ORF_ID e_value Gene_name EC_number CAZy COGs Description
PHFJOIIO_00001 7e-189 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PHFJOIIO_00002 9.8e-155 sapF E ATPases associated with a variety of cellular activities
PHFJOIIO_00003 4e-142 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
PHFJOIIO_00004 4.9e-163 EP Binding-protein-dependent transport system inner membrane component
PHFJOIIO_00005 1.4e-170 P Binding-protein-dependent transport system inner membrane component
PHFJOIIO_00006 1.8e-309 E ABC transporter, substrate-binding protein, family 5
PHFJOIIO_00007 3.6e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PHFJOIIO_00008 4.8e-276 G Bacterial extracellular solute-binding protein
PHFJOIIO_00009 3.8e-66 G carbohydrate transport
PHFJOIIO_00010 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PHFJOIIO_00011 5.5e-124 G ABC transporter permease
PHFJOIIO_00012 2.9e-190 K Periplasmic binding protein domain
PHFJOIIO_00013 7.7e-21 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PHFJOIIO_00014 0.0 3.2.1.51 GH29 G Alpha-L-fucosidase
PHFJOIIO_00016 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PHFJOIIO_00017 5e-55 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PHFJOIIO_00018 3e-273 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
PHFJOIIO_00019 1.9e-124 XK27_08050 O prohibitin homologues
PHFJOIIO_00020 9.9e-244 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
PHFJOIIO_00021 1.2e-233 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PHFJOIIO_00022 4.7e-260 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
PHFJOIIO_00023 1.8e-226 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PHFJOIIO_00024 0.0 macB_2 V ATPases associated with a variety of cellular activities
PHFJOIIO_00025 0.0 ctpE P E1-E2 ATPase
PHFJOIIO_00026 2.4e-53 racA K MerR, DNA binding
PHFJOIIO_00027 5.4e-197 yghZ C Aldo/keto reductase family
PHFJOIIO_00028 8.2e-99 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
PHFJOIIO_00029 2.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
PHFJOIIO_00030 1.1e-149 map 3.4.11.18 E Methionine aminopeptidase
PHFJOIIO_00031 3.9e-122 S Short repeat of unknown function (DUF308)
PHFJOIIO_00032 0.0 pepO 3.4.24.71 O Peptidase family M13
PHFJOIIO_00033 1.6e-120 L Single-strand binding protein family
PHFJOIIO_00034 5.1e-114
PHFJOIIO_00035 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PHFJOIIO_00038 6.7e-270 recD2 3.6.4.12 L PIF1-like helicase
PHFJOIIO_00039 1.5e-160 supH S Sucrose-6F-phosphate phosphohydrolase
PHFJOIIO_00040 2.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PHFJOIIO_00041 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PHFJOIIO_00042 3.5e-288 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PHFJOIIO_00043 1e-191 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
PHFJOIIO_00044 5.2e-116 ywlC 2.7.7.87 J Belongs to the SUA5 family
PHFJOIIO_00045 9.2e-55 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
PHFJOIIO_00046 7.2e-186 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PHFJOIIO_00047 3.2e-187 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PHFJOIIO_00048 3.9e-36 rpmE J Binds the 23S rRNA
PHFJOIIO_00050 8.4e-193 K helix_turn_helix, arabinose operon control protein
PHFJOIIO_00051 9.4e-161 glcU G Sugar transport protein
PHFJOIIO_00052 5.7e-178 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, C-terminal alpha/beta domain
PHFJOIIO_00053 3.5e-257 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
PHFJOIIO_00054 2e-53
PHFJOIIO_00055 1.4e-09 L Helix-turn-helix domain
PHFJOIIO_00056 3.1e-169 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PHFJOIIO_00057 6.7e-140 3.5.2.6 V Beta-lactamase enzyme family
PHFJOIIO_00058 8.2e-306 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
PHFJOIIO_00059 1.8e-162 EG EamA-like transporter family
PHFJOIIO_00061 2e-125 V FtsX-like permease family
PHFJOIIO_00062 4.5e-147 S Sulfite exporter TauE/SafE
PHFJOIIO_00064 8.4e-215 MA20_36090 S Psort location Cytoplasmic, score 8.87
PHFJOIIO_00065 3.4e-252 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
PHFJOIIO_00066 2.3e-34 1.1.1.122, 1.1.1.65 C Aldo/keto reductase family
PHFJOIIO_00067 1.2e-72 EGP Major facilitator superfamily
PHFJOIIO_00068 3.7e-179 glkA 2.7.1.2 G ROK family
PHFJOIIO_00069 3.6e-296 S ATPases associated with a variety of cellular activities
PHFJOIIO_00070 2.1e-47 EGP Major facilitator Superfamily
PHFJOIIO_00071 4.6e-157 I alpha/beta hydrolase fold
PHFJOIIO_00072 6.5e-116 S Pyridoxamine 5'-phosphate oxidase
PHFJOIIO_00074 1.3e-55 S DUF218 domain
PHFJOIIO_00075 6.3e-17 S Protein of unknown function (DUF979)
PHFJOIIO_00076 1.7e-114 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PHFJOIIO_00078 5.7e-126
PHFJOIIO_00079 4.2e-57 M domain, Protein
PHFJOIIO_00080 3.3e-09 M domain, Protein
PHFJOIIO_00081 5.3e-306 yjjK S ATP-binding cassette protein, ChvD family
PHFJOIIO_00082 0.0 3.2.1.52, 3.2.1.83 GH16,GH20 G hydrolase family 20, catalytic
PHFJOIIO_00083 3.9e-170 tesB I Thioesterase-like superfamily
PHFJOIIO_00084 4.8e-75 S Protein of unknown function (DUF3180)
PHFJOIIO_00085 7.4e-291 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PHFJOIIO_00086 1.2e-160 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PHFJOIIO_00087 4.5e-100 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
PHFJOIIO_00088 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PHFJOIIO_00089 9.4e-98 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PHFJOIIO_00090 2.3e-212 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PHFJOIIO_00091 5.3e-262 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
PHFJOIIO_00092 2.3e-309
PHFJOIIO_00093 1.7e-168 natA V ATPases associated with a variety of cellular activities
PHFJOIIO_00094 1.3e-232 epsG M Glycosyl transferase family 21
PHFJOIIO_00095 4.3e-273 S AI-2E family transporter
PHFJOIIO_00096 4.3e-177 3.4.14.13 M Glycosyltransferase like family 2
PHFJOIIO_00097 8.1e-205 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
PHFJOIIO_00098 4.6e-33 S membrane transporter protein
PHFJOIIO_00101 3.7e-67 S Domain of unknown function (DUF4190)
PHFJOIIO_00102 6.9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PHFJOIIO_00103 4.8e-176 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PHFJOIIO_00105 4.1e-23 S Helix-turn-helix domain
PHFJOIIO_00106 4.9e-19 S Transcription factor WhiB
PHFJOIIO_00107 1.7e-268 lacS G Psort location CytoplasmicMembrane, score 10.00
PHFJOIIO_00108 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PHFJOIIO_00109 1.2e-25 nagA 3.5.1.25 G Amidohydrolase family
PHFJOIIO_00110 4.1e-181 lacR K Transcriptional regulator, LacI family
PHFJOIIO_00111 4e-229 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PHFJOIIO_00112 3.9e-119 K Transcriptional regulatory protein, C terminal
PHFJOIIO_00113 4.8e-101
PHFJOIIO_00114 1.8e-95 V N-Acetylmuramoyl-L-alanine amidase
PHFJOIIO_00115 1.6e-143 L IstB-like ATP binding protein
PHFJOIIO_00116 5.8e-296 L PFAM Integrase catalytic
PHFJOIIO_00117 3.2e-59 V N-Acetylmuramoyl-L-alanine amidase
PHFJOIIO_00118 3e-48 ytrE V ABC transporter
PHFJOIIO_00119 7.3e-43 ytrE V ABC transporter
PHFJOIIO_00120 1.5e-171
PHFJOIIO_00122 4.7e-220 vex3 V ABC transporter permease
PHFJOIIO_00123 7.5e-209 vex1 V Efflux ABC transporter, permease protein
PHFJOIIO_00124 1.3e-111 vex2 V ABC transporter, ATP-binding protein
PHFJOIIO_00125 2.2e-45 azlD E Branched-chain amino acid transport protein (AzlD)
PHFJOIIO_00126 2.2e-196 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
PHFJOIIO_00127 1.8e-95 ptpA 3.1.3.48 T low molecular weight
PHFJOIIO_00128 7.8e-128 folA 1.5.1.3 H dihydrofolate reductase
PHFJOIIO_00129 1.9e-174 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PHFJOIIO_00130 3.8e-72 attW O OsmC-like protein
PHFJOIIO_00131 1.6e-191 T Universal stress protein family
PHFJOIIO_00132 1.7e-105 M NlpC/P60 family
PHFJOIIO_00133 2.3e-179 usp 3.5.1.28 CBM50 S CHAP domain
PHFJOIIO_00134 8.5e-215 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PHFJOIIO_00135 0.0 tetP J Elongation factor G, domain IV
PHFJOIIO_00136 4.5e-39
PHFJOIIO_00137 4.3e-215 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PHFJOIIO_00138 1.7e-117 phoU P Plays a role in the regulation of phosphate uptake
PHFJOIIO_00139 7.6e-09 EGP Major facilitator Superfamily
PHFJOIIO_00140 4.9e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PHFJOIIO_00141 9.5e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PHFJOIIO_00142 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PHFJOIIO_00144 2.8e-216 araJ EGP Major facilitator Superfamily
PHFJOIIO_00145 0.0 S Domain of unknown function (DUF4037)
PHFJOIIO_00146 1.6e-111 S Protein of unknown function (DUF4125)
PHFJOIIO_00147 2.1e-129
PHFJOIIO_00148 3.3e-295 pspC KT PspC domain
PHFJOIIO_00149 5.4e-270 tcsS3 KT PspC domain
PHFJOIIO_00150 9.2e-126 degU K helix_turn_helix, Lux Regulon
PHFJOIIO_00151 5.3e-278 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PHFJOIIO_00152 1.7e-142 pgl 3.1.1.31 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PHFJOIIO_00153 1.2e-185 opcA G Glucose-6-phosphate dehydrogenase subunit
PHFJOIIO_00154 0.0 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PHFJOIIO_00155 2.6e-94
PHFJOIIO_00157 0.0 nagLU 3.1.4.53, 3.2.1.21, 3.2.1.50 GH3 G Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
PHFJOIIO_00159 5.6e-229 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PHFJOIIO_00160 0.0 nucH 3.1.3.5 F 5'-nucleotidase, C-terminal domain
PHFJOIIO_00161 6.7e-212 I Diacylglycerol kinase catalytic domain
PHFJOIIO_00162 1.3e-151 arbG K CAT RNA binding domain
PHFJOIIO_00163 0.0 crr G pts system, glucose-specific IIABC component
PHFJOIIO_00165 4.4e-42 M Spy0128-like isopeptide containing domain
PHFJOIIO_00166 2.7e-43 M Spy0128-like isopeptide containing domain
PHFJOIIO_00167 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PHFJOIIO_00168 4.4e-261 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PHFJOIIO_00169 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
PHFJOIIO_00170 1.4e-203 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHFJOIIO_00171 5.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PHFJOIIO_00173 2.3e-105
PHFJOIIO_00174 1e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PHFJOIIO_00175 8.5e-232 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
PHFJOIIO_00176 2.9e-235 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PHFJOIIO_00177 4.7e-84 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PHFJOIIO_00178 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PHFJOIIO_00179 6.1e-188 nusA K Participates in both transcription termination and antitermination
PHFJOIIO_00180 1.6e-161
PHFJOIIO_00181 2.8e-27 L Transposase and inactivated derivatives
PHFJOIIO_00182 8.3e-26
PHFJOIIO_00184 5e-153 E Transglutaminase/protease-like homologues
PHFJOIIO_00185 0.0 gcs2 S A circularly permuted ATPgrasp
PHFJOIIO_00186 6.4e-173 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PHFJOIIO_00187 0.0 3.2.1.52 GH20 G hydrolase family 20, catalytic
PHFJOIIO_00188 2.8e-64 rplQ J Ribosomal protein L17
PHFJOIIO_00189 8.9e-184 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHFJOIIO_00190 1.1e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PHFJOIIO_00191 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PHFJOIIO_00192 6.5e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PHFJOIIO_00193 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PHFJOIIO_00194 3.8e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PHFJOIIO_00195 4.7e-249 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PHFJOIIO_00196 6.1e-63 rplO J binds to the 23S rRNA
PHFJOIIO_00197 1e-24 rpmD J Ribosomal protein L30p/L7e
PHFJOIIO_00198 1.5e-100 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PHFJOIIO_00199 1.1e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PHFJOIIO_00200 2.1e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PHFJOIIO_00201 4.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PHFJOIIO_00202 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PHFJOIIO_00203 2.2e-102 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PHFJOIIO_00204 3.5e-52 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PHFJOIIO_00205 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PHFJOIIO_00206 3.5e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PHFJOIIO_00207 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
PHFJOIIO_00208 5.8e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PHFJOIIO_00209 7.5e-96 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PHFJOIIO_00210 4.3e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PHFJOIIO_00211 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PHFJOIIO_00212 4.2e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PHFJOIIO_00213 2.6e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PHFJOIIO_00214 3.9e-119 rplD J Forms part of the polypeptide exit tunnel
PHFJOIIO_00215 4.2e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PHFJOIIO_00216 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
PHFJOIIO_00218 2.2e-28 ywiC S YwiC-like protein
PHFJOIIO_00219 3.3e-166 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
PHFJOIIO_00220 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PHFJOIIO_00221 1.4e-231 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PHFJOIIO_00222 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PHFJOIIO_00223 8.8e-68 rpsI J Belongs to the universal ribosomal protein uS9 family
PHFJOIIO_00224 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PHFJOIIO_00225 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PHFJOIIO_00226 3e-120
PHFJOIIO_00227 6.2e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
PHFJOIIO_00228 1.1e-256 M Bacterial capsule synthesis protein PGA_cap
PHFJOIIO_00230 2.3e-240 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PHFJOIIO_00231 1.9e-225 dapC E Aminotransferase class I and II
PHFJOIIO_00232 9e-61 fdxA C 4Fe-4S binding domain
PHFJOIIO_00233 6.9e-215 murB 1.3.1.98 M Cell wall formation
PHFJOIIO_00234 1.9e-25 rpmG J Ribosomal protein L33
PHFJOIIO_00238 2.7e-51 moxR S ATPase family associated with various cellular activities (AAA)
PHFJOIIO_00239 2.1e-132 bla1 3.5.2.6 V Beta-lactamase enzyme family
PHFJOIIO_00240 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PHFJOIIO_00241 6.3e-148
PHFJOIIO_00242 2.3e-149 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
PHFJOIIO_00243 2e-120 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
PHFJOIIO_00244 3.2e-38 fmdB S Putative regulatory protein
PHFJOIIO_00245 8.5e-91 flgA NO SAF
PHFJOIIO_00246 9.6e-42
PHFJOIIO_00247 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
PHFJOIIO_00248 3.6e-238 T Forkhead associated domain
PHFJOIIO_00250 1.3e-37 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PHFJOIIO_00251 2.1e-88 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PHFJOIIO_00252 9.1e-184 xynB2 1.1.1.169 E lipolytic protein G-D-S-L family
PHFJOIIO_00253 0.0 guxA1 3.2.1.18, 3.2.1.91 GH33,GH6 G BNR repeat-like domain
PHFJOIIO_00254 8.8e-222 pbuO S Permease family
PHFJOIIO_00255 1.4e-12 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PHFJOIIO_00256 3e-170 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PHFJOIIO_00257 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PHFJOIIO_00258 6.2e-180 pstA P Phosphate transport system permease
PHFJOIIO_00259 3.8e-171 pstC P probably responsible for the translocation of the substrate across the membrane
PHFJOIIO_00260 3e-172 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
PHFJOIIO_00261 1.3e-128 KT Transcriptional regulatory protein, C terminal
PHFJOIIO_00262 8.5e-246 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PHFJOIIO_00263 4.3e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PHFJOIIO_00264 1.1e-239 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PHFJOIIO_00265 9.7e-109 K helix_turn_helix, Arsenical Resistance Operon Repressor
PHFJOIIO_00266 1.1e-243 EGP Major facilitator Superfamily
PHFJOIIO_00267 1.5e-219 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PHFJOIIO_00268 1.4e-168 L Excalibur calcium-binding domain
PHFJOIIO_00269 1.2e-268 pepC 3.4.22.40 E Peptidase C1-like family
PHFJOIIO_00270 3.1e-52 D nuclear chromosome segregation
PHFJOIIO_00271 1.2e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PHFJOIIO_00272 6.5e-145 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PHFJOIIO_00273 1.8e-187 yfiH Q Multi-copper polyphenol oxidoreductase laccase
PHFJOIIO_00274 0.0 yegQ O Peptidase family U32 C-terminal domain
PHFJOIIO_00275 3.2e-95 L Transposase and inactivated derivatives IS30 family
PHFJOIIO_00276 3.9e-167 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
PHFJOIIO_00277 2.2e-41 nrdH O Glutaredoxin
PHFJOIIO_00278 9.5e-98 nrdI F Probably involved in ribonucleotide reductase function
PHFJOIIO_00279 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHFJOIIO_00281 5.3e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PHFJOIIO_00282 1.5e-72 megL 2.5.1.48, 4.4.1.1, 4.4.1.11, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PHFJOIIO_00283 0.0 S Predicted membrane protein (DUF2207)
PHFJOIIO_00284 1.5e-87 lemA S LemA family
PHFJOIIO_00285 1.8e-114 xylR K purine nucleotide biosynthetic process
PHFJOIIO_00286 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PHFJOIIO_00287 3e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PHFJOIIO_00288 4.9e-117
PHFJOIIO_00289 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
PHFJOIIO_00291 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
PHFJOIIO_00292 5.9e-100 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PHFJOIIO_00293 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
PHFJOIIO_00294 7.2e-308 pccB I Carboxyl transferase domain
PHFJOIIO_00295 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PHFJOIIO_00296 2.1e-92 bioY S BioY family
PHFJOIIO_00297 9.9e-152 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
PHFJOIIO_00298 0.0
PHFJOIIO_00299 1.3e-145 QT PucR C-terminal helix-turn-helix domain
PHFJOIIO_00300 2.3e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PHFJOIIO_00301 8.7e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PHFJOIIO_00302 1.5e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PHFJOIIO_00303 2.7e-166 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PHFJOIIO_00304 0.0 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PHFJOIIO_00305 5.3e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHFJOIIO_00306 4.6e-62 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PHFJOIIO_00307 1.2e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PHFJOIIO_00308 3e-145 atpB C it plays a direct role in the translocation of protons across the membrane
PHFJOIIO_00309 4.1e-208 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PHFJOIIO_00315 4.7e-44
PHFJOIIO_00316 8.2e-17 S Helix-turn-helix domain
PHFJOIIO_00317 4e-98 L HNH endonuclease
PHFJOIIO_00318 1.3e-38
PHFJOIIO_00319 3.2e-235 S Terminase
PHFJOIIO_00320 1.8e-161 S Phage portal protein
PHFJOIIO_00321 3e-210 S Caudovirus prohead serine protease
PHFJOIIO_00322 1.5e-42
PHFJOIIO_00323 6.9e-33
PHFJOIIO_00324 9.7e-60
PHFJOIIO_00325 5.4e-54
PHFJOIIO_00326 3.8e-36
PHFJOIIO_00327 8e-154 NT phage tail tape measure protein
PHFJOIIO_00328 2.4e-108
PHFJOIIO_00329 5.9e-14
PHFJOIIO_00330 3.3e-32 S Bacteriophage holin family
PHFJOIIO_00331 1e-82 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
PHFJOIIO_00332 2.6e-88 L Phage integrase family
PHFJOIIO_00334 4.6e-35
PHFJOIIO_00335 0.0 K RNA polymerase II activating transcription factor binding
PHFJOIIO_00336 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PHFJOIIO_00337 5.2e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PHFJOIIO_00339 1.3e-102 mntP P Probably functions as a manganese efflux pump
PHFJOIIO_00340 1.4e-125
PHFJOIIO_00341 2e-135 KT Transcriptional regulatory protein, C terminal
PHFJOIIO_00342 1.9e-126 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PHFJOIIO_00343 7.4e-294 E Bacterial extracellular solute-binding proteins, family 5 Middle
PHFJOIIO_00344 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PHFJOIIO_00345 0.0 S domain protein
PHFJOIIO_00346 4.7e-73 tyrA 5.4.99.5 E Chorismate mutase type II
PHFJOIIO_00347 1.5e-89 lrp_3 K helix_turn_helix ASNC type
PHFJOIIO_00348 4e-234 E Aminotransferase class I and II
PHFJOIIO_00349 2.9e-311 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PHFJOIIO_00350 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
PHFJOIIO_00351 3.3e-52 S Protein of unknown function (DUF2469)
PHFJOIIO_00352 1.7e-198 2.3.1.57 J Acetyltransferase (GNAT) domain
PHFJOIIO_00353 1.9e-286 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHFJOIIO_00354 1.1e-289 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PHFJOIIO_00355 6.2e-48 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PHFJOIIO_00356 1.3e-58 V ABC transporter
PHFJOIIO_00357 1.3e-58 V ABC transporter
PHFJOIIO_00358 2.2e-154 spoU 2.1.1.185 J RNA methyltransferase TrmH family
PHFJOIIO_00359 2.7e-129 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PHFJOIIO_00360 1.3e-214 rmuC S RmuC family
PHFJOIIO_00361 9.6e-43 csoR S Metal-sensitive transcriptional repressor
PHFJOIIO_00362 0.0 pacS 3.6.3.54 P E1-E2 ATPase
PHFJOIIO_00363 0.0 ubiB S ABC1 family
PHFJOIIO_00364 2.8e-16 S granule-associated protein
PHFJOIIO_00365 4.8e-142 cobQ S CobB/CobQ-like glutamine amidotransferase domain
PHFJOIIO_00366 5e-282 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
PHFJOIIO_00367 7.5e-258 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PHFJOIIO_00368 9.1e-251 dinF V MatE
PHFJOIIO_00369 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
PHFJOIIO_00370 1e-54 glnB K Nitrogen regulatory protein P-II
PHFJOIIO_00371 1.5e-220 amt U Ammonium Transporter Family
PHFJOIIO_00372 5.3e-194 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PHFJOIIO_00374 1.2e-116 icaR K Bacterial regulatory proteins, tetR family
PHFJOIIO_00375 2.1e-196 XK27_01805 M Glycosyltransferase like family 2
PHFJOIIO_00376 0.0 S Glycosyl hydrolases related to GH101 family, GH129
PHFJOIIO_00377 1.3e-303 pepD E Peptidase family C69
PHFJOIIO_00379 9.8e-88 XK26_04485 P Cobalt transport protein
PHFJOIIO_00380 2.2e-81
PHFJOIIO_00381 0.0 V ABC transporter transmembrane region
PHFJOIIO_00382 1.8e-301 V ABC transporter, ATP-binding protein
PHFJOIIO_00383 2.7e-82 K Winged helix DNA-binding domain
PHFJOIIO_00384 2.2e-09
PHFJOIIO_00385 1e-118 L Integrase core domain
PHFJOIIO_00386 2e-40 L Psort location Cytoplasmic, score 8.87
PHFJOIIO_00387 2.1e-88 E IrrE N-terminal-like domain
PHFJOIIO_00389 9.9e-160 S Sucrose-6F-phosphate phosphohydrolase
PHFJOIIO_00390 4e-237 S Putative ABC-transporter type IV
PHFJOIIO_00391 2e-80
PHFJOIIO_00392 6.2e-35 Q phosphatase activity
PHFJOIIO_00393 1.2e-293 bglA 3.2.1.86 GT1 G Glycosyl hydrolase family 1
PHFJOIIO_00394 7.5e-39 celC 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PHFJOIIO_00395 1.2e-48 celA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PHFJOIIO_00396 3.2e-147 gmuC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHFJOIIO_00397 5.7e-83 gmuC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PHFJOIIO_00398 4.6e-67 S haloacid dehalogenase-like hydrolase
PHFJOIIO_00399 3.6e-131 yydK K UTRA
PHFJOIIO_00400 1.3e-70 S FMN_bind
PHFJOIIO_00401 5.7e-149 macB V ABC transporter, ATP-binding protein
PHFJOIIO_00402 4.1e-202 Z012_06715 V FtsX-like permease family
PHFJOIIO_00403 9.7e-223 macB_2 V ABC transporter permease
PHFJOIIO_00404 9.2e-234 S Predicted membrane protein (DUF2318)
PHFJOIIO_00405 1.8e-106 tpd P Fe2+ transport protein
PHFJOIIO_00406 4.6e-308 efeU_1 P Iron permease FTR1 family
PHFJOIIO_00407 5.9e-22 G MFS/sugar transport protein
PHFJOIIO_00408 1.7e-198 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PHFJOIIO_00409 1.8e-115 S Fic/DOC family
PHFJOIIO_00410 1.1e-290 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PHFJOIIO_00411 5e-38 ptsH G PTS HPr component phosphorylation site
PHFJOIIO_00412 4.9e-199 K helix_turn _helix lactose operon repressor
PHFJOIIO_00413 1.7e-210 holB 2.7.7.7 L DNA polymerase III
PHFJOIIO_00414 2.1e-118 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PHFJOIIO_00415 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PHFJOIIO_00416 8.8e-188 3.6.1.27 I PAP2 superfamily
PHFJOIIO_00417 0.0 vpr M PA domain
PHFJOIIO_00418 2.7e-123 yplQ S Haemolysin-III related
PHFJOIIO_00419 9.3e-233 glf 5.4.99.9 M UDP-galactopyranose mutase
PHFJOIIO_00420 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PHFJOIIO_00421 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PHFJOIIO_00422 1e-278 S Calcineurin-like phosphoesterase
PHFJOIIO_00423 6.7e-15 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
PHFJOIIO_00424 1.5e-280 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
PHFJOIIO_00425 1.7e-116
PHFJOIIO_00426 1.7e-212 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PHFJOIIO_00428 1.8e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
PHFJOIIO_00429 5.3e-136 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PHFJOIIO_00430 1.9e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PHFJOIIO_00431 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
PHFJOIIO_00432 9.2e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
PHFJOIIO_00433 2.6e-56 S TIGRFAM helicase secretion neighborhood TadE-like protein
PHFJOIIO_00434 1.9e-41 S Protein of unknown function (DUF4244)
PHFJOIIO_00435 3.2e-15 gspF NU Type II secretion system (T2SS), protein F
PHFJOIIO_00436 1.4e-14 gspF NU Type II secretion system (T2SS), protein F
PHFJOIIO_00437 5.9e-118 U Type ii secretion system
PHFJOIIO_00438 1.3e-190 cpaF U Type II IV secretion system protein
PHFJOIIO_00439 2.6e-152 cpaE D bacterial-type flagellum organization
PHFJOIIO_00441 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PHFJOIIO_00442 1.4e-200 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
PHFJOIIO_00443 1.3e-91
PHFJOIIO_00444 5.1e-24 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PHFJOIIO_00445 2.6e-208 S Glycosyltransferase, group 2 family protein
PHFJOIIO_00446 2e-186
PHFJOIIO_00447 6e-47
PHFJOIIO_00448 6.5e-17
PHFJOIIO_00449 8.7e-27 thiS 2.8.1.10 H ThiS family
PHFJOIIO_00450 1.9e-164 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PHFJOIIO_00451 0.0 S Psort location Cytoplasmic, score 8.87
PHFJOIIO_00452 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
PHFJOIIO_00453 1.1e-246 V ABC transporter permease
PHFJOIIO_00454 2.1e-180 V ABC transporter
PHFJOIIO_00455 5.4e-138 T HD domain
PHFJOIIO_00456 3e-164 S Glutamine amidotransferase domain
PHFJOIIO_00458 0.0 kup P Transport of potassium into the cell
PHFJOIIO_00459 8.5e-184 tatD L TatD related DNase
PHFJOIIO_00460 2.5e-16 G MFS/sugar transport protein
PHFJOIIO_00461 1.5e-201 xylR 5.3.1.12 G MFS/sugar transport protein
PHFJOIIO_00462 7e-31 xylR 5.3.1.12 G MFS/sugar transport protein
PHFJOIIO_00463 1.7e-07 G Bacterial extracellular solute-binding protein
PHFJOIIO_00464 3.4e-83 K Transcriptional regulator
PHFJOIIO_00465 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PHFJOIIO_00466 3.6e-130
PHFJOIIO_00467 8.6e-59
PHFJOIIO_00468 1.1e-168 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PHFJOIIO_00469 1.3e-125 dedA S SNARE associated Golgi protein
PHFJOIIO_00471 3.5e-134 S HAD hydrolase, family IA, variant 3
PHFJOIIO_00472 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR Asp-box repeat
PHFJOIIO_00473 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR repeat-like domain
PHFJOIIO_00474 5.2e-87 hspR K transcriptional regulator, MerR family
PHFJOIIO_00475 2.1e-172 dnaJ1 O DnaJ molecular chaperone homology domain
PHFJOIIO_00476 2.8e-59 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PHFJOIIO_00477 0.0 dnaK O Heat shock 70 kDa protein
PHFJOIIO_00478 0.0 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
PHFJOIIO_00479 1.6e-188 K Psort location Cytoplasmic, score
PHFJOIIO_00480 4.9e-09 traX S TraX protein
PHFJOIIO_00481 1.2e-131 G Phosphoglycerate mutase family
PHFJOIIO_00482 1.6e-69 S Protein of unknown function (DUF4235)
PHFJOIIO_00483 5.6e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
PHFJOIIO_00484 4.1e-45
PHFJOIIO_00485 1e-144 cobB2 K Sir2 family
PHFJOIIO_00486 1.3e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
PHFJOIIO_00487 1.1e-83 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PHFJOIIO_00488 1e-144 ypfH S Phospholipase/Carboxylesterase
PHFJOIIO_00489 0.0 yjcE P Sodium/hydrogen exchanger family
PHFJOIIO_00490 5.3e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
PHFJOIIO_00491 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
PHFJOIIO_00492 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
PHFJOIIO_00494 9.9e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHFJOIIO_00495 2e-269 KLT Domain of unknown function (DUF4032)
PHFJOIIO_00496 1.2e-144
PHFJOIIO_00497 1.3e-179 3.4.22.70 M Sortase family
PHFJOIIO_00498 1.9e-244 M LPXTG-motif cell wall anchor domain protein
PHFJOIIO_00499 0.0 S LPXTG-motif cell wall anchor domain protein
PHFJOIIO_00500 9.5e-103 L Helix-turn-helix domain
PHFJOIIO_00501 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
PHFJOIIO_00502 3.4e-174 K Psort location Cytoplasmic, score
PHFJOIIO_00503 0.0 KLT Protein tyrosine kinase
PHFJOIIO_00504 2e-151 O Thioredoxin
PHFJOIIO_00506 2.6e-211 S G5
PHFJOIIO_00507 4.8e-171 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PHFJOIIO_00508 6e-167 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PHFJOIIO_00509 6.7e-113 S LytR cell envelope-related transcriptional attenuator
PHFJOIIO_00510 2.8e-279 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
PHFJOIIO_00511 5.2e-124 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
PHFJOIIO_00512 0.0 M Conserved repeat domain
PHFJOIIO_00513 0.0 murJ KLT MviN-like protein
PHFJOIIO_00514 9e-204 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PHFJOIIO_00515 2.6e-242 parB K Belongs to the ParB family
PHFJOIIO_00516 8.5e-179 parA D CobQ CobB MinD ParA nucleotide binding domain protein
PHFJOIIO_00517 1.5e-124 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PHFJOIIO_00518 5e-93 jag S Putative single-stranded nucleic acids-binding domain
PHFJOIIO_00519 1e-171 yidC U Membrane protein insertase, YidC Oxa1 family
PHFJOIIO_00520 4.5e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PHFJOIIO_00521 1.3e-298 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PHFJOIIO_00522 6e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PHFJOIIO_00523 2.1e-241 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PHFJOIIO_00524 1.4e-88 S Protein of unknown function (DUF721)
PHFJOIIO_00525 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHFJOIIO_00526 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PHFJOIIO_00527 1.2e-73 S Transmembrane domain of unknown function (DUF3566)
PHFJOIIO_00528 7.8e-21 abfA1 3.2.1.55 GH51 G arabinose metabolic process
PHFJOIIO_00529 5.1e-186 G Glycosyl hydrolases family 43
PHFJOIIO_00530 5.5e-188 K Periplasmic binding protein domain
PHFJOIIO_00531 2.3e-228 I Serine aminopeptidase, S33
PHFJOIIO_00532 1.5e-08 K helix_turn _helix lactose operon repressor
PHFJOIIO_00534 1.5e-258 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PHFJOIIO_00535 2.5e-124 gntR K FCD
PHFJOIIO_00536 2.5e-50 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PHFJOIIO_00537 0.0 3.2.1.55 GH51 G arabinose metabolic process
PHFJOIIO_00540 0.0 G Glycosyl hydrolase family 20, domain 2
PHFJOIIO_00541 5.7e-189 K helix_turn _helix lactose operon repressor
PHFJOIIO_00542 8.6e-78 ulaC 2.7.1.194, 2.7.1.197, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PHFJOIIO_00543 3.3e-40 ulaC 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PHFJOIIO_00544 5.2e-252 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PHFJOIIO_00545 2.3e-136 S Protein of unknown function DUF45
PHFJOIIO_00546 1.9e-83 dps P Belongs to the Dps family
PHFJOIIO_00547 3.4e-189 yddG EG EamA-like transporter family
PHFJOIIO_00548 4.7e-241 ytfL P Transporter associated domain
PHFJOIIO_00549 1e-93 K helix_turn _helix lactose operon repressor
PHFJOIIO_00550 1.3e-117 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PHFJOIIO_00551 2.9e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
PHFJOIIO_00552 0.0 trxB1 1.8.1.9 C Thioredoxin domain
PHFJOIIO_00553 1.1e-308 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PHFJOIIO_00554 2.8e-238 yhjX EGP Major facilitator Superfamily
PHFJOIIO_00555 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PHFJOIIO_00556 0.0 yjjP S Threonine/Serine exporter, ThrE
PHFJOIIO_00557 3.4e-209 S Amidohydrolase family
PHFJOIIO_00558 1.8e-195 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PHFJOIIO_00559 3.2e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PHFJOIIO_00560 1e-47 S Protein of unknown function (DUF3073)
PHFJOIIO_00561 1.6e-88 K LytTr DNA-binding domain
PHFJOIIO_00562 2e-106 T protein histidine kinase activity
PHFJOIIO_00563 1.5e-202 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PHFJOIIO_00564 7.9e-29 I transferase activity, transferring acyl groups other than amino-acyl groups
PHFJOIIO_00565 0.0 lytC 2.1.1.197, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
PHFJOIIO_00566 2e-172 rfbJ M Glycosyl transferase family 2
PHFJOIIO_00567 0.0
PHFJOIIO_00568 2.1e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PHFJOIIO_00569 1.6e-260 3.6.4.12 K Putative DNA-binding domain
PHFJOIIO_00570 1.3e-289 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PHFJOIIO_00571 1.6e-42 L Transposase DDE domain
PHFJOIIO_00572 3.1e-29 L Transposase
PHFJOIIO_00573 3.1e-192 M Glycosyltransferase like family 2
PHFJOIIO_00574 0.0 rgpF M Rhamnan synthesis protein F
PHFJOIIO_00575 2.5e-294 S Tetratricopeptide repeat
PHFJOIIO_00576 7.7e-206 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
PHFJOIIO_00577 8.7e-131 rgpC U Transport permease protein
PHFJOIIO_00578 1.2e-168 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PHFJOIIO_00579 2.5e-155 L Transposase, Mutator family
PHFJOIIO_00580 1.1e-139 L HTH-like domain
PHFJOIIO_00581 4.4e-258 S Domain of unknown function (DUF4143)
PHFJOIIO_00582 1.7e-16 yccF S Inner membrane component domain
PHFJOIIO_00583 4.5e-12
PHFJOIIO_00584 1.7e-42 cysB 4.2.1.22 EGP Major facilitator Superfamily
PHFJOIIO_00585 4.5e-26 cysB 4.2.1.22 EGP Major facilitator Superfamily
PHFJOIIO_00586 1.3e-245 L Transposase
PHFJOIIO_00587 4.7e-137 L IstB-like ATP binding protein
PHFJOIIO_00588 7.4e-259 EGP Transmembrane secretion effector
PHFJOIIO_00589 8.6e-56 KLT Protein tyrosine kinase
PHFJOIIO_00590 1.5e-157 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
PHFJOIIO_00591 1.1e-28 plyA3 3.2.1.18 GH33 M Parallel beta-helix repeats
PHFJOIIO_00592 2.6e-30 plyA3 3.2.1.18 GH33 M Parallel beta-helix repeats
PHFJOIIO_00593 4.4e-109
PHFJOIIO_00594 4e-192 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
PHFJOIIO_00595 1.8e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PHFJOIIO_00596 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PHFJOIIO_00597 2.3e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PHFJOIIO_00598 2.1e-93 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PHFJOIIO_00599 1.5e-269 yhdG E aromatic amino acid transport protein AroP K03293
PHFJOIIO_00600 2e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PHFJOIIO_00601 2.3e-248 dgt 3.1.5.1 F Phosphohydrolase-associated domain
PHFJOIIO_00602 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PHFJOIIO_00603 3.9e-159 K Helix-turn-helix domain, rpiR family
PHFJOIIO_00604 2.9e-229 K Putative ATP-dependent DNA helicase recG C-terminal
PHFJOIIO_00605 5.3e-44 S Memo-like protein
PHFJOIIO_00607 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PHFJOIIO_00608 3.8e-179 adh3 C Zinc-binding dehydrogenase
PHFJOIIO_00609 4.7e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PHFJOIIO_00610 6.2e-229 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PHFJOIIO_00611 4.3e-73 zur P Belongs to the Fur family
PHFJOIIO_00612 9.8e-45
PHFJOIIO_00613 2.6e-154 S TIGRFAM TIGR03943 family protein
PHFJOIIO_00614 9e-201 ycgR S Predicted permease
PHFJOIIO_00615 6.7e-23 J Ribosomal L32p protein family
PHFJOIIO_00616 8.2e-15 rpmJ J Ribosomal protein L36
PHFJOIIO_00617 2e-42 rpmE2 J Ribosomal protein L31
PHFJOIIO_00618 8.2e-48 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PHFJOIIO_00619 8.8e-47 rpmB J Ribosomal L28 family
PHFJOIIO_00620 1.1e-136 S cobalamin synthesis protein
PHFJOIIO_00621 1.1e-161 P Zinc-uptake complex component A periplasmic
PHFJOIIO_00622 0.0 lysX S Uncharacterised conserved protein (DUF2156)
PHFJOIIO_00623 2.7e-247 S Putative esterase
PHFJOIIO_00624 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PHFJOIIO_00625 1.4e-239 purD 6.3.4.13 F Belongs to the GARS family
PHFJOIIO_00626 2e-186 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PHFJOIIO_00627 1.3e-292 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PHFJOIIO_00628 1.8e-303 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
PHFJOIIO_00629 5.9e-32
PHFJOIIO_00630 1.8e-68 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHFJOIIO_00631 2.2e-23 K DNA-binding transcription factor activity
PHFJOIIO_00632 7.5e-112 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
PHFJOIIO_00633 5.5e-94 S Protein of unknown function (DUF4230)
PHFJOIIO_00634 3.9e-114
PHFJOIIO_00635 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
PHFJOIIO_00636 3.8e-139 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PHFJOIIO_00637 4.6e-233 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PHFJOIIO_00638 0.0 M Parallel beta-helix repeats
PHFJOIIO_00640 2.5e-225 M Glycosyl transferase 4-like domain
PHFJOIIO_00641 1.9e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
PHFJOIIO_00643 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PHFJOIIO_00644 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PHFJOIIO_00645 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PHFJOIIO_00646 8.1e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PHFJOIIO_00647 0.0 S Esterase-like activity of phytase
PHFJOIIO_00648 2.1e-189 EGP Transmembrane secretion effector
PHFJOIIO_00650 3.3e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PHFJOIIO_00651 1.3e-93 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PHFJOIIO_00652 7.6e-238 carA 6.3.5.5 F Belongs to the CarA family
PHFJOIIO_00653 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PHFJOIIO_00654 5.7e-302 gmk 2.4.2.10, 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PHFJOIIO_00655 0.0 S Protein of unknown function DUF262
PHFJOIIO_00656 2.4e-116 K helix_turn_helix, Lux Regulon
PHFJOIIO_00657 8.1e-263 T Histidine kinase
PHFJOIIO_00658 1e-92 S Domain of unknown function (DUF5067)
PHFJOIIO_00659 1.5e-131 ybhL S Belongs to the BI1 family
PHFJOIIO_00660 1.3e-168 ydeD EG EamA-like transporter family
PHFJOIIO_00661 3.2e-121 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
PHFJOIIO_00662 9.6e-280 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PHFJOIIO_00663 5.3e-185 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PHFJOIIO_00664 2.7e-137 fic D Fic/DOC family
PHFJOIIO_00665 0.0 ftsK D FtsK SpoIIIE family protein
PHFJOIIO_00666 1.3e-122 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PHFJOIIO_00667 1.3e-96 cinA 3.5.1.42 S Belongs to the CinA family
PHFJOIIO_00668 2.3e-79 K Helix-turn-helix XRE-family like proteins
PHFJOIIO_00669 8.2e-40 S Protein of unknown function (DUF3046)
PHFJOIIO_00670 3.1e-215 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PHFJOIIO_00671 9.3e-74 recX S Modulates RecA activity
PHFJOIIO_00672 3.6e-27 marR5 K Winged helix DNA-binding domain
PHFJOIIO_00674 6.7e-111 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PHFJOIIO_00675 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PHFJOIIO_00676 6.7e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PHFJOIIO_00677 4.3e-109
PHFJOIIO_00678 3.9e-133 plsC2 2.3.1.51 I Phosphate acyltransferases
PHFJOIIO_00679 0.0 pknL 2.7.11.1 KLT PASTA
PHFJOIIO_00680 8.8e-201 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
PHFJOIIO_00681 1e-122
PHFJOIIO_00682 5.3e-180 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PHFJOIIO_00683 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PHFJOIIO_00684 8.9e-278 aspA 4.3.1.1 E Fumarase C C-terminus
PHFJOIIO_00685 2.1e-49 S Protein of unknown function (DUF2975)
PHFJOIIO_00686 3e-25 yozG K Cro/C1-type HTH DNA-binding domain
PHFJOIIO_00687 0.0 lhr L DEAD DEAH box helicase
PHFJOIIO_00688 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PHFJOIIO_00689 7.2e-236 S Type I phosphodiesterase / nucleotide pyrophosphatase
PHFJOIIO_00690 1.4e-187 S Protein of unknown function (DUF3071)
PHFJOIIO_00691 1.4e-47 S Domain of unknown function (DUF4193)
PHFJOIIO_00692 2.2e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PHFJOIIO_00693 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PHFJOIIO_00694 9e-28
PHFJOIIO_00695 3.6e-233 L Phage integrase family
PHFJOIIO_00696 7.8e-131 fic D Fic/DOC family
PHFJOIIO_00697 1.1e-26
PHFJOIIO_00698 1.6e-26 L DNA integration
PHFJOIIO_00700 4.6e-73 S EcsC protein family
PHFJOIIO_00701 2e-232 hsdM 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
PHFJOIIO_00702 1.1e-205 S HipA-like C-terminal domain
PHFJOIIO_00703 3.1e-34
PHFJOIIO_00704 1.3e-207 E Belongs to the peptidase S1B family
PHFJOIIO_00705 1.1e-39 T Toxic component of a toxin-antitoxin (TA) module
PHFJOIIO_00706 1.1e-49 relB L RelB antitoxin
PHFJOIIO_00707 2.1e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PHFJOIIO_00708 5.5e-166 S Sucrose-6F-phosphate phosphohydrolase
PHFJOIIO_00709 1.3e-91 P ABC-type metal ion transport system permease component
PHFJOIIO_00710 2.7e-224 S Peptidase dimerisation domain
PHFJOIIO_00711 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PHFJOIIO_00712 1.2e-38
PHFJOIIO_00713 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PHFJOIIO_00714 3.9e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PHFJOIIO_00715 4.4e-114 S Protein of unknown function (DUF3000)
PHFJOIIO_00716 2.4e-250 rnd 3.1.13.5 J 3'-5' exonuclease
PHFJOIIO_00717 2.8e-236 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PHFJOIIO_00718 9.1e-251 clcA_2 P Voltage gated chloride channel
PHFJOIIO_00719 1.1e-112 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PHFJOIIO_00720 1.5e-127 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PHFJOIIO_00721 7.7e-244 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PHFJOIIO_00724 1.7e-234 patB 4.4.1.8 E Aminotransferase, class I II
PHFJOIIO_00725 9.1e-226 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PHFJOIIO_00726 8.4e-168 fmt2 3.2.2.10 S Belongs to the LOG family
PHFJOIIO_00727 1.1e-118 safC S O-methyltransferase
PHFJOIIO_00728 6.6e-184 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
PHFJOIIO_00729 3e-71 yraN L Belongs to the UPF0102 family
PHFJOIIO_00730 1.9e-294 comM O Magnesium chelatase, subunit ChlI C-terminal
PHFJOIIO_00731 1.3e-282 dprA 5.99.1.2 LU DNA recombination-mediator protein A
PHFJOIIO_00732 1.3e-57 ybaZ 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PHFJOIIO_00733 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
PHFJOIIO_00734 1.5e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PHFJOIIO_00735 1.6e-157 S Putative ABC-transporter type IV
PHFJOIIO_00736 2.6e-252 metY 2.5.1.49 E Aminotransferase class-V
PHFJOIIO_00737 1.6e-94
PHFJOIIO_00738 2.4e-139
PHFJOIIO_00739 4.2e-35 M Domain of unknown function (DUF1906)
PHFJOIIO_00740 4e-162 V ABC transporter, ATP-binding protein
PHFJOIIO_00741 0.0 MV MacB-like periplasmic core domain
PHFJOIIO_00742 0.0 phoN I PAP2 superfamily
PHFJOIIO_00743 7.9e-132 K helix_turn_helix, Lux Regulon
PHFJOIIO_00744 0.0 tcsS2 T Histidine kinase
PHFJOIIO_00745 1.9e-264 pip 3.4.11.5 S alpha/beta hydrolase fold
PHFJOIIO_00746 1.8e-142 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PHFJOIIO_00747 1.8e-165 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
PHFJOIIO_00748 7.9e-146 P NLPA lipoprotein
PHFJOIIO_00749 1.7e-187 acoA 1.2.4.1 C Dehydrogenase E1 component
PHFJOIIO_00750 7.8e-183 1.2.4.1 C Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit
PHFJOIIO_00751 3e-204 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PHFJOIIO_00752 2.9e-93 metI P Binding-protein-dependent transport system inner membrane component
PHFJOIIO_00753 4.9e-229 mtnE 2.6.1.83 E Aminotransferase class I and II
PHFJOIIO_00754 1.4e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PHFJOIIO_00755 5.2e-248 XK27_00240 K Fic/DOC family
PHFJOIIO_00756 1.9e-119 E Psort location Cytoplasmic, score 8.87
PHFJOIIO_00757 5.6e-59 yccF S Inner membrane component domain
PHFJOIIO_00758 2.3e-156 ksgA 2.1.1.182 J Methyltransferase domain
PHFJOIIO_00759 4.5e-60 S Cupin 2, conserved barrel domain protein
PHFJOIIO_00760 1.1e-258 KLT Protein tyrosine kinase
PHFJOIIO_00761 4.5e-79 K Psort location Cytoplasmic, score
PHFJOIIO_00762 1.1e-149
PHFJOIIO_00763 2.7e-22
PHFJOIIO_00764 9.3e-199 S Short C-terminal domain
PHFJOIIO_00765 3.9e-86 S Helix-turn-helix
PHFJOIIO_00766 2.4e-65 S Zincin-like metallopeptidase
PHFJOIIO_00767 1.2e-34 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
PHFJOIIO_00768 3.9e-25
PHFJOIIO_00769 1.3e-72 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PHFJOIIO_00770 1.2e-125 ypfH S Phospholipase/Carboxylesterase
PHFJOIIO_00771 0.0 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
PHFJOIIO_00773 8.4e-290 2.4.1.166 GT2 M Glycosyltransferase like family 2
PHFJOIIO_00774 3.9e-116 3.1.3.27 E haloacid dehalogenase-like hydrolase
PHFJOIIO_00775 1.9e-144 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
PHFJOIIO_00776 3.5e-186 MA20_14895 S Conserved hypothetical protein 698
PHFJOIIO_00777 5.7e-55 estB S Phospholipase/Carboxylesterase
PHFJOIIO_00778 3.1e-158 3.1.3.73 G Phosphoglycerate mutase family
PHFJOIIO_00779 2.4e-237 rutG F Permease family
PHFJOIIO_00780 1.2e-79 K AraC-like ligand binding domain
PHFJOIIO_00782 4.3e-46 IQ oxidoreductase activity
PHFJOIIO_00783 4.2e-136 ybbM V Uncharacterised protein family (UPF0014)
PHFJOIIO_00784 4.5e-135 ybbL V ATPases associated with a variety of cellular activities
PHFJOIIO_00785 2.4e-161 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PHFJOIIO_00786 3.1e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PHFJOIIO_00787 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
PHFJOIIO_00788 2.3e-87
PHFJOIIO_00789 3.2e-203 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PHFJOIIO_00790 1.3e-215 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PHFJOIIO_00791 1.7e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PHFJOIIO_00792 1.2e-246 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
PHFJOIIO_00793 5e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PHFJOIIO_00794 7.1e-84 argR K Regulates arginine biosynthesis genes
PHFJOIIO_00795 4.1e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PHFJOIIO_00796 7.3e-251 K Putative DNA-binding domain
PHFJOIIO_00797 1.5e-45 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PHFJOIIO_00798 2.2e-179 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PHFJOIIO_00799 1.4e-281 argH 4.3.2.1 E argininosuccinate lyase
PHFJOIIO_00800 7.2e-109 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PHFJOIIO_00801 2.3e-142 S Putative ABC-transporter type IV
PHFJOIIO_00802 1.4e-253 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PHFJOIIO_00803 6.1e-159 L Tetratricopeptide repeat
PHFJOIIO_00804 2.3e-190 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PHFJOIIO_00806 3.6e-137 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PHFJOIIO_00807 1e-103
PHFJOIIO_00808 2e-115 trkA P TrkA-N domain
PHFJOIIO_00809 5e-236 trkB P Cation transport protein
PHFJOIIO_00810 7.3e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PHFJOIIO_00811 4.9e-294 recN L May be involved in recombinational repair of damaged DNA
PHFJOIIO_00812 8.9e-124 S Haloacid dehalogenase-like hydrolase
PHFJOIIO_00813 3.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
PHFJOIIO_00814 8.6e-176 V ATPases associated with a variety of cellular activities
PHFJOIIO_00815 5.9e-124 S ABC-2 family transporter protein
PHFJOIIO_00816 3e-117 S ABC-2 family transporter protein
PHFJOIIO_00817 6.6e-284 thrC 4.2.3.1 E Threonine synthase N terminus
PHFJOIIO_00818 3.1e-237 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PHFJOIIO_00819 2.8e-94
PHFJOIIO_00820 1.2e-143 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PHFJOIIO_00821 9.1e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PHFJOIIO_00823 4.6e-263 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PHFJOIIO_00824 4.6e-68 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PHFJOIIO_00825 4.2e-138 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PHFJOIIO_00826 1.3e-78 S Bacterial PH domain
PHFJOIIO_00827 3.2e-255 nplT 3.2.1.1 GH13 G Alpha amylase, catalytic domain
PHFJOIIO_00829 3e-101
PHFJOIIO_00830 1.1e-132 C Putative TM nitroreductase
PHFJOIIO_00831 7.5e-142 yijF S Domain of unknown function (DUF1287)
PHFJOIIO_00832 2.7e-70 pdxH S Pfam:Pyridox_oxidase
PHFJOIIO_00833 4.3e-144 KT RESPONSE REGULATOR receiver
PHFJOIIO_00834 2.8e-193 V VanZ like family
PHFJOIIO_00835 2.3e-110 ycaK 1.6.5.2 S NADPH-dependent FMN reductase
PHFJOIIO_00836 3.2e-56 ypjC S Putative ABC-transporter type IV
PHFJOIIO_00837 3.1e-156
PHFJOIIO_00839 4.7e-112 EGP Major facilitator Superfamily
PHFJOIIO_00840 2e-17 EGP Major facilitator Superfamily
PHFJOIIO_00841 3.2e-162 rpoC M heme binding
PHFJOIIO_00842 5.8e-77 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PHFJOIIO_00843 1.3e-30
PHFJOIIO_00844 1.4e-132 S SOS response associated peptidase (SRAP)
PHFJOIIO_00845 5.9e-77 qseC 2.7.13.3 T Histidine kinase
PHFJOIIO_00846 4.5e-185 S Acetyltransferase (GNAT) domain
PHFJOIIO_00848 1.4e-33 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PHFJOIIO_00849 6.9e-37 2.7.7.1, 3.6.1.13, 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
PHFJOIIO_00850 7e-56 K Transcriptional regulator
PHFJOIIO_00851 8.3e-90 MA20_25245 K FR47-like protein
PHFJOIIO_00852 8.4e-119 ydaF_1 J Acetyltransferase (GNAT) domain
PHFJOIIO_00853 1.7e-63 yeaO K Protein of unknown function, DUF488
PHFJOIIO_00854 1.2e-160 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PHFJOIIO_00855 5.7e-283 S Psort location Cytoplasmic, score 8.87
PHFJOIIO_00856 1.9e-112 S Domain of unknown function (DUF4194)
PHFJOIIO_00857 0.0 S Psort location Cytoplasmic, score 8.87
PHFJOIIO_00858 1.2e-299 E Serine carboxypeptidase
PHFJOIIO_00859 8.9e-161 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PHFJOIIO_00860 4.8e-171 corA P CorA-like Mg2+ transporter protein
PHFJOIIO_00861 2.9e-168 ET Bacterial periplasmic substrate-binding proteins
PHFJOIIO_00862 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PHFJOIIO_00863 4.2e-91 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
PHFJOIIO_00864 0.0 comE S Competence protein
PHFJOIIO_00865 8.1e-182 holA 2.7.7.7 L DNA polymerase III delta subunit
PHFJOIIO_00866 1.7e-119 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
PHFJOIIO_00867 2.3e-159 yeaZ 2.3.1.234 O Glycoprotease family
PHFJOIIO_00868 1.2e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
PHFJOIIO_00869 1.4e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PHFJOIIO_00871 1.1e-131 M Peptidase family M23
PHFJOIIO_00872 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
PHFJOIIO_00873 5.1e-274 G ABC transporter substrate-binding protein
PHFJOIIO_00874 3.3e-241 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
PHFJOIIO_00875 2.5e-200 guaB 1.1.1.205 F IMP dehydrogenase family protein
PHFJOIIO_00876 4.8e-90
PHFJOIIO_00877 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
PHFJOIIO_00878 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PHFJOIIO_00879 1.4e-145 rpsB J Belongs to the universal ribosomal protein uS2 family
PHFJOIIO_00880 4.8e-146 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PHFJOIIO_00881 1e-127 3.2.1.8 S alpha beta
PHFJOIIO_00882 7e-133 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PHFJOIIO_00883 2.4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PHFJOIIO_00884 1.8e-176 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
PHFJOIIO_00885 8.3e-229 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PHFJOIIO_00886 1.4e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PHFJOIIO_00887 2e-73 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PHFJOIIO_00888 1.8e-303 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PHFJOIIO_00889 1.1e-242 G Bacterial extracellular solute-binding protein
PHFJOIIO_00890 1.4e-173 G Binding-protein-dependent transport system inner membrane component
PHFJOIIO_00891 9.4e-167 G ABC transporter permease
PHFJOIIO_00892 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
PHFJOIIO_00893 6.9e-178 2.7.1.2 GK ROK family
PHFJOIIO_00894 2.4e-217 GK ROK family
PHFJOIIO_00895 4e-206 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
PHFJOIIO_00896 2.1e-306 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PHFJOIIO_00897 7.2e-197 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PHFJOIIO_00898 8.9e-303 ybiT S ABC transporter
PHFJOIIO_00899 1.7e-139 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PHFJOIIO_00900 1.8e-233 qseC 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PHFJOIIO_00901 3.3e-118 K Transcriptional regulatory protein, C terminal
PHFJOIIO_00902 8.1e-59 V MacB-like periplasmic core domain
PHFJOIIO_00903 3e-74
PHFJOIIO_00904 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PHFJOIIO_00905 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PHFJOIIO_00906 2.6e-180 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
PHFJOIIO_00907 7.6e-177 rapZ S Displays ATPase and GTPase activities
PHFJOIIO_00908 3.1e-173 whiA K May be required for sporulation
PHFJOIIO_00909 2e-222 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
PHFJOIIO_00910 5.3e-147 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PHFJOIIO_00911 8e-33 secG U Preprotein translocase SecG subunit
PHFJOIIO_00912 3.1e-178 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PHFJOIIO_00913 6.1e-162 S Sucrose-6F-phosphate phosphohydrolase
PHFJOIIO_00914 3.1e-243 mepA_6 V MatE
PHFJOIIO_00917 8.3e-252 brnQ U Component of the transport system for branched-chain amino acids
PHFJOIIO_00918 1.2e-143 yoaK S Protein of unknown function (DUF1275)
PHFJOIIO_00919 1e-201 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PHFJOIIO_00920 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
PHFJOIIO_00921 1.4e-218 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PHFJOIIO_00922 3.4e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PHFJOIIO_00923 7.1e-160 G Fructosamine kinase
PHFJOIIO_00924 5e-168 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PHFJOIIO_00925 2.8e-156 S PAC2 family
PHFJOIIO_00929 1.2e-211
PHFJOIIO_00933 1.7e-250 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PHFJOIIO_00934 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PHFJOIIO_00935 0.0 3.2.1.52 GH20 M Glycosyl hydrolase family 20, catalytic domain
PHFJOIIO_00936 1e-131 yebC K transcriptional regulatory protein
PHFJOIIO_00937 1.8e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PHFJOIIO_00938 2.5e-104 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PHFJOIIO_00939 1.8e-201 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PHFJOIIO_00940 2.6e-44 yajC U Preprotein translocase subunit
PHFJOIIO_00941 5.5e-101 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PHFJOIIO_00942 1.9e-225 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PHFJOIIO_00943 1.1e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PHFJOIIO_00944 2.2e-246
PHFJOIIO_00945 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PHFJOIIO_00946 5.7e-30
PHFJOIIO_00947 2e-102 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PHFJOIIO_00948 7.5e-146 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PHFJOIIO_00949 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
PHFJOIIO_00950 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PHFJOIIO_00951 4.9e-162 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PHFJOIIO_00952 3.5e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PHFJOIIO_00953 6.3e-101 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
PHFJOIIO_00954 6.4e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
PHFJOIIO_00955 1.8e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
PHFJOIIO_00956 1.4e-116 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PHFJOIIO_00957 9e-173 S Bacterial protein of unknown function (DUF881)
PHFJOIIO_00958 2.6e-31 sbp S Protein of unknown function (DUF1290)
PHFJOIIO_00959 3.4e-141 S Bacterial protein of unknown function (DUF881)
PHFJOIIO_00960 9.6e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
PHFJOIIO_00961 3e-119 K helix_turn_helix, mercury resistance
PHFJOIIO_00962 7.3e-62
PHFJOIIO_00964 3.3e-24 L DNA integration
PHFJOIIO_00965 7.2e-126 S GyrI-like small molecule binding domain
PHFJOIIO_00966 1.1e-89 K Putative zinc ribbon domain
PHFJOIIO_00969 1.1e-141 pgp 3.1.3.18 S HAD-hyrolase-like
PHFJOIIO_00970 2.5e-61 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PHFJOIIO_00971 0.0 helY L DEAD DEAH box helicase
PHFJOIIO_00972 1e-51
PHFJOIIO_00973 0.0 pafB K WYL domain
PHFJOIIO_00974 5.1e-289 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
PHFJOIIO_00976 1.3e-90 dkgB S Oxidoreductase, aldo keto reductase family protein
PHFJOIIO_00977 1.5e-143 4.1.1.44 S Carboxymuconolactone decarboxylase family
PHFJOIIO_00979 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PHFJOIIO_00980 1.5e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PHFJOIIO_00981 8.1e-171 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
PHFJOIIO_00982 6.2e-85 T Domain of unknown function (DUF4234)
PHFJOIIO_00983 1.9e-101 K Bacterial regulatory proteins, tetR family
PHFJOIIO_00984 3.2e-46 tam 2.1.1.144, 2.1.1.197 FG trans-aconitate 2-methyltransferase activity
PHFJOIIO_00985 3.7e-41 K Helix-turn-helix
PHFJOIIO_00986 1e-223 hipA 2.7.11.1 S HipA N-terminal domain
PHFJOIIO_00987 2.7e-69 4.1.1.44 S Cupin domain
PHFJOIIO_00988 2.3e-176 S Membrane transport protein
PHFJOIIO_00989 1e-93 laaE K Transcriptional regulator PadR-like family
PHFJOIIO_00990 2.3e-133 magIII L endonuclease III
PHFJOIIO_00991 2.1e-131 S Enoyl-(Acyl carrier protein) reductase
PHFJOIIO_00992 4.8e-241 vbsD V MatE
PHFJOIIO_00993 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PHFJOIIO_00994 9.1e-16 KLT Protein tyrosine kinase
PHFJOIIO_00995 1.3e-16 K Psort location Cytoplasmic, score
PHFJOIIO_00996 2.3e-135
PHFJOIIO_00997 1.6e-191 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PHFJOIIO_00998 6.5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PHFJOIIO_00999 1.6e-179 pyrD 1.3.1.14 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PHFJOIIO_01000 1.5e-155 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PHFJOIIO_01001 6.8e-181 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
PHFJOIIO_01002 4.2e-280 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PHFJOIIO_01003 2e-73 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PHFJOIIO_01004 6.4e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PHFJOIIO_01005 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PHFJOIIO_01006 7.7e-07
PHFJOIIO_01007 2.6e-160 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
PHFJOIIO_01008 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PHFJOIIO_01009 3.4e-100 sixA T Phosphoglycerate mutase family
PHFJOIIO_01010 3.3e-208 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PHFJOIIO_01011 1.1e-177 I alpha/beta hydrolase fold
PHFJOIIO_01012 5.8e-25 rarD S Rard protein
PHFJOIIO_01013 1.3e-75 rarD 3.4.17.13 E Rard protein
PHFJOIIO_01014 4.5e-19
PHFJOIIO_01015 0.0 S Protein of unknown function DUF262
PHFJOIIO_01016 9.3e-152
PHFJOIIO_01017 0.0 L helicase
PHFJOIIO_01018 8.2e-123 S Domain of unknown function (DUF4391)
PHFJOIIO_01019 3.9e-244 2.1.1.72 L DNA methylase
PHFJOIIO_01020 0.0 res 3.1.21.5 V Type III restriction enzyme, res subunit
PHFJOIIO_01021 2.2e-55 S MTH538 TIR-like domain (DUF1863)
PHFJOIIO_01022 6e-128 XK26_04895
PHFJOIIO_01023 7.2e-107 int8 L Phage integrase family
PHFJOIIO_01025 2.8e-07
PHFJOIIO_01026 2.8e-263
PHFJOIIO_01027 1.6e-296 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
PHFJOIIO_01029 1.8e-218 3.1.21.3 V Type I restriction modification DNA specificity domain
PHFJOIIO_01030 4.1e-178 V Abi-like protein
PHFJOIIO_01031 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PHFJOIIO_01032 3e-228 2.7.7.7 L Transposase and inactivated derivatives
PHFJOIIO_01033 1.5e-58 S Bacterial mobilisation protein (MobC)
PHFJOIIO_01034 0.0 ltrBE1 U Relaxase/Mobilisation nuclease domain
PHFJOIIO_01035 1.5e-95
PHFJOIIO_01036 1.6e-246 3.5.1.104 G Polysaccharide deacetylase
PHFJOIIO_01037 1.2e-199 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PHFJOIIO_01038 3e-68 D AAA domain, putative AbiEii toxin, Type IV TA system
PHFJOIIO_01039 3.9e-10 V TIGR02646 family
PHFJOIIO_01040 1.7e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PHFJOIIO_01041 5.7e-164 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHFJOIIO_01042 1.5e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PHFJOIIO_01043 2.1e-191 K helix_turn _helix lactose operon repressor
PHFJOIIO_01044 5.5e-74 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
PHFJOIIO_01045 9.4e-295 scrT G Transporter major facilitator family protein
PHFJOIIO_01046 9.5e-253 yhjE EGP Sugar (and other) transporter
PHFJOIIO_01047 2.8e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PHFJOIIO_01048 2.7e-80 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PHFJOIIO_01049 4e-83 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PHFJOIIO_01050 2.6e-183 gmk 1.1.1.23, 2.7.4.8 S Protein of unknown function (DUF559)
PHFJOIIO_01051 0.0 lacZ 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PHFJOIIO_01052 9.6e-275 aroP E aromatic amino acid transport protein AroP K03293
PHFJOIIO_01053 2.4e-101 K Transcriptional regulator C-terminal region
PHFJOIIO_01054 2.6e-129 V ABC transporter
PHFJOIIO_01055 0.0 V FtsX-like permease family
PHFJOIIO_01056 1.9e-83 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PHFJOIIO_01057 3e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PHFJOIIO_01058 2.6e-39 E ABC transporter
PHFJOIIO_01059 7.6e-100 bcp 1.11.1.15 O Redoxin
PHFJOIIO_01060 4.5e-156 S Virulence factor BrkB
PHFJOIIO_01061 2.1e-41 XAC3035 O Glutaredoxin
PHFJOIIO_01062 7.8e-14
PHFJOIIO_01064 4.8e-122 O Subtilase family
PHFJOIIO_01065 1e-74
PHFJOIIO_01066 6.3e-23
PHFJOIIO_01067 3.4e-84
PHFJOIIO_01069 1.3e-16 M Belongs to the glycosyl hydrolase 30 family
PHFJOIIO_01070 2e-93 M Belongs to the glycosyl hydrolase 30 family
PHFJOIIO_01071 1.1e-189 1.1.1.65 C Aldo/keto reductase family
PHFJOIIO_01072 1.2e-42 S Protein of unknown function (DUF1778)
PHFJOIIO_01073 5.9e-94 ydgJ K helix_turn_helix multiple antibiotic resistance protein
PHFJOIIO_01074 0.0 lmrA1 V ABC transporter, ATP-binding protein
PHFJOIIO_01075 0.0 lmrA2 V ABC transporter transmembrane region
PHFJOIIO_01076 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
PHFJOIIO_01077 1.3e-107 S Phosphatidylethanolamine-binding protein
PHFJOIIO_01078 0.0 pepD E Peptidase family C69
PHFJOIIO_01079 3.8e-287 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
PHFJOIIO_01080 3e-62 S Macrophage migration inhibitory factor (MIF)
PHFJOIIO_01081 1.5e-97 S GtrA-like protein
PHFJOIIO_01082 6.2e-263 EGP Major facilitator Superfamily
PHFJOIIO_01083 1.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
PHFJOIIO_01084 2.1e-142
PHFJOIIO_01085 1.4e-136 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
PHFJOIIO_01086 8.6e-201 P NMT1/THI5 like
PHFJOIIO_01087 3.1e-124 S HAD hydrolase, family IA, variant 3
PHFJOIIO_01089 5.3e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PHFJOIIO_01090 6.3e-96 S Domain of unknown function (DUF4143)
PHFJOIIO_01091 3.3e-43 S Domain of unknown function (DUF4143)
PHFJOIIO_01094 4.4e-252 S Calcineurin-like phosphoesterase
PHFJOIIO_01095 2.8e-138 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
PHFJOIIO_01096 8.4e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PHFJOIIO_01097 3.8e-133 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PHFJOIIO_01098 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
PHFJOIIO_01100 5.4e-182 S CAAX protease self-immunity
PHFJOIIO_01101 3.6e-221 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
PHFJOIIO_01102 9.8e-255 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PHFJOIIO_01103 3.3e-226 G Transmembrane secretion effector
PHFJOIIO_01104 7.3e-132 K Bacterial regulatory proteins, tetR family
PHFJOIIO_01105 2.9e-128
PHFJOIIO_01106 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PHFJOIIO_01107 6.1e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PHFJOIIO_01108 8.3e-166 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
PHFJOIIO_01109 7.1e-187
PHFJOIIO_01110 7.9e-180
PHFJOIIO_01111 3.8e-163 trxA2 O Tetratricopeptide repeat
PHFJOIIO_01112 2.8e-119 cyaA 4.6.1.1 S CYTH
PHFJOIIO_01114 1.4e-184 K Bacterial regulatory proteins, lacI family
PHFJOIIO_01115 1e-16 4.2.1.68 M carboxylic acid catabolic process
PHFJOIIO_01116 3.2e-64 4.2.1.68 M Enolase C-terminal domain-like
PHFJOIIO_01117 1.2e-15 IQ KR domain
PHFJOIIO_01118 1.4e-135 IQ KR domain
PHFJOIIO_01120 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
PHFJOIIO_01121 5.2e-63 psp1 3.5.99.10 J Endoribonuclease L-PSP
PHFJOIIO_01122 3.4e-180 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PHFJOIIO_01123 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PHFJOIIO_01124 8.2e-304 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PHFJOIIO_01125 1.9e-81 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PHFJOIIO_01126 2.9e-290 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
PHFJOIIO_01127 5.2e-240 hom 1.1.1.3 E Homoserine dehydrogenase
PHFJOIIO_01128 3.5e-188 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PHFJOIIO_01129 9.5e-280 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
PHFJOIIO_01130 5.8e-67
PHFJOIIO_01131 2.1e-58
PHFJOIIO_01132 4.9e-165 V ATPases associated with a variety of cellular activities
PHFJOIIO_01133 3.3e-256 V Efflux ABC transporter, permease protein
PHFJOIIO_01134 2.2e-168 mdcF S Transporter, auxin efflux carrier (AEC) family protein
PHFJOIIO_01135 7.6e-241 dapE 3.5.1.18 E Peptidase dimerisation domain
PHFJOIIO_01136 0.0 rne 3.1.26.12 J Ribonuclease E/G family
PHFJOIIO_01137 3.2e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PHFJOIIO_01138 3.1e-40 rpmA J Ribosomal L27 protein
PHFJOIIO_01139 3.7e-215 K Psort location Cytoplasmic, score
PHFJOIIO_01140 6.3e-299 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PHFJOIIO_01141 4.1e-201 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PHFJOIIO_01142 7.6e-230 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
PHFJOIIO_01144 1.2e-30 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PHFJOIIO_01145 3.5e-117 nusG K Participates in transcription elongation, termination and antitermination
PHFJOIIO_01146 2.8e-173 plsC2 2.3.1.51 I Phosphate acyltransferases
PHFJOIIO_01147 2.8e-177 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PHFJOIIO_01148 1.4e-217 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PHFJOIIO_01149 3.1e-200 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PHFJOIIO_01150 0.0 3.2.1.97 GH101 G Glycosyl hydrolase 101 beta sandwich domain
PHFJOIIO_01151 6.9e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PHFJOIIO_01152 0.0 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PHFJOIIO_01153 2.4e-114
PHFJOIIO_01154 1.8e-168 T Pfam Adenylate and Guanylate cyclase catalytic domain
PHFJOIIO_01155 6.1e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
PHFJOIIO_01156 1.1e-79 ssb1 L Single-stranded DNA-binding protein
PHFJOIIO_01157 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PHFJOIIO_01158 1.9e-69 rplI J Binds to the 23S rRNA
PHFJOIIO_01159 2e-35 S Parallel beta-helix repeats
PHFJOIIO_01160 6.1e-67 E Domain of unknown function (DUF5011)
PHFJOIIO_01162 3.7e-131 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PHFJOIIO_01163 3.9e-129 M Protein of unknown function (DUF3152)
PHFJOIIO_01164 9.2e-186 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
PHFJOIIO_01165 2.2e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PHFJOIIO_01166 3.6e-53 acyP 3.6.1.7 C Acylphosphatase
PHFJOIIO_01167 0.0 inlJ M domain protein
PHFJOIIO_01168 4.9e-277 M LPXTG cell wall anchor motif
PHFJOIIO_01169 9.1e-212 3.4.22.70 M Sortase family
PHFJOIIO_01170 2e-56 S Domain of unknown function (DUF4854)
PHFJOIIO_01171 4.2e-155 fahA Q Fumarylacetoacetate (FAA) hydrolase family
PHFJOIIO_01172 1.9e-30 2.1.1.72 S Protein conserved in bacteria
PHFJOIIO_01173 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PHFJOIIO_01174 1.6e-132 M Mechanosensitive ion channel
PHFJOIIO_01175 3.8e-119 K Bacterial regulatory proteins, tetR family
PHFJOIIO_01176 6.5e-240 MA20_36090 S Psort location Cytoplasmic, score 8.87
PHFJOIIO_01177 1.2e-232 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
PHFJOIIO_01178 5.4e-66
PHFJOIIO_01180 3e-41 K Transcriptional regulator
PHFJOIIO_01181 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PHFJOIIO_01182 3.5e-07 S Scramblase
PHFJOIIO_01183 1.9e-36
PHFJOIIO_01188 4e-22 tam 2.1.1.144, 2.1.1.197 S Methyltransferase domain
PHFJOIIO_01189 1.3e-12 tam 2.1.1.144, 2.1.1.197 S Methyltransferase domain
PHFJOIIO_01190 3e-237 K Helix-turn-helix XRE-family like proteins
PHFJOIIO_01191 3.7e-54 relB L RelB antitoxin
PHFJOIIO_01192 1.3e-08 T Toxic component of a toxin-antitoxin (TA) module
PHFJOIIO_01193 1.2e-129 K helix_turn_helix, mercury resistance
PHFJOIIO_01194 4.3e-242 yxiO S Vacuole effluxer Atg22 like
PHFJOIIO_01196 7.2e-200 yegV G pfkB family carbohydrate kinase
PHFJOIIO_01197 1.4e-29 rpmB J Ribosomal L28 family
PHFJOIIO_01198 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
PHFJOIIO_01199 1.5e-215 steT E amino acid
PHFJOIIO_01202 0.0
PHFJOIIO_01203 7.6e-249 U Sodium:dicarboxylate symporter family
PHFJOIIO_01204 5.8e-121 rsmD 2.1.1.171 L Conserved hypothetical protein 95
PHFJOIIO_01205 6.3e-108 XK27_02070 S Nitroreductase family
PHFJOIIO_01206 3.8e-81 hsp20 O Hsp20/alpha crystallin family
PHFJOIIO_01207 4.3e-162 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PHFJOIIO_01208 6.4e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PHFJOIIO_01209 1.8e-34 CP_0960 S Belongs to the UPF0109 family
PHFJOIIO_01210 1e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PHFJOIIO_01211 1.5e-294 ydfD EK Alanine-glyoxylate amino-transferase
PHFJOIIO_01212 3.2e-92 argO S LysE type translocator
PHFJOIIO_01213 2.6e-219 S Endonuclease/Exonuclease/phosphatase family
PHFJOIIO_01214 3.5e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PHFJOIIO_01215 3.5e-163 P Cation efflux family
PHFJOIIO_01216 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
PHFJOIIO_01217 2.3e-136 guaA1 6.3.5.2 F Peptidase C26
PHFJOIIO_01218 0.0 yjjK S ABC transporter
PHFJOIIO_01219 2e-58 S Protein of unknown function (DUF3039)
PHFJOIIO_01220 2.4e-89 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PHFJOIIO_01221 5.2e-106
PHFJOIIO_01222 1e-113 yceD S Uncharacterized ACR, COG1399
PHFJOIIO_01223 2.3e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PHFJOIIO_01224 2.3e-139 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PHFJOIIO_01225 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
PHFJOIIO_01226 7.6e-92 ilvN 2.2.1.6 E ACT domain
PHFJOIIO_01228 1.7e-246 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PHFJOIIO_01229 2.1e-134 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PHFJOIIO_01230 4.8e-117 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PHFJOIIO_01231 7.6e-175 S Auxin Efflux Carrier
PHFJOIIO_01234 0.0 pgi 5.3.1.9 G Belongs to the GPI family
PHFJOIIO_01235 1.5e-190
PHFJOIIO_01237 6.9e-201
PHFJOIIO_01239 3e-120 mgtC S MgtC family
PHFJOIIO_01240 0.0 mgtA 3.6.3.2 P Cation transporting ATPase, C-terminus
PHFJOIIO_01241 5.5e-270 abcT3 P ATPases associated with a variety of cellular activities
PHFJOIIO_01242 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
PHFJOIIO_01243 1.4e-173 K Putative sugar-binding domain
PHFJOIIO_01244 8.8e-213 gatC G PTS system sugar-specific permease component
PHFJOIIO_01245 1.1e-294 2.7.1.53 G FGGY family of carbohydrate kinases, C-terminal domain
PHFJOIIO_01246 1.1e-172 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
PHFJOIIO_01247 1.1e-129 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
PHFJOIIO_01248 5.6e-62 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PHFJOIIO_01249 1.3e-156 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PHFJOIIO_01250 2.5e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PHFJOIIO_01251 1e-201 K helix_turn _helix lactose operon repressor
PHFJOIIO_01252 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PHFJOIIO_01253 6.9e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PHFJOIIO_01254 2.1e-111 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PHFJOIIO_01257 3.9e-245 G Glycosyl hydrolases family 43
PHFJOIIO_01258 5e-202 K helix_turn _helix lactose operon repressor
PHFJOIIO_01260 2.9e-170 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
PHFJOIIO_01261 2.9e-122 L Protein of unknown function (DUF1524)
PHFJOIIO_01262 2.5e-226 mntH P H( )-stimulated, divalent metal cation uptake system
PHFJOIIO_01263 5.3e-306 EGP Major facilitator Superfamily
PHFJOIIO_01264 2e-217
PHFJOIIO_01265 5e-179 S G5
PHFJOIIO_01266 1.5e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
PHFJOIIO_01267 1.4e-118 F Domain of unknown function (DUF4916)
PHFJOIIO_01268 4.9e-159 mhpC I Alpha/beta hydrolase family
PHFJOIIO_01269 2.4e-08 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PHFJOIIO_01270 0.0 enhA_2 S L,D-transpeptidase catalytic domain
PHFJOIIO_01271 3.7e-72 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PHFJOIIO_01272 1.1e-240 S Uncharacterized conserved protein (DUF2183)
PHFJOIIO_01273 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
PHFJOIIO_01274 2e-191 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PHFJOIIO_01275 9.9e-120 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
PHFJOIIO_01276 1.6e-134 glxR K helix_turn_helix, cAMP Regulatory protein
PHFJOIIO_01277 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PHFJOIIO_01278 1.9e-219 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
PHFJOIIO_01279 6.7e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PHFJOIIO_01280 3.1e-139 glpR K DeoR C terminal sensor domain
PHFJOIIO_01281 3.3e-252 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
PHFJOIIO_01282 1.3e-232 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
PHFJOIIO_01283 1.1e-242 EGP Sugar (and other) transporter
PHFJOIIO_01284 4.2e-43 gcvR T Belongs to the UPF0237 family
PHFJOIIO_01285 9.4e-253 S UPF0210 protein
PHFJOIIO_01286 1.8e-186 S Membrane
PHFJOIIO_01287 6.3e-122 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PHFJOIIO_01288 8.7e-68 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G Putative cell wall binding repeat
PHFJOIIO_01289 3.8e-36 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G xyloglucan:xyloglucosyl transferase activity
PHFJOIIO_01290 3e-184 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
PHFJOIIO_01291 2e-99
PHFJOIIO_01292 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHFJOIIO_01293 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PHFJOIIO_01294 5e-96 T Forkhead associated domain
PHFJOIIO_01295 1.1e-67 B Belongs to the OprB family
PHFJOIIO_01296 1.3e-165 3.1.3.16 T Sigma factor PP2C-like phosphatases
PHFJOIIO_01297 0.0 E Transglutaminase-like superfamily
PHFJOIIO_01298 7.3e-226 S Protein of unknown function DUF58
PHFJOIIO_01299 9.7e-231 S ATPase family associated with various cellular activities (AAA)
PHFJOIIO_01300 0.0 S Fibronectin type 3 domain
PHFJOIIO_01301 4.5e-266 KLT Protein tyrosine kinase
PHFJOIIO_01302 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
PHFJOIIO_01303 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
PHFJOIIO_01304 2.6e-147 K -acetyltransferase
PHFJOIIO_01305 3.8e-249 G Major Facilitator Superfamily
PHFJOIIO_01306 8.9e-26 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
PHFJOIIO_01307 6.4e-24 relB L RelB antitoxin
PHFJOIIO_01308 5.5e-35 L Transposase
PHFJOIIO_01309 1e-132 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PHFJOIIO_01310 8.5e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PHFJOIIO_01311 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PHFJOIIO_01312 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
PHFJOIIO_01313 4.3e-292 O Subtilase family
PHFJOIIO_01314 1.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PHFJOIIO_01315 2.6e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PHFJOIIO_01316 2e-269 S zinc finger
PHFJOIIO_01317 4.5e-112 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PHFJOIIO_01318 2.9e-229 aspB E Aminotransferase class-V
PHFJOIIO_01319 4.5e-52 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PHFJOIIO_01320 1.1e-130 tmp1 S Domain of unknown function (DUF4391)
PHFJOIIO_01321 1.7e-148 moeB 2.7.7.80 H ThiF family
PHFJOIIO_01322 5.5e-242 cdr OP Sulfurtransferase TusA
PHFJOIIO_01323 1.1e-181 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PHFJOIIO_01326 2.5e-203 S Endonuclease/Exonuclease/phosphatase family
PHFJOIIO_01327 7.8e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHFJOIIO_01328 8.5e-273 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PHFJOIIO_01329 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
PHFJOIIO_01330 7.3e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PHFJOIIO_01332 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
PHFJOIIO_01333 1.5e-161
PHFJOIIO_01334 1e-256 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
PHFJOIIO_01335 2.2e-298 plyA3 3.2.1.18 GH33 M Parallel beta-helix repeats
PHFJOIIO_01336 4.3e-63 plyA3 M Parallel beta-helix repeats
PHFJOIIO_01337 5.8e-89 K MarR family
PHFJOIIO_01338 0.0 V ABC transporter, ATP-binding protein
PHFJOIIO_01339 0.0 V ABC transporter transmembrane region
PHFJOIIO_01340 2.6e-167 S Patatin-like phospholipase
PHFJOIIO_01341 1.9e-152 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PHFJOIIO_01342 2.8e-168 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PHFJOIIO_01343 7.6e-115 S Vitamin K epoxide reductase
PHFJOIIO_01344 4.8e-165 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
PHFJOIIO_01345 6.1e-32 S Protein of unknown function (DUF3107)
PHFJOIIO_01346 2.7e-245 mphA S Aminoglycoside phosphotransferase
PHFJOIIO_01347 1.5e-280 uvrD2 3.6.4.12 L DNA helicase
PHFJOIIO_01348 6.6e-279 S Zincin-like metallopeptidase
PHFJOIIO_01349 1.7e-151 lon T Belongs to the peptidase S16 family
PHFJOIIO_01350 5.7e-47 S Protein of unknown function (DUF3052)
PHFJOIIO_01351 5.2e-195 K helix_turn _helix lactose operon repressor
PHFJOIIO_01352 3.3e-59 S Thiamine-binding protein
PHFJOIIO_01353 5.4e-164 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PHFJOIIO_01354 6.9e-231 O AAA domain (Cdc48 subfamily)
PHFJOIIO_01355 1.3e-84
PHFJOIIO_01356 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PHFJOIIO_01357 6.8e-159 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PHFJOIIO_01358 0.0 lacZ 3.2.1.23 G Domain of unknown function (DUF4982)
PHFJOIIO_01359 2.6e-299 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
PHFJOIIO_01360 9.5e-247 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PHFJOIIO_01361 6.8e-229 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PHFJOIIO_01362 4.3e-80 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PHFJOIIO_01363 2.1e-42 yggT S YGGT family
PHFJOIIO_01364 9.7e-90 3.1.21.3 V DivIVA protein
PHFJOIIO_01365 3.4e-102 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PHFJOIIO_01366 3.4e-177 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PHFJOIIO_01368 6e-63
PHFJOIIO_01369 2e-146 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PHFJOIIO_01370 3.7e-202 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PHFJOIIO_01371 2e-189 ftsE D Cell division ATP-binding protein FtsE
PHFJOIIO_01372 1.2e-158 ftsX D Part of the ABC transporter FtsEX involved in cellular division
PHFJOIIO_01373 6.5e-159 usp 3.5.1.28 CBM50 D CHAP domain protein
PHFJOIIO_01374 3e-76 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PHFJOIIO_01375 1.4e-149 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
PHFJOIIO_01376 5.7e-19
PHFJOIIO_01377 8.7e-24
PHFJOIIO_01379 1.5e-201 2.7.11.1 NU Tfp pilus assembly protein FimV
PHFJOIIO_01380 1.5e-222 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PHFJOIIO_01381 6.1e-236 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PHFJOIIO_01382 1.2e-291 I acetylesterase activity
PHFJOIIO_01383 3.6e-140 recO L Involved in DNA repair and RecF pathway recombination
PHFJOIIO_01384 1.8e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PHFJOIIO_01385 1.6e-190 ywqG S Domain of unknown function (DUF1963)
PHFJOIIO_01386 1.7e-18 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
PHFJOIIO_01387 5e-36 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
PHFJOIIO_01388 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
PHFJOIIO_01389 1.8e-83 S zinc-ribbon domain
PHFJOIIO_01390 2e-46 yhbY J CRS1_YhbY
PHFJOIIO_01391 0.0 4.2.1.53 S MCRA family
PHFJOIIO_01394 1.2e-202 K WYL domain
PHFJOIIO_01395 5e-156 yvgN 1.1.1.346 S Aldo/keto reductase family
PHFJOIIO_01396 5.8e-174 dkgA 1.1.1.346 C Aldo/keto reductase family
PHFJOIIO_01397 3.4e-76 yneG S Domain of unknown function (DUF4186)
PHFJOIIO_01399 4.6e-08 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
PHFJOIIO_01400 2.3e-181 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PHFJOIIO_01401 1.1e-256 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PHFJOIIO_01402 1.2e-224 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PHFJOIIO_01403 3.2e-112 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
PHFJOIIO_01404 6.1e-110
PHFJOIIO_01405 4.8e-122 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PHFJOIIO_01406 4.1e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
PHFJOIIO_01407 1.9e-283 S Uncharacterized protein conserved in bacteria (DUF2252)
PHFJOIIO_01408 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
PHFJOIIO_01409 2.2e-246 S Domain of unknown function (DUF5067)
PHFJOIIO_01410 2e-56 EGP Major facilitator Superfamily
PHFJOIIO_01411 5.3e-171 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PHFJOIIO_01412 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
PHFJOIIO_01413 1.4e-121 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
PHFJOIIO_01414 1.2e-169
PHFJOIIO_01415 1.7e-271 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PHFJOIIO_01416 4.6e-177 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
PHFJOIIO_01417 6e-166 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PHFJOIIO_01418 7.5e-129 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PHFJOIIO_01419 1.1e-49 M Lysin motif
PHFJOIIO_01420 1.1e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PHFJOIIO_01421 1.4e-228 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PHFJOIIO_01422 0.0 L DNA helicase
PHFJOIIO_01423 1.3e-90 mraZ K Belongs to the MraZ family
PHFJOIIO_01424 5.4e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PHFJOIIO_01425 2.3e-23 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PHFJOIIO_01426 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
PHFJOIIO_01427 3e-179 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PHFJOIIO_01428 1.4e-281 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PHFJOIIO_01429 3.6e-202 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PHFJOIIO_01430 6e-266 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PHFJOIIO_01431 6.9e-224 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
PHFJOIIO_01432 6.5e-218 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PHFJOIIO_01433 1.1e-292 murC 6.3.2.8 M Belongs to the MurCDEF family
PHFJOIIO_01434 4.9e-147 ftsQ 6.3.2.4 D Cell division protein FtsQ
PHFJOIIO_01435 1.3e-37
PHFJOIIO_01437 1e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PHFJOIIO_01438 1.3e-235 G Major Facilitator Superfamily
PHFJOIIO_01439 7.3e-169 2.7.1.4 G pfkB family carbohydrate kinase
PHFJOIIO_01440 1.5e-222 GK ROK family
PHFJOIIO_01441 2.9e-131 cutC P Participates in the control of copper homeostasis
PHFJOIIO_01442 1e-215 GK ROK family
PHFJOIIO_01443 3.6e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PHFJOIIO_01444 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
PHFJOIIO_01445 3.7e-304 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
PHFJOIIO_01446 6.7e-185 dppB EP Binding-protein-dependent transport system inner membrane component
PHFJOIIO_01447 5.6e-190 dppC EP Binding-protein-dependent transport system inner membrane component
PHFJOIIO_01448 0.0 P Belongs to the ABC transporter superfamily
PHFJOIIO_01449 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
PHFJOIIO_01450 4.3e-97 3.6.1.55 F NUDIX domain
PHFJOIIO_01452 1.1e-287 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
PHFJOIIO_01453 0.0 smc D Required for chromosome condensation and partitioning
PHFJOIIO_01454 7.4e-129 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
PHFJOIIO_01455 9.5e-244 yxbA 6.3.1.12 S ATP-grasp
PHFJOIIO_01456 4.2e-228 2.6.1.33 M DegT/DnrJ/EryC1/StrS aminotransferase family
PHFJOIIO_01457 9.8e-191 V Acetyltransferase (GNAT) domain
PHFJOIIO_01458 2.2e-296 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PHFJOIIO_01459 6.2e-114 sigH K Belongs to the sigma-70 factor family. ECF subfamily
PHFJOIIO_01460 2e-64
PHFJOIIO_01461 1.4e-194 galM 5.1.3.3 G Aldose 1-epimerase
PHFJOIIO_01462 1.3e-179 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PHFJOIIO_01463 8.4e-93 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PHFJOIIO_01464 1e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PHFJOIIO_01465 5.2e-133 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
PHFJOIIO_01466 1.4e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PHFJOIIO_01467 2.1e-25 rpmI J Ribosomal protein L35
PHFJOIIO_01468 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PHFJOIIO_01469 1.4e-178 xerD D recombinase XerD
PHFJOIIO_01470 1.8e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PHFJOIIO_01471 4.2e-150 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PHFJOIIO_01472 7.1e-113 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PHFJOIIO_01473 1.1e-149 nrtR 3.6.1.55 F NUDIX hydrolase
PHFJOIIO_01474 3.7e-251 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PHFJOIIO_01475 1.6e-310 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
PHFJOIIO_01476 2.4e-164 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
PHFJOIIO_01477 7.5e-236 iscS1 2.8.1.7 E Aminotransferase class-V
PHFJOIIO_01478 0.0 typA T Elongation factor G C-terminus
PHFJOIIO_01479 3.3e-84
PHFJOIIO_01480 4.2e-197 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
PHFJOIIO_01481 2.3e-190 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
PHFJOIIO_01482 7.3e-42
PHFJOIIO_01483 1.6e-185 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PHFJOIIO_01484 4.4e-175 appB EP Binding-protein-dependent transport system inner membrane component
PHFJOIIO_01485 1.3e-165 dppC EP N-terminal TM domain of oligopeptide transport permease C
PHFJOIIO_01486 0.0 oppD P Belongs to the ABC transporter superfamily
PHFJOIIO_01487 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PHFJOIIO_01488 5.2e-262 pepC 3.4.22.40 E Peptidase C1-like family
PHFJOIIO_01489 4.8e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
PHFJOIIO_01490 5.5e-139 S Protein of unknown function (DUF3710)
PHFJOIIO_01491 6.1e-124 S Protein of unknown function (DUF3159)
PHFJOIIO_01492 4.6e-246 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PHFJOIIO_01493 8.3e-108
PHFJOIIO_01494 0.0 ctpE P E1-E2 ATPase
PHFJOIIO_01495 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PHFJOIIO_01497 1.1e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PHFJOIIO_01498 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
PHFJOIIO_01499 1.1e-53 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PHFJOIIO_01500 8.5e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PHFJOIIO_01501 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PHFJOIIO_01502 3.2e-135 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PHFJOIIO_01503 5.6e-183 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PHFJOIIO_01504 1.7e-139 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
PHFJOIIO_01505 0.0 arc O AAA ATPase forming ring-shaped complexes
PHFJOIIO_01506 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
PHFJOIIO_01507 2e-157 hisN 3.1.3.25 G Inositol monophosphatase family
PHFJOIIO_01508 1.6e-10 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
PHFJOIIO_01509 2e-277 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PHFJOIIO_01510 8.1e-42 hup L Belongs to the bacterial histone-like protein family
PHFJOIIO_01511 0.0 S Lysylphosphatidylglycerol synthase TM region
PHFJOIIO_01512 3e-281 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
PHFJOIIO_01513 2.9e-290 S PGAP1-like protein
PHFJOIIO_01515 2.1e-74
PHFJOIIO_01516 1.6e-148 S von Willebrand factor (vWF) type A domain
PHFJOIIO_01517 6.8e-190 S von Willebrand factor (vWF) type A domain
PHFJOIIO_01518 6.4e-94
PHFJOIIO_01519 1.5e-175 S Protein of unknown function DUF58
PHFJOIIO_01520 1.5e-195 moxR S ATPase family associated with various cellular activities (AAA)
PHFJOIIO_01521 1.1e-144 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PHFJOIIO_01522 7.6e-71 S LytR cell envelope-related transcriptional attenuator
PHFJOIIO_01523 2.2e-44 cspA K 'Cold-shock' DNA-binding domain
PHFJOIIO_01524 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PHFJOIIO_01525 1.7e-10 S Proteins of 100 residues with WXG
PHFJOIIO_01526 6.2e-173
PHFJOIIO_01527 1.4e-133 KT Response regulator receiver domain protein
PHFJOIIO_01528 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PHFJOIIO_01529 5e-66 cspB K 'Cold-shock' DNA-binding domain
PHFJOIIO_01530 3.3e-192 S Protein of unknown function (DUF3027)
PHFJOIIO_01531 4e-184 uspA T Belongs to the universal stress protein A family
PHFJOIIO_01532 0.0 clpC O ATPase family associated with various cellular activities (AAA)
PHFJOIIO_01536 5.1e-217 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
PHFJOIIO_01537 7.1e-264 hisS 6.1.1.21 J Histidyl-tRNA synthetase
PHFJOIIO_01538 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PHFJOIIO_01539 1e-82 K helix_turn_helix, Lux Regulon
PHFJOIIO_01540 6.9e-86 S Aminoacyl-tRNA editing domain
PHFJOIIO_01541 3.9e-139 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
PHFJOIIO_01542 2.8e-146 gluB ET Belongs to the bacterial solute-binding protein 3 family
PHFJOIIO_01543 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
PHFJOIIO_01544 2e-197 gluD E Binding-protein-dependent transport system inner membrane component
PHFJOIIO_01545 6e-194 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
PHFJOIIO_01546 0.0 L DEAD DEAH box helicase
PHFJOIIO_01547 4.2e-256 rarA L Recombination factor protein RarA
PHFJOIIO_01549 5.2e-257 EGP Major facilitator Superfamily
PHFJOIIO_01550 0.0 ecfA GP ABC transporter, ATP-binding protein
PHFJOIIO_01551 1.3e-103 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PHFJOIIO_01552 1.7e-139 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
PHFJOIIO_01553 2.3e-212 E Aminotransferase class I and II
PHFJOIIO_01554 3.4e-138 bioM P ATPases associated with a variety of cellular activities
PHFJOIIO_01555 1.8e-36 2.8.2.22 S Arylsulfotransferase Ig-like domain
PHFJOIIO_01556 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PHFJOIIO_01557 0.0 S Tetratricopeptide repeat
PHFJOIIO_01558 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PHFJOIIO_01559 5.7e-211 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PHFJOIIO_01560 8.8e-161 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PHFJOIIO_01561 2e-86 int L Phage integrase, N-terminal SAM-like domain
PHFJOIIO_01562 4.8e-115 L DNA restriction-modification system
PHFJOIIO_01563 7.8e-33 3.1.21.4 L Recognizes the double-stranded sequence CTCGAG and cleaves after C-1
PHFJOIIO_01564 8.7e-79 S GIY-YIG catalytic domain
PHFJOIIO_01565 2.2e-221 ykiI
PHFJOIIO_01566 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PHFJOIIO_01567 1.2e-118 3.6.1.13 L NUDIX domain
PHFJOIIO_01568 1.4e-170 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
PHFJOIIO_01569 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PHFJOIIO_01570 9.2e-120 pdtaR T Response regulator receiver domain protein
PHFJOIIO_01572 1.8e-110 aspA 3.6.1.13 L NUDIX domain
PHFJOIIO_01573 6.6e-273 pyk 2.7.1.40 G Pyruvate kinase
PHFJOIIO_01574 1.3e-179 terC P Integral membrane protein, TerC family
PHFJOIIO_01575 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PHFJOIIO_01576 2.7e-106 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PHFJOIIO_01577 3.3e-243 rpsA J Ribosomal protein S1
PHFJOIIO_01578 1.8e-164 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PHFJOIIO_01579 7.4e-173 P Zinc-uptake complex component A periplasmic
PHFJOIIO_01580 1.8e-164 znuC P ATPases associated with a variety of cellular activities
PHFJOIIO_01581 4.3e-139 znuB U ABC 3 transport family
PHFJOIIO_01582 1.2e-82 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PHFJOIIO_01583 5.1e-102 carD K CarD-like/TRCF domain
PHFJOIIO_01584 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PHFJOIIO_01585 1.9e-127 T Response regulator receiver domain protein
PHFJOIIO_01586 4.3e-203 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PHFJOIIO_01587 8.1e-72 rulA 3.4.21.88 KT Peptidase S24-like
PHFJOIIO_01588 5.3e-130 ctsW S Phosphoribosyl transferase domain
PHFJOIIO_01589 6.5e-156 cof 5.2.1.8 T Eukaryotic phosphomannomutase
PHFJOIIO_01590 6.3e-66 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
PHFJOIIO_01591 4.5e-264
PHFJOIIO_01592 0.0 S Glycosyl transferase, family 2
PHFJOIIO_01593 5.8e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PHFJOIIO_01594 2.4e-270 K Cell envelope-related transcriptional attenuator domain
PHFJOIIO_01595 0.0 D FtsK/SpoIIIE family
PHFJOIIO_01596 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PHFJOIIO_01597 7.3e-286 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PHFJOIIO_01598 4.4e-142 yplQ S Haemolysin-III related
PHFJOIIO_01599 1.7e-105
PHFJOIIO_01601 7.5e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PHFJOIIO_01602 2.2e-72 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
PHFJOIIO_01603 8.8e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
PHFJOIIO_01604 1.8e-96
PHFJOIIO_01606 1.2e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PHFJOIIO_01607 2e-106 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
PHFJOIIO_01608 3.2e-101 divIC D Septum formation initiator
PHFJOIIO_01609 6.9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PHFJOIIO_01610 6.4e-153 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 E branched-chain-amino-acid transaminase activity
PHFJOIIO_01611 3.8e-279 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH chorismate binding enzyme
PHFJOIIO_01612 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PHFJOIIO_01613 7.6e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PHFJOIIO_01614 2.7e-97 2.3.1.183 M Acetyltransferase (GNAT) domain
PHFJOIIO_01615 4.9e-145 tagH 3.6.3.38, 3.6.3.40 GM ABC transporter
PHFJOIIO_01616 3.6e-151 GM ABC-2 type transporter
PHFJOIIO_01617 2.1e-196 GM GDP-mannose 4,6 dehydratase
PHFJOIIO_01618 1.8e-130 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PHFJOIIO_01621 7e-220 I transferase activity, transferring acyl groups other than amino-acyl groups
PHFJOIIO_01622 0.0 2.7.8.14, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PHFJOIIO_01623 5.3e-206 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PHFJOIIO_01624 0.0 S Uncharacterised protein family (UPF0182)
PHFJOIIO_01625 2.3e-232 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
PHFJOIIO_01626 3.8e-196
PHFJOIIO_01627 2.6e-149 ytrE V ATPases associated with a variety of cellular activities
PHFJOIIO_01628 8.3e-191 V N-Acetylmuramoyl-L-alanine amidase
PHFJOIIO_01629 1.7e-257 argE E Peptidase dimerisation domain
PHFJOIIO_01630 2.7e-103 S Protein of unknown function (DUF3043)
PHFJOIIO_01631 5.2e-281 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PHFJOIIO_01632 3.6e-143 S Domain of unknown function (DUF4191)
PHFJOIIO_01633 1.8e-286 glnA 6.3.1.2 E glutamine synthetase
PHFJOIIO_01634 4.7e-10
PHFJOIIO_01636 5.5e-33 traSA D DNA segregation ATPase FtsK SpoIIIE
PHFJOIIO_01641 1.3e-78
PHFJOIIO_01642 1.2e-64 D MobA/MobL family
PHFJOIIO_01643 8.6e-48 L Transposase
PHFJOIIO_01644 1.7e-181 tnp7109-21 L Integrase core domain
PHFJOIIO_01645 1.1e-26 2.1.1.72 S Adenine-specific methyltransferase EcoRI
PHFJOIIO_01646 9e-40
PHFJOIIO_01647 3.6e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
PHFJOIIO_01649 8.3e-108 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PHFJOIIO_01650 8.1e-47 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PHFJOIIO_01652 4.1e-240 pbuX F Permease family
PHFJOIIO_01653 1.9e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PHFJOIIO_01654 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
PHFJOIIO_01655 0.0 pcrA 3.6.4.12 L DNA helicase
PHFJOIIO_01656 8.2e-64 S Domain of unknown function (DUF4418)
PHFJOIIO_01657 1.4e-210 V FtsX-like permease family
PHFJOIIO_01658 1.9e-128 lolD V ABC transporter
PHFJOIIO_01659 1e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PHFJOIIO_01660 0.0 oatA I Psort location CytoplasmicMembrane, score 9.99
PHFJOIIO_01661 6.5e-136 pgm3 G Phosphoglycerate mutase family
PHFJOIIO_01662 3.8e-64 WQ51_05790 S Bacterial protein of unknown function (DUF948)
PHFJOIIO_01663 1.1e-36
PHFJOIIO_01664 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PHFJOIIO_01665 3e-75 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PHFJOIIO_01666 7.1e-188 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PHFJOIIO_01667 1.3e-47 3.4.23.43 S Type IV leader peptidase family
PHFJOIIO_01668 4.6e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PHFJOIIO_01669 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PHFJOIIO_01670 1.9e-77 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
PHFJOIIO_01671 3.4e-15
PHFJOIIO_01672 1.7e-120 K helix_turn_helix, Lux Regulon
PHFJOIIO_01673 2.6e-07 3.4.22.70 M Sortase family
PHFJOIIO_01674 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PHFJOIIO_01675 4.8e-290 sufB O FeS assembly protein SufB
PHFJOIIO_01676 2.8e-232 sufD O FeS assembly protein SufD
PHFJOIIO_01677 1.4e-144 sufC O FeS assembly ATPase SufC
PHFJOIIO_01678 1.6e-241 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PHFJOIIO_01679 1.5e-100 iscU C SUF system FeS assembly protein, NifU family
PHFJOIIO_01680 1.2e-108 yitW S Iron-sulfur cluster assembly protein
PHFJOIIO_01681 4.7e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PHFJOIIO_01682 4e-164 spoU 2.1.1.185 J SpoU rRNA Methylase family
PHFJOIIO_01684 2.1e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PHFJOIIO_01685 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
PHFJOIIO_01686 2e-197 phoH T PhoH-like protein
PHFJOIIO_01687 7.4e-100 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PHFJOIIO_01688 2.4e-251 corC S CBS domain
PHFJOIIO_01689 5.1e-187 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PHFJOIIO_01690 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PHFJOIIO_01691 1.1e-201 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
PHFJOIIO_01692 4.4e-44 pntA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
PHFJOIIO_01693 6.7e-233 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PHFJOIIO_01694 3.1e-189 S alpha beta
PHFJOIIO_01695 8.3e-95 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PHFJOIIO_01696 1.8e-225 ilvE 2.6.1.42 E Amino-transferase class IV
PHFJOIIO_01697 4e-46 S phosphoesterase or phosphohydrolase
PHFJOIIO_01698 2.1e-142 3.1.4.37 T RNA ligase
PHFJOIIO_01699 4.4e-135 S UPF0126 domain
PHFJOIIO_01700 9.9e-34 rpsT J Binds directly to 16S ribosomal RNA
PHFJOIIO_01701 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PHFJOIIO_01702 1.1e-245 hemN H Involved in the biosynthesis of porphyrin-containing compound
PHFJOIIO_01703 4.5e-291 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
PHFJOIIO_01704 0.0 tetP J Elongation factor G, domain IV
PHFJOIIO_01705 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
PHFJOIIO_01706 2.7e-304 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PHFJOIIO_01707 3.6e-82
PHFJOIIO_01708 1.1e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
PHFJOIIO_01709 8.9e-164 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
PHFJOIIO_01710 6.5e-157 ybeM S Carbon-nitrogen hydrolase
PHFJOIIO_01711 1e-110 S Sel1-like repeats.
PHFJOIIO_01712 2.6e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PHFJOIIO_01713 1.7e-61 S Short C-terminal domain
PHFJOIIO_01714 7.5e-140 L Transposase
PHFJOIIO_01715 1.6e-28
PHFJOIIO_01716 5.6e-42 tnp7109-21 L Integrase core domain
PHFJOIIO_01717 2e-66 L IstB-like ATP binding protein
PHFJOIIO_01718 1e-74 V ATPases associated with a variety of cellular activities
PHFJOIIO_01719 4.4e-73 I Sterol carrier protein
PHFJOIIO_01720 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PHFJOIIO_01722 3.4e-35
PHFJOIIO_01723 3.2e-144 gluP 3.4.21.105 S Rhomboid family
PHFJOIIO_01724 1.6e-257 L ribosomal rna small subunit methyltransferase
PHFJOIIO_01725 6.9e-67 crgA D Involved in cell division
PHFJOIIO_01726 7.9e-143 S Bacterial protein of unknown function (DUF881)
PHFJOIIO_01727 2.6e-233 srtA 3.4.22.70 M Sortase family
PHFJOIIO_01728 3.4e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
PHFJOIIO_01729 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
PHFJOIIO_01730 2e-183 T Protein tyrosine kinase
PHFJOIIO_01731 3.7e-263 pbpA M penicillin-binding protein
PHFJOIIO_01732 2.8e-266 rodA D Belongs to the SEDS family
PHFJOIIO_01733 9.7e-260 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
PHFJOIIO_01734 7.9e-94 fhaB T Inner membrane component of T3SS, cytoplasmic domain
PHFJOIIO_01735 1e-130 fhaA T Protein of unknown function (DUF2662)
PHFJOIIO_01736 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
PHFJOIIO_01737 0.0 pip S YhgE Pip domain protein
PHFJOIIO_01738 0.0 pip S YhgE Pip domain protein
PHFJOIIO_01739 6.7e-206 pldB 3.1.1.5 I Serine aminopeptidase, S33
PHFJOIIO_01740 1.5e-159 yicL EG EamA-like transporter family
PHFJOIIO_01741 4.8e-97
PHFJOIIO_01743 3.5e-196 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PHFJOIIO_01745 0.0 KL Domain of unknown function (DUF3427)
PHFJOIIO_01746 2.7e-91 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PHFJOIIO_01747 7.5e-41 D DivIVA domain protein
PHFJOIIO_01748 1.7e-51 ybjQ S Putative heavy-metal-binding
PHFJOIIO_01749 1.3e-156 I Serine aminopeptidase, S33
PHFJOIIO_01750 7e-86 yjcF Q Acetyltransferase (GNAT) domain
PHFJOIIO_01752 1.2e-257 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PHFJOIIO_01753 1.5e-240 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
PHFJOIIO_01754 0.0 cadA P E1-E2 ATPase
PHFJOIIO_01755 1.6e-271 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
PHFJOIIO_01756 9.6e-172 htpX O Belongs to the peptidase M48B family
PHFJOIIO_01758 3.6e-128 E IrrE N-terminal-like domain
PHFJOIIO_01759 2.3e-72 S Domain of unknown function (DUF4411)
PHFJOIIO_01760 4.7e-52 int8 L Phage integrase family
PHFJOIIO_01761 3e-209 L Transposase and inactivated derivatives IS30 family
PHFJOIIO_01762 3.4e-145 M Glycosyl hydrolases family 25
PHFJOIIO_01763 6.8e-24
PHFJOIIO_01764 2.2e-114 ecoRIR 3.1.21.4 L Restriction endonuclease EcoRI
PHFJOIIO_01765 1e-133 2.1.1.113, 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
PHFJOIIO_01769 5.9e-187 KLT Protein tyrosine kinase
PHFJOIIO_01770 1.1e-34 L Phage integrase family
PHFJOIIO_01771 8.7e-25 L Phage integrase family
PHFJOIIO_01772 1e-47 L Phage integrase family
PHFJOIIO_01773 2.4e-107 3.4.13.21 E Peptidase family S51
PHFJOIIO_01774 4.8e-274 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PHFJOIIO_01775 9.8e-233 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PHFJOIIO_01776 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PHFJOIIO_01777 1e-281 XK27_07020 S Domain of unknown function (DUF1846)
PHFJOIIO_01778 1.4e-121
PHFJOIIO_01779 1.4e-110 ysdA S Protein of unknown function (DUF1294)
PHFJOIIO_01780 4.8e-10
PHFJOIIO_01783 1.1e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PHFJOIIO_01784 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PHFJOIIO_01785 9.8e-189 pit P Phosphate transporter family
PHFJOIIO_01786 1.1e-115 MA20_27875 P Protein of unknown function DUF47
PHFJOIIO_01787 3.1e-119 K helix_turn_helix, Lux Regulon
PHFJOIIO_01788 6.4e-235 T Histidine kinase
PHFJOIIO_01789 3.4e-42 pacL 3.6.3.8, 3.6.3.9 P ATPase, P-type transporting, HAD superfamily, subfamily IC
PHFJOIIO_01790 5.3e-181 V ATPases associated with a variety of cellular activities
PHFJOIIO_01791 3.2e-223 V ABC-2 family transporter protein
PHFJOIIO_01792 9e-254 V ABC-2 family transporter protein
PHFJOIIO_01793 1.7e-284 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PHFJOIIO_01794 8.3e-41
PHFJOIIO_01795 6.9e-128
PHFJOIIO_01796 1.1e-07 S Phage minor structural protein
PHFJOIIO_01797 7.5e-240 S Phage minor structural protein
PHFJOIIO_01798 3.1e-197 S phage tail tape measure protein
PHFJOIIO_01799 5.8e-24
PHFJOIIO_01800 1.6e-13
PHFJOIIO_01801 4.2e-49 S Phage protein Gp19/Gp15/Gp42
PHFJOIIO_01802 6.6e-120 S Phage capsid family
PHFJOIIO_01803 1.1e-20
PHFJOIIO_01804 7.3e-22
PHFJOIIO_01805 1.6e-26
PHFJOIIO_01806 3e-191 S Phage portal protein, SPP1 Gp6-like
PHFJOIIO_01807 6.5e-215 S Terminase
PHFJOIIO_01808 5.6e-52 V Restriction endonuclease
PHFJOIIO_01810 1.9e-11

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)