ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDKNMLBO_00001 2e-244 S zinc finger
PDKNMLBO_00002 2.2e-70 S Bacterial PH domain
PDKNMLBO_00003 1.5e-76
PDKNMLBO_00004 7.2e-261 V Domain of unknown function (DUF3427)
PDKNMLBO_00005 5.4e-104 KL Domain of unknown function (DUF3427)
PDKNMLBO_00006 4.1e-71 L Transposase IS200 like
PDKNMLBO_00007 9.2e-222 L Psort location Cytoplasmic, score 8.87
PDKNMLBO_00008 3.4e-21 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PDKNMLBO_00009 0.0 helD 3.6.4.12 L Psort location Cytoplasmic, score 8.87
PDKNMLBO_00010 2.8e-185 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
PDKNMLBO_00011 1.5e-70 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PDKNMLBO_00012 1.6e-232 aspB E Aminotransferase class-V
PDKNMLBO_00013 3e-168 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PDKNMLBO_00014 1.3e-99 tmp1 S Domain of unknown function (DUF4391)
PDKNMLBO_00015 7e-198 S Endonuclease/Exonuclease/phosphatase family
PDKNMLBO_00017 7e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDKNMLBO_00018 2.6e-244 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDKNMLBO_00019 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
PDKNMLBO_00020 1.6e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDKNMLBO_00021 3.9e-156 hgdC I BadF/BadG/BcrA/BcrD ATPase family
PDKNMLBO_00022 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
PDKNMLBO_00023 1.6e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
PDKNMLBO_00024 4.2e-115 K Bacterial regulatory proteins, tetR family
PDKNMLBO_00025 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
PDKNMLBO_00026 1.7e-111 K Bacterial regulatory proteins, tetR family
PDKNMLBO_00027 1.9e-218 G Transporter major facilitator family protein
PDKNMLBO_00029 1.2e-271 srfJ1 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
PDKNMLBO_00031 2.6e-20 Q Belongs to the P-Pant transferase superfamily
PDKNMLBO_00032 8.1e-123 ydjE EGP Major facilitator Superfamily
PDKNMLBO_00033 1.9e-209 hsvB 6.3.2.4 M Belongs to the D-alanine--D-alanine ligase family
PDKNMLBO_00035 3.5e-72 dap2 E peptidase
PDKNMLBO_00036 9.3e-199 P Major Facilitator Superfamily
PDKNMLBO_00037 8.9e-247 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PDKNMLBO_00038 0.0 3.2.1.37 GH43 G Glycosyl hydrolases family 43
PDKNMLBO_00039 1.1e-239 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PDKNMLBO_00040 2.3e-108 K Bacterial regulatory proteins, tetR family
PDKNMLBO_00041 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
PDKNMLBO_00042 8e-221 lmrB U Major Facilitator Superfamily
PDKNMLBO_00043 6.3e-14 K helix_turn_helix, mercury resistance
PDKNMLBO_00044 6.8e-118 K Periplasmic binding protein domain
PDKNMLBO_00045 4.4e-215 EGP Major facilitator Superfamily
PDKNMLBO_00046 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
PDKNMLBO_00047 2.4e-181 G Transporter major facilitator family protein
PDKNMLBO_00048 5.7e-190 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDKNMLBO_00049 9.6e-106 K Bacterial regulatory proteins, tetR family
PDKNMLBO_00050 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PDKNMLBO_00051 1.3e-96 K MarR family
PDKNMLBO_00052 0.0 V ABC transporter, ATP-binding protein
PDKNMLBO_00053 0.0 V ABC transporter transmembrane region
PDKNMLBO_00054 2.6e-183 lacR K Transcriptional regulator, LacI family
PDKNMLBO_00055 1e-257 lacS G Psort location CytoplasmicMembrane, score 10.00
PDKNMLBO_00056 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDKNMLBO_00057 0.0 cas3 L DEAD-like helicases superfamily
PDKNMLBO_00058 2e-137 cas5d S CRISPR-associated protein (Cas_Cas5)
PDKNMLBO_00059 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
PDKNMLBO_00060 4.5e-152 csd2 L CRISPR-associated protein Cas7
PDKNMLBO_00061 1.7e-130 cas4 3.1.12.1 L Domain of unknown function DUF83
PDKNMLBO_00062 9.5e-197 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDKNMLBO_00063 6.6e-47 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDKNMLBO_00064 1e-119 S Phospholipase/Carboxylesterase
PDKNMLBO_00065 3e-242 patB 4.4.1.8 E Aminotransferase, class I II
PDKNMLBO_00066 1.1e-186 K LysR substrate binding domain protein
PDKNMLBO_00067 1.5e-160 S Patatin-like phospholipase
PDKNMLBO_00068 3.8e-176 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
PDKNMLBO_00069 5e-301 E ABC transporter, substrate-binding protein, family 5
PDKNMLBO_00070 3.5e-21 S Patatin-like phospholipase
PDKNMLBO_00071 2.2e-145 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDKNMLBO_00072 7.8e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PDKNMLBO_00073 6.2e-117 S Vitamin K epoxide reductase
PDKNMLBO_00074 5e-173 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
PDKNMLBO_00075 3.6e-32 S Protein of unknown function (DUF3107)
PDKNMLBO_00076 1.2e-269 mphA S Aminoglycoside phosphotransferase
PDKNMLBO_00077 4.8e-282 uvrD2 3.6.4.12 L DNA helicase
PDKNMLBO_00078 1.7e-285 S Zincin-like metallopeptidase
PDKNMLBO_00079 1e-154 lon T Belongs to the peptidase S16 family
PDKNMLBO_00080 6.5e-75 S Protein of unknown function (DUF3052)
PDKNMLBO_00082 6e-235 2.7.11.1 NU Tfp pilus assembly protein FimV
PDKNMLBO_00083 3.2e-217 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PDKNMLBO_00084 5.6e-225 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PDKNMLBO_00085 0.0 I acetylesterase activity
PDKNMLBO_00086 7.3e-135 recO L Involved in DNA repair and RecF pathway recombination
PDKNMLBO_00087 4e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDKNMLBO_00088 4.1e-218 iunH1 3.2.2.1 F nucleoside hydrolase
PDKNMLBO_00089 1.6e-205 P NMT1/THI5 like
PDKNMLBO_00090 1.4e-142 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00091 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
PDKNMLBO_00092 2.8e-241 lacY P LacY proton/sugar symporter
PDKNMLBO_00093 1.1e-192 K helix_turn _helix lactose operon repressor
PDKNMLBO_00094 3e-60 S Thiamine-binding protein
PDKNMLBO_00095 1.9e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDKNMLBO_00096 2.4e-133 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDKNMLBO_00097 4.9e-154 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PDKNMLBO_00098 0.0
PDKNMLBO_00099 0.0 pilT NU Type II/IV secretion system protein
PDKNMLBO_00100 0.0 pulE NU Type II/IV secretion system protein
PDKNMLBO_00101 4.9e-137 ppdC NU Prokaryotic N-terminal methylation motif
PDKNMLBO_00102 1.6e-104 S Prokaryotic N-terminal methylation motif
PDKNMLBO_00103 1.8e-40 pilA NU Prokaryotic N-terminal methylation motif
PDKNMLBO_00104 3.8e-230 pilC U Type II secretion system (T2SS), protein F
PDKNMLBO_00105 0.0
PDKNMLBO_00106 5.3e-150 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PDKNMLBO_00107 3e-190 pilM NU Type IV pilus assembly protein PilM;
PDKNMLBO_00108 8.1e-166 pilN NU PFAM Fimbrial assembly family protein
PDKNMLBO_00109 1e-105 S Pilus assembly protein, PilO
PDKNMLBO_00110 1.3e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
PDKNMLBO_00111 2.2e-245 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDKNMLBO_00112 5.6e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDKNMLBO_00113 8.9e-81 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDKNMLBO_00114 3.4e-40 yggT S YGGT family
PDKNMLBO_00115 4.5e-31 3.1.21.3 V DivIVA protein
PDKNMLBO_00116 4.3e-87 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDKNMLBO_00117 4.9e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PDKNMLBO_00118 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
PDKNMLBO_00119 2.4e-259 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDKNMLBO_00120 2.5e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDKNMLBO_00121 1.5e-109 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
PDKNMLBO_00122 6.5e-121
PDKNMLBO_00123 1.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDKNMLBO_00124 4.1e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
PDKNMLBO_00125 3.1e-264 glnA2 6.3.1.2 E glutamine synthetase
PDKNMLBO_00126 2.1e-218 S Domain of unknown function (DUF5067)
PDKNMLBO_00127 3.6e-139 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PDKNMLBO_00128 8e-219 EGP Major facilitator Superfamily
PDKNMLBO_00129 3.2e-118 ytrE V ATPases associated with a variety of cellular activities
PDKNMLBO_00130 8.7e-29 2.7.13.3 T Histidine kinase
PDKNMLBO_00131 5.4e-57 T helix_turn_helix, Lux Regulon
PDKNMLBO_00132 3.4e-83
PDKNMLBO_00133 3.2e-187 V N-Acetylmuramoyl-L-alanine amidase
PDKNMLBO_00134 4.3e-192
PDKNMLBO_00135 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
PDKNMLBO_00136 1.1e-112 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
PDKNMLBO_00137 1.1e-270 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDKNMLBO_00138 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
PDKNMLBO_00139 1.3e-149 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDKNMLBO_00140 2.2e-131 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDKNMLBO_00141 1e-53 M Lysin motif
PDKNMLBO_00142 2.9e-84 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDKNMLBO_00143 8.7e-218 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PDKNMLBO_00144 0.0 L DNA helicase
PDKNMLBO_00145 7e-92 mraZ K Belongs to the MraZ family
PDKNMLBO_00146 1.3e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDKNMLBO_00147 1.8e-62 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PDKNMLBO_00148 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
PDKNMLBO_00149 4.2e-153 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDKNMLBO_00150 3.8e-263 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDKNMLBO_00151 3e-193 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDKNMLBO_00152 1.4e-254 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDKNMLBO_00153 8.1e-203 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
PDKNMLBO_00154 6.3e-216 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDKNMLBO_00155 1.5e-270 murC 6.3.2.8 M Belongs to the MurCDEF family
PDKNMLBO_00156 4.6e-141 ftsQ 6.3.2.4 D Cell division protein FtsQ
PDKNMLBO_00157 1.4e-247 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PDKNMLBO_00158 1.9e-28
PDKNMLBO_00159 1.1e-218 S Metal-independent alpha-mannosidase (GH125)
PDKNMLBO_00160 9.8e-166 2.7.1.4 G pfkB family carbohydrate kinase
PDKNMLBO_00161 1.3e-216 GK ROK family
PDKNMLBO_00162 4.7e-307 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
PDKNMLBO_00163 1.7e-188 dppB EP Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00164 4.7e-192 dppC EP Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00165 0.0 P Belongs to the ABC transporter superfamily
PDKNMLBO_00166 4e-95 3.6.1.55 F NUDIX domain
PDKNMLBO_00167 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
PDKNMLBO_00168 2.5e-289 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
PDKNMLBO_00169 3.6e-185 V Acetyltransferase (GNAT) domain
PDKNMLBO_00170 4e-276 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDKNMLBO_00171 1.3e-97 sigH K Belongs to the sigma-70 factor family. ECF subfamily
PDKNMLBO_00172 1e-35
PDKNMLBO_00173 4.3e-188 galM 5.1.3.3 G Aldose 1-epimerase
PDKNMLBO_00174 7.9e-172 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PDKNMLBO_00175 2.1e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDKNMLBO_00176 1.8e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDKNMLBO_00177 3.2e-109 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
PDKNMLBO_00178 1.6e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDKNMLBO_00179 2.1e-25 rpmI J Ribosomal protein L35
PDKNMLBO_00180 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDKNMLBO_00181 2e-177 xerD D recombinase XerD
PDKNMLBO_00182 6.8e-153 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PDKNMLBO_00183 2.1e-151 nrtR 3.6.1.55 F NUDIX hydrolase
PDKNMLBO_00184 1.7e-249 naiP U Sugar (and other) transporter
PDKNMLBO_00185 0.0 typA T Elongation factor G C-terminus
PDKNMLBO_00186 4e-104
PDKNMLBO_00187 4.8e-190 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
PDKNMLBO_00188 8.9e-195 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
PDKNMLBO_00189 4.4e-42
PDKNMLBO_00190 1.6e-171 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PDKNMLBO_00191 0.0 E ABC transporter, substrate-binding protein, family 5
PDKNMLBO_00192 0.0 E ABC transporter, substrate-binding protein, family 5
PDKNMLBO_00193 1.6e-155 dppB EP Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00194 4.1e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
PDKNMLBO_00195 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
PDKNMLBO_00196 3e-172 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
PDKNMLBO_00197 3.7e-151 S Protein of unknown function (DUF3710)
PDKNMLBO_00198 2.4e-133 S Protein of unknown function (DUF3159)
PDKNMLBO_00199 2.8e-243 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDKNMLBO_00200 2e-74
PDKNMLBO_00201 0.0 ctpE P E1-E2 ATPase
PDKNMLBO_00202 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PDKNMLBO_00203 2.9e-249 VP1224 V Psort location CytoplasmicMembrane, score 9.99
PDKNMLBO_00204 4.7e-109 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
PDKNMLBO_00205 9.8e-213 rhaR1 K helix_turn_helix, arabinose operon control protein
PDKNMLBO_00206 1.1e-229 V ABC-2 family transporter protein
PDKNMLBO_00207 1.7e-224 V ABC-2 family transporter protein
PDKNMLBO_00208 4.4e-191 V ATPases associated with a variety of cellular activities
PDKNMLBO_00209 1.1e-245 T Histidine kinase
PDKNMLBO_00210 9e-116 K helix_turn_helix, Lux Regulon
PDKNMLBO_00211 0.0 S Protein of unknown function DUF262
PDKNMLBO_00212 1.8e-127 K helix_turn_helix, Lux Regulon
PDKNMLBO_00213 1.1e-242 T Histidine kinase
PDKNMLBO_00214 6.7e-60 S Domain of unknown function (DUF5067)
PDKNMLBO_00215 1.7e-127 ybhL S Belongs to the BI1 family
PDKNMLBO_00216 8e-177 ydeD EG EamA-like transporter family
PDKNMLBO_00217 4.2e-155 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
PDKNMLBO_00218 1e-281 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PDKNMLBO_00219 4.2e-192 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDKNMLBO_00220 7.2e-11 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDKNMLBO_00221 0.0 ftsK D FtsK SpoIIIE family protein
PDKNMLBO_00222 1.9e-124 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDKNMLBO_00223 5.5e-98 cinA 3.5.1.42 S Belongs to the CinA family
PDKNMLBO_00224 1.6e-80 K Helix-turn-helix XRE-family like proteins
PDKNMLBO_00225 1.8e-44 S Protein of unknown function (DUF3046)
PDKNMLBO_00226 5.4e-212 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDKNMLBO_00227 2e-118 recX S Modulates RecA activity
PDKNMLBO_00228 3.3e-118 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDKNMLBO_00229 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDKNMLBO_00230 3.4e-194 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDKNMLBO_00231 1.3e-97
PDKNMLBO_00232 1.9e-132 plsC2 2.3.1.51 I Phosphate acyltransferases
PDKNMLBO_00233 0.0 pknL 2.7.11.1 KLT PASTA
PDKNMLBO_00234 4.5e-197 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
PDKNMLBO_00235 1.1e-118
PDKNMLBO_00236 3.4e-173 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDKNMLBO_00237 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PDKNMLBO_00238 1.5e-222 G Major Facilitator Superfamily
PDKNMLBO_00239 5.6e-242 T PhoQ Sensor
PDKNMLBO_00240 2.4e-79 S Protein of unknown function (DUF2975)
PDKNMLBO_00241 5.8e-32 yozG K Cro/C1-type HTH DNA-binding domain
PDKNMLBO_00242 0.0 lhr L DEAD DEAH box helicase
PDKNMLBO_00243 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PDKNMLBO_00244 3e-234 S Type I phosphodiesterase / nucleotide pyrophosphatase
PDKNMLBO_00245 7e-147 S Protein of unknown function (DUF3071)
PDKNMLBO_00246 1e-47 S Domain of unknown function (DUF4193)
PDKNMLBO_00247 1.3e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PDKNMLBO_00248 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDKNMLBO_00249 1.2e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDKNMLBO_00250 5.7e-237 dinF V MatE
PDKNMLBO_00251 0.0 S LPXTG-motif cell wall anchor domain protein
PDKNMLBO_00252 8.9e-110 S Sucrose-6F-phosphate phosphohydrolase
PDKNMLBO_00254 1.8e-150 metQ P NLPA lipoprotein
PDKNMLBO_00255 2.5e-174 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDKNMLBO_00256 1.3e-93 metI P Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00257 1.2e-211 S Peptidase dimerisation domain
PDKNMLBO_00258 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PDKNMLBO_00259 4.5e-31
PDKNMLBO_00260 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PDKNMLBO_00261 7.4e-166 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDKNMLBO_00262 9e-81 S Protein of unknown function (DUF3000)
PDKNMLBO_00263 7.6e-236 rnd 3.1.13.5 J 3'-5' exonuclease
PDKNMLBO_00264 2e-231 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDKNMLBO_00265 7.7e-132 yebE S DUF218 domain
PDKNMLBO_00266 3.8e-128 E Psort location Cytoplasmic, score 8.87
PDKNMLBO_00267 3e-159 O Thioredoxin
PDKNMLBO_00268 1.2e-119 msbA2 3.6.3.44 V ABC transporter transmembrane region
PDKNMLBO_00269 4.2e-138 3.6.3.44 V ABC transporter
PDKNMLBO_00270 0.0 KLT Lanthionine synthetase C-like protein
PDKNMLBO_00271 3.2e-121 K helix_turn_helix, Lux Regulon
PDKNMLBO_00272 4.8e-136 2.7.13.3 T Histidine kinase
PDKNMLBO_00274 1.3e-42 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PDKNMLBO_00275 4.6e-148 S phosphoesterase or phosphohydrolase
PDKNMLBO_00277 2.1e-21
PDKNMLBO_00278 8.5e-101 S Putative inner membrane protein (DUF1819)
PDKNMLBO_00279 7.8e-126 S Domain of unknown function (DUF1788)
PDKNMLBO_00280 0.0 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
PDKNMLBO_00281 0.0 LV DNA restriction-modification system
PDKNMLBO_00282 0.0 K SIR2-like domain
PDKNMLBO_00283 7.1e-257 lexA 3.6.4.12 K Putative DNA-binding domain
PDKNMLBO_00284 0.0 thiN 2.7.6.2 H PglZ domain
PDKNMLBO_00285 0.0 3.4.21.53 O Putative ATP-dependent Lon protease
PDKNMLBO_00286 2.9e-42
PDKNMLBO_00289 7.6e-62 S Protein of unknown function DUF262
PDKNMLBO_00290 2.2e-12
PDKNMLBO_00291 1.2e-123 3.2.1.8 S alpha beta
PDKNMLBO_00292 7.8e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDKNMLBO_00293 7.7e-188 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PDKNMLBO_00294 2.4e-112 kcsA U Ion channel
PDKNMLBO_00295 7.4e-38 pepC 3.4.22.40 E homocysteine catabolic process
PDKNMLBO_00296 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
PDKNMLBO_00297 2e-96 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDKNMLBO_00298 0.0 ecfA GP ABC transporter, ATP-binding protein
PDKNMLBO_00299 2.4e-47 yhbY J CRS1_YhbY
PDKNMLBO_00300 1.4e-144 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PDKNMLBO_00301 6.3e-201 S Glycosyltransferase, group 2 family protein
PDKNMLBO_00302 1.6e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
PDKNMLBO_00303 2.4e-220 E Aminotransferase class I and II
PDKNMLBO_00304 5e-145 bioM P ATPases associated with a variety of cellular activities
PDKNMLBO_00305 4.3e-308 2.8.2.22 S Arylsulfotransferase Ig-like domain
PDKNMLBO_00306 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDKNMLBO_00307 0.0 S Tetratricopeptide repeat
PDKNMLBO_00308 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDKNMLBO_00309 8.1e-202 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PDKNMLBO_00310 2.2e-84 ykoE S ABC-type cobalt transport system, permease component
PDKNMLBO_00311 2.3e-268 ykoD P ATPases associated with a variety of cellular activities
PDKNMLBO_00312 3.1e-145 cbiQ P Cobalt transport protein
PDKNMLBO_00313 7.2e-253 argE E Peptidase dimerisation domain
PDKNMLBO_00314 4.4e-93 S Protein of unknown function (DUF3043)
PDKNMLBO_00315 2.4e-246 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PDKNMLBO_00316 1.3e-142 S Domain of unknown function (DUF4191)
PDKNMLBO_00317 7.8e-282 glnA 6.3.1.2 E glutamine synthetase
PDKNMLBO_00318 4e-42 V DNA modification
PDKNMLBO_00319 8.3e-113 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
PDKNMLBO_00320 1.3e-16 L HNH endonuclease
PDKNMLBO_00322 4.5e-18
PDKNMLBO_00324 5e-96 yvdD 3.2.2.10 S Possible lysine decarboxylase
PDKNMLBO_00325 4.7e-157 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDKNMLBO_00326 1.2e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDKNMLBO_00327 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
PDKNMLBO_00328 4.9e-99
PDKNMLBO_00329 4.5e-205 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PDKNMLBO_00330 6.7e-215 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PDKNMLBO_00331 2.8e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PDKNMLBO_00332 1e-240 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
PDKNMLBO_00333 7.1e-186 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDKNMLBO_00334 5.4e-84 argR K Regulates arginine biosynthesis genes
PDKNMLBO_00335 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDKNMLBO_00336 1.3e-279 argH 4.3.2.1 E argininosuccinate lyase
PDKNMLBO_00337 3e-87 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDKNMLBO_00338 1.4e-131 S Putative ABC-transporter type IV
PDKNMLBO_00339 0.0 S Protein of unknown function (DUF975)
PDKNMLBO_00340 5.5e-250 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDKNMLBO_00341 1.5e-149 L Tetratricopeptide repeat
PDKNMLBO_00342 1.2e-191 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PDKNMLBO_00343 2.9e-134 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDKNMLBO_00344 3e-116 trkA P TrkA-N domain
PDKNMLBO_00345 2.1e-266 trkB P Cation transport protein
PDKNMLBO_00346 1.3e-187 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDKNMLBO_00347 1.4e-261 recN L May be involved in recombinational repair of damaged DNA
PDKNMLBO_00348 1.3e-122 S Haloacid dehalogenase-like hydrolase
PDKNMLBO_00349 7.4e-116 S ABC-2 family transporter protein
PDKNMLBO_00350 2.3e-173 V ATPases associated with a variety of cellular activities
PDKNMLBO_00351 1.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
PDKNMLBO_00352 2.5e-23 C Acetamidase/Formamidase family
PDKNMLBO_00353 4.6e-44 L transposition
PDKNMLBO_00354 0.0 S Histidine phosphatase superfamily (branch 2)
PDKNMLBO_00355 1.1e-95 S Pyridoxamine 5'-phosphate oxidase
PDKNMLBO_00356 8.8e-12 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_00357 1.6e-23 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_00358 4.1e-95 bcp 1.11.1.15 O Redoxin
PDKNMLBO_00359 1.4e-75 3.4.13.22 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PDKNMLBO_00360 2e-166 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PDKNMLBO_00361 6.9e-164 IQ Enoyl-(Acyl carrier protein) reductase
PDKNMLBO_00362 2.9e-141
PDKNMLBO_00363 6.3e-173 G Fic/DOC family
PDKNMLBO_00364 8.6e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
PDKNMLBO_00365 4.6e-233 EGP Major facilitator Superfamily
PDKNMLBO_00366 2.3e-284 thrC 4.2.3.1 E Threonine synthase N terminus
PDKNMLBO_00367 4.2e-250 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDKNMLBO_00368 1.5e-242 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDKNMLBO_00369 3.2e-101
PDKNMLBO_00370 1.8e-141 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDKNMLBO_00371 5e-190 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDKNMLBO_00373 1.8e-121
PDKNMLBO_00374 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
PDKNMLBO_00375 1.1e-83 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDKNMLBO_00376 1.9e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
PDKNMLBO_00377 5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDKNMLBO_00379 2.6e-135 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDKNMLBO_00380 5.8e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDKNMLBO_00381 6.1e-177 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
PDKNMLBO_00382 3.2e-225 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PDKNMLBO_00383 3e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDKNMLBO_00384 2.9e-72 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PDKNMLBO_00385 2.7e-296 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PDKNMLBO_00386 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDKNMLBO_00387 1.1e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDKNMLBO_00388 4.6e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDKNMLBO_00389 4.2e-97 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
PDKNMLBO_00390 1.9e-40 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
PDKNMLBO_00391 1.1e-155 hisG 2.4.2.17 F ATP phosphoribosyltransferase
PDKNMLBO_00392 1e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDKNMLBO_00393 2.6e-172 S Bacterial protein of unknown function (DUF881)
PDKNMLBO_00394 4.2e-45 sbp S Protein of unknown function (DUF1290)
PDKNMLBO_00395 1.6e-141 S Bacterial protein of unknown function (DUF881)
PDKNMLBO_00396 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDKNMLBO_00397 3.5e-112 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
PDKNMLBO_00398 5.2e-128 yebC K transcriptional regulatory protein
PDKNMLBO_00399 1e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PDKNMLBO_00400 1e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDKNMLBO_00401 5.6e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDKNMLBO_00402 1.8e-50 yajC U Preprotein translocase subunit
PDKNMLBO_00403 1.8e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDKNMLBO_00404 2.2e-221 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PDKNMLBO_00405 7.5e-161 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PDKNMLBO_00406 1.8e-246
PDKNMLBO_00407 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PDKNMLBO_00408 8.2e-34
PDKNMLBO_00409 6.4e-160 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDKNMLBO_00410 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDKNMLBO_00411 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
PDKNMLBO_00412 1.1e-69
PDKNMLBO_00414 3.7e-265 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
PDKNMLBO_00415 0.0 pafB K WYL domain
PDKNMLBO_00416 2.1e-54
PDKNMLBO_00417 0.0 helY L DEAD DEAH box helicase
PDKNMLBO_00418 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PDKNMLBO_00419 3e-141 pgp 3.1.3.18 S HAD-hyrolase-like
PDKNMLBO_00420 4.6e-61
PDKNMLBO_00421 9.7e-112 K helix_turn_helix, mercury resistance
PDKNMLBO_00422 4.7e-76 garA T Inner membrane component of T3SS, cytoplasmic domain
PDKNMLBO_00423 5.4e-36
PDKNMLBO_00424 3.2e-08
PDKNMLBO_00431 2.8e-156 S PAC2 family
PDKNMLBO_00432 6.9e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDKNMLBO_00433 5.1e-158 G Fructosamine kinase
PDKNMLBO_00434 5.2e-188 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDKNMLBO_00435 1e-196 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDKNMLBO_00436 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
PDKNMLBO_00437 4.2e-203 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PDKNMLBO_00438 2.6e-42 nadR H ATPase kinase involved in NAD metabolism
PDKNMLBO_00439 2.5e-68 pnuC H Nicotinamide mononucleotide transporter
PDKNMLBO_00440 1.2e-29 pnuC H Nicotinamide mononucleotide transporter
PDKNMLBO_00441 7.1e-09 pnuC H Nicotinamide mononucleotide transporter
PDKNMLBO_00442 8e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
PDKNMLBO_00443 2.6e-177 S Sucrose-6F-phosphate phosphohydrolase
PDKNMLBO_00444 2.4e-32 secG U Preprotein translocase SecG subunit
PDKNMLBO_00445 9.6e-149 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDKNMLBO_00446 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
PDKNMLBO_00447 1.3e-171 whiA K May be required for sporulation
PDKNMLBO_00448 4e-170 rapZ S Displays ATPase and GTPase activities
PDKNMLBO_00449 1.2e-182 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
PDKNMLBO_00450 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDKNMLBO_00451 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDKNMLBO_00452 2.7e-219 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_00453 0.0 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_00454 1.4e-139 S Domain of unknown function (DUF4194)
PDKNMLBO_00455 1.7e-272 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_00456 2e-13
PDKNMLBO_00458 2.8e-66 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PDKNMLBO_00459 4.7e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
PDKNMLBO_00460 3.5e-299 ybiT S ABC transporter
PDKNMLBO_00461 3.5e-164 S IMP dehydrogenase activity
PDKNMLBO_00462 2.6e-277 pepC 3.4.22.40 E Peptidase C1-like family
PDKNMLBO_00463 1.7e-145 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_00464 1e-141
PDKNMLBO_00465 3e-98
PDKNMLBO_00468 2.3e-182 cat P Cation efflux family
PDKNMLBO_00469 3.6e-76 S Psort location CytoplasmicMembrane, score
PDKNMLBO_00470 1.8e-220 yxjG_1 E Psort location Cytoplasmic, score 8.87
PDKNMLBO_00471 5.9e-143 4.1.1.44 S Carboxymuconolactone decarboxylase family
PDKNMLBO_00472 4.6e-199 adhB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PDKNMLBO_00473 6.7e-72 K MerR family regulatory protein
PDKNMLBO_00474 3.4e-118 ykoE S ABC-type cobalt transport system, permease component
PDKNMLBO_00475 4.5e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDKNMLBO_00476 2.6e-119 yoaP E YoaP-like
PDKNMLBO_00478 1.5e-194 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDKNMLBO_00479 7.6e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
PDKNMLBO_00480 6.4e-148 yeaZ 2.3.1.234 O Glycoprotease family
PDKNMLBO_00481 9.2e-94 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
PDKNMLBO_00482 6.5e-179 holA 2.7.7.7 L DNA polymerase III delta subunit
PDKNMLBO_00483 0.0 comE S Competence protein
PDKNMLBO_00484 2.2e-92 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
PDKNMLBO_00485 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDKNMLBO_00486 1.5e-142 ET Bacterial periplasmic substrate-binding proteins
PDKNMLBO_00487 5.7e-172 corA P CorA-like Mg2+ transporter protein
PDKNMLBO_00488 1.5e-163 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDKNMLBO_00489 5.2e-65 3.4.22.70 M Sortase family
PDKNMLBO_00490 5.6e-83 3.4.22.70 M Sortase family
PDKNMLBO_00491 2.7e-302 M domain protein
PDKNMLBO_00492 9.2e-71 pdxH S Pfam:Pyridox_oxidase
PDKNMLBO_00493 4.5e-233 XK27_00240 K Fic/DOC family
PDKNMLBO_00495 9.6e-118
PDKNMLBO_00496 2.5e-143 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDKNMLBO_00497 3.6e-67 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDKNMLBO_00498 2.6e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDKNMLBO_00499 7.6e-71 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDKNMLBO_00500 6.1e-108 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
PDKNMLBO_00501 1.1e-209 guaB 1.1.1.205 F IMP dehydrogenase family protein
PDKNMLBO_00502 5.3e-231 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
PDKNMLBO_00503 1.1e-268 G ABC transporter substrate-binding protein
PDKNMLBO_00504 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
PDKNMLBO_00505 4.3e-96 M Peptidase family M23
PDKNMLBO_00506 4.3e-63
PDKNMLBO_00509 4.3e-124 XK27_06785 V ABC transporter
PDKNMLBO_00510 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDKNMLBO_00511 2.1e-109 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDKNMLBO_00512 2.3e-139 S SdpI/YhfL protein family
PDKNMLBO_00513 1.8e-50 sdpR K helix_turn_helix, Arsenical Resistance Operon Repressor
PDKNMLBO_00514 6.1e-122 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDKNMLBO_00515 8.1e-218 yxjG_1 E Psort location Cytoplasmic, score 8.87
PDKNMLBO_00516 6.1e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDKNMLBO_00517 9.7e-108 J Acetyltransferase (GNAT) domain
PDKNMLBO_00518 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PDKNMLBO_00519 2.9e-162 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
PDKNMLBO_00520 1.2e-123 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDKNMLBO_00521 6.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDKNMLBO_00522 9.3e-155 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PDKNMLBO_00523 7e-178 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
PDKNMLBO_00524 1.1e-277 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDKNMLBO_00525 4.2e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PDKNMLBO_00526 3e-187 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PDKNMLBO_00527 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PDKNMLBO_00528 4e-19
PDKNMLBO_00529 6.4e-184 gguB U Branched-chain amino acid transport system / permease component
PDKNMLBO_00530 3e-271 araG 3.6.3.17 G ATPases associated with a variety of cellular activities
PDKNMLBO_00531 2.3e-186 G Periplasmic binding protein domain
PDKNMLBO_00532 5e-178 GK ROK family
PDKNMLBO_00533 7.1e-126 xylG 3.6.3.17 G ATPases associated with a variety of cellular activities
PDKNMLBO_00534 9.5e-29
PDKNMLBO_00535 3.4e-44 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PDKNMLBO_00536 1.6e-157 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
PDKNMLBO_00537 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PDKNMLBO_00538 4.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
PDKNMLBO_00539 1.8e-198 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PDKNMLBO_00540 9.3e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
PDKNMLBO_00541 7.6e-249 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
PDKNMLBO_00542 2e-74
PDKNMLBO_00543 2.6e-307 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PDKNMLBO_00544 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
PDKNMLBO_00545 2.5e-234 F Psort location CytoplasmicMembrane, score 10.00
PDKNMLBO_00546 3.6e-218 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
PDKNMLBO_00547 1.5e-288 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
PDKNMLBO_00548 5e-145 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PDKNMLBO_00549 1.5e-233 hemN H Involved in the biosynthesis of porphyrin-containing compound
PDKNMLBO_00550 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDKNMLBO_00551 2.9e-33 rpsT J Binds directly to 16S ribosomal RNA
PDKNMLBO_00552 1.1e-133 S UPF0126 domain
PDKNMLBO_00553 1.9e-227 ilvE 2.6.1.42 E Amino-transferase class IV
PDKNMLBO_00555 2.6e-73 K Acetyltransferase (GNAT) domain
PDKNMLBO_00556 3.2e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDKNMLBO_00557 4.1e-92 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDKNMLBO_00558 6.5e-89 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PDKNMLBO_00559 8.5e-195 S alpha beta
PDKNMLBO_00560 1.3e-25 yhjX EGP Major facilitator Superfamily
PDKNMLBO_00561 2.6e-30 EGP Major facilitator Superfamily
PDKNMLBO_00563 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PDKNMLBO_00564 3.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDKNMLBO_00566 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDKNMLBO_00567 3.3e-74 nrdI F Probably involved in ribonucleotide reductase function
PDKNMLBO_00568 1.1e-39 nrdH O Glutaredoxin
PDKNMLBO_00569 5.4e-121 K Bacterial regulatory proteins, tetR family
PDKNMLBO_00570 2.1e-225 G Transmembrane secretion effector
PDKNMLBO_00572 1.9e-269 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_00573 3.5e-258 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PDKNMLBO_00574 1.6e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
PDKNMLBO_00575 1.7e-202 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
PDKNMLBO_00576 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PDKNMLBO_00577 2e-180 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDKNMLBO_00578 4.1e-251 corC S CBS domain
PDKNMLBO_00579 9.4e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDKNMLBO_00580 5.9e-208 phoH T PhoH-like protein
PDKNMLBO_00581 1.8e-56 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
PDKNMLBO_00582 2e-138 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDKNMLBO_00584 3.5e-163 spoU 2.1.1.185 J SpoU rRNA Methylase family
PDKNMLBO_00585 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDKNMLBO_00586 2.7e-108 yitW S Iron-sulfur cluster assembly protein
PDKNMLBO_00587 3.4e-100 iscU C SUF system FeS assembly protein, NifU family
PDKNMLBO_00588 1.9e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDKNMLBO_00589 1e-142 sufC O FeS assembly ATPase SufC
PDKNMLBO_00590 6.1e-235 sufD O FeS assembly protein SufD
PDKNMLBO_00591 1.6e-290 sufB O FeS assembly protein SufB
PDKNMLBO_00592 0.0 S L,D-transpeptidase catalytic domain
PDKNMLBO_00593 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDKNMLBO_00594 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
PDKNMLBO_00595 4.9e-81 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
PDKNMLBO_00596 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PDKNMLBO_00597 3.7e-221 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDKNMLBO_00598 9.3e-57 3.4.23.43 S Type IV leader peptidase family
PDKNMLBO_00599 8.9e-191 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDKNMLBO_00600 2.7e-82 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDKNMLBO_00601 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDKNMLBO_00602 2.5e-36
PDKNMLBO_00603 3.4e-59 WQ51_05790 S Bacterial protein of unknown function (DUF948)
PDKNMLBO_00604 5.6e-129 pgm3 G Phosphoglycerate mutase family
PDKNMLBO_00605 3.4e-51 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PDKNMLBO_00606 3.1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDKNMLBO_00607 1.9e-150 lolD V ABC transporter
PDKNMLBO_00608 4.8e-216 V FtsX-like permease family
PDKNMLBO_00609 1.7e-61 S Domain of unknown function (DUF4418)
PDKNMLBO_00610 0.0 pcrA 3.6.4.12 L DNA helicase
PDKNMLBO_00611 1.5e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDKNMLBO_00612 2.8e-244 pbuX F Permease family
PDKNMLBO_00613 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
PDKNMLBO_00614 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDKNMLBO_00615 5.6e-300 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDKNMLBO_00616 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PDKNMLBO_00617 7.4e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDKNMLBO_00618 1e-148 2.7.7.7 L Domain of unknown function (DUF4357)
PDKNMLBO_00619 5.7e-27
PDKNMLBO_00620 1.4e-256 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDKNMLBO_00622 1.4e-212 ykiI
PDKNMLBO_00623 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PDKNMLBO_00624 7.5e-123 3.6.1.13 L NUDIX domain
PDKNMLBO_00625 7.6e-174 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
PDKNMLBO_00626 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDKNMLBO_00627 9.4e-101 pdtaR T Response regulator receiver domain protein
PDKNMLBO_00628 8.9e-164 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PDKNMLBO_00629 2.3e-184 hbd2 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
PDKNMLBO_00631 1.3e-77 L Phage integrase family
PDKNMLBO_00632 1.2e-59 L Phage integrase family
PDKNMLBO_00633 3e-145 K Transcriptional regulator
PDKNMLBO_00634 6e-39 I PLD-like domain
PDKNMLBO_00635 7.3e-225 S Domain of unknown function (DUF1998)
PDKNMLBO_00636 0.0 L helicase
PDKNMLBO_00637 0.0 V Type II restriction enzyme, methylase
PDKNMLBO_00638 0.0 L SNF2 family N-terminal domain
PDKNMLBO_00639 1.3e-71 S AAA domain
PDKNMLBO_00640 8.5e-108 S AAA domain
PDKNMLBO_00641 1.2e-32 topB 5.99.1.2 L DNA topoisomerase
PDKNMLBO_00642 7.1e-32 topB 5.99.1.2 L DNA topoisomerase
PDKNMLBO_00644 2.3e-273 pyk 2.7.1.40 G Pyruvate kinase
PDKNMLBO_00645 8.8e-176 terC P Integral membrane protein, TerC family
PDKNMLBO_00646 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDKNMLBO_00647 9.1e-116 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDKNMLBO_00648 8.3e-255 rpsA J Ribosomal protein S1
PDKNMLBO_00649 1.9e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDKNMLBO_00650 5.9e-173 P Zinc-uptake complex component A periplasmic
PDKNMLBO_00651 2e-160 znuC P ATPases associated with a variety of cellular activities
PDKNMLBO_00652 2.5e-139 znuB U ABC 3 transport family
PDKNMLBO_00653 7.8e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PDKNMLBO_00654 3e-102 carD K CarD-like/TRCF domain
PDKNMLBO_00655 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDKNMLBO_00656 2e-129 T Response regulator receiver domain protein
PDKNMLBO_00657 6.8e-188 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDKNMLBO_00658 8.5e-139 ctsW S Phosphoribosyl transferase domain
PDKNMLBO_00659 1.1e-152 cof 5.2.1.8 T Eukaryotic phosphomannomutase
PDKNMLBO_00660 1.5e-71 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
PDKNMLBO_00661 4.8e-221
PDKNMLBO_00662 0.0 S Glycosyl transferase, family 2
PDKNMLBO_00663 3.4e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PDKNMLBO_00664 1.7e-199 K Cell envelope-related transcriptional attenuator domain
PDKNMLBO_00666 5.3e-170 K Cell envelope-related transcriptional attenuator domain
PDKNMLBO_00667 0.0 D FtsK/SpoIIIE family
PDKNMLBO_00668 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PDKNMLBO_00669 6e-277 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDKNMLBO_00670 2.7e-144 yplQ S Haemolysin-III related
PDKNMLBO_00671 2.6e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDKNMLBO_00672 1.2e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
PDKNMLBO_00673 1.1e-283 sdaA 4.3.1.17 E Serine dehydratase alpha chain
PDKNMLBO_00674 3.5e-92
PDKNMLBO_00676 1.7e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PDKNMLBO_00677 2e-103 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
PDKNMLBO_00678 2e-71 divIC D Septum formation initiator
PDKNMLBO_00679 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDKNMLBO_00680 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDKNMLBO_00681 8.4e-113 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDKNMLBO_00682 3.3e-103 2.3.1.183 M Acetyltransferase (GNAT) domain
PDKNMLBO_00683 0.0 S Uncharacterised protein family (UPF0182)
PDKNMLBO_00684 1.3e-176 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
PDKNMLBO_00685 6.2e-40 ybdD S Selenoprotein, putative
PDKNMLBO_00686 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
PDKNMLBO_00687 3.2e-53 azlD E Branched-chain amino acid transport protein (AzlD)
PDKNMLBO_00688 6.1e-143 azlC E AzlC protein
PDKNMLBO_00689 1.3e-87 M Protein of unknown function (DUF3737)
PDKNMLBO_00690 1.8e-81 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDKNMLBO_00691 1.2e-310 EGP Major Facilitator Superfamily
PDKNMLBO_00692 7.6e-146 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PDKNMLBO_00693 2.6e-180 opcA G Glucose-6-phosphate dehydrogenase subunit
PDKNMLBO_00694 3.6e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDKNMLBO_00695 3.1e-236 patB 4.4.1.8 E Aminotransferase, class I II
PDKNMLBO_00696 1e-145 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDKNMLBO_00697 1.2e-277 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDKNMLBO_00698 0.0 lysX S Uncharacterised conserved protein (DUF2156)
PDKNMLBO_00699 7.7e-242 S Putative esterase
PDKNMLBO_00700 9.2e-142 ybbL V ATPases associated with a variety of cellular activities
PDKNMLBO_00701 1.8e-134 ybbM V Uncharacterised protein family (UPF0014)
PDKNMLBO_00702 6e-275 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
PDKNMLBO_00703 2.1e-126 S Enoyl-(Acyl carrier protein) reductase
PDKNMLBO_00704 6.4e-227 rutG F Permease family
PDKNMLBO_00705 1.4e-155 3.1.3.73 G Phosphoglycerate mutase family
PDKNMLBO_00706 1.5e-135 K helix_turn_helix, arabinose operon control protein
PDKNMLBO_00707 1.3e-143 S Sulfite exporter TauE/SafE
PDKNMLBO_00708 8.5e-70 S ECF transporter, substrate-specific component
PDKNMLBO_00709 1.1e-78 2.7.1.48 F uridine kinase
PDKNMLBO_00710 7e-159 korD 1.2.7.3 C Domain of unknown function (DUF362)
PDKNMLBO_00711 1.9e-186 C Na H antiporter family protein
PDKNMLBO_00712 1.1e-165 MA20_14895 S Conserved hypothetical protein 698
PDKNMLBO_00713 1e-94
PDKNMLBO_00714 3.7e-16 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PDKNMLBO_00715 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
PDKNMLBO_00716 1e-11
PDKNMLBO_00717 8e-58 yccF S Inner membrane component domain
PDKNMLBO_00718 1.2e-118 K Bacterial regulatory proteins, tetR family
PDKNMLBO_00719 3e-213 G Transmembrane secretion effector
PDKNMLBO_00720 7.8e-16 K addiction module antidote protein HigA
PDKNMLBO_00721 1.4e-239 S HipA-like C-terminal domain
PDKNMLBO_00722 3.9e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDKNMLBO_00723 7.7e-138 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDKNMLBO_00724 2.1e-268 pip 3.4.11.5 S alpha/beta hydrolase fold
PDKNMLBO_00725 0.0 tcsS2 T Histidine kinase
PDKNMLBO_00726 1.4e-125 K helix_turn_helix, Lux Regulon
PDKNMLBO_00727 0.0 MV MacB-like periplasmic core domain
PDKNMLBO_00728 1.5e-141 V ABC transporter, ATP-binding protein
PDKNMLBO_00729 1.8e-192 K helix_turn_helix ASNC type
PDKNMLBO_00730 6.9e-150 P Cobalt transport protein
PDKNMLBO_00731 1.8e-303 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
PDKNMLBO_00732 5.6e-95 XK27_01265 S ECF-type riboflavin transporter, S component
PDKNMLBO_00733 5.9e-252 metY 2.5.1.49 E Aminotransferase class-V
PDKNMLBO_00734 2.2e-162 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PDKNMLBO_00735 3.1e-83 yraN L Belongs to the UPF0102 family
PDKNMLBO_00736 1e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
PDKNMLBO_00737 2.7e-255 dprA 5.99.1.2 LU DNA recombination-mediator protein A
PDKNMLBO_00738 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
PDKNMLBO_00739 5.2e-178 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
PDKNMLBO_00740 4.8e-117 safC S O-methyltransferase
PDKNMLBO_00741 3.9e-246 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PDKNMLBO_00744 8e-241 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDKNMLBO_00745 8.6e-125 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDKNMLBO_00746 1e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDKNMLBO_00747 0.0 E ABC transporter, substrate-binding protein, family 5
PDKNMLBO_00748 9e-252 EGP Major facilitator Superfamily
PDKNMLBO_00749 1.2e-172 yjfF U Branched-chain amino acid transport system / permease component
PDKNMLBO_00750 1.5e-181 ytfT U Branched-chain amino acid transport system / permease component
PDKNMLBO_00751 6e-288 ytfR 3.6.3.17 G ATPases associated with a variety of cellular activities
PDKNMLBO_00752 6.4e-166 G Periplasmic binding protein domain
PDKNMLBO_00753 0.0 lpqB S Lipoprotein LpqB beta-propeller domain
PDKNMLBO_00754 4.4e-286 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PDKNMLBO_00755 1.4e-133 KT Transcriptional regulatory protein, C terminal
PDKNMLBO_00756 3.4e-250 rarA L Recombination factor protein RarA
PDKNMLBO_00757 0.0 L DEAD DEAH box helicase
PDKNMLBO_00758 4.3e-191 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
PDKNMLBO_00759 1e-199 gluD E Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00760 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00761 3.1e-153 gluB ET Belongs to the bacterial solute-binding protein 3 family
PDKNMLBO_00762 9.8e-144 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
PDKNMLBO_00763 3.3e-138 glnQ 3.6.3.21 E ATPases associated with a variety of cellular activities
PDKNMLBO_00764 5.7e-217 glnP E Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00765 4.2e-50 glnP E Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00766 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PDKNMLBO_00767 9e-251 hisS 6.1.1.21 J Histidyl-tRNA synthetase
PDKNMLBO_00768 3.3e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
PDKNMLBO_00769 1.3e-139 3.5.2.10 S Creatinine amidohydrolase
PDKNMLBO_00770 2.2e-246 proP EGP Sugar (and other) transporter
PDKNMLBO_00771 1.6e-285 purR QT Purine catabolism regulatory protein-like family
PDKNMLBO_00772 1.3e-254 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
PDKNMLBO_00773 0.0 clpC O ATPase family associated with various cellular activities (AAA)
PDKNMLBO_00774 4.6e-188 uspA T Belongs to the universal stress protein A family
PDKNMLBO_00775 1.2e-182 S Protein of unknown function (DUF3027)
PDKNMLBO_00776 4.5e-67 cspB K 'Cold-shock' DNA-binding domain
PDKNMLBO_00777 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDKNMLBO_00778 6.8e-133 KT Response regulator receiver domain protein
PDKNMLBO_00779 1.3e-124
PDKNMLBO_00781 8.7e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDKNMLBO_00782 8.5e-77 S LytR cell envelope-related transcriptional attenuator
PDKNMLBO_00783 4.4e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDKNMLBO_00784 3.4e-181 moxR S ATPase family associated with various cellular activities (AAA)
PDKNMLBO_00785 4.2e-175 S Protein of unknown function DUF58
PDKNMLBO_00786 3.6e-91
PDKNMLBO_00787 1.6e-191 S von Willebrand factor (vWF) type A domain
PDKNMLBO_00788 5e-182 S von Willebrand factor (vWF) type A domain
PDKNMLBO_00789 1.3e-62
PDKNMLBO_00790 2.7e-277 S PGAP1-like protein
PDKNMLBO_00791 1.5e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
PDKNMLBO_00792 0.0 S Lysylphosphatidylglycerol synthase TM region
PDKNMLBO_00793 1.4e-41 hup L Belongs to the bacterial histone-like protein family
PDKNMLBO_00794 1.8e-57
PDKNMLBO_00795 9.7e-141 C FMN binding
PDKNMLBO_00796 2.6e-280 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PDKNMLBO_00797 8.9e-24 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
PDKNMLBO_00798 3.3e-160 hisN 3.1.3.25 G Inositol monophosphatase family
PDKNMLBO_00799 3.4e-302 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
PDKNMLBO_00800 1.1e-281 arc O AAA ATPase forming ring-shaped complexes
PDKNMLBO_00801 3.5e-123 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
PDKNMLBO_00802 1.1e-178 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDKNMLBO_00803 2.7e-134 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDKNMLBO_00804 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDKNMLBO_00805 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDKNMLBO_00806 1.4e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDKNMLBO_00807 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
PDKNMLBO_00809 4.4e-106 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PDKNMLBO_00810 3.7e-171 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PDKNMLBO_00811 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PDKNMLBO_00812 1.1e-239 carA 6.3.5.5 F Belongs to the CarA family
PDKNMLBO_00813 1.8e-75 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDKNMLBO_00814 2e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDKNMLBO_00815 9.5e-233 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDKNMLBO_00816 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDKNMLBO_00817 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDKNMLBO_00818 1.2e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDKNMLBO_00820 8.1e-188 yocS S SBF-like CPA transporter family (DUF4137)
PDKNMLBO_00822 2.9e-198 ltaE 4.1.2.48 E Beta-eliminating lyase
PDKNMLBO_00823 6.5e-226 M Glycosyl transferase 4-like domain
PDKNMLBO_00824 4.8e-227 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDKNMLBO_00825 1.2e-137 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PDKNMLBO_00826 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
PDKNMLBO_00827 4.2e-38
PDKNMLBO_00828 3.6e-33
PDKNMLBO_00830 1.1e-61 S Protein of unknown function (DUF4230)
PDKNMLBO_00831 7e-204 S Short C-terminal domain
PDKNMLBO_00832 2.5e-35
PDKNMLBO_00833 2.2e-41 S Domain of unknown function (DUF4839)
PDKNMLBO_00834 1.1e-12
PDKNMLBO_00836 1.3e-119 2.7.1.196, 2.7.1.205 K sequence-specific DNA binding
PDKNMLBO_00837 1.2e-24
PDKNMLBO_00838 1.1e-257 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
PDKNMLBO_00839 6.7e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDKNMLBO_00840 8.3e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PDKNMLBO_00841 1.5e-233 purD 6.3.4.13 F Belongs to the GARS family
PDKNMLBO_00842 1.6e-247 EGP Major facilitator Superfamily
PDKNMLBO_00843 1.1e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PDKNMLBO_00844 1.1e-214 1.1.1.1 C Iron-containing alcohol dehydrogenase
PDKNMLBO_00845 3.3e-129 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PDKNMLBO_00846 9.1e-189 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
PDKNMLBO_00847 2.5e-203 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
PDKNMLBO_00848 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PDKNMLBO_00849 2.3e-89 zur P Belongs to the Fur family
PDKNMLBO_00850 1.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDKNMLBO_00851 1.1e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDKNMLBO_00852 1.2e-183 adh3 C Zinc-binding dehydrogenase
PDKNMLBO_00853 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDKNMLBO_00854 2.6e-256 macB_8 V MacB-like periplasmic core domain
PDKNMLBO_00855 4.4e-147 M Conserved repeat domain
PDKNMLBO_00856 9.6e-135 V ATPases associated with a variety of cellular activities
PDKNMLBO_00857 4.3e-75
PDKNMLBO_00858 2.4e-15 S Domain of unknown function (DUF4143)
PDKNMLBO_00859 3.1e-127 XK27_08050 O prohibitin homologues
PDKNMLBO_00860 1.4e-43 XAC3035 O Glutaredoxin
PDKNMLBO_00861 2.8e-15 P Belongs to the ABC transporter superfamily
PDKNMLBO_00862 3.2e-75 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PDKNMLBO_00863 3.3e-13 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PDKNMLBO_00864 2.4e-220 mtnE 2.6.1.83 E Aminotransferase class I and II
PDKNMLBO_00865 4.9e-98 metI P Psort location CytoplasmicMembrane, score 9.99
PDKNMLBO_00866 6.1e-191 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDKNMLBO_00867 2e-155 metQ M NLPA lipoprotein
PDKNMLBO_00868 1.4e-200 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDKNMLBO_00869 9e-143 cjaA ET Bacterial periplasmic substrate-binding proteins
PDKNMLBO_00870 8.3e-151 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
PDKNMLBO_00871 3.6e-120 E Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00872 1.1e-108 papP E Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00873 5.1e-113 K acetyltransferase
PDKNMLBO_00877 0.0 tetP J Elongation factor G, domain IV
PDKNMLBO_00879 4e-215 ybiR P Citrate transporter
PDKNMLBO_00880 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDKNMLBO_00881 2e-307 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDKNMLBO_00882 4e-270 yhdG E aromatic amino acid transport protein AroP K03293
PDKNMLBO_00883 2.7e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDKNMLBO_00884 3.9e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDKNMLBO_00885 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDKNMLBO_00886 0.0 macB_2 V ATPases associated with a variety of cellular activities
PDKNMLBO_00887 1e-218 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PDKNMLBO_00888 9.9e-191 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
PDKNMLBO_00889 1e-139 sapF E ATPases associated with a variety of cellular activities
PDKNMLBO_00890 4.6e-135 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
PDKNMLBO_00891 1.2e-139 EP Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00892 4.8e-166 P Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00893 1.1e-292 E ABC transporter, substrate-binding protein, family 5
PDKNMLBO_00894 1.6e-241 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDKNMLBO_00895 8.5e-142 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PDKNMLBO_00896 2.7e-81 S SnoaL-like domain
PDKNMLBO_00897 1.2e-143 T His Kinase A (phosphoacceptor) domain
PDKNMLBO_00898 7.6e-91 K Transcriptional regulatory protein, C terminal
PDKNMLBO_00899 3.1e-275 G Bacterial extracellular solute-binding protein
PDKNMLBO_00900 2.2e-246 G Bacterial extracellular solute-binding protein
PDKNMLBO_00901 2.2e-311 abfA1 3.2.1.55 GH51 G arabinose metabolic process
PDKNMLBO_00902 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PDKNMLBO_00903 9.1e-168 G ABC transporter permease
PDKNMLBO_00904 3.3e-147 G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00905 3.8e-29 L transposase activity
PDKNMLBO_00906 9.3e-108 L Transposase and inactivated derivatives
PDKNMLBO_00907 1.4e-189 K Periplasmic binding protein domain
PDKNMLBO_00908 5.3e-229 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PDKNMLBO_00909 1.3e-142 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
PDKNMLBO_00910 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDKNMLBO_00911 8.5e-145 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
PDKNMLBO_00912 3.9e-131 yecS E Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00913 3.2e-151 pknD ET ABC transporter, substrate-binding protein, family 3
PDKNMLBO_00914 7.2e-151 pknD ET ABC transporter, substrate-binding protein, family 3
PDKNMLBO_00915 1.1e-156 pknD ET ABC transporter, substrate-binding protein, family 3
PDKNMLBO_00916 2e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDKNMLBO_00917 2.9e-148 usp 3.5.1.28 CBM50 D CHAP domain protein
PDKNMLBO_00918 3.4e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
PDKNMLBO_00919 2.3e-168 ftsE D Cell division ATP-binding protein FtsE
PDKNMLBO_00920 1.1e-190 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDKNMLBO_00921 4e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDKNMLBO_00922 1.7e-142 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PDKNMLBO_00923 5.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
PDKNMLBO_00924 1.6e-151 map 3.4.11.18 E Methionine aminopeptidase
PDKNMLBO_00925 0.0 pepO 3.4.24.71 O Peptidase family M13
PDKNMLBO_00926 1.4e-98 L Single-strand binding protein family
PDKNMLBO_00927 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDKNMLBO_00928 7.9e-271 recD2 3.6.4.12 L PIF1-like helicase
PDKNMLBO_00929 4.5e-163 supH S Sucrose-6F-phosphate phosphohydrolase
PDKNMLBO_00930 8.2e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PDKNMLBO_00931 2.7e-288 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PDKNMLBO_00932 4.5e-195 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
PDKNMLBO_00933 4.2e-113 ywlC 2.7.7.87 J Belongs to the SUA5 family
PDKNMLBO_00934 1.9e-124 livF E ATPases associated with a variety of cellular activities
PDKNMLBO_00935 4.8e-151 E Branched-chain amino acid ATP-binding cassette transporter
PDKNMLBO_00936 6.7e-196 livM U Belongs to the binding-protein-dependent transport system permease family
PDKNMLBO_00937 9.5e-156 U Belongs to the binding-protein-dependent transport system permease family
PDKNMLBO_00938 2.7e-219 livK E Receptor family ligand binding region
PDKNMLBO_00939 9.4e-172 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDKNMLBO_00940 1.4e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDKNMLBO_00941 1.5e-35 rpmE J Binds the 23S rRNA
PDKNMLBO_00943 6.8e-226 xylR GK ROK family
PDKNMLBO_00944 6.1e-285 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
PDKNMLBO_00945 2.8e-106 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
PDKNMLBO_00946 9.7e-09 CE10 I Belongs to the type-B carboxylesterase lipase family
PDKNMLBO_00947 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
PDKNMLBO_00948 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
PDKNMLBO_00949 7e-164 MA20_14020 P Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00950 3.4e-186 MA20_14025 U Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00951 2.4e-242 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
PDKNMLBO_00952 8.2e-185 K Bacterial regulatory proteins, lacI family
PDKNMLBO_00953 0.0 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
PDKNMLBO_00954 4.3e-266 xylA 5.3.1.5 G Belongs to the xylose isomerase family
PDKNMLBO_00955 4.5e-249 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
PDKNMLBO_00956 7e-278 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PDKNMLBO_00957 3.4e-107 S Membrane
PDKNMLBO_00958 8.7e-51 ydcZ S Putative inner membrane exporter, YdcZ
PDKNMLBO_00959 3.1e-23 ydcZ S Putative inner membrane exporter, YdcZ
PDKNMLBO_00960 1.6e-87 ykoE S ABC-type cobalt transport system, permease component
PDKNMLBO_00961 4.7e-227 xylR GK ROK family
PDKNMLBO_00962 3.4e-291 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
PDKNMLBO_00963 2.1e-168 F Inosine-uridine preferring nucleoside hydrolase
PDKNMLBO_00964 4.1e-214 bdhA C Iron-containing alcohol dehydrogenase
PDKNMLBO_00965 8.6e-09 bdhA C Iron-containing alcohol dehydrogenase
PDKNMLBO_00966 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
PDKNMLBO_00967 1.5e-235 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PDKNMLBO_00968 0.0 O Highly conserved protein containing a thioredoxin domain
PDKNMLBO_00969 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
PDKNMLBO_00970 0.0 G Psort location Cytoplasmic, score 8.87
PDKNMLBO_00971 4.3e-150 G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00972 2.1e-174 U Binding-protein-dependent transport system inner membrane component
PDKNMLBO_00973 5.1e-256 G ABC transporter periplasmic binding protein YcjN precursor K02027
PDKNMLBO_00974 4e-86 ribD 1.1.1.193, 3.5.4.26 H Cytidine and deoxycytidylate deaminase zinc-binding region
PDKNMLBO_00975 9.3e-74 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDKNMLBO_00976 5.9e-182 V Beta-lactamase
PDKNMLBO_00977 0.0 yjjK S ATP-binding cassette protein, ChvD family
PDKNMLBO_00978 5e-165 tesB I Thioesterase-like superfamily
PDKNMLBO_00979 3.1e-93 S Protein of unknown function (DUF3180)
PDKNMLBO_00980 4.1e-273 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDKNMLBO_00981 9e-156 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PDKNMLBO_00982 9.6e-115 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
PDKNMLBO_00983 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDKNMLBO_00984 3.9e-99 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDKNMLBO_00985 1.5e-200 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDKNMLBO_00986 1.3e-231 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
PDKNMLBO_00987 6.3e-232 epsG M Glycosyl transferase family 21
PDKNMLBO_00988 1.3e-237 S AI-2E family transporter
PDKNMLBO_00989 5.5e-180 3.4.14.13 M Glycosyltransferase like family 2
PDKNMLBO_00990 1.8e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
PDKNMLBO_00991 0.0 yliE T Putative diguanylate phosphodiesterase
PDKNMLBO_00992 2.2e-111 S Domain of unknown function (DUF4956)
PDKNMLBO_00993 1.4e-158 P VTC domain
PDKNMLBO_00994 2.5e-309 cotH M CotH kinase protein
PDKNMLBO_00995 1.1e-284 pelG S Putative exopolysaccharide Exporter (EPS-E)
PDKNMLBO_00996 4.6e-282 pelF GT4 M Domain of unknown function (DUF3492)
PDKNMLBO_00997 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
PDKNMLBO_00998 8.5e-149
PDKNMLBO_00999 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
PDKNMLBO_01003 3.8e-162 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDKNMLBO_01004 3.8e-198 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDKNMLBO_01006 3.6e-85 ptpA 3.1.3.48 T low molecular weight
PDKNMLBO_01007 6.4e-130 folA 1.5.1.3 H dihydrofolate reductase
PDKNMLBO_01008 3.8e-181 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDKNMLBO_01009 7.7e-73 attW O OsmC-like protein
PDKNMLBO_01010 1.3e-190 T Universal stress protein family
PDKNMLBO_01011 1.3e-79 M NlpC/P60 family
PDKNMLBO_01012 1.6e-166 usp 3.5.1.28 CBM50 S CHAP domain
PDKNMLBO_01013 8.2e-218 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDKNMLBO_01014 6.2e-41
PDKNMLBO_01015 9.8e-214 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDKNMLBO_01016 3.9e-106 phoU P Plays a role in the regulation of phosphate uptake
PDKNMLBO_01017 0.0 4.2.1.53 S MCRA family
PDKNMLBO_01018 2.9e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDKNMLBO_01019 3.5e-205 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PDKNMLBO_01020 2.4e-99 S Serine aminopeptidase, S33
PDKNMLBO_01021 7.4e-250 G Psort location CytoplasmicMembrane, score 10.00
PDKNMLBO_01022 9.3e-192 K helix_turn _helix lactose operon repressor
PDKNMLBO_01023 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDKNMLBO_01025 7e-212 araJ EGP Major facilitator Superfamily
PDKNMLBO_01026 0.0 S Domain of unknown function (DUF4037)
PDKNMLBO_01027 6.7e-116 S Protein of unknown function (DUF4125)
PDKNMLBO_01028 1e-91
PDKNMLBO_01029 1.2e-147 pspC KT PspC domain
PDKNMLBO_01030 6.7e-274 tcsS3 KT PspC domain
PDKNMLBO_01031 5.6e-121 degU K helix_turn_helix, Lux Regulon
PDKNMLBO_01032 2.3e-139 yidP K UTRA
PDKNMLBO_01033 5.3e-264 gabT 2.6.1.19, 2.6.1.22 H Aminotransferase class-III
PDKNMLBO_01034 2.5e-275 eat E Amino acid permease
PDKNMLBO_01035 1.5e-213 S Choline/ethanolamine kinase
PDKNMLBO_01036 4.3e-103 Q Isochorismatase family
PDKNMLBO_01037 2e-269 U Permease for cytosine/purines, uracil, thiamine, allantoin
PDKNMLBO_01038 8.3e-190 yegV G pfkB family carbohydrate kinase
PDKNMLBO_01039 4.6e-188 yegU O ADP-ribosylglycohydrolase
PDKNMLBO_01041 1.2e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDKNMLBO_01042 9.8e-200 I Diacylglycerol kinase catalytic domain
PDKNMLBO_01043 2.8e-157 arbG K CAT RNA binding domain
PDKNMLBO_01044 0.0 crr G pts system, glucose-specific IIABC component
PDKNMLBO_01045 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PDKNMLBO_01046 2.8e-151 T LytTr DNA-binding domain
PDKNMLBO_01047 5.7e-250 T GHKL domain
PDKNMLBO_01048 2.7e-214 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDKNMLBO_01049 2.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDKNMLBO_01051 1.1e-107
PDKNMLBO_01052 1.6e-250 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDKNMLBO_01053 5.2e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
PDKNMLBO_01054 4.7e-186 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDKNMLBO_01055 2.2e-69 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDKNMLBO_01056 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDKNMLBO_01057 6.1e-191 nusA K Participates in both transcription termination and antitermination
PDKNMLBO_01058 4.4e-78
PDKNMLBO_01060 1.5e-45 E Transglutaminase/protease-like homologues
PDKNMLBO_01061 8.1e-43 gcs2 S A circularly permuted ATPgrasp
PDKNMLBO_01062 1.2e-183 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDKNMLBO_01063 1.3e-66 rplQ J Ribosomal protein L17
PDKNMLBO_01064 4.7e-185 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDKNMLBO_01065 1.9e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDKNMLBO_01066 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDKNMLBO_01067 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PDKNMLBO_01068 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDKNMLBO_01069 5.5e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDKNMLBO_01070 3.8e-238 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDKNMLBO_01071 9.8e-74 rplO J binds to the 23S rRNA
PDKNMLBO_01072 3.4e-25 rpmD J Ribosomal protein L30p/L7e
PDKNMLBO_01073 1.2e-92 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDKNMLBO_01074 3.3e-59 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDKNMLBO_01075 3.8e-96 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDKNMLBO_01076 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDKNMLBO_01077 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDKNMLBO_01078 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDKNMLBO_01079 8.7e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDKNMLBO_01080 3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDKNMLBO_01081 4.9e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDKNMLBO_01082 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
PDKNMLBO_01083 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDKNMLBO_01084 1e-97 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDKNMLBO_01085 1.9e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDKNMLBO_01086 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDKNMLBO_01087 6.1e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDKNMLBO_01088 6.8e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDKNMLBO_01089 1.4e-116 rplD J Forms part of the polypeptide exit tunnel
PDKNMLBO_01090 2.3e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDKNMLBO_01091 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
PDKNMLBO_01092 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDKNMLBO_01093 7.3e-183 rhaR_1 K helix_turn_helix, arabinose operon control protein
PDKNMLBO_01094 6.2e-196 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
PDKNMLBO_01095 4.2e-239 EGP Major facilitator Superfamily
PDKNMLBO_01096 1.3e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PDKNMLBO_01097 1.4e-76 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDKNMLBO_01098 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PDKNMLBO_01099 3.4e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
PDKNMLBO_01100 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDKNMLBO_01101 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PDKNMLBO_01102 6.9e-122
PDKNMLBO_01103 1.4e-113 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
PDKNMLBO_01104 3.6e-185 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDKNMLBO_01105 1e-251 M Bacterial capsule synthesis protein PGA_cap
PDKNMLBO_01106 4.7e-223 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDKNMLBO_01108 1.1e-296 CE10 I Belongs to the type-B carboxylesterase lipase family
PDKNMLBO_01109 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
PDKNMLBO_01110 2e-232 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PDKNMLBO_01111 0.0 G Psort location Cytoplasmic, score 8.87
PDKNMLBO_01112 1e-36 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
PDKNMLBO_01113 1.6e-205 dapC E Aminotransferase class I and II
PDKNMLBO_01114 8.3e-59 fdxA C 4Fe-4S binding domain
PDKNMLBO_01115 1.3e-266 E aromatic amino acid transport protein AroP K03293
PDKNMLBO_01116 1.2e-203 murB 1.3.1.98 M Cell wall formation
PDKNMLBO_01117 5.5e-25 rpmG J Ribosomal protein L33
PDKNMLBO_01121 2.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDKNMLBO_01122 4.7e-147
PDKNMLBO_01123 1.1e-121 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
PDKNMLBO_01124 3.1e-100 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
PDKNMLBO_01125 6.1e-30 fmdB S Putative regulatory protein
PDKNMLBO_01126 1.1e-92 flgA NO SAF
PDKNMLBO_01127 2.4e-35
PDKNMLBO_01128 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
PDKNMLBO_01129 1.9e-176 T Forkhead associated domain
PDKNMLBO_01130 2.4e-36 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDKNMLBO_01131 1.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDKNMLBO_01132 1.3e-246 pbuO S Permease family
PDKNMLBO_01133 3.6e-144 P Zinc-uptake complex component A periplasmic
PDKNMLBO_01134 3e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDKNMLBO_01135 7.5e-167 pstA P Phosphate transport system permease
PDKNMLBO_01136 3.7e-163 pstC P probably responsible for the translocation of the substrate across the membrane
PDKNMLBO_01137 1.6e-197 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
PDKNMLBO_01138 3.4e-129 KT Transcriptional regulatory protein, C terminal
PDKNMLBO_01139 2.8e-220 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PDKNMLBO_01140 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDKNMLBO_01141 2.8e-221 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PDKNMLBO_01142 3.3e-211 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PDKNMLBO_01143 1.5e-266 pepC 3.4.22.40 E Peptidase C1-like family
PDKNMLBO_01144 1.7e-50 D nuclear chromosome segregation
PDKNMLBO_01145 3.4e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PDKNMLBO_01146 5.5e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PDKNMLBO_01147 4.1e-184 yfiH Q Multi-copper polyphenol oxidoreductase laccase
PDKNMLBO_01148 7e-297 yegQ O Peptidase family U32 C-terminal domain
PDKNMLBO_01149 9.7e-171 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
PDKNMLBO_01150 0.0 S Predicted membrane protein (DUF2207)
PDKNMLBO_01151 1.7e-91 lemA S LemA family
PDKNMLBO_01152 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PDKNMLBO_01153 1.7e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDKNMLBO_01154 5.4e-116
PDKNMLBO_01156 0.0 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
PDKNMLBO_01157 1.2e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDKNMLBO_01158 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
PDKNMLBO_01159 0.0 pccB I Carboxyl transferase domain
PDKNMLBO_01160 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PDKNMLBO_01161 2.1e-79 bioY S BioY family
PDKNMLBO_01162 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
PDKNMLBO_01163 0.0
PDKNMLBO_01164 5.9e-143 QT PucR C-terminal helix-turn-helix domain
PDKNMLBO_01165 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDKNMLBO_01166 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDKNMLBO_01167 4.2e-128 nusG K Participates in transcription elongation, termination and antitermination
PDKNMLBO_01168 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDKNMLBO_01170 7.4e-233 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
PDKNMLBO_01171 1e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDKNMLBO_01172 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDKNMLBO_01173 2.6e-39 rpmA J Ribosomal L27 protein
PDKNMLBO_01174 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDKNMLBO_01175 1.5e-308 rne 3.1.26.12 J Ribonuclease E/G family
PDKNMLBO_01176 9.9e-230 dapE 3.5.1.18 E Peptidase dimerisation domain
PDKNMLBO_01177 2.7e-166 mdcF S Transporter, auxin efflux carrier (AEC) family protein
PDKNMLBO_01178 1.6e-269 V Efflux ABC transporter, permease protein
PDKNMLBO_01179 1.1e-127 V ATPases associated with a variety of cellular activities
PDKNMLBO_01180 2.1e-137 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDKNMLBO_01181 2.6e-123 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDKNMLBO_01182 3e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDKNMLBO_01183 0.0 pgi 5.3.1.9 G Belongs to the GPI family
PDKNMLBO_01184 7.9e-180 S Auxin Efflux Carrier
PDKNMLBO_01187 1.8e-221 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
PDKNMLBO_01188 2.4e-218 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
PDKNMLBO_01189 1.5e-250 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDKNMLBO_01190 1e-139 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PDKNMLBO_01191 1.2e-120 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDKNMLBO_01192 3.2e-77 soxR K MerR, DNA binding
PDKNMLBO_01193 3.9e-195 yghZ C Aldo/keto reductase family
PDKNMLBO_01194 3.2e-58 S Protein of unknown function (DUF3039)
PDKNMLBO_01195 7.7e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDKNMLBO_01196 8.5e-134
PDKNMLBO_01197 1.8e-113 yceD S Uncharacterized ACR, COG1399
PDKNMLBO_01198 1e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PDKNMLBO_01199 5.7e-136 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDKNMLBO_01200 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
PDKNMLBO_01201 5.7e-92 ilvN 2.2.1.6 E ACT domain
PDKNMLBO_01202 7.6e-97
PDKNMLBO_01203 0.0 yjjK S ABC transporter
PDKNMLBO_01204 1.1e-152 guaA1 6.3.5.2 F Peptidase C26
PDKNMLBO_01205 2.5e-295 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDKNMLBO_01206 2.7e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDKNMLBO_01207 3.7e-177 S Endonuclease/Exonuclease/phosphatase family
PDKNMLBO_01208 3.9e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDKNMLBO_01209 1.8e-34 CP_0960 S Belongs to the UPF0109 family
PDKNMLBO_01210 3.7e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDKNMLBO_01211 2e-147 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDKNMLBO_01212 2.1e-148 I alpha/beta hydrolase fold
PDKNMLBO_01213 3.2e-138 uhpT EGP Major facilitator Superfamily
PDKNMLBO_01214 1.5e-90 K helix_turn_helix, arabinose operon control protein
PDKNMLBO_01215 2.4e-91 rsmD 2.1.1.171 L Conserved hypothetical protein 95
PDKNMLBO_01216 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
PDKNMLBO_01217 8.4e-30 rpmB J Ribosomal L28 family
PDKNMLBO_01218 0.0 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_01219 4.9e-230 yxiO S Vacuole effluxer Atg22 like
PDKNMLBO_01220 1.9e-127 gntR K FCD
PDKNMLBO_01221 2.8e-83 gntK 2.7.1.12 F Shikimate kinase
PDKNMLBO_01222 6e-228 gnuT EG GntP family permease
PDKNMLBO_01223 5.2e-167 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase, C-terminal domain
PDKNMLBO_01224 1.2e-230 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
PDKNMLBO_01225 9.7e-121 K Bacterial regulatory proteins, tetR family
PDKNMLBO_01226 7.8e-227 MA20_36090 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_01227 1.1e-228 MA20_36090 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_01228 1.7e-137 M Mechanosensitive ion channel
PDKNMLBO_01229 4.8e-178 S CAAX protease self-immunity
PDKNMLBO_01230 2.6e-214 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDKNMLBO_01231 2.1e-141 U Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01232 2.7e-158 U Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01233 2.2e-218 P Bacterial extracellular solute-binding protein
PDKNMLBO_01234 9.8e-219 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDKNMLBO_01235 1.7e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PDKNMLBO_01236 5.5e-177 plsC2 2.3.1.51 I Phosphate acyltransferases
PDKNMLBO_01237 1e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDKNMLBO_01238 3.6e-200 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
PDKNMLBO_01239 1.3e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDKNMLBO_01240 7.1e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDKNMLBO_01241 1.1e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
PDKNMLBO_01242 3e-268 S Calcineurin-like phosphoesterase
PDKNMLBO_01245 5.5e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDKNMLBO_01246 1.8e-99 S Protein of unknown function (DUF805)
PDKNMLBO_01247 7e-184
PDKNMLBO_01248 1.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
PDKNMLBO_01249 6.1e-263 EGP Major facilitator Superfamily
PDKNMLBO_01250 7.1e-95 S GtrA-like protein
PDKNMLBO_01251 6.7e-62 S Macrophage migration inhibitory factor (MIF)
PDKNMLBO_01252 4.5e-288 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
PDKNMLBO_01253 0.0 pepD E Peptidase family C69
PDKNMLBO_01254 1.1e-106 S Phosphatidylethanolamine-binding protein
PDKNMLBO_01255 4.6e-286 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDKNMLBO_01256 6e-39 ptsH G PTS HPr component phosphorylation site
PDKNMLBO_01257 1.7e-182 K helix_turn _helix lactose operon repressor
PDKNMLBO_01258 4.2e-193 holB 2.7.7.7 L DNA polymerase III
PDKNMLBO_01259 4.1e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDKNMLBO_01260 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDKNMLBO_01261 8.1e-191 3.6.1.27 I PAP2 superfamily
PDKNMLBO_01262 2.2e-234 glf 5.4.99.9 M UDP-galactopyranose mutase
PDKNMLBO_01263 2.7e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
PDKNMLBO_01264 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PDKNMLBO_01266 0.0 S Beta-L-arabinofuranosidase, GH127
PDKNMLBO_01267 1.9e-156 U Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01268 9.1e-170 G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01269 4.8e-246 G Bacterial extracellular solute-binding protein
PDKNMLBO_01270 2.3e-203 abf G Glycosyl hydrolases family 43
PDKNMLBO_01271 2.4e-195 K helix_turn _helix lactose operon repressor
PDKNMLBO_01272 0.0 3.2.1.97 GH101 G Glycosyl hydrolases family 43
PDKNMLBO_01273 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
PDKNMLBO_01274 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
PDKNMLBO_01275 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PDKNMLBO_01276 3.2e-300 S Calcineurin-like phosphoesterase
PDKNMLBO_01277 2.4e-115
PDKNMLBO_01278 9.4e-34 2.7.13.3 T Histidine kinase
PDKNMLBO_01279 3.1e-45 K helix_turn_helix, Lux Regulon
PDKNMLBO_01280 4.8e-31
PDKNMLBO_01281 9.9e-67
PDKNMLBO_01282 1.8e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDKNMLBO_01283 1.4e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
PDKNMLBO_01284 3.4e-135 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PDKNMLBO_01285 1e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDKNMLBO_01286 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
PDKNMLBO_01287 1.1e-96 K Bacterial regulatory proteins, tetR family
PDKNMLBO_01288 3.5e-193 S Psort location CytoplasmicMembrane, score
PDKNMLBO_01289 1.9e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
PDKNMLBO_01290 4.7e-56 S TIGRFAM helicase secretion neighborhood TadE-like protein
PDKNMLBO_01291 5.1e-60 U TadE-like protein
PDKNMLBO_01292 1.3e-42 S Protein of unknown function (DUF4244)
PDKNMLBO_01293 5.3e-87 gspF NU Type II secretion system (T2SS), protein F
PDKNMLBO_01294 5.3e-125 U Type ii secretion system
PDKNMLBO_01295 5.2e-184 cpaF U Type II IV secretion system protein
PDKNMLBO_01296 5.5e-141 cpaE D bacterial-type flagellum organization
PDKNMLBO_01298 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDKNMLBO_01299 1e-223 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
PDKNMLBO_01300 3.9e-91
PDKNMLBO_01301 2.7e-117 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDKNMLBO_01302 2.1e-207 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PDKNMLBO_01303 0.0 G Bacterial Ig-like domain (group 4)
PDKNMLBO_01304 0.0 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
PDKNMLBO_01305 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
PDKNMLBO_01306 9.3e-147 G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01307 3.1e-167 P Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01308 4.3e-07 P Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01309 1.1e-242 G Bacterial extracellular solute-binding protein
PDKNMLBO_01310 4.1e-192 K Periplasmic binding protein domain
PDKNMLBO_01311 0.0 ubiB S ABC1 family
PDKNMLBO_01312 1e-27 S granule-associated protein
PDKNMLBO_01313 3.6e-137 cobQ S CobB/CobQ-like glutamine amidotransferase domain
PDKNMLBO_01314 3e-252 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
PDKNMLBO_01315 3.3e-248 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDKNMLBO_01316 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
PDKNMLBO_01317 1e-54 glnB K Nitrogen regulatory protein P-II
PDKNMLBO_01318 1.2e-236 amt U Ammonium Transporter Family
PDKNMLBO_01319 8.6e-168 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDKNMLBO_01321 4.9e-108 icaR K Bacterial regulatory proteins, tetR family
PDKNMLBO_01323 4e-195 XK27_01805 M Glycosyltransferase like family 2
PDKNMLBO_01324 3.4e-305 pepD E Peptidase family C69
PDKNMLBO_01326 1.3e-30
PDKNMLBO_01327 1.9e-87
PDKNMLBO_01328 3.8e-17 L Psort location Cytoplasmic, score 8.87
PDKNMLBO_01329 9e-152 V Abi-like protein
PDKNMLBO_01330 3.7e-55 yccF S Inner membrane component domain
PDKNMLBO_01331 0.0 3.2.1.177 GH31 G Belongs to the glycosyl hydrolase 31 family
PDKNMLBO_01332 2.5e-144 G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01333 4.7e-163 G PFAM binding-protein-dependent transport systems inner membrane component
PDKNMLBO_01334 3e-223 G Bacterial extracellular solute-binding protein
PDKNMLBO_01335 2.4e-181 K helix_turn _helix lactose operon repressor
PDKNMLBO_01336 1.4e-184 K Psort location Cytoplasmic, score
PDKNMLBO_01337 2.5e-269 G Bacterial extracellular solute-binding protein
PDKNMLBO_01338 1.7e-162 P Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01339 6.5e-148 P Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01340 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PDKNMLBO_01341 7.2e-246 wcoI DM Psort location CytoplasmicMembrane, score
PDKNMLBO_01342 2.6e-97 3.1.3.48 T Low molecular weight phosphatase family
PDKNMLBO_01343 2.4e-76
PDKNMLBO_01344 1.6e-28 K Cro/C1-type HTH DNA-binding domain
PDKNMLBO_01345 1.1e-71
PDKNMLBO_01346 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
PDKNMLBO_01347 1.8e-158 cps1D M Domain of unknown function (DUF4422)
PDKNMLBO_01348 1.1e-189 2.4.1.166 GT2 M Glycosyltransferase like family 2
PDKNMLBO_01349 3.9e-254 S Psort location CytoplasmicMembrane, score 9.99
PDKNMLBO_01350 1.5e-286 S Psort location CytoplasmicMembrane, score 9.99
PDKNMLBO_01351 4e-206 wbbI M transferase activity, transferring glycosyl groups
PDKNMLBO_01352 1.9e-192 1.13.11.79 C Psort location Cytoplasmic, score 8.87
PDKNMLBO_01353 5.5e-211 GT2 M Glycosyltransferase like family 2
PDKNMLBO_01354 1.2e-221 C Polysaccharide pyruvyl transferase
PDKNMLBO_01355 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
PDKNMLBO_01356 2.1e-88
PDKNMLBO_01357 5.6e-170 S G5
PDKNMLBO_01358 3.9e-60 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
PDKNMLBO_01359 1.3e-113 F Domain of unknown function (DUF4916)
PDKNMLBO_01360 3.4e-160 mhpC I Alpha/beta hydrolase family
PDKNMLBO_01361 8.7e-209 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PDKNMLBO_01362 1e-69 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PDKNMLBO_01363 1.5e-236 S Uncharacterized conserved protein (DUF2183)
PDKNMLBO_01364 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
PDKNMLBO_01365 2.2e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PDKNMLBO_01366 3.7e-86 J TM2 domain
PDKNMLBO_01367 9.1e-217 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
PDKNMLBO_01368 2.3e-133 glxR K helix_turn_helix, cAMP Regulatory protein
PDKNMLBO_01369 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PDKNMLBO_01370 1.4e-220 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
PDKNMLBO_01371 3.4e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PDKNMLBO_01372 3.4e-141 glpR K DeoR C terminal sensor domain
PDKNMLBO_01373 4e-250 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
PDKNMLBO_01374 9e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
PDKNMLBO_01375 1.1e-23 lmrB EGP Major facilitator Superfamily
PDKNMLBO_01376 5.5e-43 gcvR T Belongs to the UPF0237 family
PDKNMLBO_01377 1.9e-253 S UPF0210 protein
PDKNMLBO_01378 3.3e-126 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDKNMLBO_01379 3.5e-182 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
PDKNMLBO_01380 1.5e-99
PDKNMLBO_01381 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDKNMLBO_01382 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDKNMLBO_01383 7.1e-98 T Forkhead associated domain
PDKNMLBO_01384 1.3e-104 B Belongs to the OprB family
PDKNMLBO_01385 2.2e-162 3.1.3.16 T Sigma factor PP2C-like phosphatases
PDKNMLBO_01386 0.0 E Transglutaminase-like superfamily
PDKNMLBO_01387 3.1e-220 S Protein of unknown function DUF58
PDKNMLBO_01388 2.7e-226 S ATPase family associated with various cellular activities (AAA)
PDKNMLBO_01389 0.0 S Fibronectin type 3 domain
PDKNMLBO_01390 1.9e-259 KLT Protein tyrosine kinase
PDKNMLBO_01391 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
PDKNMLBO_01392 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
PDKNMLBO_01393 1.7e-246 G Major Facilitator Superfamily
PDKNMLBO_01394 1.4e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDKNMLBO_01395 1.1e-38 csoR S Metal-sensitive transcriptional repressor
PDKNMLBO_01396 0.0 pacS 3.6.3.54 P E1-E2 ATPase
PDKNMLBO_01397 4.7e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDKNMLBO_01398 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDKNMLBO_01399 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
PDKNMLBO_01400 6.5e-169
PDKNMLBO_01401 0.0 O Type VII secretion system ESX-1, transport TM domain B
PDKNMLBO_01402 5e-225 snm S WXG100 protein secretion system (Wss), protein YukD
PDKNMLBO_01403 1.1e-47 esxU S Proteins of 100 residues with WXG
PDKNMLBO_01404 1.5e-43 S Proteins of 100 residues with WXG
PDKNMLBO_01406 1.1e-246 O Subtilase family
PDKNMLBO_01407 2.9e-294 O Subtilase family
PDKNMLBO_01408 6e-184
PDKNMLBO_01409 2.2e-146
PDKNMLBO_01410 3.7e-188
PDKNMLBO_01411 4.4e-55
PDKNMLBO_01412 1e-191
PDKNMLBO_01413 9.6e-157 T Forkhead associated domain
PDKNMLBO_01414 0.0 eccCa D FtsK/SpoIIIE family
PDKNMLBO_01415 1e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDKNMLBO_01416 5.2e-116 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDKNMLBO_01417 5e-290 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
PDKNMLBO_01418 5.2e-10
PDKNMLBO_01419 1e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
PDKNMLBO_01420 1.9e-62 S Protein of unknown function (DUF4235)
PDKNMLBO_01421 2.9e-136 G Phosphoglycerate mutase family
PDKNMLBO_01422 1.8e-256 amyE G Bacterial extracellular solute-binding protein
PDKNMLBO_01423 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PDKNMLBO_01424 1.4e-264 amyE G Bacterial extracellular solute-binding protein
PDKNMLBO_01425 7e-187 K Periplasmic binding protein-like domain
PDKNMLBO_01426 1.7e-182 K Psort location Cytoplasmic, score
PDKNMLBO_01427 4.1e-153 msmF G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01428 7.6e-152 rafG G ABC transporter permease
PDKNMLBO_01429 7.6e-106 S Protein of unknown function, DUF624
PDKNMLBO_01430 2.9e-13 S Transposon-encoded protein TnpV
PDKNMLBO_01431 9.7e-109 pepE 3.4.13.21 E Peptidase family S51
PDKNMLBO_01432 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PDKNMLBO_01433 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
PDKNMLBO_01434 1.1e-226 malE G Bacterial extracellular solute-binding protein
PDKNMLBO_01435 2.7e-247 malF G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01436 2.7e-163 malG G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01437 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PDKNMLBO_01438 5.4e-144 S HAD-hyrolase-like
PDKNMLBO_01439 1.1e-141 traX S TraX protein
PDKNMLBO_01440 1.3e-193 K Psort location Cytoplasmic, score
PDKNMLBO_01442 0.0 M cell wall anchor domain protein
PDKNMLBO_01443 8.1e-136 M LPXTG-motif cell wall anchor domain protein
PDKNMLBO_01444 3.3e-184 M Cna protein B-type domain
PDKNMLBO_01445 7e-144 srtC 3.4.22.70 M Sortase family
PDKNMLBO_01446 1.6e-131 S membrane transporter protein
PDKNMLBO_01447 8.1e-54 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
PDKNMLBO_01448 1.3e-145 S Mitochondrial biogenesis AIM24
PDKNMLBO_01449 0.0 dnaK O Heat shock 70 kDa protein
PDKNMLBO_01450 5.8e-46 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDKNMLBO_01451 3.9e-158 dnaJ1 O DnaJ molecular chaperone homology domain
PDKNMLBO_01452 5.5e-113 hspR K transcriptional regulator, MerR family
PDKNMLBO_01453 8.6e-47
PDKNMLBO_01454 3.3e-129 S HAD hydrolase, family IA, variant 3
PDKNMLBO_01456 5.8e-126 dedA S SNARE associated Golgi protein
PDKNMLBO_01457 1.6e-17 3.2.1.78 GH26 G Glycosyl hydrolase family 26
PDKNMLBO_01458 2.3e-190 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDKNMLBO_01459 1.5e-106
PDKNMLBO_01460 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDKNMLBO_01461 0.0 cbgA_1 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PDKNMLBO_01463 4.1e-135 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
PDKNMLBO_01464 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PDKNMLBO_01465 1.3e-261 lacS G Psort location CytoplasmicMembrane, score 10.00
PDKNMLBO_01466 5.6e-211 GK ROK family
PDKNMLBO_01467 4.2e-242 G Bacterial extracellular solute-binding protein
PDKNMLBO_01468 7.5e-147 G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01469 4.4e-164 G ABC transporter permease
PDKNMLBO_01470 1.9e-172 2.7.1.2 GK ROK family
PDKNMLBO_01471 0.0 G Glycosyl hydrolase family 20, domain 2
PDKNMLBO_01472 1.8e-150 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDKNMLBO_01473 2e-228 nagA 3.5.1.25 G Amidohydrolase family
PDKNMLBO_01474 2.3e-187 lacR K Transcriptional regulator, LacI family
PDKNMLBO_01475 0.0 T Diguanylate cyclase, GGDEF domain
PDKNMLBO_01476 1.9e-250 3.2.1.14 GH18 S Carbohydrate binding domain
PDKNMLBO_01477 0.0 M probably involved in cell wall
PDKNMLBO_01478 6.5e-190 K helix_turn _helix lactose operon repressor
PDKNMLBO_01479 5.1e-256 G Bacterial extracellular solute-binding protein
PDKNMLBO_01480 3.2e-159 G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01481 3.2e-153 P Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01482 7.2e-233 M Protein of unknown function (DUF2961)
PDKNMLBO_01483 1.1e-155 I alpha/beta hydrolase fold
PDKNMLBO_01484 6.5e-27 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_01485 1.1e-214 lipA I Hydrolase, alpha beta domain protein
PDKNMLBO_01486 0.0 mdlA2 V ABC transporter
PDKNMLBO_01487 0.0 yknV V ABC transporter
PDKNMLBO_01488 8e-126
PDKNMLBO_01489 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
PDKNMLBO_01490 1.4e-223 K helix_turn _helix lactose operon repressor
PDKNMLBO_01491 1.1e-232 G Alpha galactosidase A
PDKNMLBO_01492 0.0 G Alpha-L-arabinofuranosidase C-terminus
PDKNMLBO_01493 8.5e-184 tatD L TatD related DNase
PDKNMLBO_01494 0.0 kup P Transport of potassium into the cell
PDKNMLBO_01495 3e-167 S Glutamine amidotransferase domain
PDKNMLBO_01496 5.1e-150 T HD domain
PDKNMLBO_01497 1.4e-156 V ABC transporter
PDKNMLBO_01498 3.1e-240 V ABC transporter permease
PDKNMLBO_01499 0.0 S Psort location CytoplasmicMembrane, score 9.99
PDKNMLBO_01500 2.2e-58 EGP Major facilitator Superfamily
PDKNMLBO_01501 4.3e-90 EGP Major facilitator Superfamily
PDKNMLBO_01503 2.9e-64 L Phage integrase, N-terminal SAM-like domain
PDKNMLBO_01504 1.1e-26
PDKNMLBO_01505 1.1e-182 T regulation of circadian rhythm
PDKNMLBO_01506 3.2e-153 T AAA domain
PDKNMLBO_01508 3.3e-230 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PDKNMLBO_01509 5.5e-172 S Domain of unknown function (DUF4928)
PDKNMLBO_01511 6.5e-137 L HNH endonuclease
PDKNMLBO_01512 7.2e-172
PDKNMLBO_01513 2.7e-80
PDKNMLBO_01514 1.8e-57
PDKNMLBO_01515 2.3e-301 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
PDKNMLBO_01516 1.2e-07
PDKNMLBO_01517 4.8e-68
PDKNMLBO_01518 2.6e-258 S AAA domain
PDKNMLBO_01519 1.4e-292 lytC 2.1.1.197, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
PDKNMLBO_01520 5.9e-156 rfbJ M Glycosyl transferase family 2
PDKNMLBO_01521 7e-19 E Carbohydrate esterase, sialic acid-specific acetylesterase
PDKNMLBO_01522 3.5e-168 S Acyltransferase family
PDKNMLBO_01523 3.4e-252
PDKNMLBO_01524 0.0 wbbM M Glycosyl transferase family 8
PDKNMLBO_01525 1.5e-137 ppm1 GT2 M Glycosyl transferase, family 2
PDKNMLBO_01526 5.8e-68 M Putative cell wall binding repeat 2
PDKNMLBO_01527 1.9e-170 L Protein of unknown function (DUF1524)
PDKNMLBO_01528 0.0 wbbM M Glycosyl transferase family 8
PDKNMLBO_01529 1.9e-126 rgpC U Transport permease protein
PDKNMLBO_01530 6.4e-219 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
PDKNMLBO_01531 3.5e-148 M Belongs to the glycosyl hydrolase 43 family
PDKNMLBO_01532 3.2e-196 1.1.1.22 M UDP binding domain
PDKNMLBO_01533 1.6e-309 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PDKNMLBO_01534 9.6e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDKNMLBO_01535 2.4e-231 S AAA domain
PDKNMLBO_01536 1e-60
PDKNMLBO_01537 1.1e-197 K helix_turn _helix lactose operon repressor
PDKNMLBO_01538 3.3e-167 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PDKNMLBO_01539 1.1e-259 EGP Major Facilitator Superfamily
PDKNMLBO_01540 5.7e-175 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDKNMLBO_01541 1.6e-185 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDKNMLBO_01542 2.5e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
PDKNMLBO_01543 9.7e-70 ssb1 L Single-stranded DNA-binding protein
PDKNMLBO_01544 3.5e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDKNMLBO_01545 1.7e-70 rplI J Binds to the 23S rRNA
PDKNMLBO_01546 1.5e-208 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PDKNMLBO_01547 1e-62 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PDKNMLBO_01548 5.7e-167 T Pfam Adenylate and Guanylate cyclase catalytic domain
PDKNMLBO_01551 3.7e-30 S zinc-ribbon domain
PDKNMLBO_01552 9.2e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PDKNMLBO_01553 4.2e-09 M Protein of unknown function (DUF3152)
PDKNMLBO_01554 1.7e-53 M Protein of unknown function (DUF3152)
PDKNMLBO_01555 2.2e-210 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDKNMLBO_01556 2.5e-80
PDKNMLBO_01557 6.5e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PDKNMLBO_01558 5.8e-174 fahA Q Fumarylacetoacetate (FAA) hydrolase family
PDKNMLBO_01559 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDKNMLBO_01560 2e-134 3.6.3.3, 3.6.3.5, 3.6.3.54 P Heavy metal translocating P-type atpase
PDKNMLBO_01561 1.3e-169 rmuC S RmuC family
PDKNMLBO_01562 0.0 N Bacterial Ig-like domain 2
PDKNMLBO_01563 0.0 scrB 3.2.1.26, 3.2.1.97 GH101,GH32 N Glycosyl hydrolases family 43
PDKNMLBO_01564 8.4e-114 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDKNMLBO_01565 8.3e-147 spoU 2.1.1.185 J RNA methyltransferase TrmH family
PDKNMLBO_01566 6.5e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDKNMLBO_01567 9.5e-286 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDKNMLBO_01568 9.6e-283 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDKNMLBO_01569 2e-205 2.3.1.57 J Acetyltransferase (GNAT) domain
PDKNMLBO_01570 2.1e-51 S Protein of unknown function (DUF2469)
PDKNMLBO_01571 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
PDKNMLBO_01572 1.9e-247 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDKNMLBO_01573 1.3e-79 K helix_turn_helix ASNC type
PDKNMLBO_01574 1e-69 tyrA 5.4.99.5 E Chorismate mutase type II
PDKNMLBO_01575 0.0 S domain protein
PDKNMLBO_01576 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDKNMLBO_01577 1e-287 E Bacterial extracellular solute-binding proteins, family 5 Middle
PDKNMLBO_01578 3.2e-123 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDKNMLBO_01579 1.1e-133 KT Transcriptional regulatory protein, C terminal
PDKNMLBO_01580 4.9e-134
PDKNMLBO_01581 8e-97 mntP P Probably functions as a manganese efflux pump
PDKNMLBO_01582 3.4e-91 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PDKNMLBO_01583 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PDKNMLBO_01584 7.8e-174 M LPXTG-motif cell wall anchor domain protein
PDKNMLBO_01585 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
PDKNMLBO_01586 9.7e-192 yfdV S Membrane transport protein
PDKNMLBO_01587 4.2e-272 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PDKNMLBO_01588 9.6e-91 L Phage integrase family
PDKNMLBO_01589 9.1e-12 xhlB S SPP1 phage holin
PDKNMLBO_01590 1.1e-51 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
PDKNMLBO_01591 1.3e-08
PDKNMLBO_01592 1.6e-10
PDKNMLBO_01593 6.7e-111
PDKNMLBO_01594 1.2e-138 NT phage tail tape measure protein
PDKNMLBO_01595 4.5e-37
PDKNMLBO_01596 8.3e-55
PDKNMLBO_01597 2.6e-60
PDKNMLBO_01598 1.5e-35
PDKNMLBO_01599 3.6e-41
PDKNMLBO_01600 4.8e-293 S Caudovirus prohead serine protease
PDKNMLBO_01601 9e-201 S Phage portal protein
PDKNMLBO_01602 2.3e-281 S Terminase
PDKNMLBO_01603 8e-51
PDKNMLBO_01604 8.3e-139 L HNH endonuclease
PDKNMLBO_01605 4.5e-31
PDKNMLBO_01606 1e-54
PDKNMLBO_01611 8.9e-13 K BetR domain
PDKNMLBO_01613 4.5e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PDKNMLBO_01614 2e-146 atpB C it plays a direct role in the translocation of protons across the membrane
PDKNMLBO_01615 8.9e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDKNMLBO_01616 4.4e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDKNMLBO_01617 4.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDKNMLBO_01618 3.8e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDKNMLBO_01619 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDKNMLBO_01620 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDKNMLBO_01621 2.3e-44 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDKNMLBO_01622 2.3e-122 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PDKNMLBO_01623 6.8e-149 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
PDKNMLBO_01624 4.8e-195
PDKNMLBO_01625 2.7e-180
PDKNMLBO_01626 4.6e-169 trxA2 O Tetratricopeptide repeat
PDKNMLBO_01627 4.7e-122 cyaA 4.6.1.1 S CYTH
PDKNMLBO_01629 7.8e-59 psp1 3.5.99.10 J Endoribonuclease L-PSP
PDKNMLBO_01630 9.8e-272 mmuP E amino acid
PDKNMLBO_01631 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PDKNMLBO_01632 1e-295 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDKNMLBO_01633 1.6e-241 hom 1.1.1.3 E Homoserine dehydrogenase
PDKNMLBO_01634 6e-188 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDKNMLBO_01635 1.1e-283 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
PDKNMLBO_01636 2.1e-210 K helix_turn _helix lactose operon repressor
PDKNMLBO_01637 0.0 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
PDKNMLBO_01638 1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
PDKNMLBO_01639 6.3e-298 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PDKNMLBO_01640 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PDKNMLBO_01641 0.0 cydD V ABC transporter transmembrane region
PDKNMLBO_01642 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PDKNMLBO_01643 2.3e-128 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PDKNMLBO_01644 9.1e-240 G Bacterial extracellular solute-binding protein
PDKNMLBO_01645 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
PDKNMLBO_01646 0.0 KLT Protein tyrosine kinase
PDKNMLBO_01647 7.5e-151 O Thioredoxin
PDKNMLBO_01649 2.8e-197 S G5
PDKNMLBO_01650 2e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDKNMLBO_01651 3.6e-168 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDKNMLBO_01652 2.6e-109 S LytR cell envelope-related transcriptional attenuator
PDKNMLBO_01653 1.1e-283 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
PDKNMLBO_01654 6.3e-122 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
PDKNMLBO_01655 0.0 M Conserved repeat domain
PDKNMLBO_01656 4.1e-306 murJ KLT MviN-like protein
PDKNMLBO_01657 0.0 murJ KLT MviN-like protein
PDKNMLBO_01658 4e-13 S Domain of unknown function (DUF4143)
PDKNMLBO_01659 1.4e-121 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PDKNMLBO_01661 7e-14 S Psort location Extracellular, score 8.82
PDKNMLBO_01662 9.1e-181 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDKNMLBO_01663 2.3e-203 parB K Belongs to the ParB family
PDKNMLBO_01664 4.5e-172 parA D CobQ CobB MinD ParA nucleotide binding domain protein
PDKNMLBO_01665 1.7e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PDKNMLBO_01666 3.6e-91 jag S Putative single-stranded nucleic acids-binding domain
PDKNMLBO_01667 9.5e-189 yidC U Membrane protein insertase, YidC Oxa1 family
PDKNMLBO_01668 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PDKNMLBO_01669 2.9e-306 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDKNMLBO_01670 1e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDKNMLBO_01671 1.3e-235 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDKNMLBO_01672 6.2e-90 S Protein of unknown function (DUF721)
PDKNMLBO_01673 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDKNMLBO_01674 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDKNMLBO_01675 3.3e-68 S Transmembrane domain of unknown function (DUF3566)
PDKNMLBO_01676 1.2e-260 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PDKNMLBO_01677 2.9e-58 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDKNMLBO_01681 2.5e-101 S Protein of unknown function DUF45
PDKNMLBO_01682 2e-188 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDKNMLBO_01683 4.7e-241 ytfL P Transporter associated domain
PDKNMLBO_01684 2e-118 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PDKNMLBO_01685 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PDKNMLBO_01686 0.0 yjjP S Threonine/Serine exporter, ThrE
PDKNMLBO_01687 6.1e-299 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDKNMLBO_01688 2.2e-204 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDKNMLBO_01689 4.9e-42 S Protein of unknown function (DUF3073)
PDKNMLBO_01690 1.7e-63 I Sterol carrier protein
PDKNMLBO_01691 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDKNMLBO_01692 1.5e-35
PDKNMLBO_01693 1.4e-147 gluP 3.4.21.105 S Rhomboid family
PDKNMLBO_01694 1.1e-240 L ribosomal rna small subunit methyltransferase
PDKNMLBO_01695 5.7e-59 crgA D Involved in cell division
PDKNMLBO_01696 2e-141 S Bacterial protein of unknown function (DUF881)
PDKNMLBO_01697 2.5e-208 srtA 3.4.22.70 M Sortase family
PDKNMLBO_01698 1.7e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
PDKNMLBO_01699 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
PDKNMLBO_01700 5.8e-177 T Protein tyrosine kinase
PDKNMLBO_01701 1e-265 pbpA M penicillin-binding protein
PDKNMLBO_01702 9.8e-275 rodA D Belongs to the SEDS family
PDKNMLBO_01703 6.8e-242 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
PDKNMLBO_01704 9.6e-73 fhaB T Inner membrane component of T3SS, cytoplasmic domain
PDKNMLBO_01705 1.2e-131 fhaA T Protein of unknown function (DUF2662)
PDKNMLBO_01706 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
PDKNMLBO_01707 6e-225 2.7.13.3 T Histidine kinase
PDKNMLBO_01708 3.2e-113 K helix_turn_helix, Lux Regulon
PDKNMLBO_01709 6.6e-193 pldB 3.1.1.5 I Serine aminopeptidase, S33
PDKNMLBO_01710 8.8e-160 yicL EG EamA-like transporter family
PDKNMLBO_01714 2.4e-22 2.7.13.3 T Histidine kinase
PDKNMLBO_01715 1.2e-36 K helix_turn_helix, Lux Regulon
PDKNMLBO_01716 9.4e-269 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDKNMLBO_01717 6.3e-282 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
PDKNMLBO_01718 0.0 cadA P E1-E2 ATPase
PDKNMLBO_01719 7.9e-188 ansA 3.5.1.1 EJ Asparaginase
PDKNMLBO_01720 3.1e-270 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
PDKNMLBO_01721 6.8e-161 htpX O Belongs to the peptidase M48B family
PDKNMLBO_01723 3.2e-65 K Helix-turn-helix XRE-family like proteins
PDKNMLBO_01724 9.1e-170 yddG EG EamA-like transporter family
PDKNMLBO_01725 0.0 pip S YhgE Pip domain protein
PDKNMLBO_01726 0.0 pip S YhgE Pip domain protein
PDKNMLBO_01727 1.6e-205 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PDKNMLBO_01728 1.6e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDKNMLBO_01729 3.6e-296 clcA P Voltage gated chloride channel
PDKNMLBO_01730 9.2e-154 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDKNMLBO_01731 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDKNMLBO_01732 5.9e-28 E Receptor family ligand binding region
PDKNMLBO_01733 1.1e-195 K helix_turn _helix lactose operon repressor
PDKNMLBO_01734 3.1e-297 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
PDKNMLBO_01735 6.3e-10 S Protein of unknown function, DUF624
PDKNMLBO_01736 1.5e-278 scrT G Transporter major facilitator family protein
PDKNMLBO_01737 1e-251 yhjE EGP Sugar (and other) transporter
PDKNMLBO_01738 1.8e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PDKNMLBO_01739 4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PDKNMLBO_01740 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
PDKNMLBO_01741 5.8e-40 G beta-mannosidase
PDKNMLBO_01742 9.5e-189 K helix_turn _helix lactose operon repressor
PDKNMLBO_01743 1.5e-11 S Protein of unknown function, DUF624
PDKNMLBO_01744 4.1e-270 aroP E aromatic amino acid transport protein AroP K03293
PDKNMLBO_01745 0.0 V FtsX-like permease family
PDKNMLBO_01746 1.2e-227 P Sodium/hydrogen exchanger family
PDKNMLBO_01747 1.1e-75 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_01748 3.1e-176 3.4.22.70 M Sortase family
PDKNMLBO_01749 0.0 inlJ M domain protein
PDKNMLBO_01750 1.5e-238 M domain protein
PDKNMLBO_01751 1.1e-79 S Psort location Cytoplasmic, score 8.87
PDKNMLBO_01752 1.5e-18
PDKNMLBO_01753 9.9e-275 cycA E Amino acid permease
PDKNMLBO_01754 1.2e-166 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PDKNMLBO_01755 3.8e-128 thiF 2.7.7.73, 2.7.7.80 H ThiF family
PDKNMLBO_01756 3.8e-26 thiS 2.8.1.10 H ThiS family
PDKNMLBO_01757 1.5e-181 1.1.1.65 C Aldo/keto reductase family
PDKNMLBO_01758 1.9e-57 ydgJ K helix_turn_helix multiple antibiotic resistance protein
PDKNMLBO_01759 2.1e-285 lmrA1 V ABC transporter, ATP-binding protein
PDKNMLBO_01760 0.0 lmrA2 V ABC transporter transmembrane region
PDKNMLBO_01761 1.2e-119 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDKNMLBO_01762 2e-237 G MFS/sugar transport protein
PDKNMLBO_01763 4.9e-294 efeU_1 P Iron permease FTR1 family
PDKNMLBO_01764 1e-95 tpd P Fe2+ transport protein
PDKNMLBO_01765 3.2e-231 S Predicted membrane protein (DUF2318)
PDKNMLBO_01766 1e-219 macB_2 V ABC transporter permease
PDKNMLBO_01768 1.6e-201 Z012_06715 V FtsX-like permease family
PDKNMLBO_01769 9e-150 macB V ABC transporter, ATP-binding protein
PDKNMLBO_01770 2.3e-64 S FMN_bind
PDKNMLBO_01771 1.2e-88 K Psort location Cytoplasmic, score 8.87
PDKNMLBO_01772 5.3e-274 pip S YhgE Pip domain protein
PDKNMLBO_01773 0.0 pip S YhgE Pip domain protein
PDKNMLBO_01774 1.6e-225 S Putative ABC-transporter type IV
PDKNMLBO_01775 6e-38 nrdH O Glutaredoxin
PDKNMLBO_01776 6.3e-17 M cell wall binding repeat
PDKNMLBO_01777 1.7e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
PDKNMLBO_01778 5.4e-309 trxB1 1.8.1.9 C Thioredoxin domain
PDKNMLBO_01779 3.7e-228 yhjX EGP Major facilitator Superfamily
PDKNMLBO_01780 1.1e-38 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PDKNMLBO_01781 1.2e-34 lacS G Psort location CytoplasmicMembrane, score 10.00
PDKNMLBO_01782 2.3e-238 vex3 V ABC transporter permease
PDKNMLBO_01783 4.5e-214 vex1 V Efflux ABC transporter, permease protein
PDKNMLBO_01784 1.1e-113 vex2 V ABC transporter, ATP-binding protein
PDKNMLBO_01785 2.4e-80 ypeA 2.3.1.1 K Psort location Cytoplasmic, score 8.87
PDKNMLBO_01786 9.8e-121 ybjG 3.6.1.27 I Psort location CytoplasmicMembrane, score
PDKNMLBO_01787 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PDKNMLBO_01788 6.1e-73 S GtrA-like protein
PDKNMLBO_01789 0.0 S LPXTG-motif cell wall anchor domain protein
PDKNMLBO_01790 7.1e-268 M LPXTG-motif cell wall anchor domain protein
PDKNMLBO_01791 3.5e-164 3.4.22.70 M Sortase family
PDKNMLBO_01792 4e-139
PDKNMLBO_01793 1e-78
PDKNMLBO_01794 6.1e-49 S Psort location Cytoplasmic, score
PDKNMLBO_01795 7e-216 clcA_2 P Voltage gated chloride channel
PDKNMLBO_01796 3.7e-58
PDKNMLBO_01797 5.5e-235 T GHKL domain
PDKNMLBO_01798 2.8e-131 K LytTr DNA-binding domain
PDKNMLBO_01799 1.6e-210 ugpC E Belongs to the ABC transporter superfamily
PDKNMLBO_01800 2e-269 KLT Domain of unknown function (DUF4032)
PDKNMLBO_01801 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDKNMLBO_01802 3.6e-230 EGP Major facilitator Superfamily
PDKNMLBO_01803 4.5e-13 S Psort location Extracellular, score 8.82
PDKNMLBO_01804 1.3e-54 DJ Addiction module toxin, RelE StbE family
PDKNMLBO_01805 2.7e-49 S Antitoxin component of a toxin-antitoxin (TA) module
PDKNMLBO_01806 2e-118 S Short repeat of unknown function (DUF308)
PDKNMLBO_01807 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PDKNMLBO_01808 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
PDKNMLBO_01809 1.8e-83 K Cro/C1-type HTH DNA-binding domain
PDKNMLBO_01810 4e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
PDKNMLBO_01811 5.9e-154 ypfH S Phospholipase/Carboxylesterase
PDKNMLBO_01812 0.0 yjcE P Sodium/hydrogen exchanger family
PDKNMLBO_01813 1.4e-77 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDKNMLBO_01814 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
PDKNMLBO_01815 1.5e-230 nagC GK ROK family
PDKNMLBO_01816 1.3e-243 msmE7 G Bacterial extracellular solute-binding protein
PDKNMLBO_01817 2.1e-158 G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01818 3.4e-155 G Binding-protein-dependent transport system inner membrane component
PDKNMLBO_01819 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PDKNMLBO_01820 2.6e-233 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
PDKNMLBO_01821 6.2e-145 cobB2 K Sir2 family
PDKNMLBO_01822 1.7e-172 I alpha/beta hydrolase fold
PDKNMLBO_01823 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PDKNMLBO_01824 4.4e-197 K helix_turn _helix lactose operon repressor
PDKNMLBO_01825 2.1e-241 mntH P H( )-stimulated, divalent metal cation uptake system
PDKNMLBO_01826 8.4e-167 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
PDKNMLBO_01827 2.1e-116 L Protein of unknown function (DUF1524)
PDKNMLBO_01828 4.9e-243 T Diguanylate cyclase (GGDEF) domain protein
PDKNMLBO_01829 2.8e-22 V Type II restriction enzyme, methylase subunits
PDKNMLBO_01830 3.3e-155 ksgA 2.1.1.182, 2.1.1.184 J Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)