ORF_ID e_value Gene_name EC_number CAZy COGs Description
LPJOGGEA_00001 2.8e-132 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
LPJOGGEA_00002 3.8e-57 S ParE toxin of type II toxin-antitoxin system, parDE
LPJOGGEA_00003 3.4e-43
LPJOGGEA_00004 2.6e-95
LPJOGGEA_00005 3.3e-66 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LPJOGGEA_00007 3.4e-52 K TfoX N-terminal domain
LPJOGGEA_00008 2.6e-127 S CAAX amino terminal protease family protein
LPJOGGEA_00009 1.1e-104 L DNA alkylation repair enzyme
LPJOGGEA_00010 3.8e-154 aph 2.7.11.1 KLT Aminoglycoside phosphotransferase
LPJOGGEA_00011 1.8e-51 K Transcriptional regulator
LPJOGGEA_00012 2.4e-28 S Protein of unknown function (DUF1648)
LPJOGGEA_00013 1.4e-252 6.1.1.6 S Psort location CytoplasmicMembrane, score
LPJOGGEA_00014 2.6e-129 ecsA V AAA domain, putative AbiEii toxin, Type IV TA system
LPJOGGEA_00015 5.4e-107 K Transcriptional regulator
LPJOGGEA_00016 1.1e-90 L Molecular Function DNA binding, Biological Process DNA recombination
LPJOGGEA_00017 6.2e-45 L transposase activity
LPJOGGEA_00018 2.5e-91 Q Nodulation protein S (NodS)
LPJOGGEA_00019 5.7e-250 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LPJOGGEA_00020 2e-97 mip S hydroperoxide reductase activity
LPJOGGEA_00021 2e-202 I acyl-CoA dehydrogenase
LPJOGGEA_00022 3.4e-153 ydiA P C4-dicarboxylate transporter malic acid transport
LPJOGGEA_00023 2.2e-244 msrR K Transcriptional regulator
LPJOGGEA_00024 1.4e-153 pheA 4.2.1.51 E Prephenate dehydratase
LPJOGGEA_00025 6.7e-76 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LPJOGGEA_00026 7.5e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LPJOGGEA_00027 7e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
LPJOGGEA_00028 4.2e-53 yheA S Belongs to the UPF0342 family
LPJOGGEA_00029 1.1e-206 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
LPJOGGEA_00030 9.9e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LPJOGGEA_00031 5.9e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LPJOGGEA_00032 1.4e-158 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LPJOGGEA_00033 4.4e-118 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
LPJOGGEA_00034 2.1e-216 ywbD 2.1.1.191 J Methyltransferase
LPJOGGEA_00035 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
LPJOGGEA_00036 1.2e-25 WQ51_00785
LPJOGGEA_00037 7.4e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LPJOGGEA_00038 4.3e-77 yueI S Protein of unknown function (DUF1694)
LPJOGGEA_00039 1.4e-198 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LPJOGGEA_00040 5.1e-188 yyaQ S YjbR
LPJOGGEA_00041 1.9e-181 ccpA K Catabolite control protein A
LPJOGGEA_00042 6e-210 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
LPJOGGEA_00043 4.2e-62 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
LPJOGGEA_00044 1.6e-268 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LPJOGGEA_00045 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LPJOGGEA_00046 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LPJOGGEA_00047 2e-33 secG U Preprotein translocase subunit SecG
LPJOGGEA_00048 5e-221 mdtG EGP Major facilitator Superfamily
LPJOGGEA_00049 4.2e-96 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LPJOGGEA_00050 1.5e-149 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LPJOGGEA_00051 2.2e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LPJOGGEA_00052 1.3e-64 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
LPJOGGEA_00053 4.6e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LPJOGGEA_00054 4.1e-150 licT K antiterminator
LPJOGGEA_00055 1.3e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LPJOGGEA_00056 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
LPJOGGEA_00057 5.6e-147 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LPJOGGEA_00058 1.1e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LPJOGGEA_00059 2.9e-150 I Alpha/beta hydrolase family
LPJOGGEA_00060 6.6e-08
LPJOGGEA_00061 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
LPJOGGEA_00062 1.4e-78 feoA P FeoA domain protein
LPJOGGEA_00063 1.3e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
LPJOGGEA_00064 5.8e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
LPJOGGEA_00065 1e-34 ykuJ S protein conserved in bacteria
LPJOGGEA_00066 3.7e-182 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LPJOGGEA_00067 0.0 clpE O Belongs to the ClpA ClpB family
LPJOGGEA_00068 7.4e-85 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
LPJOGGEA_00069 6.2e-48 XK27_09445 S Domain of unknown function (DUF1827)
LPJOGGEA_00070 1e-176 S oxidoreductase
LPJOGGEA_00071 4.4e-118 M Pfam SNARE associated Golgi protein
LPJOGGEA_00072 1.9e-107 S Domain of Unknown Function with PDB structure (DUF3862)
LPJOGGEA_00075 2.5e-204 rpsA 1.17.7.4 J ribosomal protein S1
LPJOGGEA_00078 4.8e-16 S Protein of unknown function (DUF2969)
LPJOGGEA_00079 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
LPJOGGEA_00080 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LPJOGGEA_00081 5.3e-10
LPJOGGEA_00083 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LPJOGGEA_00084 7.4e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LPJOGGEA_00085 3.7e-13 L Helix-hairpin-helix DNA-binding motif class 1
LPJOGGEA_00086 2.2e-30 S Domain of unknown function (DUF1912)
LPJOGGEA_00087 6.3e-171 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
LPJOGGEA_00088 5.2e-251 mmuP E amino acid
LPJOGGEA_00089 3.3e-109 engB D Necessary for normal cell division and for the maintenance of normal septation
LPJOGGEA_00090 2.6e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LPJOGGEA_00091 9.7e-22
LPJOGGEA_00092 1.9e-89 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LPJOGGEA_00093 1.2e-165 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LPJOGGEA_00094 4.9e-210 mvaS 2.3.3.10 I synthase
LPJOGGEA_00095 1.9e-223 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
LPJOGGEA_00096 3e-78 K hmm pf08876
LPJOGGEA_00097 1.3e-117 yqfA K protein, Hemolysin III
LPJOGGEA_00098 4.1e-29 pspC KT PspC domain protein
LPJOGGEA_00099 4.5e-194 S Protein of unknown function (DUF3114)
LPJOGGEA_00100 3.9e-133 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
LPJOGGEA_00101 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LPJOGGEA_00102 2.6e-247 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
LPJOGGEA_00103 2.6e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
LPJOGGEA_00104 0.0 U protein secretion
LPJOGGEA_00105 3.8e-117 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LPJOGGEA_00106 3.2e-24
LPJOGGEA_00107 1.3e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
LPJOGGEA_00108 2.9e-257 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LPJOGGEA_00109 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LPJOGGEA_00110 2.5e-186 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LPJOGGEA_00111 2.6e-175 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
LPJOGGEA_00112 1.6e-171 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
LPJOGGEA_00113 7.1e-153 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
LPJOGGEA_00114 2.7e-97 GBS0088 J protein conserved in bacteria
LPJOGGEA_00115 3e-92
LPJOGGEA_00116 2e-84 cbiO V ABC transporter
LPJOGGEA_00117 2.7e-83 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
LPJOGGEA_00118 4.8e-246 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LPJOGGEA_00119 2.1e-121 E Alpha beta hydrolase
LPJOGGEA_00122 1e-196 ald 1.4.1.1 C Belongs to the AlaDH PNT family
LPJOGGEA_00123 3.6e-213 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
LPJOGGEA_00124 6.5e-128 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LPJOGGEA_00125 9.6e-113 S VIT family
LPJOGGEA_00126 2.2e-134 deoD_1 2.4.2.3 F Phosphorylase superfamily
LPJOGGEA_00127 1.2e-21
LPJOGGEA_00128 2.7e-28 XK27_00085 K Transcriptional
LPJOGGEA_00129 5.3e-197 yceA S Belongs to the UPF0176 family
LPJOGGEA_00130 5.1e-41 S Protein conserved in bacteria
LPJOGGEA_00131 8.3e-120 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LPJOGGEA_00132 1.5e-197 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LPJOGGEA_00133 0.0 lmrA V abc transporter atp-binding protein
LPJOGGEA_00134 0.0 mdlB V abc transporter atp-binding protein
LPJOGGEA_00135 7.4e-61 rlrB K LysR substrate binding domain protein
LPJOGGEA_00136 1.9e-273 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
LPJOGGEA_00137 6.4e-91 abiGI K Transcriptional regulator, AbiEi antitoxin
LPJOGGEA_00138 7.6e-104 XK27_00530 M CHAP domain protein
LPJOGGEA_00140 2.6e-190 L DNA integration
LPJOGGEA_00141 1.2e-14 S Domain of unknown function (DUF3173)
LPJOGGEA_00142 1.7e-83 S Plasmid replication protein
LPJOGGEA_00143 3.7e-47
LPJOGGEA_00144 2.1e-178 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
LPJOGGEA_00145 3.7e-43
LPJOGGEA_00146 1.2e-30
LPJOGGEA_00148 0.0 2.1.1.72 LV TaqI-like C-terminal specificity domain
LPJOGGEA_00149 2.1e-45 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LPJOGGEA_00150 1.9e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LPJOGGEA_00151 3e-210 V permease protein
LPJOGGEA_00152 9.9e-121 macB V ABC transporter, ATP-binding protein
LPJOGGEA_00153 9.4e-183 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LPJOGGEA_00154 5.8e-127 2.1.1.223 S Putative SAM-dependent methyltransferase
LPJOGGEA_00155 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
LPJOGGEA_00156 9.3e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
LPJOGGEA_00157 1.3e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LPJOGGEA_00158 1.6e-222 pyrP F uracil Permease
LPJOGGEA_00159 4.8e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LPJOGGEA_00160 7.2e-161 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LPJOGGEA_00161 5.7e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LPJOGGEA_00162 2.6e-166 fhuR K transcriptional regulator (lysR family)
LPJOGGEA_00164 2.3e-43
LPJOGGEA_00165 5.8e-69 K Helix-turn-helix
LPJOGGEA_00167 1.5e-138 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LPJOGGEA_00168 0.0 pts33BCA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
LPJOGGEA_00169 6e-08 uvrX 2.7.7.7 L impB/mucB/samB family
LPJOGGEA_00170 6.7e-254 cycA E permease
LPJOGGEA_00171 3.5e-39 ynzC S UPF0291 protein
LPJOGGEA_00172 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
LPJOGGEA_00173 6.9e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
LPJOGGEA_00174 4.3e-220 S membrane
LPJOGGEA_00175 4e-212 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LPJOGGEA_00176 3.8e-293 nptA P COG1283 Na phosphate symporter
LPJOGGEA_00177 4.7e-114 3.4.17.14, 3.5.1.28 NU amidase activity
LPJOGGEA_00178 1.2e-81 S Bacterial inner membrane protein
LPJOGGEA_00179 5.1e-145 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
LPJOGGEA_00180 1.2e-104 mur1 3.4.17.14, 3.5.1.28 NU amidase activity
LPJOGGEA_00181 1.9e-53 glnB K Belongs to the P(II) protein family
LPJOGGEA_00182 1.2e-183 amt P Ammonium Transporter
LPJOGGEA_00183 3.1e-34 amt P Ammonium Transporter
LPJOGGEA_00184 3.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LPJOGGEA_00185 1.2e-54 yabA L Involved in initiation control of chromosome replication
LPJOGGEA_00186 3.7e-132 yaaT S stage 0 sporulation protein
LPJOGGEA_00187 7.3e-158 holB 2.7.7.7 L dna polymerase iii
LPJOGGEA_00188 1.3e-108 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LPJOGGEA_00190 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LPJOGGEA_00191 2.6e-135 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LPJOGGEA_00192 1.6e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LPJOGGEA_00193 1.5e-215 ftsW D Belongs to the SEDS family
LPJOGGEA_00194 2.6e-68 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LPJOGGEA_00195 7.9e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LPJOGGEA_00196 1.1e-156 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LPJOGGEA_00197 2.2e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LPJOGGEA_00198 1.3e-85 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LPJOGGEA_00199 9.5e-78 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LPJOGGEA_00200 1.4e-114 atpB C it plays a direct role in the translocation of protons across the membrane
LPJOGGEA_00201 2.4e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LPJOGGEA_00202 5e-186 femA 2.3.2.10, 2.3.2.16 V FemAB family
LPJOGGEA_00204 1e-57 arsC 1.20.4.1 P Belongs to the ArsC family
LPJOGGEA_00205 2.7e-72 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
LPJOGGEA_00206 7.4e-222 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LPJOGGEA_00207 3e-104 wecD M Acetyltransferase (GNAT) domain
LPJOGGEA_00208 3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LPJOGGEA_00209 5.5e-161 GK ROK family
LPJOGGEA_00210 1.8e-71 gloA 4.4.1.5 E Lactoylglutathione lyase
LPJOGGEA_00211 1.9e-145 XK27_08050 O HflC and HflK could regulate a protease
LPJOGGEA_00212 7.5e-205 potD P spermidine putrescine ABC transporter
LPJOGGEA_00213 2.3e-131 potC P ABC-type spermidine putrescine transport system, permease component II
LPJOGGEA_00214 4.1e-139 potB P ABC-type spermidine putrescine transport system, permease component I
LPJOGGEA_00215 5.2e-212 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LPJOGGEA_00216 9.5e-169 murB 1.3.1.98 M cell wall formation
LPJOGGEA_00217 4.1e-81 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LPJOGGEA_00218 4.5e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LPJOGGEA_00219 3.5e-290 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
LPJOGGEA_00220 1.7e-145 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LPJOGGEA_00221 7.7e-100 folE 3.5.4.16 F gtp cyclohydrolase
LPJOGGEA_00222 0.0 ydaO E amino acid
LPJOGGEA_00223 1.6e-238 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LPJOGGEA_00224 2.4e-37 ylqC L Belongs to the UPF0109 family
LPJOGGEA_00225 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LPJOGGEA_00227 7.8e-198 2.7.13.3 T GHKL domain
LPJOGGEA_00228 2.7e-129 agrA KT phosphorelay signal transduction system
LPJOGGEA_00229 5.1e-184 O protein import
LPJOGGEA_00230 3.9e-167 tehB 2.1.1.265 PQ tellurite resistance protein tehb
LPJOGGEA_00231 2.9e-17 yjdB S Domain of unknown function (DUF4767)
LPJOGGEA_00232 3e-198 XK27_00915 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LPJOGGEA_00234 1.5e-157 xth 3.1.11.2 L exodeoxyribonuclease III
LPJOGGEA_00235 5.8e-72 S QueT transporter
LPJOGGEA_00237 6.5e-171 yfjR K regulation of single-species biofilm formation
LPJOGGEA_00238 2.1e-185 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
LPJOGGEA_00239 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LPJOGGEA_00240 1.7e-85 ccl S cog cog4708
LPJOGGEA_00241 6.2e-163 rbn E Belongs to the UPF0761 family
LPJOGGEA_00242 4.2e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
LPJOGGEA_00243 1.7e-227 ytoI K transcriptional regulator containing CBS domains
LPJOGGEA_00244 1.5e-97 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
LPJOGGEA_00245 2.6e-233 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LPJOGGEA_00246 0.0 comEC S Competence protein ComEC
LPJOGGEA_00247 1.1e-92 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
LPJOGGEA_00248 1.9e-141 plsC 2.3.1.51 I Acyltransferase
LPJOGGEA_00249 4.6e-153 nodB3 G deacetylase
LPJOGGEA_00250 6e-140 yabB 2.1.1.223 L Methyltransferase
LPJOGGEA_00251 3.3e-40 yazA L endonuclease containing a URI domain
LPJOGGEA_00252 2.2e-245 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LPJOGGEA_00253 7.4e-153 corA P CorA-like protein
LPJOGGEA_00254 2.5e-62 yjqA S Bacterial PH domain
LPJOGGEA_00255 4.3e-98 thiT S Thiamine transporter
LPJOGGEA_00256 1.3e-151 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
LPJOGGEA_00257 5.2e-191 yjbB G Permeases of the major facilitator superfamily
LPJOGGEA_00258 2.3e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LPJOGGEA_00259 4e-116 ywaF S Integral membrane protein (intg_mem_TP0381)
LPJOGGEA_00260 2.5e-253 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LPJOGGEA_00263 3.3e-155 cjaA ET ABC transporter substrate-binding protein
LPJOGGEA_00264 5.2e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
LPJOGGEA_00265 1.3e-106 P ABC transporter (Permease
LPJOGGEA_00266 2.5e-113 papP P ABC transporter (Permease
LPJOGGEA_00267 4.9e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LPJOGGEA_00268 2.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
LPJOGGEA_00269 0.0 copA 3.6.3.54 P P-type ATPase
LPJOGGEA_00270 4.4e-71 copY K negative regulation of transcription, DNA-templated
LPJOGGEA_00271 1.7e-162 EGP Major facilitator Superfamily
LPJOGGEA_00272 1.3e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LPJOGGEA_00273 7.6e-230 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LPJOGGEA_00274 2.3e-99 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
LPJOGGEA_00275 1.8e-131 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
LPJOGGEA_00276 3.3e-178 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LPJOGGEA_00277 2.7e-105 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
LPJOGGEA_00278 3.1e-256 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LPJOGGEA_00279 1.5e-40 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
LPJOGGEA_00280 3.5e-120 yujD V ABC transporter
LPJOGGEA_00281 0.0 S bacteriocin-associated integral membrane protein
LPJOGGEA_00282 5.5e-19 S Bacteriocin (Lactococcin_972)
LPJOGGEA_00283 2.9e-58
LPJOGGEA_00284 0.0 ctpE P E1-E2 ATPase
LPJOGGEA_00285 2.4e-44
LPJOGGEA_00286 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LPJOGGEA_00288 3.9e-125 V abc transporter atp-binding protein
LPJOGGEA_00289 0.0 V ABC transporter (Permease
LPJOGGEA_00290 2.9e-131 K transcriptional regulator, MerR family
LPJOGGEA_00291 9.8e-106 dnaQ 2.7.7.7 L DNA polymerase III
LPJOGGEA_00292 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
LPJOGGEA_00293 6.3e-63 XK27_02560 S cog cog2151
LPJOGGEA_00294 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
LPJOGGEA_00295 1e-223 ytfP S Flavoprotein
LPJOGGEA_00297 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LPJOGGEA_00298 7.1e-152 ytmP 2.7.1.89 M Phosphotransferase
LPJOGGEA_00299 3.9e-174 ecsB U Bacterial ABC transporter protein EcsB
LPJOGGEA_00300 1.3e-131 ecsA V abc transporter atp-binding protein
LPJOGGEA_00301 2.5e-71 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
LPJOGGEA_00302 4.1e-07
LPJOGGEA_00305 1.6e-103
LPJOGGEA_00307 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
LPJOGGEA_00308 1.8e-43 yoeB S Addiction module toxin, Txe YoeB family
LPJOGGEA_00309 3.4e-39 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
LPJOGGEA_00310 7.7e-197 ylbM S Belongs to the UPF0348 family
LPJOGGEA_00311 5.5e-138 yqeM Q Methyltransferase domain protein
LPJOGGEA_00312 7.7e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LPJOGGEA_00313 2.5e-86 entB 3.5.1.19 Q Isochorismatase family
LPJOGGEA_00314 6.4e-105 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
LPJOGGEA_00315 1.3e-116 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LPJOGGEA_00316 7.7e-49 yhbY J RNA-binding protein
LPJOGGEA_00317 5.4e-214 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
LPJOGGEA_00318 7.4e-97 yqeG S hydrolase of the HAD superfamily
LPJOGGEA_00319 1.6e-142 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
LPJOGGEA_00320 1.1e-62
LPJOGGEA_00321 7e-216 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LPJOGGEA_00322 7.7e-59
LPJOGGEA_00323 1e-40 celC 2.7.1.196, 2.7.1.205 G Phosphotransferase system cellobiose-specific component IIA
LPJOGGEA_00324 3.9e-276 celR 2.7.1.194, 2.7.1.202, 2.7.1.204 GKT Mga helix-turn-helix domain
LPJOGGEA_00325 4.2e-47 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIB subunit
LPJOGGEA_00326 7.2e-31 S PQ loop repeat
LPJOGGEA_00327 2.7e-282 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LPJOGGEA_00329 2.3e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LPJOGGEA_00330 1.7e-268 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LPJOGGEA_00331 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LPJOGGEA_00332 4.8e-42 tagE 2.4.1.52 GT4 M transferase activity, transferring glycosyl groups
LPJOGGEA_00333 1.3e-292 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LPJOGGEA_00334 2.2e-99 pncA Q isochorismatase
LPJOGGEA_00335 2.4e-139 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
LPJOGGEA_00336 1.5e-238 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
LPJOGGEA_00337 9e-75 XK27_03180 T universal stress protein
LPJOGGEA_00339 3.9e-158 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LPJOGGEA_00340 5.2e-08 MU outer membrane autotransporter barrel domain protein
LPJOGGEA_00341 3.8e-238 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
LPJOGGEA_00342 2.1e-143 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
LPJOGGEA_00343 0.0 yjcE P NhaP-type Na H and K H antiporters
LPJOGGEA_00345 1e-96 ytqB 2.1.1.176 J (SAM)-dependent
LPJOGGEA_00346 3.2e-183 yhcC S radical SAM protein
LPJOGGEA_00347 6.6e-185 ylbL T Belongs to the peptidase S16 family
LPJOGGEA_00348 1e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LPJOGGEA_00349 1.5e-92 rsmD 2.1.1.171 L Methyltransferase
LPJOGGEA_00350 8e-171 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LPJOGGEA_00351 5e-10 S Protein of unknown function (DUF4059)
LPJOGGEA_00352 4.2e-130 tcyN 3.6.3.21 E abc transporter atp-binding protein
LPJOGGEA_00353 8e-163 yxeN P ABC transporter (Permease
LPJOGGEA_00354 1.7e-151 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
LPJOGGEA_00355 2.3e-34
LPJOGGEA_00356 1.9e-203 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LPJOGGEA_00357 0.0 pflB 2.3.1.54 C formate acetyltransferase'
LPJOGGEA_00359 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
LPJOGGEA_00360 1.2e-143 cah 4.2.1.1 P carbonic anhydrase
LPJOGGEA_00361 4.9e-73 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LPJOGGEA_00363 1.3e-171 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
LPJOGGEA_00364 3.2e-141 cppA E CppA N-terminal
LPJOGGEA_00365 2.7e-99 V CAAX protease self-immunity
LPJOGGEA_00366 1.2e-163 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
LPJOGGEA_00367 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LPJOGGEA_00377 0.0 mdlB V abc transporter atp-binding protein
LPJOGGEA_00378 0.0 mdlA V abc transporter atp-binding protein
LPJOGGEA_00380 6.1e-91 XK27_09885 V Glycopeptide antibiotics resistance protein
LPJOGGEA_00381 1.8e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
LPJOGGEA_00382 5.6e-63 yutD J protein conserved in bacteria
LPJOGGEA_00383 3.7e-257 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
LPJOGGEA_00385 3.6e-220 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LPJOGGEA_00386 1.1e-184 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LPJOGGEA_00387 0.0 ftsI 3.4.16.4 M penicillin-binding protein
LPJOGGEA_00388 4e-45 ftsL D cell division protein FtsL
LPJOGGEA_00389 6.7e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LPJOGGEA_00390 2.2e-100
LPJOGGEA_00392 1.2e-43 yhaI J Protein of unknown function (DUF805)
LPJOGGEA_00393 1.4e-55 yhaI J Protein of unknown function (DUF805)
LPJOGGEA_00394 2.9e-86 L Endonuclease
LPJOGGEA_00395 2e-28 yhaI J Protein of unknown function (DUF805)
LPJOGGEA_00396 2.1e-222 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LPJOGGEA_00397 2.2e-140 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LPJOGGEA_00398 8.3e-285 XK27_00765
LPJOGGEA_00399 8.1e-134 ecsA_2 V abc transporter atp-binding protein
LPJOGGEA_00400 8.9e-125 S Protein of unknown function (DUF554)
LPJOGGEA_00401 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
LPJOGGEA_00402 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
LPJOGGEA_00403 5.1e-238 2.7.13.3 T protein histidine kinase activity
LPJOGGEA_00404 2.9e-227 dcuS 2.7.13.3 T protein histidine kinase activity
LPJOGGEA_00405 1.5e-13
LPJOGGEA_00408 5.8e-146 V Psort location CytoplasmicMembrane, score
LPJOGGEA_00410 9.2e-300 O MreB/Mbl protein
LPJOGGEA_00411 6.3e-112 liaI S membrane
LPJOGGEA_00412 6.8e-75 XK27_02470 K LytTr DNA-binding domain protein
LPJOGGEA_00413 0.0 KT response to antibiotic
LPJOGGEA_00414 1.8e-125 yebC M Membrane
LPJOGGEA_00415 1.6e-260 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
LPJOGGEA_00416 5.4e-178 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
LPJOGGEA_00418 2.9e-31 yozG K Transcriptional regulator
LPJOGGEA_00422 1.3e-118
LPJOGGEA_00423 1.5e-158 V ABC transporter
LPJOGGEA_00425 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LPJOGGEA_00426 5.2e-201 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LPJOGGEA_00427 3.4e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LPJOGGEA_00428 1.9e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LPJOGGEA_00429 3.3e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LPJOGGEA_00430 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LPJOGGEA_00432 7.4e-188 manA 5.3.1.8 G mannose-6-phosphate isomerase
LPJOGGEA_00433 4.5e-171 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
LPJOGGEA_00434 0.0 scrA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
LPJOGGEA_00435 1.3e-284 scrB 3.2.1.26 GH32 G invertase
LPJOGGEA_00436 6e-177 scrR K purine nucleotide biosynthetic process
LPJOGGEA_00437 8.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LPJOGGEA_00438 1.7e-61 yqhY S protein conserved in bacteria
LPJOGGEA_00439 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LPJOGGEA_00440 3.3e-85 comEB 3.5.4.12 F ComE operon protein 2
LPJOGGEA_00441 6.3e-188 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
LPJOGGEA_00442 9.5e-33 blpT
LPJOGGEA_00446 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LPJOGGEA_00447 3.8e-168 corA P COG0598 Mg2 and Co2 transporters
LPJOGGEA_00448 2.6e-123 XK27_01040 S Protein of unknown function (DUF1129)
LPJOGGEA_00450 1.7e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LPJOGGEA_00451 2.5e-81 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LPJOGGEA_00452 2.3e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
LPJOGGEA_00453 1.3e-43 XK27_05745
LPJOGGEA_00454 6.1e-229 mutY L A G-specific adenine glycosylase
LPJOGGEA_00456 4.8e-07
LPJOGGEA_00457 1.3e-37
LPJOGGEA_00458 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LPJOGGEA_00459 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LPJOGGEA_00460 6.1e-94 cvpA S toxin biosynthetic process
LPJOGGEA_00461 9.3e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LPJOGGEA_00462 3.5e-155 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LPJOGGEA_00463 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LPJOGGEA_00464 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LPJOGGEA_00465 2.8e-46 azlD S branched-chain amino acid
LPJOGGEA_00466 2.2e-112 azlC E AzlC protein
LPJOGGEA_00467 1.6e-185 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LPJOGGEA_00468 9e-72 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
LPJOGGEA_00469 2.5e-113 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
LPJOGGEA_00470 5.7e-33 ykzG S Belongs to the UPF0356 family
LPJOGGEA_00471 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LPJOGGEA_00472 6.6e-116 pscB M CHAP domain protein
LPJOGGEA_00473 5.2e-264 glnA 6.3.1.2 E glutamine synthetase
LPJOGGEA_00474 2.5e-62 glnR K Transcriptional regulator
LPJOGGEA_00475 2.3e-87 S Fusaric acid resistance protein-like
LPJOGGEA_00476 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
LPJOGGEA_00477 3.5e-13
LPJOGGEA_00478 7.9e-188 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LPJOGGEA_00479 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LPJOGGEA_00480 3.9e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LPJOGGEA_00481 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LPJOGGEA_00482 4e-142 purR 2.4.2.7 F operon repressor
LPJOGGEA_00483 1.2e-177 cbf S 3'-5' exoribonuclease yhaM
LPJOGGEA_00484 1.4e-170 rmuC S RmuC domain protein
LPJOGGEA_00485 1.1e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
LPJOGGEA_00486 7.8e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
LPJOGGEA_00487 4e-164 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LPJOGGEA_00489 4.4e-155 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LPJOGGEA_00490 1.9e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LPJOGGEA_00491 3.6e-143 tatD L Hydrolase, tatd
LPJOGGEA_00492 7.2e-74 yccU S CoA-binding protein
LPJOGGEA_00493 2.4e-50 trxA O Belongs to the thioredoxin family
LPJOGGEA_00494 6e-143 S Macro domain protein
LPJOGGEA_00495 8.2e-59 L thioesterase
LPJOGGEA_00496 1.6e-52 bta 1.8.1.8 CO cell redox homeostasis
LPJOGGEA_00498 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
LPJOGGEA_00499 0.0 3.6.3.8 P cation transport ATPase
LPJOGGEA_00500 7.9e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LPJOGGEA_00501 2.2e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LPJOGGEA_00502 1.7e-237 dltB M Membrane protein involved in D-alanine export
LPJOGGEA_00503 1.3e-298 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LPJOGGEA_00504 0.0 XK27_10035 V abc transporter atp-binding protein
LPJOGGEA_00505 2.5e-290 yfiB1 V abc transporter atp-binding protein
LPJOGGEA_00506 1.9e-99 pvaA M lytic transglycosylase activity
LPJOGGEA_00507 1.9e-178 ndpA S 37-kD nucleoid-associated bacterial protein
LPJOGGEA_00508 1e-229 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LPJOGGEA_00509 2.1e-57 XK27_05710 K FR47-like protein
LPJOGGEA_00510 1.7e-100 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LPJOGGEA_00511 1.4e-142 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LPJOGGEA_00512 1.5e-192 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LPJOGGEA_00513 2.5e-109 tdk 2.7.1.21 F thymidine kinase
LPJOGGEA_00514 5.3e-184 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LPJOGGEA_00515 1.6e-151 gst O Glutathione S-transferase
LPJOGGEA_00516 2.2e-176 nrnA 3.1.13.3, 3.1.3.7 S domain protein
LPJOGGEA_00517 3.4e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LPJOGGEA_00518 4.4e-45 rpmE2 J 50S ribosomal protein L31
LPJOGGEA_00519 3.9e-229 mntH P Mn2 and Fe2 transporters of the NRAMP family
LPJOGGEA_00520 7.6e-164 ypuA S secreted protein
LPJOGGEA_00521 2e-70 yaeR E COG0346 Lactoylglutathione lyase and related lyases
LPJOGGEA_00522 3.5e-132 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
LPJOGGEA_00523 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LPJOGGEA_00524 4.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LPJOGGEA_00525 1.4e-256 noxE P NADH oxidase
LPJOGGEA_00526 1.1e-294 yfmM S abc transporter atp-binding protein
LPJOGGEA_00527 6.1e-83 XK27_01265 S ECF-type riboflavin transporter, S component
LPJOGGEA_00528 1.2e-144 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
LPJOGGEA_00529 9.4e-81 S ECF-type riboflavin transporter, S component
LPJOGGEA_00531 2e-236 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LPJOGGEA_00532 7e-56 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
LPJOGGEA_00534 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LPJOGGEA_00535 1.7e-93 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LPJOGGEA_00536 3.9e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LPJOGGEA_00537 2.9e-22 WQ51_00220 K Helix-turn-helix domain
LPJOGGEA_00538 1e-93 S Protein of unknown function (DUF3278)
LPJOGGEA_00539 0.0 smc D Required for chromosome condensation and partitioning
LPJOGGEA_00540 2.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LPJOGGEA_00541 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LPJOGGEA_00542 3.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LPJOGGEA_00544 5.5e-289 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LPJOGGEA_00545 6.1e-88 pat 2.3.1.183 M acetyltransferase
LPJOGGEA_00546 1.1e-272 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LPJOGGEA_00547 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LPJOGGEA_00548 2e-129 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
LPJOGGEA_00549 2.5e-121 sdaAB 4.3.1.17 E L-serine dehydratase
LPJOGGEA_00550 1.2e-147 sdaAA 4.3.1.17 E L-serine dehydratase
LPJOGGEA_00551 0.0 fruA 3.2.1.1, 3.2.1.26, 3.2.1.65, 3.2.1.80 GH13,GH32 G Belongs to the glycosyl hydrolase 32 family
LPJOGGEA_00552 4.4e-101 yjlA EG membrane
LPJOGGEA_00553 6e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LPJOGGEA_00554 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LPJOGGEA_00555 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LPJOGGEA_00556 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LPJOGGEA_00557 1e-68 S cog cog4699
LPJOGGEA_00558 2.1e-174 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LPJOGGEA_00559 1.3e-143 cglB U protein transport across the cell outer membrane
LPJOGGEA_00560 1.5e-42 comGC U Required for transformation and DNA binding
LPJOGGEA_00561 8.4e-70 cglD NU Competence protein
LPJOGGEA_00562 8.2e-16 NU Type II secretory pathway pseudopilin
LPJOGGEA_00563 2e-71 comGF U Competence protein ComGF
LPJOGGEA_00564 2e-12 comGF U Putative Competence protein ComGF
LPJOGGEA_00565 7.2e-175 ytxK 2.1.1.72 L DNA methylase
LPJOGGEA_00566 2.1e-216 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LPJOGGEA_00567 8.8e-27 lanR K sequence-specific DNA binding
LPJOGGEA_00568 2.9e-98 V CAAX protease self-immunity
LPJOGGEA_00570 6.7e-95 S CAAX amino terminal protease family protein
LPJOGGEA_00571 7.4e-130 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LPJOGGEA_00572 3.5e-202 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
LPJOGGEA_00573 3.5e-08 XK27_10305 S Domain of unknown function (DUF4651)
LPJOGGEA_00574 3.6e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LPJOGGEA_00575 2.6e-09 S NTF2 fold immunity protein
LPJOGGEA_00576 5.1e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LPJOGGEA_00577 2e-186 yeeE S Sulphur transport
LPJOGGEA_00578 8.3e-37 yeeD O sulfur carrier activity
LPJOGGEA_00579 1.5e-65 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LPJOGGEA_00580 1.9e-89 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LPJOGGEA_00584 1e-156 rrmA 2.1.1.187 Q methyltransferase
LPJOGGEA_00585 1.4e-136 S HAD hydrolase, family IA, variant
LPJOGGEA_00586 5.3e-58 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LPJOGGEA_00587 6.7e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LPJOGGEA_00588 2.2e-93 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LPJOGGEA_00589 4.1e-116 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
LPJOGGEA_00590 5.1e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LPJOGGEA_00591 6.3e-185 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
LPJOGGEA_00592 6.9e-93 XK27_08585 S Psort location CytoplasmicMembrane, score
LPJOGGEA_00593 2.1e-140 fnt P Formate nitrite transporter
LPJOGGEA_00594 1.8e-229 XK27_09615 C reductase
LPJOGGEA_00595 6.3e-108 XK27_09620 S FMN reductase (NADPH) activity
LPJOGGEA_00596 2.7e-79 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
LPJOGGEA_00597 5.5e-67 3.5.1.19 Q hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
LPJOGGEA_00598 5.3e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LPJOGGEA_00599 7e-127 WQ51_05710 S Mitochondrial biogenesis AIM24
LPJOGGEA_00600 9.2e-89 cah 4.2.1.1 P Reversible hydration of carbon dioxide
LPJOGGEA_00601 1.2e-50 S Protein of unknown function (DUF3397)
LPJOGGEA_00602 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LPJOGGEA_00603 1.4e-119 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LPJOGGEA_00604 0.0 amiA E ABC transporter, substrate-binding protein, family 5
LPJOGGEA_00605 5.1e-273 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LPJOGGEA_00606 6.7e-232 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
LPJOGGEA_00607 2e-155 hpk9 2.7.13.3 T protein histidine kinase activity
LPJOGGEA_00608 2.5e-207 hpk9 2.7.13.3 T protein histidine kinase activity
LPJOGGEA_00609 4.7e-241 fasC 2.7.13.3 T protein histidine kinase activity
LPJOGGEA_00610 2.8e-134 fasA KT Response regulator of the LytR AlgR family
LPJOGGEA_00611 3.8e-106 csn2 S CRISPR-associated protein (Cas_Csn2)
LPJOGGEA_00612 2e-52 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LPJOGGEA_00613 3.9e-159 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LPJOGGEA_00614 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
LPJOGGEA_00615 1e-111 serB 3.1.3.3 E phosphoserine phosphatase
LPJOGGEA_00616 5.1e-304 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LPJOGGEA_00617 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LPJOGGEA_00618 6.7e-96 3.1.3.18 S IA, variant 1
LPJOGGEA_00619 3.2e-116 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like proteins CidA and or CidB. The LrgAB and CidAB proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
LPJOGGEA_00620 3.5e-56 lrgA S Effector of murein hydrolase LrgA
LPJOGGEA_00623 4.1e-47
LPJOGGEA_00624 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LPJOGGEA_00625 1.8e-96 F AAA domain
LPJOGGEA_00626 1.6e-102 rimL 2.3.1.128, 5.2.1.8 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
LPJOGGEA_00627 1e-107 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LPJOGGEA_00628 1.4e-14 coiA 3.6.4.12 S Competence protein
LPJOGGEA_00629 8.3e-15 T peptidase
LPJOGGEA_00630 2.4e-148 rarD S Transporter
LPJOGGEA_00631 1.9e-150 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LPJOGGEA_00632 2.6e-236 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
LPJOGGEA_00633 4.2e-137 yxkH G deacetylase
LPJOGGEA_00634 2.7e-205 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
LPJOGGEA_00635 4.5e-124 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
LPJOGGEA_00636 6.6e-218 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LPJOGGEA_00637 1.7e-185 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LPJOGGEA_00638 4.5e-227 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
LPJOGGEA_00639 1.3e-142 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
LPJOGGEA_00640 0.0 vanY 3.4.17.14, 3.5.1.28 M D-alanyl-D-alanine carboxypeptidase
LPJOGGEA_00642 4.4e-231 2.7.13.3 T GHKL domain
LPJOGGEA_00643 3.6e-134 agrA KT response regulator
LPJOGGEA_00644 3.1e-07
LPJOGGEA_00645 6.1e-137 agrA KT response regulator
LPJOGGEA_00646 0.0 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
LPJOGGEA_00648 1.2e-09
LPJOGGEA_00649 6.1e-64 K sequence-specific DNA binding
LPJOGGEA_00650 0.0 S dextransucrase activity
LPJOGGEA_00651 5e-90 M Putative cell wall binding repeat
LPJOGGEA_00652 1.4e-236 tcdB S dextransucrase activity
LPJOGGEA_00653 0.0 S dextransucrase activity
LPJOGGEA_00654 4.6e-103 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LPJOGGEA_00655 1.8e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
LPJOGGEA_00656 0.0 M Putative cell wall binding repeat
LPJOGGEA_00657 3.6e-290 S dextransucrase activity
LPJOGGEA_00658 0.0 S dextransucrase activity
LPJOGGEA_00659 0.0 S dextransucrase activity
LPJOGGEA_00661 3.2e-133 XK27_00785 S CAAX protease self-immunity
LPJOGGEA_00662 5.3e-235 EGP Major facilitator Superfamily
LPJOGGEA_00663 1.8e-66 rmaI K Transcriptional regulator, MarR family
LPJOGGEA_00664 8e-89 maa 2.3.1.79 GK Maltose O-acetyltransferase
LPJOGGEA_00665 4.4e-64 2.7.13.3 T Histidine kinase
LPJOGGEA_00666 1.1e-73 K Transcriptional regulatory protein, C terminal
LPJOGGEA_00668 2.4e-14
LPJOGGEA_00669 1e-88 V abc transporter atp-binding protein
LPJOGGEA_00670 0.0 3.5.1.28 M domain protein
LPJOGGEA_00671 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
LPJOGGEA_00672 5.1e-119 K Helix-turn-helix domain, rpiR family
LPJOGGEA_00673 8.7e-18 3.2.1.51 GH95 U LPXTG cell wall anchor motif
LPJOGGEA_00675 4.5e-95
LPJOGGEA_00676 1.4e-51
LPJOGGEA_00677 3.9e-193 higA K Pfam:DUF955
LPJOGGEA_00678 4.8e-157 S double-stranded DNA endodeoxyribonuclease activity
LPJOGGEA_00679 0.0 2.4.1.21 GT5 M Right handed beta helix region
LPJOGGEA_00680 2.1e-172 spd F DNA RNA non-specific endonuclease
LPJOGGEA_00681 7.7e-92 lemA S LemA family
LPJOGGEA_00682 1.3e-133 htpX O Belongs to the peptidase M48B family
LPJOGGEA_00683 5.1e-116 sirR K iron dependent repressor
LPJOGGEA_00684 1.9e-164 sitA P Belongs to the bacterial solute-binding protein 9 family
LPJOGGEA_00685 1e-132 mtsC P ABC-type Mn2 Zn2 transport systems, permease components
LPJOGGEA_00686 5.2e-125 sitB 3.6.3.35 P ABC transporter, ATP-binding protein
LPJOGGEA_00687 6.7e-73 S Psort location CytoplasmicMembrane, score
LPJOGGEA_00688 1.8e-63 S Domain of unknown function (DUF4430)
LPJOGGEA_00689 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LPJOGGEA_00690 1.4e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
LPJOGGEA_00691 9.4e-112 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
LPJOGGEA_00692 3.6e-172 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
LPJOGGEA_00693 6.4e-114 pilD 3.4.23.43 NOU Type II secretory pathway prepilin signal peptidase PulO and related peptidases
LPJOGGEA_00694 9.3e-92 dps P Belongs to the Dps family
LPJOGGEA_00695 5.8e-79 perR P Belongs to the Fur family
LPJOGGEA_00696 4.2e-27 yqgQ S protein conserved in bacteria
LPJOGGEA_00697 3.3e-175 glk 2.7.1.2 G Glucokinase
LPJOGGEA_00698 0.0 typA T GTP-binding protein TypA
LPJOGGEA_00700 7.4e-250 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LPJOGGEA_00701 2.9e-196 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LPJOGGEA_00702 9e-132 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LPJOGGEA_00703 5.8e-242 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LPJOGGEA_00704 3.2e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LPJOGGEA_00705 7.8e-123 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LPJOGGEA_00706 3.2e-101 sepF D cell septum assembly
LPJOGGEA_00707 6.5e-30 yggT D integral membrane protein
LPJOGGEA_00708 5e-145 ylmH S conserved protein, contains S4-like domain
LPJOGGEA_00709 8.4e-138 divIVA D Cell division initiation protein
LPJOGGEA_00710 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LPJOGGEA_00711 2.5e-201 yeaN P transporter
LPJOGGEA_00712 7.8e-149 yitS S EDD domain protein, DegV family
LPJOGGEA_00713 5.8e-95 XK27_08140 K Bacterial regulatory proteins, tetR family
LPJOGGEA_00714 1.2e-95 ypgQ F HD superfamily hydrolase
LPJOGGEA_00715 7.5e-128 S CAAX amino terminal protease family
LPJOGGEA_00716 1.2e-112 cutC P Participates in the control of copper homeostasis
LPJOGGEA_00717 0.0 M family 8
LPJOGGEA_00718 4.9e-252 L Transposase
LPJOGGEA_00719 8.6e-299 norB P Major facilitator superfamily
LPJOGGEA_00720 1.2e-94 tetR K transcriptional regulator
LPJOGGEA_00721 1.4e-153 S Domain of unknown function (DUF4300)
LPJOGGEA_00722 9.2e-125 V CAAX protease self-immunity
LPJOGGEA_00723 2e-154 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LPJOGGEA_00724 1.4e-133 fecE 3.6.3.34 HP ABC transporter
LPJOGGEA_00725 2.9e-174 fatB P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
LPJOGGEA_00726 8.4e-125 ybbA S Putative esterase
LPJOGGEA_00727 1.7e-81 Q Methyltransferase domain
LPJOGGEA_00728 1.2e-76 K TetR family transcriptional regulator
LPJOGGEA_00729 6.4e-48
LPJOGGEA_00730 6.8e-120 V CAAX protease self-immunity
LPJOGGEA_00731 8.9e-11
LPJOGGEA_00732 2.1e-17 M Bacterial lipoprotein
LPJOGGEA_00733 1.6e-59 S Protein of unknown function (DUF1722)
LPJOGGEA_00734 2.8e-63 yqeB S Pyrimidine dimer DNA glycosylase
LPJOGGEA_00736 1.6e-50
LPJOGGEA_00737 2.3e-94 S CAAX protease self-immunity
LPJOGGEA_00738 2.9e-119 estA E GDSL-like Lipase/Acylhydrolase
LPJOGGEA_00739 2.1e-103
LPJOGGEA_00740 6e-286 sulP P Sulfate permease and related transporters (MFS superfamily)
LPJOGGEA_00741 8.4e-148 ycgQ S TIGR03943 family
LPJOGGEA_00742 3.2e-156 XK27_03015 S permease
LPJOGGEA_00744 0.0 yhgF K Transcriptional accessory protein
LPJOGGEA_00745 2.2e-41 pspC KT PspC domain
LPJOGGEA_00746 2.5e-164 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LPJOGGEA_00747 1.1e-144 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LPJOGGEA_00748 3.7e-08 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LPJOGGEA_00749 3e-67 ytxH S General stress protein
LPJOGGEA_00751 3.2e-65 sraP UW Tetratricopeptide repeat
LPJOGGEA_00752 1.3e-33 3.4.24.40 U Large extracellular alpha-helical protein
LPJOGGEA_00753 7e-12 S Accessory secretory protein Sec, Asp5
LPJOGGEA_00754 1.1e-12 S Accessory secretory protein Sec Asp4
LPJOGGEA_00755 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LPJOGGEA_00756 1.6e-68 asp3 S Accessory Sec system protein Asp3
LPJOGGEA_00757 9.4e-302 asp2 3.4.11.5 S Accessory Sec system protein Asp2
LPJOGGEA_00758 2.8e-309 asp1 S Accessory Sec system protein Asp1
LPJOGGEA_00759 2.3e-165 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
LPJOGGEA_00760 8.9e-242 M family 8
LPJOGGEA_00761 0.0 M cog cog1442
LPJOGGEA_00762 1.3e-167 cpsJ M Glycosyltransferase group 2 family protein
LPJOGGEA_00763 6e-235 M Glycosyltransferase, family 8
LPJOGGEA_00764 3.3e-186 nss M transferase activity, transferring glycosyl groups
LPJOGGEA_00765 5.2e-194 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
LPJOGGEA_00766 1.1e-291 tagE 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
LPJOGGEA_00767 6.4e-44 M Glycosyltransferase, family 8
LPJOGGEA_00768 2.9e-160 M Glycosyltransferase, family 8
LPJOGGEA_00769 1.2e-147 epsH S acetyltransferase'
LPJOGGEA_00770 0.0 M family 8
LPJOGGEA_00771 3.4e-155 cat 2.3.1.28 S acetyltransferase'
LPJOGGEA_00773 9.7e-09
LPJOGGEA_00775 0.0 lpdA 1.8.1.4 C Dehydrogenase
LPJOGGEA_00776 1.2e-210 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LPJOGGEA_00777 6.4e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
LPJOGGEA_00778 7.8e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
LPJOGGEA_00779 1.1e-215 hpk9 2.7.13.3 T protein histidine kinase activity
LPJOGGEA_00780 6e-225 2.7.13.3 T protein histidine kinase activity
LPJOGGEA_00781 0.0 S the current gene model (or a revised gene model) may contain a frame shift
LPJOGGEA_00782 6.3e-235 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LPJOGGEA_00783 1.1e-118 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LPJOGGEA_00784 1.1e-217 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LPJOGGEA_00785 1.4e-248 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
LPJOGGEA_00786 9.9e-122 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
LPJOGGEA_00787 2.7e-157 rssA S Phospholipase, patatin family
LPJOGGEA_00788 1.4e-102 estA E Lysophospholipase L1 and related esterases
LPJOGGEA_00789 2.4e-284 S unusual protein kinase
LPJOGGEA_00790 4.9e-39 S granule-associated protein
LPJOGGEA_00791 7.5e-285 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LPJOGGEA_00792 8e-197 S hmm pf01594
LPJOGGEA_00793 9.9e-106 G Belongs to the phosphoglycerate mutase family
LPJOGGEA_00794 1.8e-107 G Belongs to the phosphoglycerate mutase family
LPJOGGEA_00795 5.3e-107 pgm G Belongs to the phosphoglycerate mutase family
LPJOGGEA_00796 1.2e-149 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
LPJOGGEA_00797 3e-195 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LPJOGGEA_00798 2.2e-76 ilvN 2.2.1.6 E Acetolactate synthase
LPJOGGEA_00799 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
LPJOGGEA_00800 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
LPJOGGEA_00801 3.8e-304 yloV S kinase related to dihydroxyacetone kinase
LPJOGGEA_00802 1.4e-57 asp S cog cog1302
LPJOGGEA_00803 2.1e-225 norN V Mate efflux family protein
LPJOGGEA_00804 9.2e-278 thrC 4.2.3.1 E Threonine synthase
LPJOGGEA_00807 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LPJOGGEA_00808 0.0 pepO 3.4.24.71 O Peptidase family M13
LPJOGGEA_00809 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
LPJOGGEA_00810 0.0 treB 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
LPJOGGEA_00811 3e-125 treR K trehalose operon
LPJOGGEA_00812 2.2e-94 ywlG S Belongs to the UPF0340 family
LPJOGGEA_00815 8.2e-165 fba 4.1.2.13, 4.1.2.29 G aldolase
LPJOGGEA_00817 6.9e-237 6.3.2.2 H gamma-glutamylcysteine synthetase
LPJOGGEA_00818 1.1e-217 araT 2.6.1.1 E Aminotransferase
LPJOGGEA_00819 5.5e-141 recO L Involved in DNA repair and RecF pathway recombination
LPJOGGEA_00820 6.2e-180 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LPJOGGEA_00821 8.1e-30 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LPJOGGEA_00822 8.9e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
LPJOGGEA_00823 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LPJOGGEA_00824 4.5e-175
LPJOGGEA_00825 9.9e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LPJOGGEA_00826 9.4e-189 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
LPJOGGEA_00827 2.9e-99 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LPJOGGEA_00828 1.5e-33
LPJOGGEA_00829 2.5e-294 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
LPJOGGEA_00830 1.4e-239 purD 6.3.4.13 F Belongs to the GARS family
LPJOGGEA_00831 5.3e-81 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LPJOGGEA_00832 5.1e-201 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LPJOGGEA_00833 6.1e-174 1.1.1.169 H Ketopantoate reductase
LPJOGGEA_00834 3.3e-33
LPJOGGEA_00835 2.1e-134 J Domain of unknown function (DUF4041)
LPJOGGEA_00837 3.3e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LPJOGGEA_00838 0.0 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LPJOGGEA_00840 1.3e-103 L recombinase activity
LPJOGGEA_00844 1.4e-19
LPJOGGEA_00847 0.0 S helicase activity
LPJOGGEA_00848 7.7e-138 S Replication-relaxation
LPJOGGEA_00850 1.8e-298 L Recombinase
LPJOGGEA_00851 3.1e-83 nrdI F Belongs to the NrdI family
LPJOGGEA_00852 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LPJOGGEA_00853 5.1e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LPJOGGEA_00854 0.0 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
LPJOGGEA_00855 4.3e-236 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LPJOGGEA_00856 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LPJOGGEA_00857 3.4e-112 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
LPJOGGEA_00858 2.9e-194 yhjX P Major Facilitator
LPJOGGEA_00859 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LPJOGGEA_00860 9.5e-85 V VanZ like family
LPJOGGEA_00861 1.9e-182 D nuclear chromosome segregation
LPJOGGEA_00862 2.2e-123 glnQ E abc transporter atp-binding protein
LPJOGGEA_00863 6.9e-276 glnP P ABC transporter
LPJOGGEA_00864 1.5e-152 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LPJOGGEA_00865 8.3e-18 S Protein of unknown function (DUF3021)
LPJOGGEA_00866 2.7e-124 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LPJOGGEA_00867 1.9e-182 tagO 2.7.8.33, 2.7.8.35 M transferase
LPJOGGEA_00868 1.7e-137 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
LPJOGGEA_00869 6.3e-235 sufD O assembly protein SufD
LPJOGGEA_00870 1.5e-233 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LPJOGGEA_00871 2.7e-73 nifU C SUF system FeS assembly protein, NifU family
LPJOGGEA_00872 2.9e-273 sufB O assembly protein SufB
LPJOGGEA_00873 2.3e-311 oppA E ABC transporter substrate-binding protein
LPJOGGEA_00874 9.7e-161 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
LPJOGGEA_00875 1.9e-165 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
LPJOGGEA_00876 6.6e-198 oppD P Belongs to the ABC transporter superfamily
LPJOGGEA_00877 4.1e-167 oppF P Belongs to the ABC transporter superfamily
LPJOGGEA_00878 2.7e-26
LPJOGGEA_00879 1.6e-157 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LPJOGGEA_00880 2.4e-181 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LPJOGGEA_00881 3.8e-70 adcR K transcriptional
LPJOGGEA_00882 2.7e-134 adcC 3.6.3.35 P ABC transporter, ATP-binding protein
LPJOGGEA_00883 5.6e-128 adcB P ABC transporter (Permease
LPJOGGEA_00884 2.7e-158 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
LPJOGGEA_00885 0.0 ptsG 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
LPJOGGEA_00886 1.7e-156 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
LPJOGGEA_00887 6.2e-257 pgi 5.3.1.9 G Belongs to the GPI family
LPJOGGEA_00888 1.2e-147 Z012_04635 K sequence-specific DNA binding
LPJOGGEA_00889 5.4e-268 V ABC transporter
LPJOGGEA_00890 6.1e-126 yeeN K transcriptional regulatory protein
LPJOGGEA_00891 8.9e-48 yajC U protein transport
LPJOGGEA_00892 5.3e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LPJOGGEA_00893 7.2e-144 cdsA 2.7.7.41 S Belongs to the CDS family
LPJOGGEA_00894 1.3e-227 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
LPJOGGEA_00895 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LPJOGGEA_00896 0.0 WQ51_06230 S ABC transporter
LPJOGGEA_00897 1.4e-142 cmpC S abc transporter atp-binding protein
LPJOGGEA_00898 4.9e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LPJOGGEA_00899 1.2e-286 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LPJOGGEA_00901 1.9e-44
LPJOGGEA_00902 5.8e-55 S TM2 domain
LPJOGGEA_00903 5.1e-159 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LPJOGGEA_00904 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LPJOGGEA_00905 6.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LPJOGGEA_00906 2.8e-24 secE U Belongs to the SecE SEC61-gamma family
LPJOGGEA_00907 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
LPJOGGEA_00908 2.3e-67 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
LPJOGGEA_00909 2e-146 cof S Sucrose-6F-phosphate phosphohydrolase
LPJOGGEA_00910 8.2e-137 glcR K transcriptional regulator (DeoR family)
LPJOGGEA_00911 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LPJOGGEA_00912 4.5e-74 K transcriptional
LPJOGGEA_00913 6.1e-235 S COG1073 Hydrolases of the alpha beta superfamily
LPJOGGEA_00914 1.2e-25 yjdF S Protein of unknown function (DUF2992)
LPJOGGEA_00915 6.2e-15 3.2.2.21 S YCII-related domain
LPJOGGEA_00916 4.3e-150 cylA V abc transporter atp-binding protein
LPJOGGEA_00917 6.2e-130 cylB V ABC-2 type transporter
LPJOGGEA_00918 9e-75 K COG3279 Response regulator of the LytR AlgR family
LPJOGGEA_00919 3.4e-31 S Protein of unknown function (DUF3021)
LPJOGGEA_00920 6.5e-112 mta K Transcriptional
LPJOGGEA_00921 2.1e-120 yhcA V abc transporter atp-binding protein
LPJOGGEA_00922 2.8e-214 macB_2 V FtsX-like permease family
LPJOGGEA_00923 1.5e-272 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LPJOGGEA_00924 2.2e-148 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LPJOGGEA_00925 2e-71 yhaI L Membrane
LPJOGGEA_00926 1.1e-253 pepC 3.4.22.40 E aminopeptidase
LPJOGGEA_00927 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LPJOGGEA_00928 2.1e-108 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LPJOGGEA_00929 5.8e-94 ypsA S Belongs to the UPF0398 family
LPJOGGEA_00930 5.6e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LPJOGGEA_00931 1.3e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
LPJOGGEA_00932 2.3e-276 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
LPJOGGEA_00933 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
LPJOGGEA_00934 9.6e-23
LPJOGGEA_00935 4.7e-257 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
LPJOGGEA_00936 4.1e-89 XK27_09675 K histone acetyltransferase HPA2 and related acetyltransferases
LPJOGGEA_00937 4.9e-303 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LPJOGGEA_00938 1.2e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LPJOGGEA_00939 3.4e-166 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LPJOGGEA_00940 2e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
LPJOGGEA_00941 1e-128 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LPJOGGEA_00942 2.5e-94 XK27_09705 6.1.1.14 S HD superfamily hydrolase
LPJOGGEA_00943 2.2e-101 ybhL S Belongs to the BI1 family
LPJOGGEA_00944 1.2e-11 ycdA S Domain of unknown function (DUF4352)
LPJOGGEA_00945 3.6e-243 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LPJOGGEA_00946 1.4e-90 K transcriptional regulator
LPJOGGEA_00947 1.6e-36 yneF S UPF0154 protein
LPJOGGEA_00948 1.5e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LPJOGGEA_00949 3.9e-184 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LPJOGGEA_00950 1.7e-98 XK27_09740 S Phosphoesterase
LPJOGGEA_00951 8.3e-87 ykuL S CBS domain
LPJOGGEA_00952 2.1e-132 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
LPJOGGEA_00953 1.4e-122 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LPJOGGEA_00954 1.5e-95 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LPJOGGEA_00955 1.3e-131 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LPJOGGEA_00956 1.4e-13 yidD M Could be involved in insertion of integral membrane proteins into the membrane
LPJOGGEA_00957 9.3e-259 trkH P Cation transport protein
LPJOGGEA_00958 2.6e-247 trkA P Potassium transporter peripheral membrane component
LPJOGGEA_00959 5.1e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LPJOGGEA_00960 5.5e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LPJOGGEA_00961 3e-108 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
LPJOGGEA_00962 3.9e-154 K sequence-specific DNA binding
LPJOGGEA_00963 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
LPJOGGEA_00964 6.4e-54 yhaI L Membrane
LPJOGGEA_00965 8.7e-40 S Domain of unknown function (DUF4173)
LPJOGGEA_00966 1.5e-94 ureI S AmiS/UreI family transporter
LPJOGGEA_00967 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
LPJOGGEA_00968 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
LPJOGGEA_00969 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
LPJOGGEA_00970 2.5e-77 ureE O enzyme active site formation
LPJOGGEA_00971 2.6e-129 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
LPJOGGEA_00972 4.7e-111 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LPJOGGEA_00973 1.3e-159 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
LPJOGGEA_00974 4.6e-177 cbiM P biosynthesis protein CbiM
LPJOGGEA_00975 4.1e-136 P cobalt transport protein
LPJOGGEA_00976 3.4e-129 cbiO P ABC transporter
LPJOGGEA_00977 1.2e-136 ET ABC transporter substrate-binding protein
LPJOGGEA_00978 3.2e-164 metQ M Belongs to the NlpA lipoprotein family
LPJOGGEA_00979 4.5e-263 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
LPJOGGEA_00980 3.7e-188 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LPJOGGEA_00981 1.2e-99 metI P ABC transporter (Permease
LPJOGGEA_00982 1.8e-210 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LPJOGGEA_00983 4.2e-121 ktrA P COG0569 K transport systems, NAD-binding component
LPJOGGEA_00984 1.9e-237 P COG0168 Trk-type K transport systems, membrane components
LPJOGGEA_00985 2.6e-129 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
LPJOGGEA_00986 1.8e-90 yceD K metal-binding, possibly nucleic acid-binding protein
LPJOGGEA_00987 7.9e-123 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LPJOGGEA_00988 1.2e-280 T PhoQ Sensor
LPJOGGEA_00989 1.4e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LPJOGGEA_00990 1.6e-216 dnaB L Replication initiation and membrane attachment
LPJOGGEA_00991 1.5e-166 dnaI L Primosomal protein DnaI
LPJOGGEA_00992 2.6e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
LPJOGGEA_00993 1.1e-102
LPJOGGEA_00994 2e-228 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LPJOGGEA_00995 2.5e-62 manO S protein conserved in bacteria
LPJOGGEA_00996 3.3e-169 manN G PTS system mannose fructose sorbose family IID component
LPJOGGEA_00997 2.6e-117 manM G pts system
LPJOGGEA_00998 4.9e-174 manL 2.7.1.191 G pts system
LPJOGGEA_00999 2e-67 manO S Protein conserved in bacteria
LPJOGGEA_01000 6.3e-160 manN G PTS system mannose fructose sorbose family IID component
LPJOGGEA_01001 4.7e-135 manY G pts system
LPJOGGEA_01002 6.2e-169 manL 2.7.1.191 G pts system
LPJOGGEA_01003 1.2e-137 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
LPJOGGEA_01004 3.5e-154 yitU 3.1.3.104 S hydrolases of the HAD superfamily
LPJOGGEA_01005 1.6e-247 pbuO S permease
LPJOGGEA_01006 2.1e-76 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
LPJOGGEA_01007 1.9e-89 XK27_05885 2.3.1.82 M phosphinothricin N-acetyltransferase activity
LPJOGGEA_01008 2e-212 brpA K Transcriptional
LPJOGGEA_01009 2.3e-81 rimP S Required for maturation of 30S ribosomal subunits
LPJOGGEA_01010 2.4e-196 nusA K Participates in both transcription termination and antitermination
LPJOGGEA_01011 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
LPJOGGEA_01012 8e-42 ylxQ J ribosomal protein
LPJOGGEA_01013 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LPJOGGEA_01014 8.6e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LPJOGGEA_01015 1.3e-99 yvdD 3.2.2.10 S Belongs to the LOG family
LPJOGGEA_01016 8.7e-273 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LPJOGGEA_01017 7.7e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
LPJOGGEA_01018 0.0 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
LPJOGGEA_01019 2.6e-200 metB 2.5.1.48, 4.4.1.8 E cystathionine
LPJOGGEA_01020 1.6e-221 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
LPJOGGEA_01021 0.0 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
LPJOGGEA_01022 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
LPJOGGEA_01023 5.7e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LPJOGGEA_01024 3.7e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LPJOGGEA_01025 3e-72 ylbF S Belongs to the UPF0342 family
LPJOGGEA_01026 7.1e-46 ylbG S UPF0298 protein
LPJOGGEA_01027 1.6e-132 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
LPJOGGEA_01028 2e-157 yjjH S Calcineurin-like phosphoesterase
LPJOGGEA_01029 9.3e-206 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LPJOGGEA_01030 5.7e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LPJOGGEA_01031 3.2e-124 ftsE D cell division ATP-binding protein FtsE
LPJOGGEA_01032 9.5e-164 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
LPJOGGEA_01033 1.9e-91 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
LPJOGGEA_01034 4.3e-177 yubA S permease
LPJOGGEA_01035 3.1e-223 G COG0457 FOG TPR repeat
LPJOGGEA_01036 1.2e-97 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LPJOGGEA_01037 5.9e-310 lytC 3.4.17.14, 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
LPJOGGEA_01038 7e-69 lytC 3.4.17.14, 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
LPJOGGEA_01039 1.5e-233 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LPJOGGEA_01040 1.1e-86 ebsA S Family of unknown function (DUF5322)
LPJOGGEA_01041 2.4e-17 M LysM domain
LPJOGGEA_01042 1.6e-120 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
LPJOGGEA_01043 1e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LPJOGGEA_01044 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
LPJOGGEA_01045 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LPJOGGEA_01046 1.1e-83 XK27_03610 K Gnat family
LPJOGGEA_01047 1.1e-92 yybC
LPJOGGEA_01048 4.9e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
LPJOGGEA_01049 7.2e-272 pepV 3.5.1.18 E Dipeptidase
LPJOGGEA_01050 9.1e-112 ung2 3.2.2.27 L Uracil-DNA glycosylase
LPJOGGEA_01052 0.0 sbcC L ATPase involved in DNA repair
LPJOGGEA_01053 8.7e-218 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
LPJOGGEA_01054 0.0 GM domain, Protein
LPJOGGEA_01055 0.0 zmpB M signal peptide protein, YSIRK family
LPJOGGEA_01056 0.0 M Pilin isopeptide linkage domain protein
LPJOGGEA_01058 6.8e-178 yegQ O Peptidase U32
LPJOGGEA_01059 7.5e-252 yegQ O Peptidase U32
LPJOGGEA_01060 5.2e-53 S CHY zinc finger
LPJOGGEA_01061 3.2e-87 bioY S biotin synthase
LPJOGGEA_01063 1.1e-33 XK27_12190 S protein conserved in bacteria
LPJOGGEA_01064 2.5e-234 mntH P H( )-stimulated, divalent metal cation uptake system
LPJOGGEA_01066 8.3e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LPJOGGEA_01067 4.2e-138 M LysM domain
LPJOGGEA_01068 8.4e-23
LPJOGGEA_01069 1.5e-174 S hydrolase
LPJOGGEA_01070 1.2e-114 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
LPJOGGEA_01071 1e-81 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LPJOGGEA_01072 6.3e-144 XK27_00880 3.4.17.14, 3.5.1.28 M Glycosyl hydrolase, family 25
LPJOGGEA_01073 2.4e-27 P Hemerythrin HHE cation binding domain protein
LPJOGGEA_01074 1.9e-155 5.2.1.8 G hydrolase
LPJOGGEA_01075 5.2e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LPJOGGEA_01076 2.4e-212 MA20_36090 S Protein of unknown function (DUF2974)
LPJOGGEA_01077 5.2e-241 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
LPJOGGEA_01078 3.6e-134 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
LPJOGGEA_01079 7.2e-116 cps4C M biosynthesis protein
LPJOGGEA_01080 6.1e-113 cpsD D COG0489 ATPases involved in chromosome partitioning
LPJOGGEA_01081 1.3e-257 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
LPJOGGEA_01082 5.7e-214 rgpAc GT4 M group 1 family protein
LPJOGGEA_01083 3.4e-158 M LPS biosynthesis protein
LPJOGGEA_01084 3.6e-118 ispD 2.7.7.60, 4.6.1.12 I 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
LPJOGGEA_01085 2.9e-148 eps4I GM Dehydratase
LPJOGGEA_01086 6.9e-136 M Glycosyl transferase, family 2
LPJOGGEA_01087 5.9e-81 MA20_43635 M Capsular polysaccharide synthesis protein
LPJOGGEA_01088 7.8e-40 S Glycosyltransferase like family 2
LPJOGGEA_01089 2e-39 S O-antigen ligase like membrane protein
LPJOGGEA_01090 2.6e-96 cps1B GT2,GT4 M Glycosyl transferases group 1
LPJOGGEA_01091 4.7e-231 epsU S Polysaccharide biosynthesis protein
LPJOGGEA_01092 2e-213 glf 5.4.99.9 M UDP-galactopyranose mutase
LPJOGGEA_01093 3e-174 wbbI M transferase activity, transferring glycosyl groups
LPJOGGEA_01094 3e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LPJOGGEA_01095 2.9e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
LPJOGGEA_01096 2.4e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LPJOGGEA_01097 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
LPJOGGEA_01098 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LPJOGGEA_01099 6.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LPJOGGEA_01100 8.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LPJOGGEA_01101 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LPJOGGEA_01102 1.6e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LPJOGGEA_01103 1.1e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LPJOGGEA_01104 3.5e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
LPJOGGEA_01105 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LPJOGGEA_01106 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LPJOGGEA_01107 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LPJOGGEA_01108 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LPJOGGEA_01109 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LPJOGGEA_01110 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LPJOGGEA_01111 6.6e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LPJOGGEA_01112 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LPJOGGEA_01113 1.3e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LPJOGGEA_01114 1.9e-23 rpmD J ribosomal protein l30
LPJOGGEA_01115 5.7e-58 rplO J binds to the 23S rRNA
LPJOGGEA_01116 2e-228 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LPJOGGEA_01117 1.2e-117 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LPJOGGEA_01118 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LPJOGGEA_01119 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LPJOGGEA_01120 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LPJOGGEA_01121 1.9e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LPJOGGEA_01122 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LPJOGGEA_01123 4.4e-62 rplQ J ribosomal protein l17
LPJOGGEA_01124 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
LPJOGGEA_01125 3.1e-69 argR K Regulates arginine biosynthesis genes
LPJOGGEA_01126 1.9e-56 ymcA 3.6.3.21 S Belongs to the UPF0342 family
LPJOGGEA_01127 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LPJOGGEA_01128 1e-78 S Protein of unknown function (DUF3021)
LPJOGGEA_01129 1.4e-69 K LytTr DNA-binding domain
LPJOGGEA_01131 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LPJOGGEA_01133 2e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LPJOGGEA_01134 2.2e-107 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
LPJOGGEA_01135 1.9e-231 cinA 3.5.1.42 S Belongs to the CinA family
LPJOGGEA_01136 6.1e-205 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LPJOGGEA_01137 0.0 glgE 2.3.1.12, 2.4.99.16, 3.2.1.1, 3.2.1.14 GH13,GH18 M Pilin isopeptide linkage domain protein
LPJOGGEA_01139 3.8e-128 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LPJOGGEA_01140 1e-235 vicK 2.7.13.3 T Histidine kinase
LPJOGGEA_01141 6e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
LPJOGGEA_01142 3.1e-40 S Protein of unknown function (DUF454)
LPJOGGEA_01143 1.6e-206 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
LPJOGGEA_01144 2e-146 yidA S hydrolases of the HAD superfamily
LPJOGGEA_01145 1.9e-158 XK27_00115 2.3.1.128 K Acetyltransferase GNAT family
LPJOGGEA_01146 8.4e-142 XK27_00120 2.4.2.3 F Phosphorylase superfamily
LPJOGGEA_01147 5.3e-68 ywiB S Domain of unknown function (DUF1934)
LPJOGGEA_01148 0.0 pacL 3.6.3.8 P cation transport ATPase
LPJOGGEA_01149 4e-212 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LPJOGGEA_01150 8.4e-137
LPJOGGEA_01152 5.5e-250 ydaM M Glycosyltransferases, probably involved in cell wall biogenesis
LPJOGGEA_01153 2e-208 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
LPJOGGEA_01155 2e-233 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LPJOGGEA_01156 5.5e-26 epuA S DNA-directed RNA polymerase subunit beta
LPJOGGEA_01157 6.5e-154 endA F DNA RNA non-specific endonuclease
LPJOGGEA_01158 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LPJOGGEA_01159 7.7e-83 comFC K competence protein
LPJOGGEA_01160 1e-248 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LPJOGGEA_01161 4.5e-109 yvyE 3.4.13.9 S YigZ family
LPJOGGEA_01162 1.8e-167 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
LPJOGGEA_01163 5.4e-113 acuB S CBS domain
LPJOGGEA_01164 1.6e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
LPJOGGEA_01165 3.1e-136 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
LPJOGGEA_01166 4.9e-139 livM E Belongs to the binding-protein-dependent transport system permease family
LPJOGGEA_01167 4.2e-145 livH E Belongs to the binding-protein-dependent transport system permease family
LPJOGGEA_01168 3.1e-212 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
LPJOGGEA_01169 1e-29 rpsT J Binds directly to 16S ribosomal RNA
LPJOGGEA_01170 5.6e-172 coaA 2.7.1.33 F Pantothenic acid kinase
LPJOGGEA_01171 1.1e-104 rsmC 2.1.1.172 J Methyltransferase small domain protein
LPJOGGEA_01172 1.9e-231 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
LPJOGGEA_01173 3.5e-112 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LPJOGGEA_01174 1.3e-64 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
LPJOGGEA_01175 2.8e-191 tcsA S membrane
LPJOGGEA_01176 6.4e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
LPJOGGEA_01177 8.6e-177 yufP S Belongs to the binding-protein-dependent transport system permease family
LPJOGGEA_01178 1.2e-169 yufQ S Belongs to the binding-protein-dependent transport system permease family
LPJOGGEA_01179 7.5e-120 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
LPJOGGEA_01180 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
LPJOGGEA_01181 6.8e-81 ypmB S Protein conserved in bacteria
LPJOGGEA_01182 1.1e-212 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
LPJOGGEA_01183 8.4e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
LPJOGGEA_01184 1.3e-19
LPJOGGEA_01185 5.6e-201 pmrB EGP Major facilitator Superfamily
LPJOGGEA_01186 6.6e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
LPJOGGEA_01187 2.6e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LPJOGGEA_01188 9.7e-82 queD 4.1.2.50, 4.2.3.12 H synthase
LPJOGGEA_01189 1.2e-134 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
LPJOGGEA_01190 1.4e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
LPJOGGEA_01191 9.7e-198 D nuclear chromosome segregation
LPJOGGEA_01192 3.7e-137 yejC S cyclic nucleotide-binding protein
LPJOGGEA_01193 7e-164 rapZ S Displays ATPase and GTPase activities
LPJOGGEA_01194 4.3e-183 ybhK S Required for morphogenesis under gluconeogenic growth conditions
LPJOGGEA_01195 5.7e-161 whiA K May be required for sporulation
LPJOGGEA_01196 1.5e-274 pepD E Dipeptidase
LPJOGGEA_01197 2.3e-145 XK27_10720 D peptidase activity
LPJOGGEA_01198 4.4e-291 adcA P Belongs to the bacterial solute-binding protein 9 family
LPJOGGEA_01199 2.6e-09
LPJOGGEA_01201 5.5e-173 yeiH S Membrane
LPJOGGEA_01202 1.3e-128 mur1 3.4.17.14, 3.5.1.28 NU muramidase
LPJOGGEA_01203 2.9e-165 cpsY K Transcriptional regulator
LPJOGGEA_01204 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LPJOGGEA_01205 6.6e-59 phnA P Alkylphosphonate utilization operon protein PhnA
LPJOGGEA_01206 4e-105 artQ P ABC transporter (Permease
LPJOGGEA_01207 8.8e-113 glnQ 3.6.3.21 E abc transporter atp-binding protein
LPJOGGEA_01208 4.6e-157 aatB ET ABC transporter substrate-binding protein
LPJOGGEA_01209 1.8e-270 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LPJOGGEA_01210 6.4e-50
LPJOGGEA_01211 1.6e-45
LPJOGGEA_01212 7.2e-189 adhP 1.1.1.1 C alcohol dehydrogenase
LPJOGGEA_01213 3.7e-97 rimL J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
LPJOGGEA_01214 2.3e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LPJOGGEA_01215 7.7e-126 gntR1 K transcriptional
LPJOGGEA_01216 2e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LPJOGGEA_01217 1.2e-272 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LPJOGGEA_01218 2.7e-86
LPJOGGEA_01219 1.3e-90 niaR S small molecule binding protein (contains 3H domain)
LPJOGGEA_01220 4e-127 K DNA-binding helix-turn-helix protein
LPJOGGEA_01221 9.4e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LPJOGGEA_01222 4.5e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LPJOGGEA_01223 1.9e-164 GK ROK family
LPJOGGEA_01224 1.7e-156 dprA LU DNA protecting protein DprA
LPJOGGEA_01225 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LPJOGGEA_01226 6.4e-85 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
LPJOGGEA_01227 3.5e-52 V ABC-2 family transporter protein
LPJOGGEA_01229 1.4e-145 S TraX protein
LPJOGGEA_01230 2.1e-120 KT Transcriptional regulatory protein, C terminal
LPJOGGEA_01231 1.7e-230 T PhoQ Sensor
LPJOGGEA_01232 1.1e-258 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LPJOGGEA_01233 3.5e-224 XK27_05470 E Methionine synthase
LPJOGGEA_01234 5.1e-69 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
LPJOGGEA_01235 1.9e-253 V Glucan-binding protein C
LPJOGGEA_01236 1.5e-121 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LPJOGGEA_01237 4.3e-233 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
LPJOGGEA_01238 1.6e-89 S Protein of unknown function (DUF1697)
LPJOGGEA_01239 1.8e-150 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LPJOGGEA_01240 1.8e-181 clcA_2 P Chloride transporter, ClC family
LPJOGGEA_01241 1.5e-137 yfeJ 6.3.5.2 F glutamine amidotransferase
LPJOGGEA_01242 4e-130 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
LPJOGGEA_01243 1e-20 L the current gene model (or a revised gene model) may contain a frame shift
LPJOGGEA_01245 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LPJOGGEA_01248 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
LPJOGGEA_01249 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
LPJOGGEA_01250 1.2e-41 C Pyridoxamine 5'-phosphate oxidase
LPJOGGEA_01251 1.5e-96 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
LPJOGGEA_01252 1e-78 S Macro domain
LPJOGGEA_01253 6.2e-68 mgrA K Transcriptional regulator, MarR family
LPJOGGEA_01254 1.2e-133 1.6.5.2 GM NmrA-like family
LPJOGGEA_01255 4.1e-170 C alcohol dehydrogenase
LPJOGGEA_01256 7.8e-129 proV E abc transporter atp-binding protein
LPJOGGEA_01257 2.9e-263 proWX P ABC transporter
LPJOGGEA_01258 6.5e-108 magIII L Base excision DNA repair protein, HhH-GPD family
LPJOGGEA_01259 5.3e-139 S Phenazine biosynthesis protein
LPJOGGEA_01260 2.8e-92 2.7.7.65 T Psort location CytoplasmicMembrane, score
LPJOGGEA_01261 1.3e-132 cbiQ P Cobalt transport protein
LPJOGGEA_01262 1.1e-158 P abc transporter atp-binding protein
LPJOGGEA_01263 2.3e-150 cbiO2 P 'abc transporter, ATP-binding protein
LPJOGGEA_01264 2.3e-113 tnp L DDE domain
LPJOGGEA_01265 1.8e-11
LPJOGGEA_01266 7.5e-55 S Protein of unknown function with HXXEE motif
LPJOGGEA_01267 1.4e-104 K Transcriptional regulator, TetR family
LPJOGGEA_01268 5.6e-153 czcD P cation diffusion facilitator family transporter
LPJOGGEA_01269 2e-192 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
LPJOGGEA_01270 1.5e-186 adhB 1.1.1.1, 1.1.1.14 E Zinc-binding dehydrogenase
LPJOGGEA_01271 3.3e-42 2.4.2.3 F Phosphorylase superfamily
LPJOGGEA_01272 8.3e-111 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
LPJOGGEA_01273 1.5e-152 S von Willebrand factor (vWF) type A domain
LPJOGGEA_01274 1e-176 yclQ P ABC-type enterochelin transport system, periplasmic component
LPJOGGEA_01275 3.4e-231 dinF V Mate efflux family protein
LPJOGGEA_01276 1.9e-262 S Psort location CytoplasmicMembrane, score
LPJOGGEA_01277 1.9e-308 FbpA K RNA-binding protein homologous to eukaryotic snRNP
LPJOGGEA_01278 3.4e-133 S TraX protein
LPJOGGEA_01279 1.8e-93 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
LPJOGGEA_01280 5e-145 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
LPJOGGEA_01281 7.7e-177 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LPJOGGEA_01282 7e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LPJOGGEA_01283 4.4e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LPJOGGEA_01284 8.8e-241 nylA 3.5.1.4 J Belongs to the amidase family
LPJOGGEA_01285 9.9e-125 yckB ET Belongs to the bacterial solute-binding protein 3 family
LPJOGGEA_01286 3.2e-81 yecS P ABC transporter (Permease
LPJOGGEA_01287 0.0 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
LPJOGGEA_01288 3.3e-169 bglC K Transcriptional regulator
LPJOGGEA_01289 1.2e-244 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LPJOGGEA_01290 2e-239 agcS E (Alanine) symporter
LPJOGGEA_01291 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
LPJOGGEA_01292 3.6e-238 metY 2.5.1.49 E o-acetylhomoserine
LPJOGGEA_01293 4.3e-138 S haloacid dehalogenase-like hydrolase
LPJOGGEA_01294 1.2e-85 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LPJOGGEA_01295 3.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
LPJOGGEA_01296 6.1e-35 M1-755 P Hemerythrin HHE cation binding domain protein
LPJOGGEA_01297 8.2e-241 XK27_04775 S hemerythrin HHE cation binding domain
LPJOGGEA_01298 8.4e-143 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LPJOGGEA_01299 7.4e-169 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
LPJOGGEA_01300 1.6e-70 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LPJOGGEA_01301 1e-44 yktA S Belongs to the UPF0223 family
LPJOGGEA_01302 3.8e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
LPJOGGEA_01303 4.6e-249 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
LPJOGGEA_01304 2.2e-154 pstS P phosphate
LPJOGGEA_01305 1.4e-156 pstC P probably responsible for the translocation of the substrate across the membrane
LPJOGGEA_01306 9.1e-156 pstA P phosphate transport system permease
LPJOGGEA_01307 4e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LPJOGGEA_01308 4.6e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LPJOGGEA_01309 3.2e-113 phoU P Plays a role in the regulation of phosphate uptake
LPJOGGEA_01310 0.0 pepN 3.4.11.2 E aminopeptidase
LPJOGGEA_01311 2.8e-191 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
LPJOGGEA_01312 5.5e-186 lplA 6.3.1.20 H Lipoate-protein ligase
LPJOGGEA_01313 1.3e-37
LPJOGGEA_01314 1.1e-190 L Transposase
LPJOGGEA_01315 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LPJOGGEA_01316 7.8e-301 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
LPJOGGEA_01317 3.5e-156 malR K Transcriptional regulator
LPJOGGEA_01318 3.9e-229 malX G ABC transporter
LPJOGGEA_01319 3.3e-250 malF P ABC transporter (Permease
LPJOGGEA_01320 9.8e-152 malG P ABC transporter (Permease
LPJOGGEA_01321 1.4e-212 msmX P Belongs to the ABC transporter superfamily
LPJOGGEA_01322 3e-24 tatA U protein secretion
LPJOGGEA_01323 1.2e-118 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LPJOGGEA_01324 2.3e-285 ywbL P COG0672 High-affinity Fe2 Pb2 permease
LPJOGGEA_01325 4e-231 ycdB P peroxidase
LPJOGGEA_01326 6.4e-146 ycdO P periplasmic lipoprotein involved in iron transport
LPJOGGEA_01327 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LPJOGGEA_01328 4.4e-68 lytC 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
LPJOGGEA_01329 2.8e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LPJOGGEA_01330 3.4e-14 rpmH J Ribosomal protein L34
LPJOGGEA_01331 1.5e-103 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
LPJOGGEA_01332 2e-106 K Transcriptional regulator
LPJOGGEA_01333 1.5e-181 jag S RNA-binding protein
LPJOGGEA_01334 1.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LPJOGGEA_01335 3.8e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LPJOGGEA_01336 7.1e-264 argH 4.3.2.1 E Argininosuccinate lyase
LPJOGGEA_01337 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
LPJOGGEA_01338 5.9e-132 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LPJOGGEA_01339 1.6e-177 prmA J Ribosomal protein L11 methyltransferase
LPJOGGEA_01340 7.2e-83 XK27_02675 K Acetyltransferase GNAT Family
LPJOGGEA_01341 3.2e-77 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
LPJOGGEA_01342 6.4e-84 XK27_03960 S Protein of unknown function (DUF3013)
LPJOGGEA_01343 4.9e-309 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LPJOGGEA_01344 1.3e-70 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LPJOGGEA_01345 1.5e-228 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LPJOGGEA_01346 5.8e-138 ykuT M mechanosensitive ion channel
LPJOGGEA_01347 5.9e-88 sigH K DNA-templated transcription, initiation
LPJOGGEA_01348 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
LPJOGGEA_01349 3.8e-91 panT S Psort location CytoplasmicMembrane, score
LPJOGGEA_01350 1e-91 panT S ECF transporter, substrate-specific component
LPJOGGEA_01351 3.3e-92 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LPJOGGEA_01352 1e-114 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
LPJOGGEA_01353 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
LPJOGGEA_01354 9.4e-121 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LPJOGGEA_01355 8.3e-236 T PhoQ Sensor
LPJOGGEA_01358 1.2e-115 V ATPases associated with a variety of cellular activities
LPJOGGEA_01359 7.2e-119
LPJOGGEA_01360 8.8e-232 2.7.13.3 T GHKL domain
LPJOGGEA_01361 8.2e-134 agrA KT Response regulator of the LytR AlgR family
LPJOGGEA_01364 9.5e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LPJOGGEA_01365 4.2e-86 usp 3.5.1.28 CBM50 S CHAP domain
LPJOGGEA_01366 2.8e-80 mreD M rod shape-determining protein MreD
LPJOGGEA_01367 1.2e-106 mreC M Involved in formation and maintenance of cell shape
LPJOGGEA_01369 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LPJOGGEA_01370 3.3e-166 metF 1.5.1.20 E reductase
LPJOGGEA_01371 4.6e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
LPJOGGEA_01372 5.6e-147 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
LPJOGGEA_01374 8.1e-80 3.4.21.89 S RDD family
LPJOGGEA_01375 1.5e-153 K sequence-specific DNA binding
LPJOGGEA_01376 1.9e-150 V ABC transporter, ATP-binding protein
LPJOGGEA_01377 4e-93 S ABC-2 family transporter protein
LPJOGGEA_01378 2.3e-162 K sequence-specific DNA binding
LPJOGGEA_01379 1.3e-48
LPJOGGEA_01380 2.2e-22
LPJOGGEA_01382 1.8e-87
LPJOGGEA_01383 2.8e-117
LPJOGGEA_01384 1.3e-100 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LPJOGGEA_01385 3.5e-186 desK 2.7.13.3 T Histidine kinase
LPJOGGEA_01386 1.7e-131 yvfS V ABC-2 type transporter
LPJOGGEA_01387 1.2e-155 XK27_09825 V 'abc transporter, ATP-binding protein
LPJOGGEA_01390 5.1e-165 yocS S Transporter
LPJOGGEA_01391 5.8e-82 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
LPJOGGEA_01392 1e-115 yvfS V Transporter
LPJOGGEA_01393 1.1e-153 XK27_09825 V abc transporter atp-binding protein
LPJOGGEA_01394 1.6e-14 liaI KT membrane
LPJOGGEA_01395 6.8e-31 liaI KT membrane
LPJOGGEA_01396 1.4e-92 XK27_05000 S metal cluster binding
LPJOGGEA_01397 0.0 V ABC transporter (permease)
LPJOGGEA_01398 2.1e-132 macB2 V ABC transporter, ATP-binding protein
LPJOGGEA_01399 9.3e-162 T Histidine kinase
LPJOGGEA_01400 2e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LPJOGGEA_01401 6.7e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LPJOGGEA_01402 1.6e-222 pbuX F xanthine permease
LPJOGGEA_01403 6.8e-61 pdxH S pyridoxamine 5'-phosphate oxidase
LPJOGGEA_01404 2.9e-274 V (ABC) transporter
LPJOGGEA_01405 2.6e-152 K sequence-specific DNA binding
LPJOGGEA_01406 8.7e-243 norM V Multidrug efflux pump
LPJOGGEA_01408 3.3e-180 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LPJOGGEA_01409 1.3e-230 brnQ E Component of the transport system for branched-chain amino acids
LPJOGGEA_01410 2.3e-181 manA 5.3.1.8 G mannose-6-phosphate isomerase
LPJOGGEA_01411 1.8e-59 S Protein of unknown function (DUF3290)
LPJOGGEA_01412 7.3e-107 S Protein of unknown function (DUF421)
LPJOGGEA_01413 1.9e-18 csbD K CsbD-like
LPJOGGEA_01414 3.1e-119 S Carbohydrate-binding domain-containing protein Cthe_2159
LPJOGGEA_01415 3e-51 XK27_01300 S ASCH
LPJOGGEA_01416 2.1e-215 yfnA E amino acid
LPJOGGEA_01417 0.0 S dextransucrase activity
LPJOGGEA_01418 1e-81 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
LPJOGGEA_01419 8.4e-38 yjgN S membrane
LPJOGGEA_01420 1.5e-42 S Sugar efflux transporter for intercellular exchange
LPJOGGEA_01421 2.4e-201 P FtsX-like permease family
LPJOGGEA_01422 8.6e-122 V abc transporter atp-binding protein
LPJOGGEA_01423 1.8e-96 K WHG domain
LPJOGGEA_01424 9.4e-172 ydhF S Aldo keto reductase
LPJOGGEA_01425 4.2e-212 natB CP ABC-type Na efflux pump, permease component
LPJOGGEA_01426 3.3e-161 natA S abc transporter atp-binding protein
LPJOGGEA_01428 1.1e-27 XK27_07105 K transcriptional
LPJOGGEA_01429 2.2e-32
LPJOGGEA_01430 5.7e-109 XK27_02070 S nitroreductase
LPJOGGEA_01431 4e-148 1.13.11.2 S glyoxalase
LPJOGGEA_01432 2.2e-73 ywnA K Transcriptional regulator
LPJOGGEA_01433 4.1e-153 E Alpha/beta hydrolase of unknown function (DUF915)
LPJOGGEA_01434 8.4e-227 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LPJOGGEA_01435 3.7e-168 bcrA V abc transporter atp-binding protein
LPJOGGEA_01436 1.6e-124 S ABC-2 family transporter protein
LPJOGGEA_01437 2.6e-91 S Psort location Cytoplasmic, score
LPJOGGEA_01438 2.2e-130 T PhoQ Sensor
LPJOGGEA_01439 9e-119 T Xre family transcriptional regulator
LPJOGGEA_01440 1.2e-109 drgA C nitroreductase
LPJOGGEA_01441 6.3e-104 yoaK S Protein of unknown function (DUF1275)
LPJOGGEA_01442 4e-40 DJ nuclease activity
LPJOGGEA_01443 1.9e-30 XK27_10490
LPJOGGEA_01444 1.7e-156 yvgN C reductase
LPJOGGEA_01445 8.9e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LPJOGGEA_01446 2.2e-239 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
LPJOGGEA_01447 2.4e-220 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LPJOGGEA_01448 2e-146 galR K Transcriptional regulator
LPJOGGEA_01449 4.8e-304 dexB 3.2.1.10, 3.2.1.70 GH13 G COG0366 Glycosidases
LPJOGGEA_01450 8.7e-196 gtfA 2.4.1.329, 2.4.1.7 GH13 G Alpha amylase, catalytic domain
LPJOGGEA_01451 1.6e-97 iolC 2.7.1.4 G pfkB family carbohydrate kinase
LPJOGGEA_01452 3e-188 msmX P Belongs to the ABC transporter superfamily
LPJOGGEA_01453 1.3e-143 msmG P ABC-type sugar transport system, permease component
LPJOGGEA_01454 2.7e-144 msmF P Binding-protein-dependent transport system inner membrane component
LPJOGGEA_01455 1.8e-194 msmE G Bacterial extracellular solute-binding protein
LPJOGGEA_01456 0.0 rafA 3.2.1.22 G alpha-galactosidase
LPJOGGEA_01457 1.1e-144 msmR K AraC family transcriptional regulator
LPJOGGEA_01458 6e-18 dexB 3.2.1.10, 3.2.1.70 GH13 G COG0366 Glycosidases
LPJOGGEA_01459 2.5e-283 XK27_07020 S Belongs to the UPF0371 family
LPJOGGEA_01461 1.3e-232 L DNA binding domain of tn916 integrase
LPJOGGEA_01462 1.8e-30 xis S Excisionase from transposon Tn916
LPJOGGEA_01463 9.3e-36 S Helix-turn-helix domain
LPJOGGEA_01464 1.1e-71 phyR K Sigma-70, region 4
LPJOGGEA_01465 3.9e-37 K Helix-turn-helix domain
LPJOGGEA_01466 0.0 L Transposase and inactivated derivatives, TnpA family
LPJOGGEA_01467 5.6e-95 L Resolvase, N terminal domain
LPJOGGEA_01468 1.6e-16
LPJOGGEA_01469 1.6e-134 ksgA 2.1.1.182, 2.1.1.184 J Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
LPJOGGEA_01470 0.0 tetP J elongation factor G
LPJOGGEA_01471 4.8e-168 S Conjugative transposon protein TcpC
LPJOGGEA_01472 2.2e-190 yddH M NlpC p60 family protein
LPJOGGEA_01473 0.0 S the current gene model (or a revised gene model) may contain a frame shift
LPJOGGEA_01474 0.0 S AAA-like domain
LPJOGGEA_01475 3.8e-90 S TcpE family
LPJOGGEA_01476 7.5e-91 S Antirestriction protein (ArdA)
LPJOGGEA_01477 1.9e-30 S Psort location CytoplasmicMembrane, score
LPJOGGEA_01478 1.6e-232 K Replication initiation factor
LPJOGGEA_01479 3.7e-265 D Domain of unknown function DUF87
LPJOGGEA_01480 1e-63 S Bacterial protein of unknown function (DUF961)
LPJOGGEA_01481 2.3e-53 S Bacterial protein of unknown function (DUF961)
LPJOGGEA_01482 1.3e-160 BP1961 P oxidoreductase
LPJOGGEA_01483 1.2e-32 BP1961 P oxidoreductase
LPJOGGEA_01484 5.3e-181 XK27_10475 S oxidoreductase
LPJOGGEA_01485 2.2e-58 dhaM 2.7.1.121 S dihydroxyacetone kinase, phosphotransfer subunit
LPJOGGEA_01486 1.7e-94 dhaL 2.7.1.121 S Dihydroxyacetone kinase
LPJOGGEA_01487 1.1e-178 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dihydroxyacetone kinase
LPJOGGEA_01488 9.7e-228 thrE K Psort location CytoplasmicMembrane, score
LPJOGGEA_01489 0.0 M Putative cell wall binding repeat
LPJOGGEA_01490 2.4e-34 S Immunity protein 41
LPJOGGEA_01491 2.4e-08 S Enterocin A Immunity
LPJOGGEA_01492 9.8e-194 mccF V LD-carboxypeptidase
LPJOGGEA_01493 9.4e-16 S integral membrane protein
LPJOGGEA_01494 1.1e-43 czrA K helix_turn_helix, Arsenical Resistance Operon Repressor
LPJOGGEA_01495 3.2e-114 yhfC S Putative membrane peptidase family (DUF2324)
LPJOGGEA_01496 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
LPJOGGEA_01498 5.2e-252 S dextransucrase activity
LPJOGGEA_01499 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
LPJOGGEA_01500 0.0 S dextransucrase activity
LPJOGGEA_01501 5.5e-32 M Putative cell wall binding repeat
LPJOGGEA_01502 8.7e-79 S dextransucrase activity
LPJOGGEA_01503 1.1e-20 S dextransucrase activity
LPJOGGEA_01504 1e-105 S Domain of unknown function (DUF1803)
LPJOGGEA_01505 4.6e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
LPJOGGEA_01506 2.1e-64 glnQ 3.6.3.21 E abc transporter atp-binding protein
LPJOGGEA_01507 5.4e-142 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
LPJOGGEA_01508 6.6e-52 L Transposase (IS116 IS110 IS902 family)
LPJOGGEA_01509 4.2e-141 L PFAM transposase IS116 IS110 IS902 family
LPJOGGEA_01510 3.9e-47 gltJ P ABC transporter (Permease
LPJOGGEA_01511 8.8e-115 L the current gene model (or a revised gene model) may contain a frame shift
LPJOGGEA_01521 8.8e-65 L COG1943 Transposase and inactivated derivatives
LPJOGGEA_01522 3.9e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
LPJOGGEA_01523 7.9e-68 L Transposase
LPJOGGEA_01524 3.3e-80 L Transposase
LPJOGGEA_01525 8.5e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LPJOGGEA_01526 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LPJOGGEA_01527 2.2e-34 nrdH O Glutaredoxin
LPJOGGEA_01528 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LPJOGGEA_01529 7.4e-211 citZ 2.3.3.1 C Belongs to the citrate synthase family
LPJOGGEA_01530 6.3e-221 icd 1.1.1.42 C Isocitrate dehydrogenase
LPJOGGEA_01531 3e-38 ptsH G phosphocarrier protein Hpr
LPJOGGEA_01532 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LPJOGGEA_01533 1.5e-264 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
LPJOGGEA_01534 6.1e-162 XK27_05670 S Putative esterase
LPJOGGEA_01535 1.8e-152 XK27_05675 S Esterase
LPJOGGEA_01536 1.9e-225 XK27_05680 6.3.2.2, 6.3.2.4 M carbamoylphosphate synthase large subunit
LPJOGGEA_01537 4.8e-175 yfmL 3.6.4.13 L DEAD DEAH box helicase
LPJOGGEA_01538 3.1e-113 udk 2.7.1.48 F Cytidine monophosphokinase
LPJOGGEA_01539 0.0 uup S abc transporter atp-binding protein
LPJOGGEA_01540 1.6e-39 MA20_06245 S yiaA/B two helix domain
LPJOGGEA_01541 9.7e-132 pip 1.11.1.10 S Alpha beta hydrolase
LPJOGGEA_01542 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LPJOGGEA_01543 2.3e-150 cobQ S glutamine amidotransferase
LPJOGGEA_01544 5.8e-255 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
LPJOGGEA_01545 8.8e-148 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LPJOGGEA_01546 1.9e-162 ybbR S Protein conserved in bacteria
LPJOGGEA_01547 2.8e-249 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LPJOGGEA_01548 5.4e-66 gtrA S GtrA-like protein
LPJOGGEA_01551 7.8e-12
LPJOGGEA_01553 4.5e-109 T Virulence-associated protein E
LPJOGGEA_01554 4e-140 KL Phage plasmid primase P4 family
LPJOGGEA_01555 7.7e-21
LPJOGGEA_01556 5.5e-15
LPJOGGEA_01560 1e-19 K sequence-specific DNA binding
LPJOGGEA_01561 7.2e-13 K Cro/C1-type HTH DNA-binding domain
LPJOGGEA_01562 1.8e-188 sip L Belongs to the 'phage' integrase family
LPJOGGEA_01563 4.8e-120 trmK 2.1.1.217 S SAM-dependent methyltransferase
LPJOGGEA_01564 8.4e-145 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LPJOGGEA_01565 2.5e-76 zupT P Mediates zinc uptake. May also transport other divalent cations
LPJOGGEA_01566 3.7e-52 zupT P Mediates zinc uptake. May also transport other divalent cations
LPJOGGEA_01567 8.2e-199 yurR 1.4.5.1 E oxidoreductase
LPJOGGEA_01568 1.5e-258 S phospholipase Carboxylesterase
LPJOGGEA_01569 2.4e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LPJOGGEA_01570 2.7e-111 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
LPJOGGEA_01571 4.8e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LPJOGGEA_01573 5.8e-31 KT response to antibiotic
LPJOGGEA_01575 3.1e-217 hemN H Involved in the biosynthesis of porphyrin-containing compound
LPJOGGEA_01576 1.7e-139 fat 3.1.2.21 I Acyl-ACP thioesterase
LPJOGGEA_01577 5.2e-139 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LPJOGGEA_01578 1.9e-118 ylfI S tigr01906
LPJOGGEA_01579 1.2e-137 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
LPJOGGEA_01580 8e-147 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
LPJOGGEA_01581 1.1e-60 XK27_08085
LPJOGGEA_01582 1.9e-192 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LPJOGGEA_01583 4.2e-178 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
LPJOGGEA_01584 5.5e-118 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
LPJOGGEA_01585 1.2e-233 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LPJOGGEA_01586 5.1e-107 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
LPJOGGEA_01587 2.3e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LPJOGGEA_01588 5.3e-130 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LPJOGGEA_01589 1.1e-136 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LPJOGGEA_01590 3.6e-60 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LPJOGGEA_01591 4.1e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
LPJOGGEA_01593 2e-94 XK27_05505 S Psort location CytoplasmicMembrane, score
LPJOGGEA_01594 2e-143 P molecular chaperone
LPJOGGEA_01595 1.9e-98 S Carbohydrate-binding domain-containing protein Cthe_2159
LPJOGGEA_01596 1.5e-178 XK27_08075 M glycosyl transferase family 2
LPJOGGEA_01597 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
LPJOGGEA_01598 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
LPJOGGEA_01599 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
LPJOGGEA_01600 1.1e-232 rodA D Belongs to the SEDS family
LPJOGGEA_01601 2.7e-222 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LPJOGGEA_01602 4.9e-111 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
LPJOGGEA_01603 2.9e-173 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LPJOGGEA_01604 3.1e-136 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LPJOGGEA_01605 6.1e-67 GnaT 2.5.1.16 K acetyltransferase
LPJOGGEA_01606 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
LPJOGGEA_01607 1.7e-93 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LPJOGGEA_01608 5.6e-180 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LPJOGGEA_01609 4.2e-124 dnaD
LPJOGGEA_01610 1e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LPJOGGEA_01611 7.9e-07 KT response to antibiotic
LPJOGGEA_01612 6.8e-232 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LPJOGGEA_01613 4.6e-29 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LPJOGGEA_01614 2.8e-157 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LPJOGGEA_01615 7.7e-149 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LPJOGGEA_01616 2.8e-73 argR K Regulates arginine biosynthesis genes
LPJOGGEA_01617 1.8e-301 recN L May be involved in recombinational repair of damaged DNA
LPJOGGEA_01618 5.8e-144 DegV S DegV family
LPJOGGEA_01619 3.9e-159 ypmR E COG2755 Lysophospholipase L1 and related esterases
LPJOGGEA_01620 1.8e-96 ypmS S Protein conserved in bacteria
LPJOGGEA_01621 6.3e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LPJOGGEA_01623 6.2e-179 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
LPJOGGEA_01624 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LPJOGGEA_01625 4.9e-290 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LPJOGGEA_01626 6.6e-190 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
LPJOGGEA_01627 3.5e-37 ysdA L Membrane
LPJOGGEA_01628 5.6e-277 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LPJOGGEA_01629 1.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LPJOGGEA_01630 0.0 dnaE 2.7.7.7 L DNA polymerase
LPJOGGEA_01631 4.6e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LPJOGGEA_01632 6e-277 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
LPJOGGEA_01633 4.8e-31 L COG1943 Transposase and inactivated derivatives
LPJOGGEA_01634 2.9e-18 S Domain of unknown function (DUF4649)
LPJOGGEA_01635 1.4e-176 XK27_08835 S ABC transporter substrate binding protein
LPJOGGEA_01636 2.6e-147 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
LPJOGGEA_01637 1.5e-135 XK27_08845 S abc transporter atp-binding protein
LPJOGGEA_01638 2.8e-310 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LPJOGGEA_01639 2.5e-149 estA CE1 S Esterase
LPJOGGEA_01640 1.6e-126 XK27_08875 O Zinc-dependent metalloprotease
LPJOGGEA_01641 9.8e-19 XK27_08880
LPJOGGEA_01642 1e-75 fld C Flavodoxin
LPJOGGEA_01643 7.8e-280 clcA P Chloride transporter, ClC family
LPJOGGEA_01644 4.3e-40 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
LPJOGGEA_01645 5e-213 XK27_05110 P Chloride transporter ClC family
LPJOGGEA_01646 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LPJOGGEA_01648 8.3e-73 S Phage integrase family
LPJOGGEA_01649 2.5e-103 K cell adhesion
LPJOGGEA_01650 1.2e-18 S YjcQ protein
LPJOGGEA_01651 3.2e-15
LPJOGGEA_01653 6.5e-21 WQ51_02665 S Protein of unknown function (DUF3042)
LPJOGGEA_01654 1.6e-160 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LPJOGGEA_01655 1.5e-86 ytsP 1.8.4.14 T GAF domain-containing protein
LPJOGGEA_01656 2.6e-305 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LPJOGGEA_01657 1.2e-174 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LPJOGGEA_01658 4.6e-211 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LPJOGGEA_01661 2.6e-10
LPJOGGEA_01664 1.2e-21 glgE 2.3.1.12, 2.4.99.16, 3.2.1.1, 3.2.1.14 GH13,GH18 M Pilin isopeptide linkage domain protein
LPJOGGEA_01665 4.1e-188 XK27_10075 S abc transporter atp-binding protein
LPJOGGEA_01666 0.0 V abc transporter atp-binding protein
LPJOGGEA_01667 2.6e-295 V abc transporter atp-binding protein
LPJOGGEA_01668 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
LPJOGGEA_01670 2.8e-285 S Protein of unknown function (DUF3114)
LPJOGGEA_01671 4.9e-99 2.3.1.128 K Acetyltransferase GNAT Family
LPJOGGEA_01672 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LPJOGGEA_01673 1.6e-282 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
LPJOGGEA_01674 9.8e-179 glgD 2.4.1.21, 2.7.7.27 GT5 G glucose-1-phosphate adenylyltransferase
LPJOGGEA_01675 5.8e-187 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LPJOGGEA_01676 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LPJOGGEA_01677 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LPJOGGEA_01678 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
LPJOGGEA_01679 1.2e-188 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
LPJOGGEA_01680 1.9e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LPJOGGEA_01681 7.6e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LPJOGGEA_01684 1.4e-113 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LPJOGGEA_01685 3.9e-171 vraS 2.7.13.3 T Histidine kinase
LPJOGGEA_01686 3.3e-116 yvqF S Membrane
LPJOGGEA_01687 4.3e-77 kcsA P Ion transport protein
LPJOGGEA_01688 3.9e-17 kcsA P Ion transport protein
LPJOGGEA_01689 1.9e-288 prkC 2.7.11.1 KLT serine threonine protein kinase
LPJOGGEA_01690 4.8e-137 stp 3.1.3.16 T phosphatase
LPJOGGEA_01691 2.8e-241 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LPJOGGEA_01692 1.1e-170 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LPJOGGEA_01693 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LPJOGGEA_01694 3.6e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
LPJOGGEA_01695 5.7e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
LPJOGGEA_01696 1.8e-195 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LPJOGGEA_01697 1.3e-145 XK27_02985 S overlaps another CDS with the same product name
LPJOGGEA_01698 7.6e-146 supH S overlaps another CDS with the same product name
LPJOGGEA_01699 7.3e-62 yvoA_1 K Transcriptional
LPJOGGEA_01700 1.1e-116 skfE V abc transporter atp-binding protein
LPJOGGEA_01701 1.3e-129 V Psort location CytoplasmicMembrane, score
LPJOGGEA_01702 9.5e-172 oppF P Belongs to the ABC transporter superfamily
LPJOGGEA_01703 4.2e-203 oppD P Belongs to the ABC transporter superfamily
LPJOGGEA_01704 1e-165 amiD P ABC transporter (Permease
LPJOGGEA_01705 2.1e-277 amiC P ABC transporter (Permease
LPJOGGEA_01706 5.3e-305 amiA E ABC transporter, substrate-binding protein, family 5
LPJOGGEA_01707 0.0 amiA E ABC transporter, substrate-binding protein, family 5
LPJOGGEA_01708 2e-180 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LPJOGGEA_01709 1.7e-170 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
LPJOGGEA_01710 7.5e-152 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LPJOGGEA_01711 4.6e-120 yjbM 2.7.6.5 S Gtp pyrophosphokinase
LPJOGGEA_01712 7.1e-101 yjbK S Adenylate cyclase
LPJOGGEA_01713 8.7e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LPJOGGEA_01714 9.5e-203 iscS 2.8.1.7 E Cysteine desulfurase
LPJOGGEA_01715 8.2e-60 XK27_04120 S Putative amino acid metabolism
LPJOGGEA_01716 2.1e-117 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LPJOGGEA_01717 2.4e-127 puuD T peptidase C26
LPJOGGEA_01718 1.8e-114 radC E Belongs to the UPF0758 family
LPJOGGEA_01719 1.8e-298 rgpF M Rhamnan synthesis protein F
LPJOGGEA_01720 3.1e-223 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
LPJOGGEA_01721 6.8e-142 rgpC GM Transport permease protein
LPJOGGEA_01722 1.9e-175 rgpB GT2 M Glycosyltransferase, group 2 family protein
LPJOGGEA_01723 1.6e-224 rgpA GT4 M Domain of unknown function (DUF1972)
LPJOGGEA_01724 4.4e-259 S Glucosyl transferase GtrII
LPJOGGEA_01725 1.2e-235 GT4 M transferase activity, transferring glycosyl groups
LPJOGGEA_01726 2.7e-222 M Psort location CytoplasmicMembrane, score
LPJOGGEA_01727 0.0 rgpF GT2,GT4 M Glycosyltransferase like family 2
LPJOGGEA_01728 2.2e-153 2.4.1.60 S Glycosyltransferase group 2 family protein
LPJOGGEA_01729 1.8e-46 S Uncharacterized conserved protein (DUF2304)
LPJOGGEA_01730 3.5e-126 arnC M group 2 family protein
LPJOGGEA_01731 1.1e-178 M Glycosyltransferase group 2 family protein
LPJOGGEA_01732 9.3e-226 amrA S membrane protein involved in the export of O-antigen and teichoic acid
LPJOGGEA_01733 1.7e-159 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LPJOGGEA_01734 6.2e-250 S Glucosyl transferase GtrII
LPJOGGEA_01735 1.2e-171 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
LPJOGGEA_01736 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
LPJOGGEA_01737 2.3e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LPJOGGEA_01738 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LPJOGGEA_01739 9.8e-51 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LPJOGGEA_01740 3.2e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
LPJOGGEA_01741 1.9e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
LPJOGGEA_01742 2.5e-211 arcT 2.6.1.1 E Aminotransferase
LPJOGGEA_01743 5.9e-138 ET Belongs to the bacterial solute-binding protein 3 family
LPJOGGEA_01744 1.9e-139 ET ABC transporter
LPJOGGEA_01745 1.4e-83 mutT 3.6.1.55 F Nudix family
LPJOGGEA_01746 1.1e-06
LPJOGGEA_01747 1.3e-20 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LPJOGGEA_01748 1.2e-114 ycaK 1.6.5.2 S NADPH-dependent FMN reductase
LPJOGGEA_01749 9.2e-89 MA20_25245 K Gnat family
LPJOGGEA_01750 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LPJOGGEA_01752 3.8e-168 S CAAX amino terminal protease family protein
LPJOGGEA_01753 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
LPJOGGEA_01754 1e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
LPJOGGEA_01755 1.7e-17 XK27_00735
LPJOGGEA_01756 6.7e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LPJOGGEA_01758 1.3e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LPJOGGEA_01759 5.7e-10 O ADP-ribosylglycohydrolase
LPJOGGEA_01760 1.9e-62 paaI Q protein possibly involved in aromatic compounds catabolism
LPJOGGEA_01761 2.7e-61 ycaO O OsmC-like protein
LPJOGGEA_01763 4.7e-152 EG Permeases of the drug metabolite transporter (DMT) superfamily
LPJOGGEA_01764 1.9e-07 N PFAM Uncharacterised protein family UPF0150
LPJOGGEA_01765 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LPJOGGEA_01766 2e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LPJOGGEA_01767 7.2e-239 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LPJOGGEA_01768 2e-236 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
LPJOGGEA_01770 3e-60 divIC D Septum formation initiator
LPJOGGEA_01771 2.2e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
LPJOGGEA_01772 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LPJOGGEA_01773 2.6e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LPJOGGEA_01774 1.1e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LPJOGGEA_01775 1.1e-29 yyzM S Protein conserved in bacteria
LPJOGGEA_01776 1.6e-197 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LPJOGGEA_01777 1.2e-255 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LPJOGGEA_01778 1e-134 parB K Belongs to the ParB family
LPJOGGEA_01779 4.6e-206 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
LPJOGGEA_01780 8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LPJOGGEA_01781 1.5e-118 yoaK S Protein of unknown function (DUF1275)
LPJOGGEA_01785 0.0 XK27_10405 S Bacterial membrane protein YfhO
LPJOGGEA_01786 5.1e-306 ybiT S abc transporter atp-binding protein
LPJOGGEA_01787 2.2e-154 yvjA S membrane
LPJOGGEA_01788 7e-192 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
LPJOGGEA_01789 5.6e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
LPJOGGEA_01790 1e-204 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LPJOGGEA_01791 8.9e-60 yaaA S S4 domain protein YaaA
LPJOGGEA_01792 4.8e-235 ymfF S Peptidase M16
LPJOGGEA_01793 1.6e-241 ymfH S Peptidase M16
LPJOGGEA_01794 1.2e-133 S sequence-specific DNA binding
LPJOGGEA_01795 4.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LPJOGGEA_01796 1.3e-151 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LPJOGGEA_01797 4.7e-154 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LPJOGGEA_01798 2.8e-132 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LPJOGGEA_01799 3.5e-60 lytE M LysM domain protein
LPJOGGEA_01800 2.4e-63 isaA GH23 M Immunodominant staphylococcal antigen A
LPJOGGEA_01801 0.0 S Bacterial membrane protein, YfhO
LPJOGGEA_01802 9.6e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LPJOGGEA_01803 2.4e-99 yvbG U UPF0056 membrane protein
LPJOGGEA_01804 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LPJOGGEA_01805 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
LPJOGGEA_01806 2.2e-73 rplI J binds to the 23S rRNA
LPJOGGEA_01807 1e-246 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LPJOGGEA_01808 1.8e-47 veg S Biofilm formation stimulator VEG
LPJOGGEA_01809 5.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LPJOGGEA_01810 1.9e-10
LPJOGGEA_01811 4.1e-54 ypaA M Membrane
LPJOGGEA_01812 9.9e-97 XK27_06935 K transcriptional regulator
LPJOGGEA_01813 7.3e-160 XK27_06930 V domain protein
LPJOGGEA_01814 5.2e-108 S Putative adhesin
LPJOGGEA_01815 2e-63 XK27_06920 S Protein of unknown function (DUF1700)
LPJOGGEA_01816 6.3e-54 K transcriptional regulator, PadR family
LPJOGGEA_01817 1.5e-117 nudL L hydrolase
LPJOGGEA_01822 2e-285 K transcriptional regulator containing an HTH domain and an
LPJOGGEA_01823 1.2e-65
LPJOGGEA_01825 2.6e-13
LPJOGGEA_01826 2.2e-62
LPJOGGEA_01827 4.1e-200 L Replication initiation factor
LPJOGGEA_01829 1.6e-277 L DNA integration
LPJOGGEA_01830 2e-231
LPJOGGEA_01831 8.8e-128 P ATPases associated with a variety of cellular activities
LPJOGGEA_01832 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LPJOGGEA_01833 1.5e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LPJOGGEA_01834 1.5e-219 metE 2.1.1.14 E Methionine synthase
LPJOGGEA_01835 7.7e-239 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
LPJOGGEA_01836 7.3e-239 hisS 6.1.1.21 J histidyl-tRNA synthetase
LPJOGGEA_01838 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
LPJOGGEA_01839 3.2e-167 XK27_01785 S cog cog1284
LPJOGGEA_01840 5.5e-124 yaaA S Belongs to the UPF0246 family
LPJOGGEA_01841 8.2e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LPJOGGEA_01842 3.5e-88 XK27_10930 K acetyltransferase
LPJOGGEA_01843 7.5e-14
LPJOGGEA_01844 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
LPJOGGEA_01845 3.7e-296 ccs S the current gene model (or a revised gene model) may contain a frame shift
LPJOGGEA_01846 3.2e-44 yrzB S Belongs to the UPF0473 family
LPJOGGEA_01847 2.3e-69 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LPJOGGEA_01848 6.3e-44 yrzL S Belongs to the UPF0297 family
LPJOGGEA_01849 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
LPJOGGEA_01850 3.7e-235 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
LPJOGGEA_01852 1.6e-184 int L Belongs to the 'phage' integrase family
LPJOGGEA_01853 2.5e-18 S Domain of unknown function (DUF3173)
LPJOGGEA_01854 2.1e-137 L Replication initiation factor
LPJOGGEA_01855 1.5e-70 K TRANSCRIPTIONal
LPJOGGEA_01857 6.3e-121 S Psort location CytoplasmicMembrane, score
LPJOGGEA_01858 8e-131 yxlF V ABC transporter
LPJOGGEA_01859 1.2e-26 S Phospholipase_D-nuclease N-terminal
LPJOGGEA_01861 2.6e-91 adk 2.7.4.3 F topology modulation protein
LPJOGGEA_01862 3e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LPJOGGEA_01863 2.2e-78 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LPJOGGEA_01864 4.8e-35 XK27_09805 S MORN repeat protein
LPJOGGEA_01865 0.0 XK27_09800 I Acyltransferase
LPJOGGEA_01870 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LPJOGGEA_01871 1.7e-84 yxjI S LURP-one-related
LPJOGGEA_01872 7.8e-168 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
LPJOGGEA_01873 6.1e-120 yrrM 2.1.1.104 S O-Methyltransferase
LPJOGGEA_01874 4.5e-214 oxlT P COG0477 Permeases of the major facilitator superfamily
LPJOGGEA_01875 0.0 pepF E oligoendopeptidase F
LPJOGGEA_01876 4.8e-179 coiA 3.6.4.12 S Competence protein
LPJOGGEA_01877 3.4e-32 L transposition
LPJOGGEA_01878 5.9e-23 insK L Integrase core domain protein
LPJOGGEA_01879 1.6e-22 L overlaps another CDS with the same product name
LPJOGGEA_01880 1.5e-160 S CHAP domain
LPJOGGEA_01881 1.3e-303 S Glucan-binding protein C
LPJOGGEA_01882 1.7e-105 S CAAX amino terminal protease family protein
LPJOGGEA_01883 6.1e-168 K transcriptional regulator (lysR family)
LPJOGGEA_01884 3.1e-161 S reductase
LPJOGGEA_01885 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LPJOGGEA_01889 2.4e-187 phoH T phosphate starvation-inducible protein PhoH
LPJOGGEA_01890 6.7e-128 sip M LysM domain protein
LPJOGGEA_01891 3.7e-34 yozE S Belongs to the UPF0346 family
LPJOGGEA_01892 8.5e-159 cvfB S Protein conserved in bacteria
LPJOGGEA_01893 1.7e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LPJOGGEA_01894 1.7e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LPJOGGEA_01895 3.6e-219 sptS 2.7.13.3 T Histidine kinase
LPJOGGEA_01896 4.4e-118 T response regulator
LPJOGGEA_01897 5.7e-112 2.7.6.5 S Region found in RelA / SpoT proteins
LPJOGGEA_01898 3e-113 K Acetyltransferase (GNAT) family
LPJOGGEA_01899 0.0 lmrA2 V abc transporter atp-binding protein
LPJOGGEA_01900 4.2e-309 lmrA1 V abc transporter atp-binding protein
LPJOGGEA_01901 1.3e-73 K DNA-binding transcription factor activity
LPJOGGEA_01902 7.9e-70 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LPJOGGEA_01903 6.6e-285 S Psort location CytoplasmicMembrane, score
LPJOGGEA_01904 1.5e-255 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
LPJOGGEA_01905 2.1e-202 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
LPJOGGEA_01906 3.7e-129 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
LPJOGGEA_01907 1.3e-26 U response to pH
LPJOGGEA_01908 0.0 yfmR S abc transporter atp-binding protein
LPJOGGEA_01909 5.4e-220 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LPJOGGEA_01910 9.7e-138 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LPJOGGEA_01911 1.4e-150 XK27_08360 S EDD domain protein, DegV family
LPJOGGEA_01912 5e-63 WQ51_03320 S cog cog4835
LPJOGGEA_01913 4.5e-134 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LPJOGGEA_01914 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
LPJOGGEA_01915 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
LPJOGGEA_01916 7.1e-95 2.3.1.128 K acetyltransferase
LPJOGGEA_01917 2.8e-254 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
LPJOGGEA_01918 8.7e-292 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
LPJOGGEA_01919 2.8e-224 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LPJOGGEA_01920 1.5e-211 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
LPJOGGEA_01922 1.2e-227 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LPJOGGEA_01923 4.6e-260 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LPJOGGEA_01924 0.0 fruA 2.7.1.202 G phosphotransferase system
LPJOGGEA_01925 7.6e-166 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
LPJOGGEA_01926 4e-112 fruR K transcriptional
LPJOGGEA_01927 7.1e-207 rny D Endoribonuclease that initiates mRNA decay
LPJOGGEA_01928 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LPJOGGEA_01929 2e-138 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
LPJOGGEA_01930 5e-159 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LPJOGGEA_01931 4.1e-256 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
LPJOGGEA_01932 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
LPJOGGEA_01933 5.6e-54 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LPJOGGEA_01934 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LPJOGGEA_01935 1.8e-125 IQ reductase
LPJOGGEA_01936 6.7e-162 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
LPJOGGEA_01937 2e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
LPJOGGEA_01938 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LPJOGGEA_01939 1.7e-168 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LPJOGGEA_01940 5.2e-72 marR K Transcriptional regulator, MarR family
LPJOGGEA_01941 2.1e-140 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
LPJOGGEA_01942 2.8e-114 S HAD hydrolase, family IA, variant 3
LPJOGGEA_01943 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
LPJOGGEA_01944 3e-192 asnA 6.3.1.1 E aspartate--ammonia ligase
LPJOGGEA_01945 2.2e-246 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LPJOGGEA_01946 2e-138 recX 2.4.1.337 GT4 S Regulatory protein RecX
LPJOGGEA_01947 7.8e-102 ygaC J Belongs to the UPF0374 family
LPJOGGEA_01952 7e-201 L Belongs to the 'phage' integrase family
LPJOGGEA_01953 3.5e-28 S Domain of unknown function (DUF3173)
LPJOGGEA_01954 2.6e-67
LPJOGGEA_01955 2.5e-225 L Replication initiation factor
LPJOGGEA_01956 3.6e-74
LPJOGGEA_01957 2.8e-76 K transcriptional
LPJOGGEA_01959 7.6e-149
LPJOGGEA_01961 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LPJOGGEA_01962 1.5e-236 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
LPJOGGEA_01963 1.2e-35 XK27_02060 S Transglycosylase associated protein
LPJOGGEA_01964 3.9e-72 badR K Transcriptional regulator, marr family
LPJOGGEA_01965 1.1e-95 S reductase
LPJOGGEA_01967 3.9e-287 ahpF O alkyl hydroperoxide reductase
LPJOGGEA_01968 1.1e-106 ahpC 1.11.1.15 O alkyl hydroperoxide reductase
LPJOGGEA_01969 7.4e-138 rpsB J Belongs to the universal ribosomal protein uS2 family
LPJOGGEA_01970 1e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LPJOGGEA_01971 1.6e-82 S Putative small multi-drug export protein
LPJOGGEA_01972 1.8e-75 ctsR K Belongs to the CtsR family
LPJOGGEA_01973 0.0 clpC O Belongs to the ClpA ClpB family
LPJOGGEA_01974 2e-233 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LPJOGGEA_01975 1.1e-228 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LPJOGGEA_01976 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
LPJOGGEA_01977 1e-139 S SseB protein N-terminal domain
LPJOGGEA_01978 3.3e-112 cysE 2.3.1.30 E serine acetyltransferase
LPJOGGEA_01980 8.1e-257 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
LPJOGGEA_01981 2.7e-67 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LPJOGGEA_01983 9.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LPJOGGEA_01984 2.7e-91 yacP S RNA-binding protein containing a PIN domain
LPJOGGEA_01985 4.1e-153 degV S DegV family
LPJOGGEA_01987 5.1e-22 K Transcriptional
LPJOGGEA_01988 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LPJOGGEA_01989 1.2e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
LPJOGGEA_01990 2.6e-222 int2 L Phage integrase family
LPJOGGEA_01991 1.7e-33 S Helix-turn-helix domain
LPJOGGEA_01992 1.8e-140
LPJOGGEA_01993 6.2e-10 D FtsK/SpoIIIE family
LPJOGGEA_01994 8.5e-47
LPJOGGEA_01996 1.3e-16 3.1.21.3 V type I restriction modification DNA specificity domain
LPJOGGEA_01997 1.7e-101 int2 L Phage integrase family
LPJOGGEA_01998 5.1e-57 int2 L Belongs to the 'phage' integrase family
LPJOGGEA_02000 6.7e-305 V site-specific DNA-methyltransferase (adenine-specific) activity
LPJOGGEA_02001 1.3e-177 L Phage integrase family
LPJOGGEA_02002 1.4e-23
LPJOGGEA_02003 2.1e-183 repB P Belongs to the ABC transporter superfamily
LPJOGGEA_02004 8e-60 D ftsk spoiiie
LPJOGGEA_02009 1.5e-31 K Cro/C1-type HTH DNA-binding domain
LPJOGGEA_02012 9.5e-39 int2 L Phage integrase family
LPJOGGEA_02013 1.4e-97 M1-798 K Rhodanese Homology Domain
LPJOGGEA_02014 1.8e-45 trxA O Belongs to the thioredoxin family
LPJOGGEA_02015 2.2e-157 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LPJOGGEA_02017 6.2e-53 frnE Q DSBA-like thioredoxin domain
LPJOGGEA_02018 1.7e-14 S Protein of unknown function (DUF1211)
LPJOGGEA_02019 2.2e-17
LPJOGGEA_02020 1.5e-29 K Helix-turn-helix domain
LPJOGGEA_02021 6e-85
LPJOGGEA_02022 8.5e-140 srtB 3.4.22.70 S sortase, SrtB family
LPJOGGEA_02023 1.1e-233 capA M Bacterial capsule synthesis protein
LPJOGGEA_02024 6.7e-38 gcvR T UPF0237 protein
LPJOGGEA_02025 2.3e-243 XK27_08635 S UPF0210 protein
LPJOGGEA_02026 1.4e-130 ais G Phosphoglycerate mutase
LPJOGGEA_02027 5.3e-139 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
LPJOGGEA_02028 7.2e-101 acmA 3.2.1.17, 3.4.17.14, 3.5.1.28 NU Muramidase (Flagellum-specific)
LPJOGGEA_02029 8.3e-185 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LPJOGGEA_02030 8.2e-64 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LPJOGGEA_02031 6e-303 dnaK O Heat shock 70 kDa protein
LPJOGGEA_02032 7.5e-104 thiJ-2 3.5.1.124 S DJ-1/PfpI family
LPJOGGEA_02033 8e-189 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LPJOGGEA_02034 1.1e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LPJOGGEA_02035 1.5e-135 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
LPJOGGEA_02036 7.4e-80 hmpT S cog cog4720

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)