ORF_ID e_value Gene_name EC_number CAZy COGs Description
NIKODNJH_00001 1.8e-121
NIKODNJH_00002 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
NIKODNJH_00003 1.1e-83 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NIKODNJH_00004 1.9e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
NIKODNJH_00005 5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NIKODNJH_00007 2.6e-135 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
NIKODNJH_00008 5.8e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NIKODNJH_00009 6.1e-177 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
NIKODNJH_00010 3.2e-225 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
NIKODNJH_00011 3e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
NIKODNJH_00012 2.9e-72 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NIKODNJH_00013 7.1e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NIKODNJH_00014 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
NIKODNJH_00015 1e-162 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
NIKODNJH_00016 4.6e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NIKODNJH_00017 4.2e-97 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
NIKODNJH_00018 1.9e-40 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
NIKODNJH_00019 3.9e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
NIKODNJH_00020 5.1e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NIKODNJH_00021 2.6e-172 S Bacterial protein of unknown function (DUF881)
NIKODNJH_00022 4.2e-45 sbp S Protein of unknown function (DUF1290)
NIKODNJH_00023 1.6e-141 S Bacterial protein of unknown function (DUF881)
NIKODNJH_00024 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NIKODNJH_00025 3.5e-112 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
NIKODNJH_00026 5.2e-128 yebC K transcriptional regulatory protein
NIKODNJH_00027 1e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NIKODNJH_00028 1e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NIKODNJH_00029 5.6e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NIKODNJH_00030 1.8e-50 yajC U Preprotein translocase subunit
NIKODNJH_00031 1.8e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NIKODNJH_00032 2.2e-221 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
NIKODNJH_00033 2.6e-161 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NIKODNJH_00034 1.8e-246
NIKODNJH_00035 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
NIKODNJH_00036 8.2e-34
NIKODNJH_00037 1.5e-161 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
NIKODNJH_00038 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NIKODNJH_00039 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
NIKODNJH_00040 4e-69
NIKODNJH_00042 1.4e-264 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
NIKODNJH_00043 0.0 pafB K WYL domain
NIKODNJH_00044 2.1e-54
NIKODNJH_00045 0.0 helY L DEAD DEAH box helicase
NIKODNJH_00046 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
NIKODNJH_00047 3e-141 pgp 3.1.3.18 S HAD-hyrolase-like
NIKODNJH_00048 4.6e-61
NIKODNJH_00049 9.7e-112 K helix_turn_helix, mercury resistance
NIKODNJH_00050 4.7e-76 garA T Inner membrane component of T3SS, cytoplasmic domain
NIKODNJH_00051 5.4e-36
NIKODNJH_00052 2.5e-08
NIKODNJH_00059 1.6e-156 S PAC2 family
NIKODNJH_00060 6.9e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
NIKODNJH_00061 5.1e-158 G Fructosamine kinase
NIKODNJH_00062 2.4e-188 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NIKODNJH_00063 1.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NIKODNJH_00064 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
NIKODNJH_00065 4.2e-203 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NIKODNJH_00066 2.2e-41 nadR H ATPase kinase involved in NAD metabolism
NIKODNJH_00067 1.5e-112 pnuC H Nicotinamide mononucleotide transporter
NIKODNJH_00068 7.1e-09 pnuC H Nicotinamide mononucleotide transporter
NIKODNJH_00069 8e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
NIKODNJH_00070 2.6e-177 S Sucrose-6F-phosphate phosphohydrolase
NIKODNJH_00071 1.8e-32 secG U Preprotein translocase SecG subunit
NIKODNJH_00072 9.6e-149 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NIKODNJH_00073 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
NIKODNJH_00074 1.4e-170 whiA K May be required for sporulation
NIKODNJH_00075 1.1e-170 rapZ S Displays ATPase and GTPase activities
NIKODNJH_00076 7.1e-183 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
NIKODNJH_00077 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NIKODNJH_00078 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NIKODNJH_00079 5.4e-220 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00080 0.0 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00081 1.4e-139 S Domain of unknown function (DUF4194)
NIKODNJH_00082 6.9e-274 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00083 2e-13
NIKODNJH_00085 2.8e-66 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NIKODNJH_00086 4.7e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
NIKODNJH_00087 1.2e-299 ybiT S ABC transporter
NIKODNJH_00088 6.8e-184 S IMP dehydrogenase activity
NIKODNJH_00089 2.5e-280 pepC 3.4.22.40 E Peptidase C1-like family
NIKODNJH_00090 9.8e-146 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00091 3.7e-152
NIKODNJH_00092 7.4e-113
NIKODNJH_00095 3.5e-183 cat P Cation efflux family
NIKODNJH_00096 3.6e-76 S Psort location CytoplasmicMembrane, score
NIKODNJH_00097 5.5e-222 yxjG_1 E Psort location Cytoplasmic, score 8.87
NIKODNJH_00098 1.5e-143 4.1.1.44 S Carboxymuconolactone decarboxylase family
NIKODNJH_00099 4.6e-199 adhB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
NIKODNJH_00100 6.7e-72 K MerR family regulatory protein
NIKODNJH_00101 5.3e-119 ykoE S ABC-type cobalt transport system, permease component
NIKODNJH_00102 4.5e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NIKODNJH_00103 2.6e-119 yoaP E YoaP-like
NIKODNJH_00105 3.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NIKODNJH_00106 7.6e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
NIKODNJH_00107 6.4e-148 yeaZ 2.3.1.234 O Glycoprotease family
NIKODNJH_00108 9.2e-94 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
NIKODNJH_00109 7.1e-178 holA 2.7.7.7 L DNA polymerase III delta subunit
NIKODNJH_00110 0.0 comE S Competence protein
NIKODNJH_00111 1.3e-92 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
NIKODNJH_00112 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
NIKODNJH_00113 1.5e-142 ET Bacterial periplasmic substrate-binding proteins
NIKODNJH_00114 5.7e-172 corA P CorA-like Mg2+ transporter protein
NIKODNJH_00115 2.5e-163 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
NIKODNJH_00116 5.2e-65 3.4.22.70 M Sortase family
NIKODNJH_00117 1.5e-83 3.4.22.70 M Sortase family
NIKODNJH_00118 1.2e-302 M domain protein
NIKODNJH_00119 9.2e-71 pdxH S Pfam:Pyridox_oxidase
NIKODNJH_00120 1.3e-232 XK27_00240 K Fic/DOC family
NIKODNJH_00122 3.3e-118
NIKODNJH_00123 2.5e-143 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
NIKODNJH_00124 3.6e-67 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NIKODNJH_00125 2.6e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NIKODNJH_00126 4.5e-26 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NIKODNJH_00127 1.3e-15 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NIKODNJH_00128 3e-107 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
NIKODNJH_00129 4e-209 guaB 1.1.1.205 F IMP dehydrogenase family protein
NIKODNJH_00130 6.9e-231 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
NIKODNJH_00131 1.1e-268 G ABC transporter substrate-binding protein
NIKODNJH_00132 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
NIKODNJH_00133 3.3e-96 M Peptidase family M23
NIKODNJH_00134 1.6e-61
NIKODNJH_00137 5e-125 XK27_06785 V ABC transporter
NIKODNJH_00138 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NIKODNJH_00139 2.1e-109 3.8.1.2 S Haloacid dehalogenase-like hydrolase
NIKODNJH_00140 2.3e-139 S SdpI/YhfL protein family
NIKODNJH_00141 1.8e-50 sdpR K helix_turn_helix, Arsenical Resistance Operon Repressor
NIKODNJH_00142 6.1e-122 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
NIKODNJH_00143 2.5e-219 yxjG_1 E Psort location Cytoplasmic, score 8.87
NIKODNJH_00144 6.1e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NIKODNJH_00145 7.4e-108 J Acetyltransferase (GNAT) domain
NIKODNJH_00146 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NIKODNJH_00147 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
NIKODNJH_00148 5.5e-124 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NIKODNJH_00149 6.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NIKODNJH_00150 9.3e-155 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
NIKODNJH_00151 7e-178 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
NIKODNJH_00152 5.2e-278 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NIKODNJH_00153 4.2e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
NIKODNJH_00154 3e-187 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
NIKODNJH_00155 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
NIKODNJH_00156 1e-156 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
NIKODNJH_00157 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NIKODNJH_00158 4.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
NIKODNJH_00159 1.5e-197 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
NIKODNJH_00160 1.9e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
NIKODNJH_00161 7.6e-249 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
NIKODNJH_00162 2e-74
NIKODNJH_00163 2.6e-307 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NIKODNJH_00164 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
NIKODNJH_00165 3.3e-234 F Psort location CytoplasmicMembrane, score 10.00
NIKODNJH_00166 2.1e-218 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
NIKODNJH_00167 1.2e-288 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
NIKODNJH_00168 5e-145 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
NIKODNJH_00169 3e-234 hemN H Involved in the biosynthesis of porphyrin-containing compound
NIKODNJH_00170 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NIKODNJH_00171 2.9e-33 rpsT J Binds directly to 16S ribosomal RNA
NIKODNJH_00172 1.1e-133 S UPF0126 domain
NIKODNJH_00173 1.9e-227 ilvE 2.6.1.42 E Amino-transferase class IV
NIKODNJH_00175 2.2e-72 K Acetyltransferase (GNAT) domain
NIKODNJH_00176 3.2e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NIKODNJH_00177 4.8e-93 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NIKODNJH_00178 1e-89 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NIKODNJH_00179 3.8e-195 S alpha beta
NIKODNJH_00180 1.3e-25 yhjX EGP Major facilitator Superfamily
NIKODNJH_00181 2.6e-30 EGP Major facilitator Superfamily
NIKODNJH_00182 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NIKODNJH_00183 3.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NIKODNJH_00185 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NIKODNJH_00186 3.3e-74 nrdI F Probably involved in ribonucleotide reductase function
NIKODNJH_00187 1.1e-39 nrdH O Glutaredoxin
NIKODNJH_00189 7e-121 K Bacterial regulatory proteins, tetR family
NIKODNJH_00190 8.6e-224 G Transmembrane secretion effector
NIKODNJH_00192 1.9e-269 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00193 3.5e-258 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
NIKODNJH_00194 1.6e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
NIKODNJH_00195 2.9e-202 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
NIKODNJH_00196 0.0 fadD 6.2.1.3 I AMP-binding enzyme
NIKODNJH_00197 2e-180 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NIKODNJH_00198 4.1e-251 corC S CBS domain
NIKODNJH_00199 9.4e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NIKODNJH_00200 5.9e-208 phoH T PhoH-like protein
NIKODNJH_00201 1.8e-56 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
NIKODNJH_00202 2e-138 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NIKODNJH_00204 3.5e-163 spoU 2.1.1.185 J SpoU rRNA Methylase family
NIKODNJH_00205 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NIKODNJH_00206 2.7e-108 yitW S Iron-sulfur cluster assembly protein
NIKODNJH_00207 2.6e-97 iscU C SUF system FeS assembly protein, NifU family
NIKODNJH_00208 6.5e-240 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NIKODNJH_00209 1e-142 sufC O FeS assembly ATPase SufC
NIKODNJH_00210 6.1e-235 sufD O FeS assembly protein SufD
NIKODNJH_00211 1.6e-290 sufB O FeS assembly protein SufB
NIKODNJH_00212 0.0 S L,D-transpeptidase catalytic domain
NIKODNJH_00213 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NIKODNJH_00214 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
NIKODNJH_00215 4.9e-81 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
NIKODNJH_00216 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NIKODNJH_00217 1.3e-221 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NIKODNJH_00218 3e-55 3.4.23.43 S Type IV leader peptidase family
NIKODNJH_00219 8.9e-191 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NIKODNJH_00220 2.7e-82 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NIKODNJH_00221 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NIKODNJH_00222 2.5e-36
NIKODNJH_00223 3.4e-59 WQ51_05790 S Bacterial protein of unknown function (DUF948)
NIKODNJH_00224 5.6e-129 pgm3 G Phosphoglycerate mutase family
NIKODNJH_00225 3.4e-51 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
NIKODNJH_00226 2e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NIKODNJH_00227 9.2e-150 lolD V ABC transporter
NIKODNJH_00228 6.9e-215 V FtsX-like permease family
NIKODNJH_00229 1.7e-61 S Domain of unknown function (DUF4418)
NIKODNJH_00230 0.0 pcrA 3.6.4.12 L DNA helicase
NIKODNJH_00231 1.5e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NIKODNJH_00232 8.4e-249 pbuX F Permease family
NIKODNJH_00233 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
NIKODNJH_00234 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NIKODNJH_00235 1.2e-302 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
NIKODNJH_00236 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
NIKODNJH_00237 8.7e-303 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
NIKODNJH_00238 2.4e-65 yvbK 3.1.3.25 K Acetyltransferase (GNAT) domain
NIKODNJH_00239 1.3e-251 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
NIKODNJH_00241 4.1e-212 ykiI
NIKODNJH_00242 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
NIKODNJH_00243 1.5e-123 3.6.1.13 L NUDIX domain
NIKODNJH_00244 9.9e-174 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
NIKODNJH_00245 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NIKODNJH_00246 9.4e-101 pdtaR T Response regulator receiver domain protein
NIKODNJH_00247 4.3e-158 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
NIKODNJH_00248 1.9e-92 KL Type III restriction enzyme res subunit
NIKODNJH_00251 1.8e-15
NIKODNJH_00252 1e-70 topB 5.99.1.2 L DNA topoisomerase
NIKODNJH_00254 1.1e-272 pyk 2.7.1.40 G Pyruvate kinase
NIKODNJH_00255 3.3e-175 terC P Integral membrane protein, TerC family
NIKODNJH_00256 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NIKODNJH_00257 9.1e-116 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NIKODNJH_00258 8.3e-255 rpsA J Ribosomal protein S1
NIKODNJH_00259 1.9e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NIKODNJH_00260 3.5e-173 P Zinc-uptake complex component A periplasmic
NIKODNJH_00261 2e-160 znuC P ATPases associated with a variety of cellular activities
NIKODNJH_00262 3.9e-140 znuB U ABC 3 transport family
NIKODNJH_00263 7.8e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
NIKODNJH_00264 3e-102 carD K CarD-like/TRCF domain
NIKODNJH_00265 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NIKODNJH_00266 7.8e-129 T Response regulator receiver domain protein
NIKODNJH_00267 6.8e-188 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NIKODNJH_00268 1e-139 ctsW S Phosphoribosyl transferase domain
NIKODNJH_00269 1.1e-152 cof 5.2.1.8 T Eukaryotic phosphomannomutase
NIKODNJH_00270 1.5e-71 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
NIKODNJH_00271 4.8e-213
NIKODNJH_00272 0.0 S Glycosyl transferase, family 2
NIKODNJH_00273 3.4e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
NIKODNJH_00274 5.7e-208 K Cell envelope-related transcriptional attenuator domain
NIKODNJH_00276 6.9e-170 K Cell envelope-related transcriptional attenuator domain
NIKODNJH_00277 0.0 D FtsK/SpoIIIE family
NIKODNJH_00278 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
NIKODNJH_00279 6e-277 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NIKODNJH_00280 1e-143 yplQ S Haemolysin-III related
NIKODNJH_00281 2.6e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NIKODNJH_00282 1.2e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
NIKODNJH_00283 6.5e-284 sdaA 4.3.1.17 E Serine dehydratase alpha chain
NIKODNJH_00284 1.8e-91
NIKODNJH_00286 9.8e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
NIKODNJH_00287 2e-103 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
NIKODNJH_00288 2e-71 divIC D Septum formation initiator
NIKODNJH_00289 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NIKODNJH_00290 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NIKODNJH_00291 1.7e-113 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NIKODNJH_00292 1.8e-98 2.3.1.183 M Acetyltransferase (GNAT) domain
NIKODNJH_00293 0.0 S Uncharacterised protein family (UPF0182)
NIKODNJH_00294 8.4e-176 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
NIKODNJH_00295 1.8e-39 ybdD S Selenoprotein, putative
NIKODNJH_00296 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
NIKODNJH_00297 3.2e-53 azlD E Branched-chain amino acid transport protein (AzlD)
NIKODNJH_00298 7.9e-143 azlC E AzlC protein
NIKODNJH_00299 1.3e-87 M Protein of unknown function (DUF3737)
NIKODNJH_00300 2.3e-81 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NIKODNJH_00301 1.1e-309 EGP Major Facilitator Superfamily
NIKODNJH_00302 6.4e-145 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
NIKODNJH_00303 2.6e-180 opcA G Glucose-6-phosphate dehydrogenase subunit
NIKODNJH_00304 3.6e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NIKODNJH_00305 3.6e-218 patB 4.4.1.8 E Aminotransferase, class I II
NIKODNJH_00306 5.3e-147 S Belongs to the short-chain dehydrogenases reductases (SDR) family
NIKODNJH_00307 1.2e-277 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NIKODNJH_00308 0.0 lysX S Uncharacterised conserved protein (DUF2156)
NIKODNJH_00309 2.2e-241 S Putative esterase
NIKODNJH_00310 1.2e-141 ybbL V ATPases associated with a variety of cellular activities
NIKODNJH_00311 1.8e-134 ybbM V Uncharacterised protein family (UPF0014)
NIKODNJH_00312 8.4e-269 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
NIKODNJH_00313 4.2e-127 S Enoyl-(Acyl carrier protein) reductase
NIKODNJH_00314 2.4e-234 rutG F Permease family
NIKODNJH_00315 4.9e-156 3.1.3.73 G Phosphoglycerate mutase family
NIKODNJH_00316 1.5e-135 K helix_turn_helix, arabinose operon control protein
NIKODNJH_00317 1.7e-143 S Sulfite exporter TauE/SafE
NIKODNJH_00318 8.5e-70 S ECF transporter, substrate-specific component
NIKODNJH_00319 4.9e-79 2.7.1.48 F uridine kinase
NIKODNJH_00320 4.5e-158 korD 1.2.7.3 C Domain of unknown function (DUF362)
NIKODNJH_00321 9.5e-186 C Na H antiporter family protein
NIKODNJH_00322 1.1e-165 MA20_14895 S Conserved hypothetical protein 698
NIKODNJH_00323 1e-94
NIKODNJH_00324 2.1e-59 feoB P transporter of a GTP-driven Fe(2 ) uptake system
NIKODNJH_00325 2.8e-21 cysB 4.2.1.22 EGP Major facilitator Superfamily
NIKODNJH_00326 4.3e-55 KLT Protein tyrosine kinase
NIKODNJH_00327 7.4e-259 EGP Transmembrane secretion effector
NIKODNJH_00328 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
NIKODNJH_00329 1e-11
NIKODNJH_00330 8e-58 yccF S Inner membrane component domain
NIKODNJH_00331 4.7e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NIKODNJH_00332 7.7e-138 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NIKODNJH_00333 2.6e-263 pip 3.4.11.5 S alpha/beta hydrolase fold
NIKODNJH_00334 0.0 tcsS2 T Histidine kinase
NIKODNJH_00335 1.9e-130 K helix_turn_helix, Lux Regulon
NIKODNJH_00336 0.0 MV MacB-like periplasmic core domain
NIKODNJH_00337 5.1e-142 V ABC transporter, ATP-binding protein
NIKODNJH_00338 8.2e-193 K helix_turn_helix ASNC type
NIKODNJH_00339 2.6e-149 P Cobalt transport protein
NIKODNJH_00340 1.3e-306 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
NIKODNJH_00341 4.3e-95 XK27_01265 S ECF-type riboflavin transporter, S component
NIKODNJH_00342 5.9e-252 metY 2.5.1.49 E Aminotransferase class-V
NIKODNJH_00343 2.5e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
NIKODNJH_00344 3.1e-83 yraN L Belongs to the UPF0102 family
NIKODNJH_00345 1.3e-290 comM O Magnesium chelatase, subunit ChlI C-terminal
NIKODNJH_00346 4.5e-255 dprA 5.99.1.2 LU DNA recombination-mediator protein A
NIKODNJH_00347 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
NIKODNJH_00348 2e-177 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
NIKODNJH_00349 4.8e-117 safC S O-methyltransferase
NIKODNJH_00350 8.6e-246 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NIKODNJH_00353 6.1e-241 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NIKODNJH_00354 2.1e-123 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NIKODNJH_00355 2.3e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NIKODNJH_00356 5.4e-295 E ABC transporter, substrate-binding protein, family 5
NIKODNJH_00357 1.2e-248 EGP Major facilitator Superfamily
NIKODNJH_00358 1.2e-172 yjfF U Branched-chain amino acid transport system / permease component
NIKODNJH_00359 1.5e-181 ytfT U Branched-chain amino acid transport system / permease component
NIKODNJH_00360 6e-288 ytfR 3.6.3.17 G ATPases associated with a variety of cellular activities
NIKODNJH_00361 2.4e-165 G Periplasmic binding protein domain
NIKODNJH_00362 0.0 lpqB S Lipoprotein LpqB beta-propeller domain
NIKODNJH_00363 6.8e-287 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NIKODNJH_00364 4.8e-134 KT Transcriptional regulatory protein, C terminal
NIKODNJH_00365 2.2e-249 rarA L Recombination factor protein RarA
NIKODNJH_00366 0.0 L DEAD DEAH box helicase
NIKODNJH_00367 3.1e-189 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
NIKODNJH_00368 1.7e-199 gluD E Binding-protein-dependent transport system inner membrane component
NIKODNJH_00369 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
NIKODNJH_00370 4e-153 gluB ET Belongs to the bacterial solute-binding protein 3 family
NIKODNJH_00371 1.4e-136 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
NIKODNJH_00372 6.7e-139 glnQ 3.6.3.21 E ATPases associated with a variety of cellular activities
NIKODNJH_00373 7.1e-281 glnP E Binding-protein-dependent transport system inner membrane component
NIKODNJH_00374 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NIKODNJH_00375 6.9e-251 hisS 6.1.1.21 J Histidyl-tRNA synthetase
NIKODNJH_00376 1.5e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
NIKODNJH_00377 1e-139 3.5.2.10 S Creatinine amidohydrolase
NIKODNJH_00378 2.2e-246 proP EGP Sugar (and other) transporter
NIKODNJH_00379 1.4e-284 purR QT Purine catabolism regulatory protein-like family
NIKODNJH_00380 1.5e-255 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
NIKODNJH_00381 0.0 clpC O ATPase family associated with various cellular activities (AAA)
NIKODNJH_00382 4.6e-188 uspA T Belongs to the universal stress protein A family
NIKODNJH_00383 1.2e-182 S Protein of unknown function (DUF3027)
NIKODNJH_00384 4.5e-67 cspB K 'Cold-shock' DNA-binding domain
NIKODNJH_00385 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NIKODNJH_00386 6.8e-133 KT Response regulator receiver domain protein
NIKODNJH_00387 1.3e-124
NIKODNJH_00389 8.7e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NIKODNJH_00390 8.5e-77 S LytR cell envelope-related transcriptional attenuator
NIKODNJH_00391 4.4e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NIKODNJH_00392 4e-182 moxR S ATPase family associated with various cellular activities (AAA)
NIKODNJH_00393 1.2e-174 S Protein of unknown function DUF58
NIKODNJH_00394 3.6e-91
NIKODNJH_00395 1.8e-190 S von Willebrand factor (vWF) type A domain
NIKODNJH_00396 1.1e-181 S von Willebrand factor (vWF) type A domain
NIKODNJH_00397 1.1e-61
NIKODNJH_00398 2.7e-277 S PGAP1-like protein
NIKODNJH_00399 1.6e-279 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
NIKODNJH_00400 0.0 S Lysylphosphatidylglycerol synthase TM region
NIKODNJH_00401 1.4e-41 hup L Belongs to the bacterial histone-like protein family
NIKODNJH_00402 1.8e-57
NIKODNJH_00403 9.7e-141 C FMN binding
NIKODNJH_00404 3.1e-278 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
NIKODNJH_00405 1.4e-24 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
NIKODNJH_00406 3.3e-160 hisN 3.1.3.25 G Inositol monophosphatase family
NIKODNJH_00407 1.3e-301 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
NIKODNJH_00408 4.4e-283 arc O AAA ATPase forming ring-shaped complexes
NIKODNJH_00409 1.6e-123 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
NIKODNJH_00410 2.4e-178 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NIKODNJH_00411 2.3e-133 3.8.1.2 S Haloacid dehalogenase-like hydrolase
NIKODNJH_00412 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NIKODNJH_00413 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NIKODNJH_00414 1.4e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NIKODNJH_00415 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
NIKODNJH_00417 1.2e-106 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
NIKODNJH_00418 3.7e-171 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
NIKODNJH_00419 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
NIKODNJH_00420 1.1e-239 carA 6.3.5.5 F Belongs to the CarA family
NIKODNJH_00421 6.7e-75 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NIKODNJH_00422 2e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NIKODNJH_00423 9.5e-233 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NIKODNJH_00424 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NIKODNJH_00425 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NIKODNJH_00426 1.2e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NIKODNJH_00427 8.1e-188 yocS S SBF-like CPA transporter family (DUF4137)
NIKODNJH_00429 1.1e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
NIKODNJH_00430 6.5e-226 M Glycosyl transferase 4-like domain
NIKODNJH_00431 3.3e-228 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NIKODNJH_00432 4.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
NIKODNJH_00433 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
NIKODNJH_00434 1.9e-36
NIKODNJH_00435 5.9e-310 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
NIKODNJH_00436 1e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NIKODNJH_00437 8.3e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
NIKODNJH_00438 1.7e-235 purD 6.3.4.13 F Belongs to the GARS family
NIKODNJH_00439 1.6e-247 EGP Major facilitator Superfamily
NIKODNJH_00440 1.1e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
NIKODNJH_00441 1.1e-214 1.1.1.1 C Iron-containing alcohol dehydrogenase
NIKODNJH_00442 3.3e-129 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
NIKODNJH_00443 9.1e-189 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
NIKODNJH_00444 2.5e-203 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
NIKODNJH_00445 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
NIKODNJH_00446 2.3e-89 zur P Belongs to the Fur family
NIKODNJH_00447 1.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NIKODNJH_00448 1.1e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NIKODNJH_00449 1.2e-183 adh3 C Zinc-binding dehydrogenase
NIKODNJH_00450 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NIKODNJH_00451 2.6e-256 macB_8 V MacB-like periplasmic core domain
NIKODNJH_00452 4.4e-147 M Conserved repeat domain
NIKODNJH_00453 8.1e-134 V ATPases associated with a variety of cellular activities
NIKODNJH_00454 7.4e-75
NIKODNJH_00455 3.1e-127 XK27_08050 O prohibitin homologues
NIKODNJH_00456 1.4e-43 XAC3035 O Glutaredoxin
NIKODNJH_00457 3.2e-75 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
NIKODNJH_00458 1.1e-222 mtnE 2.6.1.83 E Aminotransferase class I and II
NIKODNJH_00459 4.9e-98 metI P Psort location CytoplasmicMembrane, score 9.99
NIKODNJH_00460 6.5e-193 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NIKODNJH_00461 1.9e-153 metQ M NLPA lipoprotein
NIKODNJH_00462 9.1e-200 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NIKODNJH_00463 6.9e-143 cjaA ET Bacterial periplasmic substrate-binding proteins
NIKODNJH_00464 1.7e-151 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
NIKODNJH_00465 3.6e-120 E Binding-protein-dependent transport system inner membrane component
NIKODNJH_00466 1.1e-108 papP E Binding-protein-dependent transport system inner membrane component
NIKODNJH_00467 2.7e-114 K acetyltransferase
NIKODNJH_00471 0.0 tetP J Elongation factor G, domain IV
NIKODNJH_00473 7.5e-175 ydcZ S Putative inner membrane exporter, YdcZ
NIKODNJH_00475 2e-214 ybiR P Citrate transporter
NIKODNJH_00476 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NIKODNJH_00477 7.7e-307 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NIKODNJH_00478 3.4e-269 yhdG E aromatic amino acid transport protein AroP K03293
NIKODNJH_00479 2.7e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NIKODNJH_00480 3.9e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NIKODNJH_00481 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
NIKODNJH_00482 0.0 macB_2 V ATPases associated with a variety of cellular activities
NIKODNJH_00483 1e-218 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
NIKODNJH_00484 2.6e-191 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
NIKODNJH_00485 2.3e-139 sapF E ATPases associated with a variety of cellular activities
NIKODNJH_00486 7.1e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
NIKODNJH_00487 4.7e-139 EP Binding-protein-dependent transport system inner membrane component
NIKODNJH_00488 4.8e-166 P Binding-protein-dependent transport system inner membrane component
NIKODNJH_00489 2.3e-293 E ABC transporter, substrate-binding protein, family 5
NIKODNJH_00490 1.6e-241 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NIKODNJH_00491 4.5e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NIKODNJH_00492 7e-82 S SnoaL-like domain
NIKODNJH_00493 2.3e-142 T His Kinase A (phosphoacceptor) domain
NIKODNJH_00494 7.7e-120 K Transcriptional regulatory protein, C terminal
NIKODNJH_00495 3.1e-275 G Bacterial extracellular solute-binding protein
NIKODNJH_00496 2.2e-246 G Bacterial extracellular solute-binding protein
NIKODNJH_00497 0.0 abfA1 3.2.1.55 GH51 G arabinose metabolic process
NIKODNJH_00498 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NIKODNJH_00499 1.7e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
NIKODNJH_00500 0.0 trxB1 1.8.1.9 C Thioredoxin domain
NIKODNJH_00501 1.2e-228 yhjX EGP Major facilitator Superfamily
NIKODNJH_00502 3.3e-43 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
NIKODNJH_00503 3.8e-31 lacS G Psort location CytoplasmicMembrane, score 10.00
NIKODNJH_00504 2.2e-241 vex3 V ABC transporter permease
NIKODNJH_00505 8.5e-213 vex1 V Efflux ABC transporter, permease protein
NIKODNJH_00506 1.1e-113 vex2 V ABC transporter, ATP-binding protein
NIKODNJH_00507 8.9e-80 ypeA 2.3.1.1 K Psort location Cytoplasmic, score 8.87
NIKODNJH_00508 9.8e-121 ybjG 3.6.1.27 I Psort location CytoplasmicMembrane, score
NIKODNJH_00509 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
NIKODNJH_00510 6.7e-72 S GtrA-like protein
NIKODNJH_00511 1.5e-10 S LPXTG-motif cell wall anchor domain protein
NIKODNJH_00512 0.0 S LPXTG-motif cell wall anchor domain protein
NIKODNJH_00513 9e-287 M LPXTG-motif cell wall anchor domain protein
NIKODNJH_00514 1.2e-148 3.4.22.70 M Sortase family
NIKODNJH_00515 2.6e-138
NIKODNJH_00516 8.8e-48 S Psort location Cytoplasmic, score
NIKODNJH_00517 9.2e-216 clcA_2 P Voltage gated chloride channel
NIKODNJH_00518 4e-55
NIKODNJH_00519 5.5e-235 T GHKL domain
NIKODNJH_00520 1.8e-130 K LytTr DNA-binding domain
NIKODNJH_00521 1.6e-210 ugpC E Belongs to the ABC transporter superfamily
NIKODNJH_00522 2e-269 KLT Domain of unknown function (DUF4032)
NIKODNJH_00523 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NIKODNJH_00524 2.8e-230 EGP Major facilitator Superfamily
NIKODNJH_00525 4.5e-13 S Psort location Extracellular, score 8.82
NIKODNJH_00526 7.5e-55 DJ Addiction module toxin, RelE StbE family
NIKODNJH_00527 2.3e-48 S Antitoxin component of a toxin-antitoxin (TA) module
NIKODNJH_00528 8e-123 S Short repeat of unknown function (DUF308)
NIKODNJH_00529 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NIKODNJH_00530 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
NIKODNJH_00531 1.8e-83 K Cro/C1-type HTH DNA-binding domain
NIKODNJH_00532 2.7e-170 I alpha/beta hydrolase fold
NIKODNJH_00533 2.8e-145 cobB2 K Sir2 family
NIKODNJH_00534 4.1e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
NIKODNJH_00535 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
NIKODNJH_00536 3.4e-155 G Binding-protein-dependent transport system inner membrane component
NIKODNJH_00537 2.1e-158 G Binding-protein-dependent transport system inner membrane component
NIKODNJH_00538 3.8e-243 msmE7 G Bacterial extracellular solute-binding protein
NIKODNJH_00539 1.5e-230 nagC GK ROK family
NIKODNJH_00540 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
NIKODNJH_00541 1.4e-77 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NIKODNJH_00542 0.0 yjcE P Sodium/hydrogen exchanger family
NIKODNJH_00543 1.2e-154 ypfH S Phospholipase/Carboxylesterase
NIKODNJH_00544 4e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
NIKODNJH_00545 3.8e-163 S Fic/DOC family
NIKODNJH_00547 1e-150 recQ 3.6.4.12, 5.99.1.2 F RecQ zinc-binding
NIKODNJH_00548 1.8e-79 L helicase
NIKODNJH_00551 1.7e-10
NIKODNJH_00554 3.5e-11
NIKODNJH_00562 1.1e-37
NIKODNJH_00563 1.2e-112 L Phage integrase family
NIKODNJH_00564 4.6e-268 L PFAM Integrase catalytic
NIKODNJH_00565 1.9e-106 L DNA restriction-modification system
NIKODNJH_00566 1.9e-147 G Binding-protein-dependent transport system inner membrane component
NIKODNJH_00567 9.1e-168 G ABC transporter permease
NIKODNJH_00568 2.8e-22 V Type II restriction enzyme, methylase subunits
NIKODNJH_00569 3.3e-155 ksgA 2.1.1.182, 2.1.1.184 J Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
NIKODNJH_00570 9.3e-108 L Transposase and inactivated derivatives
NIKODNJH_00571 3.8e-29 L transposase activity
NIKODNJH_00572 3.9e-131 clcA P Voltage gated chloride channel
NIKODNJH_00573 1.8e-157 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NIKODNJH_00574 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NIKODNJH_00575 5.4e-29 E Receptor family ligand binding region
NIKODNJH_00576 1.1e-195 K helix_turn _helix lactose operon repressor
NIKODNJH_00577 3.1e-297 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
NIKODNJH_00578 4.9e-10 S Protein of unknown function, DUF624
NIKODNJH_00579 2.2e-277 scrT G Transporter major facilitator family protein
NIKODNJH_00580 3e-251 yhjE EGP Sugar (and other) transporter
NIKODNJH_00581 1.8e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NIKODNJH_00582 4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NIKODNJH_00583 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
NIKODNJH_00584 5.8e-40 G beta-mannosidase
NIKODNJH_00585 5.6e-189 K helix_turn _helix lactose operon repressor
NIKODNJH_00586 4.1e-270 aroP E aromatic amino acid transport protein AroP K03293
NIKODNJH_00587 0.0 V FtsX-like permease family
NIKODNJH_00588 3.3e-227 P Sodium/hydrogen exchanger family
NIKODNJH_00589 1.3e-76 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00590 4.4e-173 3.4.22.70 M Sortase family
NIKODNJH_00591 0.0 inlJ M domain protein
NIKODNJH_00592 5.5e-201 M LPXTG cell wall anchor motif
NIKODNJH_00593 2.5e-89 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00594 9.9e-275 cycA E Amino acid permease
NIKODNJH_00595 1.2e-166 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
NIKODNJH_00596 1.2e-126 thiF 2.7.7.73, 2.7.7.80 H ThiF family
NIKODNJH_00597 2.5e-26 thiS 2.8.1.10 H ThiS family
NIKODNJH_00598 6.1e-183 1.1.1.65 C Aldo/keto reductase family
NIKODNJH_00599 1.9e-57 ydgJ K helix_turn_helix multiple antibiotic resistance protein
NIKODNJH_00600 2.1e-285 lmrA1 V ABC transporter, ATP-binding protein
NIKODNJH_00601 0.0 lmrA2 V ABC transporter transmembrane region
NIKODNJH_00602 7.4e-119 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NIKODNJH_00603 9.9e-237 G MFS/sugar transport protein
NIKODNJH_00604 3.7e-294 efeU_1 P Iron permease FTR1 family
NIKODNJH_00605 1.4e-92 tpd P Fe2+ transport protein
NIKODNJH_00606 9.4e-231 S Predicted membrane protein (DUF2318)
NIKODNJH_00607 8e-220 macB_2 V ABC transporter permease
NIKODNJH_00609 2.7e-201 Z012_06715 V FtsX-like permease family
NIKODNJH_00610 2.2e-148 macB V ABC transporter, ATP-binding protein
NIKODNJH_00611 2.6e-63 S FMN_bind
NIKODNJH_00612 1.2e-88 K Psort location Cytoplasmic, score 8.87
NIKODNJH_00613 3.1e-274 pip S YhgE Pip domain protein
NIKODNJH_00614 0.0 pip S YhgE Pip domain protein
NIKODNJH_00615 1.6e-225 S Putative ABC-transporter type IV
NIKODNJH_00616 6e-38 nrdH O Glutaredoxin
NIKODNJH_00619 8.6e-309 pepD E Peptidase family C69
NIKODNJH_00620 1.5e-194 XK27_01805 M Glycosyltransferase like family 2
NIKODNJH_00622 4.9e-108 icaR K Bacterial regulatory proteins, tetR family
NIKODNJH_00623 9.9e-172 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NIKODNJH_00624 1.2e-236 amt U Ammonium Transporter Family
NIKODNJH_00625 1e-54 glnB K Nitrogen regulatory protein P-II
NIKODNJH_00626 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
NIKODNJH_00627 3.3e-248 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
NIKODNJH_00628 3.1e-249 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
NIKODNJH_00629 6.2e-137 cobQ S CobB/CobQ-like glutamine amidotransferase domain
NIKODNJH_00630 1e-27 S granule-associated protein
NIKODNJH_00631 0.0 ubiB S ABC1 family
NIKODNJH_00632 4.1e-192 K Periplasmic binding protein domain
NIKODNJH_00633 1.1e-242 G Bacterial extracellular solute-binding protein
NIKODNJH_00634 4e-07 P Binding-protein-dependent transport system inner membrane component
NIKODNJH_00635 3.1e-167 P Binding-protein-dependent transport system inner membrane component
NIKODNJH_00636 9.3e-147 G Binding-protein-dependent transport system inner membrane component
NIKODNJH_00637 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
NIKODNJH_00638 0.0 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
NIKODNJH_00639 0.0 G Bacterial Ig-like domain (group 4)
NIKODNJH_00640 1.5e-208 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
NIKODNJH_00641 2.7e-117 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NIKODNJH_00642 3.9e-91
NIKODNJH_00643 4.5e-224 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
NIKODNJH_00644 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NIKODNJH_00645 5.5e-141 cpaE D bacterial-type flagellum organization
NIKODNJH_00646 2.7e-185 cpaF U Type II IV secretion system protein
NIKODNJH_00647 4e-125 U Type ii secretion system
NIKODNJH_00648 2.6e-86 gspF NU Type II secretion system (T2SS), protein F
NIKODNJH_00649 1.3e-42 S Protein of unknown function (DUF4244)
NIKODNJH_00650 4.3e-59 U TadE-like protein
NIKODNJH_00651 3e-55 S TIGRFAM helicase secretion neighborhood TadE-like protein
NIKODNJH_00652 1.4e-217 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
NIKODNJH_00653 1.6e-193 S Psort location CytoplasmicMembrane, score
NIKODNJH_00654 1.1e-96 K Bacterial regulatory proteins, tetR family
NIKODNJH_00655 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
NIKODNJH_00656 2.2e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NIKODNJH_00657 3.4e-135 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
NIKODNJH_00658 1.4e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
NIKODNJH_00659 1.8e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NIKODNJH_00660 8e-73 S Domain of unknown function (DUF4143)
NIKODNJH_00661 0.0 3.2.1.22 G lipolytic protein G-D-S-L family
NIKODNJH_00662 1.9e-271 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
NIKODNJH_00663 4.1e-232 G Bacterial extracellular solute-binding protein
NIKODNJH_00664 5.7e-156 malC G Binding-protein-dependent transport system inner membrane component
NIKODNJH_00665 7.4e-142 G Binding-protein-dependent transport system inner membrane component
NIKODNJH_00666 5.4e-160 K Periplasmic binding protein domain
NIKODNJH_00667 5.9e-46 K Acetyltransferase (GNAT) family
NIKODNJH_00668 1.3e-23 S Protein of unknown function (DUF1778)
NIKODNJH_00669 6.7e-07 2.7.13.3 T Histidine kinase
NIKODNJH_00670 4.1e-38 K helix_turn_helix, Lux Regulon
NIKODNJH_00671 3.8e-40
NIKODNJH_00672 2.4e-115
NIKODNJH_00673 9.8e-302 S Calcineurin-like phosphoesterase
NIKODNJH_00674 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NIKODNJH_00675 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
NIKODNJH_00676 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
NIKODNJH_00677 0.0 3.2.1.97 GH101 G Glycosyl hydrolases family 43
NIKODNJH_00678 4.1e-195 K helix_turn _helix lactose operon repressor
NIKODNJH_00679 1.3e-203 abf G Glycosyl hydrolases family 43
NIKODNJH_00680 2.7e-244 G Bacterial extracellular solute-binding protein
NIKODNJH_00681 5e-168 G Binding-protein-dependent transport system inner membrane component
NIKODNJH_00682 4.6e-155 U Binding-protein-dependent transport system inner membrane component
NIKODNJH_00683 0.0 S Beta-L-arabinofuranosidase, GH127
NIKODNJH_00684 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
NIKODNJH_00685 2.7e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
NIKODNJH_00686 5.9e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
NIKODNJH_00687 2.3e-191 3.6.1.27 I PAP2 superfamily
NIKODNJH_00688 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NIKODNJH_00689 4e-108 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NIKODNJH_00690 9.3e-193 holB 2.7.7.7 L DNA polymerase III
NIKODNJH_00691 3.5e-183 K helix_turn _helix lactose operon repressor
NIKODNJH_00692 6e-39 ptsH G PTS HPr component phosphorylation site
NIKODNJH_00693 4.6e-286 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NIKODNJH_00694 1.1e-106 S Phosphatidylethanolamine-binding protein
NIKODNJH_00695 0.0 pepD E Peptidase family C69
NIKODNJH_00696 1.5e-288 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
NIKODNJH_00697 6.7e-62 S Macrophage migration inhibitory factor (MIF)
NIKODNJH_00698 7.1e-95 S GtrA-like protein
NIKODNJH_00699 1.8e-262 EGP Major facilitator Superfamily
NIKODNJH_00700 1.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
NIKODNJH_00701 7e-184
NIKODNJH_00702 1.6e-98 S Protein of unknown function (DUF805)
NIKODNJH_00703 5.5e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NIKODNJH_00706 1.3e-279 S Calcineurin-like phosphoesterase
NIKODNJH_00707 1.1e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
NIKODNJH_00708 7.1e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NIKODNJH_00709 1.3e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NIKODNJH_00710 3.6e-200 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
NIKODNJH_00711 1e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NIKODNJH_00712 2.1e-176 plsC2 2.3.1.51 I Phosphate acyltransferases
NIKODNJH_00713 1.7e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NIKODNJH_00714 3.8e-215 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
NIKODNJH_00715 3.5e-173 S CAAX protease self-immunity
NIKODNJH_00716 1.7e-137 M Mechanosensitive ion channel
NIKODNJH_00717 1.1e-228 MA20_36090 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00718 2.4e-228 MA20_36090 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00719 2e-123 K Bacterial regulatory proteins, tetR family
NIKODNJH_00720 1.4e-231 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
NIKODNJH_00721 2e-166 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase, C-terminal domain
NIKODNJH_00723 1.3e-227 gnuT EG GntP family permease
NIKODNJH_00724 3.6e-78 gntK 2.7.1.12 F Shikimate kinase
NIKODNJH_00725 7.3e-127 gntR K FCD
NIKODNJH_00726 2.1e-228 yxiO S Vacuole effluxer Atg22 like
NIKODNJH_00727 0.0 S Psort location Cytoplasmic, score 8.87
NIKODNJH_00728 8.4e-30 rpmB J Ribosomal L28 family
NIKODNJH_00729 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
NIKODNJH_00730 3.9e-94 rsmD 2.1.1.171 L Conserved hypothetical protein 95
NIKODNJH_00731 4.6e-150 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
NIKODNJH_00732 3.6e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NIKODNJH_00733 1.8e-34 CP_0960 S Belongs to the UPF0109 family
NIKODNJH_00734 3.9e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
NIKODNJH_00735 3.1e-179 S Endonuclease/Exonuclease/phosphatase family
NIKODNJH_00736 2.7e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NIKODNJH_00737 3.9e-301 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
NIKODNJH_00738 5.6e-152 guaA1 6.3.5.2 F Peptidase C26
NIKODNJH_00739 0.0 yjjK S ABC transporter
NIKODNJH_00740 2.1e-94
NIKODNJH_00742 2.2e-91 ilvN 2.2.1.6 E ACT domain
NIKODNJH_00743 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
NIKODNJH_00744 5.7e-136 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NIKODNJH_00745 1e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
NIKODNJH_00746 1.8e-113 yceD S Uncharacterized ACR, COG1399
NIKODNJH_00747 8.5e-134
NIKODNJH_00748 1e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NIKODNJH_00749 3.2e-58 S Protein of unknown function (DUF3039)
NIKODNJH_00750 4.3e-194 yghZ C Aldo/keto reductase family
NIKODNJH_00751 3.2e-77 soxR K MerR, DNA binding
NIKODNJH_00752 3.6e-120 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NIKODNJH_00753 3.9e-139 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NIKODNJH_00754 1.5e-250 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NIKODNJH_00755 3.6e-238 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
NIKODNJH_00758 7.9e-180 S Auxin Efflux Carrier
NIKODNJH_00759 0.0 pgi 5.3.1.9 G Belongs to the GPI family
NIKODNJH_00760 3.9e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NIKODNJH_00761 2.6e-123 lepB 3.4.21.89 U Belongs to the peptidase S26 family
NIKODNJH_00762 6.1e-137 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NIKODNJH_00763 5e-128 V ATPases associated with a variety of cellular activities
NIKODNJH_00764 2.5e-270 V Efflux ABC transporter, permease protein
NIKODNJH_00765 2.7e-166 mdcF S Transporter, auxin efflux carrier (AEC) family protein
NIKODNJH_00766 2.6e-230 dapE 3.5.1.18 E Peptidase dimerisation domain
NIKODNJH_00767 3.3e-308 rne 3.1.26.12 J Ribonuclease E/G family
NIKODNJH_00768 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
NIKODNJH_00769 2.6e-39 rpmA J Ribosomal L27 protein
NIKODNJH_00770 7e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NIKODNJH_00771 6.7e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NIKODNJH_00772 7.4e-233 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
NIKODNJH_00774 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NIKODNJH_00775 4.2e-128 nusG K Participates in transcription elongation, termination and antitermination
NIKODNJH_00776 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NIKODNJH_00777 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NIKODNJH_00778 5.9e-143 QT PucR C-terminal helix-turn-helix domain
NIKODNJH_00779 0.0
NIKODNJH_00780 6.6e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
NIKODNJH_00781 2.1e-79 bioY S BioY family
NIKODNJH_00782 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
NIKODNJH_00783 0.0 pccB I Carboxyl transferase domain
NIKODNJH_00784 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
NIKODNJH_00786 1.2e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NIKODNJH_00787 0.0 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
NIKODNJH_00789 2.4e-116
NIKODNJH_00790 1.7e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NIKODNJH_00791 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
NIKODNJH_00792 1.7e-91 lemA S LemA family
NIKODNJH_00793 0.0 S Predicted membrane protein (DUF2207)
NIKODNJH_00794 2.4e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
NIKODNJH_00795 2e-296 yegQ O Peptidase family U32 C-terminal domain
NIKODNJH_00796 5.3e-184 yfiH Q Multi-copper polyphenol oxidoreductase laccase
NIKODNJH_00797 2.5e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
NIKODNJH_00798 3.4e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
NIKODNJH_00799 1.3e-58 D nuclear chromosome segregation
NIKODNJH_00800 1.1e-266 pepC 3.4.22.40 E Peptidase C1-like family
NIKODNJH_00801 6.3e-210 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NIKODNJH_00802 9.8e-222 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NIKODNJH_00803 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NIKODNJH_00804 2.5e-221 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
NIKODNJH_00805 1.3e-128 KT Transcriptional regulatory protein, C terminal
NIKODNJH_00806 3.6e-197 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
NIKODNJH_00807 3.7e-163 pstC P probably responsible for the translocation of the substrate across the membrane
NIKODNJH_00808 7.5e-167 pstA P Phosphate transport system permease
NIKODNJH_00809 3e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NIKODNJH_00810 2e-142 P Zinc-uptake complex component A periplasmic
NIKODNJH_00811 1.3e-246 pbuO S Permease family
NIKODNJH_00812 1.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NIKODNJH_00813 2.4e-36 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NIKODNJH_00814 1.9e-176 T Forkhead associated domain
NIKODNJH_00815 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
NIKODNJH_00816 1.6e-42
NIKODNJH_00817 3.7e-112 flgA NO SAF
NIKODNJH_00818 4.6e-30 fmdB S Putative regulatory protein
NIKODNJH_00819 1e-115 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
NIKODNJH_00820 3.9e-113 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
NIKODNJH_00821 1.6e-147
NIKODNJH_00822 2.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NIKODNJH_00826 5.5e-25 rpmG J Ribosomal protein L33
NIKODNJH_00827 3.2e-204 murB 1.3.1.98 M Cell wall formation
NIKODNJH_00828 6.2e-266 E aromatic amino acid transport protein AroP K03293
NIKODNJH_00829 8.3e-59 fdxA C 4Fe-4S binding domain
NIKODNJH_00830 2.5e-206 dapC E Aminotransferase class I and II
NIKODNJH_00832 0.0 E Bacterial extracellular solute-binding proteins, family 5 Middle
NIKODNJH_00833 7.7e-180 EP Binding-protein-dependent transport system inner membrane component
NIKODNJH_00834 3.9e-141 EP Binding-protein-dependent transport system inner membrane component
NIKODNJH_00835 8.7e-156 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
NIKODNJH_00836 2.8e-151 dppF E ABC transporter
NIKODNJH_00837 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
NIKODNJH_00839 0.0 G Psort location Cytoplasmic, score 8.87
NIKODNJH_00840 9e-233 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
NIKODNJH_00841 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
NIKODNJH_00842 9.6e-296 CE10 I Belongs to the type-B carboxylesterase lipase family
NIKODNJH_00844 4.4e-223 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NIKODNJH_00845 4.7e-252 M Bacterial capsule synthesis protein PGA_cap
NIKODNJH_00846 9.4e-186 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NIKODNJH_00847 2.1e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
NIKODNJH_00848 1.2e-121
NIKODNJH_00849 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
NIKODNJH_00850 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NIKODNJH_00851 3.4e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
NIKODNJH_00852 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
NIKODNJH_00853 1.4e-76 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NIKODNJH_00854 2e-216 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
NIKODNJH_00855 1.5e-239 EGP Major facilitator Superfamily
NIKODNJH_00856 1.1e-195 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
NIKODNJH_00857 4.7e-182 rhaR_1 K helix_turn_helix, arabinose operon control protein
NIKODNJH_00858 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
NIKODNJH_00859 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
NIKODNJH_00860 2.3e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NIKODNJH_00861 1.4e-116 rplD J Forms part of the polypeptide exit tunnel
NIKODNJH_00862 6.8e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NIKODNJH_00863 8e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NIKODNJH_00864 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NIKODNJH_00865 1.9e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NIKODNJH_00866 1e-97 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NIKODNJH_00867 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NIKODNJH_00868 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
NIKODNJH_00869 4.9e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NIKODNJH_00870 3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NIKODNJH_00871 8.7e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NIKODNJH_00872 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NIKODNJH_00873 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NIKODNJH_00874 4.6e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NIKODNJH_00875 3.8e-96 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NIKODNJH_00876 3.3e-59 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NIKODNJH_00877 1.2e-92 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NIKODNJH_00878 3.4e-25 rpmD J Ribosomal protein L30p/L7e
NIKODNJH_00879 9.8e-74 rplO J binds to the 23S rRNA
NIKODNJH_00880 3.8e-238 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NIKODNJH_00881 2.5e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NIKODNJH_00882 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NIKODNJH_00883 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
NIKODNJH_00884 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NIKODNJH_00885 1.9e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NIKODNJH_00886 4.7e-185 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NIKODNJH_00887 1.3e-66 rplQ J Ribosomal protein L17
NIKODNJH_00888 1.2e-183 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NIKODNJH_00889 4.6e-49 gcs2 S A circularly permuted ATPgrasp
NIKODNJH_00890 7.6e-41 E Transglutaminase/protease-like homologues
NIKODNJH_00892 2e-102
NIKODNJH_00893 6.1e-191 nusA K Participates in both transcription termination and antitermination
NIKODNJH_00894 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NIKODNJH_00895 2.2e-69 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NIKODNJH_00896 5.6e-187 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NIKODNJH_00897 6.8e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
NIKODNJH_00898 4.1e-251 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NIKODNJH_00899 3.8e-108
NIKODNJH_00901 2.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NIKODNJH_00902 2.7e-214 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NIKODNJH_00903 1.5e-250 T GHKL domain
NIKODNJH_00904 2.8e-151 T LytTr DNA-binding domain
NIKODNJH_00905 3.6e-07 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
NIKODNJH_00906 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
NIKODNJH_00907 0.0 crr G pts system, glucose-specific IIABC component
NIKODNJH_00908 3.2e-153 arbG K CAT RNA binding domain
NIKODNJH_00909 5.4e-198 I Diacylglycerol kinase catalytic domain
NIKODNJH_00910 1.2e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NIKODNJH_00912 6.7e-187 yegU O ADP-ribosylglycohydrolase
NIKODNJH_00913 4.1e-189 yegV G pfkB family carbohydrate kinase
NIKODNJH_00914 1.1e-270 U Permease for cytosine/purines, uracil, thiamine, allantoin
NIKODNJH_00915 4.3e-103 Q Isochorismatase family
NIKODNJH_00916 2.3e-214 S Choline/ethanolamine kinase
NIKODNJH_00917 2.5e-275 eat E Amino acid permease
NIKODNJH_00918 5.3e-264 gabT 2.6.1.19, 2.6.1.22 H Aminotransferase class-III
NIKODNJH_00919 5.6e-141 yidP K UTRA
NIKODNJH_00920 1.9e-121 degU K helix_turn_helix, Lux Regulon
NIKODNJH_00921 1.5e-257 tcsS3 KT PspC domain
NIKODNJH_00922 4.1e-145 pspC KT PspC domain
NIKODNJH_00923 2.7e-92
NIKODNJH_00924 3.3e-115 S Protein of unknown function (DUF4125)
NIKODNJH_00925 0.0 S Domain of unknown function (DUF4037)
NIKODNJH_00926 2.4e-212 araJ EGP Major facilitator Superfamily
NIKODNJH_00928 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
NIKODNJH_00929 5.6e-203 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
NIKODNJH_00930 3e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NIKODNJH_00931 0.0 4.2.1.53 S MCRA family
NIKODNJH_00932 3.3e-89 phoU P Plays a role in the regulation of phosphate uptake
NIKODNJH_00933 3.1e-215 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NIKODNJH_00934 6.2e-41
NIKODNJH_00935 1.2e-216 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NIKODNJH_00936 1.3e-165 usp 3.5.1.28 CBM50 S CHAP domain
NIKODNJH_00937 1.3e-79 M NlpC/P60 family
NIKODNJH_00938 2.3e-190 T Universal stress protein family
NIKODNJH_00939 1e-72 attW O OsmC-like protein
NIKODNJH_00940 8.4e-181 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NIKODNJH_00941 4.2e-129 folA 1.5.1.3 H dihydrofolate reductase
NIKODNJH_00942 3.6e-85 ptpA 3.1.3.48 T low molecular weight
NIKODNJH_00944 9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NIKODNJH_00945 4.4e-160 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NIKODNJH_00949 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
NIKODNJH_00950 1.2e-158
NIKODNJH_00951 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
NIKODNJH_00952 3.5e-282 pelF GT4 M Domain of unknown function (DUF3492)
NIKODNJH_00953 4.9e-53 pelG S Putative exopolysaccharide Exporter (EPS-E)
NIKODNJH_00954 2.7e-219 pelG S Putative exopolysaccharide Exporter (EPS-E)
NIKODNJH_00955 0.0 cotH M CotH kinase protein
NIKODNJH_00956 1.4e-158 P VTC domain
NIKODNJH_00957 2.2e-111 S Domain of unknown function (DUF4956)
NIKODNJH_00958 0.0 yliE T Putative diguanylate phosphodiesterase
NIKODNJH_00959 1.8e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
NIKODNJH_00960 4.2e-180 3.4.14.13 M Glycosyltransferase like family 2
NIKODNJH_00961 1.3e-237 S AI-2E family transporter
NIKODNJH_00962 2.4e-231 epsG M Glycosyl transferase family 21
NIKODNJH_00963 3.3e-232 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
NIKODNJH_00964 1.5e-200 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NIKODNJH_00965 3.9e-99 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NIKODNJH_00966 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NIKODNJH_00967 9.6e-115 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
NIKODNJH_00968 6.5e-154 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NIKODNJH_00969 4.1e-265 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NIKODNJH_00970 1.8e-93 S Protein of unknown function (DUF3180)
NIKODNJH_00971 4.3e-169 tesB I Thioesterase-like superfamily
NIKODNJH_00972 0.0 yjjK S ATP-binding cassette protein, ChvD family
NIKODNJH_00973 5.9e-182 V Beta-lactamase
NIKODNJH_00974 4.2e-74 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
NIKODNJH_00975 6.4e-103 ribD 1.1.1.193, 3.5.4.26 H Cytidine and deoxycytidylate deaminase zinc-binding region
NIKODNJH_00976 4.1e-155 L PFAM Integrase catalytic
NIKODNJH_00977 0.0 O Highly conserved protein containing a thioredoxin domain
NIKODNJH_00978 3.3e-235 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
NIKODNJH_00979 0.0 3.2.1.8 G Glycosyl hydrolase family 10
NIKODNJH_00980 1.9e-117 L Integrase core domain
NIKODNJH_00982 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
NIKODNJH_00983 1.2e-224 bdhA C Iron-containing alcohol dehydrogenase
NIKODNJH_00984 2.3e-167 F Inosine-uridine preferring nucleoside hydrolase
NIKODNJH_00985 4.6e-129 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
NIKODNJH_00986 5.9e-17 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
NIKODNJH_00987 5.3e-140 xylR GK ROK family
NIKODNJH_00988 7.6e-56 xylR GK ROK family
NIKODNJH_00989 5.8e-95 ykoE S ABC-type cobalt transport system, permease component
NIKODNJH_00990 1.3e-16 ydcZ S Putative inner membrane exporter, YdcZ
NIKODNJH_00991 3.4e-107 S Membrane
NIKODNJH_00992 1.3e-279 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
NIKODNJH_00993 3.5e-249 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
NIKODNJH_00994 3e-267 xylA 5.3.1.5 G Belongs to the xylose isomerase family
NIKODNJH_00995 0.0 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
NIKODNJH_00996 7.2e-189 K Bacterial regulatory proteins, lacI family
NIKODNJH_00997 8e-230 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
NIKODNJH_00998 1.3e-185 MA20_14025 U Binding-protein-dependent transport system inner membrane component
NIKODNJH_00999 2.3e-159 MA20_14020 P Binding-protein-dependent transport system inner membrane component
NIKODNJH_01000 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
NIKODNJH_01001 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
NIKODNJH_01002 2.8e-106 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
NIKODNJH_01003 1.3e-287 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
NIKODNJH_01004 6.8e-226 xylR GK ROK family
NIKODNJH_01006 1.5e-35 rpmE J Binds the 23S rRNA
NIKODNJH_01007 1.4e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NIKODNJH_01008 3.2e-172 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NIKODNJH_01009 7.8e-219 livK E Receptor family ligand binding region
NIKODNJH_01010 9.5e-156 U Belongs to the binding-protein-dependent transport system permease family
NIKODNJH_01011 1.5e-195 livM U Belongs to the binding-protein-dependent transport system permease family
NIKODNJH_01012 4.8e-151 E Branched-chain amino acid ATP-binding cassette transporter
NIKODNJH_01013 1.9e-124 livF E ATPases associated with a variety of cellular activities
NIKODNJH_01014 3.8e-114 ywlC 2.7.7.87 J Belongs to the SUA5 family
NIKODNJH_01015 8.4e-194 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
NIKODNJH_01016 2.2e-287 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
NIKODNJH_01017 3.1e-121 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
NIKODNJH_01018 7.2e-161 supH S Sucrose-6F-phosphate phosphohydrolase
NIKODNJH_01019 3e-270 recD2 3.6.4.12 L PIF1-like helicase
NIKODNJH_01020 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NIKODNJH_01021 1.8e-98 L Single-strand binding protein family
NIKODNJH_01022 0.0 pepO 3.4.24.71 O Peptidase family M13
NIKODNJH_01023 1.6e-151 map 3.4.11.18 E Methionine aminopeptidase
NIKODNJH_01024 5.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
NIKODNJH_01025 4.9e-142 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
NIKODNJH_01026 4e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NIKODNJH_01027 1.1e-190 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NIKODNJH_01028 2.3e-168 ftsE D Cell division ATP-binding protein FtsE
NIKODNJH_01029 3.4e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
NIKODNJH_01030 2.9e-148 usp 3.5.1.28 CBM50 D CHAP domain protein
NIKODNJH_01031 2e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NIKODNJH_01032 3.3e-156 pknD ET ABC transporter, substrate-binding protein, family 3
NIKODNJH_01033 8.9e-32 pknD ET ABC transporter, substrate-binding protein, family 3
NIKODNJH_01034 4.6e-150 pknD ET ABC transporter, substrate-binding protein, family 3
NIKODNJH_01035 8.3e-126 yecS E Binding-protein-dependent transport system inner membrane component
NIKODNJH_01036 8.5e-145 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
NIKODNJH_01037 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NIKODNJH_01038 7.2e-146 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
NIKODNJH_01039 5.3e-229 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
NIKODNJH_01040 1.4e-189 K Periplasmic binding protein domain
NIKODNJH_01041 4.6e-177 S Fic/DOC family
NIKODNJH_01042 1.1e-66
NIKODNJH_01043 2e-65
NIKODNJH_01044 1.5e-39
NIKODNJH_01045 0.0 topB 5.99.1.2 L DNA topoisomerase
NIKODNJH_01046 5.8e-52
NIKODNJH_01048 1.8e-31
NIKODNJH_01050 2.1e-44 S Domain of unknown function (DUF4160)
NIKODNJH_01051 2.5e-42 K Protein of unknown function (DUF2442)
NIKODNJH_01052 1.5e-43 S Bacterial mobilisation protein (MobC)
NIKODNJH_01053 2.9e-248 ltrBE1 U Relaxase/Mobilisation nuclease domain
NIKODNJH_01054 2.5e-131 S Protein of unknown function (DUF3801)
NIKODNJH_01055 6.8e-289
NIKODNJH_01056 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NIKODNJH_01057 2.5e-36
NIKODNJH_01058 9e-34
NIKODNJH_01059 0.0 U Type IV secretory system Conjugative DNA transfer
NIKODNJH_01061 8.4e-132
NIKODNJH_01062 2.9e-96
NIKODNJH_01063 1.1e-253 isp2 3.2.1.96 M CHAP domain
NIKODNJH_01064 0.0 trsE U type IV secretory pathway VirB4
NIKODNJH_01065 2.7e-63 S PrgI family protein
NIKODNJH_01066 5.3e-145
NIKODNJH_01067 5.2e-26
NIKODNJH_01069 0.0 D Cell surface antigen C-terminus
NIKODNJH_01070 4.1e-58
NIKODNJH_01072 3e-23
NIKODNJH_01073 3.1e-100 parA D AAA domain
NIKODNJH_01074 4.3e-86 S Transcription factor WhiB
NIKODNJH_01075 1.1e-42
NIKODNJH_01076 4.9e-194 S Helix-turn-helix domain
NIKODNJH_01077 1.1e-10
NIKODNJH_01078 6.1e-25
NIKODNJH_01079 4.7e-118
NIKODNJH_01080 6.8e-65
NIKODNJH_01082 4.3e-152 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NIKODNJH_01083 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NIKODNJH_01084 3.2e-83 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
NIKODNJH_01085 1e-47 S Domain of unknown function (DUF4193)
NIKODNJH_01086 1.2e-146 S Protein of unknown function (DUF3071)
NIKODNJH_01087 9.8e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
NIKODNJH_01088 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
NIKODNJH_01089 0.0 lhr L DEAD DEAH box helicase
NIKODNJH_01090 5.8e-32 yozG K Cro/C1-type HTH DNA-binding domain
NIKODNJH_01091 5.4e-79 S Protein of unknown function (DUF2975)
NIKODNJH_01092 2.5e-242 T PhoQ Sensor
NIKODNJH_01093 1.5e-222 G Major Facilitator Superfamily
NIKODNJH_01094 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
NIKODNJH_01095 9.7e-173 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NIKODNJH_01096 1.1e-118
NIKODNJH_01097 2e-197 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
NIKODNJH_01098 0.0 pknL 2.7.11.1 KLT PASTA
NIKODNJH_01099 5.6e-132 plsC2 2.3.1.51 I Phosphate acyltransferases
NIKODNJH_01100 1.3e-97
NIKODNJH_01101 3.4e-194 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NIKODNJH_01102 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NIKODNJH_01103 3.3e-118 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NIKODNJH_01104 1.7e-122 recX S Modulates RecA activity
NIKODNJH_01105 5.4e-212 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NIKODNJH_01106 3e-46 S Protein of unknown function (DUF3046)
NIKODNJH_01107 1.6e-80 K Helix-turn-helix XRE-family like proteins
NIKODNJH_01108 5.5e-98 cinA 3.5.1.42 S Belongs to the CinA family
NIKODNJH_01109 1.9e-124 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NIKODNJH_01110 0.0 ftsK D FtsK SpoIIIE family protein
NIKODNJH_01111 1.9e-192 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NIKODNJH_01112 1e-281 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NIKODNJH_01113 1.1e-155 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
NIKODNJH_01114 5.2e-176 ydeD EG EamA-like transporter family
NIKODNJH_01115 4.1e-126 ybhL S Belongs to the BI1 family
NIKODNJH_01116 2.3e-76 S Domain of unknown function (DUF5067)
NIKODNJH_01117 5.1e-243 T Histidine kinase
NIKODNJH_01118 1.8e-127 K helix_turn_helix, Lux Regulon
NIKODNJH_01119 0.0 S Protein of unknown function DUF262
NIKODNJH_01120 9e-116 K helix_turn_helix, Lux Regulon
NIKODNJH_01121 1e-243 T Histidine kinase
NIKODNJH_01122 4.4e-191 V ATPases associated with a variety of cellular activities
NIKODNJH_01123 1.1e-223 V ABC-2 family transporter protein
NIKODNJH_01124 4.4e-228 V ABC-2 family transporter protein
NIKODNJH_01125 2.2e-209 rhaR1 K helix_turn_helix, arabinose operon control protein
NIKODNJH_01126 5.2e-108 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
NIKODNJH_01127 9.9e-250 VP1224 V Psort location CytoplasmicMembrane, score 9.99
NIKODNJH_01128 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NIKODNJH_01129 0.0 ctpE P E1-E2 ATPase
NIKODNJH_01130 3.3e-98
NIKODNJH_01131 2.8e-243 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NIKODNJH_01132 7e-133 S Protein of unknown function (DUF3159)
NIKODNJH_01133 1.7e-151 S Protein of unknown function (DUF3710)
NIKODNJH_01134 1.4e-172 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
NIKODNJH_01135 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
NIKODNJH_01136 4.1e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
NIKODNJH_01137 1.6e-155 dppB EP Binding-protein-dependent transport system inner membrane component
NIKODNJH_01138 0.0 E ABC transporter, substrate-binding protein, family 5
NIKODNJH_01139 0.0 E ABC transporter, substrate-binding protein, family 5
NIKODNJH_01140 1.6e-171 xerC D Belongs to the 'phage' integrase family. XerC subfamily
NIKODNJH_01141 5.2e-08
NIKODNJH_01142 2.8e-34
NIKODNJH_01143 8.9e-195 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
NIKODNJH_01144 3.7e-190 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
NIKODNJH_01145 4e-104
NIKODNJH_01146 0.0 typA T Elongation factor G C-terminus
NIKODNJH_01147 1.7e-249 naiP U Sugar (and other) transporter
NIKODNJH_01148 2.1e-151 nrtR 3.6.1.55 F NUDIX hydrolase
NIKODNJH_01149 6.8e-153 soj D CobQ CobB MinD ParA nucleotide binding domain protein
NIKODNJH_01150 2e-177 xerD D recombinase XerD
NIKODNJH_01151 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NIKODNJH_01152 2.1e-25 rpmI J Ribosomal protein L35
NIKODNJH_01153 1.6e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NIKODNJH_01154 4.9e-110 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
NIKODNJH_01155 1.8e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NIKODNJH_01156 2.1e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NIKODNJH_01157 7.9e-172 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NIKODNJH_01158 4.3e-188 galM 5.1.3.3 G Aldose 1-epimerase
NIKODNJH_01159 1.2e-36
NIKODNJH_01160 7.4e-98 sigH K Belongs to the sigma-70 factor family. ECF subfamily
NIKODNJH_01161 6e-280 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NIKODNJH_01162 9.5e-186 V Acetyltransferase (GNAT) domain
NIKODNJH_01163 1.9e-289 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
NIKODNJH_01164 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
NIKODNJH_01165 9e-95 3.6.1.55 F NUDIX domain
NIKODNJH_01166 0.0 P Belongs to the ABC transporter superfamily
NIKODNJH_01167 4.7e-192 dppC EP Binding-protein-dependent transport system inner membrane component
NIKODNJH_01168 1.7e-188 dppB EP Binding-protein-dependent transport system inner membrane component
NIKODNJH_01169 6.1e-307 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
NIKODNJH_01170 1.9e-217 GK ROK family
NIKODNJH_01171 9.8e-166 2.7.1.4 G pfkB family carbohydrate kinase
NIKODNJH_01172 1.1e-218 S Metal-independent alpha-mannosidase (GH125)
NIKODNJH_01173 1.9e-28
NIKODNJH_01174 1.4e-247 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
NIKODNJH_01175 4.6e-141 ftsQ 6.3.2.4 D Cell division protein FtsQ
NIKODNJH_01176 1e-271 murC 6.3.2.8 M Belongs to the MurCDEF family
NIKODNJH_01177 6.3e-216 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NIKODNJH_01178 8.1e-203 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
NIKODNJH_01179 2.5e-256 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NIKODNJH_01180 1.5e-192 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NIKODNJH_01181 3.8e-263 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NIKODNJH_01182 2.1e-152 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NIKODNJH_01183 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
NIKODNJH_01184 1.8e-62 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NIKODNJH_01185 9.5e-189 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NIKODNJH_01186 7e-92 mraZ K Belongs to the MraZ family
NIKODNJH_01187 0.0 L DNA helicase
NIKODNJH_01188 1.9e-217 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NIKODNJH_01189 2.9e-84 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NIKODNJH_01190 1e-53 M Lysin motif
NIKODNJH_01191 2.2e-131 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NIKODNJH_01192 1.3e-149 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NIKODNJH_01193 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
NIKODNJH_01194 1.1e-270 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NIKODNJH_01195 2.9e-113 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
NIKODNJH_01196 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
NIKODNJH_01197 1.2e-194
NIKODNJH_01198 8.6e-185 V N-Acetylmuramoyl-L-alanine amidase
NIKODNJH_01199 3.4e-83
NIKODNJH_01200 5.4e-57 T helix_turn_helix, Lux Regulon
NIKODNJH_01201 1.9e-28 2.7.13.3 T Histidine kinase
NIKODNJH_01202 6.5e-119 ytrE V ATPases associated with a variety of cellular activities
NIKODNJH_01203 2.8e-216 EGP Major facilitator Superfamily
NIKODNJH_01204 1.2e-137 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
NIKODNJH_01205 5.6e-219 S Domain of unknown function (DUF5067)
NIKODNJH_01206 2e-263 glnA2 6.3.1.2 E glutamine synthetase
NIKODNJH_01207 1.4e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
NIKODNJH_01208 6.3e-122 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NIKODNJH_01209 1.5e-120
NIKODNJH_01210 1.5e-109 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
NIKODNJH_01211 2.5e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NIKODNJH_01212 5.3e-259 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NIKODNJH_01213 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
NIKODNJH_01214 4.9e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
NIKODNJH_01215 9.5e-87 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NIKODNJH_01216 4.5e-31 3.1.21.3 V DivIVA protein
NIKODNJH_01217 1.2e-40 yggT S YGGT family
NIKODNJH_01218 8.9e-81 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
NIKODNJH_01219 5.6e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NIKODNJH_01220 5e-245 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NIKODNJH_01221 1.3e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
NIKODNJH_01222 1e-105 S Pilus assembly protein, PilO
NIKODNJH_01223 8.1e-166 pilN NU PFAM Fimbrial assembly family protein
NIKODNJH_01224 3e-190 pilM NU Type IV pilus assembly protein PilM;
NIKODNJH_01225 5.3e-150 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
NIKODNJH_01226 0.0
NIKODNJH_01227 4.7e-230 pilC U Type II secretion system (T2SS), protein F
NIKODNJH_01228 1.8e-40 pilA NU Prokaryotic N-terminal methylation motif
NIKODNJH_01229 1.6e-104 S Prokaryotic N-terminal methylation motif
NIKODNJH_01230 4.9e-137 ppdC NU Prokaryotic N-terminal methylation motif
NIKODNJH_01231 0.0 pulE NU Type II/IV secretion system protein
NIKODNJH_01232 0.0 pilT NU Type II/IV secretion system protein
NIKODNJH_01233 0.0
NIKODNJH_01234 9.9e-155 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NIKODNJH_01235 3.2e-133 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
NIKODNJH_01236 1.2e-149 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
NIKODNJH_01237 3e-60 S Thiamine-binding protein
NIKODNJH_01238 5.4e-192 K helix_turn _helix lactose operon repressor
NIKODNJH_01239 2.8e-241 lacY P LacY proton/sugar symporter
NIKODNJH_01240 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
NIKODNJH_01241 2.5e-142 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
NIKODNJH_01242 5.3e-206 P NMT1/THI5 like
NIKODNJH_01243 7.1e-218 iunH1 3.2.2.1 F nucleoside hydrolase
NIKODNJH_01244 4e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NIKODNJH_01245 7.3e-135 recO L Involved in DNA repair and RecF pathway recombination
NIKODNJH_01246 0.0 I acetylesterase activity
NIKODNJH_01247 5.6e-225 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NIKODNJH_01248 3.2e-217 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
NIKODNJH_01249 6e-235 2.7.11.1 NU Tfp pilus assembly protein FimV
NIKODNJH_01251 6.5e-75 S Protein of unknown function (DUF3052)
NIKODNJH_01252 1e-154 lon T Belongs to the peptidase S16 family
NIKODNJH_01253 1.6e-283 S Zincin-like metallopeptidase
NIKODNJH_01254 1.6e-282 uvrD2 3.6.4.12 L DNA helicase
NIKODNJH_01255 3.6e-269 mphA S Aminoglycoside phosphotransferase
NIKODNJH_01256 3.6e-32 S Protein of unknown function (DUF3107)
NIKODNJH_01257 5e-173 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
NIKODNJH_01258 1.2e-115 S Vitamin K epoxide reductase
NIKODNJH_01259 2.5e-169 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
NIKODNJH_01260 2.2e-145 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
NIKODNJH_01261 7.9e-21 S Patatin-like phospholipase
NIKODNJH_01262 7.8e-302 E ABC transporter, substrate-binding protein, family 5
NIKODNJH_01263 4.9e-176 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
NIKODNJH_01264 2.9e-159 S Patatin-like phospholipase
NIKODNJH_01265 3.9e-187 K LysR substrate binding domain protein
NIKODNJH_01266 3.1e-239 patB 4.4.1.8 E Aminotransferase, class I II
NIKODNJH_01267 1.1e-118 S Phospholipase/Carboxylesterase
NIKODNJH_01268 7.1e-12
NIKODNJH_01269 1.4e-14
NIKODNJH_01270 3.3e-54 L IstB-like ATP binding protein
NIKODNJH_01271 1.1e-74 L PFAM Integrase catalytic
NIKODNJH_01272 3.2e-119 L PFAM Integrase catalytic
NIKODNJH_01273 3.3e-33 ligA 2.7.7.7, 6.5.1.2 L EXOIII
NIKODNJH_01274 9.6e-47 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
NIKODNJH_01275 2.4e-92 I PLD-like domain
NIKODNJH_01276 2.5e-311 S Domain of unknown function (DUF1998)
NIKODNJH_01277 0.0 L Helicase conserved C-terminal domain
NIKODNJH_01278 0.0 resA 3.1.21.5 KL Type III restriction enzyme, res subunit
NIKODNJH_01279 1.5e-167 2.1.1.72 L DNA methylase
NIKODNJH_01280 0.0 snf2 2.1.1.72 L SNF2 family N-terminal domain
NIKODNJH_01281 2.3e-216 dcm 2.1.1.37 L C-5 cytosine-specific DNA methylase
NIKODNJH_01282 2.3e-30 K Cro/C1-type HTH DNA-binding domain
NIKODNJH_01283 7.1e-98 S Uncharacterised protein conserved in bacteria (DUF2326)
NIKODNJH_01284 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NIKODNJH_01285 1e-257 lacS G Psort location CytoplasmicMembrane, score 10.00
NIKODNJH_01286 2.6e-183 lacR K Transcriptional regulator, LacI family
NIKODNJH_01287 0.0 V ABC transporter transmembrane region
NIKODNJH_01288 0.0 V ABC transporter, ATP-binding protein
NIKODNJH_01289 1.3e-96 K MarR family
NIKODNJH_01290 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
NIKODNJH_01291 2.8e-105 K Bacterial regulatory proteins, tetR family
NIKODNJH_01292 1.4e-199 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
NIKODNJH_01293 2.9e-182 G Transporter major facilitator family protein
NIKODNJH_01294 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
NIKODNJH_01295 4.8e-214 EGP Major facilitator Superfamily
NIKODNJH_01296 6.8e-118 K Periplasmic binding protein domain
NIKODNJH_01297 4.3e-14 K helix_turn_helix, mercury resistance
NIKODNJH_01298 1e-220 lmrB U Major Facilitator Superfamily
NIKODNJH_01299 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
NIKODNJH_01300 8.1e-219 P Major Facilitator Superfamily
NIKODNJH_01301 2e-227 hsvB 6.3.2.4 M Belongs to the D-alanine--D-alanine ligase family
NIKODNJH_01302 4.1e-109 K Bacterial regulatory proteins, tetR family
NIKODNJH_01303 2.6e-238 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
NIKODNJH_01304 8.2e-259 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
NIKODNJH_01305 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
NIKODNJH_01306 2.6e-155 hgdC I BadF/BadG/BcrA/BcrD ATPase family
NIKODNJH_01307 4.8e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NIKODNJH_01308 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
NIKODNJH_01309 8.9e-245 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NIKODNJH_01310 3.5e-40 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NIKODNJH_01312 3.7e-199 S Endonuclease/Exonuclease/phosphatase family
NIKODNJH_01313 2.3e-27 V ATPases associated with a variety of cellular activities
NIKODNJH_01314 4.9e-23
NIKODNJH_01315 1.3e-99 tmp1 S Domain of unknown function (DUF4391)
NIKODNJH_01316 3e-168 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
NIKODNJH_01317 1.1e-233 aspB E Aminotransferase class-V
NIKODNJH_01318 1.9e-70 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
NIKODNJH_01319 1.3e-182 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
NIKODNJH_01320 0.0 helD 3.6.4.12 L Psort location Cytoplasmic, score 8.87
NIKODNJH_01321 5.5e-200 V Domain of unknown function (DUF3427)
NIKODNJH_01322 1.5e-76
NIKODNJH_01323 7.5e-71 S Bacterial PH domain
NIKODNJH_01324 6.7e-248 S zinc finger
NIKODNJH_01325 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NIKODNJH_01326 2e-197 K helix_turn _helix lactose operon repressor
NIKODNJH_01327 2.1e-241 mntH P H( )-stimulated, divalent metal cation uptake system
NIKODNJH_01328 2.1e-165 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
NIKODNJH_01329 2.3e-126 L Protein of unknown function (DUF1524)
NIKODNJH_01330 2.9e-243 T Diguanylate cyclase (GGDEF) domain protein
NIKODNJH_01331 6.2e-285 EGP Major facilitator Superfamily
NIKODNJH_01332 2.5e-47
NIKODNJH_01333 9.3e-189 S Endonuclease/Exonuclease/phosphatase family
NIKODNJH_01334 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
NIKODNJH_01335 0.0 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
NIKODNJH_01336 1.4e-197
NIKODNJH_01341 1.6e-50
NIKODNJH_01342 3e-11 L Transposase, Mutator family
NIKODNJH_01343 2.8e-30 L Transposase, Mutator family
NIKODNJH_01344 1.7e-43 S Bacteriophage abortive infection AbiH
NIKODNJH_01347 9.4e-61 1.13.11.79 C Psort location Cytoplasmic, score 8.87
NIKODNJH_01348 3e-225 1.12.98.1 C Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
NIKODNJH_01349 1.8e-220 S Polysaccharide biosynthesis protein
NIKODNJH_01350 5.1e-111 S Polysaccharide pyruvyl transferase
NIKODNJH_01351 1.2e-35 S EpsG family
NIKODNJH_01352 1.6e-177 M Glycosyl transferase, family 2
NIKODNJH_01353 1.9e-172 MA20_43635 M Capsular polysaccharide synthesis protein
NIKODNJH_01354 1.1e-147 cps1D M Domain of unknown function (DUF4422)
NIKODNJH_01355 1.5e-155 M Psort location Cytoplasmic, score 8.87
NIKODNJH_01356 1.7e-215 M Domain of unknown function (DUF1972)
NIKODNJH_01357 2.8e-217 M Glycosyl transferase 4-like domain
NIKODNJH_01358 2.9e-51 M Glycosyl transferases group 1
NIKODNJH_01359 1.8e-91 epsJ GT2 S Glycosyltransferase, group 2 family protein
NIKODNJH_01360 1.4e-96 S Psort location CytoplasmicMembrane, score
NIKODNJH_01361 1.5e-85 M Glycosyltransferase like family 2
NIKODNJH_01362 4.6e-124
NIKODNJH_01363 2.2e-83 S Hexapeptide repeat of succinyl-transferase
NIKODNJH_01364 1.6e-128 S Psort location CytoplasmicMembrane, score 9.99
NIKODNJH_01365 2.2e-57 2.7.8.12 M Glycosyltransferase like family 2
NIKODNJH_01366 5.8e-72 L PFAM Integrase catalytic
NIKODNJH_01367 5.4e-34 L Transposase
NIKODNJH_01368 0.0 C Domain of unknown function (DUF4365)
NIKODNJH_01369 8.1e-51 S Bacteriophage abortive infection AbiH
NIKODNJH_01370 3.3e-18
NIKODNJH_01371 7.2e-89 gepA S Protein of unknown function (DUF4065)
NIKODNJH_01372 1.1e-73 doc S Fic/DOC family
NIKODNJH_01373 9.4e-125 S Psort location CytoplasmicMembrane, score 9.99
NIKODNJH_01374 2.5e-64 S Psort location CytoplasmicMembrane, score 9.99
NIKODNJH_01375 4.4e-56 yccF S Inner membrane component domain
NIKODNJH_01376 0.0 3.2.1.177 GH31 G Belongs to the glycosyl hydrolase 31 family
NIKODNJH_01377 2.5e-144 G Binding-protein-dependent transport system inner membrane component
NIKODNJH_01378 6.7e-162 G PFAM binding-protein-dependent transport systems inner membrane component
NIKODNJH_01379 1.1e-222 G Bacterial extracellular solute-binding protein
NIKODNJH_01380 2.9e-182 K helix_turn _helix lactose operon repressor
NIKODNJH_01381 1.4e-184 K Psort location Cytoplasmic, score
NIKODNJH_01382 9.5e-269 G Bacterial extracellular solute-binding protein
NIKODNJH_01383 1.4e-161 P Binding-protein-dependent transport system inner membrane component
NIKODNJH_01384 6.5e-148 P Binding-protein-dependent transport system inner membrane component
NIKODNJH_01385 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
NIKODNJH_01386 5.5e-246 wcoI DM Psort location CytoplasmicMembrane, score
NIKODNJH_01387 8.3e-96 3.1.3.48 T Low molecular weight phosphatase family
NIKODNJH_01388 6.5e-74
NIKODNJH_01389 1.6e-28 K Cro/C1-type HTH DNA-binding domain
NIKODNJH_01390 2.5e-71
NIKODNJH_01391 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
NIKODNJH_01392 1.8e-158 cps1D M Domain of unknown function (DUF4422)
NIKODNJH_01393 1.1e-189 2.4.1.166 GT2 M Glycosyltransferase like family 2
NIKODNJH_01394 4.6e-255 S Psort location CytoplasmicMembrane, score 9.99
NIKODNJH_01395 1.7e-285 S Psort location CytoplasmicMembrane, score 9.99
NIKODNJH_01396 1.4e-206 wbbI M transferase activity, transferring glycosyl groups
NIKODNJH_01397 3.9e-190 1.13.11.79 C Psort location Cytoplasmic, score 8.87
NIKODNJH_01398 2.3e-209 GT2 M Glycosyltransferase like family 2
NIKODNJH_01399 6.6e-223 C Polysaccharide pyruvyl transferase
NIKODNJH_01400 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
NIKODNJH_01401 2.1e-88
NIKODNJH_01402 5.6e-170 S G5
NIKODNJH_01403 6e-61 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
NIKODNJH_01404 1.7e-113 F Domain of unknown function (DUF4916)
NIKODNJH_01405 8.4e-159 mhpC I Alpha/beta hydrolase family
NIKODNJH_01406 9.6e-208 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
NIKODNJH_01407 1e-69 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
NIKODNJH_01408 9.5e-236 S Uncharacterized conserved protein (DUF2183)
NIKODNJH_01409 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
NIKODNJH_01410 8.4e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
NIKODNJH_01411 7.5e-79 J TM2 domain
NIKODNJH_01412 1.7e-215 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
NIKODNJH_01413 5.2e-133 glxR K helix_turn_helix, cAMP Regulatory protein
NIKODNJH_01414 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
NIKODNJH_01415 1.4e-220 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
NIKODNJH_01416 8.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
NIKODNJH_01417 3.4e-141 glpR K DeoR C terminal sensor domain
NIKODNJH_01418 8.9e-250 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
NIKODNJH_01419 9e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
NIKODNJH_01420 1.1e-23 lmrB EGP Major facilitator Superfamily
NIKODNJH_01421 7.1e-43 gcvR T Belongs to the UPF0237 family
NIKODNJH_01422 7.2e-253 S UPF0210 protein
NIKODNJH_01423 3.3e-126 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NIKODNJH_01424 1e-181 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
NIKODNJH_01425 1.5e-99
NIKODNJH_01426 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NIKODNJH_01427 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NIKODNJH_01428 1.1e-101 T Forkhead associated domain
NIKODNJH_01429 4.8e-104 B Belongs to the OprB family
NIKODNJH_01430 9.9e-163 3.1.3.16 T Sigma factor PP2C-like phosphatases
NIKODNJH_01431 0.0 E Transglutaminase-like superfamily
NIKODNJH_01432 4.1e-220 S Protein of unknown function DUF58
NIKODNJH_01433 2.7e-226 S ATPase family associated with various cellular activities (AAA)
NIKODNJH_01434 0.0 S Fibronectin type 3 domain
NIKODNJH_01435 3.2e-259 KLT Protein tyrosine kinase
NIKODNJH_01436 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
NIKODNJH_01437 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
NIKODNJH_01438 8.8e-243 G Major Facilitator Superfamily
NIKODNJH_01439 4.1e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NIKODNJH_01440 1.1e-38 csoR S Metal-sensitive transcriptional repressor
NIKODNJH_01441 0.0 pacS 3.6.3.54 P E1-E2 ATPase
NIKODNJH_01442 9.5e-175 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NIKODNJH_01443 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NIKODNJH_01444 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
NIKODNJH_01445 2.3e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NIKODNJH_01446 9.5e-110 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NIKODNJH_01447 5.5e-289 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
NIKODNJH_01448 1.8e-30 yuxJ EGP Major facilitator Superfamily
NIKODNJH_01449 1.1e-70 EGP Major facilitator Superfamily
NIKODNJH_01450 4.3e-66 EGP Major facilitator Superfamily
NIKODNJH_01452 5.9e-120 L Phage integrase, N-terminal SAM-like domain
NIKODNJH_01453 1.9e-10
NIKODNJH_01454 2.1e-101
NIKODNJH_01459 0.0 V Type II restriction enzyme, methylase subunits
NIKODNJH_01461 3.3e-28 S Bacterial mobilisation protein (MobC)
NIKODNJH_01462 1.1e-150 ltrBE1 U Relaxase/Mobilisation nuclease domain
NIKODNJH_01463 7.1e-16
NIKODNJH_01464 5.2e-43 K Cro/C1-type HTH DNA-binding domain
NIKODNJH_01465 6.1e-16 S BrnA antitoxin of type II toxin-antitoxin system
NIKODNJH_01466 2.6e-25 S Ribonuclease toxin, BrnT, of type II toxin-antitoxin system
NIKODNJH_01468 2.1e-58
NIKODNJH_01469 1.2e-297 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
NIKODNJH_01470 3e-10
NIKODNJH_01471 1.9e-69
NIKODNJH_01472 1.2e-258 S AAA domain
NIKODNJH_01473 2.1e-293 lytC 2.1.1.197, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
NIKODNJH_01474 1.2e-161 rfbJ M Glycosyl transferase family 2
NIKODNJH_01475 7e-19 E Carbohydrate esterase, sialic acid-specific acetylesterase
NIKODNJH_01476 1.1e-169 S Acyltransferase family
NIKODNJH_01477 3.7e-251
NIKODNJH_01478 0.0 wbbM M Glycosyl transferase family 8
NIKODNJH_01479 5.8e-172 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
NIKODNJH_01480 4.1e-134 rgpC U Transport permease protein
NIKODNJH_01481 0.0 wbbM M Glycosyl transferase family 8
NIKODNJH_01482 3.3e-204 1.1.1.22 M UDP binding domain
NIKODNJH_01483 1.5e-307 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
NIKODNJH_01484 1.6e-255 S Domain of unknown function (DUF4143)
NIKODNJH_01485 1.4e-203 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NIKODNJH_01486 1.2e-61
NIKODNJH_01487 1.1e-197 K helix_turn _helix lactose operon repressor
NIKODNJH_01488 7.2e-167 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
NIKODNJH_01489 1.1e-259 EGP Major Facilitator Superfamily
NIKODNJH_01490 1.3e-174 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NIKODNJH_01491 6.2e-185 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NIKODNJH_01492 2.5e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
NIKODNJH_01493 3.8e-66 ssb1 L Single-stranded DNA-binding protein
NIKODNJH_01494 3.5e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NIKODNJH_01495 1.7e-70 rplI J Binds to the 23S rRNA
NIKODNJH_01497 4e-125 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
NIKODNJH_01498 4.2e-09 M Protein of unknown function (DUF3152)
NIKODNJH_01499 2.6e-54 M Protein of unknown function (DUF3152)
NIKODNJH_01500 7.4e-211 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
NIKODNJH_01501 1.2e-79
NIKODNJH_01502 1.1e-147 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NIKODNJH_01503 1.4e-164 fahA Q Fumarylacetoacetate (FAA) hydrolase family
NIKODNJH_01504 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NIKODNJH_01505 2.6e-134 3.6.3.3, 3.6.3.5, 3.6.3.54 P Heavy metal translocating P-type atpase
NIKODNJH_01506 7e-168 rmuC S RmuC family
NIKODNJH_01507 1.7e-103 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NIKODNJH_01508 3.1e-133 spoU 2.1.1.185 J RNA methyltransferase TrmH family
NIKODNJH_01509 6.2e-134 K Psort location Cytoplasmic, score
NIKODNJH_01510 1.3e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NIKODNJH_01511 8.6e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NIKODNJH_01512 8.7e-284 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NIKODNJH_01513 4.5e-205 2.3.1.57 J Acetyltransferase (GNAT) domain
NIKODNJH_01514 2.1e-51 S Protein of unknown function (DUF2469)
NIKODNJH_01515 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
NIKODNJH_01516 1.9e-247 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NIKODNJH_01517 3.7e-79 K helix_turn_helix ASNC type
NIKODNJH_01518 1e-69 tyrA 5.4.99.5 E Chorismate mutase type II
NIKODNJH_01519 0.0 S domain protein
NIKODNJH_01520 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NIKODNJH_01521 7.8e-288 E Bacterial extracellular solute-binding proteins, family 5 Middle
NIKODNJH_01522 2.7e-122 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NIKODNJH_01523 4.9e-134 KT Transcriptional regulatory protein, C terminal
NIKODNJH_01524 4.9e-134
NIKODNJH_01525 1.5e-92 mntP P Probably functions as a manganese efflux pump
NIKODNJH_01526 9.7e-91 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NIKODNJH_01527 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
NIKODNJH_01528 3.5e-174 M LPXTG-motif cell wall anchor domain protein
NIKODNJH_01529 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
NIKODNJH_01530 2.2e-191 yfdV S Membrane transport protein
NIKODNJH_01531 5e-273 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
NIKODNJH_01533 9.4e-10 K BetR domain
NIKODNJH_01536 4.3e-45
NIKODNJH_01537 2.1e-26
NIKODNJH_01538 4.2e-127 L HNH endonuclease
NIKODNJH_01539 7.5e-49
NIKODNJH_01540 2.4e-270 S Terminase
NIKODNJH_01541 6.6e-204 S Phage portal protein
NIKODNJH_01542 3.9e-242 S Caudovirus prohead serine protease
NIKODNJH_01543 4.2e-12
NIKODNJH_01545 5.2e-40
NIKODNJH_01546 5.3e-44
NIKODNJH_01547 4.7e-62
NIKODNJH_01548 7.2e-55
NIKODNJH_01549 9.2e-09
NIKODNJH_01550 1.2e-166 E phage tail tape measure protein
NIKODNJH_01551 1.5e-06
NIKODNJH_01553 3.8e-24
NIKODNJH_01554 2.7e-75 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
NIKODNJH_01555 4e-11 xhlB S SPP1 phage holin
NIKODNJH_01556 1.2e-90 L Phage integrase family
NIKODNJH_01558 4.5e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NIKODNJH_01559 2e-146 atpB C it plays a direct role in the translocation of protons across the membrane
NIKODNJH_01560 8.9e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NIKODNJH_01561 4.4e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NIKODNJH_01562 5e-148 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NIKODNJH_01563 3.8e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NIKODNJH_01564 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NIKODNJH_01565 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NIKODNJH_01566 2.3e-44 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
NIKODNJH_01567 2.3e-122 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
NIKODNJH_01568 6.8e-149 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
NIKODNJH_01569 4.8e-195
NIKODNJH_01570 2.7e-180
NIKODNJH_01571 1.9e-170 trxA2 O Tetratricopeptide repeat
NIKODNJH_01572 4.7e-122 cyaA 4.6.1.1 S CYTH
NIKODNJH_01574 7e-60 psp1 3.5.99.10 J Endoribonuclease L-PSP
NIKODNJH_01575 1.3e-271 mmuP E amino acid
NIKODNJH_01576 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
NIKODNJH_01577 2.5e-297 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NIKODNJH_01578 1.6e-241 hom 1.1.1.3 E Homoserine dehydrogenase
NIKODNJH_01579 1.4e-189 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
NIKODNJH_01580 5.3e-286 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
NIKODNJH_01581 2.1e-210 K helix_turn _helix lactose operon repressor
NIKODNJH_01582 0.0 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
NIKODNJH_01583 1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
NIKODNJH_01584 1.8e-297 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
NIKODNJH_01586 1.3e-149 rihB 3.2.2.1, 3.2.2.8 F Inosine-uridine preferring nucleoside hydrolase
NIKODNJH_01587 1.4e-131 K helix_turn _helix lactose operon repressor
NIKODNJH_01588 1e-97 EGP Major facilitator Superfamily
NIKODNJH_01589 1.2e-205 EGP Sugar (and other) transporter
NIKODNJH_01590 1.5e-15 EGP Major facilitator Superfamily
NIKODNJH_01591 2.5e-78 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
NIKODNJH_01592 1.8e-76 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
NIKODNJH_01593 0.0 fadD 6.2.1.3 I AMP-binding enzyme
NIKODNJH_01594 0.0 cydD V ABC transporter transmembrane region
NIKODNJH_01595 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
NIKODNJH_01596 3e-128 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
NIKODNJH_01597 9.1e-240 G Bacterial extracellular solute-binding protein
NIKODNJH_01599 2e-17 L DNA integration
NIKODNJH_01600 1.9e-26
NIKODNJH_01601 9.6e-146 fic D Fic/DOC family
NIKODNJH_01602 2e-239 L Phage integrase family
NIKODNJH_01603 6e-247 dinF V MatE
NIKODNJH_01604 0.0 S LPXTG-motif cell wall anchor domain protein
NIKODNJH_01606 3.3e-37 L Helix-turn-helix domain
NIKODNJH_01607 1.8e-101 V Abi-like protein
NIKODNJH_01608 3.9e-16 S Psort location Cytoplasmic, score 8.87
NIKODNJH_01609 6.9e-74
NIKODNJH_01610 9.3e-100 metI P Binding-protein-dependent transport system inner membrane component
NIKODNJH_01611 5.5e-147 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NIKODNJH_01612 1.9e-147 metQ P NLPA lipoprotein
NIKODNJH_01613 4.8e-156 S Sucrose-6F-phosphate phosphohydrolase
NIKODNJH_01614 1.8e-225 S Peptidase dimerisation domain
NIKODNJH_01615 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NIKODNJH_01616 4.5e-31
NIKODNJH_01617 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
NIKODNJH_01618 2.1e-165 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NIKODNJH_01619 9.9e-80 S Protein of unknown function (DUF3000)
NIKODNJH_01620 2e-236 rnd 3.1.13.5 J 3'-5' exonuclease
NIKODNJH_01621 1.2e-231 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
NIKODNJH_01622 4.8e-134 yebE S DUF218 domain
NIKODNJH_01623 2.2e-128 E Psort location Cytoplasmic, score 8.87
NIKODNJH_01624 2.3e-166 C Aldo/keto reductase family
NIKODNJH_01625 1.4e-71 4.1.1.44 S Cupin domain
NIKODNJH_01626 1.8e-41 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NIKODNJH_01627 2.7e-154 S phosphoesterase or phosphohydrolase
NIKODNJH_01629 3.9e-127 XK26_04895
NIKODNJH_01630 0.0 KL Type III restriction enzyme res subunit
NIKODNJH_01631 6.6e-55 L Eco57I restriction-modification methylase
NIKODNJH_01632 3e-55 L Eco57I restriction-modification methylase
NIKODNJH_01633 4.9e-179 3.1.21.4 V Type III restriction enzyme res subunit
NIKODNJH_01635 1.1e-137 L AAA ATPase domain
NIKODNJH_01636 2.8e-28
NIKODNJH_01638 9.9e-36
NIKODNJH_01639 1.2e-123 3.2.1.8 S alpha beta
NIKODNJH_01640 2.3e-84 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NIKODNJH_01641 3.8e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NIKODNJH_01642 1.3e-107 kcsA U Ion channel
NIKODNJH_01643 5.1e-39 pepC 3.4.22.40 E homocysteine catabolic process
NIKODNJH_01644 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
NIKODNJH_01645 8.8e-108 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NIKODNJH_01646 0.0 ecfA GP ABC transporter, ATP-binding protein
NIKODNJH_01647 2.4e-47 yhbY J CRS1_YhbY
NIKODNJH_01648 1.4e-144 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NIKODNJH_01649 6.3e-201 S Glycosyltransferase, group 2 family protein
NIKODNJH_01650 1.6e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
NIKODNJH_01651 8.1e-221 E Aminotransferase class I and II
NIKODNJH_01652 5e-145 bioM P ATPases associated with a variety of cellular activities
NIKODNJH_01653 6.2e-307 2.8.2.22 S Arylsulfotransferase Ig-like domain
NIKODNJH_01654 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NIKODNJH_01655 0.0 S Tetratricopeptide repeat
NIKODNJH_01656 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NIKODNJH_01657 2.1e-202 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
NIKODNJH_01658 6.4e-84 ykoE S ABC-type cobalt transport system, permease component
NIKODNJH_01659 3.1e-265 ykoD P ATPases associated with a variety of cellular activities
NIKODNJH_01660 3.1e-145 cbiQ P Cobalt transport protein
NIKODNJH_01661 4.2e-253 argE E Peptidase dimerisation domain
NIKODNJH_01662 3.6e-93 S Protein of unknown function (DUF3043)
NIKODNJH_01663 1.7e-247 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NIKODNJH_01664 8.6e-142 S Domain of unknown function (DUF4191)
NIKODNJH_01665 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
NIKODNJH_01666 1.3e-93 yvdD 3.2.2.10 S Possible lysine decarboxylase
NIKODNJH_01668 2.4e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NIKODNJH_01669 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
NIKODNJH_01670 4.9e-99
NIKODNJH_01671 4.1e-206 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NIKODNJH_01672 1.9e-217 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NIKODNJH_01673 2.4e-178 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
NIKODNJH_01674 2.7e-241 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
NIKODNJH_01675 4.6e-185 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NIKODNJH_01676 2.3e-82 argR K Regulates arginine biosynthesis genes
NIKODNJH_01677 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
NIKODNJH_01678 1.3e-279 argH 4.3.2.1 E argininosuccinate lyase
NIKODNJH_01679 9.7e-94 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
NIKODNJH_01680 8.6e-137 S Putative ABC-transporter type IV
NIKODNJH_01681 0.0 S Protein of unknown function (DUF975)
NIKODNJH_01682 1.4e-250 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NIKODNJH_01683 1.5e-149 L Tetratricopeptide repeat
NIKODNJH_01684 1.2e-191 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
NIKODNJH_01685 2.9e-134 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
NIKODNJH_01686 3e-116 trkA P TrkA-N domain
NIKODNJH_01687 2.2e-263 trkB P Cation transport protein
NIKODNJH_01688 2e-177 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NIKODNJH_01689 6.2e-262 recN L May be involved in recombinational repair of damaged DNA
NIKODNJH_01690 1.3e-122 S Haloacid dehalogenase-like hydrolase
NIKODNJH_01691 4.8e-115 S ABC-2 family transporter protein
NIKODNJH_01692 2.3e-173 V ATPases associated with a variety of cellular activities
NIKODNJH_01693 1.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
NIKODNJH_01694 1.1e-23 C Acetamidase/Formamidase family
NIKODNJH_01695 6e-44 L transposition
NIKODNJH_01696 0.0 S Histidine phosphatase superfamily (branch 2)
NIKODNJH_01697 1.1e-95 S Pyridoxamine 5'-phosphate oxidase
NIKODNJH_01698 1.6e-23 S Psort location Cytoplasmic, score 8.87
NIKODNJH_01699 1.4e-95 bcp 1.11.1.15 O Redoxin
NIKODNJH_01700 5.6e-56 3.4.13.22 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NIKODNJH_01701 1.3e-165 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NIKODNJH_01702 6.9e-164 IQ Enoyl-(Acyl carrier protein) reductase
NIKODNJH_01703 2.9e-141
NIKODNJH_01704 7.4e-174 G Fic/DOC family
NIKODNJH_01705 5.6e-106 3.1.3.27 E haloacid dehalogenase-like hydrolase
NIKODNJH_01706 4.6e-233 EGP Major facilitator Superfamily
NIKODNJH_01707 2.1e-285 thrC 4.2.3.1 E Threonine synthase N terminus
NIKODNJH_01708 6.5e-251 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NIKODNJH_01709 6.5e-243 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NIKODNJH_01710 3.2e-101
NIKODNJH_01711 1.8e-141 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NIKODNJH_01712 5e-190 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NIKODNJH_01714 5.8e-12
NIKODNJH_01717 2.5e-60 ydhQ 2.7.11.1 MU cell adhesion
NIKODNJH_01722 2.2e-57 S Helix-turn-helix domain
NIKODNJH_01725 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
NIKODNJH_01726 0.0 KLT Protein tyrosine kinase
NIKODNJH_01727 3.7e-150 O Thioredoxin
NIKODNJH_01729 2.8e-197 S G5
NIKODNJH_01730 7.8e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NIKODNJH_01731 1.1e-167 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NIKODNJH_01732 2.6e-109 S LytR cell envelope-related transcriptional attenuator
NIKODNJH_01733 6.5e-284 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
NIKODNJH_01734 6.3e-122 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
NIKODNJH_01735 0.0 M Conserved repeat domain
NIKODNJH_01736 4.1e-306 murJ KLT MviN-like protein
NIKODNJH_01737 0.0 murJ KLT MviN-like protein
NIKODNJH_01738 4e-13 S Domain of unknown function (DUF4143)
NIKODNJH_01739 8.9e-121 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
NIKODNJH_01741 9.1e-14 S Psort location Extracellular, score 8.82
NIKODNJH_01742 3.1e-181 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NIKODNJH_01743 2.3e-203 parB K Belongs to the ParB family
NIKODNJH_01744 4.5e-172 parA D CobQ CobB MinD ParA nucleotide binding domain protein
NIKODNJH_01745 1.8e-126 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
NIKODNJH_01746 3.6e-91 jag S Putative single-stranded nucleic acids-binding domain
NIKODNJH_01747 3.9e-190 yidC U Membrane protein insertase, YidC Oxa1 family
NIKODNJH_01748 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
NIKODNJH_01749 3.1e-306 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NIKODNJH_01750 1e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NIKODNJH_01751 1.3e-235 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NIKODNJH_01752 6.2e-90 S Protein of unknown function (DUF721)
NIKODNJH_01753 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NIKODNJH_01754 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NIKODNJH_01755 3.3e-68 S Transmembrane domain of unknown function (DUF3566)
NIKODNJH_01756 1.2e-260 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
NIKODNJH_01757 2.9e-58 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
NIKODNJH_01761 3.1e-101 S Protein of unknown function DUF45
NIKODNJH_01762 5.9e-188 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
NIKODNJH_01763 2.3e-240 ytfL P Transporter associated domain
NIKODNJH_01764 2e-118 cah 4.2.1.1 P Reversible hydration of carbon dioxide
NIKODNJH_01765 1.1e-38
NIKODNJH_01766 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NIKODNJH_01767 0.0 yjjP S Threonine/Serine exporter, ThrE
NIKODNJH_01768 6.1e-299 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NIKODNJH_01769 2.2e-204 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
NIKODNJH_01770 4.9e-42 S Protein of unknown function (DUF3073)
NIKODNJH_01771 6.3e-63 I Sterol carrier protein
NIKODNJH_01772 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
NIKODNJH_01773 1.5e-35
NIKODNJH_01774 1.4e-144 gluP 3.4.21.105 S Rhomboid family
NIKODNJH_01775 1.1e-240 L ribosomal rna small subunit methyltransferase
NIKODNJH_01776 1.8e-57 crgA D Involved in cell division
NIKODNJH_01777 6.8e-142 S Bacterial protein of unknown function (DUF881)
NIKODNJH_01778 6.7e-209 srtA 3.4.22.70 M Sortase family
NIKODNJH_01779 1.7e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
NIKODNJH_01780 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
NIKODNJH_01781 7.6e-177 T Protein tyrosine kinase
NIKODNJH_01782 8e-266 pbpA M penicillin-binding protein
NIKODNJH_01783 2.2e-274 rodA D Belongs to the SEDS family
NIKODNJH_01784 1.5e-241 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
NIKODNJH_01785 9.6e-73 fhaB T Inner membrane component of T3SS, cytoplasmic domain
NIKODNJH_01786 1.2e-131 fhaA T Protein of unknown function (DUF2662)
NIKODNJH_01787 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
NIKODNJH_01788 6.6e-224 2.7.13.3 T Histidine kinase
NIKODNJH_01789 3.2e-113 K helix_turn_helix, Lux Regulon
NIKODNJH_01790 6.6e-193 pldB 3.1.1.5 I Serine aminopeptidase, S33
NIKODNJH_01791 8.8e-160 yicL EG EamA-like transporter family
NIKODNJH_01792 4.1e-86 XK27_10430 S NAD(P)H-binding
NIKODNJH_01793 7.8e-44 ydeP K HxlR-like helix-turn-helix
NIKODNJH_01797 2.4e-22 2.7.13.3 T Histidine kinase
NIKODNJH_01798 1.2e-36 K helix_turn_helix, Lux Regulon
NIKODNJH_01799 9.4e-269 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NIKODNJH_01800 8.5e-287 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
NIKODNJH_01801 0.0 cadA P E1-E2 ATPase
NIKODNJH_01802 2.3e-187 ansA 3.5.1.1 EJ Asparaginase
NIKODNJH_01803 3.1e-270 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
NIKODNJH_01804 1.7e-183 htpX O Belongs to the peptidase M48B family
NIKODNJH_01806 3.2e-65 K Helix-turn-helix XRE-family like proteins
NIKODNJH_01807 1.3e-169 yddG EG EamA-like transporter family
NIKODNJH_01808 0.0 pip S YhgE Pip domain protein
NIKODNJH_01809 0.0 pip S YhgE Pip domain protein
NIKODNJH_01810 3.2e-217 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
NIKODNJH_01811 3.5e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NIKODNJH_01812 9.8e-155 clcA P Voltage gated chloride channel
NIKODNJH_01813 1e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
NIKODNJH_01814 1.2e-61 S Protein of unknown function (DUF4235)
NIKODNJH_01815 2.4e-135 G Phosphoglycerate mutase family
NIKODNJH_01816 1.5e-258 amyE G Bacterial extracellular solute-binding protein
NIKODNJH_01817 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
NIKODNJH_01818 7.7e-263 amyE G Bacterial extracellular solute-binding protein
NIKODNJH_01819 2e-186 K Periplasmic binding protein-like domain
NIKODNJH_01820 1.7e-182 K Psort location Cytoplasmic, score
NIKODNJH_01821 3.7e-154 msmF G Binding-protein-dependent transport system inner membrane component
NIKODNJH_01822 4e-153 rafG G ABC transporter permease
NIKODNJH_01823 6.2e-106 S Protein of unknown function, DUF624
NIKODNJH_01824 8.2e-108 pepE 3.4.13.21 E Peptidase family S51
NIKODNJH_01825 2.9e-13 S Transposon-encoded protein TnpV
NIKODNJH_01826 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
NIKODNJH_01827 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
NIKODNJH_01828 5.6e-236 malE G Bacterial extracellular solute-binding protein
NIKODNJH_01829 3.2e-248 malF G Binding-protein-dependent transport system inner membrane component
NIKODNJH_01830 2.7e-163 malG G Binding-protein-dependent transport system inner membrane component
NIKODNJH_01831 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
NIKODNJH_01832 5.4e-144 S HAD-hyrolase-like
NIKODNJH_01833 3.9e-142 traX S TraX protein
NIKODNJH_01834 3.2e-192 K Psort location Cytoplasmic, score
NIKODNJH_01835 1e-19 srtC 3.4.22.70 M Sortase family
NIKODNJH_01836 7.7e-61 srtC 3.4.22.70 M Sortase family
NIKODNJH_01837 1.9e-119 S membrane transporter protein
NIKODNJH_01838 1.5e-113 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
NIKODNJH_01839 1.3e-145 S Mitochondrial biogenesis AIM24
NIKODNJH_01840 0.0 dnaK O Heat shock 70 kDa protein
NIKODNJH_01841 2.8e-48 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NIKODNJH_01842 3.9e-158 dnaJ1 O DnaJ molecular chaperone homology domain
NIKODNJH_01843 3.2e-113 hspR K transcriptional regulator, MerR family
NIKODNJH_01844 8.6e-47
NIKODNJH_01845 4.3e-129 S HAD hydrolase, family IA, variant 3
NIKODNJH_01847 5.8e-126 dedA S SNARE associated Golgi protein
NIKODNJH_01848 1.6e-17 3.2.1.78 GH26 G Glycosyl hydrolase family 26
NIKODNJH_01849 1.2e-189 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NIKODNJH_01850 6.6e-107
NIKODNJH_01851 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NIKODNJH_01852 0.0 cbgA_1 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
NIKODNJH_01854 4.1e-135 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
NIKODNJH_01855 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NIKODNJH_01856 1.1e-262 lacS G Psort location CytoplasmicMembrane, score 10.00
NIKODNJH_01857 3.1e-209 GK ROK family
NIKODNJH_01858 4.2e-242 G Bacterial extracellular solute-binding protein
NIKODNJH_01859 7.5e-147 G Binding-protein-dependent transport system inner membrane component
NIKODNJH_01860 4.4e-164 G ABC transporter permease
NIKODNJH_01861 1.9e-172 2.7.1.2 GK ROK family
NIKODNJH_01862 0.0 G Glycosyl hydrolase family 20, domain 2
NIKODNJH_01863 2.9e-148 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NIKODNJH_01864 4.2e-237 nagA 3.5.1.25 G Amidohydrolase family
NIKODNJH_01865 2.3e-187 lacR K Transcriptional regulator, LacI family
NIKODNJH_01866 0.0 T Diguanylate cyclase, GGDEF domain
NIKODNJH_01867 5.5e-250 3.2.1.14 GH18 S Carbohydrate binding domain
NIKODNJH_01868 0.0 M probably involved in cell wall
NIKODNJH_01869 8e-229 M Protein of unknown function (DUF2961)
NIKODNJH_01870 2.5e-155 I alpha/beta hydrolase fold
NIKODNJH_01871 5e-27 S Psort location Cytoplasmic, score 8.87
NIKODNJH_01872 1.4e-214 lipA I Hydrolase, alpha beta domain protein
NIKODNJH_01873 0.0 mdlA2 V ABC transporter
NIKODNJH_01874 0.0 yknV V ABC transporter
NIKODNJH_01875 8e-126
NIKODNJH_01876 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
NIKODNJH_01877 1.4e-223 K helix_turn _helix lactose operon repressor
NIKODNJH_01878 2.3e-233 G Alpha galactosidase A
NIKODNJH_01879 0.0 G Alpha-L-arabinofuranosidase C-terminus
NIKODNJH_01880 7.7e-185 tatD L TatD related DNase
NIKODNJH_01881 0.0 kup P Transport of potassium into the cell
NIKODNJH_01882 1e-167 S Glutamine amidotransferase domain
NIKODNJH_01883 5.1e-150 T HD domain
NIKODNJH_01884 2.9e-157 V ABC transporter
NIKODNJH_01885 5.2e-240 V ABC transporter permease
NIKODNJH_01886 0.0 S Psort location CytoplasmicMembrane, score 9.99
NIKODNJH_01887 7.4e-30 3.1.21.4 L Restriction endonuclease XhoI
NIKODNJH_01890 1.5e-24 S Domain of unknown function (DUF3846)
NIKODNJH_01892 3.8e-32 K Helix-turn-helix domain
NIKODNJH_01893 8.3e-47 VY92_07350 S Phage derived protein Gp49-like (DUF891)
NIKODNJH_01894 6.8e-24
NIKODNJH_01899 2.5e-95 S Protein of unknown function (DUF2786)
NIKODNJH_01900 1.6e-98 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
NIKODNJH_01902 1.8e-52 L single-stranded DNA binding
NIKODNJH_01903 2.1e-38 S Fic/DOC family
NIKODNJH_01904 1.3e-96
NIKODNJH_01906 0.0 traA 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
NIKODNJH_01907 2.3e-32
NIKODNJH_01908 1e-30 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
NIKODNJH_01909 9.2e-37 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
NIKODNJH_01910 2.5e-76 XK27_08505 D nucleotidyltransferase activity
NIKODNJH_01911 7.7e-196 topB 5.99.1.2 L DNA topoisomerase
NIKODNJH_01913 1.6e-20
NIKODNJH_01916 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NIKODNJH_01918 8.9e-76
NIKODNJH_01919 3e-83 pin L Resolvase, N terminal domain
NIKODNJH_01920 2.9e-262 V N-6 DNA Methylase
NIKODNJH_01921 4e-70 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
NIKODNJH_01927 1.4e-286 U TraM recognition site of TraD and TraG
NIKODNJH_01928 4e-256 U Type IV secretory pathway, VirB4
NIKODNJH_01931 4.2e-38 D nuclear chromosome segregation
NIKODNJH_01932 3.1e-72 M Sortase family
NIKODNJH_01933 2.3e-101 S Listeria-Bacteroides repeat domain (List_Bact_rpt)
NIKODNJH_01934 2.6e-92 M domain protein
NIKODNJH_01935 0.0 XK27_00515 D Cell surface antigen C-terminus
NIKODNJH_01936 1.2e-65
NIKODNJH_01938 2.4e-75 S Pfam:CtkA_N
NIKODNJH_01941 6.1e-104
NIKODNJH_01942 8.9e-26
NIKODNJH_01946 3.2e-206
NIKODNJH_01947 7.6e-105
NIKODNJH_01950 6.6e-159 mltE2 M Bacteriophage peptidoglycan hydrolase

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)