ORF_ID e_value Gene_name EC_number CAZy COGs Description
AFPILHDD_00002 2.2e-122 yfbR S HD containing hydrolase-like enzyme
AFPILHDD_00003 2.4e-161 L HNH nucleases
AFPILHDD_00004 3.3e-138 glnQ E ABC transporter, ATP-binding protein
AFPILHDD_00005 2.9e-293 glnP P ABC transporter permease
AFPILHDD_00006 3.3e-123 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
AFPILHDD_00007 8.2e-63 yeaO S Protein of unknown function, DUF488
AFPILHDD_00008 3.8e-121 terC P Integral membrane protein TerC family
AFPILHDD_00009 6.4e-93 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
AFPILHDD_00010 6.6e-133 cobB K SIR2 family
AFPILHDD_00011 3.5e-85
AFPILHDD_00012 1.3e-284 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AFPILHDD_00013 1e-178 S Alpha/beta hydrolase of unknown function (DUF915)
AFPILHDD_00014 5.6e-146 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AFPILHDD_00015 9.7e-140 ypuA S Protein of unknown function (DUF1002)
AFPILHDD_00016 3.4e-149 epsV 2.7.8.12 S glycosyl transferase family 2
AFPILHDD_00017 3.3e-126 S Alpha/beta hydrolase family
AFPILHDD_00018 7.8e-117 GM NmrA-like family
AFPILHDD_00019 1.4e-64
AFPILHDD_00020 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AFPILHDD_00021 1.7e-122 luxT K Bacterial regulatory proteins, tetR family
AFPILHDD_00022 1e-129
AFPILHDD_00023 2.9e-263 glnPH2 P ABC transporter permease
AFPILHDD_00024 8.1e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFPILHDD_00025 2.2e-232 S Cysteine-rich secretory protein family
AFPILHDD_00026 4.7e-207 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
AFPILHDD_00027 5.4e-93
AFPILHDD_00028 9.7e-203 yibE S overlaps another CDS with the same product name
AFPILHDD_00029 1.2e-130 yibF S overlaps another CDS with the same product name
AFPILHDD_00030 1.9e-160 I alpha/beta hydrolase fold
AFPILHDD_00031 5.7e-29
AFPILHDD_00032 0.0 G Belongs to the glycosyl hydrolase 31 family
AFPILHDD_00033 5.7e-80 ntd 2.4.2.6 F Nucleoside
AFPILHDD_00034 4.9e-90 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AFPILHDD_00035 2.6e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
AFPILHDD_00036 8.5e-87 uspA T universal stress protein
AFPILHDD_00037 9.9e-153 phnD P Phosphonate ABC transporter
AFPILHDD_00038 5.2e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AFPILHDD_00039 9.1e-131 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
AFPILHDD_00040 1.2e-149 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
AFPILHDD_00041 2e-108 tag 3.2.2.20 L glycosylase
AFPILHDD_00042 2.5e-83
AFPILHDD_00043 1.3e-273 S Calcineurin-like phosphoesterase
AFPILHDD_00044 0.0 asnB 6.3.5.4 E Asparagine synthase
AFPILHDD_00045 2.1e-254 yxbA 6.3.1.12 S ATP-grasp enzyme
AFPILHDD_00048 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
AFPILHDD_00049 1.6e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AFPILHDD_00050 3.5e-100 S Iron-sulfur cluster assembly protein
AFPILHDD_00051 6.1e-232 XK27_04775 S PAS domain
AFPILHDD_00052 6.1e-227 yttB EGP Major facilitator Superfamily
AFPILHDD_00053 0.0 pepO 3.4.24.71 O Peptidase family M13
AFPILHDD_00054 0.0 kup P Transport of potassium into the cell
AFPILHDD_00055 6.6e-75
AFPILHDD_00057 6.7e-28
AFPILHDD_00058 4.4e-157 S SLAP domain
AFPILHDD_00060 2.8e-10 K DNA-templated transcription, initiation
AFPILHDD_00061 9.8e-12 K DNA-templated transcription, initiation
AFPILHDD_00062 1.1e-99
AFPILHDD_00063 7.2e-220 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AFPILHDD_00064 7.4e-208 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
AFPILHDD_00065 0.0 yjbQ P TrkA C-terminal domain protein
AFPILHDD_00066 2.4e-116 gepA K Protein of unknown function (DUF4065)
AFPILHDD_00067 4.9e-179 S Oxidoreductase family, NAD-binding Rossmann fold
AFPILHDD_00068 3e-118
AFPILHDD_00069 8.6e-131
AFPILHDD_00070 4.2e-132 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AFPILHDD_00071 3e-110 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AFPILHDD_00072 1.5e-100 G Aldose 1-epimerase
AFPILHDD_00073 9.8e-200 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AFPILHDD_00074 5.6e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AFPILHDD_00075 0.0 XK27_08315 M Sulfatase
AFPILHDD_00076 9e-267 S Fibronectin type III domain
AFPILHDD_00077 6.3e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AFPILHDD_00078 3.5e-160 degV S EDD domain protein, DegV family
AFPILHDD_00079 3e-39
AFPILHDD_00080 4.8e-10
AFPILHDD_00081 0.0 FbpA K Fibronectin-binding protein
AFPILHDD_00082 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
AFPILHDD_00083 3e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
AFPILHDD_00084 2.5e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AFPILHDD_00085 7.3e-80 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AFPILHDD_00086 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
AFPILHDD_00087 7e-33
AFPILHDD_00088 1.6e-80 cpdA S Calcineurin-like phosphoesterase
AFPILHDD_00089 2.6e-87 cpdA S Calcineurin-like phosphoesterase
AFPILHDD_00090 6.5e-11 cpdA S Calcineurin-like phosphoesterase
AFPILHDD_00091 8.7e-220 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
AFPILHDD_00092 2.7e-70 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
AFPILHDD_00093 1.7e-107 ypsA S Belongs to the UPF0398 family
AFPILHDD_00094 1.2e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
AFPILHDD_00095 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
AFPILHDD_00096 9.6e-112 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AFPILHDD_00097 7.4e-115 dnaD L DnaD domain protein
AFPILHDD_00098 1.2e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
AFPILHDD_00099 2.9e-90 ypmB S Protein conserved in bacteria
AFPILHDD_00100 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
AFPILHDD_00101 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
AFPILHDD_00102 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
AFPILHDD_00103 9.6e-169 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
AFPILHDD_00104 7.5e-180 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
AFPILHDD_00105 1.6e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
AFPILHDD_00106 6.7e-187 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
AFPILHDD_00107 1.1e-261 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
AFPILHDD_00108 1.1e-178
AFPILHDD_00109 2.7e-140
AFPILHDD_00110 3e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
AFPILHDD_00111 7.8e-28
AFPILHDD_00112 9.3e-113 rarA L recombination factor protein RarA
AFPILHDD_00113 3.9e-33 rarA L recombination factor protein RarA
AFPILHDD_00114 4.9e-10 rarA L recombination factor protein RarA
AFPILHDD_00115 4.8e-35
AFPILHDD_00116 6.1e-84
AFPILHDD_00117 5e-148
AFPILHDD_00118 6.7e-148
AFPILHDD_00119 2.8e-123 skfE V ATPases associated with a variety of cellular activities
AFPILHDD_00120 3.9e-60 yvoA_1 K Transcriptional regulator, GntR family
AFPILHDD_00121 8e-243 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
AFPILHDD_00122 7.7e-154 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AFPILHDD_00123 2.9e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
AFPILHDD_00124 1.1e-29 mutT 3.6.1.55 F NUDIX domain
AFPILHDD_00125 1.2e-125 S Peptidase family M23
AFPILHDD_00126 6.4e-199 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
AFPILHDD_00127 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
AFPILHDD_00128 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
AFPILHDD_00129 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
AFPILHDD_00130 3e-136 recO L Involved in DNA repair and RecF pathway recombination
AFPILHDD_00131 1.1e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AFPILHDD_00132 1.6e-96 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AFPILHDD_00133 4.2e-175 phoH T phosphate starvation-inducible protein PhoH
AFPILHDD_00134 1.7e-67 yqeY S YqeY-like protein
AFPILHDD_00135 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
AFPILHDD_00136 5.8e-152 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
AFPILHDD_00137 6.8e-83 S Peptidase family M23
AFPILHDD_00138 9.9e-163 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
AFPILHDD_00139 1.7e-14
AFPILHDD_00140 3.6e-36
AFPILHDD_00141 1.8e-55 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
AFPILHDD_00142 3.3e-121 gntR1 K UTRA
AFPILHDD_00143 4.1e-214
AFPILHDD_00146 1.1e-133 slpX S SLAP domain
AFPILHDD_00147 9.5e-11 pfoS S Phosphotransferase system, EIIC
AFPILHDD_00148 6.9e-78 pfoS S Phosphotransferase system, EIIC
AFPILHDD_00149 1.5e-19 pfoS S Phosphotransferase system, EIIC
AFPILHDD_00151 8.8e-21 L COG2826 Transposase and inactivated derivatives, IS30 family
AFPILHDD_00152 1.2e-60 L COG2826 Transposase and inactivated derivatives, IS30 family
AFPILHDD_00153 7.3e-177 lacX 5.1.3.3 G Aldose 1-epimerase
AFPILHDD_00154 2.9e-233 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AFPILHDD_00155 9.7e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AFPILHDD_00156 3.3e-59 xerC D Phage integrase, N-terminal SAM-like domain
AFPILHDD_00157 4.8e-28 xerC D Phage integrase, N-terminal SAM-like domain
AFPILHDD_00158 4.9e-58 xerC D Phage integrase, N-terminal SAM-like domain
AFPILHDD_00159 1.9e-250 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AFPILHDD_00160 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AFPILHDD_00161 1.1e-155 dprA LU DNA protecting protein DprA
AFPILHDD_00162 2.9e-134 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AFPILHDD_00163 7.6e-160 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AFPILHDD_00164 4e-279 yjcE P Sodium proton antiporter
AFPILHDD_00165 9.3e-36 yozE S Belongs to the UPF0346 family
AFPILHDD_00166 7.7e-149 DegV S Uncharacterised protein, DegV family COG1307
AFPILHDD_00167 6.7e-114 hlyIII S protein, hemolysin III
AFPILHDD_00168 3e-226 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
AFPILHDD_00169 3.2e-161 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
AFPILHDD_00170 7.8e-230 S Tetratricopeptide repeat protein
AFPILHDD_00171 3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AFPILHDD_00172 1.1e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
AFPILHDD_00173 3.3e-209 rpsA 1.17.7.4 J Ribosomal protein S1
AFPILHDD_00174 3.5e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
AFPILHDD_00175 2.4e-30 M Lysin motif
AFPILHDD_00176 4.5e-121 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AFPILHDD_00177 1.3e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
AFPILHDD_00178 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AFPILHDD_00179 2.5e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AFPILHDD_00180 4.9e-60 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AFPILHDD_00181 4e-167 xerD D recombinase XerD
AFPILHDD_00182 5e-170 cvfB S S1 domain
AFPILHDD_00183 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
AFPILHDD_00184 1.9e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
AFPILHDD_00185 0.0 dnaE 2.7.7.7 L DNA polymerase
AFPILHDD_00186 2.5e-22 S Protein of unknown function (DUF2929)
AFPILHDD_00187 1.3e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
AFPILHDD_00188 7.6e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
AFPILHDD_00189 6.2e-33 yrvD S Lipopolysaccharide assembly protein A domain
AFPILHDD_00190 7.2e-144 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
AFPILHDD_00191 3.1e-178 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
AFPILHDD_00192 4.4e-151 I Acyltransferase
AFPILHDD_00193 1.1e-167 oatA I Acyltransferase
AFPILHDD_00194 1.4e-242 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AFPILHDD_00195 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
AFPILHDD_00196 2.5e-30 yneF S Uncharacterised protein family (UPF0154)
AFPILHDD_00197 5.1e-38 ynzC S UPF0291 protein
AFPILHDD_00198 3.6e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AFPILHDD_00199 4.8e-148 E GDSL-like Lipase/Acylhydrolase family
AFPILHDD_00200 6e-45 ung2 3.2.2.27 L Uracil-DNA glycosylase
AFPILHDD_00201 1.5e-62 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
AFPILHDD_00202 1.7e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
AFPILHDD_00203 1.5e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AFPILHDD_00204 4.5e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
AFPILHDD_00205 2.2e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AFPILHDD_00206 3.2e-56 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AFPILHDD_00207 5.2e-133 L Transposase and inactivated derivatives, IS30 family
AFPILHDD_00208 6e-72 yfnA E amino acid
AFPILHDD_00209 4.8e-114 yfnA E amino acid
AFPILHDD_00210 5.2e-44
AFPILHDD_00211 1.7e-289 pipD E Dipeptidase
AFPILHDD_00212 1.3e-166 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
AFPILHDD_00213 0.0 smc D Required for chromosome condensation and partitioning
AFPILHDD_00214 1.3e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
AFPILHDD_00215 9.4e-302 oppA E ABC transporter substrate-binding protein
AFPILHDD_00216 0.0 oppA E ABC transporter substrate-binding protein
AFPILHDD_00217 6.6e-149 oppC P Binding-protein-dependent transport system inner membrane component
AFPILHDD_00218 1.7e-176 oppB P ABC transporter permease
AFPILHDD_00219 2.8e-182 oppF P Belongs to the ABC transporter superfamily
AFPILHDD_00220 4.7e-196 oppD P Belongs to the ABC transporter superfamily
AFPILHDD_00221 3.4e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
AFPILHDD_00222 9.9e-183 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
AFPILHDD_00223 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AFPILHDD_00224 1.1e-306 yloV S DAK2 domain fusion protein YloV
AFPILHDD_00225 6.8e-57 asp S Asp23 family, cell envelope-related function
AFPILHDD_00226 1.1e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
AFPILHDD_00227 1.6e-51
AFPILHDD_00228 1.8e-127 thiN 2.7.6.2 H thiamine pyrophosphokinase
AFPILHDD_00229 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
AFPILHDD_00230 2.6e-166 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
AFPILHDD_00231 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
AFPILHDD_00232 2.4e-147 stp 3.1.3.16 T phosphatase
AFPILHDD_00233 5.8e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AFPILHDD_00234 2.7e-174 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AFPILHDD_00235 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AFPILHDD_00236 6.5e-34 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
AFPILHDD_00237 1.9e-112 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
AFPILHDD_00238 8.1e-44 6.3.3.2 S ASCH
AFPILHDD_00239 3.5e-21 6.3.3.2 S ASCH
AFPILHDD_00240 2.5e-308 recN L May be involved in recombinational repair of damaged DNA
AFPILHDD_00241 1.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
AFPILHDD_00242 2.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
AFPILHDD_00243 7.5e-36 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AFPILHDD_00244 1.2e-194 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AFPILHDD_00245 1.4e-13 S Uncharacterised protein family (UPF0236)
AFPILHDD_00246 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
AFPILHDD_00247 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
AFPILHDD_00248 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
AFPILHDD_00249 8.9e-55 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AFPILHDD_00250 3e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
AFPILHDD_00251 3.5e-157 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AFPILHDD_00252 7.6e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AFPILHDD_00253 5.1e-19
AFPILHDD_00254 2.3e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AFPILHDD_00255 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
AFPILHDD_00256 2.5e-95 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AFPILHDD_00257 2.6e-134 comFC S Competence protein
AFPILHDD_00258 3.9e-248 comFA L Helicase C-terminal domain protein
AFPILHDD_00259 2.7e-98 yvyE 3.4.13.9 S YigZ family
AFPILHDD_00260 1.6e-208 tagO 2.7.8.33, 2.7.8.35 M transferase
AFPILHDD_00261 2.8e-219 rny S Endoribonuclease that initiates mRNA decay
AFPILHDD_00262 5.5e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AFPILHDD_00263 2.5e-98 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AFPILHDD_00264 1.6e-144 ymfM S Helix-turn-helix domain
AFPILHDD_00265 1e-133 IQ Enoyl-(Acyl carrier protein) reductase
AFPILHDD_00266 3e-237 S Peptidase M16
AFPILHDD_00267 1.8e-226 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
AFPILHDD_00268 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
AFPILHDD_00269 1.4e-68 WQ51_03320 S Protein of unknown function (DUF1149)
AFPILHDD_00270 5.5e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
AFPILHDD_00271 1.9e-212 yubA S AI-2E family transporter
AFPILHDD_00272 3.7e-23 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
AFPILHDD_00273 1.5e-14 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
AFPILHDD_00274 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
AFPILHDD_00275 8.8e-203 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
AFPILHDD_00276 2.9e-109 S SNARE associated Golgi protein
AFPILHDD_00277 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
AFPILHDD_00278 4.7e-30 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AFPILHDD_00279 1.3e-88 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AFPILHDD_00280 2.7e-154 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AFPILHDD_00281 2.1e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
AFPILHDD_00282 3.3e-112 yjbK S CYTH
AFPILHDD_00283 5.1e-113 yjbH Q Thioredoxin
AFPILHDD_00284 5e-159 coiA 3.6.4.12 S Competence protein
AFPILHDD_00285 8.7e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
AFPILHDD_00286 1e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AFPILHDD_00287 1.9e-306 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AFPILHDD_00288 2.5e-40 ptsH G phosphocarrier protein HPR
AFPILHDD_00289 4.1e-26
AFPILHDD_00290 2.2e-151
AFPILHDD_00291 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AFPILHDD_00292 7e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AFPILHDD_00293 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
AFPILHDD_00294 4.8e-174 holA 2.7.7.7 L DNA polymerase III delta subunit
AFPILHDD_00295 0.0 comEC S Competence protein ComEC
AFPILHDD_00296 6.2e-83 comEA L Competence protein ComEA
AFPILHDD_00297 5.4e-192 ylbL T Belongs to the peptidase S16 family
AFPILHDD_00298 2.7e-85 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AFPILHDD_00299 2.2e-96 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
AFPILHDD_00300 8.7e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
AFPILHDD_00301 4.7e-208 ftsW D Belongs to the SEDS family
AFPILHDD_00302 0.0 typA T GTP-binding protein TypA
AFPILHDD_00303 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
AFPILHDD_00304 4.2e-33 ykzG S Belongs to the UPF0356 family
AFPILHDD_00305 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AFPILHDD_00306 2.3e-29 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
AFPILHDD_00307 3.5e-106 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
AFPILHDD_00308 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
AFPILHDD_00309 2e-104 S Repeat protein
AFPILHDD_00310 5.6e-126 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
AFPILHDD_00311 1.2e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
AFPILHDD_00312 1.4e-56 XK27_04120 S Putative amino acid metabolism
AFPILHDD_00313 2.4e-217 iscS 2.8.1.7 E Aminotransferase class V
AFPILHDD_00314 1.3e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AFPILHDD_00315 1.9e-39
AFPILHDD_00316 4.9e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
AFPILHDD_00317 2.1e-31 cspA K 'Cold-shock' DNA-binding domain
AFPILHDD_00318 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AFPILHDD_00319 1.6e-101 gpsB D DivIVA domain protein
AFPILHDD_00320 3.3e-149 ylmH S S4 domain protein
AFPILHDD_00321 9e-47 yggT S YGGT family
AFPILHDD_00322 1.3e-73 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
AFPILHDD_00323 2.6e-207 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AFPILHDD_00324 5.3e-232 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
AFPILHDD_00325 1.1e-150 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
AFPILHDD_00326 1.8e-209 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AFPILHDD_00327 4.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AFPILHDD_00328 7.1e-178 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AFPILHDD_00329 1.9e-47 ftsI 3.4.16.4 M Penicillin-binding Protein
AFPILHDD_00330 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
AFPILHDD_00331 1.4e-54 ftsL D Cell division protein FtsL
AFPILHDD_00332 2e-183 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
AFPILHDD_00333 1.8e-77 mraZ K Belongs to the MraZ family
AFPILHDD_00334 4.9e-184 S AAA domain
AFPILHDD_00335 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AFPILHDD_00336 2.5e-23
AFPILHDD_00337 1.1e-161 czcD P cation diffusion facilitator family transporter
AFPILHDD_00338 7.5e-126 pgm3 G Belongs to the phosphoglycerate mutase family
AFPILHDD_00339 6.4e-134 S membrane transporter protein
AFPILHDD_00340 9.8e-14 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
AFPILHDD_00341 2.2e-64 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
AFPILHDD_00342 1.1e-109 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
AFPILHDD_00343 3.2e-62 S Protein of unknown function (DUF805)
AFPILHDD_00344 5.8e-11 S Hypothetical protein (DUF2513)
AFPILHDD_00345 0.0 V Type II restriction enzyme, methylase subunits
AFPILHDD_00346 2.9e-187
AFPILHDD_00347 9.6e-52
AFPILHDD_00348 1.4e-206 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
AFPILHDD_00349 1.8e-90
AFPILHDD_00350 1.6e-210 repB EP Plasmid replication protein
AFPILHDD_00351 3.8e-27
AFPILHDD_00352 3.9e-198 L Phage integrase family
AFPILHDD_00353 1.6e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
AFPILHDD_00354 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AFPILHDD_00355 4.6e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
AFPILHDD_00356 6.7e-142 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AFPILHDD_00357 1.5e-152 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AFPILHDD_00358 2.2e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AFPILHDD_00359 1.1e-60 rplQ J Ribosomal protein L17
AFPILHDD_00360 4e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AFPILHDD_00361 8.8e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AFPILHDD_00362 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AFPILHDD_00363 6.6e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
AFPILHDD_00364 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AFPILHDD_00365 2.7e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
AFPILHDD_00366 4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
AFPILHDD_00367 1.5e-71 rplO J Binds to the 23S rRNA
AFPILHDD_00368 2.3e-24 rpmD J Ribosomal protein L30
AFPILHDD_00369 1.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AFPILHDD_00370 2.2e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AFPILHDD_00371 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AFPILHDD_00372 7.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AFPILHDD_00373 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AFPILHDD_00374 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AFPILHDD_00375 4.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AFPILHDD_00376 8.7e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AFPILHDD_00377 1.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AFPILHDD_00378 2.2e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
AFPILHDD_00379 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AFPILHDD_00380 2e-110 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AFPILHDD_00381 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AFPILHDD_00382 4.2e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AFPILHDD_00383 1.2e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AFPILHDD_00384 4.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
AFPILHDD_00385 2.3e-105 rplD J Forms part of the polypeptide exit tunnel
AFPILHDD_00386 6.9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AFPILHDD_00387 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
AFPILHDD_00388 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AFPILHDD_00389 6e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
AFPILHDD_00390 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AFPILHDD_00391 3.9e-122 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
AFPILHDD_00392 4e-52 L COG2963 Transposase and inactivated derivatives
AFPILHDD_00393 2e-56 L COG2963 Transposase and inactivated derivatives
AFPILHDD_00394 3.9e-46 L COG2963 Transposase and inactivated derivatives
AFPILHDD_00395 2.6e-67 snf 2.7.11.1 KL domain protein
AFPILHDD_00396 1.2e-85 dps P Belongs to the Dps family
AFPILHDD_00397 2e-94 K acetyltransferase
AFPILHDD_00398 2.5e-166 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
AFPILHDD_00399 1.1e-33 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AFPILHDD_00400 4.7e-54 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AFPILHDD_00401 4.3e-109 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AFPILHDD_00402 6.6e-84 K Bacterial regulatory proteins, tetR family
AFPILHDD_00403 3.2e-47 1.1.1.3 T phosphoserine phosphatase activity
AFPILHDD_00404 9.9e-143 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
AFPILHDD_00405 8e-39 S Hydrolases of the alpha beta superfamily
AFPILHDD_00406 1.4e-57 S Alpha beta hydrolase
AFPILHDD_00407 4e-95 K Acetyltransferase (GNAT) family
AFPILHDD_00408 5.8e-255 gor 1.8.1.7 C Glutathione reductase
AFPILHDD_00410 9.9e-117 L Integrase
AFPILHDD_00412 1.7e-90 dam 2.1.1.72 H Site-specific DNA-methyltransferase (adenine-specific)
AFPILHDD_00413 4.7e-196 L hmm pf00665
AFPILHDD_00414 1.7e-42 L Helix-turn-helix domain
AFPILHDD_00415 3.6e-73 L Helix-turn-helix domain
AFPILHDD_00416 9.1e-161 cjaA ET ABC transporter substrate-binding protein
AFPILHDD_00417 4.3e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFPILHDD_00418 4e-79 P ABC transporter permease
AFPILHDD_00419 6e-112 papP P ABC transporter, permease protein
AFPILHDD_00420 3.4e-25 S Uncharacterized protein conserved in bacteria (DUF2255)
AFPILHDD_00421 1.5e-48 hutG 3.5.3.8 E N-formylglutamate amidohydrolase
AFPILHDD_00422 3.1e-98 3.6.1.55, 3.6.1.67 F NUDIX domain
AFPILHDD_00423 3.9e-201 folP 2.5.1.15 H dihydropteroate synthase
AFPILHDD_00424 2.4e-248 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
AFPILHDD_00425 1.3e-201 folE 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 F GTP cyclohydrolase 1
AFPILHDD_00426 6.5e-57 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AFPILHDD_00427 8e-125 magIII L Base excision DNA repair protein, HhH-GPD family
AFPILHDD_00428 7.2e-43
AFPILHDD_00429 1.6e-76 K LytTr DNA-binding domain
AFPILHDD_00430 4e-53 S Protein of unknown function (DUF3021)
AFPILHDD_00431 2.2e-78 XK27_09675 K Acetyltransferase (GNAT) domain
AFPILHDD_00432 8.1e-137
AFPILHDD_00433 2.8e-46
AFPILHDD_00434 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AFPILHDD_00435 5.2e-192 V Beta-lactamase
AFPILHDD_00436 3.1e-275 pepV 3.5.1.18 E dipeptidase PepV
AFPILHDD_00437 4e-215 L COG2963 Transposase and inactivated derivatives
AFPILHDD_00438 9e-26 L Transposase
AFPILHDD_00439 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AFPILHDD_00440 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AFPILHDD_00441 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
AFPILHDD_00442 2.9e-81 yebR 1.8.4.14 T GAF domain-containing protein
AFPILHDD_00444 1.6e-08
AFPILHDD_00445 7.6e-80
AFPILHDD_00447 2.4e-300 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
AFPILHDD_00448 2.1e-196 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AFPILHDD_00449 3.1e-164 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AFPILHDD_00450 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AFPILHDD_00451 2.2e-240 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
AFPILHDD_00452 4.1e-62 yabR J S1 RNA binding domain
AFPILHDD_00453 9.8e-59 divIC D Septum formation initiator
AFPILHDD_00454 5.4e-34 yabO J S4 domain protein
AFPILHDD_00455 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AFPILHDD_00456 1.7e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
AFPILHDD_00457 3.3e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AFPILHDD_00458 1.7e-128 S (CBS) domain
AFPILHDD_00459 9.7e-92 K transcriptional regulator
AFPILHDD_00460 5.3e-217 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AFPILHDD_00461 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
AFPILHDD_00462 1.9e-254 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
AFPILHDD_00463 5.3e-264 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
AFPILHDD_00464 1.9e-39 rpmE2 J Ribosomal protein L31
AFPILHDD_00465 9.1e-158 S Sucrose-6F-phosphate phosphohydrolase
AFPILHDD_00466 8.5e-56 L Transposase
AFPILHDD_00467 3.1e-152 mdlA V ABC transporter
AFPILHDD_00468 2.8e-87 mdlB V ABC transporter
AFPILHDD_00469 2.8e-154 mdlB V ABC transporter
AFPILHDD_00470 0.0 pepO 3.4.24.71 O Peptidase family M13
AFPILHDD_00471 1.4e-231 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
AFPILHDD_00472 4.1e-115 plsC 2.3.1.51 I Acyltransferase
AFPILHDD_00473 3.8e-198 yabB 2.1.1.223 L Methyltransferase small domain
AFPILHDD_00474 4.2e-141 rpsB J Belongs to the universal ribosomal protein uS2 family
AFPILHDD_00475 2.2e-185 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AFPILHDD_00476 1.8e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
AFPILHDD_00477 4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
AFPILHDD_00478 1.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AFPILHDD_00479 1.6e-146 cdsA 2.7.7.41 I Belongs to the CDS family
AFPILHDD_00480 2e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
AFPILHDD_00481 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
AFPILHDD_00482 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AFPILHDD_00483 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
AFPILHDD_00484 4.2e-201 nusA K Participates in both transcription termination and antitermination
AFPILHDD_00485 8.8e-47 ylxR K Protein of unknown function (DUF448)
AFPILHDD_00486 1.2e-46 rplGA J ribosomal protein
AFPILHDD_00487 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AFPILHDD_00488 4.3e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AFPILHDD_00489 2e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AFPILHDD_00490 2.1e-182 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
AFPILHDD_00491 2.5e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
AFPILHDD_00492 5.1e-78 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AFPILHDD_00493 0.0 dnaK O Heat shock 70 kDa protein
AFPILHDD_00494 7.6e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
AFPILHDD_00495 6.9e-71 S Enterocin A Immunity
AFPILHDD_00496 4.1e-115 S Archaea bacterial proteins of unknown function
AFPILHDD_00497 4.2e-146 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
AFPILHDD_00498 3.2e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AFPILHDD_00499 1.4e-209 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
AFPILHDD_00500 5.1e-122 K response regulator
AFPILHDD_00501 0.0 V ABC transporter
AFPILHDD_00502 5.8e-308 V ABC transporter, ATP-binding protein
AFPILHDD_00503 8.9e-139 XK27_01040 S Protein of unknown function (DUF1129)
AFPILHDD_00504 1.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
AFPILHDD_00505 1.1e-43 yyzM S Bacterial protein of unknown function (DUF951)
AFPILHDD_00506 2.9e-154 spo0J K Belongs to the ParB family
AFPILHDD_00507 3.4e-138 soj D Sporulation initiation inhibitor
AFPILHDD_00508 1.6e-149 noc K Belongs to the ParB family
AFPILHDD_00509 1.4e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
AFPILHDD_00510 6.6e-85 cvpA S Colicin V production protein
AFPILHDD_00511 1.7e-181 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
AFPILHDD_00512 6.7e-150 3.1.3.48 T Tyrosine phosphatase family
AFPILHDD_00513 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
AFPILHDD_00514 5.3e-98 nqr 1.5.1.36 S NADPH-dependent FMN reductase
AFPILHDD_00515 1.4e-216 G Major Facilitator Superfamily
AFPILHDD_00516 4.2e-138 S Uncharacterised protein family (UPF0236)
AFPILHDD_00517 7.9e-78 S Uncharacterised protein family (UPF0236)
AFPILHDD_00518 5.2e-70 S Uncharacterised protein family (UPF0236)
AFPILHDD_00519 1.2e-18
AFPILHDD_00520 6.1e-40 V ABC transporter transmembrane region
AFPILHDD_00521 3.8e-94 V ABC transporter transmembrane region
AFPILHDD_00523 1.4e-190 tcsA S ABC transporter substrate-binding protein PnrA-like
AFPILHDD_00524 8.8e-279 xylG 3.6.3.17 S ABC transporter
AFPILHDD_00525 6.5e-202 yufP S Belongs to the binding-protein-dependent transport system permease family
AFPILHDD_00526 4.7e-166 yufQ S Belongs to the binding-protein-dependent transport system permease family
AFPILHDD_00527 8.4e-143 K SIS domain
AFPILHDD_00528 1.2e-53
AFPILHDD_00530 1.6e-257 pepC 3.4.22.40 E aminopeptidase
AFPILHDD_00531 9.8e-123 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
AFPILHDD_00532 5.5e-300 oppA E ABC transporter, substratebinding protein
AFPILHDD_00533 1.6e-307 oppA E ABC transporter, substratebinding protein
AFPILHDD_00534 4.4e-211 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AFPILHDD_00535 2.9e-144 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
AFPILHDD_00536 4.9e-185 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
AFPILHDD_00537 9.1e-192 oppD P Belongs to the ABC transporter superfamily
AFPILHDD_00538 3.2e-175 oppF P Belongs to the ABC transporter superfamily
AFPILHDD_00539 1.8e-256 pepC 3.4.22.40 E aminopeptidase
AFPILHDD_00540 1.8e-59 hsp O Belongs to the small heat shock protein (HSP20) family
AFPILHDD_00541 1.9e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AFPILHDD_00542 6.4e-114
AFPILHDD_00544 5.3e-115 E Belongs to the SOS response-associated peptidase family
AFPILHDD_00545 2.8e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
AFPILHDD_00546 1.5e-91 comEB 3.5.4.12 F MafB19-like deaminase
AFPILHDD_00547 1.3e-106 S TPM domain
AFPILHDD_00548 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
AFPILHDD_00549 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AFPILHDD_00550 4.6e-148 tatD L hydrolase, TatD family
AFPILHDD_00551 5e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AFPILHDD_00552 3e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
AFPILHDD_00553 1e-38 veg S Biofilm formation stimulator VEG
AFPILHDD_00554 2.4e-150 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
AFPILHDD_00555 4.2e-208 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AFPILHDD_00556 5.5e-92 S SLAP domain
AFPILHDD_00557 3.2e-74 S SLAP domain
AFPILHDD_00558 1.6e-188 cggR K Putative sugar-binding domain
AFPILHDD_00559 1.3e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
AFPILHDD_00560 9.3e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
AFPILHDD_00561 5.8e-143 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AFPILHDD_00562 4.8e-96
AFPILHDD_00563 8.7e-159 ycsE S Sucrose-6F-phosphate phosphohydrolase
AFPILHDD_00564 3.3e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AFPILHDD_00565 9.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
AFPILHDD_00566 6.4e-90 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
AFPILHDD_00567 1.9e-26 dnaQ 2.7.7.7 L DNA polymerase III
AFPILHDD_00568 3.6e-42 dnaQ 2.7.7.7 L DNA polymerase III
AFPILHDD_00569 1.1e-164 murB 1.3.1.98 M Cell wall formation
AFPILHDD_00570 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AFPILHDD_00571 1.3e-129 potB P ABC transporter permease
AFPILHDD_00572 4.6e-56 potC P ABC transporter permease
AFPILHDD_00573 5.2e-67 potC P ABC transporter permease
AFPILHDD_00574 5.6e-208 potD P ABC transporter
AFPILHDD_00575 5.4e-150 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AFPILHDD_00576 2.7e-169 ybbR S YbbR-like protein
AFPILHDD_00577 1.3e-257 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AFPILHDD_00578 1.1e-150 S hydrolase
AFPILHDD_00579 3.4e-149 S Sucrose-6F-phosphate phosphohydrolase
AFPILHDD_00580 2.1e-118
AFPILHDD_00581 1.5e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AFPILHDD_00582 3.5e-216 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
AFPILHDD_00583 4.6e-64 licT K CAT RNA binding domain
AFPILHDD_00584 3e-63 licT K CAT RNA binding domain
AFPILHDD_00585 0.0 bglP G phosphotransferase system
AFPILHDD_00586 1.1e-166 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AFPILHDD_00587 2.2e-39 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AFPILHDD_00588 4.3e-61 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AFPILHDD_00589 4.3e-166 D Alpha beta
AFPILHDD_00590 1.5e-16 E Amino acid permease
AFPILHDD_00591 2.9e-163 E Amino acid permease
AFPILHDD_00592 1.7e-56 E Amino acid permease
AFPILHDD_00593 1.6e-57 pacL 3.6.3.8 P P-type ATPase
AFPILHDD_00594 7.6e-203 pacL 3.6.3.8 P P-type ATPase
AFPILHDD_00595 2.2e-168 pacL 3.6.3.8 P P-type ATPase
AFPILHDD_00596 5.6e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
AFPILHDD_00597 2.6e-261 epsU S Polysaccharide biosynthesis protein
AFPILHDD_00598 5.7e-137 M Glycosyltransferase sugar-binding region containing DXD motif
AFPILHDD_00599 2.1e-87 ydcK S Belongs to the SprT family
AFPILHDD_00601 5e-103 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
AFPILHDD_00602 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
AFPILHDD_00603 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AFPILHDD_00604 4.4e-211 camS S sex pheromone
AFPILHDD_00605 5.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AFPILHDD_00606 9.9e-261 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
AFPILHDD_00607 2.9e-276 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AFPILHDD_00608 1e-170 yegS 2.7.1.107 G Lipid kinase
AFPILHDD_00609 5.2e-108 S Protein of unknown function (DUF1211)
AFPILHDD_00610 4.9e-120 ybhL S Belongs to the BI1 family
AFPILHDD_00611 1.1e-129 L An automated process has identified a potential problem with this gene model
AFPILHDD_00612 3.5e-55
AFPILHDD_00613 9.2e-248 nhaC C Na H antiporter NhaC
AFPILHDD_00614 3.7e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AFPILHDD_00615 2.4e-136 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
AFPILHDD_00616 2e-29 cspA K Cold shock protein
AFPILHDD_00619 1.7e-95 MA20_25245 K Acetyltransferase (GNAT) domain
AFPILHDD_00620 7.4e-129 L An automated process has identified a potential problem with this gene model
AFPILHDD_00621 2.7e-69 O Belongs to the peptidase S8 family
AFPILHDD_00622 6.5e-65 O Belongs to the peptidase S8 family
AFPILHDD_00623 2.5e-35 infB UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_00624 6.8e-18 infB UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_00625 9.6e-35 infB UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_00626 2.7e-19 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_00627 1.4e-57 CO Thioredoxin
AFPILHDD_00628 9.4e-118 M1-798 K Rhodanese Homology Domain
AFPILHDD_00629 4.1e-175 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
AFPILHDD_00630 1.7e-10 frnE Q DSBA-like thioredoxin domain
AFPILHDD_00631 1.2e-18 frnE Q DSBA-like thioredoxin domain
AFPILHDD_00632 2.4e-29 Q DSBA-like thioredoxin domain
AFPILHDD_00633 1.6e-27 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AFPILHDD_00634 1e-31 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
AFPILHDD_00635 3.4e-49 pspC KT PspC domain
AFPILHDD_00637 2.2e-243 dacA 3.4.16.4 M Belongs to the peptidase S11 family
AFPILHDD_00638 4.3e-155 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AFPILHDD_00639 1.5e-110 M ErfK YbiS YcfS YnhG
AFPILHDD_00640 2.1e-85 padR K Virulence activator alpha C-term
AFPILHDD_00641 2.2e-104 padC Q Phenolic acid decarboxylase
AFPILHDD_00642 3.9e-113 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AFPILHDD_00644 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
AFPILHDD_00645 3.5e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
AFPILHDD_00646 1.7e-90 3.6.1.55 L NUDIX domain
AFPILHDD_00647 1.1e-38
AFPILHDD_00648 1.7e-31
AFPILHDD_00649 4.5e-270 V ABC-type multidrug transport system, ATPase and permease components
AFPILHDD_00650 3.4e-286 V ABC-type multidrug transport system, ATPase and permease components
AFPILHDD_00652 4.4e-16 L PFAM IS66 Orf2 family protein
AFPILHDD_00653 1.2e-08
AFPILHDD_00654 3.3e-14 S Phage derived protein Gp49-like (DUF891)
AFPILHDD_00655 2.6e-46 K Helix-turn-helix XRE-family like proteins
AFPILHDD_00656 5.3e-43
AFPILHDD_00657 1.7e-32 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
AFPILHDD_00658 2.3e-243 L Probable transposase
AFPILHDD_00659 8.7e-15 S Fic/DOC family
AFPILHDD_00660 3.3e-71 L IS1381, transposase OrfA
AFPILHDD_00661 1.9e-33 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AFPILHDD_00662 2.6e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
AFPILHDD_00663 4.2e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
AFPILHDD_00664 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AFPILHDD_00665 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AFPILHDD_00666 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AFPILHDD_00667 1.3e-34 yaaA S S4 domain protein YaaA
AFPILHDD_00668 8.8e-196 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
AFPILHDD_00669 6.8e-259 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AFPILHDD_00670 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
AFPILHDD_00671 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
AFPILHDD_00672 6.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AFPILHDD_00673 5.6e-253 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AFPILHDD_00674 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
AFPILHDD_00675 2.2e-273 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AFPILHDD_00676 2.1e-288 clcA P chloride
AFPILHDD_00677 1.7e-212
AFPILHDD_00678 1.2e-18
AFPILHDD_00679 3.4e-156 EGP Sugar (and other) transporter
AFPILHDD_00680 2.2e-36 EGP Sugar (and other) transporter
AFPILHDD_00681 0.0 copA 3.6.3.54 P P-type ATPase
AFPILHDD_00682 1.4e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
AFPILHDD_00683 1.2e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
AFPILHDD_00684 9.3e-77 atkY K Penicillinase repressor
AFPILHDD_00685 2.3e-35
AFPILHDD_00686 1.5e-223 pbuG S permease
AFPILHDD_00687 1.2e-35 L An automated process has identified a potential problem with this gene model
AFPILHDD_00688 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
AFPILHDD_00689 3.2e-247 ynbB 4.4.1.1 P aluminum resistance
AFPILHDD_00690 1.5e-77 ktrB P Potassium uptake protein
AFPILHDD_00691 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
AFPILHDD_00692 1.3e-81 C Flavodoxin
AFPILHDD_00693 1.5e-112 3.6.1.27 I Acid phosphatase homologues
AFPILHDD_00694 2.7e-106 lacA 2.3.1.79 S Transferase hexapeptide repeat
AFPILHDD_00695 5.7e-208 pbpX1 V Beta-lactamase
AFPILHDD_00696 5.1e-153 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
AFPILHDD_00697 4e-93 S ECF-type riboflavin transporter, S component
AFPILHDD_00698 9.9e-230 S Putative peptidoglycan binding domain
AFPILHDD_00699 3.3e-220 mepA V MATE efflux family protein
AFPILHDD_00700 1e-256 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
AFPILHDD_00701 2.2e-34
AFPILHDD_00702 9.7e-61
AFPILHDD_00703 8.3e-91
AFPILHDD_00704 1.7e-57
AFPILHDD_00705 2.1e-108 S Fic/DOC family
AFPILHDD_00706 5.9e-103
AFPILHDD_00707 6.1e-208 EGP Major facilitator Superfamily
AFPILHDD_00708 1.6e-134
AFPILHDD_00709 4.3e-56
AFPILHDD_00710 9.4e-80 K Acetyltransferase (GNAT) domain
AFPILHDD_00712 1.8e-65 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
AFPILHDD_00713 6.2e-145 2.4.2.3 F Phosphorylase superfamily
AFPILHDD_00714 4.3e-120 XK27_07525 3.6.1.55 F NUDIX domain
AFPILHDD_00715 1.3e-63
AFPILHDD_00716 2.6e-83 S Domain of unknown function (DUF5067)
AFPILHDD_00717 9.7e-97 L An automated process has identified a potential problem with this gene model
AFPILHDD_00718 2.4e-19 S D-Ala-teichoic acid biosynthesis protein
AFPILHDD_00719 2.5e-294 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AFPILHDD_00720 3e-242 dltB M MBOAT, membrane-bound O-acyltransferase family
AFPILHDD_00721 5.7e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AFPILHDD_00722 3.5e-249 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AFPILHDD_00723 3.2e-175 pbpX2 V Beta-lactamase
AFPILHDD_00726 1.1e-127 S CAAX protease self-immunity
AFPILHDD_00727 4.9e-29
AFPILHDD_00728 1.9e-50
AFPILHDD_00729 1.2e-18
AFPILHDD_00730 2.2e-125 S Protein of unknown function (DUF975)
AFPILHDD_00731 3.6e-146 lysA2 M Glycosyl hydrolases family 25
AFPILHDD_00732 3.3e-289 ytgP S Polysaccharide biosynthesis protein
AFPILHDD_00733 1.1e-36
AFPILHDD_00734 1.1e-228 XK27_06780 V ABC transporter permease
AFPILHDD_00735 1.3e-113 XK27_06780 V ABC transporter permease
AFPILHDD_00736 5.4e-124 XK27_06785 V ABC transporter, ATP-binding protein
AFPILHDD_00737 8.7e-213 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AFPILHDD_00738 7.2e-172 S Alpha/beta hydrolase of unknown function (DUF915)
AFPILHDD_00739 0.0 clpE O AAA domain (Cdc48 subfamily)
AFPILHDD_00740 4.9e-119 lepB 3.4.21.89 U Belongs to the peptidase S26 family
AFPILHDD_00741 6.9e-128
AFPILHDD_00742 3.2e-155 cycA E Amino acid permease
AFPILHDD_00743 4.6e-46 cycA E Amino acid permease
AFPILHDD_00744 3.9e-246 yifK E Amino acid permease
AFPILHDD_00746 1.1e-95
AFPILHDD_00747 1.6e-91
AFPILHDD_00748 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AFPILHDD_00749 4e-167 dnaI L Primosomal protein DnaI
AFPILHDD_00750 2.1e-249 dnaB L Replication initiation and membrane attachment
AFPILHDD_00751 4.1e-83 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AFPILHDD_00752 4.5e-106 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AFPILHDD_00753 5.3e-158 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
AFPILHDD_00754 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AFPILHDD_00755 1e-28 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AFPILHDD_00756 3e-123 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AFPILHDD_00757 1.8e-49 cas4 3.1.12.1 L Domain of unknown function DUF83
AFPILHDD_00758 2.2e-180 cas3 L CRISPR-associated helicase cas3
AFPILHDD_00759 1.1e-66 cas5t L CRISPR-associated protein Cas5
AFPILHDD_00760 1.3e-104 cst2 L CRISPR-associated negative auto-regulator DevR/Csa2
AFPILHDD_00761 1.5e-106 cst1 S CRISPR-associated protein (Cas_CXXC_CXXC)
AFPILHDD_00762 4e-43 cas6 L CRISPR associated protein Cas6
AFPILHDD_00763 1.4e-141 purD 6.3.4.13 F Belongs to the GARS family
AFPILHDD_00764 2.2e-37 L Transposase
AFPILHDD_00765 6e-100
AFPILHDD_00766 4.2e-278 S O-antigen ligase like membrane protein
AFPILHDD_00767 2.5e-25
AFPILHDD_00768 5.2e-93 gmk2 2.7.4.8 F Guanylate kinase homologues.
AFPILHDD_00769 1.4e-90 M NlpC/P60 family
AFPILHDD_00770 3.4e-29 S Archaea bacterial proteins of unknown function
AFPILHDD_00771 2.7e-59 S Archaea bacterial proteins of unknown function
AFPILHDD_00772 8.3e-123 M NlpC P60 family protein
AFPILHDD_00773 7.4e-140 M NlpC/P60 family
AFPILHDD_00775 1.1e-199 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AFPILHDD_00776 4.1e-179 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AFPILHDD_00777 6.3e-141 epsB M biosynthesis protein
AFPILHDD_00778 6.9e-115 ywqD 2.7.10.1 D Capsular exopolysaccharide family
AFPILHDD_00779 1.8e-144 ywqE 3.1.3.48 GM PHP domain protein
AFPILHDD_00780 4.1e-121 rfbP M Bacterial sugar transferase
AFPILHDD_00781 2.9e-81 cpsF M Oligosaccharide biosynthesis protein Alg14 like
AFPILHDD_00782 6.1e-77 pssE S Glycosyltransferase family 28 C-terminal domain
AFPILHDD_00783 3.9e-35 S Glycosyltransferase like family 2
AFPILHDD_00784 5e-103 M Glycosyl transferases group 1
AFPILHDD_00785 1.4e-35 GT2 M Glycosyltransferase like family 2
AFPILHDD_00786 7.8e-38 MA20_17390 GT4 M Glycosyl transferases group 1
AFPILHDD_00787 2.7e-32 cps3F
AFPILHDD_00788 5.9e-82 M Glycosyl transferase family 2
AFPILHDD_00789 1.1e-95 L An automated process has identified a potential problem with this gene model
AFPILHDD_00790 2.4e-86 L Transposase
AFPILHDD_00791 1.2e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
AFPILHDD_00792 4.6e-54 trxA O Belongs to the thioredoxin family
AFPILHDD_00793 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AFPILHDD_00794 6.2e-51 yrzB S Belongs to the UPF0473 family
AFPILHDD_00795 3.6e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AFPILHDD_00796 2e-42 yrzL S Belongs to the UPF0297 family
AFPILHDD_00797 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AFPILHDD_00798 1.3e-230 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
AFPILHDD_00799 1.6e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
AFPILHDD_00800 7.1e-214 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AFPILHDD_00801 3.9e-289 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AFPILHDD_00802 7.5e-39 yajC U Preprotein translocase
AFPILHDD_00803 6.1e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
AFPILHDD_00804 7e-104 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
AFPILHDD_00805 6.1e-263 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AFPILHDD_00806 3.8e-20 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AFPILHDD_00807 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AFPILHDD_00808 7.2e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
AFPILHDD_00809 3.9e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AFPILHDD_00810 3e-116 sip L Belongs to the 'phage' integrase family
AFPILHDD_00811 4.1e-26 L Transposase
AFPILHDD_00812 1.5e-178 ABC-SBP S ABC transporter
AFPILHDD_00813 1.7e-122 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
AFPILHDD_00814 9.6e-138 XK27_08845 S ABC transporter, ATP-binding protein
AFPILHDD_00815 4.1e-41
AFPILHDD_00816 4.8e-11
AFPILHDD_00817 6.2e-105 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
AFPILHDD_00818 2.2e-177 K AI-2E family transporter
AFPILHDD_00819 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
AFPILHDD_00820 2.1e-67 S Domain of unknown function (DUF4430)
AFPILHDD_00821 1.4e-87 S ECF transporter, substrate-specific component
AFPILHDD_00822 1.3e-99 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
AFPILHDD_00823 1.6e-148 S Putative ABC-transporter type IV
AFPILHDD_00824 2.8e-236 S LPXTG cell wall anchor motif
AFPILHDD_00825 4.1e-29 pipD E Dipeptidase
AFPILHDD_00826 1.5e-77 pipD E Dipeptidase
AFPILHDD_00827 4.5e-30 pipD E Dipeptidase
AFPILHDD_00828 2.8e-254 V Restriction endonuclease
AFPILHDD_00829 2.3e-107 K Bacterial regulatory proteins, tetR family
AFPILHDD_00830 3e-23 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AFPILHDD_00831 8.6e-145 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AFPILHDD_00832 3e-131 ybbM S Uncharacterised protein family (UPF0014)
AFPILHDD_00833 1.4e-113 ybbL S ABC transporter, ATP-binding protein
AFPILHDD_00834 3.9e-30 WQ51_00220 K Helix-turn-helix XRE-family like proteins
AFPILHDD_00836 2e-33
AFPILHDD_00838 1.4e-122 yhiD S MgtC family
AFPILHDD_00839 5.7e-241 I Protein of unknown function (DUF2974)
AFPILHDD_00840 2.5e-25 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_00841 1.4e-69 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_00842 1e-81 yueI S Protein of unknown function (DUF1694)
AFPILHDD_00843 1.6e-241 rarA L recombination factor protein RarA
AFPILHDD_00844 2.5e-35
AFPILHDD_00845 3.1e-78 usp6 T universal stress protein
AFPILHDD_00846 4.3e-217 rodA D Belongs to the SEDS family
AFPILHDD_00847 8.6e-34 S Protein of unknown function (DUF2969)
AFPILHDD_00848 3.8e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
AFPILHDD_00849 6.5e-179 mbl D Cell shape determining protein MreB Mrl
AFPILHDD_00850 3.4e-30 ywzB S Protein of unknown function (DUF1146)
AFPILHDD_00851 7.7e-55 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
AFPILHDD_00852 2.4e-238 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AFPILHDD_00853 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AFPILHDD_00854 2.2e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AFPILHDD_00855 2.3e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AFPILHDD_00856 9.5e-49 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AFPILHDD_00857 8.6e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AFPILHDD_00858 7.6e-129 atpB C it plays a direct role in the translocation of protons across the membrane
AFPILHDD_00859 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AFPILHDD_00860 1.1e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
AFPILHDD_00861 6e-157 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
AFPILHDD_00862 5.3e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AFPILHDD_00863 7.6e-114 tdk 2.7.1.21 F thymidine kinase
AFPILHDD_00864 3.1e-248 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
AFPILHDD_00867 4.6e-196 ampC V Beta-lactamase
AFPILHDD_00869 6.2e-67 msmR7 K helix_turn_helix, arabinose operon control protein
AFPILHDD_00870 4e-33 scrB 3.2.1.26 GH32 G invertase
AFPILHDD_00871 1.8e-16 rafA 3.2.1.22 G alpha-galactosidase
AFPILHDD_00872 3.6e-188 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
AFPILHDD_00873 5.3e-134 manY G PTS system
AFPILHDD_00874 1.2e-174 manN G system, mannose fructose sorbose family IID component
AFPILHDD_00875 7.6e-64 manO S Domain of unknown function (DUF956)
AFPILHDD_00876 3.1e-150 K Transcriptional regulator
AFPILHDD_00877 4e-10 maa S transferase hexapeptide repeat
AFPILHDD_00878 3.7e-61 maa S transferase hexapeptide repeat
AFPILHDD_00879 5.8e-242 cycA E Amino acid permease
AFPILHDD_00880 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
AFPILHDD_00881 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
AFPILHDD_00882 8.8e-47
AFPILHDD_00883 2.2e-45 yagE E amino acid
AFPILHDD_00884 2.8e-49
AFPILHDD_00885 9.6e-89 UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_00886 4.7e-35 S LPXTG cell wall anchor motif
AFPILHDD_00887 1.4e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AFPILHDD_00888 1.3e-136 4.1.1.44 S Carboxymuconolactone decarboxylase family
AFPILHDD_00889 6.4e-37
AFPILHDD_00890 7.7e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
AFPILHDD_00891 1.6e-94 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
AFPILHDD_00892 8.6e-105 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
AFPILHDD_00893 1.8e-28 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
AFPILHDD_00894 1.5e-17 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AFPILHDD_00896 5.4e-198 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AFPILHDD_00897 4.7e-24 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
AFPILHDD_00898 3.6e-67 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
AFPILHDD_00899 6.2e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
AFPILHDD_00900 3.4e-86 S ECF transporter, substrate-specific component
AFPILHDD_00901 1.6e-142 fat 3.1.2.21 I Acyl-ACP thioesterase
AFPILHDD_00902 7.9e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AFPILHDD_00903 2.4e-59 yabA L Involved in initiation control of chromosome replication
AFPILHDD_00904 1.5e-155 holB 2.7.7.7 L DNA polymerase III
AFPILHDD_00905 2.2e-51 yaaQ S Cyclic-di-AMP receptor
AFPILHDD_00906 8.7e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AFPILHDD_00907 6.4e-35 S Protein of unknown function (DUF2508)
AFPILHDD_00908 4.8e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AFPILHDD_00909 5e-38 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AFPILHDD_00910 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AFPILHDD_00911 6.9e-92 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
AFPILHDD_00912 1e-116 rsmC 2.1.1.172 J Methyltransferase
AFPILHDD_00913 1.1e-80 rsmC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
AFPILHDD_00914 2.4e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
AFPILHDD_00915 5.4e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AFPILHDD_00916 1.8e-157 yfdV S Membrane transport protein
AFPILHDD_00917 4.3e-27 yfdV S Membrane transport protein
AFPILHDD_00918 7.5e-118 phoU P Plays a role in the regulation of phosphate uptake
AFPILHDD_00919 7.8e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AFPILHDD_00920 1.1e-144 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AFPILHDD_00921 7e-156 pstA P Phosphate transport system permease protein PstA
AFPILHDD_00922 3.7e-174 pstC P probably responsible for the translocation of the substrate across the membrane
AFPILHDD_00923 4.3e-158 pstS P Phosphate
AFPILHDD_00924 6.6e-43 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_00925 3.7e-39
AFPILHDD_00926 2.5e-18 C nitroreductase
AFPILHDD_00927 1.4e-47 C nitroreductase
AFPILHDD_00928 1.1e-240 yhdP S Transporter associated domain
AFPILHDD_00929 2.2e-102 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
AFPILHDD_00930 5.4e-156 potE E amino acid
AFPILHDD_00931 4.3e-37 potE E amino acid
AFPILHDD_00932 8.9e-130 M Glycosyl hydrolases family 25
AFPILHDD_00933 1.1e-207 yfmL 3.6.4.13 L DEAD DEAH box helicase
AFPILHDD_00934 6.4e-246 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AFPILHDD_00936 1.2e-25
AFPILHDD_00937 3.8e-215 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
AFPILHDD_00938 3.1e-90 gtcA S Teichoic acid glycosylation protein
AFPILHDD_00939 1.6e-79 fld C Flavodoxin
AFPILHDD_00940 8.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
AFPILHDD_00941 1.4e-151 yihY S Belongs to the UPF0761 family
AFPILHDD_00942 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
AFPILHDD_00943 9.6e-27 L transposase, IS605 OrfB family
AFPILHDD_00944 2.4e-126 L transposase, IS605 OrfB family
AFPILHDD_00945 1.2e-216 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
AFPILHDD_00946 6.1e-219 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
AFPILHDD_00947 1.6e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
AFPILHDD_00948 6.5e-47
AFPILHDD_00949 1.4e-24 L An automated process has identified a potential problem with this gene model
AFPILHDD_00950 1.9e-40 L An automated process has identified a potential problem with this gene model
AFPILHDD_00951 8.6e-153 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_00952 1.8e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AFPILHDD_00953 2.7e-281 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AFPILHDD_00954 1.2e-27 iscS2 2.8.1.7 E Aminotransferase class V
AFPILHDD_00955 1.2e-154 iscS2 2.8.1.7 E Aminotransferase class V
AFPILHDD_00956 1.7e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AFPILHDD_00957 1e-33 K Helix-turn-helix domain
AFPILHDD_00958 2.9e-82 K Helix-turn-helix domain
AFPILHDD_00959 4.9e-128 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
AFPILHDD_00960 2e-14 K Helix-turn-helix XRE-family like proteins
AFPILHDD_00961 1.1e-65
AFPILHDD_00962 3.8e-20
AFPILHDD_00963 1.1e-89
AFPILHDD_00964 9.9e-132 K Helix-turn-helix XRE-family like proteins
AFPILHDD_00965 2.6e-271 S SLAP domain
AFPILHDD_00966 2.2e-71 S Protein of unknown function (DUF3232)
AFPILHDD_00968 1.9e-83
AFPILHDD_00969 1.6e-22
AFPILHDD_00970 2.2e-46 K Helix-turn-helix XRE-family like proteins
AFPILHDD_00971 1.4e-75 K Helix-turn-helix XRE-family like proteins
AFPILHDD_00972 2.2e-117 KLT serine threonine protein kinase
AFPILHDD_00973 1.5e-07 V ABC transporter transmembrane region
AFPILHDD_00974 4e-265 V ABC transporter transmembrane region
AFPILHDD_00975 1.1e-27
AFPILHDD_00976 6.3e-91 bioY S BioY family
AFPILHDD_00977 1.8e-189 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
AFPILHDD_00978 4.4e-135 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
AFPILHDD_00979 4.1e-144 accA 2.1.3.15, 6.4.1.2 I alpha subunit
AFPILHDD_00980 2.7e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AFPILHDD_00981 2.5e-261 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
AFPILHDD_00982 2.7e-73 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
AFPILHDD_00983 2.1e-79 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
AFPILHDD_00984 1.6e-230 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
AFPILHDD_00985 1.7e-128 IQ reductase
AFPILHDD_00986 1.5e-169 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
AFPILHDD_00987 1.4e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
AFPILHDD_00988 4.5e-180 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AFPILHDD_00989 8.1e-79 marR K Transcriptional regulator
AFPILHDD_00990 3.8e-78 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
AFPILHDD_00991 1e-188 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
AFPILHDD_00992 1.8e-13 ytgB S Transglycosylase associated protein
AFPILHDD_00993 1.9e-80 L Resolvase, N terminal domain
AFPILHDD_00994 5.1e-129 L Transposase
AFPILHDD_00995 5.1e-63 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_00996 5.7e-158 glcU U sugar transport
AFPILHDD_00997 6.2e-73 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_00998 1.9e-200 xerS L Belongs to the 'phage' integrase family
AFPILHDD_00999 1.8e-67
AFPILHDD_01000 3.9e-78 adk 2.7.4.3 F topology modulation protein
AFPILHDD_01001 3.4e-109 XK27_00160 S Domain of unknown function (DUF5052)
AFPILHDD_01002 1.4e-54
AFPILHDD_01003 8.2e-28 M Glycosyl hydrolases family 25
AFPILHDD_01004 2.5e-44 M Glycosyl hydrolases family 25
AFPILHDD_01005 1.1e-47 M Glycosyl hydrolases family 25
AFPILHDD_01006 3.6e-13 lysA2 M Glycosyl hydrolases family 25
AFPILHDD_01007 5.4e-34 S Transglycosylase associated protein
AFPILHDD_01008 6e-106 yoaK S Protein of unknown function (DUF1275)
AFPILHDD_01009 2.1e-55 K Helix-turn-helix domain
AFPILHDD_01010 3.7e-72 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AFPILHDD_01011 2.7e-19 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AFPILHDD_01012 1.1e-164 ppaC 3.6.1.1 C inorganic pyrophosphatase
AFPILHDD_01013 2.4e-170 K Transcriptional regulator
AFPILHDD_01014 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AFPILHDD_01015 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AFPILHDD_01016 1.3e-105 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AFPILHDD_01017 3.3e-81 snf 2.7.11.1 KL domain protein
AFPILHDD_01018 1.6e-140
AFPILHDD_01019 1.4e-219 S SLAP domain
AFPILHDD_01020 3.5e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AFPILHDD_01021 4.2e-55 2.7.1.2 GK ROK family
AFPILHDD_01022 2.8e-68 GK ROK family
AFPILHDD_01023 5.5e-43
AFPILHDD_01024 1.2e-268 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
AFPILHDD_01025 5.5e-68 S Domain of unknown function (DUF1934)
AFPILHDD_01026 1e-59 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
AFPILHDD_01027 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
AFPILHDD_01028 3.6e-246 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AFPILHDD_01029 3.2e-33 S Haloacid dehalogenase-like hydrolase
AFPILHDD_01030 1.8e-47 S Haloacid dehalogenase-like hydrolase
AFPILHDD_01031 4.1e-283 pipD E Dipeptidase
AFPILHDD_01032 1.1e-158 msmR K AraC-like ligand binding domain
AFPILHDD_01033 1.9e-223 pbuX F xanthine permease
AFPILHDD_01034 7.4e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
AFPILHDD_01035 1.6e-106 K DNA-binding helix-turn-helix protein
AFPILHDD_01036 4e-242 purD 6.3.4.13 F Belongs to the GARS family
AFPILHDD_01037 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
AFPILHDD_01038 4.9e-201 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
AFPILHDD_01039 2.4e-275 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AFPILHDD_01040 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AFPILHDD_01041 8.8e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AFPILHDD_01042 1.3e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AFPILHDD_01043 1.1e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
AFPILHDD_01044 3.9e-220 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AFPILHDD_01045 1.3e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AFPILHDD_01046 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
AFPILHDD_01047 3.6e-137 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
AFPILHDD_01048 1.4e-193 ydiM G Major Facilitator Superfamily
AFPILHDD_01049 1.5e-21 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AFPILHDD_01050 1.2e-115 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AFPILHDD_01052 2.6e-79 S Uncharacterised protein family (UPF0236)
AFPILHDD_01053 8.1e-262
AFPILHDD_01054 5.7e-123 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AFPILHDD_01055 4.7e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
AFPILHDD_01056 1e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
AFPILHDD_01057 1.4e-215 ecsB U ABC transporter
AFPILHDD_01058 3.9e-136 ecsA V ABC transporter, ATP-binding protein
AFPILHDD_01059 3.8e-54 higA K Helix-turn-helix XRE-family like proteins
AFPILHDD_01060 3.3e-34 S Plasmid maintenance system killer
AFPILHDD_01061 8.9e-80 hit FG Scavenger mRNA decapping enzyme C-term binding
AFPILHDD_01062 8e-28
AFPILHDD_01063 1e-154 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
AFPILHDD_01064 6.2e-78 S PAS domain
AFPILHDD_01065 3.2e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
AFPILHDD_01066 0.0 L AAA domain
AFPILHDD_01067 1.2e-230 yhaO L Ser Thr phosphatase family protein
AFPILHDD_01068 9.4e-56 yheA S Belongs to the UPF0342 family
AFPILHDD_01069 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
AFPILHDD_01070 1.3e-162 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AFPILHDD_01071 1.8e-95 L An automated process has identified a potential problem with this gene model
AFPILHDD_01072 1.4e-203 malK P ATPases associated with a variety of cellular activities
AFPILHDD_01073 1.9e-158 gtsB P ABC-type sugar transport systems, permease components
AFPILHDD_01074 1.6e-146 gtsC P Binding-protein-dependent transport system inner membrane component
AFPILHDD_01075 2.3e-256 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
AFPILHDD_01076 6.3e-238 G Bacterial extracellular solute-binding protein
AFPILHDD_01077 2.8e-160 corA P CorA-like Mg2+ transporter protein
AFPILHDD_01078 2.1e-158 3.5.2.6 V Beta-lactamase enzyme family
AFPILHDD_01079 9.5e-98 yobS K Bacterial regulatory proteins, tetR family
AFPILHDD_01080 0.0 ydgH S MMPL family
AFPILHDD_01081 1.4e-155
AFPILHDD_01082 1.2e-263 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
AFPILHDD_01083 1.3e-126 hipB K Helix-turn-helix
AFPILHDD_01084 1.9e-152 I alpha/beta hydrolase fold
AFPILHDD_01085 1e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
AFPILHDD_01086 5.2e-161 yeaE S Aldo/keto reductase family
AFPILHDD_01087 2.9e-88 S ECF transporter, substrate-specific component
AFPILHDD_01088 0.0 macB_3 V ABC transporter, ATP-binding protein
AFPILHDD_01089 4.7e-45 macB_3 V ABC transporter, ATP-binding protein
AFPILHDD_01090 1.2e-12 macB_3 V ABC transporter, ATP-binding protein
AFPILHDD_01091 2.9e-196 S DUF218 domain
AFPILHDD_01092 1.3e-119 S CAAX protease self-immunity
AFPILHDD_01093 6.4e-47
AFPILHDD_01094 3.7e-60 mutR K Helix-turn-helix XRE-family like proteins
AFPILHDD_01095 4.4e-43 mutR K Helix-turn-helix XRE-family like proteins
AFPILHDD_01096 2.5e-33 mutR K Helix-turn-helix XRE-family like proteins
AFPILHDD_01097 4e-81 S Putative adhesin
AFPILHDD_01098 9.1e-284 V ABC transporter transmembrane region
AFPILHDD_01099 2.4e-08 S YoeB-like toxin of bacterial type II toxin-antitoxin system
AFPILHDD_01100 1.5e-49 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
AFPILHDD_01101 4.8e-205 napA P Sodium/hydrogen exchanger family
AFPILHDD_01102 0.0 cadA P P-type ATPase
AFPILHDD_01103 7.8e-28 L An automated process has identified a potential problem with this gene model
AFPILHDD_01104 1e-44
AFPILHDD_01105 1.9e-40
AFPILHDD_01106 7.8e-188 ansA 3.5.1.1 EJ L-asparaginase, type I
AFPILHDD_01107 6.7e-16
AFPILHDD_01108 2.3e-19
AFPILHDD_01109 3.6e-98 3.6.3.8 P P-type ATPase
AFPILHDD_01110 3.3e-24 3.6.3.8 P P-type ATPase
AFPILHDD_01111 5e-82 3.6.3.8 P P-type ATPase
AFPILHDD_01112 3.6e-93
AFPILHDD_01113 4e-09
AFPILHDD_01114 1.9e-239 S response to antibiotic
AFPILHDD_01115 5.5e-126 pgm3 G Phosphoglycerate mutase family
AFPILHDD_01116 1.2e-70 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
AFPILHDD_01117 1e-45 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
AFPILHDD_01118 0.0 helD 3.6.4.12 L DNA helicase
AFPILHDD_01119 4.7e-109 glnP P ABC transporter permease
AFPILHDD_01120 4.5e-109 glnQ 3.6.3.21 E ABC transporter
AFPILHDD_01121 4.8e-132 aatB ET ABC transporter substrate-binding protein
AFPILHDD_01122 2.2e-78 yjcF S Acetyltransferase (GNAT) domain
AFPILHDD_01123 1.3e-104 E GDSL-like Lipase/Acylhydrolase
AFPILHDD_01124 2.1e-171 coaA 2.7.1.33 F Pantothenic acid kinase
AFPILHDD_01125 8.5e-211 mdtG EGP Major facilitator Superfamily
AFPILHDD_01126 1.5e-172
AFPILHDD_01127 5.5e-59 lysM M LysM domain
AFPILHDD_01128 0.0 pepN 3.4.11.2 E aminopeptidase
AFPILHDD_01129 4.8e-133 dtpT U amino acid peptide transporter
AFPILHDD_01130 2.8e-27 L transposase, IS605 OrfB family
AFPILHDD_01131 6.6e-92 2.7.7.12 C Domain of unknown function (DUF4931)
AFPILHDD_01132 2.4e-121
AFPILHDD_01133 6.9e-144 S Belongs to the UPF0246 family
AFPILHDD_01134 1.5e-143 aroD S Alpha/beta hydrolase family
AFPILHDD_01135 9.3e-112 G phosphoglycerate mutase
AFPILHDD_01136 4.1e-95 ygfC K Bacterial regulatory proteins, tetR family
AFPILHDD_01137 3e-45 hrtB V ABC transporter permease
AFPILHDD_01138 1.4e-103 hrtB V ABC transporter permease
AFPILHDD_01139 8.8e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
AFPILHDD_01140 6.3e-276 pipD E Dipeptidase
AFPILHDD_01141 2.8e-38
AFPILHDD_01142 5.7e-112 K WHG domain
AFPILHDD_01143 5.4e-178 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_01144 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
AFPILHDD_01145 2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AFPILHDD_01146 6.9e-101 nusG K Participates in transcription elongation, termination and antitermination
AFPILHDD_01147 5.9e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
AFPILHDD_01148 2.4e-98 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AFPILHDD_01149 7.5e-112 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AFPILHDD_01150 4.1e-87 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AFPILHDD_01151 1.1e-283 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
AFPILHDD_01152 2.2e-34
AFPILHDD_01153 1.4e-93 sigH K Belongs to the sigma-70 factor family
AFPILHDD_01154 7.8e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AFPILHDD_01155 2.3e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AFPILHDD_01156 2.9e-276 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
AFPILHDD_01157 1.1e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AFPILHDD_01158 3.3e-217 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AFPILHDD_01159 3.6e-15 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AFPILHDD_01160 5.6e-103 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
AFPILHDD_01161 4.5e-54
AFPILHDD_01162 1.1e-59 S SLAP domain
AFPILHDD_01163 2.5e-109 S SLAP domain
AFPILHDD_01164 4.7e-165 yvgN C Aldo keto reductase
AFPILHDD_01165 2.8e-68 tetP J elongation factor G
AFPILHDD_01166 4.4e-288 tetP J elongation factor G
AFPILHDD_01167 1.9e-92 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
AFPILHDD_01168 5.7e-49 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
AFPILHDD_01169 6.9e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AFPILHDD_01170 1.1e-79 yniA G Phosphotransferase enzyme family
AFPILHDD_01171 9.2e-79 yniA G Phosphotransferase enzyme family
AFPILHDD_01172 3.3e-160 xth 3.1.11.2 L exodeoxyribonuclease III
AFPILHDD_01173 1.6e-44 E amino acid
AFPILHDD_01174 2.9e-88 E amino acid
AFPILHDD_01175 0.0 L Helicase C-terminal domain protein
AFPILHDD_01176 4.2e-197 pbpX1 V Beta-lactamase
AFPILHDD_01177 7.9e-70 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
AFPILHDD_01178 0.0 aha1 P E1-E2 ATPase
AFPILHDD_01179 2.8e-162 metQ1 P Belongs to the nlpA lipoprotein family
AFPILHDD_01180 6.8e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AFPILHDD_01181 6.4e-88 metI P ABC transporter permease
AFPILHDD_01182 1.3e-76 S cog cog1373
AFPILHDD_01183 6.3e-62 S cog cog1373
AFPILHDD_01184 1.7e-34
AFPILHDD_01185 4.5e-266 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
AFPILHDD_01186 1e-262 frdC 1.3.5.4 C FAD binding domain
AFPILHDD_01188 1.5e-57 M domain protein
AFPILHDD_01189 6.3e-08 M domain protein
AFPILHDD_01190 6.2e-13 M domain protein
AFPILHDD_01191 4.1e-71 S YSIRK type signal peptide
AFPILHDD_01192 3.7e-45 S YSIRK type signal peptide
AFPILHDD_01193 3.9e-15 UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_01194 8.5e-42 UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_01196 3.6e-82 M NlpC/P60 family
AFPILHDD_01197 4.4e-138 EG EamA-like transporter family
AFPILHDD_01198 4.6e-109
AFPILHDD_01199 1.3e-79
AFPILHDD_01200 4.6e-177 XK27_05540 S DUF218 domain
AFPILHDD_01201 2.7e-71 yheS_2 S ATPases associated with a variety of cellular activities
AFPILHDD_01202 2.2e-74 yheS_2 S ATPases associated with a variety of cellular activities
AFPILHDD_01203 2.8e-87
AFPILHDD_01204 1.8e-57
AFPILHDD_01205 8.1e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AFPILHDD_01206 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AFPILHDD_01207 6.6e-184 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AFPILHDD_01210 4.8e-204 4.2.1.126 S Bacterial protein of unknown function (DUF871)
AFPILHDD_01211 4.3e-194 asnA 6.3.1.1 F aspartate--ammonia ligase
AFPILHDD_01212 1.2e-94 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
AFPILHDD_01213 2.4e-36 L An automated process has identified a potential problem with this gene model
AFPILHDD_01214 2e-26 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_01215 1.7e-168 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
AFPILHDD_01216 1.2e-255 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
AFPILHDD_01217 4.3e-69 rplI J Binds to the 23S rRNA
AFPILHDD_01218 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
AFPILHDD_01219 9.8e-64 S SLAP domain
AFPILHDD_01220 2.5e-67 L COG2826 Transposase and inactivated derivatives, IS30 family
AFPILHDD_01221 5.4e-69 K DNA-binding transcription factor activity
AFPILHDD_01222 0.0 O Belongs to the peptidase S8 family
AFPILHDD_01223 5.9e-310 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
AFPILHDD_01224 1.3e-148 yfjM S Protein of unknown function DUF262
AFPILHDD_01225 5.9e-305 XK27_11280 S Psort location CytoplasmicMembrane, score
AFPILHDD_01226 3e-47 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AFPILHDD_01227 8.7e-122 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AFPILHDD_01228 0.0 pepO 3.4.24.71 O Peptidase family M13
AFPILHDD_01229 2.7e-61 pdxH S Pyridoxamine 5'-phosphate oxidase
AFPILHDD_01230 2.5e-234 steT E amino acid
AFPILHDD_01231 1.4e-231 amd 3.5.1.47 E Peptidase family M20/M25/M40
AFPILHDD_01232 5.6e-49 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
AFPILHDD_01233 1.6e-25 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
AFPILHDD_01234 4.2e-36 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
AFPILHDD_01235 1.8e-30 mmuP E amino acid
AFPILHDD_01236 9.3e-130 mmuP E amino acid
AFPILHDD_01237 2.1e-34 mmuP E amino acid
AFPILHDD_01238 4.3e-244 N Uncharacterized conserved protein (DUF2075)
AFPILHDD_01239 3.3e-10 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
AFPILHDD_01240 4.4e-45 L transposase, IS605 OrfB family
AFPILHDD_01241 4.1e-270 yclK 2.7.13.3 T Histidine kinase
AFPILHDD_01242 8.3e-131 K Transcriptional regulatory protein, C terminal
AFPILHDD_01243 8.3e-61 S SdpI/YhfL protein family
AFPILHDD_01244 1.7e-168 manA 5.3.1.8 G mannose-6-phosphate isomerase
AFPILHDD_01245 5e-72 patB 4.4.1.8 E Aminotransferase, class I
AFPILHDD_01246 1.1e-129 patB 4.4.1.8 E Aminotransferase, class I
AFPILHDD_01247 1.1e-31 M Protein of unknown function (DUF3737)
AFPILHDD_01248 7.9e-34 M Protein of unknown function (DUF3737)
AFPILHDD_01250 2.1e-224 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AFPILHDD_01251 1e-187 ytxK 2.1.1.72 L N-6 DNA Methylase
AFPILHDD_01252 8.9e-84 comGF U Putative Competence protein ComGF
AFPILHDD_01253 1e-41
AFPILHDD_01254 2.1e-73
AFPILHDD_01255 3.7e-44 comGC U competence protein ComGC
AFPILHDD_01256 4.1e-19 comGB NU type II secretion system
AFPILHDD_01257 2.4e-143 comGB NU type II secretion system
AFPILHDD_01258 8.4e-179 comGA NU Type II IV secretion system protein
AFPILHDD_01259 8.9e-133 yebC K Transcriptional regulatory protein
AFPILHDD_01260 4.6e-91 S VanZ like family
AFPILHDD_01261 1.5e-15 NU Mycoplasma protein of unknown function, DUF285
AFPILHDD_01262 4.8e-81 S Domain of unknown function (DUF4430)
AFPILHDD_01263 9.3e-184 U FFAT motif binding
AFPILHDD_01264 7.8e-67 S Domain of unknown function (DUF4430)
AFPILHDD_01265 3.8e-257 S Uncharacterised protein family (UPF0236)
AFPILHDD_01266 1.6e-162 2.7.7.12 C Domain of unknown function (DUF4931)
AFPILHDD_01267 2.8e-82 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AFPILHDD_01268 9.7e-65 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AFPILHDD_01269 2e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AFPILHDD_01270 0.0 kup P Transport of potassium into the cell
AFPILHDD_01271 4.8e-176 rihB 3.2.2.1 F Nucleoside
AFPILHDD_01272 7.6e-21 gntR K UbiC transcription regulator-associated domain protein
AFPILHDD_01273 1.5e-74 gntR K UbiC transcription regulator-associated domain protein
AFPILHDD_01275 1.2e-19 L transposase, IS605 OrfB family
AFPILHDD_01276 1.5e-85 S Uncharacterised protein family (UPF0236)
AFPILHDD_01277 6.1e-219 naiP EGP Major facilitator Superfamily
AFPILHDD_01278 3.1e-275 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
AFPILHDD_01279 1.2e-67 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
AFPILHDD_01280 1.8e-76 oppA E ABC transporter
AFPILHDD_01281 3.5e-47 oppA E ABC transporter
AFPILHDD_01282 3.5e-43 oppA E ABC transporter
AFPILHDD_01283 4.3e-63 oppA E ABC transporter
AFPILHDD_01284 3.5e-36 Q Imidazolonepropionase and related amidohydrolases
AFPILHDD_01285 1.7e-48 Q Imidazolonepropionase and related amidohydrolases
AFPILHDD_01286 8.3e-73 Q Imidazolonepropionase and related amidohydrolases
AFPILHDD_01287 1.1e-17 psiE S Phosphate-starvation-inducible E
AFPILHDD_01289 6.7e-223 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AFPILHDD_01290 5.1e-289 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
AFPILHDD_01291 1.6e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
AFPILHDD_01292 9.2e-78 S SLAP domain
AFPILHDD_01293 4.5e-114 S SLAP domain
AFPILHDD_01294 1.6e-63 K Helix-turn-helix XRE-family like proteins
AFPILHDD_01300 1.3e-221 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
AFPILHDD_01302 2.3e-104
AFPILHDD_01303 4.5e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
AFPILHDD_01304 2.4e-40 K prlF antitoxin for toxin YhaV_toxin
AFPILHDD_01305 2e-106 L Integrase
AFPILHDD_01306 4.4e-20
AFPILHDD_01308 1.6e-91
AFPILHDD_01309 6.4e-26
AFPILHDD_01310 1.4e-49
AFPILHDD_01311 1.2e-103 2.7.1.199, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AFPILHDD_01312 1.4e-15 scrR K Transcriptional regulator, LacI family
AFPILHDD_01313 1.1e-93 scrR K Transcriptional regulator, LacI family
AFPILHDD_01314 6.5e-123 liaI S membrane
AFPILHDD_01315 7.9e-79 XK27_02470 K LytTr DNA-binding domain
AFPILHDD_01316 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AFPILHDD_01317 0.0 uup S ABC transporter, ATP-binding protein
AFPILHDD_01318 1.1e-12 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
AFPILHDD_01319 5.7e-215 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
AFPILHDD_01320 1.1e-37 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
AFPILHDD_01321 1.1e-26 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AFPILHDD_01322 1.1e-74 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AFPILHDD_01323 1.9e-80 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AFPILHDD_01324 6.5e-234 yfdE 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AFPILHDD_01325 1.7e-19 S Toxin ToxN, type III toxin-antitoxin system
AFPILHDD_01326 1.7e-21
AFPILHDD_01327 3e-65 arsC 1.20.4.1 P Belongs to the ArsC family
AFPILHDD_01328 4.5e-179 I Carboxylesterase family
AFPILHDD_01330 6.5e-213 M Glycosyl hydrolases family 25
AFPILHDD_01331 0.0 S Predicted membrane protein (DUF2207)
AFPILHDD_01332 2.1e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
AFPILHDD_01333 2.5e-129 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
AFPILHDD_01334 5.3e-200 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
AFPILHDD_01335 5.9e-105 S Uncharacterized protein conserved in bacteria (DUF2325)
AFPILHDD_01336 1.5e-123 S Uncharacterized protein conserved in bacteria (DUF2325)
AFPILHDD_01337 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
AFPILHDD_01338 2.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
AFPILHDD_01339 4e-201 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
AFPILHDD_01340 8.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AFPILHDD_01341 1.6e-70 yqhY S Asp23 family, cell envelope-related function
AFPILHDD_01342 8.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AFPILHDD_01343 2.9e-75 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_01344 5.9e-79 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_01345 2.7e-176 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
AFPILHDD_01346 1.4e-92 P Cobalt transport protein
AFPILHDD_01347 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
AFPILHDD_01348 1.1e-172 K helix_turn_helix, arabinose operon control protein
AFPILHDD_01349 1.2e-58 L hmm pf00665
AFPILHDD_01350 5.6e-08 L hmm pf00665
AFPILHDD_01351 1.8e-19 L hmm pf00665
AFPILHDD_01352 1.8e-65 L Helix-turn-helix domain
AFPILHDD_01353 1.3e-162 htpX O Belongs to the peptidase M48B family
AFPILHDD_01354 2.3e-96 lemA S LemA family
AFPILHDD_01355 1.4e-193 ybiR P Citrate transporter
AFPILHDD_01356 5.9e-70 S Iron-sulphur cluster biosynthesis
AFPILHDD_01357 4.2e-19 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
AFPILHDD_01358 1.2e-17
AFPILHDD_01359 1e-151
AFPILHDD_01360 3.4e-146 sufC O FeS assembly ATPase SufC
AFPILHDD_01361 1.8e-229 sufD O FeS assembly protein SufD
AFPILHDD_01362 1.2e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AFPILHDD_01363 3.8e-81 nifU C SUF system FeS assembly protein, NifU family
AFPILHDD_01364 3.2e-272 sufB O assembly protein SufB
AFPILHDD_01365 2.5e-55 yitW S Iron-sulfur cluster assembly protein
AFPILHDD_01366 2.2e-41 S Enterocin A Immunity
AFPILHDD_01367 1.4e-128 glcR K DeoR C terminal sensor domain
AFPILHDD_01368 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
AFPILHDD_01369 1.1e-161 rssA S Phospholipase, patatin family
AFPILHDD_01370 1.7e-205 L COG3547 Transposase and inactivated derivatives
AFPILHDD_01371 6.6e-31 K Helix-turn-helix XRE-family like proteins
AFPILHDD_01372 1.5e-91 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AFPILHDD_01373 1.5e-180 htrA 3.4.21.107 O serine protease
AFPILHDD_01374 3.3e-149 vicX 3.1.26.11 S domain protein
AFPILHDD_01375 1.1e-101 yycI S YycH protein
AFPILHDD_01376 1.5e-37 yycI S YycH protein
AFPILHDD_01377 1.2e-244 yycH S YycH protein
AFPILHDD_01378 8.2e-308 vicK 2.7.13.3 T Histidine kinase
AFPILHDD_01379 1.1e-130 K response regulator
AFPILHDD_01381 2.4e-33
AFPILHDD_01383 6.7e-11 L Transposase
AFPILHDD_01384 2e-166 S SLAP domain
AFPILHDD_01385 1.2e-55
AFPILHDD_01386 2.4e-38 K Helix-turn-helix domain
AFPILHDD_01387 2.9e-57 S Phage derived protein Gp49-like (DUF891)
AFPILHDD_01388 8.7e-170 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
AFPILHDD_01389 1.4e-62 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AFPILHDD_01390 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AFPILHDD_01391 4e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AFPILHDD_01392 4.7e-63 yodB K Transcriptional regulator, HxlR family
AFPILHDD_01393 3e-139 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AFPILHDD_01394 5.9e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
AFPILHDD_01395 2e-156 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AFPILHDD_01396 2.7e-85 S Aminoacyl-tRNA editing domain
AFPILHDD_01397 3.2e-281 arlS 2.7.13.3 T Histidine kinase
AFPILHDD_01398 3.2e-127 K response regulator
AFPILHDD_01399 8.5e-40 L transposase, IS605 OrfB family
AFPILHDD_01402 1.2e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
AFPILHDD_01403 8.1e-80 L Transposase and inactivated derivatives, IS30 family
AFPILHDD_01404 5.6e-161 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
AFPILHDD_01405 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
AFPILHDD_01406 1.3e-41 L Helix-turn-helix domain
AFPILHDD_01407 2.4e-223 oxlT P Major Facilitator Superfamily
AFPILHDD_01409 1.5e-68 K Acetyltransferase (GNAT) domain
AFPILHDD_01410 1.2e-70 L Transposase and inactivated derivatives, IS30 family
AFPILHDD_01411 1.8e-32 M NlpC/P60 family
AFPILHDD_01412 1.3e-89 2.7.7.65 T phosphorelay sensor kinase activity
AFPILHDD_01413 8.8e-134 cbiQ P Cobalt transport protein
AFPILHDD_01414 7e-158 P ABC transporter
AFPILHDD_01415 1.2e-151 cbiO2 P ABC transporter
AFPILHDD_01416 4.1e-47 L Psort location Cytoplasmic, score
AFPILHDD_01417 6.7e-259 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
AFPILHDD_01418 2e-49 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_01419 3.2e-124 L transposase, IS605 OrfB family
AFPILHDD_01420 6.3e-56 UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_01421 6.8e-79 UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_01422 3.4e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AFPILHDD_01423 3.7e-74 fhaB M Rib/alpha-like repeat
AFPILHDD_01424 1.5e-12
AFPILHDD_01425 4.7e-20
AFPILHDD_01427 9.3e-29
AFPILHDD_01428 1.9e-258 pepC 3.4.22.40 E Peptidase C1-like family
AFPILHDD_01429 0.0 clpE O Belongs to the ClpA ClpB family
AFPILHDD_01430 3.9e-44 XK27_09445 S Domain of unknown function (DUF1827)
AFPILHDD_01431 3.2e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AFPILHDD_01432 1.2e-160 hlyX S Transporter associated domain
AFPILHDD_01433 1.3e-73
AFPILHDD_01434 7.1e-86
AFPILHDD_01435 2.7e-146 recX 2.4.1.337 GT4 S Regulatory protein RecX
AFPILHDD_01436 3.9e-262 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AFPILHDD_01437 1.1e-112 L COG3385 FOG Transposase and inactivated derivatives
AFPILHDD_01438 3.1e-83 L COG3385 FOG Transposase and inactivated derivatives
AFPILHDD_01439 5e-41 L COG3385 FOG Transposase and inactivated derivatives
AFPILHDD_01440 2.2e-212 lacZ 3.2.1.23 G -beta-galactosidase
AFPILHDD_01441 0.0 lacS G Transporter
AFPILHDD_01442 4e-57 lacS G Transporter
AFPILHDD_01443 5.9e-70 lacS G Transporter
AFPILHDD_01444 6.8e-48 lacS G Transporter
AFPILHDD_01445 4.3e-24 lacS G Transporter
AFPILHDD_01446 4.9e-190 lacR K Transcriptional regulator
AFPILHDD_01447 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
AFPILHDD_01448 9.7e-188 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
AFPILHDD_01449 4.4e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
AFPILHDD_01461 4.8e-221 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
AFPILHDD_01462 4.4e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
AFPILHDD_01463 3.7e-177 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AFPILHDD_01464 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AFPILHDD_01465 2.3e-29 secG U Preprotein translocase
AFPILHDD_01466 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
AFPILHDD_01467 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
AFPILHDD_01468 2.3e-33 S RelB antitoxin
AFPILHDD_01469 1e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AFPILHDD_01470 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
AFPILHDD_01471 1.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
AFPILHDD_01472 4.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AFPILHDD_01473 3.2e-183 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
AFPILHDD_01474 3.2e-247 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
AFPILHDD_01475 1.4e-74 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
AFPILHDD_01476 2e-120 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
AFPILHDD_01477 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
AFPILHDD_01478 2.1e-34 pepA E M42 glutamyl aminopeptidase
AFPILHDD_01479 3.2e-135 pepA E M42 glutamyl aminopeptidase
AFPILHDD_01480 3.4e-310 ybiT S ABC transporter, ATP-binding protein
AFPILHDD_01481 6.2e-11
AFPILHDD_01482 2e-123
AFPILHDD_01483 4.2e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
AFPILHDD_01484 9.9e-149 glnH ET ABC transporter
AFPILHDD_01485 5.7e-80 K Transcriptional regulator, MarR family
AFPILHDD_01486 9.8e-287 XK27_09600 V ABC transporter, ATP-binding protein
AFPILHDD_01487 0.0 V ABC transporter transmembrane region
AFPILHDD_01488 7.6e-103 S ABC-type cobalt transport system, permease component
AFPILHDD_01489 3.5e-106 K LysR substrate binding domain
AFPILHDD_01490 1.1e-19
AFPILHDD_01491 2.5e-214 S Sterol carrier protein domain
AFPILHDD_01492 8.9e-98 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
AFPILHDD_01493 2.8e-52 arcC 2.7.2.2 E Belongs to the carbamate kinase family
AFPILHDD_01494 2.4e-37 arcC 2.7.2.2 E Belongs to the carbamate kinase family
AFPILHDD_01495 7.2e-13 arcC 2.7.2.2 E Belongs to the carbamate kinase family
AFPILHDD_01496 6.8e-110 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AFPILHDD_01497 3.9e-13 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AFPILHDD_01498 4.9e-44 arcA 3.5.3.6 E Arginine
AFPILHDD_01499 9e-58 arcA 3.5.3.6 E Arginine
AFPILHDD_01500 3.2e-26 arcA 3.5.3.6 E Arginine
AFPILHDD_01501 8.8e-156 lysR5 K LysR substrate binding domain
AFPILHDD_01502 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
AFPILHDD_01503 1.6e-85 3.4.21.96 S SLAP domain
AFPILHDD_01504 9.7e-97 L An automated process has identified a potential problem with this gene model
AFPILHDD_01505 2.7e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
AFPILHDD_01506 1.8e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AFPILHDD_01507 1.1e-245 G Bacterial extracellular solute-binding protein
AFPILHDD_01508 1.4e-66 S Peptidase propeptide and YPEB domain
AFPILHDD_01510 1.3e-95 F Nucleoside 2-deoxyribosyltransferase
AFPILHDD_01511 1.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AFPILHDD_01512 9.3e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
AFPILHDD_01513 1.1e-167 V ABC transporter transmembrane region
AFPILHDD_01514 7e-97 V ABC transporter transmembrane region
AFPILHDD_01515 1.2e-140 pnuC H nicotinamide mononucleotide transporter
AFPILHDD_01516 6.6e-11 S Protein of unknown function (DUF3290)
AFPILHDD_01517 1e-41 S Protein of unknown function (DUF3290)
AFPILHDD_01518 2.4e-36 L An automated process has identified a potential problem with this gene model
AFPILHDD_01519 3.3e-86 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AFPILHDD_01520 1.2e-174 prmA J Ribosomal protein L11 methyltransferase
AFPILHDD_01521 8.5e-60
AFPILHDD_01522 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AFPILHDD_01523 4.8e-73 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
AFPILHDD_01524 2.3e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
AFPILHDD_01525 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
AFPILHDD_01526 2.1e-224 patA 2.6.1.1 E Aminotransferase
AFPILHDD_01527 5.6e-10
AFPILHDD_01529 3.6e-35 S Uncharacterised protein family (UPF0236)
AFPILHDD_01530 4.3e-23
AFPILHDD_01531 3e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
AFPILHDD_01532 7e-220 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
AFPILHDD_01533 3.3e-95 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
AFPILHDD_01534 2.8e-17 IQ reductase
AFPILHDD_01535 7.3e-194 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AFPILHDD_01536 9.3e-74 nrdI F Probably involved in ribonucleotide reductase function
AFPILHDD_01537 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AFPILHDD_01538 1.7e-56 L Transposase
AFPILHDD_01539 1.8e-39
AFPILHDD_01540 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
AFPILHDD_01541 7.2e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
AFPILHDD_01542 5.7e-126 S Haloacid dehalogenase-like hydrolase
AFPILHDD_01543 2.1e-114 radC L DNA repair protein
AFPILHDD_01544 1.7e-174 mreB D cell shape determining protein MreB
AFPILHDD_01545 7.9e-149 mreC M Involved in formation and maintenance of cell shape
AFPILHDD_01546 4.5e-97 mreD
AFPILHDD_01547 6.5e-13 S Protein of unknown function (DUF4044)
AFPILHDD_01548 2.2e-54 S Protein of unknown function (DUF3397)
AFPILHDD_01549 9.4e-183 S Domain of unknown function (DUF389)
AFPILHDD_01550 2.7e-29 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
AFPILHDD_01551 6.1e-238 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
AFPILHDD_01552 3.3e-56 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AFPILHDD_01553 6.2e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
AFPILHDD_01554 5.1e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AFPILHDD_01555 1.3e-93 yqeG S HAD phosphatase, family IIIA
AFPILHDD_01556 1.3e-212 yqeH S Ribosome biogenesis GTPase YqeH
AFPILHDD_01557 6e-120 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AFPILHDD_01558 1.2e-108 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
AFPILHDD_01559 6.9e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
AFPILHDD_01560 3.9e-215 ylbM S Belongs to the UPF0348 family
AFPILHDD_01561 4.1e-98 yceD S Uncharacterized ACR, COG1399
AFPILHDD_01562 6.6e-107 S Uncharacterised protein family (UPF0236)
AFPILHDD_01563 2.4e-81 S Uncharacterised protein family (UPF0236)
AFPILHDD_01564 6e-219 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AFPILHDD_01565 2.4e-158 S reductase
AFPILHDD_01566 1.9e-84 yxeH S hydrolase
AFPILHDD_01567 9.6e-46 yxeH S hydrolase
AFPILHDD_01568 1.1e-14 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AFPILHDD_01569 9.9e-78 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AFPILHDD_01570 3.3e-43 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AFPILHDD_01571 9.9e-250 yfnA E Amino Acid
AFPILHDD_01572 3.5e-71 dedA 3.1.3.1 S SNARE associated Golgi protein
AFPILHDD_01573 2.3e-136 L Transposase
AFPILHDD_01574 7.9e-112 L DDE superfamily endonuclease
AFPILHDD_01575 5.7e-216 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
AFPILHDD_01576 6.4e-182 ccpA K catabolite control protein A
AFPILHDD_01577 2.6e-263 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
AFPILHDD_01578 1.1e-55
AFPILHDD_01579 1.1e-157 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
AFPILHDD_01580 6.3e-111 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
AFPILHDD_01581 1.8e-89 yutD S Protein of unknown function (DUF1027)
AFPILHDD_01582 4.4e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
AFPILHDD_01583 2.2e-84 S Protein of unknown function (DUF1461)
AFPILHDD_01584 1.8e-116 dedA S SNARE-like domain protein
AFPILHDD_01585 7.4e-152 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
AFPILHDD_01586 1.4e-13 S Uncharacterised protein family (UPF0236)
AFPILHDD_01587 8.3e-265 lysC 2.7.2.4 E Belongs to the aspartokinase family
AFPILHDD_01588 1.5e-191 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AFPILHDD_01589 5.9e-183 yjeM E Amino Acid
AFPILHDD_01590 1.6e-14 yjeM E Amino Acid
AFPILHDD_01591 7.5e-106 engB D Necessary for normal cell division and for the maintenance of normal septation
AFPILHDD_01592 4.9e-235 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AFPILHDD_01593 6.4e-214 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
AFPILHDD_01594 3.3e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AFPILHDD_01595 3.2e-172 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AFPILHDD_01596 1.7e-69 yqhL P Rhodanese-like protein
AFPILHDD_01597 5.6e-33 yqgQ S Bacterial protein of unknown function (DUF910)
AFPILHDD_01598 3.7e-117 gluP 3.4.21.105 S Rhomboid family
AFPILHDD_01599 1.7e-99 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AFPILHDD_01600 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
AFPILHDD_01601 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
AFPILHDD_01602 9.8e-169 S membrane
AFPILHDD_01603 5e-293 S membrane
AFPILHDD_01604 1e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
AFPILHDD_01605 4.3e-203 glf 5.4.99.9 M UDP-galactopyranose mutase
AFPILHDD_01606 1.1e-227 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
AFPILHDD_01607 1.5e-117 S Acyltransferase family
AFPILHDD_01609 4.9e-58 yufP S Belongs to the binding-protein-dependent transport system permease family
AFPILHDD_01610 1.6e-26 yufQ S Belongs to the binding-protein-dependent transport system permease family
AFPILHDD_01611 1.2e-112 yufQ S Belongs to the binding-protein-dependent transport system permease family
AFPILHDD_01612 0.0 3.6.3.8 P P-type ATPase
AFPILHDD_01613 1.5e-109 K Transcriptional regulator, LysR family
AFPILHDD_01614 1.3e-34 S Cytochrome b5
AFPILHDD_01615 1.7e-167 arbZ I Phosphate acyltransferases
AFPILHDD_01616 4.5e-151 arbY M Glycosyl transferase family 8
AFPILHDD_01617 3.7e-10 arbY M Glycosyl transferase family 8
AFPILHDD_01618 1.8e-186 arbY M Glycosyl transferase family 8
AFPILHDD_01619 2.3e-43 arbx M Glycosyl transferase family 8
AFPILHDD_01620 1.1e-104 arbx M Glycosyl transferase family 8
AFPILHDD_01621 4e-13 K Helix-turn-helix domain
AFPILHDD_01622 2.1e-120 K Helix-turn-helix domain
AFPILHDD_01623 1.9e-14
AFPILHDD_01624 4.5e-67
AFPILHDD_01625 7.8e-148 arbV 2.3.1.51 I Acyl-transferase
AFPILHDD_01626 2.3e-196 S SLAP domain
AFPILHDD_01627 3.9e-18
AFPILHDD_01628 1.8e-26 L Transposase
AFPILHDD_01629 1e-273 P Sodium:sulfate symporter transmembrane region
AFPILHDD_01630 4e-155 ydjP I Alpha/beta hydrolase family
AFPILHDD_01631 3.3e-197 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AFPILHDD_01632 9.1e-44 citD C Covalent carrier of the coenzyme of citrate lyase
AFPILHDD_01633 4.1e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
AFPILHDD_01634 2.4e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
AFPILHDD_01635 6.9e-150
AFPILHDD_01636 1.7e-201 L Transposase
AFPILHDD_01637 6.3e-56 S Psort location Cytoplasmic, score
AFPILHDD_01638 2.8e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
AFPILHDD_01639 2.3e-176 S SLAP domain
AFPILHDD_01640 4.3e-291 M Peptidase family M1 domain
AFPILHDD_01641 2.4e-194 S Bacteriocin helveticin-J
AFPILHDD_01642 3.1e-14
AFPILHDD_01643 1.3e-51 L RelB antitoxin
AFPILHDD_01644 1e-35 qmcA O prohibitin homologues
AFPILHDD_01645 7.3e-100 qmcA O prohibitin homologues
AFPILHDD_01646 2e-67 darA C Flavodoxin
AFPILHDD_01647 2.4e-16 darA C Flavodoxin
AFPILHDD_01648 5.5e-97 yxkA S Phosphatidylethanolamine-binding protein
AFPILHDD_01649 4e-248 yjjP S Putative threonine/serine exporter
AFPILHDD_01650 2.4e-178 citR K Putative sugar-binding domain
AFPILHDD_01651 1.6e-16
AFPILHDD_01652 6.4e-66 S Domain of unknown function DUF1828
AFPILHDD_01653 5.6e-95 S UPF0397 protein
AFPILHDD_01654 0.0 ykoD P ABC transporter, ATP-binding protein
AFPILHDD_01655 4e-145 cbiQ P cobalt transport
AFPILHDD_01656 2.7e-10
AFPILHDD_01657 2.7e-71 yeaL S Protein of unknown function (DUF441)
AFPILHDD_01658 2.9e-80 S Short repeat of unknown function (DUF308)
AFPILHDD_01659 4.8e-165 rapZ S Displays ATPase and GTPase activities
AFPILHDD_01660 2.6e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
AFPILHDD_01661 1.4e-170 whiA K May be required for sporulation
AFPILHDD_01662 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
AFPILHDD_01663 0.0 S SH3-like domain
AFPILHDD_01664 6.6e-153 S haloacid dehalogenase-like hydrolase
AFPILHDD_01665 4.4e-59 ycaM E amino acid
AFPILHDD_01666 3e-135 ycaM E amino acid
AFPILHDD_01667 1.4e-43 S Domain of unknown function (DUF4393)
AFPILHDD_01669 3.8e-34
AFPILHDD_01670 2.2e-276 E Amino acid permease
AFPILHDD_01671 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
AFPILHDD_01672 2.1e-165 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
AFPILHDD_01673 3.3e-97
AFPILHDD_01674 2.4e-23 G Major Facilitator Superfamily
AFPILHDD_01675 8.8e-18
AFPILHDD_01676 2.7e-21 XK27_01125 L IS66 Orf2 like protein
AFPILHDD_01677 2.5e-48 S SLAP domain
AFPILHDD_01678 4.4e-94 S SLAP domain
AFPILHDD_01680 0.0 oppA E ABC transporter substrate-binding protein
AFPILHDD_01681 2.1e-21
AFPILHDD_01682 1.3e-32
AFPILHDD_01683 1.7e-114 papP P ABC transporter, permease protein
AFPILHDD_01684 3e-99 P ABC transporter permease
AFPILHDD_01685 3.9e-136 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFPILHDD_01686 3.7e-162 cjaA ET ABC transporter substrate-binding protein
AFPILHDD_01687 8.6e-26 L metal-sulfur cluster biosynthetic enzyme
AFPILHDD_01688 5.3e-91 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
AFPILHDD_01689 1.7e-229 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
AFPILHDD_01690 9e-112 G Phosphoglycerate mutase family
AFPILHDD_01691 8.2e-196 D nuclear chromosome segregation
AFPILHDD_01692 5.6e-68 M LysM domain protein
AFPILHDD_01693 5.6e-13
AFPILHDD_01694 2.7e-21 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
AFPILHDD_01695 1.6e-48 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
AFPILHDD_01696 3.9e-29 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
AFPILHDD_01697 5.4e-68
AFPILHDD_01698 7.1e-32
AFPILHDD_01699 4.1e-71 S Iron-sulphur cluster biosynthesis
AFPILHDD_01700 1.7e-251 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
AFPILHDD_01701 3.6e-78 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
AFPILHDD_01702 4.7e-221 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
AFPILHDD_01703 1.9e-175 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AFPILHDD_01704 2.4e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
AFPILHDD_01705 7.1e-217 aspC 2.6.1.1 E Aminotransferase
AFPILHDD_01706 1.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AFPILHDD_01707 2.3e-96 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
AFPILHDD_01708 4.3e-184 P secondary active sulfate transmembrane transporter activity
AFPILHDD_01709 1.3e-108 L Transposase and inactivated derivatives, IS30 family
AFPILHDD_01710 2.4e-124 metF 1.5.1.20 C Methylenetetrahydrofolate reductase
AFPILHDD_01711 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AFPILHDD_01712 5.7e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
AFPILHDD_01713 3.8e-15
AFPILHDD_01714 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
AFPILHDD_01715 2.1e-120 srtA 3.4.22.70 M sortase family
AFPILHDD_01716 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
AFPILHDD_01717 3.7e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AFPILHDD_01718 8e-171 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
AFPILHDD_01719 3e-53 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
AFPILHDD_01720 5.9e-29 yitS S Uncharacterised protein, DegV family COG1307
AFPILHDD_01721 1.1e-92 yitS S Uncharacterised protein, DegV family COG1307
AFPILHDD_01722 4.7e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
AFPILHDD_01723 7.5e-69 S Domain of unknown function (DUF4767)
AFPILHDD_01724 1.2e-85 C nitroreductase
AFPILHDD_01725 7.7e-11 ypbG 2.7.1.2 GK ROK family
AFPILHDD_01726 7.7e-80 ypbG 2.7.1.2 GK ROK family
AFPILHDD_01727 5.1e-80 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AFPILHDD_01728 6.3e-173 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AFPILHDD_01729 1.1e-135 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AFPILHDD_01731 1.8e-287 V ABC transporter transmembrane region
AFPILHDD_01732 3.2e-118 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AFPILHDD_01736 2.5e-236 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_01737 2.5e-92 L the current gene model (or a revised gene model) may contain a
AFPILHDD_01738 2e-16 S KAP family P-loop domain
AFPILHDD_01742 3.4e-15
AFPILHDD_01746 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AFPILHDD_01747 8.3e-108 vanZ V VanZ like family
AFPILHDD_01748 6.4e-262 pgi 5.3.1.9 G Belongs to the GPI family
AFPILHDD_01749 7.7e-119 EGP Major facilitator Superfamily
AFPILHDD_01750 4.4e-14 EGP Major facilitator Superfamily
AFPILHDD_01751 4.2e-55 L Transposase
AFPILHDD_01752 1.1e-264 pepC 3.4.22.40 E Peptidase C1-like family
AFPILHDD_01753 4.8e-146 glcU U sugar transport
AFPILHDD_01755 3.5e-25
AFPILHDD_01756 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
AFPILHDD_01757 8.5e-40 L transposase, IS605 OrfB family
AFPILHDD_01758 1.5e-174 S Aldo keto reductase
AFPILHDD_01759 2e-177 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
AFPILHDD_01760 1e-82
AFPILHDD_01761 2.3e-17 C FMN_bind
AFPILHDD_01762 4.5e-302 I Protein of unknown function (DUF2974)
AFPILHDD_01763 3.2e-106 3.6.1.55 F NUDIX domain
AFPILHDD_01764 1.8e-206 pbpX1 V Beta-lactamase
AFPILHDD_01765 5.4e-141 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AFPILHDD_01766 2e-109 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AFPILHDD_01767 7.5e-108 pncA Q Isochorismatase family
AFPILHDD_01768 3.3e-101 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
AFPILHDD_01769 1.9e-96 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
AFPILHDD_01771 4.1e-118 K UTRA domain
AFPILHDD_01772 1.8e-59 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AFPILHDD_01773 3.6e-182 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AFPILHDD_01774 9.8e-18 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AFPILHDD_01775 3.2e-21 lctP C L-lactate permease
AFPILHDD_01776 6.1e-90 lctP C L-lactate permease
AFPILHDD_01777 3e-51 lctP C L-lactate permease
AFPILHDD_01778 9.3e-43 S Enterocin A Immunity
AFPILHDD_01779 9.1e-42 Z012_06740 S Fic/DOC family
AFPILHDD_01780 0.0 pepF E oligoendopeptidase F
AFPILHDD_01781 2.4e-215 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AFPILHDD_01782 7.2e-25 S Protein of unknown function (DUF554)
AFPILHDD_01786 1.4e-261 L Transposase IS66 family
AFPILHDD_01787 5.8e-32 S Transposase C of IS166 homeodomain
AFPILHDD_01788 2.5e-64 XK27_01125 L IS66 Orf2 like protein
AFPILHDD_01789 1.8e-18
AFPILHDD_01790 1.2e-154 L Transposase
AFPILHDD_01791 1e-123 L Transposase
AFPILHDD_01792 5.7e-176 L Probable transposase
AFPILHDD_01793 2.1e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
AFPILHDD_01794 1.2e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AFPILHDD_01795 2.4e-206 csaB M Glycosyl transferases group 1
AFPILHDD_01796 8.6e-136 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
AFPILHDD_01797 0.0 KLT Protein kinase domain
AFPILHDD_01798 3.7e-42 KLT serine threonine protein kinase
AFPILHDD_01799 1.5e-181 V ABC transporter transmembrane region
AFPILHDD_01800 4.4e-80 V ABC transporter transmembrane region
AFPILHDD_01801 8.6e-80 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
AFPILHDD_01803 0.0 uvrA3 L excinuclease ABC, A subunit
AFPILHDD_01804 9.8e-94 yyaR K Acetyltransferase (GNAT) domain
AFPILHDD_01805 1e-116 mta K helix_turn_helix, mercury resistance
AFPILHDD_01806 5.3e-07 S ParE toxin of type II toxin-antitoxin system, parDE
AFPILHDD_01807 2.4e-36 L An automated process has identified a potential problem with this gene model
AFPILHDD_01808 2.8e-20 ybbH_2 K rpiR family
AFPILHDD_01810 5.5e-118 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
AFPILHDD_01811 1.4e-127 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
AFPILHDD_01812 1.6e-146 cof S haloacid dehalogenase-like hydrolase
AFPILHDD_01813 2.4e-218 pbuG S permease
AFPILHDD_01814 2.2e-174 S cog cog1373
AFPILHDD_01815 1.6e-38 L transposase, IS605 OrfB family
AFPILHDD_01816 0.0 O Belongs to the peptidase S8 family
AFPILHDD_01817 2.2e-75 O Belongs to the peptidase S8 family
AFPILHDD_01818 7.1e-64 V efflux transmembrane transporter activity
AFPILHDD_01819 4.8e-82 racA K Domain of unknown function (DUF1836)
AFPILHDD_01820 1.2e-154 yitS S EDD domain protein, DegV family
AFPILHDD_01822 2.1e-19 UW LPXTG-motif cell wall anchor domain protein
AFPILHDD_01823 3.1e-150 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
AFPILHDD_01824 9.8e-55
AFPILHDD_01825 1.1e-138 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
AFPILHDD_01826 6.9e-136 mgtC S MgtC family
AFPILHDD_01827 1.9e-09 5.3.3.2 C FMN-dependent dehydrogenase
AFPILHDD_01828 1.4e-21 bglH 3.2.1.86 GT1 G beta-glucosidase activity
AFPILHDD_01829 1.6e-52 eutP E Ethanolamine utilisation - propanediol utilisation
AFPILHDD_01830 2.8e-43 U FFAT motif binding
AFPILHDD_01831 8.8e-85 U FFAT motif binding
AFPILHDD_01832 5.2e-107 S ECF-type riboflavin transporter, S component
AFPILHDD_01833 0.0 ykoD_2 S AAA domain, putative AbiEii toxin, Type IV TA system
AFPILHDD_01834 1.7e-154 P ABC-type cobalt transport system permease component CbiQ and related transporters
AFPILHDD_01836 1.7e-43
AFPILHDD_01838 6.8e-152 glcU U sugar transport
AFPILHDD_01839 2e-48
AFPILHDD_01840 2.5e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
AFPILHDD_01841 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
AFPILHDD_01842 7.5e-146 yvpB S Peptidase_C39 like family
AFPILHDD_01843 1.5e-83 S Threonine/Serine exporter, ThrE
AFPILHDD_01844 6.1e-140 thrE S Putative threonine/serine exporter
AFPILHDD_01845 1.1e-292 S ABC transporter
AFPILHDD_01846 1.7e-55
AFPILHDD_01847 5.6e-103 rimL J Acetyltransferase (GNAT) domain
AFPILHDD_01848 6.5e-56 L Transposase
AFPILHDD_01849 5.8e-297 ytgP S Polysaccharide biosynthesis protein
AFPILHDD_01850 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
AFPILHDD_01851 3.5e-120 3.6.1.27 I Acid phosphatase homologues
AFPILHDD_01852 6.2e-43 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
AFPILHDD_01853 4.6e-199 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_01854 4.7e-96 ywnH 2.3.1.183 M acetyltransferase (GNAT) family
AFPILHDD_01855 2.2e-15 K Penicillinase repressor
AFPILHDD_01856 0.0 copB 3.6.3.4 P P-type ATPase
AFPILHDD_01857 2.7e-39 mdt(A) EGP Major facilitator Superfamily
AFPILHDD_01858 1.7e-66 mdt(A) EGP Major facilitator Superfamily
AFPILHDD_01859 9.6e-217 mdtG EGP Major facilitator Superfamily
AFPILHDD_01860 1.6e-261 emrY EGP Major facilitator Superfamily
AFPILHDD_01861 1.5e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AFPILHDD_01862 4e-240 pyrP F Permease
AFPILHDD_01863 5e-39 S reductase
AFPILHDD_01864 2.3e-41 S reductase
AFPILHDD_01865 9.7e-169 2.7.7.73, 2.7.7.80 H Involved in molybdopterin and thiamine biosynthesis, family 2
AFPILHDD_01867 5.1e-274 V ABC-type multidrug transport system, ATPase and permease components
AFPILHDD_01868 2.6e-286 V ABC-type multidrug transport system, ATPase and permease components
AFPILHDD_01869 5.5e-21 ynbB 4.4.1.1 P aluminum resistance
AFPILHDD_01870 2.4e-64 ynbB 4.4.1.1 P aluminum resistance
AFPILHDD_01871 1.4e-264 glnA 6.3.1.2 E glutamine synthetase
AFPILHDD_01872 4.6e-136
AFPILHDD_01873 1.9e-164
AFPILHDD_01874 2.9e-150
AFPILHDD_01875 1.6e-239 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
AFPILHDD_01876 1.1e-131 znuB U ABC 3 transport family
AFPILHDD_01877 7.2e-118 fhuC P ABC transporter
AFPILHDD_01878 4e-159 psaA P Belongs to the bacterial solute-binding protein 9 family
AFPILHDD_01879 5.3e-79
AFPILHDD_01882 2.4e-83 S COG NOG38524 non supervised orthologous group
AFPILHDD_01883 4.7e-36 L PFAM transposase, IS4 family protein
AFPILHDD_01884 5.4e-76 L PFAM transposase, IS4 family protein
AFPILHDD_01885 3.4e-31 S HicB family
AFPILHDD_01886 1.2e-151 3.6.4.12 KL ATP-dependent helicase
AFPILHDD_01887 1.3e-11 G phosphotransferase system
AFPILHDD_01888 1.3e-85 dkgA 1.1.1.346 S L-ascorbic acid biosynthetic process
AFPILHDD_01889 6.4e-72 O OsmC-like protein
AFPILHDD_01890 5.5e-209 EGP Major facilitator Superfamily
AFPILHDD_01891 3.2e-117 sptS 2.7.13.3 T Histidine kinase
AFPILHDD_01892 3.1e-30 sptS 2.7.13.3 T Histidine kinase
AFPILHDD_01893 1.8e-35 K response regulator
AFPILHDD_01894 4.5e-33 L An automated process has identified a potential problem with this gene model
AFPILHDD_01895 1.1e-67 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
AFPILHDD_01896 5.7e-264 qacA EGP Major facilitator Superfamily
AFPILHDD_01897 1.1e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AFPILHDD_01900 2e-177 psaA P Belongs to the bacterial solute-binding protein 9 family
AFPILHDD_01903 2.8e-159 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AFPILHDD_01904 2e-164 dnaQ 2.7.7.7 L EXOIII
AFPILHDD_01905 8.5e-159 endA F DNA RNA non-specific endonuclease
AFPILHDD_01906 7.7e-282 pipD E Dipeptidase
AFPILHDD_01907 7.8e-100 3.6.1.27 I Acid phosphatase homologues
AFPILHDD_01908 3.3e-116 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AFPILHDD_01910 6.7e-189 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AFPILHDD_01911 8.1e-96 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AFPILHDD_01912 7.2e-16 ps301 K sequence-specific DNA binding
AFPILHDD_01913 1.8e-83 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
AFPILHDD_01914 1.4e-79 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
AFPILHDD_01917 6e-20
AFPILHDD_01919 2.1e-148 ptp2 3.1.3.48 T Tyrosine phosphatase family
AFPILHDD_01920 1.8e-51 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AFPILHDD_01921 4e-90 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AFPILHDD_01922 2.4e-81 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AFPILHDD_01923 5.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
AFPILHDD_01925 1.9e-132 cobQ S glutamine amidotransferase
AFPILHDD_01926 5.5e-62 S Protein of unknown function (DUF2974)
AFPILHDD_01927 2.8e-109 glnP P ABC transporter permease
AFPILHDD_01928 6.7e-108 gluC P ABC transporter permease
AFPILHDD_01929 1.5e-152 glnH ET ABC transporter substrate-binding protein
AFPILHDD_01930 3.3e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFPILHDD_01931 5.9e-68 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
AFPILHDD_01932 3.1e-66 2.4.1.83 GT2 S GtrA-like protein
AFPILHDD_01933 8e-171 yfdH GT2 M Glycosyltransferase like family 2
AFPILHDD_01934 2.1e-57 L transposase, IS605 OrfB family
AFPILHDD_01935 1.2e-160 L transposase, IS605 OrfB family
AFPILHDD_01936 1.7e-185 S SLAP domain
AFPILHDD_01937 7e-186 S Bacteriocin helveticin-J
AFPILHDD_01938 2e-160
AFPILHDD_01939 1.3e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
AFPILHDD_01940 1.8e-139 fruR K DeoR C terminal sensor domain
AFPILHDD_01943 8.7e-27
AFPILHDD_01944 7.1e-33
AFPILHDD_01945 1e-34 yozG K Transcriptional regulator
AFPILHDD_01946 1.7e-56 L Transposase
AFPILHDD_01947 3e-37
AFPILHDD_01948 6.4e-58 malY 4.4.1.8 E Aminotransferase, class I
AFPILHDD_01949 1.4e-89 malY 4.4.1.8 E Aminotransferase, class I
AFPILHDD_01950 1.8e-56
AFPILHDD_01951 3.3e-245 brnQ U Component of the transport system for branched-chain amino acids
AFPILHDD_01953 4e-30
AFPILHDD_01954 3.6e-48 L An automated process has identified a potential problem with this gene model
AFPILHDD_01955 9.1e-15
AFPILHDD_01956 8.6e-41 gcvR T Belongs to the UPF0237 family
AFPILHDD_01957 4.5e-247 XK27_08635 S UPF0210 protein
AFPILHDD_01958 1.4e-237 G Bacterial extracellular solute-binding protein
AFPILHDD_01959 2.4e-265 lsa S ABC transporter
AFPILHDD_01960 1.9e-74 S Protein of unknown function (DUF3021)
AFPILHDD_01961 6.6e-75 K LytTr DNA-binding domain
AFPILHDD_01962 9.8e-38 S Bacterial toxin of type II toxin-antitoxin system, YafQ
AFPILHDD_01963 8e-42 S RelB antitoxin
AFPILHDD_01964 2.8e-100 L Integrase
AFPILHDD_01965 7.2e-47
AFPILHDD_01966 1.1e-83 FG adenosine 5'-monophosphoramidase activity
AFPILHDD_01967 3.9e-135 L Psort location Cytoplasmic, score
AFPILHDD_01968 4.6e-42 L Psort location Cytoplasmic, score
AFPILHDD_01969 7.6e-252 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AFPILHDD_01970 2.9e-99 J Acetyltransferase (GNAT) domain
AFPILHDD_01971 4.4e-38 yjbF S SNARE associated Golgi protein
AFPILHDD_01972 1.3e-36 yjbF S SNARE associated Golgi protein
AFPILHDD_01973 8.2e-27 L Transposase
AFPILHDD_01974 1.6e-121 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AFPILHDD_01975 2e-42 gmuR K UTRA
AFPILHDD_01976 7.5e-83 gmuR K UTRA
AFPILHDD_01977 9.1e-61 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AFPILHDD_01979 1.3e-128 XK27_08435 K UTRA
AFPILHDD_01980 2.8e-229 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
AFPILHDD_01983 3.4e-41 L transposase, IS605 OrfB family
AFPILHDD_01984 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
AFPILHDD_01985 1e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
AFPILHDD_01986 8.3e-176 degV S DegV family
AFPILHDD_01987 3.8e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
AFPILHDD_01989 4.7e-36
AFPILHDD_01990 1.2e-231 pbuG S permease
AFPILHDD_01991 4e-133 K helix_turn_helix, mercury resistance
AFPILHDD_01992 3.2e-10 S cog cog1373
AFPILHDD_01993 1.7e-56 L Transposase
AFPILHDD_01994 1.3e-24 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AFPILHDD_01995 4.7e-182 S Oxidoreductase family, NAD-binding Rossmann fold
AFPILHDD_01996 2e-129 K UTRA
AFPILHDD_01997 1.1e-26 L Transposase
AFPILHDD_01998 1.2e-202 lsa S ABC transporter
AFPILHDD_01999 5.6e-25 ykuL S IMP dehydrogenase activity
AFPILHDD_02000 3.5e-211 ywhK S Membrane
AFPILHDD_02001 2.2e-50
AFPILHDD_02003 1.1e-92 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
AFPILHDD_02004 3.4e-22
AFPILHDD_02005 2.1e-102 S LexA-binding, inner membrane-associated putative hydrolase
AFPILHDD_02006 9.9e-277 M domain protein
AFPILHDD_02007 8.2e-27 L Transposase
AFPILHDD_02008 2.6e-10 V ABC transporter (Permease)
AFPILHDD_02009 5.9e-106 L Resolvase, N terminal domain
AFPILHDD_02010 2.7e-257 L Probable transposase
AFPILHDD_02011 9.4e-68 yslB S Protein of unknown function (DUF2507)
AFPILHDD_02012 1.8e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
AFPILHDD_02013 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AFPILHDD_02014 1.3e-84 L Transposase
AFPILHDD_02015 2e-23 G Glycosyl hydrolases family 8
AFPILHDD_02016 4.4e-64 G Glycosyl hydrolases family 8
AFPILHDD_02017 4.7e-17 S Peptidase propeptide and YPEB domain
AFPILHDD_02019 1.7e-96 L An automated process has identified a potential problem with this gene model
AFPILHDD_02020 5.1e-44
AFPILHDD_02021 3.3e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AFPILHDD_02022 4.1e-153 ykuT M mechanosensitive ion channel
AFPILHDD_02023 2e-68 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AFPILHDD_02024 1.2e-112 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AFPILHDD_02025 7.8e-70 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
AFPILHDD_02026 8.9e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AFPILHDD_02027 2e-43 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_02028 2.9e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AFPILHDD_02029 8.4e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AFPILHDD_02030 3.6e-151 xerD L Phage integrase, N-terminal SAM-like domain
AFPILHDD_02032 4.6e-45 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
AFPILHDD_02033 1.6e-60 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
AFPILHDD_02036 8e-241 amtB P ammonium transporter
AFPILHDD_02037 1e-109 2.7.1.89 M Phosphotransferase enzyme family
AFPILHDD_02040 6e-16 lhr L DEAD DEAH box helicase
AFPILHDD_02041 5.1e-60
AFPILHDD_02042 5.3e-141 S Uncharacterized protein conserved in bacteria (DUF2263)
AFPILHDD_02043 3e-26 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AFPILHDD_02044 1.8e-153 S hydrolase
AFPILHDD_02045 1.8e-37 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
AFPILHDD_02046 5.1e-33 L COG2826 Transposase and inactivated derivatives, IS30 family
AFPILHDD_02047 7.3e-269 L COG2963 Transposase and inactivated derivatives
AFPILHDD_02048 1.2e-25 L Transposase
AFPILHDD_02050 1.2e-137 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
AFPILHDD_02052 7.4e-68
AFPILHDD_02053 4.5e-50
AFPILHDD_02054 3e-15
AFPILHDD_02055 2.3e-10
AFPILHDD_02056 6.8e-66 S Cysteine-rich secretory protein family
AFPILHDD_02057 2.8e-16 emrY EGP Major facilitator Superfamily
AFPILHDD_02058 1e-29 emrY EGP Major facilitator Superfamily
AFPILHDD_02063 2.9e-27 L An automated process has identified a potential problem with this gene model
AFPILHDD_02064 1.9e-138 M domain protein
AFPILHDD_02065 3e-213 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_02066 1.4e-127 3.6.1.13, 3.6.1.55 F NUDIX domain
AFPILHDD_02067 7.9e-50 L COG2963 Transposase and inactivated derivatives
AFPILHDD_02068 5.1e-63 K LysR substrate binding domain
AFPILHDD_02069 1e-07 K LysR substrate binding domain
AFPILHDD_02070 1.3e-132 mdlA V ABC transporter
AFPILHDD_02071 5.6e-197 L COG2826 Transposase and inactivated derivatives, IS30 family
AFPILHDD_02072 3.6e-134 yvdE K helix_turn _helix lactose operon repressor
AFPILHDD_02073 4.2e-33 L COG2826 Transposase and inactivated derivatives, IS30 family
AFPILHDD_02074 6.5e-97 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_02084 1.3e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AFPILHDD_02085 1.2e-13 L Transposase
AFPILHDD_02086 6e-54 L An automated process has identified a potential problem with this gene model
AFPILHDD_02088 1.8e-75 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
AFPILHDD_02089 4.7e-138 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_02090 1.4e-19 L transposase, IS605 OrfB family
AFPILHDD_02091 9e-12 O Belongs to the peptidase S8 family
AFPILHDD_02092 1e-113 L Putative transposase DNA-binding domain
AFPILHDD_02093 7.2e-20 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AFPILHDD_02094 2.2e-88 L Transposase
AFPILHDD_02095 2e-49 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFPILHDD_02096 2.2e-30 L Transposase
AFPILHDD_02098 1.3e-11 L Transposase
AFPILHDD_02099 3.7e-20 L Transposase
AFPILHDD_02100 1.6e-25 S Uncharacterised protein family (UPF0236)
AFPILHDD_02101 1.8e-26 L Transposase
AFPILHDD_02108 2.4e-36 L An automated process has identified a potential problem with this gene model
AFPILHDD_02109 8.3e-24 G Major Facilitator Superfamily
AFPILHDD_02110 6.4e-28 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)