O FeS assembly protein SufD
GEMPKEFO_00175 3.1e-115 sufC O FeS assembly ATPase SufC
GEMPKEFO_00176 2e-225 E ABC transporter, substratebinding protein
GEMPKEFO_00177 8.5e-138 yfeO P Voltage gated chloride channel
GEMPKEFO_00178 3.2e-27 K Helix-turn-helix XRE-family like proteins
GEMPKEFO_00179 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
GEMPKEFO_00180 6.6e-54
GEMPKEFO_00182 3.8e-50 3.1.21.3 V Type I restriction modification DNA specificity domain
GEMPKEFO_00183 3.2e-43 3.1.21.3 V type i restriction
GEMPKEFO_00184 9.7e-127 xerC L Belongs to the 'phage' integrase family
GEMPKEFO_00185 1e-50 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
GEMPKEFO_00186 4.1e-249 2.1.1.72 V type I restriction-modification system
GEMPKEFO_00187 1.2e-56 hsdM 2.1.1.72 V HsdM N-terminal domain
GEMPKEFO_00188 2.9e-22 3.1.21.3 V Type I restriction modification DNA specificity domain
GEMPKEFO_00189 2.5e-136 pfoS S Phosphotransferase system, EIIC
GEMPKEFO_00190 9.3e-117 ldhA 1.1.1.28 CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GEMPKEFO_00191 1.3e-64 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
GEMPKEFO_00192 2.4e-36 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GEMPKEFO_00193 1.2e-135 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
GEMPKEFO_00194 4.8e-83 srlA G PTS system enzyme II sorbitol-specific factor
GEMPKEFO_00195 4.5e-43 gutM K Glucitol operon activator protein (GutM)
GEMPKEFO_00196 2.2e-103 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
GEMPKEFO_00197 4e-110 IQ NAD dependent epimerase/dehydratase family
GEMPKEFO_00198 1.6e-49 M Phage tail tape measure protein TP901
GEMPKEFO_00201 6e-32 S Phage minor capsid protein 2
GEMPKEFO_00202 2.3e-98 fabK 1.3.1.9 S Nitronate monooxygenase
GEMPKEFO_00203 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GEMPKEFO_00204 2e-80 yitS S EDD domain protein, DegV family
GEMPKEFO_00205 5.6e-57 racA K Domain of unknown function (DUF1836)
GEMPKEFO_00206 5.2e-115 queH 1.17.99.6, 3.1.26.4 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GEMPKEFO_00207 4.3e-147 ald 1.4.1.1 C Belongs to the AlaDH PNT family
GEMPKEFO_00208 3.6e-167 potE2 E amino acid
GEMPKEFO_00211 3.5e-19
GEMPKEFO_00212 2.7e-94 pstS P T5orf172
GEMPKEFO_00213 1.4e-257 yeeB L DEAD-like helicases superfamily
GEMPKEFO_00214 4.3e-236 yeeA V Type II restriction enzyme, methylase subunits
GEMPKEFO_00215 3e-57 yeeA V Type II restriction enzyme, methylase subunits
GEMPKEFO_00216 7.9e-66
GEMPKEFO_00217 1.5e-62
GEMPKEFO_00218 3.2e-161 L T/G mismatch-specific endonuclease activity
GEMPKEFO_00220 6e-61 hsdM 2.1.1.72 V HsdM N-terminal domain
GEMPKEFO_00221 1.3e-22 3.1.21.3 V Type I restriction modification DNA specificity domain
GEMPKEFO_00222 2.4e-106 L Belongs to the 'phage' integrase family
GEMPKEFO_00224 1.2e-191 XK27_11280 S Psort location CytoplasmicMembrane, score
GEMPKEFO_00226 1.3e-108 rhaD 4.1.2.17, 4.1.2.19 H Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
GEMPKEFO_00227 4.8e-219 rhaA 2.7.1.5, 5.3.1.14 G L-rhamnose isomerase (RhaA)
GEMPKEFO_00228 4e-40 rhaM 5.1.3.32 G Involved in the anomeric conversion of L-rhamnose
GEMPKEFO_00229 2.6e-216 rhaB 2.7.1.5, 5.3.1.14 F Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
GEMPKEFO_00230 1.5e-188 iolF EGP Major facilitator Superfamily
GEMPKEFO_00231 3.1e-75 rhaR K helix_turn_helix, arabinose operon control protein
GEMPKEFO_00232 4.9e-50 S Membrane
GEMPKEFO_00233 1.3e-180 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
GEMPKEFO_00234 4.7e-54 S COG NOG19168 non supervised orthologous group
GEMPKEFO_00236 5.1e-104 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
GEMPKEFO_00238 1.2e-216 pts36C G PTS system sugar-specific permease component
GEMPKEFO_00239 6.9e-42 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
GEMPKEFO_00240 1.1e-46 pts36A 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GEMPKEFO_00241 1.1e-69 K DeoR C terminal sensor domain
GEMPKEFO_00242 6.1e-125 yvgN C Aldo keto reductase
GEMPKEFO_00244 2.2e-266 fbp 3.1.3.11 G phosphatase activity
GEMPKEFO_00245 1.4e-70 xerD L Phage integrase, N-terminal SAM-like domain
GEMPKEFO_00251 1.9e-56 K LytTr DNA-binding domain
GEMPKEFO_00252 7.5e-58 2.7.13.3 T GHKL domain
GEMPKEFO_00255 1.9e-13
GEMPKEFO_00256 7.2e-08
GEMPKEFO_00259 5.9e-187 mtnE 2.6.1.83 E Aminotransferase
GEMPKEFO_00260 7.7e-82 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
GEMPKEFO_00261 1.3e-66 S Protein of unknown function (DUF1440)
GEMPKEFO_00262 7.7e-41 S Iron-sulfur cluster assembly protein
GEMPKEFO_00263 4.7e-112 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GEMPKEFO_00264 1.6e-72 sdaAB 4.3.1.17 E Serine dehydratase beta chain
GEMPKEFO_00265 7.8e-208 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GEMPKEFO_00266 7.9e-155 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GEMPKEFO_00267 6.1e-65 G Xylose isomerase domain protein TIM barrel
GEMPKEFO_00268 1.1e-53 ndk 2.7.4.6 F Belongs to the NDK family
GEMPKEFO_00269 6.5e-90 nanK GK ROK family
GEMPKEFO_00270 1.3e-127 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
GEMPKEFO_00271 3.3e-92 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GEMPKEFO_00272 4.3e-75 K Helix-turn-helix domain, rpiR family
GEMPKEFO_00273 1.5e-56 yphA GM NAD dependent epimerase/dehydratase family
GEMPKEFO_00274 7e-217 yjeM E Amino Acid
GEMPKEFO_00276 1.9e-25 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GEMPKEFO_00277 2e-232 tetP J elongation factor G
GEMPKEFO_00278 2.1e-277 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GEMPKEFO_00279 6e-88 tal 2.2.1.2 F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GEMPKEFO_00280 1.1e-166 gutB 1.1.1.1, 1.1.1.14 E Dehydrogenase
GEMPKEFO_00281 1.2e-119 gatD 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
GEMPKEFO_00282 8.1e-182 gatC G PTS system sugar-specific permease component
GEMPKEFO_00283 2e-35 2.7.1.194, 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
GEMPKEFO_00284 2.7e-39 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GEMPKEFO_00286 6.3e-219 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
GEMPKEFO_00287 2.1e-47 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GEMPKEFO_00288 9.5e-68 coiA 3.6.4.12 S Competence protein
GEMPKEFO_00289 2.5e-232 pepF E oligoendopeptidase F
GEMPKEFO_00290 1.3e-41 yjbH Q Thioredoxin
GEMPKEFO_00291 1.1e-97 pstS P Phosphate
GEMPKEFO_00292 4.1e-119 pstC P probably responsible for the translocation of the substrate across the membrane
GEMPKEFO_00293 5.1e-122 pstA P Phosphate transport system permease protein PstA
GEMPKEFO_00294 1e-113 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GEMPKEFO_00295 6.1e-116 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GEMPKEFO_00296 2.7e-56 P Plays a role in the regulation of phosphate uptake
GEMPKEFO_00297 5.2e-148 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GEMPKEFO_00298 1.1e-79 S VIT family
GEMPKEFO_00299 9.4e-84 S membrane
GEMPKEFO_00300 1.6e-40 M1-874 K Domain of unknown function (DUF1836)
GEMPKEFO_00301 2.3e-65 hly S protein, hemolysin III
GEMPKEFO_00302 6.9e-35 K helix_turn_helix, Arsenical Resistance Operon Repressor
GEMPKEFO_00303 4.5e-75 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GEMPKEFO_00306 3e-14
GEMPKEFO_00307 7.8e-173 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GEMPKEFO_00308 3.4e-159 ccpA K catabolite control protein A
GEMPKEFO_00309 3.7e-42 S VanZ like family
GEMPKEFO_00310 1.5e-119 yebC K Transcriptional regulatory protein
GEMPKEFO_00311 1.8e-101 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GEMPKEFO_00312 1.1e-120 comGA NU Type II IV secretion system protein
GEMPKEFO_00313 1.3e-97 comGB NU type II secretion system
GEMPKEFO_00314 3.6e-27 comGC U competence protein ComGC
GEMPKEFO_00315 1.1e-13
GEMPKEFO_00317 9.4e-11 S Putative Competence protein ComGF
GEMPKEFO_00319 5.8e-98 ytxK 2.1.1.72 L N-6 DNA Methylase
GEMPKEFO_00320 9.3e-184 cycA E Amino acid permease
GEMPKEFO_00321 3e-57 S Calcineurin-like phosphoesterase
GEMPKEFO_00322 1.9e-53 yutD S Protein of unknown function (DUF1027)
GEMPKEFO_00323 2.9e-113 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GEMPKEFO_00324 6e-32 S Protein of unknown function (DUF1461)
GEMPKEFO_00325 3e-92 dedA S SNARE associated Golgi protein
GEMPKEFO_00326 3.8e-97 trxB2 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
GEMPKEFO_00327 8.8e-50 yugI 5.3.1.9 J general stress protein
GEMPKEFO_00329 7.8e-87 S Fic/DOC family
GEMPKEFO_00330 6.3e-65 L ISXO2-like transposase domain
GEMPKEFO_00332 3.7e-162 3.1.21.3 L N-6 DNA Methylase
GEMPKEFO_00334 1.5e-10 3.4.21.88 K Peptidase S24-like
GEMPKEFO_00336 1.8e-16 3.4.21.88 K Peptidase S24-like
GEMPKEFO_00343 5.8e-21 S Replication initiator protein A (RepA) N-terminus
GEMPKEFO_00348 6.1e-07
GEMPKEFO_00351 7.5e-20
GEMPKEFO_00352 3.8e-12 polC 2.7.7.7 L BRCA1 C Terminus (BRCT) domain
GEMPKEFO_00356 2.1e-62 ruvB 3.6.4.12 L four-way junction helicase activity
GEMPKEFO_00358 7.9e-11
GEMPKEFO_00359 2.6e-76 S Fic/DOC family
GEMPKEFO_00360 7.5e-239 bcgIB 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
GEMPKEFO_00362 8.6e-25 D nuclear chromosome segregation
GEMPKEFO_00363 5.7e-08
GEMPKEFO_00364 2.4e-106 L Belongs to the 'phage' integrase family
GEMPKEFO_00365 4e-118 S Uncharacterised protein family (UPF0236)
GEMPKEFO_00368 3.3e-60 M Peptidase family M23
GEMPKEFO_00370 3.8e-239 trsE S COG0433 Predicted ATPase
GEMPKEFO_00371 4.3e-40
GEMPKEFO_00372 6.6e-08 S Uncharacterized protein pXO2-11
GEMPKEFO_00374 5.6e-133 NU StbA protein
GEMPKEFO_00375 1.7e-87 endA F DNA RNA non-specific endonuclease
GEMPKEFO_00376 1.1e-21 ssb L Single-stranded DNA-binding protein
GEMPKEFO_00388 4.4e-46 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GEMPKEFO_00389 5.6e-13 S RloB-like protein
GEMPKEFO_00390 2e-57 S AAA domain, putative AbiEii toxin, Type IV TA system
GEMPKEFO_00391 2.3e-25 L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GEMPKEFO_00394 1.4e-44 3.4.22.70 M Sortase family
GEMPKEFO_00395 1.2e-87 M Gram-positive pilin backbone subunit 2, Cna-B-like domain
GEMPKEFO_00396 2.1e-27 3.4.22.70 M Sortase family
GEMPKEFO_00397 3.1e-06 M domain protein
GEMPKEFO_00398 5e-23 S by MetaGeneAnnotator
GEMPKEFO_00402 4.2e-145 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GEMPKEFO_00403 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GEMPKEFO_00404 4.3e-278 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GEMPKEFO_00405 7.1e-161 camS S sex pheromone
GEMPKEFO_00406 7.6e-38 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GEMPKEFO_00407 1.1e-233 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GEMPKEFO_00408 4.3e-256 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GEMPKEFO_00409 3.4e-146 yegS 2.7.1.107 G Lipid kinase
GEMPKEFO_00410 1.5e-210 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GEMPKEFO_00411 1.3e-119 L Mrr N-terminal domain
GEMPKEFO_00412 8.1e-17
GEMPKEFO_00414 7.7e-72 S Beta-lactamase superfamily domain
GEMPKEFO_00415 7.9e-50 K Cro/C1-type HTH DNA-binding domain
GEMPKEFO_00416 8.8e-17 aguA_2 3.5.3.12 E Belongs to the agmatine deiminase family
GEMPKEFO_00417 1.7e-97
GEMPKEFO_00418 7.1e-43
GEMPKEFO_00419 1e-173 spoVK O PFAM ATPase family associated with various cellular activities (AAA)
GEMPKEFO_00420 7.9e-50 K Cro/C1-type HTH DNA-binding domain
GEMPKEFO_00421 4.5e-15 Z012_01675 S X-Pro dipeptidyl-peptidase (S15 family)
GEMPKEFO_00422 9.4e-34 yjaB_1 K Acetyltransferase (GNAT) domain
GEMPKEFO_00432 2.1e-07
GEMPKEFO_00442 7.4e-177 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GEMPKEFO_00443 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GEMPKEFO_00444 2.4e-192 cycA E Amino acid permease
GEMPKEFO_00445 8.3e-187 ytgP S Polysaccharide biosynthesis protein
GEMPKEFO_00446 5.7e-63 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GEMPKEFO_00447 5.4e-81 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GEMPKEFO_00448 6.6e-193 pepV 3.5.1.18 E dipeptidase PepV
GEMPKEFO_00449 2.1e-215 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
GEMPKEFO_00451 1.2e-84 V AAA domain (dynein-related subfamily)
GEMPKEFO_00452 5.8e-68 S LlaJI restriction endonuclease
GEMPKEFO_00455 1.5e-35
GEMPKEFO_00456 2.6e-66 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
GEMPKEFO_00457 4.2e-61 marR K Transcriptional regulator, MarR family
GEMPKEFO_00458 2.4e-101 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GEMPKEFO_00459 2.2e-27 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GEMPKEFO_00460 2.5e-103 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
GEMPKEFO_00461 1.1e-98 IQ reductase
GEMPKEFO_00462 2.1e-195 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GEMPKEFO_00463 4.6e-47 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GEMPKEFO_00464 3.9e-64 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
GEMPKEFO_00465 4.2e-216 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
GEMPKEFO_00466 1.4e-124 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GEMPKEFO_00467 2.3e-102 accA 2.1.3.15, 6.4.1.2 I alpha subunit
GEMPKEFO_00468 9.3e-109 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
GEMPKEFO_00469 5.1e-231 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GEMPKEFO_00470 3.1e-240 pgi 5.3.1.9 G Belongs to the GPI family
GEMPKEFO_00471 5.5e-303 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GEMPKEFO_00472 5.7e-119 gla U Major intrinsic protein
GEMPKEFO_00473 1.5e-45 ykuL S CBS domain
GEMPKEFO_00474 8.8e-61 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GEMPKEFO_00475 1.4e-177 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GEMPKEFO_00476 9e-87 ykuT M mechanosensitive ion channel
GEMPKEFO_00478 1e-285 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GEMPKEFO_00479 2e-21 yheA S Belongs to the UPF0342 family
GEMPKEFO_00480 5e-128 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
GEMPKEFO_00481 2.5e-113 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GEMPKEFO_00483 5.4e-53 hit FG histidine triad
GEMPKEFO_00484 9.8e-95 ecsA V ABC transporter, ATP-binding protein
GEMPKEFO_00485 1.9e-71 ecsB U ABC transporter
GEMPKEFO_00486 1.6e-98 ytmP 2.7.1.89 M Choline/ethanolamine kinase
GEMPKEFO_00487 7.9e-101 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GEMPKEFO_00488 4e-45 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GEMPKEFO_00489 8.1e-77 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GEMPKEFO_00490 1.4e-240 sftA D Belongs to the FtsK SpoIIIE SftA family
GEMPKEFO_00491 7.6e-223 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GEMPKEFO_00492 2.5e-61 phaJ I N-terminal half of MaoC dehydratase
GEMPKEFO_00493 5.2e-69 ybhL S Belongs to the BI1 family
GEMPKEFO_00494 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GEMPKEFO_00495 1.5e-107 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GEMPKEFO_00496 3.5e-50 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GEMPKEFO_00497 6.1e-66 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GEMPKEFO_00498 1.6e-79 dnaB L replication initiation and membrane attachment
GEMPKEFO_00499 1.3e-107 dnaI L Primosomal protein DnaI
GEMPKEFO_00500 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GEMPKEFO_00501 1.3e-79 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GEMPKEFO_00502 1.4e-24 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GEMPKEFO_00503 7.7e-53 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GEMPKEFO_00504 1.6e-70 yqeG S HAD phosphatase, family IIIA
GEMPKEFO_00505 4.6e-181 yqeH S Ribosome biogenesis GTPase YqeH
GEMPKEFO_00506 6e-30 yhbY J RNA-binding protein
GEMPKEFO_00507 3.5e-77 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GEMPKEFO_00508 2.6e-69 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
GEMPKEFO_00509 1.5e-48 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GEMPKEFO_00510 6.5e-83 H Nodulation protein S (NodS)
GEMPKEFO_00511 4.5e-123 ylbM S Belongs to the UPF0348 family
GEMPKEFO_00512 2.3e-56 yceD S Uncharacterized ACR, COG1399
GEMPKEFO_00513 1.9e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GEMPKEFO_00514 4e-89 plsC 2.3.1.51 I Acyltransferase
GEMPKEFO_00515 8.5e-94 yabB 2.1.1.223 L Methyltransferase small domain
GEMPKEFO_00516 1.5e-27 yazA L GIY-YIG catalytic domain protein
GEMPKEFO_00517 1.9e-128 rpsB J Belongs to the universal ribosomal protein uS2 family
GEMPKEFO_00518 2.7e-128 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GEMPKEFO_00519 6.9e-37
GEMPKEFO_00520 3.4e-92 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GEMPKEFO_00521 4.1e-57 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GEMPKEFO_00522 3.8e-159 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GEMPKEFO_00523 7.1e-226 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GEMPKEFO_00524 1.7e-107 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GEMPKEFO_00526 3.1e-111 K response regulator
GEMPKEFO_00527 1.3e-167 arlS 2.7.13.3 T Histidine kinase
GEMPKEFO_00528 1.6e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GEMPKEFO_00529 9.7e-24 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GEMPKEFO_00530 1.8e-135 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
GEMPKEFO_00531 7.3e-105
GEMPKEFO_00532 5.5e-117
GEMPKEFO_00533 6.5e-41 dut S dUTPase
GEMPKEFO_00534 2.1e-94 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GEMPKEFO_00535 3.7e-46 yqhY S Asp23 family, cell envelope-related function
GEMPKEFO_00536 4.2e-36 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GEMPKEFO_00537 3e-103 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GEMPKEFO_00538 5.8e-146 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GEMPKEFO_00539 1.2e-16 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GEMPKEFO_00540 6.1e-83 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GEMPKEFO_00541 2.6e-120 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GEMPKEFO_00542 6.6e-49 argR K Regulates arginine biosynthesis genes
GEMPKEFO_00543 9.3e-178 recN L May be involved in recombinational repair of damaged DNA
GEMPKEFO_00544 7.2e-83 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GEMPKEFO_00545 2.2e-30 ynzC S UPF0291 protein
GEMPKEFO_00546 5.9e-27 yneF S UPF0154 protein
GEMPKEFO_00547 1.6e-92 engB D Necessary for normal cell division and for the maintenance of normal septation
GEMPKEFO_00548 5.4e-44 MA20_27270 S mazG nucleotide pyrophosphohydrolase
GEMPKEFO_00549 2.9e-76 yciQ P membrane protein (DUF2207)
GEMPKEFO_00550 1.8e-19 D nuclear chromosome segregation
GEMPKEFO_00551 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GEMPKEFO_00552 1.6e-38 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GEMPKEFO_00553 2.8e-69 gluP 3.4.21.105 S Peptidase, S54 family
GEMPKEFO_00554 1.5e-25 yqgQ S Bacterial protein of unknown function (DUF910)
GEMPKEFO_00555 4.7e-158 glk 2.7.1.2 G Glucokinase
GEMPKEFO_00556 1.4e-45 yqhL P Rhodanese-like protein
GEMPKEFO_00557 2.8e-16 WQ51_02665 S Protein of unknown function (DUF3042)
GEMPKEFO_00558 5.4e-111 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GEMPKEFO_00559 1.8e-205 ynbB 4.4.1.1 P aluminum resistance
GEMPKEFO_00560 1.3e-45 glnR K Transcriptional regulator
GEMPKEFO_00561 2e-247 glnA 6.3.1.2 E glutamine synthetase
GEMPKEFO_00563 5.8e-37 ogt 2.1.1.63 H Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GEMPKEFO_00564 2.7e-48 S Domain of unknown function (DUF956)
GEMPKEFO_00565 6.3e-115 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GEMPKEFO_00566 7.2e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GEMPKEFO_00567 3.8e-105 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GEMPKEFO_00568 5.1e-102 cdsA 2.7.7.41 S Belongs to the CDS family
GEMPKEFO_00569 4.1e-157 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
GEMPKEFO_00570 5.9e-260 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GEMPKEFO_00571 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GEMPKEFO_00572 2.7e-66 rimP J Required for maturation of 30S ribosomal subunits
GEMPKEFO_00573 4.8e-170 nusA K Participates in both transcription termination and antitermination
GEMPKEFO_00574 1.4e-39 ylxR K Protein of unknown function (DUF448)
GEMPKEFO_00575 6.9e-26 ylxQ J ribosomal protein
GEMPKEFO_00576 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GEMPKEFO_00577 1.3e-55 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GEMPKEFO_00578 8.2e-120 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GEMPKEFO_00579 5.1e-96 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GEMPKEFO_00580 1.4e-131 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GEMPKEFO_00581 4.2e-56 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GEMPKEFO_00582 4.5e-274 dnaK O Heat shock 70 kDa protein
GEMPKEFO_00583 9.2e-161 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GEMPKEFO_00584 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GEMPKEFO_00586 4.6e-205 glnP P ABC transporter
GEMPKEFO_00587 2.6e-119 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMPKEFO_00588 1.5e-31
GEMPKEFO_00589 5.9e-111 ampC V Beta-lactamase
GEMPKEFO_00590 2.7e-110 cobQ S glutamine amidotransferase
GEMPKEFO_00591 2.3e-219 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
GEMPKEFO_00592 6.8e-86 tdk 2.7.1.21 F thymidine kinase
GEMPKEFO_00593 1.3e-177 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GEMPKEFO_00594 1.4e-89 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GEMPKEFO_00595 7.7e-135 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GEMPKEFO_00596 5e-100 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GEMPKEFO_00597 4.5e-97 atpB C it plays a direct role in the translocation of protons across the membrane
GEMPKEFO_00598 1.8e-15 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GEMPKEFO_00599 2.4e-39 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GEMPKEFO_00600 2.4e-58 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GEMPKEFO_00601 6.3e-266 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GEMPKEFO_00602 1.3e-141 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GEMPKEFO_00603 1.7e-236 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GEMPKEFO_00604 3e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GEMPKEFO_00605 4.1e-15 ywzB S Protein of unknown function (DUF1146)
GEMPKEFO_00606 9.3e-197 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GEMPKEFO_00607 1.2e-167 mbl D Cell shape determining protein MreB Mrl
GEMPKEFO_00608 9e-27 yidD S Could be involved in insertion of integral membrane proteins into the membrane
GEMPKEFO_00609 1.3e-13 S Protein of unknown function (DUF2969)
GEMPKEFO_00610 6.1e-187 rodA D Belongs to the SEDS family
GEMPKEFO_00611 2.1e-26 arsC 1.20.4.1 P Belongs to the ArsC family
GEMPKEFO_00612 9.5e-94 2.7.1.89 M Phosphotransferase enzyme family
GEMPKEFO_00613 1.1e-102 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
GEMPKEFO_00614 2.5e-21 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GEMPKEFO_00615 3.7e-120 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GEMPKEFO_00616 1.6e-287 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GEMPKEFO_00617 4.4e-140 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GEMPKEFO_00618 2.6e-154 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GEMPKEFO_00619 1.9e-90 stp 3.1.3.16 T phosphatase
GEMPKEFO_00620 5.7e-191 KLT serine threonine protein kinase
GEMPKEFO_00621 1.1e-108 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GEMPKEFO_00622 7.7e-59 thiN 2.7.6.2 H thiamine pyrophosphokinase
GEMPKEFO_00623 1.8e-96 tnp2 L Transposase
GEMPKEFO_00624 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GEMPKEFO_00625 4.5e-53 asp S Asp23 family, cell envelope-related function
GEMPKEFO_00626 2.5e-239 yloV S DAK2 domain fusion protein YloV
GEMPKEFO_00627 6.7e-247 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GEMPKEFO_00628 4.6e-140 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GEMPKEFO_00629 7e-26 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GEMPKEFO_00630 3.9e-101 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GEMPKEFO_00631 2.7e-211 smc D Required for chromosome condensation and partitioning
GEMPKEFO_00632 9.1e-149 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GEMPKEFO_00633 1.2e-39 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GEMPKEFO_00634 5e-204 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GEMPKEFO_00635 3.6e-42 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GEMPKEFO_00636 1.1e-26 ylqC S Belongs to the UPF0109 family
GEMPKEFO_00637 1.9e-57 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GEMPKEFO_00638 1.6e-113 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GEMPKEFO_00639 4.4e-61 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
GEMPKEFO_00640 1.3e-196 yfnA E amino acid
GEMPKEFO_00641 3e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GEMPKEFO_00642 1.8e-32 rpsT J Binds directly to 16S ribosomal RNA
GEMPKEFO_00643 5.6e-40 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GEMPKEFO_00644 1.8e-116 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GEMPKEFO_00645 3.8e-267 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GEMPKEFO_00646 1.8e-18 S Tetratricopeptide repeat
GEMPKEFO_00647 1.4e-215 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GEMPKEFO_00648 6e-196 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GEMPKEFO_00649 1e-197 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GEMPKEFO_00650 3.9e-249 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GEMPKEFO_00651 1.9e-300 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GEMPKEFO_00652 2.5e-22 ykzG S Belongs to the UPF0356 family
GEMPKEFO_00653 5.5e-25
GEMPKEFO_00654 2.2e-86 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GEMPKEFO_00655 1.7e-32 1.1.1.27 C L-malate dehydrogenase activity
GEMPKEFO_00656 2.2e-23 yktA S Belongs to the UPF0223 family
GEMPKEFO_00657 9.7e-77 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
GEMPKEFO_00658 0.0 typA T GTP-binding protein TypA
GEMPKEFO_00659 3.5e-148 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
GEMPKEFO_00660 7e-115 manY G PTS system
GEMPKEFO_00661 3.3e-148 manN G system, mannose fructose sorbose family IID component
GEMPKEFO_00662 3e-101 ftsW D Belongs to the SEDS family
GEMPKEFO_00663 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
GEMPKEFO_00664 1.1e-17 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
GEMPKEFO_00665 1.1e-71 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
GEMPKEFO_00666 1.5e-48 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GEMPKEFO_00667 2.4e-131 ylbL T Belongs to the peptidase S16 family
GEMPKEFO_00668 2.9e-96 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GEMPKEFO_00669 4.8e-30 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GEMPKEFO_00670 6.8e-103 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GEMPKEFO_00671 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GEMPKEFO_00672 4.7e-226 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GEMPKEFO_00673 9e-139 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GEMPKEFO_00674 5.2e-75 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GEMPKEFO_00675 5e-234 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GEMPKEFO_00676 6e-161 purD 6.3.4.13 F Belongs to the GARS family
GEMPKEFO_00677 3.2e-107 S Acyltransferase family
GEMPKEFO_00678 7.5e-195 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GEMPKEFO_00679 5e-122 K LysR substrate binding domain
GEMPKEFO_00681 2.2e-20
GEMPKEFO_00682 4.7e-59 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GEMPKEFO_00683 1.3e-267 argS 6.1.1.19 J Arginyl-tRNA synthetase
GEMPKEFO_00684 1.4e-50 comEA L Competence protein ComEA
GEMPKEFO_00685 2e-69 comEB 3.5.4.12 F ComE operon protein 2
GEMPKEFO_00686 1.6e-156 comEC S Competence protein ComEC
GEMPKEFO_00687 8.4e-105 holA 2.7.7.7 L DNA polymerase III delta subunit
GEMPKEFO_00688 1.3e-113 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GEMPKEFO_00689 6.7e-137 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
GEMPKEFO_00690 2.8e-118 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
GEMPKEFO_00691 4.7e-94 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
GEMPKEFO_00692 2.3e-229 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GEMPKEFO_00693 4.2e-33 ypmB S Protein conserved in bacteria
GEMPKEFO_00694 9e-143 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
GEMPKEFO_00695 7.6e-236 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GEMPKEFO_00696 7.2e-55 dnaD L DnaD domain protein
GEMPKEFO_00697 6.3e-82 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GEMPKEFO_00698 7.6e-78 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GEMPKEFO_00699 1.3e-125 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GEMPKEFO_00700 8.6e-94 M transferase activity, transferring glycosyl groups
GEMPKEFO_00701 2.8e-84 M Glycosyltransferase sugar-binding region containing DXD motif
GEMPKEFO_00702 1.2e-100 epsJ1 M Glycosyltransferase like family 2
GEMPKEFO_00705 2.2e-116 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GEMPKEFO_00706 4.7e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GEMPKEFO_00707 1.8e-56 yqeY S YqeY-like protein
GEMPKEFO_00709 1.8e-68 xerD L Phage integrase, N-terminal SAM-like domain
GEMPKEFO_00710 1e-106 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GEMPKEFO_00711 8.2e-108 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GEMPKEFO_00712 2.5e-132 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GEMPKEFO_00713 5e-276 yfmR S ABC transporter, ATP-binding protein
GEMPKEFO_00714 4.4e-156 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GEMPKEFO_00715 5.5e-57 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GEMPKEFO_00716 7.3e-134 yvgN C Aldo keto reductase
GEMPKEFO_00717 1.1e-35 K helix_turn_helix, mercury resistance
GEMPKEFO_00718 2.7e-113 S Aldo keto reductase
GEMPKEFO_00720 4.5e-81 ypmR E GDSL-like Lipase/Acylhydrolase
GEMPKEFO_00721 5.7e-53 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
GEMPKEFO_00722 3.6e-24 yozE S Belongs to the UPF0346 family
GEMPKEFO_00723 4.7e-133 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GEMPKEFO_00724 1.1e-96 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GEMPKEFO_00725 1.4e-84 dprA LU DNA protecting protein DprA
GEMPKEFO_00726 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GEMPKEFO_00727 9.5e-210 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GEMPKEFO_00728 5.8e-205 G PTS system Galactitol-specific IIC component
GEMPKEFO_00729 2.1e-153 M Exporter of polyketide antibiotics
GEMPKEFO_00730 1.4e-37 cas6 S Pfam:DUF2276
GEMPKEFO_00731 2.6e-207 csm1 S CRISPR-associated protein Csm1 family
GEMPKEFO_00732 6.7e-28 csm2 L Csm2 Type III-A
GEMPKEFO_00733 2.6e-70 csm3 L RAMP superfamily
GEMPKEFO_00734 2.5e-60 csm4 L CRISPR-associated RAMP protein, Csm4 family
GEMPKEFO_00735 4.3e-66 csm5 L RAMP superfamily
GEMPKEFO_00736 4.9e-88 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GEMPKEFO_00737 1.2e-30 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GEMPKEFO_00738 2.5e-71 csm6 S Psort location Cytoplasmic, score
GEMPKEFO_00739 1.1e-100 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GEMPKEFO_00740 1.1e-44 S Repeat protein
GEMPKEFO_00741 5.3e-278 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GEMPKEFO_00745 2.2e-86 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GEMPKEFO_00746 2.1e-67 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GEMPKEFO_00747 9.1e-43 yodB K Transcriptional regulator, HxlR family
GEMPKEFO_00748 7.4e-173 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GEMPKEFO_00749 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GEMPKEFO_00750 4.3e-126 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GEMPKEFO_00751 1.8e-97 udk 2.7.1.48 F Cytidine monophosphokinase
GEMPKEFO_00752 1.7e-68 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GEMPKEFO_00753 6.4e-12
GEMPKEFO_00754 3.9e-144 iunH2 3.2.2.1 F nucleoside hydrolase
GEMPKEFO_00755 1.7e-42 XK27_03960 S Protein of unknown function (DUF3013)
GEMPKEFO_00756 4.4e-118 prmA J Ribosomal protein L11 methyltransferase
GEMPKEFO_00757 6.3e-78 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GEMPKEFO_00758 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GEMPKEFO_00759 2.3e-54 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GEMPKEFO_00760 5.7e-56 3.1.3.18 J HAD-hyrolase-like
GEMPKEFO_00761 2.3e-43 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GEMPKEFO_00762 1.6e-128 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GEMPKEFO_00763 1.3e-75 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GEMPKEFO_00764 3.5e-204 pyrP F Permease
GEMPKEFO_00765 2.2e-114 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GEMPKEFO_00766 2.9e-191 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GEMPKEFO_00767 2.3e-85 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GEMPKEFO_00768 3.3e-88 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GEMPKEFO_00769 4.7e-134 K Transcriptional regulator
GEMPKEFO_00770 8.3e-144 ppaC 3.6.1.1 C inorganic pyrophosphatase
GEMPKEFO_00771 1.1e-114 glcR K DeoR C terminal sensor domain
GEMPKEFO_00772 9.1e-172 patA 2.6.1.1 E Aminotransferase
GEMPKEFO_00773 9.2e-88 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GEMPKEFO_00775 1.1e-35 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GEMPKEFO_00776 6.1e-173 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GEMPKEFO_00777 1.8e-36 rnhA 3.1.26.4 L Ribonuclease HI
GEMPKEFO_00778 8.1e-21 S Family of unknown function (DUF5322)
GEMPKEFO_00779 3.8e-256 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
GEMPKEFO_00780 1.8e-38
GEMPKEFO_00785 7.2e-13 V PFAM secretion protein HlyD family protein
GEMPKEFO_00786 9.6e-149 EGP Sugar (and other) transporter
GEMPKEFO_00787 7.8e-78 trmK 2.1.1.217 S SAM-dependent methyltransferase
GEMPKEFO_00788 1.9e-104 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GEMPKEFO_00789 6.5e-184 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GEMPKEFO_00790 3.9e-71 alkD L DNA alkylation repair enzyme
GEMPKEFO_00791 4.9e-136 EG EamA-like transporter family
GEMPKEFO_00792 2.8e-150 S Tetratricopeptide repeat protein
GEMPKEFO_00793 3.4e-204 hisS 6.1.1.21 J histidyl-tRNA synthetase
GEMPKEFO_00794 1.5e-298 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GEMPKEFO_00795 5.4e-127 corA P CorA-like Mg2+ transporter protein
GEMPKEFO_00796 1.9e-160 nhaC C Na H antiporter NhaC
GEMPKEFO_00797 7.2e-130 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GEMPKEFO_00798 2.6e-81 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
GEMPKEFO_00800 1.9e-92 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GEMPKEFO_00801 2.3e-159 iscS 2.8.1.7 E Aminotransferase class V
GEMPKEFO_00802 3.7e-41 XK27_04120 S Putative amino acid metabolism
GEMPKEFO_00803 1.6e-202 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GEMPKEFO_00804 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GEMPKEFO_00805 4.3e-15 S Protein of unknown function (DUF2929)
GEMPKEFO_00806 0.0 dnaE 2.7.7.7 L DNA polymerase
GEMPKEFO_00807 1.9e-167 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GEMPKEFO_00808 3.7e-310 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GEMPKEFO_00810 1e-39 ypaA S Protein of unknown function (DUF1304)
GEMPKEFO_00811 3.2e-83 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GEMPKEFO_00812 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GEMPKEFO_00813 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GEMPKEFO_00814 4.2e-202 FbpA K Fibronectin-binding protein
GEMPKEFO_00815 3.1e-40 K Transcriptional regulator
GEMPKEFO_00816 1.8e-51 degV S EDD domain protein, DegV family
GEMPKEFO_00817 3.7e-50 degV S EDD domain protein, DegV family
GEMPKEFO_00818 1.5e-69 lepB 3.4.21.89 U Signal peptidase, peptidase S26
GEMPKEFO_00819 2.4e-40 6.3.3.2 S ASCH
GEMPKEFO_00820 6.3e-187 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GEMPKEFO_00821 7e-81 yjjH S Calcineurin-like phosphoesterase
GEMPKEFO_00822 1.8e-95 EG EamA-like transporter family
GEMPKEFO_00823 2.5e-84 natB CP ABC-type Na efflux pump, permease component
GEMPKEFO_00824 6.2e-112 natA S Domain of unknown function (DUF4162)
GEMPKEFO_00825 3.7e-23 K Acetyltransferase (GNAT) domain
GEMPKEFO_00827 8.5e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GEMPKEFO_00828 4.5e-228 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GEMPKEFO_00829 2.7e-171 rpsA 1.17.7.4 J Ribosomal protein S1
GEMPKEFO_00830 1.4e-58 arsC 1.20.4.1 T Low molecular weight phosphatase family
GEMPKEFO_00831 1.5e-151 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GEMPKEFO_00832 1.4e-28 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GEMPKEFO_00833 1.2e-174 dltB M MBOAT, membrane-bound O-acyltransferase family
GEMPKEFO_00834 2e-219 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GEMPKEFO_00835 2.6e-07 dltX S D-Ala-teichoic acid biosynthesis protein
GEMPKEFO_00836 1.5e-90 recO L Involved in DNA repair and RecF pathway recombination
GEMPKEFO_00837 1e-154 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GEMPKEFO_00838 3.6e-30 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
GEMPKEFO_00839 1.2e-58 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GEMPKEFO_00840 3.5e-153 phoH T phosphate starvation-inducible protein PhoH
GEMPKEFO_00841 1.5e-83 lytH 3.5.1.28 M Ami_3
GEMPKEFO_00842 2e-86 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GEMPKEFO_00843 7.7e-12 M Lysin motif
GEMPKEFO_00844 1e-127 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GEMPKEFO_00845 4.9e-60 ypbB 5.1.3.1 S Helix-turn-helix domain
GEMPKEFO_00846 2.9e-221 mntH P H( )-stimulated, divalent metal cation uptake system
GEMPKEFO_00847 1.3e-44 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
GEMPKEFO_00848 1.4e-120 ica2 GT2 M Glycosyl transferase family group 2
GEMPKEFO_00849 1.7e-44
GEMPKEFO_00850 9.5e-92 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GEMPKEFO_00852 3.7e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GEMPKEFO_00853 1.4e-214 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GEMPKEFO_00854 2.5e-281 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GEMPKEFO_00855 3.7e-168 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GEMPKEFO_00856 1.1e-109 pepE 3.4.13.21 E Alpha/beta hydrolase of unknown function (DUF915)
GEMPKEFO_00857 4.4e-69 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMPKEFO_00859 3e-81 XK27_07525 3.6.1.55 F Hydrolase, nudix family
GEMPKEFO_00860 5.7e-57 3.6.1.27 I Acid phosphatase homologues
GEMPKEFO_00861 3e-68 maa 2.3.1.79 S Maltose acetyltransferase
GEMPKEFO_00862 1.3e-73 2.3.1.178 M GNAT acetyltransferase
GEMPKEFO_00864 3.9e-08 XK27_10540 S ParE toxin of type II toxin-antitoxin system, parDE
GEMPKEFO_00865 1e-08 D Antitoxin Phd_YefM, type II toxin-antitoxin system
GEMPKEFO_00866 5.5e-197 ade 3.5.4.2 F Adenine deaminase C-terminal domain
GEMPKEFO_00867 4.3e-63 ypsA S Belongs to the UPF0398 family
GEMPKEFO_00868 3.7e-188 nhaC C Na H antiporter NhaC
GEMPKEFO_00869 1.8e-76 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GEMPKEFO_00870 1.9e-293 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
GEMPKEFO_00871 1.2e-112 xerD D recombinase XerD
GEMPKEFO_00872 1.8e-124 cvfB S S1 domain
GEMPKEFO_00873 4.1e-51 yeaL S Protein of unknown function (DUF441)
GEMPKEFO_00874 4.5e-58 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GEMPKEFO_00875 3.4e-100 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GEMPKEFO_00876 1.1e-56 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GEMPKEFO_00877 2e-58 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GEMPKEFO_00878 4.6e-37 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GEMPKEFO_00879 7.8e-218 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GEMPKEFO_00880 7e-79 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GEMPKEFO_00881 7.9e-123 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GEMPKEFO_00882 6.6e-178 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GEMPKEFO_00883 1.8e-101 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GEMPKEFO_00884 1.4e-71
GEMPKEFO_00886 3.7e-12
GEMPKEFO_00887 1.6e-42 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GEMPKEFO_00888 1e-27 ysxB J Cysteine protease Prp
GEMPKEFO_00889 8.3e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
GEMPKEFO_00892 1e-59 S RRXRR protein
GEMPKEFO_00894 2.2e-08 S Protein of unknown function (DUF2922)
GEMPKEFO_00896 3.7e-16 K DNA-templated transcription, initiation
GEMPKEFO_00898 1.5e-66 H Methyltransferase domain
GEMPKEFO_00899 1.4e-77 cps2D 5.1.3.2 M RmlD substrate binding domain
GEMPKEFO_00900 3.3e-41 wecD M Acetyltransferase (GNAT) family
GEMPKEFO_00902 1.8e-25 ybl78 L Conserved phage C-terminus (Phg_2220_C)
GEMPKEFO_00903 3.4e-41 S Protein of unknown function (DUF1211)
GEMPKEFO_00905 5e-86 1.1.1.1 C Zinc-binding dehydrogenase
GEMPKEFO_00906 2.7e-30 S CHY zinc finger
GEMPKEFO_00907 6.6e-41 K Transcriptional regulator
GEMPKEFO_00908 1.2e-83 qorB 1.6.5.2 GM NmrA-like family
GEMPKEFO_00909 5.8e-10
GEMPKEFO_00910 2.6e-70 M Glycosyl transferases group 1
GEMPKEFO_00911 1.1e-71 M Glycosyl transferases group 1
GEMPKEFO_00912 2.4e-178 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
GEMPKEFO_00913 1.1e-144 lspL 5.1.3.6 GM RmlD substrate binding domain
GEMPKEFO_00914 3.4e-102 cps2I S Psort location CytoplasmicMembrane, score
GEMPKEFO_00915 6.8e-116 S Glycosyltransferase WbsX
GEMPKEFO_00916 1.5e-115 S Glycosyltransferase WbsX
GEMPKEFO_00917 2.9e-16
GEMPKEFO_00918 2.7e-25 S Psort location Cytoplasmic, score
GEMPKEFO_00919 1.1e-06 S EpsG family
GEMPKEFO_00920 2.7e-57 pglI 2.4.1.293 GT2 M Glycosyltransferase like family 2
GEMPKEFO_00921 4.3e-41 GT2 S Glycosyltransferase
GEMPKEFO_00922 4.4e-75 M Glycosyltransferase Family 4
GEMPKEFO_00923 1e-82 gtf1 2.4.1.52 GT4 M glycosyl transferase group 1
GEMPKEFO_00924 6.2e-122 2.4.1.52 GT4 M Glycosyl transferases group 1
GEMPKEFO_00925 6.5e-25 pglD 2.3.1.203 S Bacterial transferase hexapeptide (six repeats)
GEMPKEFO_00926 2.3e-76 epsL M Bacterial sugar transferase
GEMPKEFO_00927 2.4e-167 2.6.1.102 M Belongs to the DegT DnrJ EryC1 family
GEMPKEFO_00928 7.1e-219 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 M Psort location CytoplasmicMembrane, score
GEMPKEFO_00929 7.2e-65 cpsD D AAA domain
GEMPKEFO_00930 1.2e-47 cps4C M Chain length determinant protein
GEMPKEFO_00931 1.8e-42 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
GEMPKEFO_00932 7.7e-178 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
GEMPKEFO_00933 8.1e-81
GEMPKEFO_00934 1.2e-82 yjfP S COG1073 Hydrolases of the alpha beta superfamily
GEMPKEFO_00935 2.3e-113 yitU 3.1.3.104 S hydrolase
GEMPKEFO_00936 5.6e-60 speG J Acetyltransferase (GNAT) domain
GEMPKEFO_00937 7e-189 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GEMPKEFO_00938 1.1e-23 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
GEMPKEFO_00939 4.5e-205 pipD E Dipeptidase
GEMPKEFO_00940 9.5e-44
GEMPKEFO_00941 9.1e-65 K helix_turn_helix, arabinose operon control protein
GEMPKEFO_00942 1.5e-53 S Membrane
GEMPKEFO_00943 0.0 rafA 3.2.1.22 G alpha-galactosidase
GEMPKEFO_00944 3.6e-60 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
GEMPKEFO_00945 1.2e-308 L Helicase C-terminal domain protein
GEMPKEFO_00946 1.1e-50 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
GEMPKEFO_00947 5.9e-39 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
GEMPKEFO_00948 2.4e-113 2.7.7.65 T diguanylate cyclase activity
GEMPKEFO_00949 0.0 ydaN S Bacterial cellulose synthase subunit
GEMPKEFO_00950 1.2e-201 ydaM M Glycosyl transferase family group 2
GEMPKEFO_00951 5.8e-206 S Protein conserved in bacteria
GEMPKEFO_00952 7.1e-182
GEMPKEFO_00953 3.3e-128 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
GEMPKEFO_00954 7.3e-44 2.7.7.65 T GGDEF domain
GEMPKEFO_00955 6.2e-145 pbuO_1 S Permease family
GEMPKEFO_00956 6.6e-157 ndh 1.6.99.3 C NADH dehydrogenase
GEMPKEFO_00957 4.4e-105 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GEMPKEFO_00958 1.1e-96 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GEMPKEFO_00959 1.8e-219 cydD CO ABC transporter transmembrane region
GEMPKEFO_00960 7.8e-204 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GEMPKEFO_00961 2.5e-141 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
GEMPKEFO_00962 2.1e-194 cydA 1.10.3.14 C ubiquinol oxidase
GEMPKEFO_00963 6.9e-160 asnA 6.3.1.1 F aspartate--ammonia ligase
GEMPKEFO_00964 3.1e-27 xlyB 3.5.1.28 CBM50 M LysM domain
GEMPKEFO_00965 5e-19 glpE P Rhodanese Homology Domain
GEMPKEFO_00966 4.2e-49 lytE M LysM domain protein
GEMPKEFO_00967 2.6e-91 T Calcineurin-like phosphoesterase superfamily domain
GEMPKEFO_00968 3.7e-84 2.7.7.12 C Domain of unknown function (DUF4931)
GEMPKEFO_00969 1.5e-83 L Probable transposase
GEMPKEFO_00970 6.3e-20 M domain protein
GEMPKEFO_00971 3e-35 agrA KT Response regulator of the LytR AlgR family
GEMPKEFO_00972 1.2e-44 2.7.13.3 T protein histidine kinase activity
GEMPKEFO_00973 0.0 pepN 3.4.11.2 E aminopeptidase
GEMPKEFO_00974 4.2e-35
GEMPKEFO_00976 7.6e-125 D CobQ CobB MinD ParA nucleotide binding domain protein
GEMPKEFO_00977 9.6e-08 arbG1 K antiterminator
GEMPKEFO_00978 2.9e-14 bglG K CAT RNA binding domain
GEMPKEFO_00979 1.2e-27 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GEMPKEFO_00980 2.3e-218 L Probable transposase
GEMPKEFO_00981 4.2e-45 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GEMPKEFO_00982 6.5e-149 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMPKEFO_00983 6.6e-38 S Replication initiator protein A (RepA) N-terminus
GEMPKEFO_00984 1.6e-108 L Initiator Replication protein
GEMPKEFO_00987 5.6e-181 L PLD-like domain
GEMPKEFO_00988 1.6e-77 S Fic/DOC family
GEMPKEFO_00989 8.7e-21 S Fic/DOC family
GEMPKEFO_00990 9.9e-10 S Fic/DOC family
GEMPKEFO_00991 8.3e-13 S Fic/DOC family
GEMPKEFO_00992 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GEMPKEFO_00993 1.7e-60 K DeoR C terminal sensor domain
GEMPKEFO_00994 1.8e-44 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GEMPKEFO_00995 4.4e-52 S Acetyltransferase (GNAT) domain
GEMPKEFO_00996 1.5e-71 ywlG S Belongs to the UPF0340 family
GEMPKEFO_00997 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
GEMPKEFO_00998 1.1e-95 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GEMPKEFO_00999 8.8e-58 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GEMPKEFO_01000 4e-179 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
GEMPKEFO_01001 4.4e-14 ybaN S Protein of unknown function (DUF454)
GEMPKEFO_01002 1.5e-237 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GEMPKEFO_01003 4.7e-199 frdC 1.3.5.4 C FAD binding domain
GEMPKEFO_01004 6.9e-206 yflS P Sodium:sulfate symporter transmembrane region
GEMPKEFO_01005 7.4e-18 yncA 2.3.1.79 S Maltose acetyltransferase
GEMPKEFO_01006 1.1e-161 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GEMPKEFO_01007 8.4e-60 dedA 3.1.3.1 S SNARE associated Golgi protein
GEMPKEFO_01008 2.9e-96 ypuA S Protein of unknown function (DUF1002)
GEMPKEFO_01009 2.8e-12 fhaB M Rib/alpha-like repeat
GEMPKEFO_01018 2.9e-18 D nuclear chromosome segregation
GEMPKEFO_01022 1.3e-174 2.1.1.72, 3.1.21.3 V HsdM N-terminal domain
GEMPKEFO_01023 4.2e-45 yjaB_1 K Acetyltransferase (GNAT) domain
GEMPKEFO_01025 1e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GEMPKEFO_01026 0.0 O Belongs to the peptidase S8 family
GEMPKEFO_01031 6.3e-54 1.14.12.17 C Oxidoreductase NAD-binding domain
GEMPKEFO_01032 1.3e-30 tlpA2 L Transposase IS200 like
GEMPKEFO_01033 7.5e-44 L hmm pf00665
GEMPKEFO_01034 1.5e-124 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
GEMPKEFO_01035 3.2e-85 dps P Ferritin-like domain
GEMPKEFO_01036 3.8e-92 L Transposase, IS605 OrfB family
GEMPKEFO_01037 1.7e-158 L transposase, IS605 OrfB family
GEMPKEFO_01039 1.3e-73 draG O ADP-ribosylglycohydrolase
GEMPKEFO_01040 5.5e-102 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GEMPKEFO_01041 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GEMPKEFO_01042 1.9e-61 divIVA D DivIVA domain protein
GEMPKEFO_01043 3.5e-82 ylmH S S4 domain protein
GEMPKEFO_01044 3e-19 yggT S YGGT family
GEMPKEFO_01045 2.5e-32 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GEMPKEFO_01046 3.4e-180 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GEMPKEFO_01047 5.2e-190 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GEMPKEFO_01048 2.2e-61 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GEMPKEFO_01049 8.9e-153 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GEMPKEFO_01050 4.5e-186 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GEMPKEFO_01051 8.7e-136 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GEMPKEFO_01052 4e-282 ftsI 3.4.16.4 M Penicillin-binding Protein
GEMPKEFO_01053 2.5e-11 ftsL D cell division protein FtsL
GEMPKEFO_01054 8e-142 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GEMPKEFO_01055 1.5e-55 mraZ K Belongs to the MraZ family
GEMPKEFO_01056 4.5e-08 S Protein of unknown function (DUF3397)
GEMPKEFO_01057 1.2e-155 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
GEMPKEFO_01059 9.8e-100 D Alpha beta
GEMPKEFO_01060 3.7e-109 aatB ET ABC transporter substrate-binding protein
GEMPKEFO_01061 1.8e-89 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMPKEFO_01062 1.9e-94 glnP P ABC transporter permease
GEMPKEFO_01063 1.8e-126 minD D Belongs to the ParA family
GEMPKEFO_01064 8.3e-77 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
GEMPKEFO_01065 1.5e-54 mreD M rod shape-determining protein MreD
GEMPKEFO_01066 2.1e-88 mreC M Involved in formation and maintenance of cell shape
GEMPKEFO_01067 3.6e-156 mreB D cell shape determining protein MreB
GEMPKEFO_01068 4.5e-21 K Cold shock
GEMPKEFO_01069 6.2e-80 radC L DNA repair protein
GEMPKEFO_01070 3.7e-137 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GEMPKEFO_01071 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GEMPKEFO_01072 3.2e-196 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GEMPKEFO_01073 3.8e-162 iscS2 2.8.1.7 E Aminotransferase class V
GEMPKEFO_01074 4.4e-175 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GEMPKEFO_01075 4.2e-56 ytsP 1.8.4.14 T GAF domain-containing protein
GEMPKEFO_01076 6.3e-100 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GEMPKEFO_01077 2e-24 yueI S Protein of unknown function (DUF1694)
GEMPKEFO_01078 5.2e-189 rarA L recombination factor protein RarA
GEMPKEFO_01080 3.2e-73 usp6 T universal stress protein
GEMPKEFO_01081 3.8e-54 tag 3.2.2.20 L glycosylase
GEMPKEFO_01082 2.2e-199 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GEMPKEFO_01083 3.5e-125 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GEMPKEFO_01086 1.5e-75 yviA S Protein of unknown function (DUF421)
GEMPKEFO_01087 1.8e-27 S Protein of unknown function (DUF3290)
GEMPKEFO_01088 2.3e-279 pbp2b 3.4.16.4 M Penicillin-binding Protein
GEMPKEFO_01089 3.5e-296 S membrane
GEMPKEFO_01090 9.6e-81 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GEMPKEFO_01091 3.1e-219 recJ L Single-stranded-DNA-specific exonuclease RecJ
GEMPKEFO_01092 5.8e-101 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
GEMPKEFO_01093 2.6e-140 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GEMPKEFO_01095 1.4e-16
GEMPKEFO_01096 5.6e-200 oatA I Acyltransferase
GEMPKEFO_01097 2.2e-214 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GEMPKEFO_01098 1.9e-306 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GEMPKEFO_01099 2e-140 hprA 1.1.1.29 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GEMPKEFO_01102 1.5e-41 S Phosphoesterase
GEMPKEFO_01103 5e-73 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GEMPKEFO_01104 1.1e-60 yslB S Protein of unknown function (DUF2507)
GEMPKEFO_01105 9.9e-41 trxA O Belongs to the thioredoxin family
GEMPKEFO_01106 2.9e-310 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GEMPKEFO_01107 1.2e-17 cvpA S Colicin V production protein
GEMPKEFO_01108 1.4e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
GEMPKEFO_01109 1.9e-33 yrzB S Belongs to the UPF0473 family
GEMPKEFO_01110 5.2e-59 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GEMPKEFO_01111 2.1e-36 yrzL S Belongs to the UPF0297 family
GEMPKEFO_01112 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GEMPKEFO_01113 5.1e-187 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GEMPKEFO_01114 1.6e-121 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GEMPKEFO_01115 7.5e-13
GEMPKEFO_01116 8e-147 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GEMPKEFO_01117 3.2e-66 yrjD S LUD domain
GEMPKEFO_01118 1.1e-244 lutB C 4Fe-4S dicluster domain
GEMPKEFO_01119 6.9e-117 lutA C Cysteine-rich domain
GEMPKEFO_01120 2e-208 yfnA E Amino Acid
GEMPKEFO_01122 4.3e-61 uspA T universal stress protein
GEMPKEFO_01124 1.8e-12 yajC U Preprotein translocase
GEMPKEFO_01125 2.9e-207 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GEMPKEFO_01126 2.1e-183 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GEMPKEFO_01127 2.8e-153 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GEMPKEFO_01128 4.3e-72 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GEMPKEFO_01129 8.4e-226 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GEMPKEFO_01130 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GEMPKEFO_01131 2.6e-182 rny S Endoribonuclease that initiates mRNA decay
GEMPKEFO_01132 2.3e-159 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GEMPKEFO_01133 4.3e-85 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GEMPKEFO_01134 1.5e-63 ymfM S Helix-turn-helix domain
GEMPKEFO_01135 2.4e-90 IQ Enoyl-(Acyl carrier protein) reductase
GEMPKEFO_01136 8.4e-150 ymfH S Peptidase M16
GEMPKEFO_01137 5.3e-109 ymfF S Peptidase M16 inactive domain protein
GEMPKEFO_01138 4.5e-284 ftsK D Belongs to the FtsK SpoIIIE SftA family
GEMPKEFO_01139 4.4e-86 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GEMPKEFO_01140 7.5e-99 rrmA 2.1.1.187 H Methyltransferase
GEMPKEFO_01141 6.4e-61 ybaK J Aminoacyl-tRNA editing domain
GEMPKEFO_01142 5.9e-164 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GEMPKEFO_01143 8.1e-198 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GEMPKEFO_01144 4.2e-21 cutC P Participates in the control of copper homeostasis
GEMPKEFO_01145 5.3e-131 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GEMPKEFO_01146 7.5e-29 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GEMPKEFO_01147 2.6e-226 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GEMPKEFO_01148 5.3e-68 ybbR S YbbR-like protein
GEMPKEFO_01149 8.5e-127 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GEMPKEFO_01150 2.4e-71 S Protein of unknown function (DUF1361)
GEMPKEFO_01151 1.2e-115 murB 1.3.1.98 M Cell wall formation
GEMPKEFO_01152 3e-69 dnaQ 2.7.7.7 L DNA polymerase III
GEMPKEFO_01153 2.5e-56 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
GEMPKEFO_01154 1.3e-142 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GEMPKEFO_01155 6.8e-106 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GEMPKEFO_01156 1.8e-116 ycsE S Sucrose-6F-phosphate phosphohydrolase
GEMPKEFO_01157 3.1e-42 yxjI
GEMPKEFO_01158 6.9e-70 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GEMPKEFO_01159 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GEMPKEFO_01160 2.8e-19 secG U Preprotein translocase
GEMPKEFO_01161 9.2e-180 clcA P chloride
GEMPKEFO_01162 6.7e-146 lmrP E Major Facilitator Superfamily
GEMPKEFO_01163 1.8e-169 T PhoQ Sensor
GEMPKEFO_01164 5e-104 K response regulator
GEMPKEFO_01165 5e-132 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GEMPKEFO_01166 9.5e-234 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GEMPKEFO_01167 2.3e-128 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GEMPKEFO_01168 1.3e-208 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GEMPKEFO_01169 6.1e-180 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GEMPKEFO_01170 2.9e-137 cggR K Putative sugar-binding domain
GEMPKEFO_01172 1.1e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GEMPKEFO_01173 1.8e-149 whiA K May be required for sporulation
GEMPKEFO_01174 8.2e-153 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GEMPKEFO_01175 7.5e-126 rapZ S Displays ATPase and GTPase activities
GEMPKEFO_01176 5.9e-80 ylbE GM NAD dependent epimerase dehydratase family protein
GEMPKEFO_01177 1.1e-83 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GEMPKEFO_01178 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GEMPKEFO_01179 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GEMPKEFO_01180 1.4e-272 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GEMPKEFO_01181 1.1e-112 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GEMPKEFO_01182 2.5e-132 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GEMPKEFO_01183 1.6e-26 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GEMPKEFO_01184 4.1e-08 KT PspC domain protein
GEMPKEFO_01185 1.2e-85 phoR 2.7.13.3 T Histidine kinase
GEMPKEFO_01186 6e-86 K response regulator
GEMPKEFO_01187 4.1e-68 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
GEMPKEFO_01188 4.9e-164 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GEMPKEFO_01189 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GEMPKEFO_01190 3.1e-95 yeaN P Major Facilitator Superfamily
GEMPKEFO_01191 6e-81 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GEMPKEFO_01192 1e-45 comFC S Competence protein
GEMPKEFO_01193 5.4e-128 comFA L Helicase C-terminal domain protein
GEMPKEFO_01194 1.6e-157 tagO 2.7.8.33, 2.7.8.35 M transferase
GEMPKEFO_01195 4.1e-296 ydaO E amino acid
GEMPKEFO_01196 3.3e-269 aha1 P COG COG0474 Cation transport ATPase
GEMPKEFO_01197 1.8e-271 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GEMPKEFO_01198 1.8e-33 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GEMPKEFO_01199 2.4e-33 S CAAX protease self-immunity
GEMPKEFO_01200 2.8e-98 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GEMPKEFO_01201 1.2e-253 uup S ABC transporter, ATP-binding protein
GEMPKEFO_01202 2.9e-161 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GEMPKEFO_01203 4.3e-28 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
GEMPKEFO_01204 2.8e-70 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
GEMPKEFO_01205 2.7e-140 ansA 3.5.1.1 EJ Asparaginase
GEMPKEFO_01206 5.5e-82 fat 3.1.2.21 I Acyl-ACP thioesterase
GEMPKEFO_01207 3.2e-92 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GEMPKEFO_01208 1.4e-40 yabA L Involved in initiation control of chromosome replication
GEMPKEFO_01209 1e-83 holB 2.7.7.7 L DNA polymerase III
GEMPKEFO_01210 1.8e-65 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GEMPKEFO_01211 9.2e-29 yaaL S Protein of unknown function (DUF2508)
GEMPKEFO_01212 2.2e-97 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GEMPKEFO_01213 7e-34 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GEMPKEFO_01214 1.5e-210 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GEMPKEFO_01215 4.8e-61 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GEMPKEFO_01216 1.1e-75 rsmC 2.1.1.172 J Methyltransferase
GEMPKEFO_01217 1.2e-27 nrdH O Glutaredoxin
GEMPKEFO_01218 4.8e-45 nrdI F NrdI Flavodoxin like
GEMPKEFO_01219 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GEMPKEFO_01220 1.4e-160 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GEMPKEFO_01221 2.1e-301 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GEMPKEFO_01222 1.4e-54
GEMPKEFO_01223 2.6e-48 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GEMPKEFO_01224 7.6e-75 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GEMPKEFO_01225 1.6e-115 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GEMPKEFO_01226 5e-67 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GEMPKEFO_01227 7.7e-84 nusG K Participates in transcription elongation, termination and antitermination
GEMPKEFO_01228 2.6e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GEMPKEFO_01229 2.1e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GEMPKEFO_01230 7e-71 yacP S YacP-like NYN domain
GEMPKEFO_01231 1.6e-108 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GEMPKEFO_01232 6.4e-56 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GEMPKEFO_01233 1.8e-206 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GEMPKEFO_01234 2.9e-247 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GEMPKEFO_01235 8.2e-154 yacL S domain protein
GEMPKEFO_01236 3.5e-223 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GEMPKEFO_01237 3.1e-74 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
GEMPKEFO_01238 4.3e-19 HA62_12640 S GCN5-related N-acetyl-transferase
GEMPKEFO_01239 5.8e-223 pepC 3.4.22.40 E Peptidase C1-like family
GEMPKEFO_01240 1.4e-33 S Enterocin A Immunity
GEMPKEFO_01241 8.3e-85 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GEMPKEFO_01242 4.5e-129 mleP2 S Sodium Bile acid symporter family
GEMPKEFO_01243 3.5e-116 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GEMPKEFO_01245 2.3e-43 ydcK S Belongs to the SprT family
GEMPKEFO_01246 3.3e-252 yhgF K Tex-like protein N-terminal domain protein
GEMPKEFO_01247 6.8e-129 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GEMPKEFO_01248 1.6e-242 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GEMPKEFO_01249 1.2e-89 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GEMPKEFO_01250 6.4e-96 gntR1 K UbiC transcription regulator-associated domain protein
GEMPKEFO_01251 1.2e-90 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GEMPKEFO_01253 1.1e-07
GEMPKEFO_01254 1.6e-197 dtpT U amino acid peptide transporter
GEMPKEFO_01256 7.9e-91 L PFAM Integrase catalytic region
GEMPKEFO_01257 7.9e-21 L Helix-turn-helix domain
GEMPKEFO_01261 5.1e-08
GEMPKEFO_01267 6.1e-67 L Probable transposase
GEMPKEFO_01268 9.4e-214 yjeM E Amino Acid
GEMPKEFO_01269 5.6e-190 glnPH2 P ABC transporter permease
GEMPKEFO_01270 2.3e-112 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMPKEFO_01271 4.1e-43 E lipolytic protein G-D-S-L family
GEMPKEFO_01272 1.7e-133 coaA 2.7.1.33 F Pantothenic acid kinase
GEMPKEFO_01273 3.8e-274 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GEMPKEFO_01274 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GEMPKEFO_01275 9.5e-161 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GEMPKEFO_01276 1.1e-95 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GEMPKEFO_01277 1.9e-67 XK27_09620 S NADPH-dependent FMN reductase
GEMPKEFO_01278 1.1e-157 XK27_09615 S reductase
GEMPKEFO_01279 1.2e-39 2.7.7.65 T phosphorelay sensor kinase activity
GEMPKEFO_01280 4.2e-146 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GEMPKEFO_01281 2.4e-54 cps3I G Acyltransferase family
GEMPKEFO_01282 3.6e-14
GEMPKEFO_01283 1.6e-16 S Bacterial membrane protein YfhO
GEMPKEFO_01284 1.3e-10 S Bacterial membrane protein YfhO
GEMPKEFO_01285 2.8e-80 S Bacterial membrane protein YfhO
GEMPKEFO_01286 1.6e-164 XK27_08315 M Sulfatase
GEMPKEFO_01287 2.6e-60 S Psort location CytoplasmicMembrane, score
GEMPKEFO_01288 1.4e-22 ganB 3.2.1.89 G arabinogalactan
GEMPKEFO_01289 5.3e-78 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GEMPKEFO_01290 8.3e-178 thrC 4.2.3.1 E Threonine synthase
GEMPKEFO_01291 4e-128 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GEMPKEFO_01292 8.8e-168 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
GEMPKEFO_01293 1.6e-88 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GEMPKEFO_01294 1.1e-56 S peptidoglycan catabolic process
GEMPKEFO_01296 8.4e-168 mdtG EGP Major facilitator Superfamily
GEMPKEFO_01297 8.2e-251 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
GEMPKEFO_01298 1.7e-83 treR K UTRA
GEMPKEFO_01299 7.3e-259 treB G phosphotransferase system
GEMPKEFO_01300 4.6e-63 3.1.3.73 G phosphoglycerate mutase
GEMPKEFO_01301 9.2e-82 pncA Q isochorismatase
GEMPKEFO_01302 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GEMPKEFO_01303 3.4e-103 ydhQ K UbiC transcription regulator-associated domain protein
GEMPKEFO_01304 2.3e-171 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GEMPKEFO_01305 3.6e-41 K Transcriptional regulator, HxlR family
GEMPKEFO_01306 2.9e-164 C Luciferase-like monooxygenase
GEMPKEFO_01307 1.7e-67 1.5.1.38 S NADPH-dependent FMN reductase
GEMPKEFO_01308 1.5e-117 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GEMPKEFO_01309 1.8e-76 L haloacid dehalogenase-like hydrolase
GEMPKEFO_01310 1.8e-61 EG EamA-like transporter family
GEMPKEFO_01311 3.1e-118 K AI-2E family transporter
GEMPKEFO_01312 3.8e-173 malY 4.4.1.8 E Aminotransferase, class I
GEMPKEFO_01313 2.1e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GEMPKEFO_01314 7.8e-60 yfjR K WYL domain
GEMPKEFO_01315 1.8e-11 S Mor transcription activator family
GEMPKEFO_01317 1e-11 S zinc-ribbon domain
GEMPKEFO_01321 7.2e-18
GEMPKEFO_01322 5.8e-100 V domain protein
GEMPKEFO_01323 2.2e-119 xth 3.1.11.2 L exodeoxyribonuclease III
GEMPKEFO_01324 2e-17
GEMPKEFO_01325 1.1e-104 azlC E AzlC protein
GEMPKEFO_01326 1.3e-38 azlD S branched-chain amino acid
GEMPKEFO_01327 2.1e-66 I alpha/beta hydrolase fold
GEMPKEFO_01328 3.1e-25
GEMPKEFO_01329 1.2e-58 3.6.1.27 I phosphatase
GEMPKEFO_01330 1.2e-22
GEMPKEFO_01331 2.4e-95 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GEMPKEFO_01332 3.1e-89 sirR K Helix-turn-helix diphteria tox regulatory element
GEMPKEFO_01333 3.1e-27 cspC K Cold shock protein
GEMPKEFO_01334 4.3e-82 thrE S Putative threonine/serine exporter
GEMPKEFO_01335 1.3e-49 S Threonine/Serine exporter, ThrE
GEMPKEFO_01336 2.8e-125 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GEMPKEFO_01337 3.8e-87 S Sucrose-6F-phosphate phosphohydrolase
GEMPKEFO_01338 5.5e-34 trxA O Belongs to the thioredoxin family
GEMPKEFO_01339 2.7e-21 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GEMPKEFO_01340 1.1e-21 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GEMPKEFO_01341 7.3e-65 degV S Uncharacterised protein, DegV family COG1307
GEMPKEFO_01343 9.6e-54 queT S QueT transporter
GEMPKEFO_01344 3.9e-34 XK27_01315 S Protein of unknown function (DUF2829)
GEMPKEFO_01345 3.2e-101 IQ Enoyl-(Acyl carrier protein) reductase
GEMPKEFO_01346 4.6e-112 argE 3.5.1.18 E Peptidase dimerisation domain
GEMPKEFO_01347 1.9e-174 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GEMPKEFO_01348 1.6e-94 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GEMPKEFO_01349 5e-87 S Alpha beta hydrolase
GEMPKEFO_01350 1.2e-43 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GEMPKEFO_01351 3.6e-140 V MatE
GEMPKEFO_01352 1.4e-156 gmuE 2.7.1.2, 2.7.1.4 GK ROK family
GEMPKEFO_01353 2e-64 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GEMPKEFO_01354 9.6e-97 V ABC transporter
GEMPKEFO_01355 9.6e-132 bacI V MacB-like periplasmic core domain
GEMPKEFO_01356 2.4e-74 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GEMPKEFO_01357 1.4e-25
GEMPKEFO_01358 2.1e-180 yhdP S Transporter associated domain
GEMPKEFO_01359 2e-79 ptp2 3.1.3.48 T Tyrosine phosphatase family
GEMPKEFO_01360 0.0 L Helicase C-terminal domain protein
GEMPKEFO_01361 9.6e-251 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GEMPKEFO_01362 3.7e-212 yfnA E Amino Acid
GEMPKEFO_01363 3.2e-53 zur P Belongs to the Fur family
GEMPKEFO_01365 5e-98
GEMPKEFO_01366 1.4e-14
GEMPKEFO_01367 1.3e-102 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMPKEFO_01368 1.9e-99 glnH ET ABC transporter
GEMPKEFO_01369 1.2e-85 gluC P ABC transporter permease
GEMPKEFO_01370 2.9e-82 glnP P ABC transporter permease
GEMPKEFO_01371 6.4e-182 steT E amino acid
GEMPKEFO_01372 6.5e-21 K Acetyltransferase (GNAT) domain
GEMPKEFO_01373 8.5e-147 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
GEMPKEFO_01374 1.4e-52 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
GEMPKEFO_01375 6.5e-79 K rpiR family
GEMPKEFO_01376 6.2e-166 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GEMPKEFO_01377 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GEMPKEFO_01378 4.5e-109 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GEMPKEFO_01379 1e-100 rplD J Forms part of the polypeptide exit tunnel
GEMPKEFO_01380 2.9e-39 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GEMPKEFO_01381 1.4e-142 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GEMPKEFO_01382 1e-44 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GEMPKEFO_01383 1.5e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GEMPKEFO_01384 5.2e-116 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GEMPKEFO_01385 6.2e-73 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GEMPKEFO_01386 9e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
GEMPKEFO_01387 8e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GEMPKEFO_01388 5.1e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GEMPKEFO_01389 7e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GEMPKEFO_01390 1.3e-91 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GEMPKEFO_01391 4.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GEMPKEFO_01392 2.5e-65 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GEMPKEFO_01393 3.2e-87 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GEMPKEFO_01394 9.6e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GEMPKEFO_01395 1.3e-82 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GEMPKEFO_01396 2.1e-22 rpmD J Ribosomal protein L30
GEMPKEFO_01397 1e-67 rplO J Binds to the 23S rRNA
GEMPKEFO_01398 4.4e-207 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GEMPKEFO_01399 4.4e-107 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GEMPKEFO_01400 4.8e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GEMPKEFO_01401 2.5e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GEMPKEFO_01402 4.4e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GEMPKEFO_01403 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GEMPKEFO_01404 1.3e-155 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GEMPKEFO_01405 4.8e-53 rplQ J Ribosomal protein L17
GEMPKEFO_01406 2.3e-100 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GEMPKEFO_01407 5.2e-111 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GEMPKEFO_01408 2.2e-108 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GEMPKEFO_01409 9.4e-125 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GEMPKEFO_01410 5.5e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GEMPKEFO_01411 1.1e-60 rpsI J Belongs to the universal ribosomal protein uS9 family
GEMPKEFO_01412 6.1e-31
GEMPKEFO_01413 8.9e-246 yjbQ P TrkA C-terminal domain protein
GEMPKEFO_01414 0.0 helD 3.6.4.12 L DNA helicase
GEMPKEFO_01415 1e-67 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
GEMPKEFO_01416 2e-86 devA 3.6.3.25 V ABC transporter, ATP-binding protein
GEMPKEFO_01417 4.5e-101 hrtB V ABC transporter permease
GEMPKEFO_01418 3e-34 ygfC K Bacterial regulatory proteins, tetR family
GEMPKEFO_01419 8.2e-86 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
GEMPKEFO_01420 5.6e-277 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GEMPKEFO_01421 5.5e-45 M LysM domain protein
GEMPKEFO_01422 5.7e-115 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
GEMPKEFO_01423 2.7e-98 sbcC L Putative exonuclease SbcCD, C subunit
GEMPKEFO_01424 7.6e-58 S LexA-binding, inner membrane-associated putative hydrolase
GEMPKEFO_01425 7.2e-53 perR P Belongs to the Fur family
GEMPKEFO_01426 1.1e-207 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GEMPKEFO_01427 3.1e-141 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GEMPKEFO_01428 5.5e-86 S (CBS) domain
GEMPKEFO_01429 8.1e-158 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GEMPKEFO_01430 6.5e-75 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GEMPKEFO_01431 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GEMPKEFO_01432 2.1e-139 yabM S Polysaccharide biosynthesis protein
GEMPKEFO_01433 3.1e-30 yabO J S4 domain protein
GEMPKEFO_01434 1e-21 divIC D Septum formation initiator
GEMPKEFO_01435 2.3e-41 yabR J RNA binding
GEMPKEFO_01436 8e-95 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GEMPKEFO_01437 1.9e-76 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GEMPKEFO_01438 3e-282 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GEMPKEFO_01439 1.1e-132 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GEMPKEFO_01440 1.6e-169 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GEMPKEFO_01441 5.1e-260 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GEMPKEFO_01448 4.8e-190 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GEMPKEFO_01449 1.6e-242 lysP E amino acid
GEMPKEFO_01450 1.2e-68 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
GEMPKEFO_01451 8.6e-272 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
GEMPKEFO_01452 9.2e-14 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GEMPKEFO_01453 3.2e-57 lssY 3.6.1.27 I phosphatidate phosphatase activity
GEMPKEFO_01454 7.6e-83 lysR5 K LysR substrate binding domain
GEMPKEFO_01455 2.2e-119 yxaA S membrane transporter protein
GEMPKEFO_01456 2.6e-32 ywjH S Protein of unknown function (DUF1634)
GEMPKEFO_01457 3.2e-118 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GEMPKEFO_01458 6e-226 pipD E Dipeptidase
GEMPKEFO_01459 1.8e-21 K helix_turn_helix multiple antibiotic resistance protein
GEMPKEFO_01460 1.5e-165 EGP Major facilitator Superfamily
GEMPKEFO_01461 4.7e-81 S L,D-transpeptidase catalytic domain
GEMPKEFO_01462 9.6e-139 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
GEMPKEFO_01463 1.5e-144 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
GEMPKEFO_01464 7.5e-27 ydiI Q Thioesterase superfamily
GEMPKEFO_01465 1.2e-56 yfeJ 6.3.5.2 F glutamine amidotransferase
GEMPKEFO_01466 1.1e-148 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
GEMPKEFO_01467 6.4e-114 degV S EDD domain protein, DegV family
GEMPKEFO_01468 1e-225 cadA P P-type ATPase
GEMPKEFO_01469 2.4e-254 E Amino acid permease
GEMPKEFO_01470 2.7e-83 S Membrane
GEMPKEFO_01471 7e-50 cps3F
GEMPKEFO_01472 2.1e-282 fruA 2.7.1.202 GT Phosphotransferase System
GEMPKEFO_01473 9.1e-151 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GEMPKEFO_01474 4.5e-87 fruR K DeoR C terminal sensor domain
GEMPKEFO_01475 1.4e-219 XK27_08635 S UPF0210 protein
GEMPKEFO_01476 9.2e-27 gcvR T Belongs to the UPF0237 family
GEMPKEFO_01477 1.8e-38
GEMPKEFO_01478 1.3e-77 E GDSL-like Lipase/Acylhydrolase family
GEMPKEFO_01479 9.2e-56 S Protein of unknown function (DUF975)
GEMPKEFO_01480 7.3e-149 lplA 6.3.1.20 H Lipoate-protein ligase
GEMPKEFO_01481 4e-230 lpdA 1.8.1.4 C Dehydrogenase
GEMPKEFO_01482 4.5e-180 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
GEMPKEFO_01483 5.7e-167 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
GEMPKEFO_01484 4.7e-178 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
GEMPKEFO_01485 0.0 3.5.1.28 UW LPXTG-motif cell wall anchor domain protein
GEMPKEFO_01487 3.2e-58 S Protein of unknown function (DUF4256)
GEMPKEFO_01488 2.5e-128 metQ M Belongs to the nlpA lipoprotein family
GEMPKEFO_01489 2.4e-31 metI U ABC transporter permease
GEMPKEFO_01490 2.1e-151 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GEMPKEFO_01492 1.7e-264 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
GEMPKEFO_01493 1.3e-172 npr 1.11.1.1 S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
GEMPKEFO_01494 2.3e-106 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
GEMPKEFO_01495 3.9e-84 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
GEMPKEFO_01496 3e-84 drgA C nitroreductase
GEMPKEFO_01497 6.7e-135 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GEMPKEFO_01498 1.3e-69 metI P ABC transporter permease
GEMPKEFO_01499 2.6e-149 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GEMPKEFO_01500 1.8e-108 metQ1 P Belongs to the nlpA lipoprotein family
GEMPKEFO_01501 3.5e-144 E methionine synthase, vitamin-B12 independent
GEMPKEFO_01502 1.4e-45 yphJ 4.1.1.44 S decarboxylase
GEMPKEFO_01503 1.1e-55 yphH S Cupin domain
GEMPKEFO_01504 4.8e-47 C Flavodoxin
GEMPKEFO_01505 3.6e-56 S CAAX protease self-immunity
GEMPKEFO_01506 1.2e-102 pgm3 G phosphoglycerate mutase
GEMPKEFO_01507 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GEMPKEFO_01508 1.4e-224 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GEMPKEFO_01509 4.1e-54 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GEMPKEFO_01510 4.4e-67 M ErfK YbiS YcfS YnhG
GEMPKEFO_01511 5.2e-107 XK27_08845 S ABC transporter, ATP-binding protein
GEMPKEFO_01512 4.3e-113 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
GEMPKEFO_01513 3.5e-132 ABC-SBP S ABC transporter
GEMPKEFO_01514 1.3e-159 potD P ABC transporter
GEMPKEFO_01515 4.5e-104 potC U Binding-protein-dependent transport system inner membrane component
GEMPKEFO_01516 1.5e-120 potB P ABC transporter permease
GEMPKEFO_01517 6.3e-167 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GEMPKEFO_01518 7.4e-100 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GEMPKEFO_01519 1.6e-260 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
GEMPKEFO_01520 5.2e-236 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GEMPKEFO_01521 3.9e-13 S Enterocin A Immunity
GEMPKEFO_01522 7.5e-10 pspC KT PspC domain
GEMPKEFO_01523 1.5e-15 S Putative adhesin
GEMPKEFO_01524 7.1e-19 XK27_06920 S Protein of unknown function (DUF1700)
GEMPKEFO_01525 8.1e-38 K transcriptional regulator PadR family
GEMPKEFO_01526 5.6e-46 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
GEMPKEFO_01527 4.1e-75 ung2 3.2.2.27 L Uracil-DNA glycosylase
GEMPKEFO_01528 8.4e-165 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GEMPKEFO_01529 5.2e-129 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GEMPKEFO_01530 9.2e-71 mltD CBM50 M NlpC P60 family protein
GEMPKEFO_01531 2.3e-84 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMPKEFO_01533 4.3e-16 S Protein of unknown function (DUF805)
GEMPKEFO_01534 3.6e-71 L PFAM transposase IS200-family protein
GEMPKEFO_01535 1.8e-52 manO S Domain of unknown function (DUF956)
GEMPKEFO_01536 8e-147 manN G system, mannose fructose sorbose family IID component
GEMPKEFO_01537 6.4e-116 manY G PTS system sorbose-specific iic component
GEMPKEFO_01538 9e-152 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
GEMPKEFO_01539 2.4e-80 rbsB G sugar-binding domain protein
GEMPKEFO_01540 2.3e-99 baeS T Histidine kinase
GEMPKEFO_01541 3.9e-79 baeR K Bacterial regulatory proteins, luxR family
GEMPKEFO_01542 1.4e-120 G Bacterial extracellular solute-binding protein
GEMPKEFO_01543 1.7e-69 S Protein of unknown function (DUF554)
GEMPKEFO_01544 1.8e-39 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GEMPKEFO_01545 7.1e-32 merR K MerR HTH family regulatory protein
GEMPKEFO_01546 2.1e-197 lmrB EGP Major facilitator Superfamily
GEMPKEFO_01547 5.3e-34 S Domain of unknown function (DUF4811)
GEMPKEFO_01548 1.7e-31 S CAAX protease self-immunity
GEMPKEFO_01549 7.7e-61 yceE S haloacid dehalogenase-like hydrolase
GEMPKEFO_01550 7.6e-74 glcR K DeoR C terminal sensor domain
GEMPKEFO_01551 3.7e-94 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GEMPKEFO_01552 1.3e-183 lmrB EGP Major facilitator Superfamily
GEMPKEFO_01553 2.1e-54 bioY S BioY family
GEMPKEFO_01554 1.4e-94 S Predicted membrane protein (DUF2207)
GEMPKEFO_01555 1.4e-19
GEMPKEFO_01556 4.4e-37 M Glycosyltransferase group 2 family protein
GEMPKEFO_01557 7.4e-54 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
GEMPKEFO_01558 2.8e-58 ktrA P TrkA-N domain
GEMPKEFO_01559 1.6e-114 ntpJ P Potassium uptake protein
GEMPKEFO_01560 6.7e-90 L PFAM Integrase catalytic region
GEMPKEFO_01561 9.1e-31 L Helix-turn-helix domain
GEMPKEFO_01562 1.2e-183 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
GEMPKEFO_01563 3.1e-281 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
GEMPKEFO_01564 1.1e-217 scrB 3.2.1.26 GH32 G invertase
GEMPKEFO_01565 3.9e-147 scrR K helix_turn _helix lactose operon repressor
GEMPKEFO_01567 1.4e-06
GEMPKEFO_01568 4.4e-262 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GEMPKEFO_01569 1.7e-54 rplI J Binds to the 23S rRNA
GEMPKEFO_01570 1.2e-205 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GEMPKEFO_01571 4e-64 C FMN binding
GEMPKEFO_01572 7.4e-231 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GEMPKEFO_01574 3.9e-157 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GEMPKEFO_01575 1.2e-59 ykhA 3.1.2.20 I Thioesterase superfamily
GEMPKEFO_01576 7.9e-12 V CAAX protease self-immunity
GEMPKEFO_01577 1.6e-81 S Belongs to the UPF0246 family
GEMPKEFO_01578 4.6e-100 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
GEMPKEFO_01579 1.6e-128 yxjG 2.1.1.14 E Cobalamin-independent synthase, Catalytic domain
GEMPKEFO_01580 3.7e-74 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
GEMPKEFO_01581 3.5e-196 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
GEMPKEFO_01582 2.2e-161 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GEMPKEFO_01583 2.2e-56 3.1.3.48 K Transcriptional regulator
GEMPKEFO_01584 6.9e-198 1.3.5.4 C FMN_bind
GEMPKEFO_01585 1.1e-116 pepL 3.4.11.5 E Releases the N-terminal proline from various substrates
GEMPKEFO_01586 2.6e-201 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
GEMPKEFO_01587 8.6e-141 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GEMPKEFO_01588 8.7e-81 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
GEMPKEFO_01589 2e-64 2.7.1.191 G PTS system sorbose subfamily IIB component
GEMPKEFO_01590 4.4e-101 G PTS system sorbose-specific iic component
GEMPKEFO_01591 3.2e-123 G PTS system mannose/fructose/sorbose family IID component
GEMPKEFO_01592 7.5e-39 2.7.1.191 G PTS system fructose IIA component
GEMPKEFO_01593 4.2e-231 malL 3.2.1.10 GH13 G Psort location Cytoplasmic, score
GEMPKEFO_01594 3.7e-113 lacI3 K helix_turn _helix lactose operon repressor
GEMPKEFO_01595 6.2e-135 glpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GEMPKEFO_01596 6.1e-75 hchA S intracellular protease amidase
GEMPKEFO_01597 3.1e-22 K transcriptional regulator
GEMPKEFO_01598 5e-116 KT Putative sugar diacid recognition
GEMPKEFO_01599 1.8e-181 EG GntP family permease
GEMPKEFO_01600 3.7e-149 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GEMPKEFO_01601 2.6e-43 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GEMPKEFO_01602 3.3e-21 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GEMPKEFO_01603 1.2e-250 ctpA 3.6.3.54 P P-type ATPase
GEMPKEFO_01604 5e-66 pgm3 G phosphoglycerate mutase family
GEMPKEFO_01605 1.5e-56 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
GEMPKEFO_01606 1.1e-85 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GEMPKEFO_01607 1.6e-218 yifK E Amino acid permease
GEMPKEFO_01608 4e-202 oppA E ABC transporter, substratebinding protein
GEMPKEFO_01609 7.9e-142 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
GEMPKEFO_01610 4.4e-170 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
GEMPKEFO_01611 1.3e-180 oppD P Belongs to the ABC transporter superfamily
GEMPKEFO_01612 3.7e-155 oppF P Belongs to the ABC transporter superfamily
GEMPKEFO_01613 5.4e-16 psiE S Phosphate-starvation-inducible E
GEMPKEFO_01614 1.7e-209 mmuP E amino acid
GEMPKEFO_01615 1.1e-114 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
GEMPKEFO_01616 4.5e-39 K LytTr DNA-binding domain
GEMPKEFO_01617 2.5e-16 S Protein of unknown function (DUF3021)
GEMPKEFO_01618 1.2e-150 yfeX P Peroxidase
GEMPKEFO_01619 1.4e-30 tetR K Transcriptional regulator C-terminal region
GEMPKEFO_01620 9.2e-47 S Short repeat of unknown function (DUF308)
GEMPKEFO_01621 1.1e-52 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GEMPKEFO_01622 6.2e-163 oxlT P Major Facilitator Superfamily
GEMPKEFO_01623 2e-67 ybbL S ABC transporter
GEMPKEFO_01624 1.9e-101 ybbM S Uncharacterised protein family (UPF0014)
GEMPKEFO_01625 9.3e-43 ytcD K HxlR-like helix-turn-helix
GEMPKEFO_01626 2.4e-121 ytbE S reductase
GEMPKEFO_01627 1.1e-25 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GEMPKEFO_01628 2.2e-216 L Probable transposase
GEMPKEFO_01629 1.5e-34 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GEMPKEFO_01631 2.4e-32 tetR K transcriptional regulator
GEMPKEFO_01632 6.4e-96 XK27_06785 V ABC transporter, ATP-binding protein
GEMPKEFO_01633 5e-255 XK27_06780 V ABC transporter permease
GEMPKEFO_01635 5.1e-42 wecD K Acetyltransferase GNAT Family
GEMPKEFO_01636 6.7e-47 hmpT S ECF-type riboflavin transporter, S component
GEMPKEFO_01637 7.8e-72 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GEMPKEFO_01638 2.1e-07 S SdpI/YhfL protein family
GEMPKEFO_01639 2.2e-111 dat 2.6.1.21 EH PFAM aminotransferase, class IV
GEMPKEFO_01640 8.1e-287 pepO 3.4.24.71 O Peptidase family M13
GEMPKEFO_01641 5.9e-44 thiT S Thiamine transporter protein (Thia_YuaJ)
GEMPKEFO_01642 5.3e-54 K Transcriptional regulator C-terminal region
GEMPKEFO_01643 2.1e-55 jag S R3H domain protein
GEMPKEFO_01644 1.5e-56 ohrR K helix_turn_helix multiple antibiotic resistance protein
GEMPKEFO_01645 2.6e-31 azlD S Branched-chain amino acid transport protein (AzlD)
GEMPKEFO_01646 5.1e-77 azlC E branched-chain amino acid
GEMPKEFO_01647 9.3e-59 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
GEMPKEFO_01648 7.2e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GEMPKEFO_01649 4.7e-294 lai 4.2.1.53 S Myosin-crossreactive antigen
GEMPKEFO_01650 3.5e-33 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
GEMPKEFO_01651 2.4e-193 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
GEMPKEFO_01652 4.1e-75 XK27_02070 S Nitroreductase family
GEMPKEFO_01653 1.1e-110 endA F DNA RNA non-specific endonuclease
GEMPKEFO_01655 8.5e-209 brnQ U Component of the transport system for branched-chain amino acids
GEMPKEFO_01656 1.7e-61 K Bacterial regulatory proteins, tetR family
GEMPKEFO_01657 1.9e-114 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
GEMPKEFO_01658 7.6e-151 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
GEMPKEFO_01659 1.6e-68 dhaL 2.7.1.121 S Dak2
GEMPKEFO_01660 3.1e-49 dhaM 2.7.1.121 S PTS system fructose IIA component
GEMPKEFO_01661 8.4e-104 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GEMPKEFO_01662 2.4e-175 yjcE P Sodium proton antiporter
GEMPKEFO_01663 1.4e-210 mtlR K Mga helix-turn-helix domain
GEMPKEFO_01664 5.9e-303 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GEMPKEFO_01665 6.1e-188 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
GEMPKEFO_01666 5e-37 M Glycosyl hydrolases family 25
GEMPKEFO_01668 4.5e-102 tcyB E ABC transporter
GEMPKEFO_01669 4.1e-101 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMPKEFO_01670 5.7e-96 tcyA ET Belongs to the bacterial solute-binding protein 3 family
GEMPKEFO_01671 5.5e-39 K Transcriptional regulator
GEMPKEFO_01672 1.7e-107 terC P Integral membrane protein TerC family
GEMPKEFO_01673 1.1e-261 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
GEMPKEFO_01674 2.8e-65 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMPKEFO_01675 6.4e-186 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
GEMPKEFO_01676 1.1e-41 gntR1 K Transcriptional regulator, GntR family
GEMPKEFO_01677 6.1e-96 V ABC transporter, ATP-binding protein
GEMPKEFO_01678 2.5e-08
GEMPKEFO_01679 1.1e-39 ybjQ S Belongs to the UPF0145 family
GEMPKEFO_01680 3.6e-158 manA 5.3.1.8 G mannose-6-phosphate isomerase
GEMPKEFO_01681 6.6e-97 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GEMPKEFO_01682 1e-157 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GEMPKEFO_01683 1.8e-141 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GEMPKEFO_01684 1.1e-33
GEMPKEFO_01685 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GEMPKEFO_01686 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GEMPKEFO_01687 8e-64 srtA 3.4.22.70 M sortase family
GEMPKEFO_01689 1.8e-72 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
GEMPKEFO_01690 7.9e-62 yvdD 3.2.2.10 S Possible lysine decarboxylase
GEMPKEFO_01691 3.4e-208 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GEMPKEFO_01692 4.1e-179 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GEMPKEFO_01693 3.8e-65 S Uncharacterized protein conserved in bacteria (DUF2263)
GEMPKEFO_01694 1.2e-180 pbuG S permease
GEMPKEFO_01696 1.6e-79 S Cell surface protein
GEMPKEFO_01698 1.2e-255 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
GEMPKEFO_01699 2.2e-61
GEMPKEFO_01700 1.4e-40 rpmE2 J Ribosomal protein L31
GEMPKEFO_01701 5.3e-189 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GEMPKEFO_01702 1e-200 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GEMPKEFO_01704 1.6e-288 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GEMPKEFO_01705 1e-41 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GEMPKEFO_01706 6.3e-33 ywiB S Domain of unknown function (DUF1934)
GEMPKEFO_01707 9.8e-86 yfeJ 6.3.5.2 F glutamine amidotransferase
GEMPKEFO_01708 8.6e-206 ywfO S HD domain protein
GEMPKEFO_01709 4.4e-88 S hydrolase
GEMPKEFO_01710 7.7e-105 ydcZ S Putative inner membrane exporter, YdcZ
GEMPKEFO_01711 2.2e-27
GEMPKEFO_01712 7e-73
GEMPKEFO_01714 5.4e-39 L COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
GEMPKEFO_01715 1.9e-21
GEMPKEFO_01716 6.7e-56 spoVK O ATPase family associated with various cellular activities (AAA)
GEMPKEFO_01718 1.7e-86 S overlaps another CDS with the same product name
GEMPKEFO_01719 1e-124 S overlaps another CDS with the same product name
GEMPKEFO_01720 2.2e-99 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GEMPKEFO_01721 3.9e-63 bCE_4747 S Beta-lactamase superfamily domain
GEMPKEFO_01722 3.9e-290 ybiT S ABC transporter, ATP-binding protein
GEMPKEFO_01723 5.1e-78 2.4.2.3 F Phosphorylase superfamily
GEMPKEFO_01724 1.7e-24
GEMPKEFO_01725 1.2e-112 dkg S reductase
GEMPKEFO_01727 1.5e-20 rimL 1.1.1.25 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GEMPKEFO_01728 2.3e-168 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GEMPKEFO_01729 1.7e-193 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GEMPKEFO_01730 1.9e-47 EGP Transmembrane secretion effector
GEMPKEFO_01731 5.2e-137 purR 2.4.2.7 F pur operon repressor
GEMPKEFO_01732 1.1e-52 adhR K helix_turn_helix, mercury resistance
GEMPKEFO_01733 3.9e-185 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GEMPKEFO_01734 1.4e-99 2.4.1.9 GH68 M MucBP domain
GEMPKEFO_01736 4.3e-104 pfoS S Phosphotransferase system, EIIC
GEMPKEFO_01737 4.9e-126 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GEMPKEFO_01738 3.4e-150 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
GEMPKEFO_01739 6.5e-197 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GEMPKEFO_01740 2.2e-201 argH 4.3.2.1 E argininosuccinate lyase
GEMPKEFO_01741 1.6e-156 amtB P ammonium transporter
GEMPKEFO_01742 1.8e-116 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GEMPKEFO_01743 6.6e-46 argR K Regulates arginine biosynthesis genes
GEMPKEFO_01744 3.6e-133 arcT 2.6.1.1 E Cys/Met metabolism PLP-dependent enzyme
GEMPKEFO_01745 2.9e-90 S Alpha/beta hydrolase of unknown function (DUF915)
GEMPKEFO_01746 2.7e-22 veg S Biofilm formation stimulator VEG
GEMPKEFO_01747 3.7e-133 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GEMPKEFO_01748 3.4e-87 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GEMPKEFO_01749 1e-102 tatD L hydrolase, TatD family
GEMPKEFO_01750 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GEMPKEFO_01751 5.1e-128
GEMPKEFO_01752 2.3e-152 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
GEMPKEFO_01753 1.9e-43 VPA1512 ET Bacterial extracellular solute-binding proteins, family 3
GEMPKEFO_01754 1.8e-31 K Transcriptional regulator
GEMPKEFO_01755 2.7e-104 ybhR V ABC transporter
GEMPKEFO_01756 4.2e-82 ybhF_2 V abc transporter atp-binding protein
GEMPKEFO_01757 2.1e-102 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GEMPKEFO_01758 2.3e-171 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GEMPKEFO_01759 9.3e-128 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GEMPKEFO_01760 8.8e-272 helD 3.6.4.12 L DNA helicase
GEMPKEFO_01762 1.3e-114 htpX O Belongs to the peptidase M48B family
GEMPKEFO_01763 8.7e-72 lemA S LemA family
GEMPKEFO_01764 1.4e-54 L phosphatase homologous to the C-terminal domain of histone macroH2A1
GEMPKEFO_01765 1.1e-45 yjcF K protein acetylation
GEMPKEFO_01767 7.4e-253 yfiC V ABC transporter
GEMPKEFO_01768 8.9e-224 lmrA V ABC transporter, ATP-binding protein
GEMPKEFO_01769 5.8e-35 K Bacterial regulatory proteins, tetR family
GEMPKEFO_01770 5.6e-246 yhcA V ABC transporter, ATP-binding protein
GEMPKEFO_01771 7e-224 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GEMPKEFO_01772 8.6e-146 G Transporter, major facilitator family protein
GEMPKEFO_01773 1.7e-90 lacX 5.1.3.3 G Aldose 1-epimerase
GEMPKEFO_01774 1.7e-141 hpk31 2.7.13.3 T Histidine kinase
GEMPKEFO_01775 2.5e-113 K response regulator
GEMPKEFO_01776 1.2e-89 patB 4.4.1.8 E Aminotransferase, class I
GEMPKEFO_01777 3.4e-92 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
GEMPKEFO_01778 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GEMPKEFO_01779 1.3e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GEMPKEFO_01780 6.1e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GEMPKEFO_01781 4.3e-23 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
GEMPKEFO_01782 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GEMPKEFO_01783 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GEMPKEFO_01784 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GEMPKEFO_01785 1.6e-55 ctsR K Belongs to the CtsR family
GEMPKEFO_01787 1.1e-119 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GEMPKEFO_01788 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GEMPKEFO_01789 3.7e-159 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GEMPKEFO_01790 1.4e-186 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GEMPKEFO_01791 2.9e-131 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GEMPKEFO_01797 1.9e-168 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
GEMPKEFO_01798 1.1e-209 glnP P ABC transporter
GEMPKEFO_01800 1.1e-59 uspA T Universal stress protein family
GEMPKEFO_01801 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
GEMPKEFO_01802 1.1e-25
GEMPKEFO_01803 2.9e-201 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
GEMPKEFO_01804 1e-109 puuD S peptidase C26
GEMPKEFO_01805 4e-83 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GEMPKEFO_01806 6e-152 lsa S ABC transporter
GEMPKEFO_01807 5.5e-149 mepA V MATE efflux family protein
GEMPKEFO_01810 1.7e-77 asp1 S Accessory Sec system protein Asp1
GEMPKEFO_01811 7.1e-66 secY2 U SecY translocase
GEMPKEFO_01812 8.3e-138 S interspecies interaction between organisms
GEMPKEFO_01813 7.2e-208 G glycerol-3-phosphate transporter
GEMPKEFO_01814 1.5e-72 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GEMPKEFO_01815 3.7e-145 htrA 3.4.21.107 O serine protease
GEMPKEFO_01816 1.3e-116 vicX 3.1.26.11 S domain protein
GEMPKEFO_01817 5.1e-16 yyaQ S YjbR
GEMPKEFO_01818 3.6e-79 yycI S YycH protein
GEMPKEFO_01819 2.7e-103 yycH S YycH protein
GEMPKEFO_01820 1.1e-272 vicK 2.7.13.3 T Histidine kinase
GEMPKEFO_01821 9e-114 K response regulator
GEMPKEFO_01822 1.8e-120 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GEMPKEFO_01823 4.7e-106 yxeH S hydrolase
GEMPKEFO_01825 4.3e-96 S Domain of unknown function DUF87
GEMPKEFO_01827 1.1e-229 V ABC transporter transmembrane region
GEMPKEFO_01828 2e-215 XK27_09600 V ABC transporter, ATP-binding protein
GEMPKEFO_01829 1.2e-31 K Transcriptional regulator, MarR family
GEMPKEFO_01830 8.3e-172 S Putative peptidoglycan binding domain
GEMPKEFO_01832 4e-23 relB L RelB antitoxin
GEMPKEFO_01833 8.4e-62 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GEMPKEFO_01834 1.1e-139 gldA 1.1.1.6 C Iron-containing alcohol dehydrogenase
GEMPKEFO_01835 4.4e-179 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
GEMPKEFO_01836 1.5e-108 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GEMPKEFO_01837 1.8e-222 pepF E Oligopeptidase F
GEMPKEFO_01838 2.2e-96 yicL EG EamA-like transporter family
GEMPKEFO_01839 2.4e-69 2.3.1.178 J Acetyltransferase (GNAT) domain
GEMPKEFO_01840 4.4e-170 yjjP S Putative threonine/serine exporter
GEMPKEFO_01841 2.8e-109 glcU U sugar transport
GEMPKEFO_01842 3.8e-14 yobS K transcriptional regulator
GEMPKEFO_01843 1.1e-151 mdtG EGP Major facilitator Superfamily
GEMPKEFO_01844 1.3e-98 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
GEMPKEFO_01845 2.2e-224 yxbA 6.3.1.12 S ATP-grasp enzyme
GEMPKEFO_01846 1.5e-230 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GEMPKEFO_01847 3.6e-17 yneR
GEMPKEFO_01848 7.4e-248 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GEMPKEFO_01849 1.6e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GEMPKEFO_01850 3.3e-12 yiiE S Protein of unknown function (DUF1211)
GEMPKEFO_01851 3.7e-37 yiiE S Protein of unknown function (DUF1211)
GEMPKEFO_01852 0.0 asnB 6.3.5.4 E Asparagine synthase
GEMPKEFO_01853 7.4e-64 D peptidase
GEMPKEFO_01854 5.6e-117 S Glycosyl transferase family 2
GEMPKEFO_01855 2.5e-110 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
GEMPKEFO_01856 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GEMPKEFO_01857 3.3e-63 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GEMPKEFO_01858 6.2e-45 rpsF J Binds together with S18 to 16S ribosomal RNA
GEMPKEFO_01859 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GEMPKEFO_01860 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GEMPKEFO_01861 8.4e-154 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GEMPKEFO_01862 9e-20 yaaA S S4 domain protein YaaA
GEMPKEFO_01863 6.6e-159 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GEMPKEFO_01864 2.1e-204 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GEMPKEFO_01865 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GEMPKEFO_01866 2.2e-49 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GEMPKEFO_01867 5.3e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GEMPKEFO_01868 1.1e-199 nupG F Nucleoside
GEMPKEFO_01869 1.5e-122 MA20_14895 S Conserved hypothetical protein 698
GEMPKEFO_01870 3.8e-53 K LysR substrate binding domain
GEMPKEFO_01871 1.8e-07
GEMPKEFO_01872 6e-66 yxkH G Polysaccharide deacetylase
GEMPKEFO_01873 9e-30 yqkB S Belongs to the HesB IscA family
GEMPKEFO_01877 0.0 pacL 3.6.3.8 P P-type ATPase
GEMPKEFO_01878 1.4e-109 3.1.4.46 C phosphodiesterase
GEMPKEFO_01879 1.2e-126 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GEMPKEFO_01880 6.2e-102 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GEMPKEFO_01881 1.7e-82 noc K Belongs to the ParB family
GEMPKEFO_01882 6.5e-118 soj D Sporulation initiation inhibitor
GEMPKEFO_01883 6.3e-109 spo0J K Belongs to the ParB family
GEMPKEFO_01884 1.8e-24 yyzM S Bacterial protein of unknown function (DUF951)
GEMPKEFO_01885 2.4e-190 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GEMPKEFO_01886 1.4e-53 XK27_01040 S Protein of unknown function (DUF1129)
GEMPKEFO_01887 2e-38
GEMPKEFO_01888 1.3e-103 psaA P Belongs to the bacterial solute-binding protein 9 family
GEMPKEFO_01889 1e-98 fhuC P ABC transporter
GEMPKEFO_01890 2.5e-96 znuB U ABC 3 transport family
GEMPKEFO_01891 1.5e-55 S ECF transporter, substrate-specific component
GEMPKEFO_01892 2.3e-102 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GEMPKEFO_01893 9.8e-90 S NADPH-dependent FMN reductase
GEMPKEFO_01894 1.2e-27 yraB K transcriptional regulator
GEMPKEFO_01895 9e-68 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GEMPKEFO_01897 2.9e-153 EGP Major facilitator Superfamily
GEMPKEFO_01898 2.9e-58 S Haloacid dehalogenase-like hydrolase
GEMPKEFO_01899 9.1e-89 yvyE 3.4.13.9 S YigZ family
GEMPKEFO_01900 3e-39 S CAAX protease self-immunity
GEMPKEFO_01901 4.9e-116 cps1D M Domain of unknown function (DUF4422)
GEMPKEFO_01902 1.1e-61 S Glycosyltransferase like family 2
GEMPKEFO_01903 4.6e-89 S Psort location CytoplasmicMembrane, score
GEMPKEFO_01904 5.4e-99 waaB GT4 M Glycosyl transferases group 1
GEMPKEFO_01905 4.5e-84 S Psort location CytoplasmicMembrane, score
GEMPKEFO_01906 1.7e-72 S Glycosyltransferase like family 2
GEMPKEFO_01907 4.2e-145 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GEMPKEFO_01908 4.2e-101 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
GEMPKEFO_01909 5.6e-165 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GEMPKEFO_01910 3.4e-128 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GEMPKEFO_01911 1.1e-26 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
GEMPKEFO_01912 2.8e-71 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
GEMPKEFO_01913 1.7e-84 wbbL S Glycosyl transferase family 2
GEMPKEFO_01914 2e-142 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GEMPKEFO_01915 2.2e-67 rgpB M Glycosyl transferase family 2
GEMPKEFO_01916 5e-43 cps M Glycosyltransferase family 92
GEMPKEFO_01917 3.3e-99 S Glycosyltransferase WbsX
GEMPKEFO_01918 3.1e-19 2.3.1.18 S Psort location Cytoplasmic, score 9.26
GEMPKEFO_01919 1.1e-31 M Glycosyl transferases group 1
GEMPKEFO_01920 5.1e-15 wzy S EpsG family
GEMPKEFO_01921 1e-66 ppm1 GT2 M Glycosyl transferase family 2
GEMPKEFO_01922 2.2e-90 tuaB S Polysaccharide biosynthesis protein
GEMPKEFO_01923 1.2e-20 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
GEMPKEFO_01924 1.3e-45 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
GEMPKEFO_01926 3.8e-215 ugd 1.1.1.22 M UDP binding domain
GEMPKEFO_01927 2.6e-77 epsB M biosynthesis protein
GEMPKEFO_01928 2.7e-81 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GEMPKEFO_01929 1.6e-111 ywqE 3.1.3.48 GM PHP domain protein
GEMPKEFO_01930 1.8e-125 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GEMPKEFO_01931 9.1e-92 rfbP M Bacterial sugar transferase
GEMPKEFO_01932 8.1e-67 cps3F
GEMPKEFO_01933 1.1e-93 M transferase activity, transferring glycosyl groups
GEMPKEFO_01934 1.3e-109 M Core-2/I-Branching enzyme
GEMPKEFO_01935 2.8e-95 waaB GT4 M Glycosyl transferases group 1
GEMPKEFO_01936 9.1e-112 S Psort location CytoplasmicMembrane, score
GEMPKEFO_01937 2.8e-194 glf 5.4.99.9 M UDP-galactopyranose mutase
GEMPKEFO_01938 7.7e-189 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
GEMPKEFO_01939 6.2e-70 rny D Peptidase family M23
GEMPKEFO_01941 2e-137 tetA EGP Major facilitator Superfamily
GEMPKEFO_01946 1.1e-59 3.2.1.18 GH33 M Rib/alpha-like repeat
GEMPKEFO_01947 1.2e-44 K Copper transport repressor CopY TcrY
GEMPKEFO_01948 6.1e-60 T Belongs to the universal stress protein A family
GEMPKEFO_01949 7.6e-41 K Bacterial regulatory proteins, tetR family
GEMPKEFO_01950 1.1e-56 K transcriptional
GEMPKEFO_01951 6.2e-72 mleR K LysR family
GEMPKEFO_01952 3.7e-248 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
GEMPKEFO_01953 2.2e-126 mleP S Sodium Bile acid symporter family
GEMPKEFO_01954 3.2e-64 S ECF transporter, substrate-specific component
GEMPKEFO_01955 6.3e-61 acmC 3.2.1.96 NU mannosyl-glycoprotein
GEMPKEFO_01956 9.7e-74 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GEMPKEFO_01957 2.2e-193 pbuX F xanthine permease
GEMPKEFO_01958 3.1e-34 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GEMPKEFO_01959 4.3e-257 topB 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
GEMPKEFO_01960 2.5e-94 yjbM 2.7.6.5 S RelA SpoT domain protein
GEMPKEFO_01961 7.6e-117 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GEMPKEFO_01962 6.9e-95 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
GEMPKEFO_01963 1.9e-176 mgtE P Acts as a magnesium transporter
GEMPKEFO_01965 1.7e-40
GEMPKEFO_01966 1.3e-34 K GNAT family
GEMPKEFO_01967 2.2e-209 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
GEMPKEFO_01968 5.5e-221 gdhA 1.4.1.4 E Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
GEMPKEFO_01969 3.8e-42 O ADP-ribosylglycohydrolase
GEMPKEFO_01970 1.4e-219 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
GEMPKEFO_01971 2.1e-266 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GEMPKEFO_01972 4.2e-161 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GEMPKEFO_01973 6.9e-119 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
GEMPKEFO_01974 4.7e-194 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
GEMPKEFO_01975 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GEMPKEFO_01976 9.5e-176 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
GEMPKEFO_01977 3.4e-24 S Domain of unknown function (DUF4828)
GEMPKEFO_01978 5.4e-128 mocA S Oxidoreductase
GEMPKEFO_01979 1.5e-159 yfmL L DEAD DEAH box helicase
GEMPKEFO_01980 1.5e-20 S Domain of unknown function (DUF3284)
GEMPKEFO_01982 3.9e-279 kup P Transport of potassium into the cell
GEMPKEFO_01983 9.4e-101 malR K Transcriptional regulator, LacI family
GEMPKEFO_01984 4.3e-213 malT G Transporter, major facilitator family protein
GEMPKEFO_01985 7.7e-79 galM 5.1.3.3 G Aldose 1-epimerase
GEMPKEFO_01986 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GEMPKEFO_01987 4.9e-85 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
GEMPKEFO_01988 3e-266 E Amino acid permease
GEMPKEFO_01989 3.5e-182 pepS E Thermophilic metalloprotease (M29)
GEMPKEFO_01990 2.4e-169 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GEMPKEFO_01991 2.4e-70 K Sugar-specific transcriptional regulator TrmB
GEMPKEFO_01992 1.7e-122 S Sulfite exporter TauE/SafE
GEMPKEFO_01993 5.2e-120 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
GEMPKEFO_01994 0.0 S Bacterial membrane protein YfhO
GEMPKEFO_01995 8.7e-53 gtcA S Teichoic acid glycosylation protein
GEMPKEFO_01996 5.1e-54 fld C Flavodoxin
GEMPKEFO_01997 1.2e-143 map 3.4.11.18 E Methionine Aminopeptidase
GEMPKEFO_01998 1.2e-152 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GEMPKEFO_01999 6.2e-12 mltD CBM50 M Lysin motif
GEMPKEFO_02000 3.8e-93 yihY S Belongs to the UPF0761 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)