ORF_ID e_value Gene_name EC_number CAZy COGs Description
LDCHJDGF_00001 2.3e-23
LDCHJDGF_00002 2e-146 ptp3 3.1.3.48 T Tyrosine phosphatase family
LDCHJDGF_00003 4.3e-46
LDCHJDGF_00004 5.6e-11
LDCHJDGF_00005 0.0 V ABC transporter transmembrane region
LDCHJDGF_00006 0.0 V ABC transporter, ATP-binding protein
LDCHJDGF_00007 3.2e-98 K MarR family
LDCHJDGF_00008 3.7e-102 S NADPH-dependent FMN reductase
LDCHJDGF_00009 1.7e-98 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
LDCHJDGF_00012 5.8e-49
LDCHJDGF_00013 2.1e-204
LDCHJDGF_00014 0.0 cas3 L CRISPR-associated helicase Cas3
LDCHJDGF_00015 0.0
LDCHJDGF_00016 1.2e-222 S CRISPR-associated protein GSU0053 (Cas_GSU0053)
LDCHJDGF_00017 9.4e-17 cas2 L CRISPR associated protein Cas2
LDCHJDGF_00018 0.0 cas4 3.1.12.1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LDCHJDGF_00019 6.5e-256 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
LDCHJDGF_00020 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
LDCHJDGF_00021 9.4e-101 yiiE S Protein of unknown function (DUF1211)
LDCHJDGF_00022 3.5e-62 yiiE S Protein of unknown function (DUF1304)
LDCHJDGF_00023 5.4e-121
LDCHJDGF_00024 2e-148 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDCHJDGF_00025 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
LDCHJDGF_00026 2.7e-233 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDCHJDGF_00027 6.8e-45 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LDCHJDGF_00028 5.9e-191 S Endonuclease/Exonuclease/phosphatase family
LDCHJDGF_00030 1.9e-127 tmp1 S Domain of unknown function (DUF4391)
LDCHJDGF_00031 1.5e-172 aspB E Aminotransferase class-V
LDCHJDGF_00032 5.6e-100 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
LDCHJDGF_00033 9e-300 S zinc finger
LDCHJDGF_00034 1.9e-269 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
LDCHJDGF_00035 2.7e-125 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LDCHJDGF_00036 7.2e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LDCHJDGF_00037 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
LDCHJDGF_00038 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LDCHJDGF_00039 5.7e-166 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LDCHJDGF_00040 1.7e-134 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LDCHJDGF_00041 1e-187 G Major Facilitator Superfamily
LDCHJDGF_00042 1.5e-146 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LDCHJDGF_00043 3.1e-161 S Patatin-like phospholipase
LDCHJDGF_00044 9.7e-137 XK27_08050 O prohibitin homologues
LDCHJDGF_00045 1.6e-163 cjaA ET Bacterial periplasmic substrate-binding proteins
LDCHJDGF_00046 1.8e-159 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
LDCHJDGF_00047 2.7e-123 glnP E Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00048 4.1e-113 papP E Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00049 1.2e-232 mtnE 2.6.1.83 E Aminotransferase class I and II
LDCHJDGF_00050 1.1e-110 metI P Psort location CytoplasmicMembrane, score 9.99
LDCHJDGF_00051 8.3e-221 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LDCHJDGF_00052 1e-162 metQ M NLPA lipoprotein
LDCHJDGF_00053 6.4e-198 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LDCHJDGF_00054 6e-128 K acetyltransferase
LDCHJDGF_00055 1.5e-103 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
LDCHJDGF_00056 2e-108 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
LDCHJDGF_00057 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LDCHJDGF_00058 6.4e-184 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LDCHJDGF_00059 2.2e-145 4.1.1.44 S Carboxymuconolactone decarboxylase family
LDCHJDGF_00060 1.9e-195 cat P Cation efflux family
LDCHJDGF_00061 4.1e-300 ybiT S ABC transporter
LDCHJDGF_00062 2.7e-122 S Phospholipase/Carboxylesterase
LDCHJDGF_00063 2.1e-99 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
LDCHJDGF_00064 9.8e-180 wcoO
LDCHJDGF_00065 7e-32 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LDCHJDGF_00066 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LDCHJDGF_00067 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LDCHJDGF_00068 9.8e-177 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
LDCHJDGF_00069 6e-174 rapZ S Displays ATPase and GTPase activities
LDCHJDGF_00070 4.3e-175 whiA K May be required for sporulation
LDCHJDGF_00071 3.1e-223 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
LDCHJDGF_00072 9.5e-152 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LDCHJDGF_00073 4.7e-25 secG U Preprotein translocase SecG subunit
LDCHJDGF_00074 1.1e-160 S Sucrose-6F-phosphate phosphohydrolase
LDCHJDGF_00075 8.7e-309 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
LDCHJDGF_00076 4.6e-91 alaR K helix_turn_helix ASNC type
LDCHJDGF_00077 4e-231 yugH 2.6.1.1 E Aminotransferase class I and II
LDCHJDGF_00078 1.3e-66 S PFAM Pentapeptide repeats (8 copies)
LDCHJDGF_00079 1.4e-201 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LDCHJDGF_00080 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
LDCHJDGF_00081 3e-201 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LDCHJDGF_00082 2.8e-218 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LDCHJDGF_00083 4.2e-160 G Fructosamine kinase
LDCHJDGF_00084 2.6e-150 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LDCHJDGF_00085 2.3e-158 S PAC2 family
LDCHJDGF_00091 1.4e-23
LDCHJDGF_00092 1.4e-95 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
LDCHJDGF_00094 1.7e-98 S ATPases associated with a variety of cellular activities
LDCHJDGF_00095 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LDCHJDGF_00096 1.1e-116 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
LDCHJDGF_00097 1.9e-194 htrB 2.3.1.241, 2.3.1.265 M Bacterial lipid A biosynthesis acyltransferase
LDCHJDGF_00098 8.2e-190 pimA 2.4.1.345 GT4 M Glycosyl transferases group 1
LDCHJDGF_00099 3.6e-129 yebC K transcriptional regulatory protein
LDCHJDGF_00100 2.5e-101 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LDCHJDGF_00101 1.7e-108 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LDCHJDGF_00102 5e-204 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LDCHJDGF_00103 1.4e-53 yajC U Preprotein translocase subunit
LDCHJDGF_00104 1.7e-102 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LDCHJDGF_00105 1.5e-222 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
LDCHJDGF_00106 3.4e-166 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LDCHJDGF_00107 2.1e-244
LDCHJDGF_00108 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
LDCHJDGF_00109 5.7e-22
LDCHJDGF_00110 2e-167 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LDCHJDGF_00111 1.7e-145 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LDCHJDGF_00112 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
LDCHJDGF_00114 9.1e-283 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
LDCHJDGF_00115 0.0 pafB K WYL domain
LDCHJDGF_00116 5.8e-36
LDCHJDGF_00117 0.0 helY L DEAD DEAH box helicase
LDCHJDGF_00118 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
LDCHJDGF_00119 7.4e-140 pgp 3.1.3.18 S HAD-hyrolase-like
LDCHJDGF_00120 8.3e-66 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDCHJDGF_00121 1.2e-64 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDCHJDGF_00122 5e-69
LDCHJDGF_00123 3.1e-133 K helix_turn_helix, mercury resistance
LDCHJDGF_00124 1.1e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
LDCHJDGF_00125 3.2e-153 S Bacterial protein of unknown function (DUF881)
LDCHJDGF_00126 4.8e-33 sbp S Protein of unknown function (DUF1290)
LDCHJDGF_00127 8.7e-176 S Bacterial protein of unknown function (DUF881)
LDCHJDGF_00128 1.2e-109 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDCHJDGF_00129 1.2e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
LDCHJDGF_00130 2.2e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
LDCHJDGF_00131 4.5e-123 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
LDCHJDGF_00132 7.1e-183 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LDCHJDGF_00133 6.4e-162 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LDCHJDGF_00134 0.0 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LDCHJDGF_00137 8.8e-115 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
LDCHJDGF_00138 4.1e-300 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LDCHJDGF_00139 3.3e-76 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LDCHJDGF_00140 3.9e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LDCHJDGF_00141 2.2e-134 S ABC-2 type transporter
LDCHJDGF_00142 8.4e-114 nodI V ATPases associated with a variety of cellular activities
LDCHJDGF_00143 1.4e-104 K WHG domain
LDCHJDGF_00144 1.2e-230 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
LDCHJDGF_00145 5.5e-175 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
LDCHJDGF_00146 1.2e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LDCHJDGF_00147 1.3e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LDCHJDGF_00148 7.5e-139 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LDCHJDGF_00149 1.9e-161 rpsB J Belongs to the universal ribosomal protein uS2 family
LDCHJDGF_00150 8.3e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LDCHJDGF_00151 4.8e-285 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
LDCHJDGF_00152 1.4e-19
LDCHJDGF_00153 6.2e-210 guaB 1.1.1.205 F IMP dehydrogenase family protein
LDCHJDGF_00154 9.7e-241 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
LDCHJDGF_00155 2.5e-278 G ABC transporter substrate-binding protein
LDCHJDGF_00156 4.9e-103 M Peptidase family M23
LDCHJDGF_00157 3.6e-61
LDCHJDGF_00159 1.9e-89
LDCHJDGF_00161 7.8e-157 nagC GK ROK family
LDCHJDGF_00162 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
LDCHJDGF_00163 5.7e-85 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LDCHJDGF_00164 0.0 yjcE P Sodium/hydrogen exchanger family
LDCHJDGF_00165 3.6e-171 ypfH S Phospholipase/Carboxylesterase
LDCHJDGF_00166 7.9e-163 D nuclear chromosome segregation
LDCHJDGF_00167 6.9e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
LDCHJDGF_00168 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
LDCHJDGF_00169 2.6e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDCHJDGF_00170 3.6e-279 KLT Domain of unknown function (DUF4032)
LDCHJDGF_00171 1.5e-211 ugpC E Belongs to the ABC transporter superfamily
LDCHJDGF_00172 5.5e-189 U Ion channel
LDCHJDGF_00173 0.0 KLT Protein tyrosine kinase
LDCHJDGF_00174 5.8e-85 O Thioredoxin
LDCHJDGF_00176 1.2e-219 S G5
LDCHJDGF_00177 7e-164 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LDCHJDGF_00178 4.1e-178 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LDCHJDGF_00179 1.5e-112 S LytR cell envelope-related transcriptional attenuator
LDCHJDGF_00180 1.4e-308 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
LDCHJDGF_00181 3.5e-172 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
LDCHJDGF_00182 0.0
LDCHJDGF_00183 0.0 murJ KLT MviN-like protein
LDCHJDGF_00184 1.3e-179 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LDCHJDGF_00185 1.9e-232 parB K Belongs to the ParB family
LDCHJDGF_00186 8.7e-176 parA D CobQ CobB MinD ParA nucleotide binding domain protein
LDCHJDGF_00187 8.8e-136 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
LDCHJDGF_00188 3.2e-95 jag S Putative single-stranded nucleic acids-binding domain
LDCHJDGF_00189 5.6e-178 yidC U Membrane protein insertase, YidC Oxa1 family
LDCHJDGF_00190 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
LDCHJDGF_00191 0.0 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LDCHJDGF_00192 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LDCHJDGF_00193 9.2e-267 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LDCHJDGF_00194 5.8e-91 S Protein of unknown function (DUF721)
LDCHJDGF_00195 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDCHJDGF_00196 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LDCHJDGF_00197 6.2e-75 S Transmembrane domain of unknown function (DUF3566)
LDCHJDGF_00198 1.8e-217 V VanZ like family
LDCHJDGF_00199 1.9e-161 yplQ S Haemolysin-III related
LDCHJDGF_00200 5.8e-263 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
LDCHJDGF_00201 2e-236 EGP Major facilitator Superfamily
LDCHJDGF_00202 8.8e-162 3.2.1.78 GH26 G Glycosyl hydrolase family 26
LDCHJDGF_00203 4e-68 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LDCHJDGF_00204 3.5e-51 gcs2 S A circularly permuted ATPgrasp
LDCHJDGF_00207 2.4e-144 S Protein of unknown function DUF45
LDCHJDGF_00208 8.1e-78
LDCHJDGF_00209 1.6e-154 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LDCHJDGF_00210 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LDCHJDGF_00211 1.1e-149 ybaJ Q ubiE/COQ5 methyltransferase family
LDCHJDGF_00212 7.7e-166
LDCHJDGF_00213 2e-106 XK27_04590 S NADPH-dependent FMN reductase
LDCHJDGF_00214 8e-120
LDCHJDGF_00215 2.1e-22
LDCHJDGF_00218 4.7e-57 mazG S MazG-like family
LDCHJDGF_00219 4.4e-26 L Uncharacterized conserved protein (DUF2075)
LDCHJDGF_00221 3.1e-194 sinIM 2.1.1.37 H C-5 cytosine-specific DNA methylase
LDCHJDGF_00222 2e-47 S Type II restriction endonuclease EcoO109I
LDCHJDGF_00223 0.0
LDCHJDGF_00224 3.4e-111
LDCHJDGF_00225 0.0
LDCHJDGF_00226 2.8e-287
LDCHJDGF_00227 3.4e-38 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LDCHJDGF_00228 2.6e-34 chpA T Toxic component of a toxin-antitoxin (TA) module
LDCHJDGF_00229 4.5e-67 chpA T Toxic component of a toxin-antitoxin (TA) module
LDCHJDGF_00230 3.7e-165 K Bacterial regulatory helix-turn-helix protein, lysR family
LDCHJDGF_00231 1.4e-24 akr5f 1.1.1.346 S reductase
LDCHJDGF_00232 1.4e-121 akr5f 1.1.1.346 S Aldo/keto reductase family
LDCHJDGF_00233 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
LDCHJDGF_00234 3.6e-84 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
LDCHJDGF_00235 5.8e-21 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
LDCHJDGF_00236 1.3e-87 S Domain of unknown function (DUF4234)
LDCHJDGF_00237 6.3e-237 glf 5.4.99.9 M UDP-galactopyranose mutase
LDCHJDGF_00238 6.8e-116 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LDCHJDGF_00239 6.3e-207 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LDCHJDGF_00240 3.9e-273 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LDCHJDGF_00241 1.4e-256 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
LDCHJDGF_00242 2.1e-163 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LDCHJDGF_00243 8.6e-287 murC 6.3.2.8 M Belongs to the MurCDEF family
LDCHJDGF_00244 1e-222 ftsQ 6.3.2.4 D Cell division protein FtsQ
LDCHJDGF_00245 2.9e-160 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
LDCHJDGF_00246 3.1e-59 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
LDCHJDGF_00247 8.8e-193 dppB EP Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00248 1.2e-206 dppC EP Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00249 0.0 P Belongs to the ABC transporter superfamily
LDCHJDGF_00252 0.0 xkdG S Caudovirus prohead serine protease
LDCHJDGF_00254 1.4e-242 lhr L DEAD DEAH box helicase
LDCHJDGF_00255 6.3e-171 glcU G Sugar transport protein
LDCHJDGF_00256 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
LDCHJDGF_00257 2.5e-215 S Type I phosphodiesterase / nucleotide pyrophosphatase
LDCHJDGF_00258 1.6e-244 S Protein of unknown function (DUF3071)
LDCHJDGF_00259 1.8e-47 S Domain of unknown function (DUF4193)
LDCHJDGF_00260 1.2e-82 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
LDCHJDGF_00261 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LDCHJDGF_00262 1.6e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LDCHJDGF_00263 8.6e-179 metQ P NLPA lipoprotein
LDCHJDGF_00264 6.2e-238 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LDCHJDGF_00265 1.3e-120 metI P Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00266 2e-227 S Peptidase dimerisation domain
LDCHJDGF_00267 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDCHJDGF_00268 5.4e-32
LDCHJDGF_00269 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
LDCHJDGF_00270 9.5e-177 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LDCHJDGF_00271 9.3e-258 rnd 3.1.13.5 J 3'-5' exonuclease
LDCHJDGF_00272 1.5e-226 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LDCHJDGF_00273 1.3e-252 clcA_2 P Voltage gated chloride channel
LDCHJDGF_00274 1.3e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LDCHJDGF_00275 4.3e-124 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LDCHJDGF_00276 1.1e-250 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LDCHJDGF_00279 4.2e-244 patB 4.4.1.8 E Aminotransferase, class I II
LDCHJDGF_00280 3.7e-252 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LDCHJDGF_00281 4.7e-151 fmt2 3.2.2.10 S Belongs to the LOG family
LDCHJDGF_00282 1.3e-122 safC S O-methyltransferase
LDCHJDGF_00283 8.8e-173 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
LDCHJDGF_00284 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
LDCHJDGF_00285 1.3e-218 dprA 5.99.1.2 LU DNA recombination-mediator protein A
LDCHJDGF_00286 1.1e-276 comM O Magnesium chelatase, subunit ChlI C-terminal
LDCHJDGF_00287 2.2e-87 yraN L Belongs to the UPF0102 family
LDCHJDGF_00288 8.6e-167 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
LDCHJDGF_00289 5.6e-203 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
LDCHJDGF_00290 2e-112 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
LDCHJDGF_00291 1.9e-269 KLT Protein tyrosine kinase
LDCHJDGF_00292 0.0 S Fibronectin type 3 domain
LDCHJDGF_00293 7e-130 S ATPase family associated with various cellular activities (AAA)
LDCHJDGF_00294 5.4e-188 S Protein of unknown function DUF58
LDCHJDGF_00295 0.0 E Transglutaminase-like superfamily
LDCHJDGF_00296 3.6e-93 B Belongs to the OprB family
LDCHJDGF_00297 9.6e-104 T Forkhead associated domain
LDCHJDGF_00298 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDCHJDGF_00299 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDCHJDGF_00300 3.5e-50
LDCHJDGF_00301 4.2e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
LDCHJDGF_00302 1.2e-128 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LDCHJDGF_00303 1.4e-251 S UPF0210 protein
LDCHJDGF_00304 5.5e-43 gcvR T Belongs to the UPF0237 family
LDCHJDGF_00305 7.9e-149 srtC 3.4.22.70 M Sortase family
LDCHJDGF_00307 1.5e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
LDCHJDGF_00308 9.1e-258 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
LDCHJDGF_00309 1.3e-143 glpR K DeoR C terminal sensor domain
LDCHJDGF_00310 5.7e-194 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
LDCHJDGF_00311 7.5e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
LDCHJDGF_00312 3.2e-222 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
LDCHJDGF_00313 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
LDCHJDGF_00314 1e-139 glxR K helix_turn_helix, cAMP Regulatory protein
LDCHJDGF_00315 3.3e-222 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
LDCHJDGF_00316 1.1e-75 J TM2 domain
LDCHJDGF_00317 4.2e-20
LDCHJDGF_00318 1.8e-48 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
LDCHJDGF_00319 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
LDCHJDGF_00320 2.8e-262 hemN H Involved in the biosynthesis of porphyrin-containing compound
LDCHJDGF_00321 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LDCHJDGF_00322 3.4e-34 rpsT J Binds directly to 16S ribosomal RNA
LDCHJDGF_00323 5.2e-139 S UPF0126 domain
LDCHJDGF_00324 5.1e-228 ilvE 2.6.1.42 E Amino-transferase class IV
LDCHJDGF_00325 5e-108 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LDCHJDGF_00326 1.3e-195 S alpha beta
LDCHJDGF_00327 1.8e-254 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LDCHJDGF_00328 1.2e-46 pntA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
LDCHJDGF_00329 4.8e-202 pntAA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
LDCHJDGF_00330 0.0 fadD 6.2.1.3 I AMP-binding enzyme
LDCHJDGF_00331 3.4e-183 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LDCHJDGF_00332 8.4e-249 corC S CBS domain
LDCHJDGF_00333 2.5e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LDCHJDGF_00334 1.6e-213 phoH T PhoH-like protein
LDCHJDGF_00335 2.5e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
LDCHJDGF_00336 9.5e-102 K Psort location Cytoplasmic, score 8.87
LDCHJDGF_00337 0.0 pip S YhgE Pip domain protein
LDCHJDGF_00338 0.0 pip S YhgE Pip domain protein
LDCHJDGF_00339 2.5e-107 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
LDCHJDGF_00340 3.4e-132 XK26_04485 P Cobalt transport protein
LDCHJDGF_00341 6.2e-282 G ATPases associated with a variety of cellular activities
LDCHJDGF_00342 7.7e-182 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
LDCHJDGF_00343 4.3e-166 S esterase of the alpha-beta hydrolase superfamily
LDCHJDGF_00344 5e-142 S esterase of the alpha-beta hydrolase superfamily
LDCHJDGF_00345 1.2e-94
LDCHJDGF_00347 2e-310 pepD E Peptidase family C69
LDCHJDGF_00348 3.3e-121 icaR K Bacterial regulatory proteins, tetR family
LDCHJDGF_00349 1.9e-72 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LDCHJDGF_00350 1e-246 scrT G Transporter major facilitator family protein
LDCHJDGF_00351 4.8e-93 S Acetyltransferase (GNAT) family
LDCHJDGF_00352 2.7e-48 S Protein of unknown function (DUF1778)
LDCHJDGF_00353 3.9e-15
LDCHJDGF_00354 3.8e-257 yhjE EGP Sugar (and other) transporter
LDCHJDGF_00355 1.1e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LDCHJDGF_00357 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
LDCHJDGF_00358 6.5e-220 E GDSL-like Lipase/Acylhydrolase family
LDCHJDGF_00359 8e-284 bglA 3.2.1.21 G Glycosyl hydrolase family 1
LDCHJDGF_00360 1e-136 G beta-mannosidase
LDCHJDGF_00361 5.2e-187 K helix_turn _helix lactose operon repressor
LDCHJDGF_00362 3.4e-112 S Protein of unknown function, DUF624
LDCHJDGF_00363 8.9e-133
LDCHJDGF_00364 3e-25
LDCHJDGF_00365 3.3e-260 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
LDCHJDGF_00366 3.1e-133 ybbL V ATPases associated with a variety of cellular activities
LDCHJDGF_00367 1.9e-145 ybbM V Uncharacterised protein family (UPF0014)
LDCHJDGF_00368 6e-277 aroP E aromatic amino acid transport protein AroP K03293
LDCHJDGF_00370 1.1e-127 V ABC transporter
LDCHJDGF_00371 0.0 V FtsX-like permease family
LDCHJDGF_00372 6.4e-282 cycA E Amino acid permease
LDCHJDGF_00373 4.6e-33 V efflux transmembrane transporter activity
LDCHJDGF_00374 2.8e-19 MV MacB-like periplasmic core domain
LDCHJDGF_00375 4.6e-305 M MacB-like periplasmic core domain
LDCHJDGF_00376 9.3e-74 V ABC transporter, ATP-binding protein
LDCHJDGF_00377 1.2e-106 ydgJ K helix_turn_helix multiple antibiotic resistance protein
LDCHJDGF_00378 0.0 lmrA1 V ABC transporter, ATP-binding protein
LDCHJDGF_00379 0.0 lmrA2 V ABC transporter transmembrane region
LDCHJDGF_00380 4e-268 xynD 3.2.1.8, 3.5.1.104, 3.5.1.41 G Polysaccharide deacetylase
LDCHJDGF_00381 6e-123 3.6.1.27 I Acid phosphatase homologues
LDCHJDGF_00382 1.6e-114 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
LDCHJDGF_00383 2.7e-73
LDCHJDGF_00384 3.7e-219 natB E Receptor family ligand binding region
LDCHJDGF_00387 4.2e-211 int8 L Phage integrase family
LDCHJDGF_00388 1.3e-84 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LDCHJDGF_00389 1.5e-169 2.7.1.4 G pfkB family carbohydrate kinase
LDCHJDGF_00390 4.8e-224 GK ROK family
LDCHJDGF_00391 8.8e-98 3.6.1.55 F NUDIX domain
LDCHJDGF_00392 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
LDCHJDGF_00393 1.5e-149
LDCHJDGF_00394 2.9e-186 2.7.13.3 T Histidine kinase
LDCHJDGF_00395 5e-116 gerE KT cheY-homologous receiver domain
LDCHJDGF_00396 1.1e-297 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
LDCHJDGF_00397 1.1e-200 V Acetyltransferase (GNAT) domain
LDCHJDGF_00398 4.6e-296 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDCHJDGF_00399 1.5e-127 sigH K Belongs to the sigma-70 factor family. ECF subfamily
LDCHJDGF_00400 6e-54
LDCHJDGF_00401 1.1e-197 galM 5.1.3.3 G Aldose 1-epimerase
LDCHJDGF_00402 6.5e-179 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LDCHJDGF_00403 1.1e-261 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LDCHJDGF_00404 5.8e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LDCHJDGF_00405 6.6e-95 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LDCHJDGF_00406 7e-228 gldA 1.1.1.1, 1.1.1.6 C Iron-containing alcohol dehydrogenase
LDCHJDGF_00407 3e-142 S 3-oxo-5-alpha-steroid 4-dehydrogenase
LDCHJDGF_00408 1.2e-88 XK27_03610 K Acetyltransferase (GNAT) domain
LDCHJDGF_00409 3.1e-92 doc S Fic/DOC family
LDCHJDGF_00410 4.4e-94 gepA S Protein of unknown function (DUF4065)
LDCHJDGF_00411 0.0 S Protein of unknown function (DUF1524)
LDCHJDGF_00412 3.6e-63 mloA S Fic/DOC family
LDCHJDGF_00413 0.0 KL Domain of unknown function (DUF3427)
LDCHJDGF_00414 2.6e-73 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
LDCHJDGF_00415 2.1e-64
LDCHJDGF_00416 1.2e-58
LDCHJDGF_00418 8.1e-22 M1-431 S Protein of unknown function (DUF1706)
LDCHJDGF_00419 1.2e-38 M1-431 S Protein of unknown function (DUF1706)
LDCHJDGF_00422 6.4e-107 J Acetyltransferase (GNAT) domain
LDCHJDGF_00423 2.2e-173 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
LDCHJDGF_00424 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
LDCHJDGF_00425 1e-190 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
LDCHJDGF_00426 1.4e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
LDCHJDGF_00427 3.6e-140 sapF E ATPases associated with a variety of cellular activities
LDCHJDGF_00428 1.7e-140 P ATPases associated with a variety of cellular activities
LDCHJDGF_00429 1.5e-155 EP Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00430 7.8e-169 P Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00431 0.0 E ABC transporter, substrate-binding protein, family 5
LDCHJDGF_00432 1.1e-136 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LDCHJDGF_00433 3.2e-68
LDCHJDGF_00434 5.2e-144 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
LDCHJDGF_00435 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LDCHJDGF_00436 1.4e-127 K helix_turn_helix, Lux Regulon
LDCHJDGF_00437 1e-181 K Psort location Cytoplasmic, score
LDCHJDGF_00438 1.1e-153 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
LDCHJDGF_00439 4.4e-151 yecS E Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00440 1.9e-167 pknD ET ABC transporter, substrate-binding protein, family 3
LDCHJDGF_00441 2.3e-154 pknD ET ABC transporter, substrate-binding protein, family 3
LDCHJDGF_00442 4.2e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LDCHJDGF_00443 3.3e-184 usp 3.5.1.28 CBM50 D CHAP domain protein
LDCHJDGF_00444 9.4e-164 ftsX D Part of the ABC transporter FtsEX involved in cellular division
LDCHJDGF_00445 3.9e-227 ftsE D Cell division ATP-binding protein FtsE
LDCHJDGF_00446 5.1e-204 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LDCHJDGF_00447 2.1e-169 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
LDCHJDGF_00448 8.6e-84 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LDCHJDGF_00449 2.2e-251 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
LDCHJDGF_00450 2e-130 map 3.4.11.18 E Methionine aminopeptidase
LDCHJDGF_00451 5.7e-104 S Short repeat of unknown function (DUF308)
LDCHJDGF_00452 0.0 pepO 3.4.24.71 O Peptidase family M13
LDCHJDGF_00453 1.2e-134 L Single-strand binding protein family
LDCHJDGF_00454 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LDCHJDGF_00455 2.5e-74
LDCHJDGF_00456 1.6e-277 recD2 3.6.4.12 L PIF1-like helicase
LDCHJDGF_00457 2.7e-157 supH S Sucrose-6F-phosphate phosphohydrolase
LDCHJDGF_00458 5.7e-123 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
LDCHJDGF_00459 1e-273 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
LDCHJDGF_00461 2.3e-158 L Tetratricopeptide repeat
LDCHJDGF_00462 1.5e-194 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
LDCHJDGF_00463 5.4e-144 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LDCHJDGF_00464 3.9e-273 trkB P Cation transport protein
LDCHJDGF_00465 2.7e-117 trkA P TrkA-N domain
LDCHJDGF_00466 5.6e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LDCHJDGF_00467 0.0 recN L May be involved in recombinational repair of damaged DNA
LDCHJDGF_00468 3.3e-129 S Haloacid dehalogenase-like hydrolase
LDCHJDGF_00469 1.5e-288 thrC 4.2.3.1 E Threonine synthase N terminus
LDCHJDGF_00470 3.5e-236 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LDCHJDGF_00471 1.9e-115
LDCHJDGF_00472 7.8e-134 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LDCHJDGF_00473 8.2e-193 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDCHJDGF_00475 1e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LDCHJDGF_00476 4.2e-71 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LDCHJDGF_00477 8e-122 gpmB 3.1.3.73, 3.1.3.85 G Phosphoglycerate mutase family
LDCHJDGF_00478 1.8e-82
LDCHJDGF_00481 8.3e-72 pdxH S Pfam:Pyridox_oxidase
LDCHJDGF_00482 3e-161 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
LDCHJDGF_00483 1.2e-169 corA P CorA-like Mg2+ transporter protein
LDCHJDGF_00484 6.1e-168 ET Bacterial periplasmic substrate-binding proteins
LDCHJDGF_00485 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDCHJDGF_00486 8.6e-118 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
LDCHJDGF_00487 0.0 comE S Competence protein
LDCHJDGF_00488 1.8e-187 holA 2.7.7.7 L DNA polymerase III delta subunit
LDCHJDGF_00489 8e-114 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
LDCHJDGF_00490 9.2e-158 yeaZ 2.3.1.234 O Glycoprotease family
LDCHJDGF_00491 7.5e-91 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
LDCHJDGF_00492 4e-40
LDCHJDGF_00493 5.5e-211 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
LDCHJDGF_00494 2.8e-218 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
LDCHJDGF_00495 3.3e-109
LDCHJDGF_00496 0.0 typA T Elongation factor G C-terminus
LDCHJDGF_00497 5.6e-189 naiP U Sugar (and other) transporter
LDCHJDGF_00498 1e-119 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LDCHJDGF_00499 1.9e-92
LDCHJDGF_00501 1.8e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LDCHJDGF_00502 3.5e-180 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDCHJDGF_00504 1.9e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LDCHJDGF_00505 4.4e-219 I Diacylglycerol kinase catalytic domain
LDCHJDGF_00506 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
LDCHJDGF_00507 4.5e-80 S alpha beta
LDCHJDGF_00508 7.1e-187 S alpha beta
LDCHJDGF_00509 9.6e-112 S Protein of unknown function (DUF4125)
LDCHJDGF_00510 0.0 S Domain of unknown function (DUF4037)
LDCHJDGF_00511 6e-126 degU K helix_turn_helix, Lux Regulon
LDCHJDGF_00512 2e-269 tcsS3 KT PspC domain
LDCHJDGF_00513 0.0 pspC KT PspC domain
LDCHJDGF_00514 7.2e-102
LDCHJDGF_00515 1.1e-115 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LDCHJDGF_00516 8.8e-308 S Sel1-like repeats.
LDCHJDGF_00517 4.6e-279 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LDCHJDGF_00519 3.8e-179 htpX O Belongs to the peptidase M48B family
LDCHJDGF_00520 4.8e-213 lppW 3.5.2.6 V Beta-lactamase
LDCHJDGF_00521 2.5e-123 E SOS response associated peptidase (SRAP)
LDCHJDGF_00522 1.1e-228 araJ EGP Major facilitator Superfamily
LDCHJDGF_00523 1.1e-11 S NADPH-dependent FMN reductase
LDCHJDGF_00524 7.7e-52 relB L RelB antitoxin
LDCHJDGF_00525 4.9e-87 ogt 2.1.1.63, 3.2.2.21 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LDCHJDGF_00526 1.7e-270 2.7.11.1 S cellulose binding
LDCHJDGF_00527 1.1e-141 4.1.1.44 S Carboxymuconolactone decarboxylase family
LDCHJDGF_00528 1.3e-86 4.1.1.44 S Cupin domain
LDCHJDGF_00529 8.2e-190 S Dienelactone hydrolase family
LDCHJDGF_00530 8.3e-162 K Bacterial regulatory helix-turn-helix protein, lysR family
LDCHJDGF_00531 8.8e-195 C Aldo/keto reductase family
LDCHJDGF_00533 3.8e-251 P nitric oxide dioxygenase activity
LDCHJDGF_00534 9.3e-89 C Flavodoxin
LDCHJDGF_00535 6.3e-40 K helix_turn_helix, mercury resistance
LDCHJDGF_00536 5.9e-85 fldA C Flavodoxin
LDCHJDGF_00537 6.9e-147 GM NmrA-like family
LDCHJDGF_00538 7.4e-205 adh 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
LDCHJDGF_00539 2e-166 K LysR substrate binding domain
LDCHJDGF_00540 3.7e-254 3.5.1.104 G Polysaccharide deacetylase
LDCHJDGF_00541 3e-195 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
LDCHJDGF_00542 2.2e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LDCHJDGF_00543 1.2e-174 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDCHJDGF_00544 6.5e-63 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LDCHJDGF_00545 3e-233 U Belongs to the binding-protein-dependent transport system permease family
LDCHJDGF_00546 9.7e-159 livM U Belongs to the binding-protein-dependent transport system permease family
LDCHJDGF_00547 5.3e-160 natA E Branched-chain amino acid ATP-binding cassette transporter
LDCHJDGF_00548 1.6e-151 livF E ATPases associated with a variety of cellular activities
LDCHJDGF_00549 1.1e-215 natB E Receptor family ligand binding region
LDCHJDGF_00550 4.8e-193 K helix_turn _helix lactose operon repressor
LDCHJDGF_00551 7.4e-299 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
LDCHJDGF_00552 2.4e-295 G Transporter major facilitator family protein
LDCHJDGF_00553 7.6e-108 natB E Receptor family ligand binding region
LDCHJDGF_00554 8.4e-243 bccA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Biotin carboxylase C-terminal domain
LDCHJDGF_00555 1.9e-183 4.2.1.48 S Domain of unknown function (DUF4392)
LDCHJDGF_00556 0.0 rne 3.1.26.12 J Ribonuclease E/G family
LDCHJDGF_00557 1.1e-236 dapE 3.5.1.18 E Peptidase dimerisation domain
LDCHJDGF_00558 1.9e-172 dapE 3.5.1.18 E Peptidase dimerisation domain
LDCHJDGF_00559 2.8e-255 V Efflux ABC transporter, permease protein
LDCHJDGF_00560 9.7e-159 V ATPases associated with a variety of cellular activities
LDCHJDGF_00561 2.4e-144 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LDCHJDGF_00562 2.7e-137 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LDCHJDGF_00563 1e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LDCHJDGF_00564 0.0 pgi 5.3.1.9 G Belongs to the GPI family
LDCHJDGF_00565 1.8e-218 manC 2.7.7.13, 5.3.1.8 M Mannose-6-phosphate isomerase
LDCHJDGF_00568 4e-184 S Auxin Efflux Carrier
LDCHJDGF_00569 1e-245 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
LDCHJDGF_00570 4.1e-130 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LDCHJDGF_00571 1.5e-135 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LDCHJDGF_00572 2.4e-46
LDCHJDGF_00573 8.5e-251 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LDCHJDGF_00574 6e-196 yghZ C Aldo/keto reductase family
LDCHJDGF_00575 1.4e-49 S Protein of unknown function (DUF3039)
LDCHJDGF_00576 1.3e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LDCHJDGF_00577 5.8e-121
LDCHJDGF_00578 1.9e-112 yceD S Uncharacterized ACR, COG1399
LDCHJDGF_00579 1.4e-24 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LDCHJDGF_00580 9.5e-141 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LDCHJDGF_00581 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
LDCHJDGF_00582 3.4e-92 ilvN 2.2.1.6 E ACT domain
LDCHJDGF_00583 3e-136 guaA1 6.3.5.2 F Peptidase C26
LDCHJDGF_00584 4.7e-100 yjjK S ABC transporter
LDCHJDGF_00585 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
LDCHJDGF_00586 1.2e-117 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
LDCHJDGF_00587 1e-279 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LDCHJDGF_00588 1.2e-174 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
LDCHJDGF_00589 2.1e-166 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LDCHJDGF_00590 3.7e-128 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LDCHJDGF_00591 2.1e-10 M LysM domain
LDCHJDGF_00592 9.5e-97 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LDCHJDGF_00593 2.7e-227 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LDCHJDGF_00594 0.0 L DNA helicase
LDCHJDGF_00595 9.3e-86 mraZ K Belongs to the MraZ family
LDCHJDGF_00596 3.1e-195 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LDCHJDGF_00597 9.5e-92 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LDCHJDGF_00598 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
LDCHJDGF_00599 8.7e-159 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LDCHJDGF_00600 5.6e-145 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LDCHJDGF_00601 7.5e-24 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDCHJDGF_00602 7.4e-121 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LDCHJDGF_00603 1.6e-219 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
LDCHJDGF_00604 3.3e-132 KT Transcriptional regulatory protein, C terminal
LDCHJDGF_00605 3.2e-206 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
LDCHJDGF_00606 8.5e-171 pstC P probably responsible for the translocation of the substrate across the membrane
LDCHJDGF_00607 8.3e-174 pstA P Phosphate transport system permease
LDCHJDGF_00608 8.9e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LDCHJDGF_00609 1.3e-249 pbuO S Permease family
LDCHJDGF_00610 9.3e-164 P Zinc-uptake complex component A periplasmic
LDCHJDGF_00611 2.1e-88 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LDCHJDGF_00612 2.4e-44 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LDCHJDGF_00613 9.2e-263 T Forkhead associated domain
LDCHJDGF_00614 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
LDCHJDGF_00615 5.6e-39
LDCHJDGF_00616 7.9e-103 flgA NO SAF
LDCHJDGF_00617 6.8e-32 fmdB S Putative regulatory protein
LDCHJDGF_00618 4e-141 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
LDCHJDGF_00619 3.3e-121 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
LDCHJDGF_00620 2.5e-196
LDCHJDGF_00621 2.3e-47 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LDCHJDGF_00625 1.9e-25 rpmG J Ribosomal protein L33
LDCHJDGF_00626 1.7e-232 murB 1.3.1.98 M Cell wall formation
LDCHJDGF_00627 6.6e-290 E aromatic amino acid transport protein AroP K03293
LDCHJDGF_00628 7.6e-60 fdxA C 4Fe-4S binding domain
LDCHJDGF_00629 6.8e-220 dapC E Aminotransferase class I and II
LDCHJDGF_00630 2e-252 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LDCHJDGF_00632 1.3e-190 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LDCHJDGF_00633 2.8e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
LDCHJDGF_00634 3.9e-122
LDCHJDGF_00635 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
LDCHJDGF_00636 1.2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LDCHJDGF_00637 8.5e-63 rpsI J Belongs to the universal ribosomal protein uS9 family
LDCHJDGF_00638 5.8e-56 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LDCHJDGF_00639 1.5e-214 trxB1 1.8.1.9 C Thioredoxin domain
LDCHJDGF_00640 5e-173 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
LDCHJDGF_00641 1.1e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LDCHJDGF_00642 1.8e-189 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
LDCHJDGF_00643 1.2e-182 draG O ADP-ribosylglycohydrolase
LDCHJDGF_00644 2.6e-58 ytfH K HxlR-like helix-turn-helix
LDCHJDGF_00645 2.8e-51 3.6.1.55 L NUDIX domain
LDCHJDGF_00646 8.9e-80 2.3.1.1 K Psort location Cytoplasmic, score 8.87
LDCHJDGF_00647 1.9e-124 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LDCHJDGF_00648 1.9e-23 G Major Facilitator Superfamily
LDCHJDGF_00649 3e-133 K -acetyltransferase
LDCHJDGF_00650 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
LDCHJDGF_00651 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
LDCHJDGF_00652 2.3e-142 sufC O FeS assembly ATPase SufC
LDCHJDGF_00653 3.5e-241 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LDCHJDGF_00654 8.9e-104 iscU C SUF system FeS assembly protein, NifU family
LDCHJDGF_00655 3.5e-92 yitW S Iron-sulfur cluster assembly protein
LDCHJDGF_00656 4.3e-234 EGP Major facilitator Superfamily
LDCHJDGF_00657 0.0 fadD 6.2.1.3 I AMP-binding enzyme
LDCHJDGF_00658 2.5e-200 L Transposase, Mutator family
LDCHJDGF_00660 1.4e-308
LDCHJDGF_00661 1.3e-142 E Psort location Cytoplasmic, score 8.87
LDCHJDGF_00662 2.4e-65 S Zincin-like metallopeptidase
LDCHJDGF_00663 4.9e-72 yccF S Inner membrane component domain
LDCHJDGF_00664 1.1e-141 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LDCHJDGF_00665 2.7e-46 yhbY J CRS1_YhbY
LDCHJDGF_00666 8.6e-164 yvgN 1.1.1.346 S Aldo/keto reductase family
LDCHJDGF_00667 0.0 ecfA GP ABC transporter, ATP-binding protein
LDCHJDGF_00668 9.9e-98 ecfA GP ABC transporter, ATP-binding protein
LDCHJDGF_00669 1.3e-134 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
LDCHJDGF_00670 1.7e-223 E Aminotransferase class I and II
LDCHJDGF_00671 4e-150 bioM P ATPases associated with a variety of cellular activities
LDCHJDGF_00672 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDCHJDGF_00673 0.0 S Tetratricopeptide repeat
LDCHJDGF_00674 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LDCHJDGF_00675 3.2e-206 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
LDCHJDGF_00676 2.6e-109 ykoE S ABC-type cobalt transport system, permease component
LDCHJDGF_00677 7e-283 glnA 6.3.1.2 E glutamine synthetase
LDCHJDGF_00678 1.6e-148 S Domain of unknown function (DUF4191)
LDCHJDGF_00679 3.4e-280 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LDCHJDGF_00680 9.5e-104 S Protein of unknown function (DUF3043)
LDCHJDGF_00681 9.7e-266 argE E Peptidase dimerisation domain
LDCHJDGF_00682 1.3e-212 2.7.13.3 T Histidine kinase
LDCHJDGF_00683 2.1e-44
LDCHJDGF_00684 8.2e-162 V N-Acetylmuramoyl-L-alanine amidase
LDCHJDGF_00685 1.3e-226 ytrE V lipoprotein transporter activity
LDCHJDGF_00686 9.3e-107 ykoE S ABC-type cobalt transport system, permease component
LDCHJDGF_00687 7.8e-80 cbiQ P ATPases associated with a variety of cellular activities
LDCHJDGF_00688 1.2e-83 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
LDCHJDGF_00689 2.4e-130 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
LDCHJDGF_00690 1.6e-28 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
LDCHJDGF_00692 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LDCHJDGF_00693 2.2e-103
LDCHJDGF_00694 1.4e-291 E Phospholipase B
LDCHJDGF_00695 1.9e-266 pepC 3.4.22.40 E Peptidase C1-like family
LDCHJDGF_00696 0.0 gadC E Amino acid permease
LDCHJDGF_00697 9.2e-302 E Serine carboxypeptidase
LDCHJDGF_00698 1.7e-274 puuP_1 E Amino acid permease
LDCHJDGF_00699 9.9e-77 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
LDCHJDGF_00700 3.4e-140 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LDCHJDGF_00701 0.0 4.2.1.53 S MCRA family
LDCHJDGF_00702 5.6e-64 3.5.1.10 C Zinc-binding dehydrogenase
LDCHJDGF_00703 1.2e-123 1.6.5.5 C Zinc-binding dehydrogenase
LDCHJDGF_00704 6e-282 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G Phosphomannose isomerase type I
LDCHJDGF_00705 6.7e-22
LDCHJDGF_00706 5.5e-224 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDCHJDGF_00707 3.3e-121 phoU P Plays a role in the regulation of phosphate uptake
LDCHJDGF_00708 1.6e-210 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LDCHJDGF_00709 5.6e-173 usp 3.5.1.28 CBM50 S CHAP domain
LDCHJDGF_00710 2.1e-98 M NlpC/P60 family
LDCHJDGF_00711 2.4e-195 T Universal stress protein family
LDCHJDGF_00712 5.9e-73 attW O OsmC-like protein
LDCHJDGF_00713 7.4e-169
LDCHJDGF_00714 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
LDCHJDGF_00715 4.1e-289 S Uncharacterized conserved protein (DUF2183)
LDCHJDGF_00716 8.4e-72 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
LDCHJDGF_00717 1.3e-215 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
LDCHJDGF_00718 5e-173 mhpC I Alpha/beta hydrolase family
LDCHJDGF_00719 2e-88 F Domain of unknown function (DUF4916)
LDCHJDGF_00720 4.6e-67 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
LDCHJDGF_00721 2e-178 S G5
LDCHJDGF_00722 1.5e-286 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
LDCHJDGF_00723 3.3e-77
LDCHJDGF_00724 1.1e-272 S Predicted membrane protein (DUF2142)
LDCHJDGF_00725 2.7e-188 rfbJ M Glycosyl transferase family 2
LDCHJDGF_00726 0.0 pflA S Protein of unknown function (DUF4012)
LDCHJDGF_00727 1.1e-152 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LDCHJDGF_00728 1.2e-103 S Endonuclease/Exonuclease/phosphatase family
LDCHJDGF_00729 0.0 lacZ 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LDCHJDGF_00730 7.9e-66 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LDCHJDGF_00731 1.5e-46 CP_0960 S Belongs to the UPF0109 family
LDCHJDGF_00732 2.7e-120 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LDCHJDGF_00733 4.8e-159 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LDCHJDGF_00734 8.4e-102 rsmD 2.1.1.171 L Conserved hypothetical protein 95
LDCHJDGF_00735 0.0 M Spy0128-like isopeptide containing domain
LDCHJDGF_00736 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
LDCHJDGF_00737 2.9e-30 rpmB J Ribosomal L28 family
LDCHJDGF_00738 1.8e-198 yegV G pfkB family carbohydrate kinase
LDCHJDGF_00739 5.6e-308 S Psort location Cytoplasmic, score 8.87
LDCHJDGF_00740 0.0 S Psort location Cytoplasmic, score 8.87
LDCHJDGF_00741 2.9e-229 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
LDCHJDGF_00742 3.4e-163 S Putative ABC-transporter type IV
LDCHJDGF_00743 3.9e-234 MA20_36090 S Psort location Cytoplasmic, score 8.87
LDCHJDGF_00744 1.9e-115 K Bacterial regulatory proteins, tetR family
LDCHJDGF_00745 4.4e-144 M Mechanosensitive ion channel
LDCHJDGF_00746 7.4e-179 S CAAX protease self-immunity
LDCHJDGF_00747 3.9e-63 S Domain of unknown function (DUF4854)
LDCHJDGF_00748 1.3e-197 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
LDCHJDGF_00749 2.6e-115 ywlC 2.7.7.87 J Belongs to the SUA5 family
LDCHJDGF_00750 3.7e-176 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LDCHJDGF_00751 4.9e-167 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LDCHJDGF_00752 8.6e-36 rpmE J Binds the 23S rRNA
LDCHJDGF_00753 3.6e-219 xylR GK ROK family
LDCHJDGF_00754 1.7e-290 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
LDCHJDGF_00755 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
LDCHJDGF_00756 2.3e-236 CE10 I Belongs to the type-B carboxylesterase lipase family
LDCHJDGF_00757 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
LDCHJDGF_00758 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
LDCHJDGF_00759 3.3e-158 MA20_14020 P Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00760 2.9e-193 MA20_14025 U Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00761 8.8e-245 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
LDCHJDGF_00762 4.9e-190 K Bacterial regulatory proteins, lacI family
LDCHJDGF_00763 0.0 G Belongs to the glycosyl hydrolase 43 family
LDCHJDGF_00764 4e-272 xylA 5.3.1.5 G Belongs to the xylose isomerase family
LDCHJDGF_00765 1.4e-35 rpmE J Binds the 23S rRNA
LDCHJDGF_00766 1.3e-173
LDCHJDGF_00768 2.2e-133
LDCHJDGF_00769 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
LDCHJDGF_00770 1e-256 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
LDCHJDGF_00771 3.2e-66 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LDCHJDGF_00772 7.3e-300 yjjK S ATP-binding cassette protein, ChvD family
LDCHJDGF_00773 2.6e-174 tesB I Thioesterase-like superfamily
LDCHJDGF_00774 2.3e-113 S Protein of unknown function (DUF3180)
LDCHJDGF_00775 3e-143 folK 2.5.1.15, 2.6.1.85, 2.7.6.3, 3.5.4.16, 4.1.2.25 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LDCHJDGF_00776 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LDCHJDGF_00777 2.5e-98 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LDCHJDGF_00778 5.9e-216 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LDCHJDGF_00779 3.5e-229 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
LDCHJDGF_00780 0.0
LDCHJDGF_00781 1.3e-162 natA V ATPases associated with a variety of cellular activities
LDCHJDGF_00782 2.9e-243 epsG M Glycosyl transferase family 21
LDCHJDGF_00783 1.2e-294 S AI-2E family transporter
LDCHJDGF_00784 1.3e-182 3.4.14.13 M Glycosyltransferase like family 2
LDCHJDGF_00787 3.3e-52 opcA G Glucose-6-phosphate dehydrogenase subunit
LDCHJDGF_00788 4.8e-148 pgl 3.1.1.31 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
LDCHJDGF_00789 6.1e-282 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LDCHJDGF_00790 1.5e-39 pepE 3.4.13.21 E Peptidase family S51
LDCHJDGF_00791 1.4e-251 brnQ U Component of the transport system for branched-chain amino acids
LDCHJDGF_00792 7.2e-194 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LDCHJDGF_00793 0.0 pacS 3.6.3.54 P E1-E2 ATPase
LDCHJDGF_00794 2.2e-148 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LDCHJDGF_00795 1.7e-308 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
LDCHJDGF_00796 4.9e-199 MA20_14895 S Conserved hypothetical protein 698
LDCHJDGF_00797 8.2e-260 rutG F Permease family
LDCHJDGF_00798 2.1e-215 lipA I Hydrolase, alpha beta domain protein
LDCHJDGF_00799 2.6e-30
LDCHJDGF_00800 2.1e-58 S Cupin 2, conserved barrel domain protein
LDCHJDGF_00801 1e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LDCHJDGF_00802 6.5e-145 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LDCHJDGF_00803 1.3e-270 pip 3.4.11.5 S alpha/beta hydrolase fold
LDCHJDGF_00804 0.0 tcsS2 T Histidine kinase
LDCHJDGF_00805 1.4e-119 K helix_turn_helix, Lux Regulon
LDCHJDGF_00806 0.0 MV MacB-like periplasmic core domain
LDCHJDGF_00807 8.1e-171 V ABC transporter, ATP-binding protein
LDCHJDGF_00808 1.9e-96 ecfT P transmembrane transporter activity
LDCHJDGF_00809 1.8e-292 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
LDCHJDGF_00810 1.3e-10 metY 2.5.1.49 E Aminotransferase class-V
LDCHJDGF_00811 2.1e-210 metY 2.5.1.49 E Aminotransferase class-V
LDCHJDGF_00812 1.1e-174 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LDCHJDGF_00813 4.1e-132 folA 1.5.1.3 H dihydrofolate reductase
LDCHJDGF_00814 5.6e-100 ptpA 3.1.3.48 T low molecular weight
LDCHJDGF_00815 3.6e-201 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LDCHJDGF_00816 1.1e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LDCHJDGF_00818 2.8e-183 XK27_05540 S DUF218 domain
LDCHJDGF_00819 7.7e-188 3.1.3.5 S 5'-nucleotidase
LDCHJDGF_00820 4.6e-108
LDCHJDGF_00821 2.8e-293 L AAA ATPase domain
LDCHJDGF_00822 1.1e-54 S Cutinase
LDCHJDGF_00823 1.4e-228 S Uncharacterized protein conserved in bacteria (DUF2130)
LDCHJDGF_00824 3.3e-294 S Psort location Cytoplasmic, score 8.87
LDCHJDGF_00825 3e-145 S Domain of unknown function (DUF4194)
LDCHJDGF_00826 0.0 S Psort location Cytoplasmic, score 8.87
LDCHJDGF_00827 1.4e-236 S Psort location Cytoplasmic, score 8.87
LDCHJDGF_00829 2.6e-64 yeaO K Protein of unknown function, DUF488
LDCHJDGF_00830 2.8e-274 lacS G Psort location CytoplasmicMembrane, score 10.00
LDCHJDGF_00831 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LDCHJDGF_00832 2.8e-185 lacR K Transcriptional regulator, LacI family
LDCHJDGF_00833 5.7e-117 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LDCHJDGF_00834 5.8e-62
LDCHJDGF_00835 7e-96 S Domain of unknown function (DUF4190)
LDCHJDGF_00836 1.3e-77 S Domain of unknown function (DUF4190)
LDCHJDGF_00837 9.4e-205 G Bacterial extracellular solute-binding protein
LDCHJDGF_00838 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LDCHJDGF_00839 6.3e-174 G ABC transporter permease
LDCHJDGF_00840 1.8e-173 G Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00841 1.7e-187 K Periplasmic binding protein domain
LDCHJDGF_00843 0.0 S Uncharacterised protein family (UPF0182)
LDCHJDGF_00844 7.1e-110 2.3.1.183 M Acetyltransferase (GNAT) domain
LDCHJDGF_00845 4.6e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LDCHJDGF_00846 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LDCHJDGF_00848 9.8e-129 ssuB P ATPases associated with a variety of cellular activities
LDCHJDGF_00849 4.6e-177 P NMT1-like family
LDCHJDGF_00850 1.1e-164 ssuC U Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00851 2.2e-200 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LDCHJDGF_00852 1.2e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDCHJDGF_00853 1.2e-47 S Protein of unknown function (DUF3073)
LDCHJDGF_00854 1.4e-80 I Sterol carrier protein
LDCHJDGF_00855 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LDCHJDGF_00856 5.4e-36
LDCHJDGF_00857 5.7e-129 gluP 3.4.21.105 S Rhomboid family
LDCHJDGF_00858 2.2e-284 L ribosomal rna small subunit methyltransferase
LDCHJDGF_00859 7.2e-37 crgA D Involved in cell division
LDCHJDGF_00860 3.3e-141 S Bacterial protein of unknown function (DUF881)
LDCHJDGF_00861 9.2e-225 srtA 3.4.22.70 M Sortase family
LDCHJDGF_00862 3.1e-121 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
LDCHJDGF_00863 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
LDCHJDGF_00864 1.3e-193 T Protein tyrosine kinase
LDCHJDGF_00865 2.2e-271 pbpA M penicillin-binding protein
LDCHJDGF_00866 1.1e-290 rodA D Belongs to the SEDS family
LDCHJDGF_00867 1.6e-269 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
LDCHJDGF_00868 8e-62 fhaB T Inner membrane component of T3SS, cytoplasmic domain
LDCHJDGF_00869 2.3e-130 fhaA T Protein of unknown function (DUF2662)
LDCHJDGF_00870 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
LDCHJDGF_00871 4.7e-127 yicL EG EamA-like transporter family
LDCHJDGF_00872 3.1e-214 pldB 3.1.1.5 I Serine aminopeptidase, S33
LDCHJDGF_00873 7.2e-262 rarA L Recombination factor protein RarA
LDCHJDGF_00874 0.0 L DEAD DEAH box helicase
LDCHJDGF_00875 9.8e-188 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
LDCHJDGF_00876 2.1e-202 gluD E Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00877 5.2e-111 gluC E Binding-protein-dependent transport system inner membrane component
LDCHJDGF_00878 4.3e-155 gluB ET Belongs to the bacterial solute-binding protein 3 family
LDCHJDGF_00879 3e-142 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
LDCHJDGF_00880 9.6e-149 aroD S Serine aminopeptidase, S33
LDCHJDGF_00881 3.7e-228 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
LDCHJDGF_00882 8.7e-259 hisS 6.1.1.21 J Histidyl-tRNA synthetase
LDCHJDGF_00883 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LDCHJDGF_00884 2.1e-239 clpC O ATPase family associated with various cellular activities (AAA)
LDCHJDGF_00885 4.2e-71 rrmA 2.1.1.187 Q Methyltransferase domain
LDCHJDGF_00886 3.1e-32 ytgB S Transglycosylase associated protein
LDCHJDGF_00887 2.4e-29 ymgJ S Transglycosylase associated protein
LDCHJDGF_00889 1.6e-279 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
LDCHJDGF_00890 0.0 cadA P E1-E2 ATPase
LDCHJDGF_00891 4.3e-103 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
LDCHJDGF_00892 9.7e-38 dedA S SNARE associated Golgi protein
LDCHJDGF_00893 6.2e-159 I alpha/beta hydrolase fold
LDCHJDGF_00894 0.0 pmt 2.4.1.109 GT39 O C-terminal four TMM region of protein-O-mannosyltransferase
LDCHJDGF_00895 1.1e-172 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LDCHJDGF_00896 6.6e-54
LDCHJDGF_00897 1.3e-130
LDCHJDGF_00898 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LDCHJDGF_00899 0.0 mdlA2 V ABC transporter
LDCHJDGF_00900 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LDCHJDGF_00902 7.1e-117 pdtaR T Response regulator receiver domain protein
LDCHJDGF_00903 2.6e-120 aspA 3.6.1.13 L NUDIX domain
LDCHJDGF_00905 1.4e-275 pyk 2.7.1.40 G Pyruvate kinase
LDCHJDGF_00906 3.8e-108 terC P Integral membrane protein, TerC family
LDCHJDGF_00907 4.9e-229 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
LDCHJDGF_00908 8.6e-139 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
LDCHJDGF_00909 8.9e-234 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LDCHJDGF_00910 1.7e-234 M Glycosyl transferase 4-like domain
LDCHJDGF_00911 9.4e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
LDCHJDGF_00913 2.7e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LDCHJDGF_00914 2.5e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LDCHJDGF_00915 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LDCHJDGF_00916 1.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LDCHJDGF_00917 7.7e-123 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LDCHJDGF_00918 2.6e-95
LDCHJDGF_00919 5.1e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LDCHJDGF_00920 9.5e-80 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LDCHJDGF_00921 8.3e-240 carA 6.3.5.5 F Belongs to the CarA family
LDCHJDGF_00922 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
LDCHJDGF_00923 8.9e-181 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LDCHJDGF_00924 1.2e-114 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LDCHJDGF_00925 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
LDCHJDGF_00926 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LDCHJDGF_00927 3.1e-215 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LDCHJDGF_00928 2.5e-255 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
LDCHJDGF_00929 8.5e-60 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LDCHJDGF_00930 6e-171 2.4.1.303 GT2 M Glycosyl transferase family 2
LDCHJDGF_00932 2.9e-198 TTHA0885 S Glycosyltransferase, group 2 family protein
LDCHJDGF_00933 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
LDCHJDGF_00934 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
LDCHJDGF_00935 0.0 glfT 2.4.1.288 GT2 S Glycosyltransferase like family 2
LDCHJDGF_00936 5.4e-177 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
LDCHJDGF_00937 0.0 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
LDCHJDGF_00938 7.9e-187 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
LDCHJDGF_00939 1.4e-56 S Leucine-rich repeat (LRR) protein
LDCHJDGF_00940 1.1e-100 M hydrolase, family 25
LDCHJDGF_00941 5.9e-134
LDCHJDGF_00942 4.7e-265 S Polysaccharide pyruvyl transferase
LDCHJDGF_00943 1.6e-271 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
LDCHJDGF_00944 1.1e-150 rgpC U Transport permease protein
LDCHJDGF_00945 0.0 2.4.1.288 GT2 S Glycosyltransferase like family 2
LDCHJDGF_00947 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDCHJDGF_00948 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LDCHJDGF_00949 0.0 S Psort location Cytoplasmic, score 8.87
LDCHJDGF_00950 9.6e-250 V ABC transporter permease
LDCHJDGF_00951 1.6e-194 V ABC transporter
LDCHJDGF_00952 3.2e-152 3.6.1.11, 3.6.1.40 T HD domain
LDCHJDGF_00953 3.3e-169 S Glutamine amidotransferase domain
LDCHJDGF_00954 0.0 kup P Transport of potassium into the cell
LDCHJDGF_00955 1.7e-184 tatD L TatD related DNase
LDCHJDGF_00956 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
LDCHJDGF_00957 3.6e-118
LDCHJDGF_00958 0.0 yknV V ABC transporter
LDCHJDGF_00959 5.9e-38 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
LDCHJDGF_00960 6.2e-42 hup L Belongs to the bacterial histone-like protein family
LDCHJDGF_00961 0.0 S Lysylphosphatidylglycerol synthase TM region
LDCHJDGF_00962 3e-281 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
LDCHJDGF_00963 2.1e-293 S PGAP1-like protein
LDCHJDGF_00965 3.6e-87
LDCHJDGF_00966 9.3e-181 S von Willebrand factor (vWF) type A domain
LDCHJDGF_00967 6.3e-196 S von Willebrand factor (vWF) type A domain
LDCHJDGF_00968 4.5e-83
LDCHJDGF_00969 9.8e-180 S Protein of unknown function DUF58
LDCHJDGF_00970 4.2e-192 moxR S ATPase family associated with various cellular activities (AAA)
LDCHJDGF_00971 1.5e-140 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LDCHJDGF_00972 3.7e-80 S LytR cell envelope-related transcriptional attenuator
LDCHJDGF_00973 1.8e-33 cspA K 'Cold-shock' DNA-binding domain
LDCHJDGF_00974 3.5e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LDCHJDGF_00975 9.9e-183
LDCHJDGF_00976 1.1e-181
LDCHJDGF_00977 1.4e-154 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
LDCHJDGF_00978 9.1e-141 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
LDCHJDGF_00979 2e-49 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LDCHJDGF_00980 3.5e-285 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LDCHJDGF_00981 7.7e-166 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LDCHJDGF_00982 2.7e-310 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LDCHJDGF_00983 8.8e-153 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDCHJDGF_00984 1e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LDCHJDGF_00985 1.4e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LDCHJDGF_00986 1e-145 atpB C it plays a direct role in the translocation of protons across the membrane
LDCHJDGF_00987 1.1e-205 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LDCHJDGF_00988 7.1e-259 EGP Major facilitator Superfamily
LDCHJDGF_00989 2.1e-182 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
LDCHJDGF_00990 3.2e-57
LDCHJDGF_00991 7.2e-254 wcoI DM Psort location CytoplasmicMembrane, score
LDCHJDGF_00992 0.0 pflA S Protein of unknown function (DUF4012)
LDCHJDGF_00993 1.3e-102 3.1.3.48 T Low molecular weight phosphatase family
LDCHJDGF_00994 7.1e-272 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
LDCHJDGF_00995 0.0 fadD 6.2.1.3 I long-chain-fatty acid CoA ligase
LDCHJDGF_00996 0.0 cydD V ABC transporter transmembrane region
LDCHJDGF_00997 3e-204 S EpsG family
LDCHJDGF_00998 2.6e-160 GT2 S Glycosyl transferase family 2
LDCHJDGF_00999 2e-86 amt U Ammonium Transporter Family
LDCHJDGF_01000 4.5e-55 glnB K Nitrogen regulatory protein P-II
LDCHJDGF_01001 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
LDCHJDGF_01002 2.4e-38 K sequence-specific DNA binding
LDCHJDGF_01003 9.8e-258 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LDCHJDGF_01004 1.8e-284 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
LDCHJDGF_01005 9.7e-143 cobQ S CobB/CobQ-like glutamine amidotransferase domain
LDCHJDGF_01006 1.7e-52 S granule-associated protein
LDCHJDGF_01007 0.0 ubiB S ABC1 family
LDCHJDGF_01008 1.1e-200 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
LDCHJDGF_01009 1e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LDCHJDGF_01010 2e-129
LDCHJDGF_01011 7.3e-205 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
LDCHJDGF_01012 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LDCHJDGF_01013 1.2e-77 cpaE D bacterial-type flagellum organization
LDCHJDGF_01014 1.3e-229 cpaF U Type II IV secretion system protein
LDCHJDGF_01015 2.9e-107 U Type ii secretion system
LDCHJDGF_01016 3.7e-111 U Type II secretion system (T2SS), protein F
LDCHJDGF_01017 1.7e-39 S Protein of unknown function (DUF4244)
LDCHJDGF_01018 6.5e-50 U TadE-like protein
LDCHJDGF_01019 2.5e-75 S TIGRFAM helicase secretion neighborhood TadE-like protein
LDCHJDGF_01020 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
LDCHJDGF_01021 6.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LDCHJDGF_01022 6.9e-136 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
LDCHJDGF_01023 2.1e-97 askB 1.1.1.3, 2.7.2.4 E ACT domain
LDCHJDGF_01024 1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LDCHJDGF_01025 5.4e-121
LDCHJDGF_01026 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LDCHJDGF_01027 7.1e-65 S Vitamin K epoxide reductase
LDCHJDGF_01028 1.7e-167 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
LDCHJDGF_01029 2.5e-17 S Protein of unknown function (DUF3107)
LDCHJDGF_01030 2.7e-266 mphA S Aminoglycoside phosphotransferase
LDCHJDGF_01031 3.4e-302 uvrD2 3.6.4.12 L DNA helicase
LDCHJDGF_01032 1.7e-259 S Zincin-like metallopeptidase
LDCHJDGF_01033 1.2e-182 lon T Belongs to the peptidase S16 family
LDCHJDGF_01034 9.1e-74 S Protein of unknown function (DUF3052)
LDCHJDGF_01035 4.1e-81
LDCHJDGF_01037 1.2e-283 2.7.11.1 NU Tfp pilus assembly protein FimV
LDCHJDGF_01038 7e-220 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
LDCHJDGF_01039 2.4e-228 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LDCHJDGF_01040 0.0 I acetylesterase activity
LDCHJDGF_01041 5.7e-132 recO L Involved in DNA repair and RecF pathway recombination
LDCHJDGF_01042 1.7e-153 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LDCHJDGF_01044 4.7e-235 iunH1 3.2.2.1 F nucleoside hydrolase
LDCHJDGF_01045 1.2e-194 P NMT1/THI5 like
LDCHJDGF_01046 5.4e-147 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
LDCHJDGF_01047 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
LDCHJDGF_01048 3.6e-249 lacY P LacY proton/sugar symporter
LDCHJDGF_01049 1e-201 K helix_turn _helix lactose operon repressor
LDCHJDGF_01050 5.1e-60 S Thiamine-binding protein
LDCHJDGF_01051 8.1e-293 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
LDCHJDGF_01052 1.1e-98 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LDCHJDGF_01053 2.6e-296 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
LDCHJDGF_01054 2.6e-249 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LDCHJDGF_01055 1e-221 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LDCHJDGF_01056 1.3e-79 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LDCHJDGF_01057 9.9e-43 yggT S YGGT family
LDCHJDGF_01058 4.4e-33 tccB2 V DivIVA protein
LDCHJDGF_01059 1.7e-96 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LDCHJDGF_01060 2.2e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
LDCHJDGF_01062 2.5e-291 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
LDCHJDGF_01063 4e-164 E ABC transporter, substrate-binding protein, family 5
LDCHJDGF_01064 4.7e-155 dppB EP Binding-protein-dependent transport system inner membrane component
LDCHJDGF_01065 4.4e-172 dppC EP N-terminal TM domain of oligopeptide transport permease C
LDCHJDGF_01066 0.0 dppD P Belongs to the ABC transporter superfamily
LDCHJDGF_01067 9.8e-118
LDCHJDGF_01068 4.8e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
LDCHJDGF_01069 3.3e-155 S Protein of unknown function (DUF3710)
LDCHJDGF_01070 1.7e-137 S Protein of unknown function (DUF3159)
LDCHJDGF_01071 7.2e-258 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LDCHJDGF_01072 7e-104
LDCHJDGF_01073 5.8e-176 yfdV S Membrane transport protein
LDCHJDGF_01074 5.7e-310 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
LDCHJDGF_01075 1.2e-26 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
LDCHJDGF_01076 1.2e-286 eriC P Voltage gated chloride channel
LDCHJDGF_01077 0.0 M domain protein
LDCHJDGF_01078 0.0 K RNA polymerase II activating transcription factor binding
LDCHJDGF_01079 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
LDCHJDGF_01080 2.2e-93 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LDCHJDGF_01081 9e-153
LDCHJDGF_01082 1.4e-150 KT Transcriptional regulatory protein, C terminal
LDCHJDGF_01083 7.7e-140 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LDCHJDGF_01084 1.8e-303 E Bacterial extracellular solute-binding proteins, family 5 Middle
LDCHJDGF_01085 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LDCHJDGF_01086 5.4e-104 K helix_turn_helix ASNC type
LDCHJDGF_01087 1e-63 tyrA 5.4.99.5 E Chorismate mutase type II
LDCHJDGF_01088 0.0 S domain protein
LDCHJDGF_01089 2.8e-311 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LDCHJDGF_01090 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
LDCHJDGF_01091 7.4e-52 S Protein of unknown function (DUF2469)
LDCHJDGF_01092 5.1e-198 2.3.1.57 J Acetyltransferase (GNAT) domain
LDCHJDGF_01093 6e-285 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDCHJDGF_01094 4.1e-154 plsC2 2.3.1.51 I Phosphate acyltransferases
LDCHJDGF_01095 1.4e-160 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
LDCHJDGF_01096 2.8e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LDCHJDGF_01098 2.9e-30 terC P Integral membrane protein, TerC family
LDCHJDGF_01099 2.6e-26 terC P Integral membrane protein, TerC family
LDCHJDGF_01100 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LDCHJDGF_01101 3.8e-119 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LDCHJDGF_01102 1.1e-267
LDCHJDGF_01103 3.1e-164 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LDCHJDGF_01104 7.3e-186 P Zinc-uptake complex component A periplasmic
LDCHJDGF_01105 5.1e-170 znuC P ATPases associated with a variety of cellular activities
LDCHJDGF_01106 1.7e-143 znuB U ABC 3 transport family
LDCHJDGF_01107 1.9e-89 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
LDCHJDGF_01108 6.6e-102 carD K CarD-like/TRCF domain
LDCHJDGF_01109 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LDCHJDGF_01110 8.2e-131 T Response regulator receiver domain protein
LDCHJDGF_01111 1.2e-202 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDCHJDGF_01112 1.3e-145 ctsW S Phosphoribosyl transferase domain
LDCHJDGF_01113 7.9e-154 cof 5.2.1.8 T Eukaryotic phosphomannomutase
LDCHJDGF_01114 5.6e-55 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
LDCHJDGF_01115 3.1e-276
LDCHJDGF_01116 0.0 S Glycosyl transferase, family 2
LDCHJDGF_01117 5.4e-238 K Cell envelope-related transcriptional attenuator domain
LDCHJDGF_01118 3.5e-185 K Cell envelope-related transcriptional attenuator domain
LDCHJDGF_01119 1.5e-247 D FtsK/SpoIIIE family
LDCHJDGF_01120 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
LDCHJDGF_01121 1.7e-284 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDCHJDGF_01122 8.8e-135 yplQ S Haemolysin-III related
LDCHJDGF_01123 1.2e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LDCHJDGF_01124 1.1e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
LDCHJDGF_01125 2.2e-287 sdaA 4.3.1.17 E Serine dehydratase alpha chain
LDCHJDGF_01126 1e-105
LDCHJDGF_01128 2.6e-170 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
LDCHJDGF_01129 1.4e-110 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
LDCHJDGF_01130 5.6e-98 divIC D Septum formation initiator
LDCHJDGF_01131 4.8e-31 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LDCHJDGF_01132 6.8e-262 EGP Major facilitator Superfamily
LDCHJDGF_01133 2.6e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
LDCHJDGF_01134 7.1e-175
LDCHJDGF_01135 7.6e-100 S GtrA-like protein
LDCHJDGF_01136 2.2e-198 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
LDCHJDGF_01137 6e-63 S Macrophage migration inhibitory factor (MIF)
LDCHJDGF_01138 4.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
LDCHJDGF_01139 1.9e-222 S Domain of unknown function (DUF4143)
LDCHJDGF_01140 0.0 pepD E Peptidase family C69
LDCHJDGF_01141 0.0 pepD E Peptidase family C69
LDCHJDGF_01142 8.6e-141 S Phosphatidylethanolamine-binding protein
LDCHJDGF_01143 1.1e-40 holB 2.7.7.7 L DNA polymerase III
LDCHJDGF_01144 1.8e-59 E ABC transporter, substrate-binding protein, family 5
LDCHJDGF_01145 6.2e-179 xerC D Belongs to the 'phage' integrase family. XerC subfamily
LDCHJDGF_01146 3.4e-149 V ABC transporter, ATP-binding protein
LDCHJDGF_01147 0.0 MV MacB-like periplasmic core domain
LDCHJDGF_01149 1.4e-64 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
LDCHJDGF_01150 5.7e-123 3.6.1.13 L NUDIX domain
LDCHJDGF_01151 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LDCHJDGF_01152 2.4e-231 ykiI
LDCHJDGF_01154 4e-267 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LDCHJDGF_01155 5.7e-233 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LDCHJDGF_01156 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LDCHJDGF_01157 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
LDCHJDGF_01158 3.3e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LDCHJDGF_01159 1.3e-69 K sequence-specific DNA binding
LDCHJDGF_01160 4.6e-177 insH6 L Transposase domain (DUF772)
LDCHJDGF_01161 0.0 tetP J elongation factor G
LDCHJDGF_01162 2e-64 S AAA domain
LDCHJDGF_01163 1e-107 adk 2.7.4.3 F adenylate kinase activity
LDCHJDGF_01164 3.9e-71 K Acetyltransferase (GNAT) family
LDCHJDGF_01165 3.4e-160 E -acetyltransferase
LDCHJDGF_01166 1.4e-50 4.2.99.21 E Chorismate mutase type II
LDCHJDGF_01167 2.3e-141
LDCHJDGF_01168 7.7e-183
LDCHJDGF_01169 2.2e-190 K Helix-turn-helix XRE-family like proteins
LDCHJDGF_01170 3e-289 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LDCHJDGF_01171 4.9e-206 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LDCHJDGF_01172 3.9e-184 GT2 M Glycosyl transferase family 2
LDCHJDGF_01173 1.1e-267 S Psort location CytoplasmicMembrane, score 9.99
LDCHJDGF_01174 1.3e-170 S Glycosyl transferase family 2
LDCHJDGF_01175 5.3e-192 S Glycosyltransferase like family 2
LDCHJDGF_01176 4.9e-254
LDCHJDGF_01177 5.3e-172 GT2 S Glycosyl transferase family 2
LDCHJDGF_01178 1.5e-146 M Domain of unknown function (DUF4422)
LDCHJDGF_01179 3.7e-165 rfbN GT2 S Glycosyltransferase like family 2
LDCHJDGF_01180 3.2e-183 MA20_43635 M Capsular polysaccharide synthesis protein
LDCHJDGF_01181 4.2e-239 1.1.1.22 M UDP binding domain
LDCHJDGF_01182 3.1e-254 S Psort location CytoplasmicMembrane, score 9.99
LDCHJDGF_01183 4.1e-197 M transferase activity, transferring glycosyl groups
LDCHJDGF_01184 9.8e-163 GT2 S Glycosyl transferase family 2
LDCHJDGF_01185 1.6e-288 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
LDCHJDGF_01186 1.5e-45
LDCHJDGF_01187 0.0 EGP Major facilitator Superfamily
LDCHJDGF_01188 1.3e-241 mntH P H( )-stimulated, divalent metal cation uptake system
LDCHJDGF_01189 1.4e-256 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LDCHJDGF_01190 6.2e-90 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
LDCHJDGF_01191 9.5e-155 IQ Enoyl-(Acyl carrier protein) reductase
LDCHJDGF_01192 3e-284 argH 4.3.2.1 E argininosuccinate lyase
LDCHJDGF_01193 3.2e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
LDCHJDGF_01194 1.4e-90 argR K Regulates arginine biosynthesis genes
LDCHJDGF_01195 2.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LDCHJDGF_01196 3.4e-241 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
LDCHJDGF_01197 3.3e-180 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
LDCHJDGF_01198 5.1e-207 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LDCHJDGF_01199 6.5e-204 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LDCHJDGF_01200 1.8e-147
LDCHJDGF_01201 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
LDCHJDGF_01202 2.3e-177 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LDCHJDGF_01203 8.7e-170 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LDCHJDGF_01204 7.1e-16 V FtsX-like permease family
LDCHJDGF_01205 3.4e-218 V FtsX-like permease family
LDCHJDGF_01206 4.8e-131 V ABC transporter, ATP-binding protein
LDCHJDGF_01207 5.8e-52 cbiQ P ATPases associated with a variety of cellular activities
LDCHJDGF_01208 6.7e-09 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LDCHJDGF_01209 3.7e-232 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
LDCHJDGF_01211 8.7e-34 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LDCHJDGF_01212 8.4e-134 nusG K Participates in transcription elongation, termination and antitermination
LDCHJDGF_01213 1.5e-71 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LDCHJDGF_01214 6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LDCHJDGF_01215 8.4e-145 QT PucR C-terminal helix-turn-helix domain
LDCHJDGF_01216 5.6e-169 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
LDCHJDGF_01217 2.6e-104 bioY S BioY family
LDCHJDGF_01218 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
LDCHJDGF_01219 3.1e-303 pccB I Carboxyl transferase domain
LDCHJDGF_01220 3.9e-120 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
LDCHJDGF_01221 6.5e-42 S Proteins of 100 residues with WXG
LDCHJDGF_01222 5e-134
LDCHJDGF_01223 2.4e-133 KT Response regulator receiver domain protein
LDCHJDGF_01224 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LDCHJDGF_01225 1.2e-79 cspB K 'Cold-shock' DNA-binding domain
LDCHJDGF_01226 8.2e-210 S Protein of unknown function (DUF3027)
LDCHJDGF_01227 7.3e-117
LDCHJDGF_01228 5.6e-183 uspA T Belongs to the universal stress protein A family
LDCHJDGF_01229 3.9e-214 clpC O ATPase family associated with various cellular activities (AAA)
LDCHJDGF_01230 8.7e-124 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
LDCHJDGF_01231 1.7e-35
LDCHJDGF_01232 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LDCHJDGF_01233 4.6e-263 ctpE P E1-E2 ATPase
LDCHJDGF_01234 6.8e-15 EGP Major Facilitator Superfamily
LDCHJDGF_01235 5e-168 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
LDCHJDGF_01236 1.1e-197 K helix_turn _helix lactose operon repressor
LDCHJDGF_01237 3e-248 lhr L DEAD DEAH box helicase
LDCHJDGF_01238 2.4e-136 lhr L DEAD DEAH box helicase
LDCHJDGF_01239 2.2e-68 G Major facilitator superfamily
LDCHJDGF_01240 4.7e-69 G Major facilitator superfamily
LDCHJDGF_01241 1.2e-219 G Major Facilitator Superfamily
LDCHJDGF_01242 2.3e-226 2.4.1.345 GT4 M Glycosyl transferase 4-like domain
LDCHJDGF_01243 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
LDCHJDGF_01244 1.6e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LDCHJDGF_01245 4e-130
LDCHJDGF_01246 2.7e-202 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
LDCHJDGF_01247 0.0 pknL 2.7.11.1 KLT PASTA
LDCHJDGF_01248 4.9e-139 plsC2 2.3.1.51 I Phosphate acyltransferases
LDCHJDGF_01249 2.2e-99
LDCHJDGF_01250 6.9e-195 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LDCHJDGF_01251 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LDCHJDGF_01252 7.1e-124 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LDCHJDGF_01254 2.6e-112 recX S Modulates RecA activity
LDCHJDGF_01255 1e-207 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LDCHJDGF_01256 1e-43 S Protein of unknown function (DUF3046)
LDCHJDGF_01257 8.6e-88 K Helix-turn-helix XRE-family like proteins
LDCHJDGF_01258 4.2e-107 cinA 3.5.1.42 S Belongs to the CinA family
LDCHJDGF_01259 7.7e-120 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LDCHJDGF_01260 0.0 ftsK D FtsK SpoIIIE family protein
LDCHJDGF_01261 6.8e-195 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LDCHJDGF_01262 1.1e-291 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LDCHJDGF_01263 1.3e-142 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
LDCHJDGF_01265 8.5e-198 dapB 1.4.1.12, 1.4.1.16, 1.4.1.26 S Dihydrodipicolinate reductase, N-terminus
LDCHJDGF_01266 6.1e-233 V ABC-2 family transporter protein
LDCHJDGF_01267 7.5e-236 V ABC-2 family transporter protein
LDCHJDGF_01268 4.2e-186 V ATPases associated with a variety of cellular activities
LDCHJDGF_01269 1.1e-212 T Histidine kinase
LDCHJDGF_01270 3.1e-116 K helix_turn_helix, Lux Regulon
LDCHJDGF_01271 1.6e-151 S Protein of unknown function DUF262
LDCHJDGF_01272 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
LDCHJDGF_01273 5.9e-79 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LDCHJDGF_01275 2.6e-121
LDCHJDGF_01276 3.8e-187 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
LDCHJDGF_01277 2e-49 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LDCHJDGF_01278 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
LDCHJDGF_01279 2.3e-99 lemA S LemA family
LDCHJDGF_01280 0.0 S Predicted membrane protein (DUF2207)
LDCHJDGF_01281 4.1e-186 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDCHJDGF_01282 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LDCHJDGF_01283 9.6e-79 nrdI F Probably involved in ribonucleotide reductase function
LDCHJDGF_01284 2e-42 nrdI F Probably involved in ribonucleotide reductase function
LDCHJDGF_01285 1.6e-168 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
LDCHJDGF_01286 1.8e-300 yegQ O Peptidase family U32 C-terminal domain
LDCHJDGF_01287 1e-226 yfiH Q Multi-copper polyphenol oxidoreductase laccase
LDCHJDGF_01288 2.6e-149 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
LDCHJDGF_01289 1e-133 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LDCHJDGF_01290 8.1e-84 D nuclear chromosome segregation
LDCHJDGF_01291 2.4e-269 pepC 3.4.22.40 E Peptidase C1-like family
LDCHJDGF_01292 1.2e-174 EGP Major Facilitator Superfamily
LDCHJDGF_01293 1.4e-173 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LDCHJDGF_01294 5.3e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LDCHJDGF_01295 5.9e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
LDCHJDGF_01296 2.2e-87 ssb1 L Single-stranded DNA-binding protein
LDCHJDGF_01297 1.2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LDCHJDGF_01298 2.2e-73 rplI J Binds to the 23S rRNA
LDCHJDGF_01299 5.8e-125 T Pfam Adenylate and Guanylate cyclase catalytic domain
LDCHJDGF_01303 7.6e-132 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
LDCHJDGF_01304 2.4e-181 M Protein of unknown function (DUF3152)
LDCHJDGF_01305 1.1e-197 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDCHJDGF_01306 1.7e-151 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LDCHJDGF_01307 4.6e-191 3.4.22.70 M Sortase family
LDCHJDGF_01308 0.0 Q von Willebrand factor (vWF) type A domain
LDCHJDGF_01309 3.1e-306 M domain protein
LDCHJDGF_01310 7.3e-81
LDCHJDGF_01311 4.5e-157 fahA Q Fumarylacetoacetate (FAA) hydrolase family
LDCHJDGF_01312 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LDCHJDGF_01313 2.2e-260 ydbA 3.6.3.4, 3.6.3.54 P E1-E2 ATPase
LDCHJDGF_01314 3.4e-115 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LDCHJDGF_01315 1e-153 spoU 2.1.1.185 J RNA methyltransferase TrmH family
LDCHJDGF_01316 8.4e-113 V ABC transporter
LDCHJDGF_01317 4.2e-151 S ABC-type transport system involved in multi-copper enzyme maturation permease component
LDCHJDGF_01318 4.5e-24 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LDCHJDGF_01319 1.5e-59 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LDCHJDGF_01320 2.6e-32 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LDCHJDGF_01321 1.4e-270 G Psort location CytoplasmicMembrane, score 10.00
LDCHJDGF_01322 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
LDCHJDGF_01323 9.9e-202 K Periplasmic binding protein domain
LDCHJDGF_01324 1.2e-145 cobB2 K Sir2 family
LDCHJDGF_01325 2.8e-224 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
LDCHJDGF_01326 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
LDCHJDGF_01328 9.1e-186 K Psort location Cytoplasmic, score
LDCHJDGF_01329 0.0 rafA 3.2.1.22 G Raffinose synthase or seed imbibition protein Sip1
LDCHJDGF_01330 1.5e-161 G Binding-protein-dependent transport system inner membrane component
LDCHJDGF_01331 6.8e-184 G Binding-protein-dependent transport system inner membrane component
LDCHJDGF_01332 9e-237 msmE7 G Bacterial extracellular solute-binding protein
LDCHJDGF_01333 1e-303 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
LDCHJDGF_01334 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
LDCHJDGF_01335 3.1e-218 blt G MFS/sugar transport protein
LDCHJDGF_01336 2.8e-122 K Bacterial regulatory proteins, tetR family
LDCHJDGF_01337 1e-84 dps P Belongs to the Dps family
LDCHJDGF_01338 9.1e-248 ytfL P Transporter associated domain
LDCHJDGF_01339 2.2e-128 cah 4.2.1.1 P Reversible hydration of carbon dioxide
LDCHJDGF_01340 2.4e-214 K helix_turn _helix lactose operon repressor
LDCHJDGF_01341 2e-35
LDCHJDGF_01342 2.4e-159 xylG 3.6.3.17 G ATPases associated with a variety of cellular activities
LDCHJDGF_01343 1.5e-53
LDCHJDGF_01344 1.5e-194 K helix_turn _helix lactose operon repressor
LDCHJDGF_01345 8.5e-311 3.2.1.55 GH51 G arabinose metabolic process
LDCHJDGF_01346 7.4e-305 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
LDCHJDGF_01347 5.1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
LDCHJDGF_01348 1.9e-299 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
LDCHJDGF_01349 9.1e-169 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
LDCHJDGF_01350 2.3e-139 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LDCHJDGF_01351 2.4e-84 trxA2 O Tetratricopeptide repeat
LDCHJDGF_01353 9.9e-185 cbpA 2.4.1.20 GT36 G Glycosyl hydrolase 36 superfamily, catalytic domain
LDCHJDGF_01354 1e-108 P Binding-protein-dependent transport system inner membrane component
LDCHJDGF_01355 2.1e-67 psp1 3.5.99.10 J Endoribonuclease L-PSP
LDCHJDGF_01356 1.2e-290 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
LDCHJDGF_01357 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LDCHJDGF_01358 3.7e-301 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LDCHJDGF_01359 6.9e-245 hom 1.1.1.3 E Homoserine dehydrogenase
LDCHJDGF_01360 6.1e-185 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LDCHJDGF_01361 5.3e-155 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDCHJDGF_01362 7.7e-188 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LDCHJDGF_01363 3.5e-157 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
LDCHJDGF_01364 4.5e-177 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
LDCHJDGF_01365 9.1e-283 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LDCHJDGF_01366 2e-73 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
LDCHJDGF_01367 4.6e-188 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LDCHJDGF_01368 3.1e-89 yneG S Domain of unknown function (DUF4186)
LDCHJDGF_01369 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
LDCHJDGF_01370 1.5e-160 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
LDCHJDGF_01371 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LDCHJDGF_01372 1.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
LDCHJDGF_01373 2.7e-199 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LDCHJDGF_01374 3.4e-160 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
LDCHJDGF_01375 7.8e-246 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
LDCHJDGF_01376 2.6e-88 bcp 1.11.1.15 O Redoxin
LDCHJDGF_01377 4.2e-80
LDCHJDGF_01378 7.3e-96 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
LDCHJDGF_01379 2.7e-233 amyE G Bacterial extracellular solute-binding protein
LDCHJDGF_01380 2.7e-09 amyE G Bacterial extracellular solute-binding protein
LDCHJDGF_01381 1.1e-181 K Psort location Cytoplasmic, score
LDCHJDGF_01382 8.8e-156 msmF G Binding-protein-dependent transport system inner membrane component
LDCHJDGF_01383 6.1e-154 rafG G ABC transporter permease
LDCHJDGF_01384 1.1e-107 S Protein of unknown function, DUF624
LDCHJDGF_01385 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
LDCHJDGF_01386 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
LDCHJDGF_01387 8.7e-237 malE G Bacterial extracellular solute-binding protein
LDCHJDGF_01388 2.5e-269 malF G Binding-protein-dependent transport system inner membrane component
LDCHJDGF_01389 7.3e-175 malG G Binding-protein-dependent transport system inner membrane component
LDCHJDGF_01390 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LDCHJDGF_01391 3.1e-147 S HAD-hyrolase-like
LDCHJDGF_01392 1.8e-144 traX S TraX protein
LDCHJDGF_01393 1.3e-193 K Psort location Cytoplasmic, score
LDCHJDGF_01395 0.0 dnaK O Heat shock 70 kDa protein
LDCHJDGF_01396 1.2e-94 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LDCHJDGF_01397 2.1e-167 dnaJ1 O DnaJ molecular chaperone homology domain
LDCHJDGF_01398 5.4e-92 hspR K transcriptional regulator, MerR family
LDCHJDGF_01399 5.6e-129 S HAD hydrolase, family IA, variant 3
LDCHJDGF_01400 6.2e-114 K Bacterial regulatory proteins, tetR family
LDCHJDGF_01401 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
LDCHJDGF_01402 2.7e-145 S GyrI-like small molecule binding domain
LDCHJDGF_01404 2.6e-118 dedA S SNARE associated Golgi protein
LDCHJDGF_01405 2.6e-263 glnA2 6.3.1.2 E glutamine synthetase
LDCHJDGF_01406 1.2e-186 S Uncharacterized protein conserved in bacteria (DUF2252)
LDCHJDGF_01407 4.4e-132 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
LDCHJDGF_01408 2.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LDCHJDGF_01409 1e-44
LDCHJDGF_01410 4.6e-249 amyE G Bacterial extracellular solute-binding protein
LDCHJDGF_01411 8.9e-92 pssE M Glycosyltransferase family 28 C-terminal domain
LDCHJDGF_01412 1.3e-84 pssD M Oligosaccharide biosynthesis protein Alg14 like
LDCHJDGF_01413 2.5e-222 lspL 5.1.3.6 M epimerase dehydratase
LDCHJDGF_01414 1e-119 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LDCHJDGF_01415 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
LDCHJDGF_01416 7e-130 L Protein of unknown function (DUF1524)
LDCHJDGF_01417 1.8e-27 patB 4.4.1.8 E Aminotransferase, class I II
LDCHJDGF_01418 1.5e-112 M Protein of unknown function (DUF3737)
LDCHJDGF_01419 4e-265 pbuX F Permease family
LDCHJDGF_01420 3e-91 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LDCHJDGF_01421 0.0 pcrA 3.6.4.12 L DNA helicase
LDCHJDGF_01422 5.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LDCHJDGF_01423 6.8e-57 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
LDCHJDGF_01424 1.6e-128 pgm3 3.1.3.85 G Phosphoglycerate mutase family
LDCHJDGF_01425 6.3e-64 WQ51_05790 S Bacterial protein of unknown function (DUF948)
LDCHJDGF_01426 1.4e-34
LDCHJDGF_01427 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LDCHJDGF_01428 1.2e-85 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LDCHJDGF_01429 1.8e-199 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LDCHJDGF_01430 1.3e-37 3.4.23.43 S Type IV leader peptidase family
LDCHJDGF_01431 5.4e-220 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LDCHJDGF_01432 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LDCHJDGF_01433 1.8e-70 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
LDCHJDGF_01434 7.3e-191
LDCHJDGF_01435 9.9e-82
LDCHJDGF_01436 1.3e-80
LDCHJDGF_01437 8.7e-215
LDCHJDGF_01438 2e-222
LDCHJDGF_01441 7e-95 amy 3.2.1.1, 3.2.1.41 CBM48,GH13 G Alpha amylase, catalytic domain
LDCHJDGF_01442 2.8e-84 dexB 2.4.1.7, 3.2.1.20, 3.2.1.51, 3.2.1.70, 3.2.1.93, 3.2.1.97 GH101,GH13,GH29,GH31 M Aamy_C
LDCHJDGF_01443 2.1e-185 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LDCHJDGF_01444 1.7e-48 M Aamy_C
LDCHJDGF_01445 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LDCHJDGF_01446 0.0 S L,D-transpeptidase catalytic domain
LDCHJDGF_01447 1.4e-289 sufB O FeS assembly protein SufB
LDCHJDGF_01448 5.5e-228 sufD O FeS assembly protein SufD
LDCHJDGF_01449 0.0 I Psort location CytoplasmicMembrane, score 9.99
LDCHJDGF_01450 2.1e-196 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LDCHJDGF_01451 9.6e-97 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LDCHJDGF_01453 5.1e-162
LDCHJDGF_01454 3.2e-195 nusA K Participates in both transcription termination and antitermination
LDCHJDGF_01455 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LDCHJDGF_01456 6.4e-74 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LDCHJDGF_01457 5.9e-194 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LDCHJDGF_01458 7.8e-233 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
LDCHJDGF_01459 4.8e-58 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LDCHJDGF_01460 1.3e-60 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LDCHJDGF_01461 5.2e-135 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LDCHJDGF_01462 3.5e-119 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LDCHJDGF_01463 6.7e-209 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
LDCHJDGF_01464 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LDCHJDGF_01465 1.6e-190 K Psort location Cytoplasmic, score
LDCHJDGF_01466 1.1e-152 ywiC S YwiC-like protein
LDCHJDGF_01467 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
LDCHJDGF_01468 3.2e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LDCHJDGF_01469 6.8e-116 rplD J Forms part of the polypeptide exit tunnel
LDCHJDGF_01470 2.6e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LDCHJDGF_01471 1.2e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LDCHJDGF_01472 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LDCHJDGF_01473 6.7e-57 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LDCHJDGF_01474 3.9e-124 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LDCHJDGF_01475 2e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LDCHJDGF_01476 7e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
LDCHJDGF_01477 8.3e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LDCHJDGF_01478 8.7e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LDCHJDGF_01479 3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LDCHJDGF_01480 1.7e-105 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LDCHJDGF_01481 3.1e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LDCHJDGF_01482 1.9e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LDCHJDGF_01483 2.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LDCHJDGF_01484 1.3e-58 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LDCHJDGF_01485 8.2e-94 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LDCHJDGF_01486 2.5e-23 rpmD J Ribosomal protein L30p/L7e
LDCHJDGF_01487 7.4e-77 rplO J binds to the 23S rRNA
LDCHJDGF_01488 1.5e-250 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LDCHJDGF_01489 3.2e-101 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LDCHJDGF_01490 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LDCHJDGF_01491 6.5e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LDCHJDGF_01492 2.1e-61 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LDCHJDGF_01493 5.7e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LDCHJDGF_01494 5.2e-184 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LDCHJDGF_01495 1e-70 rplQ J Ribosomal protein L17
LDCHJDGF_01496 0.0 lysX S Uncharacterised conserved protein (DUF2156)
LDCHJDGF_01497 1.7e-265 S Putative esterase
LDCHJDGF_01498 2.2e-240 purD 6.3.4.13 F Belongs to the GARS family
LDCHJDGF_01499 3.3e-197 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
LDCHJDGF_01500 3e-303 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LDCHJDGF_01501 5.7e-280 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
LDCHJDGF_01502 1.7e-72
LDCHJDGF_01503 7.3e-215 S 50S ribosome-binding GTPase
LDCHJDGF_01504 6.9e-101
LDCHJDGF_01505 2.7e-89 S Pyridoxamine 5'-phosphate oxidase
LDCHJDGF_01506 1.4e-107 2.7.1.196, 2.7.1.205 K sequence-specific DNA binding
LDCHJDGF_01508 1e-226
LDCHJDGF_01509 2.8e-126
LDCHJDGF_01510 2.1e-68
LDCHJDGF_01511 1.8e-107
LDCHJDGF_01512 9.9e-209 S Short C-terminal domain
LDCHJDGF_01513 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
LDCHJDGF_01514 2.4e-66 K helix_turn_helix gluconate operon transcriptional repressor
LDCHJDGF_01515 8.7e-167 V ATPases associated with a variety of cellular activities
LDCHJDGF_01516 3.9e-97 S ABC-2 family transporter protein
LDCHJDGF_01517 2.3e-84 proX S Aminoacyl-tRNA editing domain
LDCHJDGF_01518 1e-141 S Peptidase C26
LDCHJDGF_01519 0.0 amyA 3.2.1.1 GH13 G Glycosyl hydrolase family 70
LDCHJDGF_01520 4.2e-186 K TRANSCRIPTIONal
LDCHJDGF_01521 4.7e-179 patB 4.4.1.8 E Aminotransferase, class I II
LDCHJDGF_01522 5.1e-56 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
LDCHJDGF_01523 5.9e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
LDCHJDGF_01524 4.1e-10 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
LDCHJDGF_01525 3.2e-220 3.6.1.27 I PAP2 superfamily
LDCHJDGF_01526 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LDCHJDGF_01527 2e-109 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LDCHJDGF_01528 2.7e-224 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LDCHJDGF_01529 1.7e-184 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LDCHJDGF_01530 2.8e-82 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
LDCHJDGF_01531 6.3e-128 apl 3.1.3.1 S SNARE associated Golgi protein
LDCHJDGF_01532 1.2e-291 arc O AAA ATPase forming ring-shaped complexes
LDCHJDGF_01533 3.3e-310 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
LDCHJDGF_01534 2.4e-172 hisN 3.1.3.25 G Inositol monophosphatase family
LDCHJDGF_01535 2.5e-30 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
LDCHJDGF_01536 5e-292 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
LDCHJDGF_01537 4.3e-303
LDCHJDGF_01538 7.9e-205 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LDCHJDGF_01540 0.0 tetP J Elongation factor G, domain IV
LDCHJDGF_01541 1.9e-286 aaxC E Amino acid permease
LDCHJDGF_01542 6e-117
LDCHJDGF_01543 1.2e-27
LDCHJDGF_01544 0.0 E ABC transporter, substrate-binding protein, family 5
LDCHJDGF_01545 8.5e-260 EGP Major Facilitator Superfamily
LDCHJDGF_01546 1.6e-107 pspA KT PspA/IM30 family
LDCHJDGF_01547 4.4e-207 S COG1512 Beta-propeller domains of methanol dehydrogenase type
LDCHJDGF_01548 8e-08 L Transposase and inactivated derivatives IS30 family
LDCHJDGF_01549 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LDCHJDGF_01550 1.4e-41 QU41_18010 2.4.2.18 K Lrp/AsnC ligand binding domain
LDCHJDGF_01551 2.3e-127 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LDCHJDGF_01552 4.5e-266
LDCHJDGF_01553 5.6e-144 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
LDCHJDGF_01554 3.7e-251 S Calcineurin-like phosphoesterase
LDCHJDGF_01557 1.4e-294 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LDCHJDGF_01559 3e-212
LDCHJDGF_01560 2.9e-27
LDCHJDGF_01561 5.1e-66
LDCHJDGF_01562 2.4e-141 D ftsk spoiiie
LDCHJDGF_01563 6.5e-121 S Plasmid replication protein
LDCHJDGF_01564 1.4e-36
LDCHJDGF_01565 4.4e-224 L HNH endonuclease
LDCHJDGF_01566 1.4e-219 2.1.1.72 H Adenine-specific methyltransferase EcoRI
LDCHJDGF_01567 2.9e-229 L Phage integrase family
LDCHJDGF_01568 3.6e-265 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LDCHJDGF_01569 5.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
LDCHJDGF_01570 1.5e-39 rpmA J Ribosomal L27 protein
LDCHJDGF_01571 2.6e-132 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LDCHJDGF_01572 6.8e-150 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
LDCHJDGF_01573 4.9e-101 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LDCHJDGF_01574 6.1e-25 rpmI J Ribosomal protein L35
LDCHJDGF_01575 1.5e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LDCHJDGF_01576 4.8e-168 xerD D recombinase XerD
LDCHJDGF_01577 1.2e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
LDCHJDGF_01578 2.6e-157 nrtR 3.6.1.55 F NUDIX hydrolase
LDCHJDGF_01579 6.1e-225 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
LDCHJDGF_01580 4.5e-15 ybdD S Selenoprotein, putative
LDCHJDGF_01581 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
LDCHJDGF_01582 5.8e-32 V ABC transporter transmembrane region
LDCHJDGF_01583 9.4e-72 V (ABC) transporter
LDCHJDGF_01584 6.3e-99 S AAA domain, putative AbiEii toxin, Type IV TA system
LDCHJDGF_01586 1.5e-89 K Winged helix DNA-binding domain
LDCHJDGF_01587 1.1e-80 F Nucleoside 2-deoxyribosyltransferase
LDCHJDGF_01588 1.2e-280 aspA 4.3.1.1 E Fumarase C C-terminus
LDCHJDGF_01589 7.2e-40 feoA P FeoA
LDCHJDGF_01590 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
LDCHJDGF_01591 0.0 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LDCHJDGF_01592 1.2e-79 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LDCHJDGF_01593 2.1e-254 tnpA L Transposase
LDCHJDGF_01594 4.8e-72 zur P Belongs to the Fur family
LDCHJDGF_01595 6.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LDCHJDGF_01596 2.8e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LDCHJDGF_01597 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LDCHJDGF_01599 3.7e-221 ybiR P Citrate transporter
LDCHJDGF_01600 6.3e-293 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LDCHJDGF_01601 1.1e-23 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LDCHJDGF_01602 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
LDCHJDGF_01603 4.4e-178 yjjK S ABC transporter
LDCHJDGF_01604 1.6e-257 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
LDCHJDGF_01605 1.1e-250 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LDCHJDGF_01606 2.4e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LDCHJDGF_01607 1.8e-259 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LDCHJDGF_01608 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
LDCHJDGF_01609 8.5e-90 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LDCHJDGF_01610 9.6e-52 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LDCHJDGF_01611 3.6e-09 yfdV S Membrane transport protein
LDCHJDGF_01612 1.1e-206 3.2.1.4, 3.2.1.78 GH26,GH5,GH9 G hydrolase family 5
LDCHJDGF_01613 2.6e-95 iolT EGP Major facilitator Superfamily
LDCHJDGF_01614 7.8e-44
LDCHJDGF_01615 9.5e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
LDCHJDGF_01616 4e-69 S Protein of unknown function (DUF4235)
LDCHJDGF_01617 1.9e-115 G Phosphoglycerate mutase family
LDCHJDGF_01620 1.6e-28
LDCHJDGF_01621 6.4e-229 T AAA domain
LDCHJDGF_01625 7e-141 spoU 2.1.1.185 J SpoU rRNA Methylase family
LDCHJDGF_01626 3.1e-132 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
LDCHJDGF_01627 4e-95 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LDCHJDGF_01628 4.5e-138 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LDCHJDGF_01629 1.3e-88 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LDCHJDGF_01630 7.4e-39 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LDCHJDGF_01631 2.5e-27 P Cation efflux family
LDCHJDGF_01632 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
LDCHJDGF_01633 7.1e-161 cbiQ P ATPases associated with a variety of cellular activities
LDCHJDGF_01634 1.3e-81 rrmA 2.1.1.187 Q Methyltransferase domain
LDCHJDGF_01635 5.7e-58
LDCHJDGF_01636 8.7e-54 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LDCHJDGF_01637 7.3e-100 nadE 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDCHJDGF_01638 2.5e-258 nadE 3.5.1.53, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LDCHJDGF_01639 3e-41 relB L RelB antitoxin
LDCHJDGF_01641 3.2e-144 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LDCHJDGF_01643 2.5e-298 yjjP S Threonine/Serine exporter, ThrE
LDCHJDGF_01644 4.5e-263 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LDCHJDGF_01645 1.1e-25 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
LDCHJDGF_01646 9e-31 S Vitamin K epoxide reductase
LDCHJDGF_01647 2.2e-66 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
LDCHJDGF_01648 1.3e-32 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LDCHJDGF_01649 2.9e-40 lhr L DEAD DEAH box helicase

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)