ORF_ID e_value Gene_name EC_number CAZy COGs Description
NBOGDFMD_00001 1.1e-151 V MatE
NBOGDFMD_00003 1.5e-109 C Fe-S oxidoreductases
NBOGDFMD_00004 1.2e-176 EGP Major Facilitator Superfamily
NBOGDFMD_00005 1.7e-229 I radical SAM domain protein
NBOGDFMD_00006 4.3e-19 I radical SAM domain protein
NBOGDFMD_00008 6.5e-159 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
NBOGDFMD_00009 1.5e-149 L Integrase core domain protein
NBOGDFMD_00010 6.1e-18 L transposase activity
NBOGDFMD_00011 8.1e-54 L transposase activity
NBOGDFMD_00013 3.9e-92
NBOGDFMD_00014 0.0 sbcC L ATPase involved in DNA repair
NBOGDFMD_00015 6.9e-231 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
NBOGDFMD_00016 0.0 lacL 3.2.1.23 G -beta-galactosidase
NBOGDFMD_00017 0.0 lacS G transporter
NBOGDFMD_00018 2.6e-202 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
NBOGDFMD_00019 6.6e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NBOGDFMD_00020 8e-290 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
NBOGDFMD_00021 6.9e-220 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NBOGDFMD_00022 2.3e-184 galR K Transcriptional regulator
NBOGDFMD_00023 2.7e-08 L Integrase core domain protein
NBOGDFMD_00024 1.2e-25 L transposition
NBOGDFMD_00025 3.5e-228 zmpB M M26 IgA1-specific Metallo-endopeptidase C-terminal region
NBOGDFMD_00026 6.7e-17 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
NBOGDFMD_00027 2.5e-101 V abc transporter atp-binding protein
NBOGDFMD_00028 4.3e-40 V abc transporter atp-binding protein
NBOGDFMD_00029 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
NBOGDFMD_00030 6.4e-62 L Transposase
NBOGDFMD_00031 7e-150 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
NBOGDFMD_00032 1.8e-33 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
NBOGDFMD_00033 1.7e-120 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
NBOGDFMD_00034 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
NBOGDFMD_00035 5.9e-188 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
NBOGDFMD_00036 7.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
NBOGDFMD_00037 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NBOGDFMD_00040 2.2e-114 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
NBOGDFMD_00041 5.8e-175 vraS 2.7.13.3 T Histidine kinase
NBOGDFMD_00042 3.7e-120 yvqF KT membrane
NBOGDFMD_00043 7e-307 prkC 2.7.11.1 KLT serine threonine protein kinase
NBOGDFMD_00044 2e-132 stp 3.1.3.16 T phosphatase
NBOGDFMD_00045 1.3e-246 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NBOGDFMD_00046 2.5e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NBOGDFMD_00047 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NBOGDFMD_00048 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
NBOGDFMD_00049 9.8e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
NBOGDFMD_00050 2.8e-212 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NBOGDFMD_00051 6.9e-150 XK27_02985 S overlaps another CDS with the same product name
NBOGDFMD_00052 2.1e-148 supH S overlaps another CDS with the same product name
NBOGDFMD_00053 8.6e-63 yvoA_1 K Transcriptional
NBOGDFMD_00054 2.8e-120 skfE V abc transporter atp-binding protein
NBOGDFMD_00055 3.3e-133 V ATPase activity
NBOGDFMD_00056 4.3e-172 oppF P Belongs to the ABC transporter superfamily
NBOGDFMD_00057 2.2e-204 oppD P Belongs to the ABC transporter superfamily
NBOGDFMD_00058 4.9e-168 amiD P ABC transporter (Permease
NBOGDFMD_00059 4.2e-278 amiC P ABC transporter (Permease
NBOGDFMD_00060 0.0 amiA E ABC transporter, substrate-binding protein, family 5
NBOGDFMD_00061 1.6e-224 L Transposase
NBOGDFMD_00062 0.0 amiA E ABC transporter, substrate-binding protein, family 5
NBOGDFMD_00063 8.1e-45 L Transposase
NBOGDFMD_00064 4.1e-158 L COG2801 Transposase and inactivated derivatives
NBOGDFMD_00065 1.2e-24 oppF P Belongs to the ABC transporter superfamily
NBOGDFMD_00066 3.8e-45 oppF P Belongs to the ABC transporter superfamily
NBOGDFMD_00067 1.4e-40 tatD L Hydrolase, tatd
NBOGDFMD_00068 6.7e-218 oxlT P COG0477 Permeases of the major facilitator superfamily
NBOGDFMD_00069 1e-94 L Integrase core domain protein
NBOGDFMD_00070 7.2e-66 L Transposase
NBOGDFMD_00071 1.4e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
NBOGDFMD_00072 8.3e-173 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
NBOGDFMD_00073 5.4e-150 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NBOGDFMD_00074 5.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
NBOGDFMD_00075 1.5e-103 yjbK S Adenylate cyclase
NBOGDFMD_00076 2.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NBOGDFMD_00077 7e-206 iscS 2.8.1.7 E Cysteine desulfurase
NBOGDFMD_00078 2e-58 XK27_04120 S Putative amino acid metabolism
NBOGDFMD_00079 1.5e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NBOGDFMD_00080 3.9e-130 puuD T peptidase C26
NBOGDFMD_00081 2.4e-119 radC E Belongs to the UPF0758 family
NBOGDFMD_00082 0.0 rgpF M Rhamnan synthesis protein F
NBOGDFMD_00083 1.1e-179 rgpEc GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
NBOGDFMD_00084 8.7e-226 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
NBOGDFMD_00085 1.4e-142 rgpC GM Transport permease protein
NBOGDFMD_00086 1.4e-178 rgpB GT2 M Glycosyltransferase, group 2 family protein
NBOGDFMD_00087 1.2e-224 rgpA GT4 M Domain of unknown function (DUF1972)
NBOGDFMD_00088 6e-139 S Predicted membrane protein (DUF2142)
NBOGDFMD_00089 1.6e-127 2.7.8.12 M transferase activity, transferring glycosyl groups
NBOGDFMD_00090 1.8e-213 amrA S polysaccharide biosynthetic process
NBOGDFMD_00091 5.3e-48 XK27_09090 S Uncharacterized conserved protein (DUF2304)
NBOGDFMD_00092 1.9e-124 ycbB S Glycosyl transferase family 2
NBOGDFMD_00093 4e-161 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
NBOGDFMD_00094 4.1e-245
NBOGDFMD_00095 4e-170 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
NBOGDFMD_00096 1.3e-54 yitW K metal-sulfur cluster biosynthetic enzyme
NBOGDFMD_00097 1.1e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NBOGDFMD_00098 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NBOGDFMD_00099 5.5e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
NBOGDFMD_00100 1.6e-135 gltS ET Belongs to the bacterial solute-binding protein 3 family
NBOGDFMD_00101 4e-201 arcT 2.6.1.1 E Aminotransferase
NBOGDFMD_00102 9.4e-136 ET ABC transporter
NBOGDFMD_00103 3.7e-143 ET Belongs to the bacterial solute-binding protein 3 family
NBOGDFMD_00104 2.9e-84 mutT 3.6.1.55 F Nudix family
NBOGDFMD_00105 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NBOGDFMD_00107 1.2e-55 V CAAX protease self-immunity
NBOGDFMD_00108 7.6e-32 S CAAX amino terminal protease family protein
NBOGDFMD_00109 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
NBOGDFMD_00110 1.8e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
NBOGDFMD_00111 1.1e-16 XK27_00735
NBOGDFMD_00112 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NBOGDFMD_00114 7.3e-135 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NBOGDFMD_00117 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
NBOGDFMD_00118 6.6e-30 ycaO O OsmC-like protein
NBOGDFMD_00120 1.7e-154 EG Permeases of the drug metabolite transporter (DMT) superfamily
NBOGDFMD_00122 5.6e-110 csn2 S CRISPR-associated protein (Cas_Csn2)
NBOGDFMD_00123 3.5e-52 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NBOGDFMD_00124 1.5e-163 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NBOGDFMD_00125 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
NBOGDFMD_00126 6.7e-116 serB 3.1.3.3 E phosphoserine phosphatase
NBOGDFMD_00127 3.2e-298 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
NBOGDFMD_00128 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NBOGDFMD_00129 2.6e-109 3.1.3.18 S IA, variant 1
NBOGDFMD_00130 2.5e-116 lrgB M effector of murein hydrolase
NBOGDFMD_00131 7.7e-56 lrgA S Effector of murein hydrolase LrgA
NBOGDFMD_00133 6.4e-60 arsC 1.20.4.1 P Belongs to the ArsC family
NBOGDFMD_00134 3.1e-56 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
NBOGDFMD_00135 7e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NBOGDFMD_00136 3.9e-104 wecD M Acetyltransferase GNAT family
NBOGDFMD_00137 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NBOGDFMD_00138 5.1e-96 GK ROK family
NBOGDFMD_00139 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
NBOGDFMD_00140 5.1e-47 XK27_08050 O stress-induced mitochondrial fusion
NBOGDFMD_00141 1.3e-19 XK27_08050 O HflC and HflK could regulate a protease
NBOGDFMD_00142 2.3e-206 potD P spermidine putrescine ABC transporter
NBOGDFMD_00143 3e-134 potC P ABC-type spermidine putrescine transport system, permease component II
NBOGDFMD_00144 3.7e-140 potB P ABC-type spermidine putrescine transport system, permease component I
NBOGDFMD_00145 6.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
NBOGDFMD_00146 7.8e-171 murB 1.3.1.98 M cell wall formation
NBOGDFMD_00147 2.9e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NBOGDFMD_00148 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NBOGDFMD_00149 1.2e-298 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
NBOGDFMD_00150 7e-147 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NBOGDFMD_00151 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
NBOGDFMD_00152 0.0 ydaO E amino acid
NBOGDFMD_00153 5.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
NBOGDFMD_00154 4.1e-37 ylqC L Belongs to the UPF0109 family
NBOGDFMD_00155 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
NBOGDFMD_00156 2e-171 tehB 2.1.1.265 PQ tellurite resistance protein tehb
NBOGDFMD_00157 2.6e-157 xth 3.1.11.2 L exodeoxyribonuclease III
NBOGDFMD_00158 2.1e-74 S QueT transporter
NBOGDFMD_00159 2.5e-08 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
NBOGDFMD_00160 1.1e-89 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
NBOGDFMD_00161 5.7e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
NBOGDFMD_00162 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NBOGDFMD_00163 3.7e-85 ccl S cog cog4708
NBOGDFMD_00164 4.9e-160 rbn E Belongs to the UPF0761 family
NBOGDFMD_00165 1.5e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
NBOGDFMD_00166 3.3e-231 ytoI K transcriptional regulator containing CBS domains
NBOGDFMD_00167 2.4e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
NBOGDFMD_00168 1e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NBOGDFMD_00169 0.0 comEC S Competence protein ComEC
NBOGDFMD_00170 3e-98 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
NBOGDFMD_00171 1.7e-142 plsC 2.3.1.51 I Acyltransferase
NBOGDFMD_00172 1.8e-140 nodB3 G deacetylase
NBOGDFMD_00173 7.1e-141 yabB 2.1.1.223 L Methyltransferase
NBOGDFMD_00174 1e-41 yazA L endonuclease containing a URI domain
NBOGDFMD_00175 6.9e-239 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
NBOGDFMD_00176 6.7e-154 corA P CorA-like protein
NBOGDFMD_00177 1.9e-62 yjqA S Bacterial PH domain
NBOGDFMD_00178 7.8e-100 thiT S Thiamine transporter
NBOGDFMD_00179 2.1e-157 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
NBOGDFMD_00180 1.9e-201 yjbB G Permeases of the major facilitator superfamily
NBOGDFMD_00181 3.1e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NBOGDFMD_00182 1.4e-121 ywaF S Integral membrane protein (intg_mem_TP0381)
NBOGDFMD_00183 3e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NBOGDFMD_00187 1.1e-155 cjaA ET ABC transporter substrate-binding protein
NBOGDFMD_00188 1.4e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
NBOGDFMD_00189 1.3e-114 P ABC transporter (Permease
NBOGDFMD_00190 1e-114 papP P ABC transporter (Permease
NBOGDFMD_00191 1.7e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
NBOGDFMD_00192 4.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
NBOGDFMD_00193 0.0 copA 3.6.3.54 P P-type ATPase
NBOGDFMD_00194 2.7e-73 copY K Copper transport repressor, CopY TcrY family
NBOGDFMD_00195 2.1e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
NBOGDFMD_00196 5.4e-228 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
NBOGDFMD_00197 8.8e-99 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
NBOGDFMD_00198 2.5e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
NBOGDFMD_00199 7.8e-180 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NBOGDFMD_00200 3.6e-105 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
NBOGDFMD_00201 6.9e-256 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NBOGDFMD_00202 8.1e-42 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
NBOGDFMD_00203 1.4e-54
NBOGDFMD_00204 0.0 ctpE P E1-E2 ATPase
NBOGDFMD_00205 3.9e-26
NBOGDFMD_00206 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NBOGDFMD_00207 9.7e-28 L transposase activity
NBOGDFMD_00208 2.7e-129 K transcriptional regulator, MerR family
NBOGDFMD_00209 1.4e-104 dnaQ 2.7.7.7 L DNA polymerase III
NBOGDFMD_00210 1.2e-41 WQ51_02910 S Protein of unknown function, DUF536
NBOGDFMD_00211 4.8e-63 XK27_02560 S cog cog2151
NBOGDFMD_00212 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
NBOGDFMD_00213 7.7e-227 ytfP S Flavoprotein
NBOGDFMD_00215 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NBOGDFMD_00216 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
NBOGDFMD_00217 2.7e-183 ecsB U ABC transporter
NBOGDFMD_00218 2.3e-133 ecsA V abc transporter atp-binding protein
NBOGDFMD_00219 3.9e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
NBOGDFMD_00220 5.6e-12
NBOGDFMD_00221 2.6e-55 S CD20-like family
NBOGDFMD_00222 7.3e-107
NBOGDFMD_00223 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
NBOGDFMD_00224 6.9e-206 ylbM S Belongs to the UPF0348 family
NBOGDFMD_00225 2e-140 yqeM Q Methyltransferase domain protein
NBOGDFMD_00226 6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NBOGDFMD_00227 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
NBOGDFMD_00228 3.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NBOGDFMD_00229 3.5e-49 yhbY J RNA-binding protein
NBOGDFMD_00230 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
NBOGDFMD_00231 1.8e-98 yqeG S hydrolase of the HAD superfamily
NBOGDFMD_00232 2.6e-153 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
NBOGDFMD_00233 1.3e-57
NBOGDFMD_00234 2.3e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NBOGDFMD_00235 3.5e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NBOGDFMD_00236 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NBOGDFMD_00237 6.3e-31 M lipopolysaccharide 3-alpha-galactosyltransferase activity
NBOGDFMD_00238 4.4e-255 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
NBOGDFMD_00239 4.7e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NBOGDFMD_00240 4.8e-154 hlpA M Belongs to the NlpA lipoprotein family
NBOGDFMD_00241 6.8e-101 pncA Q isochorismatase
NBOGDFMD_00242 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
NBOGDFMD_00243 3.7e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
NBOGDFMD_00244 2.4e-75 XK27_03180 T universal stress protein
NBOGDFMD_00247 2e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NBOGDFMD_00248 7.6e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
NBOGDFMD_00249 1.2e-143 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
NBOGDFMD_00250 0.0 yjcE P NhaP-type Na H and K H antiporters
NBOGDFMD_00252 1.4e-98 ytqB 2.1.1.176 J (SAM)-dependent
NBOGDFMD_00253 1.3e-184 yhcC S radical SAM protein
NBOGDFMD_00254 2.2e-196 ylbL T Belongs to the peptidase S16 family
NBOGDFMD_00255 2.7e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NBOGDFMD_00256 2.5e-92 rsmD 2.1.1.171 L Methyltransferase
NBOGDFMD_00257 1.9e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NBOGDFMD_00258 3.2e-09 S Protein of unknown function (DUF4059)
NBOGDFMD_00259 6.5e-131 tcyN 3.6.3.21 E abc transporter atp-binding protein
NBOGDFMD_00260 4.7e-163 yxeN P ABC transporter (Permease
NBOGDFMD_00261 1.5e-152 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
NBOGDFMD_00263 3.1e-206 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NBOGDFMD_00264 0.0 pflB 2.3.1.54 C formate acetyltransferase'
NBOGDFMD_00265 1.8e-147 cah 4.2.1.1 P carbonic anhydrase
NBOGDFMD_00266 2.1e-85 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
NBOGDFMD_00267 1e-44 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
NBOGDFMD_00268 2.9e-87 D nuclear chromosome segregation
NBOGDFMD_00269 1.5e-127 ybbM S transport system, permease component
NBOGDFMD_00270 3.6e-117 ybbL S abc transporter atp-binding protein
NBOGDFMD_00271 6.5e-184 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
NBOGDFMD_00272 4.6e-140 cppA E CppA N-terminal
NBOGDFMD_00273 5e-44 V CAAX protease self-immunity
NBOGDFMD_00274 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
NBOGDFMD_00275 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
NBOGDFMD_00278 3e-47 spiA K sequence-specific DNA binding
NBOGDFMD_00279 2.9e-28 blpT
NBOGDFMD_00280 6.7e-98 blpT
NBOGDFMD_00281 2e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
NBOGDFMD_00282 3.2e-42 L Transposase
NBOGDFMD_00283 1.9e-46 L transposase activity
NBOGDFMD_00284 9e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NBOGDFMD_00285 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NBOGDFMD_00286 5.1e-130 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
NBOGDFMD_00287 3.8e-122 sdaAB 4.3.1.17 E L-serine dehydratase
NBOGDFMD_00288 6.9e-30 sdaAA 4.3.1.17 E L-serine dehydratase
NBOGDFMD_00289 4e-102 sdaAA 4.3.1.17 E L-serine dehydratase
NBOGDFMD_00290 7.4e-26
NBOGDFMD_00291 7.6e-146 S ABC-2 family transporter protein
NBOGDFMD_00292 1.1e-98 S transport system, permease component
NBOGDFMD_00293 4.4e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
NBOGDFMD_00294 2.6e-192 desK 2.7.13.3 T Histidine kinase
NBOGDFMD_00295 1.4e-133 yvfS V ABC-2 type transporter
NBOGDFMD_00296 9.7e-158 XK27_09825 V abc transporter atp-binding protein
NBOGDFMD_00300 2.3e-213 EGP Major facilitator Superfamily
NBOGDFMD_00301 0.0 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
NBOGDFMD_00302 1.2e-152 mutR K Transcriptional activator, Rgg GadR MutR family
NBOGDFMD_00303 3.9e-41 3.6.1.55 F NUDIX domain
NBOGDFMD_00305 3.7e-122 S An automated process has identified a potential problem with this gene model
NBOGDFMD_00306 6.1e-26 XK27_09825 V 'abc transporter, ATP-binding protein
NBOGDFMD_00307 1.4e-15 liaI KT membrane
NBOGDFMD_00308 2.6e-30 liaI KT membrane
NBOGDFMD_00309 4.7e-93 XK27_05000 S Fe-S-cluster oxidoreductase
NBOGDFMD_00310 0.0 V ABC transporter (permease)
NBOGDFMD_00311 1.7e-134 macB2 V ABC transporter, ATP-binding protein
NBOGDFMD_00312 1e-163 T Histidine kinase
NBOGDFMD_00313 4.6e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBOGDFMD_00314 5.9e-77 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NBOGDFMD_00315 3.3e-69 pbuX F xanthine permease
NBOGDFMD_00316 9.2e-119 pbuX F xanthine permease
NBOGDFMD_00317 1e-246 norM V Multidrug efflux pump
NBOGDFMD_00318 2.8e-187 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NBOGDFMD_00319 1.3e-235 brnQ E Component of the transport system for branched-chain amino acids
NBOGDFMD_00320 9.4e-65 manA 5.3.1.8 G mannose-6-phosphate isomerase
NBOGDFMD_00321 8.2e-57 manA 5.3.1.8 G mannose-6-phosphate isomerase
NBOGDFMD_00322 4.8e-25 csbD K CsbD-like
NBOGDFMD_00323 6.2e-228 yfnA E amino acid
NBOGDFMD_00324 5.1e-110 XK27_02070 S nitroreductase
NBOGDFMD_00325 9.5e-150 1.13.11.2 S glyoxalase
NBOGDFMD_00326 5.6e-77 ywnA K Transcriptional regulator
NBOGDFMD_00327 9.5e-158 E Alpha/beta hydrolase of unknown function (DUF915)
NBOGDFMD_00328 1.9e-231 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NBOGDFMD_00329 1.4e-110 drgA C Nitroreductase
NBOGDFMD_00330 3e-102 yoaK S Protein of unknown function (DUF1275)
NBOGDFMD_00331 1.2e-160 yvgN C reductase
NBOGDFMD_00332 1e-181 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NBOGDFMD_00333 1.5e-283 XK27_07020 S Belongs to the UPF0371 family
NBOGDFMD_00335 4.8e-55 K response regulator
NBOGDFMD_00336 9.3e-72 S Signal peptide protein, YSIRK family
NBOGDFMD_00337 4.5e-61
NBOGDFMD_00338 5.5e-272 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NBOGDFMD_00339 1.9e-35
NBOGDFMD_00340 5.3e-12 IQ PFAM AMP-dependent synthetase and ligase
NBOGDFMD_00341 2.7e-12 IQ PFAM AMP-dependent synthetase and ligase
NBOGDFMD_00342 5.8e-109 MA20_06410 E LysE type translocator
NBOGDFMD_00343 5.6e-08
NBOGDFMD_00344 2.7e-09
NBOGDFMD_00345 0.0 M family 8
NBOGDFMD_00346 4e-19 K negative regulation of transcription, DNA-templated
NBOGDFMD_00347 1.7e-23 K negative regulation of transcription, DNA-templated
NBOGDFMD_00349 3.1e-19 XK27_06920 S Protein of unknown function (DUF1700)
NBOGDFMD_00350 1.8e-88 S Putative adhesin
NBOGDFMD_00351 3.9e-161 XK27_06930 V domain protein
NBOGDFMD_00352 6.4e-96 XK27_06935 K transcriptional regulator
NBOGDFMD_00353 4.8e-55 ypaA M Membrane
NBOGDFMD_00354 2.7e-08
NBOGDFMD_00355 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NBOGDFMD_00356 8.2e-48 veg S Biofilm formation stimulator VEG
NBOGDFMD_00357 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
NBOGDFMD_00358 3.9e-70 rplI J binds to the 23S rRNA
NBOGDFMD_00359 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
NBOGDFMD_00360 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
NBOGDFMD_00361 1.5e-77 F NUDIX domain
NBOGDFMD_00362 3.3e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
NBOGDFMD_00363 0.0 S Bacterial membrane protein, YfhO
NBOGDFMD_00364 1.5e-91 isaA GH23 M Immunodominant staphylococcal antigen A
NBOGDFMD_00365 3.1e-93 lytE M LysM domain protein
NBOGDFMD_00366 2.2e-137 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NBOGDFMD_00367 5.2e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NBOGDFMD_00368 1.5e-152 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NBOGDFMD_00369 6.9e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NBOGDFMD_00370 3.7e-138 ymfM S sequence-specific DNA binding
NBOGDFMD_00371 1.4e-242 ymfH S Peptidase M16
NBOGDFMD_00372 1.4e-234 ymfF S Peptidase M16
NBOGDFMD_00373 1.2e-43 yaaA S S4 domain protein YaaA
NBOGDFMD_00374 1.7e-204 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NBOGDFMD_00375 1.5e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
NBOGDFMD_00376 8.2e-193 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
NBOGDFMD_00377 1.1e-153 yvjA S membrane
NBOGDFMD_00378 6.7e-306 ybiT S abc transporter atp-binding protein
NBOGDFMD_00379 0.0 XK27_10405 S Bacterial membrane protein YfhO
NBOGDFMD_00383 6.2e-120 yoaK S Psort location CytoplasmicMembrane, score
NBOGDFMD_00384 1.1e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NBOGDFMD_00385 5.3e-194 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
NBOGDFMD_00386 1e-134 parB K Belongs to the ParB family
NBOGDFMD_00387 1.3e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NBOGDFMD_00388 5.3e-201 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NBOGDFMD_00389 1.1e-29 yyzM S Protein conserved in bacteria
NBOGDFMD_00390 1.9e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NBOGDFMD_00391 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NBOGDFMD_00392 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NBOGDFMD_00393 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
NBOGDFMD_00394 2.7e-61 divIC D Septum formation initiator
NBOGDFMD_00396 1.3e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
NBOGDFMD_00397 5e-240 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NBOGDFMD_00398 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NBOGDFMD_00399 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NBOGDFMD_00400 1.7e-162 L Transposase
NBOGDFMD_00401 1.9e-92 L Transposase
NBOGDFMD_00402 2.7e-28 L transposition
NBOGDFMD_00403 5.5e-81 L Integrase core domain protein
NBOGDFMD_00404 1.1e-278 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
NBOGDFMD_00405 1.2e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
NBOGDFMD_00406 0.0 dnaE 2.7.7.7 L DNA polymerase
NBOGDFMD_00407 3.2e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
NBOGDFMD_00408 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NBOGDFMD_00409 6.8e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NBOGDFMD_00410 2.5e-43 ysdA L Membrane
NBOGDFMD_00411 6.6e-190 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
NBOGDFMD_00412 3.4e-291 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NBOGDFMD_00413 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NBOGDFMD_00414 2.5e-180 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
NBOGDFMD_00416 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
NBOGDFMD_00417 2.1e-84 ypmS S Protein conserved in bacteria
NBOGDFMD_00418 6e-144 ypmR E lipolytic protein G-D-S-L family
NBOGDFMD_00419 1e-148 DegV S DegV family
NBOGDFMD_00420 5.8e-305 recN L May be involved in recombinational repair of damaged DNA
NBOGDFMD_00421 1.8e-72 argR K Regulates arginine biosynthesis genes
NBOGDFMD_00422 5e-159 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
NBOGDFMD_00423 1.5e-158 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
NBOGDFMD_00424 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
NBOGDFMD_00425 1.2e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NBOGDFMD_00427 3.4e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NBOGDFMD_00428 2.9e-125 dnaD
NBOGDFMD_00429 9.3e-183 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NBOGDFMD_00430 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NBOGDFMD_00431 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
NBOGDFMD_00432 6.7e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
NBOGDFMD_00433 9.2e-175 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
NBOGDFMD_00434 4.2e-118 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
NBOGDFMD_00435 1.4e-223 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NBOGDFMD_00436 5.4e-197 L transposase, IS4 family
NBOGDFMD_00437 5.6e-240 rodA D Belongs to the SEDS family
NBOGDFMD_00438 1.8e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP
NBOGDFMD_00439 5.5e-61 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NBOGDFMD_00440 9.6e-138 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
NBOGDFMD_00441 1.7e-131 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
NBOGDFMD_00442 3.2e-112 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NBOGDFMD_00443 3.9e-107 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
NBOGDFMD_00444 1.1e-234 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NBOGDFMD_00445 2.7e-117 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
NBOGDFMD_00446 1.5e-183 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
NBOGDFMD_00447 1.5e-197 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NBOGDFMD_00449 6.6e-31 L Integrase core domain protein
NBOGDFMD_00450 5.9e-55 L transposition
NBOGDFMD_00451 8.2e-22 L Transposase
NBOGDFMD_00452 5.2e-36 L transposase activity
NBOGDFMD_00453 1.3e-22 XK27_08085
NBOGDFMD_00454 5.6e-92 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
NBOGDFMD_00455 2.3e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
NBOGDFMD_00456 2e-140 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
NBOGDFMD_00457 1.1e-121 ylfI S tigr01906
NBOGDFMD_00458 5.9e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
NBOGDFMD_00459 1.5e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
NBOGDFMD_00460 4.1e-217 hemN H Involved in the biosynthesis of porphyrin-containing compound
NBOGDFMD_00463 7.1e-68 L Transposase
NBOGDFMD_00464 3.7e-54 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
NBOGDFMD_00465 1.7e-111 hsdM 2.1.1.72 V type I restriction-modification system
NBOGDFMD_00466 3.7e-157 glcU U Glucose uptake
NBOGDFMD_00467 1.8e-08 4.2.1.53 S Myosin-crossreactive antigen
NBOGDFMD_00468 5.9e-79 hsdM 2.1.1.72 V HsdM N-terminal domain
NBOGDFMD_00469 2.2e-101 XK27_10720 D peptidase activity
NBOGDFMD_00470 3.1e-292 adcA P Belongs to the bacterial solute-binding protein 9 family
NBOGDFMD_00471 1.7e-08
NBOGDFMD_00473 1.2e-172 yeiH S Membrane
NBOGDFMD_00474 5.5e-119 mur1 NU muramidase
NBOGDFMD_00475 2.4e-83 L transposition
NBOGDFMD_00476 4.5e-166 cpsY K Transcriptional regulator
NBOGDFMD_00477 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NBOGDFMD_00478 2.5e-58 phnA P Alkylphosphonate utilization operon protein PhnA
NBOGDFMD_00479 2e-104 artQ P ABC transporter (Permease
NBOGDFMD_00480 1.8e-113 glnQ 3.6.3.21 E abc transporter atp-binding protein
NBOGDFMD_00481 2.5e-158 aatB ET ABC transporter substrate-binding protein
NBOGDFMD_00482 1e-137 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NBOGDFMD_00483 2.1e-07
NBOGDFMD_00484 4.1e-26
NBOGDFMD_00485 8.1e-60 adhP 1.1.1.1 C alcohol dehydrogenase
NBOGDFMD_00486 1.7e-17 adhP 1.1.1.1 C alcohol dehydrogenase
NBOGDFMD_00487 7.2e-30 adhP 1.1.1.1 C alcohol dehydrogenase
NBOGDFMD_00488 4.6e-78 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
NBOGDFMD_00489 3.9e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
NBOGDFMD_00490 2e-126 gntR1 K transcriptional
NBOGDFMD_00491 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
NBOGDFMD_00492 2.2e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NBOGDFMD_00493 4.1e-87 niaX
NBOGDFMD_00494 8.6e-90 niaR S small molecule binding protein (contains 3H domain)
NBOGDFMD_00495 1.8e-127 K DNA-binding helix-turn-helix protein
NBOGDFMD_00496 1.1e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NBOGDFMD_00497 6.9e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NBOGDFMD_00498 8.2e-168 GK ROK family
NBOGDFMD_00499 8.3e-159 dprA LU DNA protecting protein DprA
NBOGDFMD_00500 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NBOGDFMD_00501 1.4e-150 S TraX protein
NBOGDFMD_00502 2.2e-122 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBOGDFMD_00503 2.4e-251 T PhoQ Sensor
NBOGDFMD_00504 1.5e-258 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
NBOGDFMD_00505 1.1e-152 XK27_05470 E Methionine synthase
NBOGDFMD_00506 1.7e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
NBOGDFMD_00507 2.7e-48 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NBOGDFMD_00508 2.4e-37 IQ Acetoin reductase
NBOGDFMD_00509 5.9e-45 IQ Acetoin reductase
NBOGDFMD_00511 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NBOGDFMD_00512 1.8e-156 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
NBOGDFMD_00517 5.3e-11
NBOGDFMD_00522 1.3e-140 mreC M Involved in formation and maintenance of cell shape
NBOGDFMD_00523 8.2e-88 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
NBOGDFMD_00524 4e-94 usp 3.5.1.28 CBM50 S CHAP domain
NBOGDFMD_00525 1.2e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NBOGDFMD_00526 2.9e-218 araT 2.6.1.1 E Aminotransferase
NBOGDFMD_00527 7e-144 recO L Involved in DNA repair and RecF pathway recombination
NBOGDFMD_00528 9.6e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
NBOGDFMD_00529 9.3e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
NBOGDFMD_00530 9.9e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
NBOGDFMD_00531 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NBOGDFMD_00532 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NBOGDFMD_00533 4.8e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
NBOGDFMD_00534 1.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NBOGDFMD_00535 6.6e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
NBOGDFMD_00536 1e-90 L transposase activity
NBOGDFMD_00537 3.5e-50 L transposition
NBOGDFMD_00538 2e-32 L Integrase core domain protein
NBOGDFMD_00539 2.3e-161 S CHAP domain
NBOGDFMD_00540 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
NBOGDFMD_00541 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NBOGDFMD_00542 2.2e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NBOGDFMD_00543 9.2e-141 1.1.1.169 H Ketopantoate reductase
NBOGDFMD_00544 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NBOGDFMD_00545 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NBOGDFMD_00546 8.2e-70 argR K Regulates arginine biosynthesis genes
NBOGDFMD_00547 1e-57 ymcA 3.6.3.21 S Belongs to the UPF0342 family
NBOGDFMD_00548 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NBOGDFMD_00549 7e-34 S Protein of unknown function (DUF3021)
NBOGDFMD_00550 1.2e-61 KT phosphorelay signal transduction system
NBOGDFMD_00552 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NBOGDFMD_00554 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NBOGDFMD_00555 6.4e-107 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
NBOGDFMD_00556 1e-232 cinA 3.5.1.42 S Belongs to the CinA family
NBOGDFMD_00557 4.7e-205 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NBOGDFMD_00558 2.3e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
NBOGDFMD_00559 2.4e-92 pat 2.3.1.183 M acetyltransferase
NBOGDFMD_00560 1.1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NBOGDFMD_00561 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NBOGDFMD_00562 8.4e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NBOGDFMD_00563 0.0 smc D Required for chromosome condensation and partitioning
NBOGDFMD_00564 1.1e-197 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NBOGDFMD_00565 9.9e-94 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
NBOGDFMD_00566 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NBOGDFMD_00569 2e-55 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
NBOGDFMD_00570 5e-240 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
NBOGDFMD_00572 2e-86 S ECF-type riboflavin transporter, S component
NBOGDFMD_00573 4.5e-44 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
NBOGDFMD_00574 8.7e-85 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
NBOGDFMD_00575 3.3e-82 XK27_01265 S ECF-type riboflavin transporter, S component
NBOGDFMD_00576 1.9e-294 yfmM S abc transporter atp-binding protein
NBOGDFMD_00577 3.4e-258 noxE P NADH oxidase
NBOGDFMD_00578 1.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NBOGDFMD_00579 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NBOGDFMD_00580 8.7e-131 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
NBOGDFMD_00581 8.3e-51 yaeR E COG0346 LactoylglutaTHIone lyase and related lyases
NBOGDFMD_00582 6.9e-165 ypuA S secreted protein
NBOGDFMD_00583 3.3e-26 L Transposase (IS116 IS110 IS902 family)
NBOGDFMD_00584 4.2e-71 L Transposase (IS116 IS110 IS902 family)
NBOGDFMD_00586 1.7e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NBOGDFMD_00587 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NBOGDFMD_00588 2.2e-34 nrdH O Glutaredoxin
NBOGDFMD_00589 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NBOGDFMD_00590 6.7e-212 citZ 2.3.3.1 C Belongs to the citrate synthase family
NBOGDFMD_00591 7.4e-222 icd 1.1.1.42 C Isocitrate dehydrogenase
NBOGDFMD_00592 7.9e-39 ptsH G phosphocarrier protein Hpr
NBOGDFMD_00593 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NBOGDFMD_00594 5.9e-42 L Transposase
NBOGDFMD_00596 3.4e-155 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
NBOGDFMD_00597 0.0 KLT serine threonine protein kinase
NBOGDFMD_00598 2.1e-280 V ABC transporter
NBOGDFMD_00599 2.7e-12 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
NBOGDFMD_00600 1.4e-127 Z012_04635 K sequence-specific DNA binding
NBOGDFMD_00602 6.3e-16 C Radical SAM
NBOGDFMD_00603 3.4e-191 C Radical SAM
NBOGDFMD_00604 3.9e-287 V ABC transporter transmembrane region
NBOGDFMD_00605 1.3e-60 K sequence-specific DNA binding
NBOGDFMD_00606 3.1e-14 K Cro/C1-type HTH DNA-binding domain
NBOGDFMD_00607 1.3e-36 L Replication initiation factor
NBOGDFMD_00608 1.4e-107 L Replication initiation factor
NBOGDFMD_00609 1.9e-18 S Domain of unknown function (DUF3173)
NBOGDFMD_00610 3.5e-216 int L Belongs to the 'phage' integrase family
NBOGDFMD_00612 5.2e-237 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
NBOGDFMD_00613 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
NBOGDFMD_00614 2.8e-44 yrzL S Belongs to the UPF0297 family
NBOGDFMD_00615 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NBOGDFMD_00616 4.2e-44 yrzB S Belongs to the UPF0473 family
NBOGDFMD_00617 2.3e-301 ccs S the current gene model (or a revised gene model) may contain a frame shift
NBOGDFMD_00618 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
NBOGDFMD_00619 7.5e-14
NBOGDFMD_00620 2.6e-91 XK27_10930 K acetyltransferase
NBOGDFMD_00621 1.1e-115 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NBOGDFMD_00622 1.8e-147 yaaA S Belongs to the UPF0246 family
NBOGDFMD_00623 9.9e-169 XK27_01785 S cog cog1284
NBOGDFMD_00624 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
NBOGDFMD_00626 1.6e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
NBOGDFMD_00627 5.7e-52 metE 2.1.1.14 E Methionine synthase
NBOGDFMD_00628 7.6e-64 metE 2.1.1.14 E Methionine synthase
NBOGDFMD_00629 9.2e-36 metE 2.1.1.14 E Methionine synthase
NBOGDFMD_00630 2e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
NBOGDFMD_00631 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
NBOGDFMD_00633 3.1e-20 yegS 2.7.1.107 I lipid kinase activity
NBOGDFMD_00634 2.7e-95 S Hydrophobic domain protein
NBOGDFMD_00636 3.7e-27 S Membrane
NBOGDFMD_00637 3.1e-101
NBOGDFMD_00638 1.8e-23 S Small integral membrane protein
NBOGDFMD_00639 4.3e-71 M Protein conserved in bacteria
NBOGDFMD_00640 4.9e-12 K CsbD-like
NBOGDFMD_00641 7.2e-95 nudL L hydrolase
NBOGDFMD_00642 3.4e-13 nudL L hydrolase
NBOGDFMD_00643 1.9e-197 2.7.7.73, 2.7.7.80 H Involved in molybdopterin and thiamine biosynthesis, family 2
NBOGDFMD_00644 3.1e-172 yxaM EGP Major facilitator Superfamily
NBOGDFMD_00645 8.8e-83 adk 2.7.4.3 F topology modulation protein
NBOGDFMD_00646 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NBOGDFMD_00647 1e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NBOGDFMD_00648 1.7e-35 XK27_09805 S MORN repeat protein
NBOGDFMD_00649 0.0 XK27_09800 I Acyltransferase
NBOGDFMD_00650 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NBOGDFMD_00651 1.3e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
NBOGDFMD_00652 1.1e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NBOGDFMD_00653 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
NBOGDFMD_00654 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NBOGDFMD_00655 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NBOGDFMD_00656 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NBOGDFMD_00657 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NBOGDFMD_00658 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NBOGDFMD_00659 7.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NBOGDFMD_00660 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
NBOGDFMD_00661 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NBOGDFMD_00662 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NBOGDFMD_00663 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NBOGDFMD_00664 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NBOGDFMD_00665 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NBOGDFMD_00666 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NBOGDFMD_00667 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NBOGDFMD_00668 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NBOGDFMD_00669 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NBOGDFMD_00670 2.5e-23 rpmD J ribosomal protein l30
NBOGDFMD_00671 4.4e-58 rplO J binds to the 23S rRNA
NBOGDFMD_00672 1.4e-229 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NBOGDFMD_00673 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NBOGDFMD_00674 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NBOGDFMD_00675 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
NBOGDFMD_00676 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NBOGDFMD_00677 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NBOGDFMD_00678 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NBOGDFMD_00679 3.3e-62 rplQ J ribosomal protein l17
NBOGDFMD_00680 1.8e-111 L PFAM Integrase, catalytic core
NBOGDFMD_00681 3.3e-09 L PFAM Integrase, catalytic core
NBOGDFMD_00682 7.2e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
NBOGDFMD_00683 3.6e-64 6.3.2.2 H gamma-glutamylcysteine synthetase
NBOGDFMD_00684 6.7e-110 6.3.2.2 H ergothioneine biosynthetic process
NBOGDFMD_00686 9e-164 fba 4.1.2.13, 4.1.2.29 G aldolase
NBOGDFMD_00687 1e-140 L DNA integration
NBOGDFMD_00688 8e-42 K Cold-Shock Protein
NBOGDFMD_00689 5.4e-32 cspD K Cold shock protein domain
NBOGDFMD_00690 6.4e-168 pepD E Dipeptidase
NBOGDFMD_00691 8.7e-162 whiA K May be required for sporulation
NBOGDFMD_00692 3.6e-182 ybhK S Required for morphogenesis under gluconeogenic growth conditions
NBOGDFMD_00693 1.2e-163 rapZ S Displays ATPase and GTPase activities
NBOGDFMD_00694 2.8e-137 yejC S cyclic nucleotide-binding protein
NBOGDFMD_00695 4.2e-18 D nuclear chromosome segregation
NBOGDFMD_00696 2.5e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
NBOGDFMD_00697 3.9e-133 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
NBOGDFMD_00698 2.2e-81 queD 4.1.2.50, 4.2.3.12 H synthase
NBOGDFMD_00699 4.4e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
NBOGDFMD_00700 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
NBOGDFMD_00701 3e-13
NBOGDFMD_00703 1.7e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NBOGDFMD_00704 6.5e-218 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
NBOGDFMD_00705 3.1e-81 ypmB S Protein conserved in bacteria
NBOGDFMD_00706 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
NBOGDFMD_00707 8.9e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
NBOGDFMD_00708 4.8e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
NBOGDFMD_00709 4.7e-191 yufP S Belongs to the binding-protein-dependent transport system permease family
NBOGDFMD_00710 8.3e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
NBOGDFMD_00711 9.5e-192 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
NBOGDFMD_00712 1.3e-69 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
NBOGDFMD_00713 4e-63 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NBOGDFMD_00714 1.4e-22 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NBOGDFMD_00715 1.3e-97 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
NBOGDFMD_00716 1.2e-57 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
NBOGDFMD_00717 1.8e-107 rsmC 2.1.1.172 J Methyltransferase small domain protein
NBOGDFMD_00718 1.9e-172 coaA 2.7.1.33 F Pantothenic acid kinase
NBOGDFMD_00719 2.1e-30 rpsT J rRNA binding
NBOGDFMD_00720 1.5e-37 L transposase activity
NBOGDFMD_00721 3.2e-66 L COG2801 Transposase and inactivated derivatives
NBOGDFMD_00722 1.2e-73 L COG2801 Transposase and inactivated derivatives
NBOGDFMD_00723 8.9e-11
NBOGDFMD_00724 7.8e-59 S Protein of unknown function (DUF1722)
NBOGDFMD_00725 3.3e-64 yqeB S Pyrimidine dimer DNA glycosylase
NBOGDFMD_00727 1.2e-32
NBOGDFMD_00728 1.7e-26 S CAAX protease self-immunity
NBOGDFMD_00729 5.5e-42 S CAAX protease self-immunity
NBOGDFMD_00730 5.6e-27 estA E GDSL-like Lipase/Acylhydrolase
NBOGDFMD_00731 2.1e-95
NBOGDFMD_00732 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
NBOGDFMD_00733 1.1e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NBOGDFMD_00734 3.1e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NBOGDFMD_00735 1e-185 S CRISPR-associated protein Csn2 subfamily St
NBOGDFMD_00736 2.7e-146 ycgQ S TIGR03943 family
NBOGDFMD_00737 1.2e-155 XK27_03015 S permease
NBOGDFMD_00739 0.0 yhgF K Transcriptional accessory protein
NBOGDFMD_00740 9.9e-42 pspC KT PspC domain
NBOGDFMD_00741 1e-170 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
NBOGDFMD_00742 4e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NBOGDFMD_00744 5.5e-69 ytxH S General stress protein
NBOGDFMD_00746 2e-177 yegQ O Peptidase U32
NBOGDFMD_00747 3.4e-252 yegQ O Peptidase U32
NBOGDFMD_00748 8.1e-46 S CHY zinc finger
NBOGDFMD_00749 2.1e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NBOGDFMD_00750 4.4e-123 comFC S Competence protein
NBOGDFMD_00751 1.7e-254 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
NBOGDFMD_00752 6.3e-111 yvyE 3.4.13.9 S YigZ family
NBOGDFMD_00753 2.2e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
NBOGDFMD_00754 3.3e-43 acuB S IMP dehydrogenase activity
NBOGDFMD_00755 2.8e-70 acuB S IMP dehydrogenase activity
NBOGDFMD_00756 9.6e-124 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
NBOGDFMD_00757 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
NBOGDFMD_00758 1.4e-138 livM E Belongs to the binding-protein-dependent transport system permease family
NBOGDFMD_00759 1.9e-145 livH E Belongs to the binding-protein-dependent transport system permease family
NBOGDFMD_00760 1.1e-212 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
NBOGDFMD_00761 7.1e-46 ylbG S UPF0298 protein
NBOGDFMD_00762 3.4e-74 ylbF S Belongs to the UPF0342 family
NBOGDFMD_00763 2.9e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NBOGDFMD_00764 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NBOGDFMD_00765 1.4e-09 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
NBOGDFMD_00767 1e-223 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
NBOGDFMD_00768 4.7e-202 metB 2.5.1.48, 4.4.1.8 E cystathionine
NBOGDFMD_00769 6.6e-88 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
NBOGDFMD_00770 4.5e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
NBOGDFMD_00771 1.4e-275 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NBOGDFMD_00772 2.1e-213 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
NBOGDFMD_00773 3.4e-37 yvdD 3.2.2.10 L Belongs to the LOG family
NBOGDFMD_00774 2e-22 yvdD 3.2.2.10 S Belongs to the LOG family
NBOGDFMD_00775 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NBOGDFMD_00776 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NBOGDFMD_00777 1.4e-41 ylxQ J ribosomal protein
NBOGDFMD_00778 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
NBOGDFMD_00779 3.1e-212 nusA K Participates in both transcription termination and antitermination
NBOGDFMD_00780 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
NBOGDFMD_00781 2.5e-220 brpA K Transcriptional
NBOGDFMD_00782 2.4e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
NBOGDFMD_00783 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
NBOGDFMD_00784 2.1e-247 pbuO S permease
NBOGDFMD_00785 1e-153 yitU 3.1.3.104 S hydrolases of the HAD superfamily
NBOGDFMD_00786 1.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
NBOGDFMD_00787 2.8e-174 manL 2.7.1.191 G pts system
NBOGDFMD_00788 1.7e-116 manM G pts system
NBOGDFMD_00789 6.2e-168 manN G PTS system mannose fructose sorbose family IID component
NBOGDFMD_00790 4.2e-62 manO S protein conserved in bacteria
NBOGDFMD_00791 8.6e-232 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NBOGDFMD_00792 7.8e-28 L transposase activity
NBOGDFMD_00793 5.7e-23 L Transposase
NBOGDFMD_00794 3.4e-50 L transposition
NBOGDFMD_00795 3e-27 L Integrase core domain protein
NBOGDFMD_00796 6.7e-14 yrdC 3.5.1.19 Q isochorismatase
NBOGDFMD_00797 1.2e-34
NBOGDFMD_00799 2.6e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
NBOGDFMD_00800 4.4e-166 dnaI L Primosomal protein DnaI
NBOGDFMD_00801 6.5e-218 dnaB L Replication initiation and membrane attachment
NBOGDFMD_00802 4.7e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NBOGDFMD_00803 2.8e-282 T PhoQ Sensor
NBOGDFMD_00804 1.8e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBOGDFMD_00805 2.4e-90 yceD K metal-binding, possibly nucleic acid-binding protein
NBOGDFMD_00806 1.1e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
NBOGDFMD_00807 5.2e-243 P COG0168 Trk-type K transport systems, membrane components
NBOGDFMD_00808 1.4e-121 ktrA P COG0569 K transport systems, NAD-binding component
NBOGDFMD_00809 1.4e-11 ulaG S L-ascorbate 6-phosphate lactonase
NBOGDFMD_00810 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NBOGDFMD_00811 1.2e-149 cbiQ P cobalt transport
NBOGDFMD_00812 0.0 ykoD P abc transporter atp-binding protein
NBOGDFMD_00813 8e-94 S UPF0397 protein
NBOGDFMD_00814 5.5e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
NBOGDFMD_00815 4.6e-211 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
NBOGDFMD_00816 5.2e-98 metI P ABC transporter (Permease
NBOGDFMD_00817 2.6e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NBOGDFMD_00818 1e-63 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
NBOGDFMD_00819 1.4e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
NBOGDFMD_00820 7.1e-86 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
NBOGDFMD_00821 3.7e-165 metQ M Belongs to the NlpA lipoprotein family
NBOGDFMD_00822 4e-153 ET amino acid transport
NBOGDFMD_00823 3.8e-205 EGP Transmembrane secretion effector
NBOGDFMD_00824 0.0 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
NBOGDFMD_00825 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NBOGDFMD_00826 5.3e-153 ET amino acid transport
NBOGDFMD_00827 1.6e-131 cbiO P ABC transporter
NBOGDFMD_00828 1.7e-137 P cobalt transport protein
NBOGDFMD_00829 2.7e-177 cbiM P PDGLE domain
NBOGDFMD_00830 4.9e-159 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NBOGDFMD_00831 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
NBOGDFMD_00832 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NBOGDFMD_00833 6.6e-78 ureE O enzyme active site formation
NBOGDFMD_00834 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
NBOGDFMD_00835 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
NBOGDFMD_00836 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
NBOGDFMD_00837 1.2e-94 ureI S AmiS/UreI family transporter
NBOGDFMD_00838 1e-55 S Domain of unknown function (DUF4173)
NBOGDFMD_00839 2.6e-47 yhaI L Membrane
NBOGDFMD_00840 3.4e-68 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NBOGDFMD_00841 1.8e-27 comA V protein secretion by the type I secretion system
NBOGDFMD_00842 1.1e-34 V protein secretion by the type I secretion system
NBOGDFMD_00843 4.3e-57 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NBOGDFMD_00844 7.4e-36 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NBOGDFMD_00845 1.2e-32 V protein secretion by the type I secretion system
NBOGDFMD_00846 5.6e-161 K sequence-specific DNA binding
NBOGDFMD_00847 4.8e-114 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
NBOGDFMD_00848 1.3e-88 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NBOGDFMD_00849 2.7e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NBOGDFMD_00850 1.4e-245 trkA P Potassium transporter peripheral membrane component
NBOGDFMD_00851 4.8e-255 trkH P Cation transport protein
NBOGDFMD_00852 1.8e-40 yidD S Could be involved in insertion of integral membrane proteins into the membrane
NBOGDFMD_00853 6.1e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NBOGDFMD_00854 3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NBOGDFMD_00855 3.8e-120 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NBOGDFMD_00856 4.5e-135 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
NBOGDFMD_00857 7.8e-85 ykuL S CBS domain
NBOGDFMD_00858 3.5e-99 XK27_09740 S Phosphoesterase
NBOGDFMD_00859 7.1e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NBOGDFMD_00860 3.8e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
NBOGDFMD_00861 7.6e-36 yneF S UPF0154 protein
NBOGDFMD_00862 3.7e-91 K transcriptional regulator
NBOGDFMD_00863 9.6e-244 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NBOGDFMD_00866 3.3e-97 ybhL S Belongs to the BI1 family
NBOGDFMD_00867 4.6e-88 XK27_09705 6.1.1.14 S HD superfamily hydrolase
NBOGDFMD_00868 6.4e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NBOGDFMD_00869 7e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
NBOGDFMD_00870 2.9e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NBOGDFMD_00871 2e-58 L Integrase core domain protein
NBOGDFMD_00872 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NBOGDFMD_00873 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NBOGDFMD_00874 7.3e-80 XK27_09675 K -acetyltransferase
NBOGDFMD_00875 2.6e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
NBOGDFMD_00876 2.5e-23
NBOGDFMD_00877 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
NBOGDFMD_00878 2.5e-296 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
NBOGDFMD_00879 1.5e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
NBOGDFMD_00880 2.5e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
NBOGDFMD_00881 3.1e-95 ypsA S Belongs to the UPF0398 family
NBOGDFMD_00882 2.5e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
NBOGDFMD_00883 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
NBOGDFMD_00884 1.7e-259 pepC 3.4.22.40 E aminopeptidase
NBOGDFMD_00885 3.2e-77 yhaI L Membrane
NBOGDFMD_00886 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
NBOGDFMD_00887 8.2e-279 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NBOGDFMD_00888 1.1e-65 S COG1073 Hydrolases of the alpha beta superfamily
NBOGDFMD_00889 6.5e-67 S COG1073 Hydrolases of the alpha beta superfamily
NBOGDFMD_00890 2e-24 S COG1073 Hydrolases of the alpha beta superfamily
NBOGDFMD_00891 3.8e-40 K transcriptional
NBOGDFMD_00892 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
NBOGDFMD_00893 1.6e-137 glcR K transcriptional regulator (DeoR family)
NBOGDFMD_00894 6.2e-35 cof Q phosphatase activity
NBOGDFMD_00895 6e-55 cof Q phosphatase activity
NBOGDFMD_00896 4.6e-85 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
NBOGDFMD_00897 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
NBOGDFMD_00898 5.7e-25 secE U Belongs to the SecE SEC61-gamma family
NBOGDFMD_00899 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
NBOGDFMD_00900 1.2e-165 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
NBOGDFMD_00901 6.8e-56 S TM2 domain
NBOGDFMD_00902 4.7e-43
NBOGDFMD_00905 1.5e-30 L transposition
NBOGDFMD_00906 6.4e-18 L transposase activity
NBOGDFMD_00907 4.4e-37 L Transposase
NBOGDFMD_00908 4.1e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NBOGDFMD_00909 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NBOGDFMD_00910 5.2e-142 cmpC S abc transporter atp-binding protein
NBOGDFMD_00911 0.0 WQ51_06230 S ABC transporter substrate binding protein
NBOGDFMD_00912 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NBOGDFMD_00913 7.2e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
NBOGDFMD_00914 2.2e-145 cdsA 2.7.7.41 S Belongs to the CDS family
NBOGDFMD_00915 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NBOGDFMD_00916 9.8e-50 yajC U protein transport
NBOGDFMD_00917 1.9e-127 yeeN K transcriptional regulatory protein
NBOGDFMD_00918 2.8e-257 pgi 5.3.1.9 G Belongs to the GPI family
NBOGDFMD_00919 6.8e-158 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
NBOGDFMD_00920 3.6e-106 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
NBOGDFMD_00921 2.1e-150 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G pts system
NBOGDFMD_00922 5.6e-65 ptsG 2.7.1.199, 2.7.1.208 G pts system
NBOGDFMD_00923 1.4e-162 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
NBOGDFMD_00924 1.6e-127 adcB P ABC transporter (Permease
NBOGDFMD_00925 2.2e-136 adcC P ABC transporter, ATP-binding protein
NBOGDFMD_00926 3.1e-72 adcR K transcriptional
NBOGDFMD_00927 1.9e-223 EGP Major facilitator Superfamily
NBOGDFMD_00928 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NBOGDFMD_00929 1.8e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NBOGDFMD_00930 6.4e-23
NBOGDFMD_00931 3.4e-62 oppF P Belongs to the ABC transporter superfamily
NBOGDFMD_00932 7.5e-62 oppF P Belongs to the ABC transporter superfamily
NBOGDFMD_00933 7e-43 oppD P Belongs to the ABC transporter superfamily
NBOGDFMD_00934 1.2e-62 oppD P Belongs to the ABC transporter superfamily
NBOGDFMD_00935 2.5e-32 oppD P Belongs to the ABC transporter superfamily
NBOGDFMD_00936 3e-27 oppD P Belongs to the ABC transporter superfamily
NBOGDFMD_00937 1.4e-38 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
NBOGDFMD_00938 1.7e-33 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
NBOGDFMD_00939 6.6e-11 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
NBOGDFMD_00940 4.2e-27 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
NBOGDFMD_00941 2e-138 oppA E ABC transporter substrate-binding protein
NBOGDFMD_00942 7e-10 oppA E ABC transporter substrate-binding protein
NBOGDFMD_00943 3.5e-274 sufB O assembly protein SufB
NBOGDFMD_00944 1.1e-74 nifU C SUF system FeS assembly protein, NifU family
NBOGDFMD_00945 2.7e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NBOGDFMD_00946 6.3e-235 sufD O assembly protein SufD
NBOGDFMD_00947 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
NBOGDFMD_00948 3.8e-186 tagO 2.7.8.33, 2.7.8.35 M transferase
NBOGDFMD_00949 2.3e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
NBOGDFMD_00950 9.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
NBOGDFMD_00951 1.8e-276 glnP P ABC transporter
NBOGDFMD_00952 1e-123 glnQ E abc transporter atp-binding protein
NBOGDFMD_00955 5e-94 V VanZ like family
NBOGDFMD_00956 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NBOGDFMD_00957 6.5e-202 yhjX P Major Facilitator
NBOGDFMD_00958 1.1e-113 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
NBOGDFMD_00959 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NBOGDFMD_00960 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NBOGDFMD_00961 1.9e-45 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
NBOGDFMD_00962 5.6e-59 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
NBOGDFMD_00963 2e-27 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
NBOGDFMD_00964 1.4e-09 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
NBOGDFMD_00965 2.3e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NBOGDFMD_00966 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NBOGDFMD_00967 2.4e-83 nrdI F Belongs to the NrdI family
NBOGDFMD_00968 0.0 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
NBOGDFMD_00969 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NBOGDFMD_00970 3.7e-179 prmA J Ribosomal protein L11 methyltransferase
NBOGDFMD_00971 3.7e-81 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
NBOGDFMD_00972 1.3e-84 XK27_03960 S Protein of unknown function (DUF3013)
NBOGDFMD_00973 7.6e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NBOGDFMD_00974 4.8e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
NBOGDFMD_00975 6.4e-219 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
NBOGDFMD_00976 3.5e-149 ykuT M mechanosensitive ion channel
NBOGDFMD_00977 1.6e-77 sigH K DNA-templated transcription, initiation
NBOGDFMD_00978 1.1e-72
NBOGDFMD_00979 4.7e-232 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
NBOGDFMD_00980 2.8e-52 amd 3.5.1.47 E Peptidase dimerisation domain
NBOGDFMD_00981 9.9e-19 S Domain of unknown function (DUF4649)
NBOGDFMD_00983 3.6e-88 T PhoQ Sensor
NBOGDFMD_00984 2.2e-43 T PhoQ Sensor
NBOGDFMD_00985 2.8e-40 T PhoQ Sensor
NBOGDFMD_00986 6.4e-66 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBOGDFMD_00987 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
NBOGDFMD_00988 1.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
NBOGDFMD_00989 4.8e-94 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NBOGDFMD_00990 1.7e-94 panT S ECF transporter, substrate-specific component
NBOGDFMD_00991 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
NBOGDFMD_00992 7.3e-166 metF 1.5.1.20 E reductase
NBOGDFMD_00993 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NBOGDFMD_00995 6.9e-220 sip L Belongs to the 'phage' integrase family
NBOGDFMD_00996 1e-21 xre K transcriptional
NBOGDFMD_00997 1.8e-19 K Cro/C1-type HTH DNA-binding domain
NBOGDFMD_01001 3.1e-22
NBOGDFMD_01002 1.2e-149 KL Phage plasmid primase P4 family
NBOGDFMD_01003 1.4e-289 S DNA primase
NBOGDFMD_01005 2.9e-12
NBOGDFMD_01007 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
NBOGDFMD_01008 0.0 3.6.3.8 P cation transport ATPase
NBOGDFMD_01009 7.7e-19 L transposase activity
NBOGDFMD_01010 1.5e-35 K sequence-specific DNA binding
NBOGDFMD_01012 0.0 S Lantibiotic dehydratase, C terminus
NBOGDFMD_01013 1.6e-230 spaC2 V Lanthionine synthetase C family protein
NBOGDFMD_01014 3.3e-183 EGP Major facilitator Superfamily
NBOGDFMD_01015 1.6e-91 3.6.4.12 K Divergent AAA domain protein
NBOGDFMD_01016 4.8e-51 int L Belongs to the 'phage' integrase family
NBOGDFMD_01017 6.6e-105 int L Belongs to the 'phage' integrase family
NBOGDFMD_01018 2.8e-39 S Helix-turn-helix domain
NBOGDFMD_01019 4.9e-173
NBOGDFMD_01021 3.4e-75 isp2 S pathogenesis
NBOGDFMD_01022 2.2e-90 tnp L Transposase
NBOGDFMD_01023 3.3e-225 capA M Bacterial capsule synthesis protein
NBOGDFMD_01024 3.6e-39 gcvR T UPF0237 protein
NBOGDFMD_01025 1.9e-242 XK27_08635 S UPF0210 protein
NBOGDFMD_01026 8.3e-38 ais G alpha-ribazole phosphatase activity
NBOGDFMD_01027 7.9e-143 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
NBOGDFMD_01028 7.2e-101 acmA 3.2.1.17 NU amidase activity
NBOGDFMD_01029 5.4e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NBOGDFMD_01030 1.9e-69 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NBOGDFMD_01031 8.4e-281 dnaK O Heat shock 70 kDa protein
NBOGDFMD_01032 5.6e-182 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NBOGDFMD_01033 3.2e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NBOGDFMD_01034 1.4e-136 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
NBOGDFMD_01035 3.3e-72 hmpT S cog cog4720
NBOGDFMD_01037 7.9e-76 yocD 3.4.17.13 V carboxypeptidase activity
NBOGDFMD_01038 1.6e-67 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
NBOGDFMD_01041 1.3e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
NBOGDFMD_01042 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NBOGDFMD_01043 1.1e-83 S Putative small multi-drug export protein
NBOGDFMD_01044 6.2e-76 ctsR K Belongs to the CtsR family
NBOGDFMD_01045 0.0 clpC O Belongs to the ClpA ClpB family
NBOGDFMD_01046 3.2e-151 dacA 3.4.16.4 M Belongs to the peptidase S11 family
NBOGDFMD_01047 1.8e-32 dacA 3.4.16.4 M Belongs to the peptidase S11 family
NBOGDFMD_01048 1.2e-230 dacA 3.4.16.4 M Belongs to the peptidase S11 family
NBOGDFMD_01049 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
NBOGDFMD_01050 2e-143 S SseB protein N-terminal domain
NBOGDFMD_01051 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
NBOGDFMD_01052 3.9e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
NBOGDFMD_01053 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
NBOGDFMD_01056 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NBOGDFMD_01057 3.5e-91 yacP S RNA-binding protein containing a PIN domain
NBOGDFMD_01058 3.4e-155 degV S DegV family
NBOGDFMD_01059 1.8e-31 K helix-turn-helix
NBOGDFMD_01060 1.6e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NBOGDFMD_01061 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NBOGDFMD_01062 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
NBOGDFMD_01063 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NBOGDFMD_01064 8.3e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
NBOGDFMD_01065 2.4e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NBOGDFMD_01066 9e-206 yurR 1.4.5.1 E oxidoreductase
NBOGDFMD_01067 6.4e-29 zupT P transporter
NBOGDFMD_01068 1.1e-13 zupT P Mediates zinc uptake. May also transport other divalent cations
NBOGDFMD_01069 9.6e-149 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NBOGDFMD_01070 2.7e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
NBOGDFMD_01071 1.7e-70 gtrA S GtrA-like protein
NBOGDFMD_01072 1.5e-250 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NBOGDFMD_01073 6e-169 ybbR S Protein conserved in bacteria
NBOGDFMD_01074 5.6e-124 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NBOGDFMD_01075 7.5e-255 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
NBOGDFMD_01076 8.7e-150 cobQ S glutamine amidotransferase
NBOGDFMD_01077 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NBOGDFMD_01078 2.2e-131 pip 1.11.1.10 S Alpha beta hydrolase
NBOGDFMD_01079 0.0 uup S abc transporter atp-binding protein
NBOGDFMD_01080 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
NBOGDFMD_01081 2.7e-178 yfmL 3.6.4.13 L DEAD DEAH box helicase
NBOGDFMD_01082 2.1e-28 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
NBOGDFMD_01083 8.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
NBOGDFMD_01084 5.8e-42 L transposition
NBOGDFMD_01085 9.1e-83 L Integrase core domain protein
NBOGDFMD_01086 2.9e-102 L Transposase
NBOGDFMD_01087 1.7e-111 L Transposase
NBOGDFMD_01088 1.4e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NBOGDFMD_01089 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NBOGDFMD_01090 6.7e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NBOGDFMD_01091 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NBOGDFMD_01092 1.1e-142 purR 2.4.2.7 F operon repressor
NBOGDFMD_01093 3.6e-179 cbf S 3'-5' exoribonuclease yhaM
NBOGDFMD_01094 6.9e-173 rmuC S RmuC domain protein
NBOGDFMD_01095 3.1e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
NBOGDFMD_01096 3e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
NBOGDFMD_01097 6.4e-162 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
NBOGDFMD_01099 8.9e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NBOGDFMD_01100 3.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NBOGDFMD_01101 4.1e-144 tatD L Hydrolase, tatd
NBOGDFMD_01102 1.9e-74 yccU S CoA-binding protein
NBOGDFMD_01103 4.8e-51 trxA O Belongs to the thioredoxin family
NBOGDFMD_01104 1.9e-141 S Macro domain protein
NBOGDFMD_01105 2e-09 L thioesterase
NBOGDFMD_01106 1.3e-54 bta 1.8.1.8 CO cell redox homeostasis
NBOGDFMD_01112 1.8e-167 fhuR K transcriptional regulator (lysR family)
NBOGDFMD_01113 8.8e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NBOGDFMD_01114 5e-162 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
NBOGDFMD_01115 3.7e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NBOGDFMD_01116 4.9e-227 pyrP F uracil Permease
NBOGDFMD_01117 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
NBOGDFMD_01118 1.1e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
NBOGDFMD_01119 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
NBOGDFMD_01120 9.8e-163 L Integrase core domain protein
NBOGDFMD_01121 1.1e-82 L Helix-turn-helix domain
NBOGDFMD_01122 1.9e-21 L Helix-turn-helix domain
NBOGDFMD_01123 0.0 prtS 3.4.21.96 O Belongs to the peptidase S8 family
NBOGDFMD_01124 3.1e-268 clcA P Chloride transporter, ClC family
NBOGDFMD_01125 8.9e-206 potD P spermidine putrescine ABC transporter
NBOGDFMD_01126 1.7e-28 potC P Binding-protein-dependent transport system inner membrane component
NBOGDFMD_01127 1.8e-125 L Transposase
NBOGDFMD_01128 6.2e-85 L Transposase
NBOGDFMD_01133 2.6e-10
NBOGDFMD_01135 1.9e-07
NBOGDFMD_01140 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NBOGDFMD_01141 1.2e-235 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
NBOGDFMD_01142 5.5e-36 XK27_02060 S Transglycosylase associated protein
NBOGDFMD_01143 2.6e-55 badR K DNA-binding transcription factor activity
NBOGDFMD_01144 2.1e-82 S reductase
NBOGDFMD_01145 1.1e-33 L Integrase core domain protein
NBOGDFMD_01146 4.6e-132 2.1.1.223 S Putative SAM-dependent methyltransferase
NBOGDFMD_01147 7.6e-21 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBOGDFMD_01148 6.2e-38 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NBOGDFMD_01149 1.5e-18 V permease protein
NBOGDFMD_01150 3.6e-32 V efflux transmembrane transporter activity
NBOGDFMD_01151 7e-27 ytrF V efflux transmembrane transporter activity
NBOGDFMD_01152 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NBOGDFMD_01153 3.9e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NBOGDFMD_01154 9.6e-89 L Transposase
NBOGDFMD_01155 1.5e-92
NBOGDFMD_01156 1.6e-18 L Integrase core domain
NBOGDFMD_01157 0.0 L helicase
NBOGDFMD_01158 1.3e-66 nudG 3.6.1.55, 3.6.1.65 L Belongs to the Nudix hydrolase family
NBOGDFMD_01159 9e-10
NBOGDFMD_01160 1.1e-234 mntH P H( )-stimulated, divalent metal cation uptake system
NBOGDFMD_01161 8e-258 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
NBOGDFMD_01162 1.5e-135 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
NBOGDFMD_01163 1.1e-105 cps4C M biosynthesis protein
NBOGDFMD_01164 5.9e-110 cpsD D COG0489 ATPases involved in chromosome partitioning
NBOGDFMD_01166 1.7e-254 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
NBOGDFMD_01167 2.7e-23 rgpAc GT4 M group 1 family protein
NBOGDFMD_01168 2.7e-73 L Transposase DDE domain
NBOGDFMD_01169 5.6e-62 L Transposase DDE domain
NBOGDFMD_01170 1.2e-71 cps1D M Domain of unknown function (DUF4422)
NBOGDFMD_01171 7.7e-100
NBOGDFMD_01172 4.8e-102 M group 2 family protein
NBOGDFMD_01173 1.8e-32 ywqD 2.7.10.1 D Capsular exopolysaccharide family
NBOGDFMD_01174 8.7e-88 2.7.8.12 GT2 M Glycosyltransferase like family 2
NBOGDFMD_01175 1.8e-238 cps1C S Polysaccharide biosynthesis protein
NBOGDFMD_01176 1.4e-172 epsU S Polysaccharide biosynthesis protein
NBOGDFMD_01177 6e-20 epsU S Polysaccharide biosynthesis protein
NBOGDFMD_01178 8.2e-215 glf 5.4.99.9 M UDP-galactopyranose mutase
NBOGDFMD_01179 2.7e-169 L Transposase
NBOGDFMD_01180 5.8e-95 V VanZ like family
NBOGDFMD_01181 9.2e-15 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
NBOGDFMD_01182 8.4e-69 supH 3.1.3.102, 3.1.3.104 Q phosphatase activity
NBOGDFMD_01183 9.5e-89 G Belongs to the phosphoglycerate mutase family
NBOGDFMD_01184 1.3e-199 S hmm pf01594
NBOGDFMD_01185 2e-18 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
NBOGDFMD_01186 2.1e-138 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
NBOGDFMD_01187 4.9e-39 S granule-associated protein
NBOGDFMD_01188 1.8e-292 S unusual protein kinase
NBOGDFMD_01189 3.4e-29 estA E Lysophospholipase L1 and related esterases
NBOGDFMD_01190 1.8e-69 estA E GDSL-like protein
NBOGDFMD_01191 1.2e-157 rssA S Phospholipase, patatin family
NBOGDFMD_01192 4.3e-83 3.4.16.4 M Belongs to the peptidase S11 family
NBOGDFMD_01193 2.3e-26 3.4.16.4 M Belongs to the peptidase S11 family
NBOGDFMD_01194 3.9e-24 3.4.16.4 M Belongs to the peptidase S11 family
NBOGDFMD_01195 5.9e-22 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
NBOGDFMD_01196 1.6e-216 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NBOGDFMD_01197 2.9e-127 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NBOGDFMD_01198 2.4e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NBOGDFMD_01199 0.0 S the current gene model (or a revised gene model) may contain a frame shift
NBOGDFMD_01200 0.0 cas3 L CRISPR-associated helicase cas3
NBOGDFMD_01201 0.0 casA L the current gene model (or a revised gene model) may contain a frame shift
NBOGDFMD_01202 6e-103 casB S CRISPR system CASCADE complex protein CasB
NBOGDFMD_01203 5.8e-181 casC L CT1975-like protein
NBOGDFMD_01204 3.6e-134 casD S CRISPR system CASCADE complex protein CasD
NBOGDFMD_01205 3.2e-110 casE S CRISPR system CASCADE complex protein CasE
NBOGDFMD_01206 5.8e-169 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NBOGDFMD_01207 1.3e-160 cas2 2.7.7.7 L CRISPR-associated endoribonuclease Cas2
NBOGDFMD_01208 1.6e-52 2.7.13.3 T protein histidine kinase activity
NBOGDFMD_01209 3.6e-37 2.7.13.3 T protein histidine kinase activity
NBOGDFMD_01210 2.2e-83 2.7.13.3 T protein histidine kinase activity
NBOGDFMD_01211 3.1e-45 hpk9 2.7.13.3 T protein histidine kinase activity
NBOGDFMD_01212 6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
NBOGDFMD_01213 3.7e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
NBOGDFMD_01214 5.4e-200 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
NBOGDFMD_01215 0.0 lpdA 1.8.1.4 C Dehydrogenase
NBOGDFMD_01216 6.4e-11 3.5.1.28 NU amidase activity
NBOGDFMD_01217 7.9e-67 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
NBOGDFMD_01218 2.2e-112 3.5.1.28 M GBS Bsp-like repeat
NBOGDFMD_01219 1.5e-133 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
NBOGDFMD_01220 6.1e-66 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
NBOGDFMD_01221 1.7e-60 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
NBOGDFMD_01222 3.7e-85 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
NBOGDFMD_01223 1.5e-33 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
NBOGDFMD_01224 1e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NBOGDFMD_01225 5.6e-167 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NBOGDFMD_01226 6.8e-136 yclP 3.6.3.34 P abc transporter atp-binding protein
NBOGDFMD_01227 2e-178 fatB P ABC-type enterochelin transport system, periplasmic component
NBOGDFMD_01228 7.1e-153 ycdO P periplasmic lipoprotein involved in iron transport
NBOGDFMD_01229 5.6e-233 ycdB P peroxidase
NBOGDFMD_01230 8.8e-301 ywbL P COG0672 High-affinity Fe2 Pb2 permease
NBOGDFMD_01231 5.8e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NBOGDFMD_01232 4.6e-25 tatA U protein secretion
NBOGDFMD_01233 2.3e-23 L Transposase
NBOGDFMD_01234 2.3e-300 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
NBOGDFMD_01235 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
NBOGDFMD_01236 3.7e-09
NBOGDFMD_01237 1.1e-17
NBOGDFMD_01238 7.2e-186 lplA 6.3.1.20 H Lipoate-protein ligase
NBOGDFMD_01239 7e-195 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
NBOGDFMD_01240 0.0 pepN 3.4.11.2 E aminopeptidase
NBOGDFMD_01241 1.9e-113 phoU P Plays a role in the regulation of phosphate uptake
NBOGDFMD_01242 2.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NBOGDFMD_01243 1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NBOGDFMD_01244 1.2e-155 pstA P phosphate transport system permease
NBOGDFMD_01245 2.5e-156 pstC P probably responsible for the translocation of the substrate across the membrane
NBOGDFMD_01246 3.3e-158 pstS P phosphate
NBOGDFMD_01247 7.9e-257 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
NBOGDFMD_01248 5e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
NBOGDFMD_01249 1.9e-43 yktA S Belongs to the UPF0223 family
NBOGDFMD_01250 1.4e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
NBOGDFMD_01251 5.3e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
NBOGDFMD_01252 4.9e-151 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NBOGDFMD_01253 2.6e-49 XK27_04775 S hemerythrin HHE cation binding domain
NBOGDFMD_01254 1.7e-96 XK27_04775 S hemerythrin HHE cation binding domain
NBOGDFMD_01255 1.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
NBOGDFMD_01256 3.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NBOGDFMD_01257 9.3e-62 S haloacid dehalogenase-like hydrolase
NBOGDFMD_01258 1.8e-59 Q phosphatase activity
NBOGDFMD_01259 4.6e-241 metY 2.5.1.49 E o-acetylhomoserine
NBOGDFMD_01260 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
NBOGDFMD_01261 1.8e-240 agcS E (Alanine) symporter
NBOGDFMD_01262 1.6e-247 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NBOGDFMD_01263 1.4e-104 yfiF3 K sequence-specific DNA binding
NBOGDFMD_01264 9.8e-35 3.1.3.6, 3.1.4.16 F nucleotide catabolic process
NBOGDFMD_01265 2e-272 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
NBOGDFMD_01267 2.3e-20 yecS P amino acid transport
NBOGDFMD_01268 2.3e-62 yecS P ABC transporter (Permease
NBOGDFMD_01269 1.6e-266 dtpT E transporter
NBOGDFMD_01271 7.5e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NBOGDFMD_01272 8e-123 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
NBOGDFMD_01273 9.5e-32 csm6 S Psort location Cytoplasmic, score
NBOGDFMD_01275 2e-205 csm5 L CRISPR-associated RAMP protein, Csm5 family
NBOGDFMD_01276 2.3e-167 csm4 L CRISPR-associated RAMP protein, Csm4 family
NBOGDFMD_01277 1.6e-117 csm3 L RAMP superfamily
NBOGDFMD_01278 2.5e-62 csm2 L Csm2 Type III-A
NBOGDFMD_01279 0.0 csm1 S CRISPR-associated protein Csm1 family
NBOGDFMD_01280 6.8e-133 cas6 S CRISPR-associated endoribonuclease Cas6
NBOGDFMD_01281 9.8e-55 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NBOGDFMD_01282 2.8e-185 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NBOGDFMD_01283 3.2e-175 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NBOGDFMD_01284 1.3e-148 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
NBOGDFMD_01285 1.7e-96 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
NBOGDFMD_01286 1.8e-88 S TraX protein
NBOGDFMD_01287 9.2e-311 FbpA K RNA-binding protein homologous to eukaryotic snRNP
NBOGDFMD_01289 6.3e-12 dinF V Mate efflux family protein
NBOGDFMD_01290 3.6e-18 yclQ P ABC-type enterochelin transport system, periplasmic component
NBOGDFMD_01291 1.8e-24 yclQ P ABC-type enterochelin transport system, periplasmic component
NBOGDFMD_01292 4.1e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
NBOGDFMD_01293 1.2e-143 2.4.2.3 F Phosphorylase superfamily
NBOGDFMD_01296 4.5e-79 S Alpha/beta hydrolase of unknown function (DUF915)
NBOGDFMD_01297 7.9e-17 S Alpha/beta hydrolase of unknown function (DUF915)
NBOGDFMD_01298 6e-08 S Hydrolases of the alpha beta superfamily
NBOGDFMD_01299 6.2e-196 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
NBOGDFMD_01300 2.7e-210 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
NBOGDFMD_01301 1.8e-159 czcD P cation diffusion facilitator family transporter
NBOGDFMD_01302 9e-98 K Transcriptional regulator, TetR family
NBOGDFMD_01303 1.6e-10
NBOGDFMD_01304 2.8e-115 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
NBOGDFMD_01305 6.4e-104 V ABC transporter (Permease
NBOGDFMD_01306 3e-159 L Transposase
NBOGDFMD_01307 7.3e-13
NBOGDFMD_01308 8.8e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
NBOGDFMD_01309 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
NBOGDFMD_01310 6.6e-61 EGP Major facilitator Superfamily
NBOGDFMD_01311 4.4e-135 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
NBOGDFMD_01312 1.1e-212 pqqE C radical SAM domain protein
NBOGDFMD_01314 1.5e-59 cysE 2.3.1.30 E serine acetyltransferase
NBOGDFMD_01315 2.7e-219 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
NBOGDFMD_01316 2.3e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
NBOGDFMD_01317 2.9e-190 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
NBOGDFMD_01318 1.9e-49 M YSIRK type signal peptide
NBOGDFMD_01319 3.4e-91 S MucBP domain
NBOGDFMD_01323 1e-13 rpmH J Ribosomal protein L34
NBOGDFMD_01324 1e-33 L Transposase
NBOGDFMD_01325 1.7e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NBOGDFMD_01326 0.0 copB 3.6.3.4 P P-type ATPase
NBOGDFMD_01327 1.9e-87 bioY S biotin synthase
NBOGDFMD_01329 1.1e-33 XK27_12190 S protein conserved in bacteria
NBOGDFMD_01330 2.3e-226 L Transposase
NBOGDFMD_01331 1.5e-48 hrtB V ABC transporter (Permease
NBOGDFMD_01332 1.3e-117 devA 3.6.3.25 V abc transporter atp-binding protein
NBOGDFMD_01333 3.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NBOGDFMD_01334 3.5e-143 pts33BCA G pts system
NBOGDFMD_01335 5.8e-71 pts33BCA G pts system
NBOGDFMD_01336 4.8e-24 2.7.1.208, 2.7.1.211 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NBOGDFMD_01337 2.4e-09 uvrX 2.7.7.7 L impB/mucB/samB family
NBOGDFMD_01338 1.8e-254 cycA E permease
NBOGDFMD_01339 4.5e-39 ynzC S UPF0291 protein
NBOGDFMD_01340 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
NBOGDFMD_01341 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
NBOGDFMD_01342 6.1e-63 S membrane
NBOGDFMD_01343 3.9e-60
NBOGDFMD_01344 2.2e-25
NBOGDFMD_01345 4.9e-51
NBOGDFMD_01346 8e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
NBOGDFMD_01347 1.2e-92 nptA P COG1283 Na phosphate symporter
NBOGDFMD_01348 5.8e-149 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
NBOGDFMD_01349 4.9e-106 mur1 NU mannosyl-glycoprotein
NBOGDFMD_01350 1.1e-53 glnB K Belongs to the P(II) protein family
NBOGDFMD_01351 7.5e-233 amt P Ammonium Transporter
NBOGDFMD_01352 4.6e-160 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NBOGDFMD_01353 9.5e-55 yabA L Involved in initiation control of chromosome replication
NBOGDFMD_01354 1.2e-135 yaaT S stage 0 sporulation protein
NBOGDFMD_01355 4.2e-161 holB 2.7.7.7 L dna polymerase iii
NBOGDFMD_01356 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NBOGDFMD_01357 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NBOGDFMD_01358 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NBOGDFMD_01359 2.8e-230 ftsW D Belongs to the SEDS family
NBOGDFMD_01360 5.2e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
NBOGDFMD_01361 2.7e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NBOGDFMD_01362 2.5e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NBOGDFMD_01363 3.8e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NBOGDFMD_01364 9.3e-87 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NBOGDFMD_01365 3.3e-78 atpF C ATP synthase F(0) sector subunit b
NBOGDFMD_01366 4.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
NBOGDFMD_01367 3.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NBOGDFMD_01368 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NBOGDFMD_01369 1.9e-46 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NBOGDFMD_01370 5.6e-109 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NBOGDFMD_01371 1.5e-13 coiA 3.6.4.12 S Competence protein
NBOGDFMD_01372 2.2e-15 T peptidase
NBOGDFMD_01373 5.5e-153 rarD S Transporter
NBOGDFMD_01374 1.1e-153 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
NBOGDFMD_01375 6.8e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
NBOGDFMD_01376 4.1e-132 yxkH G deacetylase
NBOGDFMD_01377 1.6e-210 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
NBOGDFMD_01378 1.9e-130 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
NBOGDFMD_01379 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NBOGDFMD_01380 1.5e-191 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NBOGDFMD_01381 5.3e-228 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
NBOGDFMD_01382 1.2e-146 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
NBOGDFMD_01383 7.1e-89 3.4.17.14, 3.5.1.28 NU amidase activity
NBOGDFMD_01384 1.8e-30 3.4.17.14, 3.5.1.28 NU amidase activity
NBOGDFMD_01385 6.9e-179 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
NBOGDFMD_01386 7.9e-24 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
NBOGDFMD_01387 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NBOGDFMD_01388 8.6e-167 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
NBOGDFMD_01389 7.1e-127 yrrM 2.1.1.104 S O-Methyltransferase
NBOGDFMD_01390 0.0 pepF E oligoendopeptidase F
NBOGDFMD_01391 3.2e-183 coiA 3.6.4.12 S Competence protein
NBOGDFMD_01392 1.8e-164 K transcriptional regulator (lysR family)
NBOGDFMD_01393 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NBOGDFMD_01397 8e-191 phoH T phosphate starvation-inducible protein PhoH
NBOGDFMD_01398 2.3e-61 rlpA M LysM domain protein
NBOGDFMD_01399 3.9e-121 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
NBOGDFMD_01400 1.6e-34 yozE S Belongs to the UPF0346 family
NBOGDFMD_01401 2e-160 cvfB S Protein conserved in bacteria
NBOGDFMD_01402 3.8e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NBOGDFMD_01403 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
NBOGDFMD_01404 3.2e-78 sptS 2.7.13.3 T Histidine kinase
NBOGDFMD_01405 2.2e-18 K Acetyltransferase (GNAT) family
NBOGDFMD_01406 0.0 lmrA2 V abc transporter atp-binding protein
NBOGDFMD_01407 0.0 lmrA1 V abc transporter atp-binding protein
NBOGDFMD_01408 1.9e-77 K DNA-binding transcription factor activity
NBOGDFMD_01409 1e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
NBOGDFMD_01410 1.8e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
NBOGDFMD_01411 3.8e-212 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
NBOGDFMD_01412 5.9e-140 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
NBOGDFMD_01413 1.6e-24 U response to pH
NBOGDFMD_01414 0.0 yfmR S abc transporter atp-binding protein
NBOGDFMD_01415 9.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
NBOGDFMD_01416 3e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NBOGDFMD_01417 9.8e-91 XK27_08360 S EDD domain protein, DegV family
NBOGDFMD_01418 2.6e-64 WQ51_03320 S cog cog4835
NBOGDFMD_01419 7.7e-134 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NBOGDFMD_01420 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
NBOGDFMD_01421 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
NBOGDFMD_01422 6.4e-29 2.3.1.128 K acetyltransferase
NBOGDFMD_01423 7.2e-258 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
NBOGDFMD_01424 1.1e-294 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
NBOGDFMD_01425 6.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NBOGDFMD_01426 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
NBOGDFMD_01428 3.7e-243 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
NBOGDFMD_01429 7.9e-260 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NBOGDFMD_01430 5.3e-35 fruA 2.7.1.202 G phosphotransferase system
NBOGDFMD_01431 2.7e-126 fruA 2.7.1.202 G phosphotransferase system
NBOGDFMD_01432 2.2e-49 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
NBOGDFMD_01433 3.9e-54 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
NBOGDFMD_01434 5.5e-164 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
NBOGDFMD_01435 5.6e-114 fruR K transcriptional
NBOGDFMD_01436 1.8e-84 L Transposase
NBOGDFMD_01437 8.1e-203 rny D Endoribonuclease that initiates mRNA decay
NBOGDFMD_01438 5.2e-65 tnp L Transposase
NBOGDFMD_01439 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NBOGDFMD_01440 6.7e-139 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
NBOGDFMD_01441 4.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NBOGDFMD_01442 4.8e-257 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
NBOGDFMD_01443 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
NBOGDFMD_01444 7.7e-56 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
NBOGDFMD_01445 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
NBOGDFMD_01446 1.6e-126 IQ reductase
NBOGDFMD_01447 8.5e-165 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
NBOGDFMD_01448 5.8e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
NBOGDFMD_01449 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
NBOGDFMD_01450 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NBOGDFMD_01451 4e-72 marR K Transcriptional regulator, MarR family
NBOGDFMD_01452 2.4e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
NBOGDFMD_01453 1.9e-115 S Haloacid dehalogenase-like hydrolase
NBOGDFMD_01454 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
NBOGDFMD_01455 8e-193 asnA 6.3.1.1 E aspartate--ammonia ligase
NBOGDFMD_01456 1.4e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NBOGDFMD_01457 7.3e-133 recX 2.4.1.337 GT4 S Regulatory protein RecX
NBOGDFMD_01458 1.3e-101 ygaC J Belongs to the UPF0374 family
NBOGDFMD_01459 6.4e-108 S Domain of unknown function (DUF1803)
NBOGDFMD_01460 2.1e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
NBOGDFMD_01464 1.2e-30 L Transposase
NBOGDFMD_01471 5.7e-95
NBOGDFMD_01472 2.4e-50 J Acetyltransferase (GNAT) domain
NBOGDFMD_01473 5.2e-251 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NBOGDFMD_01474 4.5e-97 mip S hydroperoxide reductase activity
NBOGDFMD_01475 7e-203 I acyl-CoA dehydrogenase
NBOGDFMD_01476 4.3e-156 ydiA P C4-dicarboxylate transporter malic acid transport protein
NBOGDFMD_01477 1.4e-238 msrR K Transcriptional regulator
NBOGDFMD_01478 2.3e-153 pheA 4.2.1.51 E Prephenate dehydratase
NBOGDFMD_01479 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
NBOGDFMD_01480 2.6e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
NBOGDFMD_01481 3e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
NBOGDFMD_01482 3.2e-53 yheA S Belongs to the UPF0342 family
NBOGDFMD_01483 2.2e-207 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
NBOGDFMD_01484 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NBOGDFMD_01485 3.5e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NBOGDFMD_01486 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NBOGDFMD_01487 8.6e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
NBOGDFMD_01488 2e-219 ywbD 2.1.1.191 J Methyltransferase
NBOGDFMD_01489 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
NBOGDFMD_01490 2e-25 WQ51_00785
NBOGDFMD_01491 9.6e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NBOGDFMD_01492 1e-78 yueI S Protein of unknown function (DUF1694)
NBOGDFMD_01493 1.3e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
NBOGDFMD_01494 6.6e-101 yyaQ V Protein conserved in bacteria
NBOGDFMD_01495 2.8e-28 yyaQ S YjbR
NBOGDFMD_01496 4.4e-183 ccpA K Catabolite control protein A
NBOGDFMD_01497 4.2e-211 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
NBOGDFMD_01498 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
NBOGDFMD_01499 9.6e-277 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NBOGDFMD_01500 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NBOGDFMD_01501 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
NBOGDFMD_01502 2.6e-33 secG U Preprotein translocase subunit SecG
NBOGDFMD_01503 9.5e-74 mdtG EGP Major facilitator Superfamily
NBOGDFMD_01504 6e-133 mdtG EGP Major facilitator Superfamily
NBOGDFMD_01505 1.3e-105 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NBOGDFMD_01506 1.9e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
NBOGDFMD_01507 1.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NBOGDFMD_01508 1.7e-64 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
NBOGDFMD_01509 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NBOGDFMD_01510 6.8e-53 licT K transcriptional antiterminator
NBOGDFMD_01511 5.5e-62 licT K transcriptional antiterminator
NBOGDFMD_01512 4.9e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NBOGDFMD_01513 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
NBOGDFMD_01514 1.6e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NBOGDFMD_01515 3.9e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NBOGDFMD_01516 7.5e-23 I Alpha/beta hydrolase family
NBOGDFMD_01517 1.5e-35 yugF I carboxylic ester hydrolase activity
NBOGDFMD_01518 2.2e-45 K sequence-specific DNA binding
NBOGDFMD_01519 2.4e-104 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
NBOGDFMD_01520 1.5e-07
NBOGDFMD_01521 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
NBOGDFMD_01522 5.3e-78 feoA P FeoA domain protein
NBOGDFMD_01523 2.2e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
NBOGDFMD_01524 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
NBOGDFMD_01525 1.3e-34 ykuJ S protein conserved in bacteria
NBOGDFMD_01526 1.2e-180 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NBOGDFMD_01527 0.0 clpE O Belongs to the ClpA ClpB family
NBOGDFMD_01528 1.8e-86 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
NBOGDFMD_01529 3.7e-48 XK27_09445 S Domain of unknown function (DUF1827)
NBOGDFMD_01530 9.7e-66 S oxidoreductase
NBOGDFMD_01531 9.3e-59 S oxidoreductase
NBOGDFMD_01532 1.3e-232 murN 2.3.2.10, 2.3.2.16 V FemAB family
NBOGDFMD_01533 6.1e-70 M Pfam SNARE associated Golgi protein
NBOGDFMD_01534 1e-100 S Domain of Unknown Function with PDB structure (DUF3862)
NBOGDFMD_01537 8.4e-205 rpsA 1.17.7.4 J ribosomal protein S1
NBOGDFMD_01540 4.8e-16 S Protein of unknown function (DUF2969)
NBOGDFMD_01541 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
NBOGDFMD_01542 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NBOGDFMD_01543 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NBOGDFMD_01544 7.1e-102 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
NBOGDFMD_01545 4.9e-15 L Helix-hairpin-helix DNA-binding motif class 1
NBOGDFMD_01546 1.4e-29 S Domain of unknown function (DUF1912)
NBOGDFMD_01547 4.5e-177 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
NBOGDFMD_01548 1.3e-249 mmuP E amino acid
NBOGDFMD_01549 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
NBOGDFMD_01550 5.7e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NBOGDFMD_01551 9.7e-22
NBOGDFMD_01552 3.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NBOGDFMD_01553 2.2e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NBOGDFMD_01554 1.7e-218 mvaS 2.3.3.10 I synthase
NBOGDFMD_01555 2.7e-233 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
NBOGDFMD_01556 1e-25 K hmm pf08876
NBOGDFMD_01557 1.5e-118 yqfA K protein, Hemolysin III
NBOGDFMD_01558 1.2e-22 S Protein of unknown function (DUF3114)
NBOGDFMD_01559 9.8e-163 S Protein of unknown function (DUF3114)
NBOGDFMD_01560 9.9e-169 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
NBOGDFMD_01561 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NBOGDFMD_01562 4.9e-21 XK27_13030
NBOGDFMD_01563 1.8e-248 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
NBOGDFMD_01564 1.4e-192 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
NBOGDFMD_01565 1.1e-11 U protein secretion
NBOGDFMD_01566 2.1e-50 U protein secretion
NBOGDFMD_01567 3.5e-07 U protein secretion
NBOGDFMD_01569 5.9e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NBOGDFMD_01570 2.5e-21
NBOGDFMD_01571 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
NBOGDFMD_01572 5.1e-254 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NBOGDFMD_01573 8.9e-192 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
NBOGDFMD_01574 4.6e-180 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
NBOGDFMD_01575 6e-174 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
NBOGDFMD_01576 2.5e-142 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
NBOGDFMD_01577 4.6e-105 GBS0088 J protein conserved in bacteria
NBOGDFMD_01578 8e-249 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NBOGDFMD_01579 1.7e-46 ald 1.4.1.1 C Belongs to the AlaDH PNT family
NBOGDFMD_01580 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
NBOGDFMD_01581 4e-220 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
NBOGDFMD_01582 7.4e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NBOGDFMD_01583 2.5e-113 S VIT family
NBOGDFMD_01584 1.7e-142 deoD_1 2.4.2.3 F Phosphorylase superfamily
NBOGDFMD_01585 4.3e-22
NBOGDFMD_01586 1.2e-26 XK27_00085 K Transcriptional
NBOGDFMD_01587 1e-195 yceA S Belongs to the UPF0176 family
NBOGDFMD_01588 5.4e-122 sagI S ABC-2 type transporter
NBOGDFMD_01589 4.8e-168 V ABC transporter
NBOGDFMD_01590 1.1e-217 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
NBOGDFMD_01591 2.5e-132 rr02 KT response regulator
NBOGDFMD_01592 1.3e-214 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
NBOGDFMD_01593 3.4e-121 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NBOGDFMD_01594 4.6e-199 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
NBOGDFMD_01595 0.0 lmrA V abc transporter atp-binding protein
NBOGDFMD_01596 0.0 mdlB V abc transporter atp-binding protein
NBOGDFMD_01602 4.3e-25 S Bacteriocin class II with double-glycine leader peptide
NBOGDFMD_01605 8.9e-133 agrA KT phosphorelay signal transduction system
NBOGDFMD_01606 2.5e-234 blpH 2.7.13.3 T protein histidine kinase activity
NBOGDFMD_01608 7.3e-237 mesE M Transport protein ComB
NBOGDFMD_01609 9.3e-281 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NBOGDFMD_01610 2.8e-108 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NBOGDFMD_01611 0.0 mdlB V abc transporter atp-binding protein
NBOGDFMD_01612 0.0 mdlA V abc transporter atp-binding protein
NBOGDFMD_01614 1.7e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
NBOGDFMD_01615 7.9e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
NBOGDFMD_01616 2.3e-72 yutD J protein conserved in bacteria
NBOGDFMD_01617 4.3e-269 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
NBOGDFMD_01619 7.2e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
NBOGDFMD_01620 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NBOGDFMD_01621 0.0 ftsI 3.4.16.4 M penicillin-binding protein
NBOGDFMD_01622 4.3e-47 ftsL D cell division protein FtsL
NBOGDFMD_01623 3e-157 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NBOGDFMD_01624 1.6e-65
NBOGDFMD_01625 7.4e-27
NBOGDFMD_01626 2.6e-30
NBOGDFMD_01628 8.7e-33 yhaI J Protein of unknown function (DUF805)
NBOGDFMD_01629 4.5e-18 D nuclear chromosome segregation
NBOGDFMD_01630 2e-225 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NBOGDFMD_01631 1.7e-140 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NBOGDFMD_01632 2.2e-285 XK27_00765
NBOGDFMD_01633 8.1e-134 ecsA_2 V abc transporter atp-binding protein
NBOGDFMD_01634 5.2e-125 S Protein of unknown function (DUF554)
NBOGDFMD_01635 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
NBOGDFMD_01636 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
NBOGDFMD_01637 2.6e-121 liaI S membrane
NBOGDFMD_01638 5.2e-75 XK27_02470 K LytTr DNA-binding domain
NBOGDFMD_01639 3.6e-66 KT response to antibiotic
NBOGDFMD_01640 5.2e-81 yebC M Membrane
NBOGDFMD_01641 2.9e-18 yebC M Membrane
NBOGDFMD_01642 4.3e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
NBOGDFMD_01643 3.8e-173 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
NBOGDFMD_01645 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NBOGDFMD_01646 7.5e-184 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NBOGDFMD_01647 4.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NBOGDFMD_01648 1.1e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NBOGDFMD_01649 3.8e-198 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NBOGDFMD_01650 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NBOGDFMD_01652 3e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
NBOGDFMD_01653 1.2e-171 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
NBOGDFMD_01654 0.0 scrA 2.7.1.208, 2.7.1.211 G pts system
NBOGDFMD_01655 4.1e-291 scrB 3.2.1.26 GH32 G invertase
NBOGDFMD_01656 2.2e-179 scrR K Transcriptional
NBOGDFMD_01657 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NBOGDFMD_01658 3.4e-62 yqhY S protein conserved in bacteria
NBOGDFMD_01659 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NBOGDFMD_01660 3.7e-84 comEB 3.5.4.12 F ComE operon protein 2
NBOGDFMD_01661 5e-193 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
NBOGDFMD_01663 8e-44 V 'abc transporter, ATP-binding protein
NBOGDFMD_01664 3.8e-58 V 'abc transporter, ATP-binding protein
NBOGDFMD_01667 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NBOGDFMD_01668 2e-169 corA P COG0598 Mg2 and Co2 transporters
NBOGDFMD_01669 3.1e-124 XK27_01040 S Pfam PF06570
NBOGDFMD_01671 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NBOGDFMD_01672 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NBOGDFMD_01673 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
NBOGDFMD_01674 3.6e-41 XK27_05745
NBOGDFMD_01675 2.5e-230 mutY L A G-specific adenine glycosylase
NBOGDFMD_01680 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NBOGDFMD_01681 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
NBOGDFMD_01682 1e-93 cvpA S toxin biosynthetic process
NBOGDFMD_01683 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
NBOGDFMD_01684 4.7e-160 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NBOGDFMD_01685 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
NBOGDFMD_01686 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
NBOGDFMD_01687 2e-47 azlD E branched-chain amino acid
NBOGDFMD_01688 1.8e-114 azlC E AzlC protein
NBOGDFMD_01689 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NBOGDFMD_01690 4.8e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
NBOGDFMD_01691 5.6e-121 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
NBOGDFMD_01692 2.5e-33 ykzG S Belongs to the UPF0356 family
NBOGDFMD_01693 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NBOGDFMD_01694 2.7e-40 pscB M CHAP domain protein
NBOGDFMD_01695 1.5e-263 glnA 6.3.1.2 E glutamine synthetase
NBOGDFMD_01696 8.5e-63 glnR K Transcriptional regulator
NBOGDFMD_01697 1.3e-87 S Fusaric acid resistance protein-like
NBOGDFMD_01698 2.4e-26
NBOGDFMD_01699 8.2e-205 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
NBOGDFMD_01700 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
NBOGDFMD_01701 2.4e-300 hsdM 2.1.1.72 V HsdM N-terminal domain
NBOGDFMD_01702 3.9e-141 3.1.21.3 V Type I restriction modification DNA specificity domain
NBOGDFMD_01703 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
NBOGDFMD_01704 4.5e-61 cadC K helix_turn_helix, Arsenical Resistance Operon Repressor
NBOGDFMD_01705 5.7e-46 S Domain of unknown function (DUF4298)
NBOGDFMD_01706 3.1e-87 L Phage integrase family
NBOGDFMD_01707 2e-31 L PFAM Integrase, catalytic core
NBOGDFMD_01708 2.7e-13 L PFAM Integrase, catalytic core
NBOGDFMD_01710 3.3e-95 ywlG S Belongs to the UPF0340 family
NBOGDFMD_01711 1.2e-85 treR K trehalose operon
NBOGDFMD_01712 5.8e-21 treR K DNA-binding transcription factor activity
NBOGDFMD_01713 1.4e-54 treB 2.7.1.201 G PTS System
NBOGDFMD_01714 5.9e-66 treC 3.2.1.93 GH13 G COG0366 Glycosidases
NBOGDFMD_01715 1.2e-69 treC 3.2.1.93 GH13 G COG0366 Glycosidases
NBOGDFMD_01716 2.8e-38 treC 3.2.1.93 GH13 G COG0366 Glycosidases
NBOGDFMD_01717 0.0 pepO 3.4.24.71 O Peptidase family M13
NBOGDFMD_01718 1.4e-63 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
NBOGDFMD_01719 1.3e-135 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
NBOGDFMD_01720 3.5e-76 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
NBOGDFMD_01721 1.2e-35 adhE 1.1.1.1, 1.2.1.10 C hydroxyacid-oxoacid transhydrogenase activity
NBOGDFMD_01722 3.2e-65 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
NBOGDFMD_01723 1.9e-278 thrC 4.2.3.1 E Threonine synthase
NBOGDFMD_01724 3.2e-226 norN V Mate efflux family protein
NBOGDFMD_01725 1.8e-57 asp S cog cog1302
NBOGDFMD_01726 9.9e-305 yloV S kinase related to dihydroxyacetone kinase
NBOGDFMD_01727 8.4e-09 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
NBOGDFMD_01728 1.5e-280 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
NBOGDFMD_01729 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
NBOGDFMD_01730 7.7e-77 ilvN 2.2.1.6 E Acetolactate synthase
NBOGDFMD_01731 1.6e-196 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NBOGDFMD_01732 9.3e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NBOGDFMD_01733 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
NBOGDFMD_01734 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NBOGDFMD_01735 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NBOGDFMD_01736 2.9e-68 S cog cog4699
NBOGDFMD_01737 2.2e-176 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NBOGDFMD_01738 3e-145 cglB NU type II secretion system
NBOGDFMD_01739 8.5e-43 comGC U Required for transformation and DNA binding
NBOGDFMD_01740 1.8e-57 cglD NU Competence protein
NBOGDFMD_01741 1.1e-15 NU Type II secretory pathway pseudopilin
NBOGDFMD_01742 1.5e-71 comGF U Competence protein ComGF
NBOGDFMD_01743 2e-12 comGF U Putative Competence protein ComGF
NBOGDFMD_01744 5.9e-177 ytxK 2.1.1.72 L DNA methylase
NBOGDFMD_01745 2.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NBOGDFMD_01747 1.4e-33 V CAAX protease self-immunity
NBOGDFMD_01748 5e-67 V CAAX protease self-immunity
NBOGDFMD_01750 1.8e-111 S CAAX amino terminal protease family protein
NBOGDFMD_01751 3.9e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NBOGDFMD_01752 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
NBOGDFMD_01753 4.1e-09 S Domain of unknown function (DUF4651)
NBOGDFMD_01754 4.2e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
NBOGDFMD_01755 7.9e-114 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NBOGDFMD_01756 1e-190 yeeE S Sulphur transport
NBOGDFMD_01757 6.4e-37 yeeD O sulfur carrier activity
NBOGDFMD_01758 5.1e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NBOGDFMD_01759 2.7e-91 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NBOGDFMD_01761 7e-158 rrmA 2.1.1.187 Q methyltransferase
NBOGDFMD_01762 1.3e-63 S phosphatase activity
NBOGDFMD_01763 2.7e-48 S glycolate biosynthetic process
NBOGDFMD_01764 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
NBOGDFMD_01765 7.9e-221 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
NBOGDFMD_01766 9.1e-95 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NBOGDFMD_01767 5.2e-119 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
NBOGDFMD_01768 5.1e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
NBOGDFMD_01769 2e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
NBOGDFMD_01770 5.5e-64 XK27_08585 S Psort location CytoplasmicMembrane, score
NBOGDFMD_01771 3.2e-62 fnt P Formate nitrite transporter
NBOGDFMD_01772 2.3e-141 XK27_09615 C reductase
NBOGDFMD_01773 9e-62 XK27_09615 C reductase
NBOGDFMD_01774 4.3e-77 XK27_09620 S reductase
NBOGDFMD_01775 4.7e-20 XK27_09620 S FMN reductase (NADPH) activity
NBOGDFMD_01776 5.4e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
NBOGDFMD_01777 1.7e-221 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NBOGDFMD_01778 1.8e-11 WQ51_05710 S Mitochondrial biogenesis AIM24
NBOGDFMD_01779 1.4e-36 WQ51_05710 S Mitochondrial biogenesis AIM24
NBOGDFMD_01780 6.6e-87 cah 4.2.1.1 P Reversible hydration of carbon dioxide
NBOGDFMD_01781 9.2e-51 S Protein of unknown function (DUF3397)
NBOGDFMD_01782 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NBOGDFMD_01783 1.8e-119 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NBOGDFMD_01784 4.2e-74 amiA E transmembrane transport
NBOGDFMD_01785 2.8e-79 amiA E transmembrane transport
NBOGDFMD_01786 6e-282 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NBOGDFMD_01787 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
NBOGDFMD_01788 1.9e-264 argH 4.3.2.1 E Argininosuccinate lyase
NBOGDFMD_01789 7.6e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
NBOGDFMD_01790 7.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NBOGDFMD_01791 2e-186 jag S RNA-binding protein
NBOGDFMD_01792 6.3e-34 L Integrase core domain protein
NBOGDFMD_01793 3.6e-230 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
NBOGDFMD_01794 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NBOGDFMD_01795 3.9e-237 dltB M Membrane protein involved in D-alanine export
NBOGDFMD_01796 1.4e-297 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NBOGDFMD_01797 1.7e-09 S D-Ala-teichoic acid biosynthesis protein
NBOGDFMD_01798 0.0 XK27_10035 V abc transporter atp-binding protein
NBOGDFMD_01799 0.0 yfiB1 V abc transporter atp-binding protein
NBOGDFMD_01800 6.6e-105 pvaA M lytic transglycosylase activity
NBOGDFMD_01801 1.2e-177 ndpA S 37-kD nucleoid-associated bacterial protein
NBOGDFMD_01802 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NBOGDFMD_01803 9.7e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
NBOGDFMD_01804 1.2e-154 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NBOGDFMD_01805 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NBOGDFMD_01806 2.4e-112 tdk 2.7.1.21 F thymidine kinase
NBOGDFMD_01807 1.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NBOGDFMD_01808 3.1e-155 gst O Glutathione S-transferase
NBOGDFMD_01809 1e-184 nrnA 3.1.13.3, 3.1.3.7 S domain protein
NBOGDFMD_01810 1.5e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NBOGDFMD_01811 2e-45 rpmE2 J 50S ribosomal protein L31
NBOGDFMD_01812 3.6e-230 mntH P Mn2 and Fe2 transporters of the NRAMP family
NBOGDFMD_01813 8.4e-10
NBOGDFMD_01814 5.5e-30
NBOGDFMD_01815 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NBOGDFMD_01816 1.8e-135 divIVA D Cell division protein DivIVA
NBOGDFMD_01817 1.2e-143 ylmH T S4 RNA-binding domain
NBOGDFMD_01818 2.6e-34 yggT D integral membrane protein
NBOGDFMD_01819 6.8e-96 sepF D cell septum assembly
NBOGDFMD_01820 2.3e-122 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NBOGDFMD_01821 5.4e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NBOGDFMD_01822 8e-252 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
NBOGDFMD_01823 9.7e-171 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
NBOGDFMD_01824 1e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NBOGDFMD_01825 4.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NBOGDFMD_01827 0.0 typA T GTP-binding protein TypA
NBOGDFMD_01828 2.2e-179 glk 2.7.1.2 G Glucokinase
NBOGDFMD_01829 8.4e-28 yqgQ S protein conserved in bacteria
NBOGDFMD_01830 1.1e-80 perR P Belongs to the Fur family
NBOGDFMD_01831 3.5e-91 dps P Belongs to the Dps family
NBOGDFMD_01832 4.4e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
NBOGDFMD_01833 2e-186 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
NBOGDFMD_01834 8.5e-113 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
NBOGDFMD_01835 1.2e-183 holA 2.7.7.7 L DNA polymerase III delta subunit
NBOGDFMD_01836 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NBOGDFMD_01837 6.2e-56 S Domain of unknown function (DUF4430)
NBOGDFMD_01838 1.8e-73 S Psort location CytoplasmicMembrane, score
NBOGDFMD_01839 6.4e-133 htpX O Belongs to the peptidase M48B family
NBOGDFMD_01840 9e-93 lemA S LemA family
NBOGDFMD_01841 9.9e-90 spd F DNA RNA non-specific endonuclease
NBOGDFMD_01842 4.8e-61 spd F DNA RNA non-specific endonuclease
NBOGDFMD_01844 9.6e-305 hsdM 2.1.1.72 V type I restriction-modification system
NBOGDFMD_01845 3e-131 S Protein conserved in bacteria
NBOGDFMD_01846 0.0 S KAP family P-loop domain
NBOGDFMD_01847 2.8e-131 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
NBOGDFMD_01848 5.3e-08
NBOGDFMD_01850 1.4e-68
NBOGDFMD_01851 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
NBOGDFMD_01852 2.5e-103 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
NBOGDFMD_01854 4.7e-23 MA20_36090 S Protein of unknown function (DUF2974)
NBOGDFMD_01855 1.7e-10 MA20_36090 S Protein of unknown function (DUF2974)
NBOGDFMD_01856 6.1e-114 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NBOGDFMD_01857 2.7e-27 P Hemerythrin HHE cation binding domain protein
NBOGDFMD_01858 4.5e-145 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
NBOGDFMD_01859 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NBOGDFMD_01860 4.3e-115 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
NBOGDFMD_01861 1.5e-174 S hydrolase
NBOGDFMD_01862 7.6e-16
NBOGDFMD_01863 1e-163 M LysM domain
NBOGDFMD_01864 9.9e-288 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
NBOGDFMD_01866 3.2e-09 Q the current gene model (or a revised gene model) may contain a frame shift
NBOGDFMD_01867 2.7e-26 Q the current gene model (or a revised gene model) may contain a frame shift
NBOGDFMD_01868 6.9e-41 Q the current gene model (or a revised gene model) may contain a frame shift
NBOGDFMD_01870 1.6e-16 S Domain of unknown function (DUF4649)
NBOGDFMD_01871 3.3e-178 XK27_08835 S ABC transporter substrate binding protein
NBOGDFMD_01872 4e-148 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
NBOGDFMD_01873 1.2e-135 XK27_08845 S abc transporter atp-binding protein
NBOGDFMD_01874 3.5e-310 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NBOGDFMD_01875 3.5e-151 estA CE1 S Putative esterase
NBOGDFMD_01876 4.7e-126 XK27_08875 O Zinc-dependent metalloprotease
NBOGDFMD_01878 2.3e-75 fld C Flavodoxin
NBOGDFMD_01879 6.4e-282 clcA P Chloride transporter, ClC family
NBOGDFMD_01880 8.7e-41 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
NBOGDFMD_01881 2.1e-219 XK27_05110 P chloride
NBOGDFMD_01882 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NBOGDFMD_01885 2.1e-19 WQ51_02665 S Protein of unknown function (DUF3042)
NBOGDFMD_01886 1.9e-164 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NBOGDFMD_01887 1.6e-88 ytsP 1.8.4.14 T GAF domain-containing protein
NBOGDFMD_01888 3.2e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NBOGDFMD_01889 4.2e-175 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
NBOGDFMD_01890 2.1e-203 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NBOGDFMD_01891 8.3e-28 G Domain of unknown function (DUF4832)
NBOGDFMD_01892 6e-196 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NBOGDFMD_01894 1.1e-231 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NBOGDFMD_01895 1.2e-25 epuA S DNA-directed RNA polymerase subunit beta
NBOGDFMD_01896 2.4e-124 endA F DNA RNA non-specific endonuclease
NBOGDFMD_01897 5e-111 tcyB_2 P ABC transporter (permease)
NBOGDFMD_01898 5.9e-118 gltJ P ABC transporter (Permease
NBOGDFMD_01899 3.1e-150 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
NBOGDFMD_01900 2.1e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
NBOGDFMD_01901 9.9e-129 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NBOGDFMD_01902 1.5e-247 vicK 2.7.13.3 T Histidine kinase
NBOGDFMD_01903 1e-153 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
NBOGDFMD_01904 9e-231 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
NBOGDFMD_01905 9.2e-147 yidA S hydrolases of the HAD superfamily
NBOGDFMD_01906 3.6e-45 XK27_00115 2.3.1.128 K acetyltransferase
NBOGDFMD_01907 2.6e-67 ywiB S Domain of unknown function (DUF1934)
NBOGDFMD_01908 0.0 pacL 3.6.3.8 P cation transport ATPase
NBOGDFMD_01909 5.2e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
NBOGDFMD_01910 4.3e-180 yjjH S Calcineurin-like phosphoesterase
NBOGDFMD_01911 1.2e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NBOGDFMD_01912 7.4e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NBOGDFMD_01913 2.5e-124 ftsE D cell division ATP-binding protein FtsE
NBOGDFMD_01914 3.6e-163 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
NBOGDFMD_01915 4.6e-93 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
NBOGDFMD_01916 6.2e-176 yubA S permease
NBOGDFMD_01917 3.7e-224 G COG0457 FOG TPR repeat
NBOGDFMD_01918 4.2e-98 lepB 3.4.21.89 U Belongs to the peptidase S26 family
NBOGDFMD_01919 1.4e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
NBOGDFMD_01920 2.9e-90 ebsA S Family of unknown function (DUF5322)
NBOGDFMD_01921 3.9e-15 M LysM domain
NBOGDFMD_01922 6.6e-122 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
NBOGDFMD_01923 3.5e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NBOGDFMD_01924 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
NBOGDFMD_01925 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NBOGDFMD_01926 4.7e-24 L Transposase
NBOGDFMD_01927 6.9e-86 XK27_03610 K Gnat family
NBOGDFMD_01928 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
NBOGDFMD_01929 8.2e-276 pepV 3.5.1.18 E Dipeptidase
NBOGDFMD_01930 2.4e-112 ung2 3.2.2.27 L Uracil-DNA glycosylase
NBOGDFMD_01931 6.1e-22 V Glucan-binding protein C
NBOGDFMD_01933 1.7e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NBOGDFMD_01934 8.1e-232 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
NBOGDFMD_01935 8.1e-41 S Protein of unknown function (DUF1697)
NBOGDFMD_01936 4e-150 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
NBOGDFMD_01937 4e-64 clcA_2 P chloride
NBOGDFMD_01938 3.7e-67 yfeJ 6.3.5.2 F glutamine amidotransferase
NBOGDFMD_01939 7e-38 yfeJ 6.3.5.2 F glutamine amidotransferase
NBOGDFMD_01940 2e-129 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)