ORF_ID e_value Gene_name EC_number CAZy COGs Description
DDAIFOJL_00001 3.9e-159 L Phage integrase family
DDAIFOJL_00002 6.3e-38
DDAIFOJL_00010 3.5e-11
DDAIFOJL_00013 1.8e-09
DDAIFOJL_00015 1.8e-80 L helicase
DDAIFOJL_00016 6.5e-150 recQ 3.6.4.12, 5.99.1.2 F RecQ zinc-binding
DDAIFOJL_00018 1.9e-159 S Fic/DOC family
DDAIFOJL_00019 1e-109 L Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DDAIFOJL_00020 3.8e-40 3.1.21.4 L Restriction endonuclease XhoI
DDAIFOJL_00023 2e-23
DDAIFOJL_00026 4.7e-93 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
DDAIFOJL_00030 1.5e-54 L single-stranded DNA binding
DDAIFOJL_00031 2.8e-76 S Fic/DOC family
DDAIFOJL_00032 1.1e-61
DDAIFOJL_00033 6.6e-07
DDAIFOJL_00034 0.0 traA 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DDAIFOJL_00035 2.3e-32
DDAIFOJL_00036 1e-30 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
DDAIFOJL_00037 9.2e-37 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
DDAIFOJL_00038 6e-14 XK27_08505 D nucleotidyltransferase activity
DDAIFOJL_00040 1e-195 topB 5.99.1.2 L DNA topoisomerase
DDAIFOJL_00042 1.6e-20
DDAIFOJL_00045 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DDAIFOJL_00047 8.9e-76
DDAIFOJL_00048 5.2e-83 pin L Resolvase, N terminal domain
DDAIFOJL_00050 5.5e-255 V N-6 DNA Methylase
DDAIFOJL_00051 4.4e-79 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
DDAIFOJL_00056 3.8e-287 U TraM recognition site of TraD and TraG
DDAIFOJL_00057 5.2e-256 U Type IV secretory pathway, VirB4
DDAIFOJL_00060 7.1e-38 D nuclear chromosome segregation
DDAIFOJL_00061 6.8e-72 M Sortase family
DDAIFOJL_00062 9.2e-106 S Listeria-Bacteroides repeat domain (List_Bact_rpt)
DDAIFOJL_00063 7e-98 M domain protein
DDAIFOJL_00064 0.0 D Cell surface antigen C-terminus
DDAIFOJL_00065 9.5e-55
DDAIFOJL_00067 4.2e-75 S Pfam:CtkA_N
DDAIFOJL_00069 1.4e-103
DDAIFOJL_00070 8.9e-26
DDAIFOJL_00074 7.7e-43
DDAIFOJL_00075 3.2e-206
DDAIFOJL_00076 3e-101
DDAIFOJL_00079 2.3e-156 mltE2 M Bacteriophage peptidoglycan hydrolase
DDAIFOJL_00080 1.8e-121
DDAIFOJL_00081 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
DDAIFOJL_00082 1.1e-83 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DDAIFOJL_00083 1.9e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
DDAIFOJL_00084 5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DDAIFOJL_00086 2.6e-135 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
DDAIFOJL_00087 5.8e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DDAIFOJL_00088 6.1e-177 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
DDAIFOJL_00089 3.2e-225 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
DDAIFOJL_00090 3e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
DDAIFOJL_00091 2.9e-72 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DDAIFOJL_00092 7.1e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DDAIFOJL_00093 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
DDAIFOJL_00094 1e-162 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
DDAIFOJL_00095 4.6e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DDAIFOJL_00096 4.2e-97 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
DDAIFOJL_00097 1.9e-40 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
DDAIFOJL_00098 5.7e-155 hisG 2.4.2.17 F ATP phosphoribosyltransferase
DDAIFOJL_00099 1e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DDAIFOJL_00100 2.6e-172 S Bacterial protein of unknown function (DUF881)
DDAIFOJL_00101 4.2e-45 sbp S Protein of unknown function (DUF1290)
DDAIFOJL_00102 1.6e-141 S Bacterial protein of unknown function (DUF881)
DDAIFOJL_00103 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DDAIFOJL_00104 3.5e-112 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
DDAIFOJL_00105 5.2e-128 yebC K transcriptional regulatory protein
DDAIFOJL_00106 1e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
DDAIFOJL_00107 1e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DDAIFOJL_00108 5.6e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DDAIFOJL_00109 1.8e-50 yajC U Preprotein translocase subunit
DDAIFOJL_00110 1.8e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DDAIFOJL_00111 2.2e-221 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
DDAIFOJL_00112 2.6e-161 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DDAIFOJL_00113 1.8e-246
DDAIFOJL_00114 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
DDAIFOJL_00115 8.2e-34
DDAIFOJL_00116 1.5e-161 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
DDAIFOJL_00117 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DDAIFOJL_00118 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
DDAIFOJL_00119 1.1e-69
DDAIFOJL_00121 1.4e-264 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
DDAIFOJL_00122 0.0 pafB K WYL domain
DDAIFOJL_00123 6.6e-48
DDAIFOJL_00124 0.0 helY L DEAD DEAH box helicase
DDAIFOJL_00125 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
DDAIFOJL_00126 2e-140 pgp 3.1.3.18 S HAD-hyrolase-like
DDAIFOJL_00127 4.6e-61
DDAIFOJL_00128 9.7e-112 K helix_turn_helix, mercury resistance
DDAIFOJL_00129 4.7e-76 garA T Inner membrane component of T3SS, cytoplasmic domain
DDAIFOJL_00130 5.4e-36
DDAIFOJL_00131 2.5e-08
DDAIFOJL_00140 1.6e-156 S PAC2 family
DDAIFOJL_00141 6.9e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
DDAIFOJL_00142 5.1e-158 G Fructosamine kinase
DDAIFOJL_00143 2.4e-188 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DDAIFOJL_00144 1e-196 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DDAIFOJL_00145 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
DDAIFOJL_00146 4.2e-203 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DDAIFOJL_00147 1.3e-113 pnuC H Nicotinamide mononucleotide transporter
DDAIFOJL_00148 7.1e-09 pnuC H Nicotinamide mononucleotide transporter
DDAIFOJL_00149 8e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
DDAIFOJL_00150 3.3e-163 S Sucrose-6F-phosphate phosphohydrolase
DDAIFOJL_00151 2.4e-32 secG U Preprotein translocase SecG subunit
DDAIFOJL_00152 9.6e-149 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DDAIFOJL_00153 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
DDAIFOJL_00154 2.8e-171 whiA K May be required for sporulation
DDAIFOJL_00155 1.1e-170 rapZ S Displays ATPase and GTPase activities
DDAIFOJL_00156 7.1e-183 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
DDAIFOJL_00157 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DDAIFOJL_00158 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DDAIFOJL_00159 1.2e-219 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00160 0.0 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00161 1.8e-139 S Domain of unknown function (DUF4194)
DDAIFOJL_00162 6.9e-274 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00163 2e-13
DDAIFOJL_00165 2.8e-66 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DDAIFOJL_00166 2.3e-110 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
DDAIFOJL_00167 1.9e-300 ybiT S ABC transporter
DDAIFOJL_00168 8.5e-176 S IMP dehydrogenase activity
DDAIFOJL_00169 1e-278 pepC 3.4.22.40 E Peptidase C1-like family
DDAIFOJL_00170 7.5e-146 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00171 8e-147
DDAIFOJL_00172 5.1e-98
DDAIFOJL_00175 1e-182 cat P Cation efflux family
DDAIFOJL_00176 3.4e-75 S Psort location CytoplasmicMembrane, score
DDAIFOJL_00177 2.7e-221 yxjG_1 E Psort location Cytoplasmic, score 8.87
DDAIFOJL_00178 2.4e-144 4.1.1.44 S Carboxymuconolactone decarboxylase family
DDAIFOJL_00179 4.6e-199 adhB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
DDAIFOJL_00180 6.7e-72 K MerR family regulatory protein
DDAIFOJL_00181 5.3e-119 ykoE S ABC-type cobalt transport system, permease component
DDAIFOJL_00182 4.5e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DDAIFOJL_00183 2.1e-119 yoaP E YoaP-like
DDAIFOJL_00185 3.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DDAIFOJL_00186 2.6e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
DDAIFOJL_00187 1.3e-148 yeaZ 2.3.1.234 O Glycoprotease family
DDAIFOJL_00188 2.1e-93 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
DDAIFOJL_00189 7.1e-178 holA 2.7.7.7 L DNA polymerase III delta subunit
DDAIFOJL_00190 0.0 comE S Competence protein
DDAIFOJL_00191 1.3e-92 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
DDAIFOJL_00192 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
DDAIFOJL_00193 1.5e-142 ET Bacterial periplasmic substrate-binding proteins
DDAIFOJL_00194 5.7e-172 corA P CorA-like Mg2+ transporter protein
DDAIFOJL_00195 1.5e-163 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
DDAIFOJL_00196 5.2e-65 3.4.22.70 M Sortase family
DDAIFOJL_00197 5.6e-83 3.4.22.70 M Sortase family
DDAIFOJL_00198 6.1e-302 M domain protein
DDAIFOJL_00199 2.7e-70 pdxH S Pfam:Pyridox_oxidase
DDAIFOJL_00200 3.8e-232 XK27_00240 K Fic/DOC family
DDAIFOJL_00203 2.1e-117
DDAIFOJL_00204 2.5e-143 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
DDAIFOJL_00205 3.6e-67 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DDAIFOJL_00206 2.9e-241 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DDAIFOJL_00207 9e-72 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
DDAIFOJL_00208 6.1e-108 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
DDAIFOJL_00209 1.1e-209 guaB 1.1.1.205 F IMP dehydrogenase family protein
DDAIFOJL_00210 5.3e-231 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
DDAIFOJL_00211 1.3e-266 G ABC transporter substrate-binding protein
DDAIFOJL_00212 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
DDAIFOJL_00213 3.3e-96 M Peptidase family M23
DDAIFOJL_00214 2.3e-60
DDAIFOJL_00217 5e-125 XK27_06785 V ABC transporter
DDAIFOJL_00218 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DDAIFOJL_00219 2.1e-109 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DDAIFOJL_00220 8.8e-139 S SdpI/YhfL protein family
DDAIFOJL_00221 1.8e-50 sdpR K helix_turn_helix, Arsenical Resistance Operon Repressor
DDAIFOJL_00222 6.1e-122 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
DDAIFOJL_00223 2.1e-218 yxjG_1 E Psort location Cytoplasmic, score 8.87
DDAIFOJL_00224 6.1e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DDAIFOJL_00225 8.8e-109 J Acetyltransferase (GNAT) domain
DDAIFOJL_00226 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DDAIFOJL_00227 2.9e-162 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
DDAIFOJL_00228 5.5e-124 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DDAIFOJL_00229 6.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DDAIFOJL_00230 9.3e-155 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
DDAIFOJL_00231 7e-178 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
DDAIFOJL_00232 1.1e-277 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DDAIFOJL_00233 4.2e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
DDAIFOJL_00234 3e-187 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
DDAIFOJL_00235 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
DDAIFOJL_00236 1.6e-157 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
DDAIFOJL_00237 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DDAIFOJL_00238 4.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
DDAIFOJL_00239 1.8e-198 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DDAIFOJL_00240 1.9e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
DDAIFOJL_00241 7.6e-249 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
DDAIFOJL_00242 2e-74
DDAIFOJL_00243 2.6e-307 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
DDAIFOJL_00244 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
DDAIFOJL_00245 3.9e-235 F Psort location CytoplasmicMembrane, score 10.00
DDAIFOJL_00246 2.1e-218 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
DDAIFOJL_00247 6.9e-289 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
DDAIFOJL_00248 5e-145 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
DDAIFOJL_00249 1.1e-233 hemN H Involved in the biosynthesis of porphyrin-containing compound
DDAIFOJL_00250 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DDAIFOJL_00251 2.9e-33 rpsT J Binds directly to 16S ribosomal RNA
DDAIFOJL_00252 1.1e-133 S UPF0126 domain
DDAIFOJL_00253 2.5e-227 ilvE 2.6.1.42 E Amino-transferase class IV
DDAIFOJL_00255 2.2e-72 K Acetyltransferase (GNAT) domain
DDAIFOJL_00256 3.2e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DDAIFOJL_00257 4.8e-93 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DDAIFOJL_00258 1e-89 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
DDAIFOJL_00259 3.8e-195 S alpha beta
DDAIFOJL_00260 1.3e-25 yhjX EGP Major facilitator Superfamily
DDAIFOJL_00261 2.6e-30 EGP Major facilitator Superfamily
DDAIFOJL_00262 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DDAIFOJL_00263 3.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DDAIFOJL_00265 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DDAIFOJL_00266 3.3e-74 nrdI F Probably involved in ribonucleotide reductase function
DDAIFOJL_00267 1.1e-39 nrdH O Glutaredoxin
DDAIFOJL_00269 5.4e-121 K Bacterial regulatory proteins, tetR family
DDAIFOJL_00270 3e-224 G Transmembrane secretion effector
DDAIFOJL_00272 9.4e-269 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00273 6e-258 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DDAIFOJL_00274 1.6e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
DDAIFOJL_00275 1.7e-202 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
DDAIFOJL_00276 0.0 fadD 6.2.1.3 I AMP-binding enzyme
DDAIFOJL_00277 2e-180 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DDAIFOJL_00278 5.9e-250 corC S CBS domain
DDAIFOJL_00279 9.4e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DDAIFOJL_00280 2.9e-207 phoH T PhoH-like protein
DDAIFOJL_00281 1.8e-56 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
DDAIFOJL_00282 2e-138 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
DDAIFOJL_00284 2.6e-163 spoU 2.1.1.185 J SpoU rRNA Methylase family
DDAIFOJL_00285 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DDAIFOJL_00286 6.1e-108 yitW S Iron-sulfur cluster assembly protein
DDAIFOJL_00287 3.4e-100 iscU C SUF system FeS assembly protein, NifU family
DDAIFOJL_00288 1.1e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DDAIFOJL_00289 1e-142 sufC O FeS assembly ATPase SufC
DDAIFOJL_00290 3.9e-234 sufD O FeS assembly protein SufD
DDAIFOJL_00291 1.6e-290 sufB O FeS assembly protein SufB
DDAIFOJL_00292 0.0 S L,D-transpeptidase catalytic domain
DDAIFOJL_00293 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DDAIFOJL_00294 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
DDAIFOJL_00295 4.9e-81 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
DDAIFOJL_00296 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DDAIFOJL_00297 1.3e-221 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DDAIFOJL_00298 9.3e-57 3.4.23.43 S Type IV leader peptidase family
DDAIFOJL_00299 8.9e-191 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DDAIFOJL_00300 2.7e-82 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DDAIFOJL_00301 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DDAIFOJL_00302 2.5e-36
DDAIFOJL_00303 3.4e-59 WQ51_05790 S Bacterial protein of unknown function (DUF948)
DDAIFOJL_00304 5.6e-129 pgm3 G Phosphoglycerate mutase family
DDAIFOJL_00305 4.5e-51 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
DDAIFOJL_00306 3.1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DDAIFOJL_00307 1.9e-150 lolD V ABC transporter
DDAIFOJL_00308 4.8e-216 V FtsX-like permease family
DDAIFOJL_00309 1.7e-61 S Domain of unknown function (DUF4418)
DDAIFOJL_00310 0.0 pcrA 3.6.4.12 L DNA helicase
DDAIFOJL_00311 1.5e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DDAIFOJL_00312 8e-244 pbuX F Permease family
DDAIFOJL_00313 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
DDAIFOJL_00314 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DDAIFOJL_00315 2.5e-300 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
DDAIFOJL_00316 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
DDAIFOJL_00317 8.7e-303 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
DDAIFOJL_00318 8.1e-66 yvbK 3.1.3.25 K Acetyltransferase (GNAT) domain
DDAIFOJL_00319 2.8e-249 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
DDAIFOJL_00321 9.7e-206 ykiI
DDAIFOJL_00322 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
DDAIFOJL_00323 1.9e-121 3.6.1.13 L NUDIX domain
DDAIFOJL_00324 3.5e-171 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
DDAIFOJL_00325 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DDAIFOJL_00326 9.4e-101 pdtaR T Response regulator receiver domain protein
DDAIFOJL_00327 8e-165 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
DDAIFOJL_00328 1.1e-60 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain protein
DDAIFOJL_00329 8.4e-107 L Belongs to the 'phage' integrase family
DDAIFOJL_00330 9.2e-70 hsdS 3.1.21.3 V type i restriction
DDAIFOJL_00331 1.2e-41 3.1.21.3 L PFAM restriction modification system DNA specificity domain
DDAIFOJL_00332 6.1e-245 hsdM 2.1.1.72 V HsdM N-terminal domain
DDAIFOJL_00333 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
DDAIFOJL_00334 3.9e-37 pcrA1 3.6.4.12 F DNA helicase
DDAIFOJL_00335 6.2e-101 E Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00336 8.3e-119 tcyA ET Bacterial periplasmic substrate-binding proteins
DDAIFOJL_00337 4.4e-112 3.6.3.21 E ATPases associated with a variety of cellular activities
DDAIFOJL_00338 7.5e-193 metC 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
DDAIFOJL_00340 2.9e-18 relB L RelB antitoxin
DDAIFOJL_00342 2.5e-305 pyk 2.7.1.40 G Pyruvate kinase
DDAIFOJL_00343 5.7e-175 terC P Integral membrane protein, TerC family
DDAIFOJL_00344 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DDAIFOJL_00345 2e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DDAIFOJL_00346 8.3e-255 rpsA J Ribosomal protein S1
DDAIFOJL_00347 7.1e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DDAIFOJL_00348 5.9e-173 P Zinc-uptake complex component A periplasmic
DDAIFOJL_00349 2e-160 znuC P ATPases associated with a variety of cellular activities
DDAIFOJL_00350 1e-140 znuB U ABC 3 transport family
DDAIFOJL_00351 7.8e-88 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
DDAIFOJL_00352 5.1e-102 carD K CarD-like/TRCF domain
DDAIFOJL_00353 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DDAIFOJL_00354 7.8e-129 T Response regulator receiver domain protein
DDAIFOJL_00355 6.8e-188 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
DDAIFOJL_00356 2.9e-139 ctsW S Phosphoribosyl transferase domain
DDAIFOJL_00357 1.1e-152 cof 5.2.1.8 T Eukaryotic phosphomannomutase
DDAIFOJL_00358 1.5e-71 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
DDAIFOJL_00359 3.3e-222
DDAIFOJL_00360 0.0 S Glycosyl transferase, family 2
DDAIFOJL_00361 3.4e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
DDAIFOJL_00362 4.8e-199 K Cell envelope-related transcriptional attenuator domain
DDAIFOJL_00364 4.4e-170 K Cell envelope-related transcriptional attenuator domain
DDAIFOJL_00365 0.0 D FtsK/SpoIIIE family
DDAIFOJL_00366 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
DDAIFOJL_00367 6e-277 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
DDAIFOJL_00368 1.8e-143 yplQ S Haemolysin-III related
DDAIFOJL_00369 2.6e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DDAIFOJL_00370 1.2e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
DDAIFOJL_00371 7.2e-283 sdaA 4.3.1.17 E Serine dehydratase alpha chain
DDAIFOJL_00372 1.5e-90
DDAIFOJL_00373 1.9e-71 P Major Facilitator Superfamily
DDAIFOJL_00375 4.4e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
DDAIFOJL_00376 7.5e-103 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
DDAIFOJL_00377 2e-71 divIC D Septum formation initiator
DDAIFOJL_00378 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DDAIFOJL_00379 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DDAIFOJL_00380 1.9e-112 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DDAIFOJL_00381 2e-94 2.3.1.183 M Acetyltransferase (GNAT) domain
DDAIFOJL_00382 0.0 S Uncharacterised protein family (UPF0182)
DDAIFOJL_00383 1.4e-178 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
DDAIFOJL_00384 6.2e-40 ybdD S Selenoprotein, putative
DDAIFOJL_00385 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
DDAIFOJL_00386 3.2e-53 azlD E Branched-chain amino acid transport protein (AzlD)
DDAIFOJL_00387 3.9e-142 azlC E AzlC protein
DDAIFOJL_00388 4.3e-86 M Protein of unknown function (DUF3737)
DDAIFOJL_00389 1.8e-81 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DDAIFOJL_00390 4.9e-145 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
DDAIFOJL_00391 5e-176 opcA G Glucose-6-phosphate dehydrogenase subunit
DDAIFOJL_00392 1.8e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DDAIFOJL_00393 4.7e-218 patB 4.4.1.8 E Aminotransferase, class I II
DDAIFOJL_00394 5.3e-147 S Belongs to the short-chain dehydrogenases reductases (SDR) family
DDAIFOJL_00395 1.2e-277 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DDAIFOJL_00396 0.0 lysX S Uncharacterised conserved protein (DUF2156)
DDAIFOJL_00397 2.9e-241 S Putative esterase
DDAIFOJL_00398 2.1e-141 ybbL V ATPases associated with a variety of cellular activities
DDAIFOJL_00399 1.8e-134 ybbM V Uncharacterised protein family (UPF0014)
DDAIFOJL_00400 6e-275 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
DDAIFOJL_00401 3e-125 S Enoyl-(Acyl carrier protein) reductase
DDAIFOJL_00402 3.6e-185 L Helix-turn-helix domain
DDAIFOJL_00403 3.7e-105 L Resolvase, N terminal domain
DDAIFOJL_00404 1.2e-25 S Protein of unknown function DUF86
DDAIFOJL_00405 4.1e-44 S Nucleotidyltransferase domain
DDAIFOJL_00406 2.9e-227 rutG F Permease family
DDAIFOJL_00407 1.4e-155 3.1.3.73 G Phosphoglycerate mutase family
DDAIFOJL_00408 1.5e-135 K helix_turn_helix, arabinose operon control protein
DDAIFOJL_00409 1.7e-143 S Sulfite exporter TauE/SafE
DDAIFOJL_00410 6.1e-68 S ECF transporter, substrate-specific component
DDAIFOJL_00411 3.8e-79 2.7.1.48 F uridine kinase
DDAIFOJL_00412 4.5e-158 korD 1.2.7.3 C Domain of unknown function (DUF362)
DDAIFOJL_00413 1.9e-186 C Na H antiporter family protein
DDAIFOJL_00414 1.1e-165 MA20_14895 S Conserved hypothetical protein 698
DDAIFOJL_00415 2.3e-94
DDAIFOJL_00416 2.9e-16 feoB P transporter of a GTP-driven Fe(2 ) uptake system
DDAIFOJL_00417 1.6e-44
DDAIFOJL_00418 1.9e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
DDAIFOJL_00419 1.9e-62 S Protein of unknown function (DUF4235)
DDAIFOJL_00420 2.4e-135 G Phosphoglycerate mutase family
DDAIFOJL_00421 3.9e-259 amyE G Bacterial extracellular solute-binding protein
DDAIFOJL_00422 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
DDAIFOJL_00423 2.4e-47 amyE G Bacterial extracellular solute-binding protein
DDAIFOJL_00424 7.6e-202 amyE G Bacterial extracellular solute-binding protein
DDAIFOJL_00425 1.8e-187 K Periplasmic binding protein-like domain
DDAIFOJL_00426 1.7e-182 K Psort location Cytoplasmic, score
DDAIFOJL_00427 4.1e-153 msmF G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00428 1.5e-152 rafG G ABC transporter permease
DDAIFOJL_00429 1.9e-104 S Protein of unknown function, DUF624
DDAIFOJL_00430 3.7e-108 pepE 3.4.13.21 E Peptidase family S51
DDAIFOJL_00431 2.9e-13 S Transposon-encoded protein TnpV
DDAIFOJL_00432 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
DDAIFOJL_00433 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
DDAIFOJL_00434 8.1e-227 malE G Bacterial extracellular solute-binding protein
DDAIFOJL_00435 2.7e-247 malF G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00436 3.5e-163 malG G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00437 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
DDAIFOJL_00438 5.4e-144 S HAD-hyrolase-like
DDAIFOJL_00439 1.4e-142 traX S TraX protein
DDAIFOJL_00440 1.3e-193 K Psort location Cytoplasmic, score
DDAIFOJL_00442 0.0 M cell wall anchor domain protein
DDAIFOJL_00443 4.7e-81 M LPXTG-motif cell wall anchor domain protein
DDAIFOJL_00444 5.2e-185 M Cna protein B-type domain
DDAIFOJL_00445 2.9e-156 srtC 3.4.22.70 M Sortase family
DDAIFOJL_00446 1e-128 S membrane transporter protein
DDAIFOJL_00447 8.1e-54 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
DDAIFOJL_00448 2.5e-144 S Mitochondrial biogenesis AIM24
DDAIFOJL_00449 0.0 dnaK O Heat shock 70 kDa protein
DDAIFOJL_00450 2.8e-48 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DDAIFOJL_00451 3.9e-158 dnaJ1 O DnaJ molecular chaperone homology domain
DDAIFOJL_00452 2.4e-113 hspR K transcriptional regulator, MerR family
DDAIFOJL_00453 8.6e-47
DDAIFOJL_00454 1.1e-127 S HAD hydrolase, family IA, variant 3
DDAIFOJL_00456 5.8e-126 dedA S SNARE associated Golgi protein
DDAIFOJL_00457 2.8e-17 3.2.1.78 GH26 G Glycosyl hydrolase family 26
DDAIFOJL_00458 6.1e-191 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DDAIFOJL_00459 6.6e-107
DDAIFOJL_00460 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DDAIFOJL_00461 0.0 cbgA_1 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
DDAIFOJL_00463 4.1e-135 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
DDAIFOJL_00464 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DDAIFOJL_00465 6.3e-219 lacS G Psort location CytoplasmicMembrane, score 10.00
DDAIFOJL_00466 1.9e-74 lacS G Psort location CytoplasmicMembrane, score 10.00
DDAIFOJL_00467 1.4e-209 GK ROK family
DDAIFOJL_00468 9.9e-241 G Bacterial extracellular solute-binding protein
DDAIFOJL_00469 7.5e-147 G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00470 4.4e-164 G ABC transporter permease
DDAIFOJL_00471 3e-173 2.7.1.2 GK ROK family
DDAIFOJL_00472 0.0 G Glycosyl hydrolase family 20, domain 2
DDAIFOJL_00473 2e-149 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DDAIFOJL_00474 2.3e-235 nagA 3.5.1.25 G Amidohydrolase family
DDAIFOJL_00475 1.5e-186 lacR K Transcriptional regulator, LacI family
DDAIFOJL_00476 0.0 T Diguanylate cyclase, GGDEF domain
DDAIFOJL_00477 2.9e-251 3.2.1.14 GH18 S Carbohydrate binding domain
DDAIFOJL_00478 0.0 M probably involved in cell wall
DDAIFOJL_00479 6.5e-190 K helix_turn _helix lactose operon repressor
DDAIFOJL_00480 4.3e-255 G Bacterial extracellular solute-binding protein
DDAIFOJL_00481 3.2e-159 G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00482 3.2e-153 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00483 5.6e-230 M Protein of unknown function (DUF2961)
DDAIFOJL_00484 3.8e-156 I alpha/beta hydrolase fold
DDAIFOJL_00485 5e-27 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00486 1.8e-214 lipA I Hydrolase, alpha beta domain protein
DDAIFOJL_00487 0.0 mdlA2 V ABC transporter
DDAIFOJL_00488 0.0 yknV V ABC transporter
DDAIFOJL_00489 3e-125
DDAIFOJL_00490 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
DDAIFOJL_00491 3.9e-221 K helix_turn _helix lactose operon repressor
DDAIFOJL_00492 2.3e-233 G Alpha galactosidase A
DDAIFOJL_00493 0.0 G Alpha-L-arabinofuranosidase C-terminus
DDAIFOJL_00494 7.7e-185 tatD L TatD related DNase
DDAIFOJL_00495 0.0 kup P Transport of potassium into the cell
DDAIFOJL_00496 1e-167 S Glutamine amidotransferase domain
DDAIFOJL_00497 3.3e-149 T HD domain
DDAIFOJL_00498 5.3e-159 V ABC transporter
DDAIFOJL_00499 1.4e-240 V ABC transporter permease
DDAIFOJL_00500 0.0 S Psort location CytoplasmicMembrane, score 9.99
DDAIFOJL_00501 2.9e-20 M cell wall binding repeat
DDAIFOJL_00503 7.5e-305 pepD E Peptidase family C69
DDAIFOJL_00504 4e-195 XK27_01805 M Glycosyltransferase like family 2
DDAIFOJL_00505 4.9e-108 icaR K Bacterial regulatory proteins, tetR family
DDAIFOJL_00506 5.2e-165 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DDAIFOJL_00507 1.2e-236 amt U Ammonium Transporter Family
DDAIFOJL_00508 1e-54 glnB K Nitrogen regulatory protein P-II
DDAIFOJL_00509 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
DDAIFOJL_00510 3.3e-248 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
DDAIFOJL_00511 4.9e-242 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
DDAIFOJL_00512 2.1e-137 cobQ S CobB/CobQ-like glutamine amidotransferase domain
DDAIFOJL_00513 1e-27 S granule-associated protein
DDAIFOJL_00514 0.0 ubiB S ABC1 family
DDAIFOJL_00515 1.1e-192 K Periplasmic binding protein domain
DDAIFOJL_00516 1.1e-242 G Bacterial extracellular solute-binding protein
DDAIFOJL_00517 4e-07 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00518 3.1e-167 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00519 9.3e-147 G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00520 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
DDAIFOJL_00521 0.0 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
DDAIFOJL_00522 0.0 G Bacterial Ig-like domain (group 4)
DDAIFOJL_00523 9.4e-208 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
DDAIFOJL_00524 2.7e-117 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DDAIFOJL_00525 3.9e-91
DDAIFOJL_00526 4.5e-224 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
DDAIFOJL_00527 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DDAIFOJL_00529 5.5e-141 cpaE D bacterial-type flagellum organization
DDAIFOJL_00530 1.8e-184 cpaF U Type II IV secretion system protein
DDAIFOJL_00531 2.4e-130 U Type ii secretion system
DDAIFOJL_00532 6.1e-91 gspF NU Type II secretion system (T2SS), protein F
DDAIFOJL_00533 1.3e-42 S Protein of unknown function (DUF4244)
DDAIFOJL_00534 5.1e-60 U TadE-like protein
DDAIFOJL_00535 4.7e-56 S TIGRFAM helicase secretion neighborhood TadE-like protein
DDAIFOJL_00536 1.9e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
DDAIFOJL_00537 1.6e-193 S Psort location CytoplasmicMembrane, score
DDAIFOJL_00538 1.9e-96 K Bacterial regulatory proteins, tetR family
DDAIFOJL_00539 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
DDAIFOJL_00540 1e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DDAIFOJL_00541 3.4e-135 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
DDAIFOJL_00542 1.4e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
DDAIFOJL_00543 1.8e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DDAIFOJL_00544 9.9e-67
DDAIFOJL_00545 4.8e-31
DDAIFOJL_00546 4e-45 K helix_turn_helix, Lux Regulon
DDAIFOJL_00547 9.4e-34 2.7.13.3 T Histidine kinase
DDAIFOJL_00548 2.4e-115
DDAIFOJL_00549 8.4e-301 S Calcineurin-like phosphoesterase
DDAIFOJL_00550 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DDAIFOJL_00551 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
DDAIFOJL_00552 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
DDAIFOJL_00553 0.0 3.2.1.97 GH101 G Glycosyl hydrolases family 43
DDAIFOJL_00554 5.4e-195 K helix_turn _helix lactose operon repressor
DDAIFOJL_00555 1.3e-203 abf G Glycosyl hydrolases family 43
DDAIFOJL_00556 2.7e-244 G Bacterial extracellular solute-binding protein
DDAIFOJL_00557 5e-168 G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00558 4.6e-155 U Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00559 0.0 S Beta-L-arabinofuranosidase, GH127
DDAIFOJL_00560 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
DDAIFOJL_00561 2.7e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
DDAIFOJL_00562 5.9e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
DDAIFOJL_00563 2.3e-191 3.6.1.27 I PAP2 superfamily
DDAIFOJL_00564 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DDAIFOJL_00565 4.1e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DDAIFOJL_00566 1.2e-192 holB 2.7.7.7 L DNA polymerase III
DDAIFOJL_00567 7.6e-186 K helix_turn _helix lactose operon repressor
DDAIFOJL_00568 6e-39 ptsH G PTS HPr component phosphorylation site
DDAIFOJL_00569 4.6e-286 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DDAIFOJL_00570 1.1e-106 S Phosphatidylethanolamine-binding protein
DDAIFOJL_00571 0.0 pepD E Peptidase family C69
DDAIFOJL_00572 1.5e-288 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
DDAIFOJL_00573 6.7e-62 S Macrophage migration inhibitory factor (MIF)
DDAIFOJL_00574 7.1e-95 S GtrA-like protein
DDAIFOJL_00575 2.1e-263 EGP Major facilitator Superfamily
DDAIFOJL_00576 9.9e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
DDAIFOJL_00577 7e-184
DDAIFOJL_00578 1.3e-17 M cell wall binding repeat
DDAIFOJL_00579 6e-38 nrdH O Glutaredoxin
DDAIFOJL_00580 7e-226 S Putative ABC-transporter type IV
DDAIFOJL_00581 0.0 pip S YhgE Pip domain protein
DDAIFOJL_00582 1.3e-275 pip S YhgE Pip domain protein
DDAIFOJL_00583 1e-87 K Psort location Cytoplasmic, score 8.87
DDAIFOJL_00584 2.4e-61 S FMN_bind
DDAIFOJL_00585 5e-148 macB V ABC transporter, ATP-binding protein
DDAIFOJL_00586 5.4e-202 Z012_06715 V FtsX-like permease family
DDAIFOJL_00588 1.1e-219 macB_2 V ABC transporter permease
DDAIFOJL_00589 6.1e-230 S Predicted membrane protein (DUF2318)
DDAIFOJL_00590 2.4e-92 tpd P Fe2+ transport protein
DDAIFOJL_00591 3e-299 efeU_1 P Iron permease FTR1 family
DDAIFOJL_00592 8.8e-238 G MFS/sugar transport protein
DDAIFOJL_00593 7.4e-119 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DDAIFOJL_00594 0.0 lmrA2 V ABC transporter transmembrane region
DDAIFOJL_00595 2.7e-285 lmrA1 V ABC transporter, ATP-binding protein
DDAIFOJL_00596 1.9e-57 ydgJ K helix_turn_helix multiple antibiotic resistance protein
DDAIFOJL_00597 1.8e-182 1.1.1.65 C Aldo/keto reductase family
DDAIFOJL_00598 2.9e-26 thiS 2.8.1.10 H ThiS family
DDAIFOJL_00599 1.9e-127 thiF 2.7.7.73, 2.7.7.80 H ThiF family
DDAIFOJL_00600 1.2e-166 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
DDAIFOJL_00601 9.9e-275 cycA E Amino acid permease
DDAIFOJL_00602 2.5e-89 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00603 2.2e-194 M LPXTG cell wall anchor motif
DDAIFOJL_00604 6.7e-120 Q von Willebrand factor (vWF) type A domain
DDAIFOJL_00605 4e-177 3.4.22.70 M Sortase family
DDAIFOJL_00606 1.3e-76 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00607 1.3e-226 P Sodium/hydrogen exchanger family
DDAIFOJL_00608 0.0 V FtsX-like permease family
DDAIFOJL_00609 4.1e-270 aroP E aromatic amino acid transport protein AroP K03293
DDAIFOJL_00610 7.3e-189 K helix_turn _helix lactose operon repressor
DDAIFOJL_00611 4.9e-39 G beta-mannosidase
DDAIFOJL_00612 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
DDAIFOJL_00613 4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DDAIFOJL_00614 1.8e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DDAIFOJL_00615 3.5e-252 yhjE EGP Sugar (and other) transporter
DDAIFOJL_00616 5.8e-278 scrT G Transporter major facilitator family protein
DDAIFOJL_00617 2.7e-149 amyC5 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00618 2.9e-162 amyD3 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00619 3.8e-219 G Bacterial extracellular solute-binding protein
DDAIFOJL_00620 0.0 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
DDAIFOJL_00621 2.4e-113 S Protein of unknown function, DUF624
DDAIFOJL_00622 3.1e-297 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
DDAIFOJL_00623 1.1e-195 K helix_turn _helix lactose operon repressor
DDAIFOJL_00624 5.4e-29 E Receptor family ligand binding region
DDAIFOJL_00625 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DDAIFOJL_00626 3.7e-153 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DDAIFOJL_00627 3.9e-131 clcA P Voltage gated chloride channel
DDAIFOJL_00628 5.7e-85 K Cro/C1-type HTH DNA-binding domain
DDAIFOJL_00629 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
DDAIFOJL_00630 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DDAIFOJL_00631 8.3e-112 S Short repeat of unknown function (DUF308)
DDAIFOJL_00632 2.7e-49 S Antitoxin component of a toxin-antitoxin (TA) module
DDAIFOJL_00633 7.5e-55 DJ Addiction module toxin, RelE StbE family
DDAIFOJL_00634 2.6e-13 S Psort location Extracellular, score 8.82
DDAIFOJL_00635 1.1e-231 EGP Major facilitator Superfamily
DDAIFOJL_00636 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DDAIFOJL_00637 2e-269 KLT Domain of unknown function (DUF4032)
DDAIFOJL_00638 1.6e-210 ugpC E Belongs to the ABC transporter superfamily
DDAIFOJL_00639 2.8e-131 K LytTr DNA-binding domain
DDAIFOJL_00640 2.7e-234 T GHKL domain
DDAIFOJL_00641 2.7e-56
DDAIFOJL_00642 1.3e-217 clcA_2 P Voltage gated chloride channel
DDAIFOJL_00643 8.8e-48 S Psort location Cytoplasmic, score
DDAIFOJL_00644 4.9e-137
DDAIFOJL_00645 2.9e-163 3.4.22.70 M Sortase family
DDAIFOJL_00646 2.2e-296 M LPXTG-motif cell wall anchor domain protein
DDAIFOJL_00647 0.0 S LPXTG-motif cell wall anchor domain protein
DDAIFOJL_00648 6e-100 S GtrA-like protein
DDAIFOJL_00649 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
DDAIFOJL_00651 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
DDAIFOJL_00652 1.5e-293 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
DDAIFOJL_00653 8.4e-81 K Psort location Cytoplasmic, score
DDAIFOJL_00654 2.2e-185 amyE G Bacterial extracellular solute-binding protein
DDAIFOJL_00655 4.4e-123 msmF G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00656 4.2e-118 rafG G ABC transporter permease
DDAIFOJL_00657 5.1e-30 S Protein of unknown function, DUF624
DDAIFOJL_00658 3.9e-87 L transposase activity
DDAIFOJL_00659 1.8e-114 L PFAM Integrase catalytic
DDAIFOJL_00660 4.3e-116 3.6.1.27 I Psort location CytoplasmicMembrane, score
DDAIFOJL_00661 2.1e-81 ypeA 2.3.1.1 K Psort location Cytoplasmic, score 8.87
DDAIFOJL_00662 1.1e-113 vex2 V ABC transporter, ATP-binding protein
DDAIFOJL_00663 4.5e-214 vex1 V Efflux ABC transporter, permease protein
DDAIFOJL_00664 3.2e-240 vex3 V ABC transporter permease
DDAIFOJL_00665 2.1e-18 lacS G Psort location CytoplasmicMembrane, score 10.00
DDAIFOJL_00666 9.7e-43 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
DDAIFOJL_00667 2.6e-228 yhjX EGP Major facilitator Superfamily
DDAIFOJL_00668 0.0 trxB1 1.8.1.9 C Thioredoxin domain
DDAIFOJL_00669 1.7e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
DDAIFOJL_00670 2e-171 I alpha/beta hydrolase fold
DDAIFOJL_00672 6.2e-145 cobB2 K Sir2 family
DDAIFOJL_00673 4.1e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
DDAIFOJL_00674 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
DDAIFOJL_00675 3.4e-155 G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00676 2.1e-158 G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00677 2.9e-243 msmE7 G Bacterial extracellular solute-binding protein
DDAIFOJL_00678 5.8e-230 nagC GK ROK family
DDAIFOJL_00679 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
DDAIFOJL_00680 1.4e-77 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DDAIFOJL_00681 0.0 yjcE P Sodium/hydrogen exchanger family
DDAIFOJL_00682 7.2e-152 ypfH S Phospholipase/Carboxylesterase
DDAIFOJL_00683 1.2e-111 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
DDAIFOJL_00684 2.8e-22 V Type II restriction enzyme, methylase subunits
DDAIFOJL_00685 3.3e-155 ksgA 2.1.1.182, 2.1.1.184 J Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family
DDAIFOJL_00686 5.1e-260 EGP Transmembrane secretion effector
DDAIFOJL_00687 4.3e-55 KLT Protein tyrosine kinase
DDAIFOJL_00688 3.8e-166 G ABC transporter permease
DDAIFOJL_00689 2.5e-147 G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00690 8.9e-54 L Helix-turn-helix domain
DDAIFOJL_00691 1.8e-119 insK L Integrase core domain
DDAIFOJL_00692 1.9e-132 plsC2 2.3.1.51 I Phosphate acyltransferases
DDAIFOJL_00693 1.3e-97
DDAIFOJL_00694 3.4e-194 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DDAIFOJL_00695 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DDAIFOJL_00696 3.3e-118 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DDAIFOJL_00697 3.5e-123 recX S Modulates RecA activity
DDAIFOJL_00698 5.4e-212 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DDAIFOJL_00699 4.3e-46 S Protein of unknown function (DUF3046)
DDAIFOJL_00700 6.1e-80 K Helix-turn-helix XRE-family like proteins
DDAIFOJL_00701 5.5e-98 cinA 3.5.1.42 S Belongs to the CinA family
DDAIFOJL_00702 2e-123 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DDAIFOJL_00703 0.0 ftsK D FtsK SpoIIIE family protein
DDAIFOJL_00704 1.9e-192 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DDAIFOJL_00705 2.3e-281 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
DDAIFOJL_00706 1.1e-155 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
DDAIFOJL_00707 8e-177 ydeD EG EamA-like transporter family
DDAIFOJL_00708 1.7e-127 ybhL S Belongs to the BI1 family
DDAIFOJL_00709 1.4e-57 S Domain of unknown function (DUF5067)
DDAIFOJL_00710 5.1e-243 T Histidine kinase
DDAIFOJL_00711 1.8e-127 K helix_turn_helix, Lux Regulon
DDAIFOJL_00712 0.0 S Protein of unknown function DUF262
DDAIFOJL_00713 9e-116 K helix_turn_helix, Lux Regulon
DDAIFOJL_00714 1.1e-245 T Histidine kinase
DDAIFOJL_00715 4.4e-191 V ATPases associated with a variety of cellular activities
DDAIFOJL_00716 7.7e-225 V ABC-2 family transporter protein
DDAIFOJL_00717 8.9e-229 V ABC-2 family transporter protein
DDAIFOJL_00718 2.2e-209 rhaR1 K helix_turn_helix, arabinose operon control protein
DDAIFOJL_00719 4.7e-109 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
DDAIFOJL_00720 9.9e-250 VP1224 V Psort location CytoplasmicMembrane, score 9.99
DDAIFOJL_00721 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DDAIFOJL_00722 0.0 ctpE P E1-E2 ATPase
DDAIFOJL_00723 2e-74
DDAIFOJL_00724 4.8e-243 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DDAIFOJL_00725 2.4e-133 S Protein of unknown function (DUF3159)
DDAIFOJL_00726 1.7e-151 S Protein of unknown function (DUF3710)
DDAIFOJL_00727 3e-172 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
DDAIFOJL_00728 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
DDAIFOJL_00729 4.1e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
DDAIFOJL_00730 1.6e-155 dppB EP Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00731 0.0 E ABC transporter, substrate-binding protein, family 5
DDAIFOJL_00732 0.0 E ABC transporter, substrate-binding protein, family 5
DDAIFOJL_00733 1.6e-171 xerC D Belongs to the 'phage' integrase family. XerC subfamily
DDAIFOJL_00734 5.2e-08
DDAIFOJL_00735 2.8e-34
DDAIFOJL_00736 2.6e-194 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
DDAIFOJL_00737 3.7e-190 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
DDAIFOJL_00738 5.8e-98
DDAIFOJL_00739 0.0 typA T Elongation factor G C-terminus
DDAIFOJL_00740 1.7e-249 naiP U Sugar (and other) transporter
DDAIFOJL_00741 2.1e-151 nrtR 3.6.1.55 F NUDIX hydrolase
DDAIFOJL_00742 6.8e-153 soj D CobQ CobB MinD ParA nucleotide binding domain protein
DDAIFOJL_00743 1.3e-176 xerD D recombinase XerD
DDAIFOJL_00744 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DDAIFOJL_00745 2.1e-25 rpmI J Ribosomal protein L35
DDAIFOJL_00746 1.6e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DDAIFOJL_00747 3.7e-110 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
DDAIFOJL_00748 1.8e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DDAIFOJL_00749 2.1e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DDAIFOJL_00750 7.9e-172 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
DDAIFOJL_00751 4.3e-188 galM 5.1.3.3 G Aldose 1-epimerase
DDAIFOJL_00752 1e-35
DDAIFOJL_00753 1.3e-97 sigH K Belongs to the sigma-70 factor family. ECF subfamily
DDAIFOJL_00754 4e-276 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DDAIFOJL_00755 9.5e-186 V Acetyltransferase (GNAT) domain
DDAIFOJL_00756 1.9e-289 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
DDAIFOJL_00757 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
DDAIFOJL_00758 2e-94 3.6.1.55 F NUDIX domain
DDAIFOJL_00759 0.0 P Belongs to the ABC transporter superfamily
DDAIFOJL_00760 4.7e-192 dppC EP Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00761 1.7e-188 dppB EP Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00762 4.7e-307 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
DDAIFOJL_00763 1e-218 GK ROK family
DDAIFOJL_00764 1.1e-164 2.7.1.4 G pfkB family carbohydrate kinase
DDAIFOJL_00765 3.5e-220 S Metal-independent alpha-mannosidase (GH125)
DDAIFOJL_00766 1.6e-27
DDAIFOJL_00767 8.4e-248 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
DDAIFOJL_00768 1.7e-140 ftsQ 6.3.2.4 D Cell division protein FtsQ
DDAIFOJL_00769 2.3e-271 murC 6.3.2.8 M Belongs to the MurCDEF family
DDAIFOJL_00770 6.3e-216 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DDAIFOJL_00771 1.4e-202 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
DDAIFOJL_00772 6.2e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DDAIFOJL_00773 3.2e-195 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DDAIFOJL_00774 6.4e-263 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DDAIFOJL_00775 5.9e-147 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DDAIFOJL_00776 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
DDAIFOJL_00777 4.6e-63 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
DDAIFOJL_00778 1.3e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DDAIFOJL_00779 1.6e-91 mraZ K Belongs to the MraZ family
DDAIFOJL_00780 0.0 L DNA helicase
DDAIFOJL_00781 3.5e-219 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
DDAIFOJL_00782 8.5e-84 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DDAIFOJL_00783 1e-53 M Lysin motif
DDAIFOJL_00784 2.2e-131 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DDAIFOJL_00785 1.3e-149 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DDAIFOJL_00786 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
DDAIFOJL_00787 4.9e-271 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DDAIFOJL_00788 1.1e-112 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
DDAIFOJL_00789 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
DDAIFOJL_00790 8.1e-191
DDAIFOJL_00791 3.3e-184 V N-Acetylmuramoyl-L-alanine amidase
DDAIFOJL_00792 8.4e-80
DDAIFOJL_00793 5.4e-57 T helix_turn_helix, Lux Regulon
DDAIFOJL_00794 8.7e-29 2.7.13.3 T Histidine kinase
DDAIFOJL_00795 3.2e-118 ytrE V ATPases associated with a variety of cellular activities
DDAIFOJL_00796 3.6e-219 EGP Major facilitator Superfamily
DDAIFOJL_00797 3.6e-139 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
DDAIFOJL_00798 5.6e-219 S Domain of unknown function (DUF5067)
DDAIFOJL_00799 3.1e-264 glnA2 6.3.1.2 E glutamine synthetase
DDAIFOJL_00800 1.4e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
DDAIFOJL_00801 6.3e-122 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DDAIFOJL_00802 1.5e-122
DDAIFOJL_00803 1.5e-109 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
DDAIFOJL_00804 2.5e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DDAIFOJL_00805 6.9e-259 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DDAIFOJL_00806 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
DDAIFOJL_00807 4.9e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
DDAIFOJL_00808 4.3e-87 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DDAIFOJL_00809 4.5e-31 3.1.21.3 V DivIVA protein
DDAIFOJL_00810 3.4e-40 yggT S YGGT family
DDAIFOJL_00811 8.9e-81 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DDAIFOJL_00812 5.6e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DDAIFOJL_00813 1.1e-244 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DDAIFOJL_00814 1.3e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
DDAIFOJL_00815 1e-105 S Pilus assembly protein, PilO
DDAIFOJL_00816 1.8e-165 pilN NU PFAM Fimbrial assembly family protein
DDAIFOJL_00817 1.1e-189 pilM NU Type IV pilus assembly protein PilM;
DDAIFOJL_00818 2.4e-150 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
DDAIFOJL_00819 0.0
DDAIFOJL_00820 9.5e-231 pilC U Type II secretion system (T2SS), protein F
DDAIFOJL_00821 1.8e-40 pilA NU Prokaryotic N-terminal methylation motif
DDAIFOJL_00822 2.1e-104 S Prokaryotic N-terminal methylation motif
DDAIFOJL_00823 1.4e-136 ppdC NU Prokaryotic N-terminal methylation motif
DDAIFOJL_00824 0.0 pulE NU Type II/IV secretion system protein
DDAIFOJL_00825 0.0 pilT NU Type II/IV secretion system protein
DDAIFOJL_00826 0.0
DDAIFOJL_00827 9.9e-155 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
DDAIFOJL_00828 1.1e-133 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
DDAIFOJL_00829 2.9e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
DDAIFOJL_00830 3e-60 S Thiamine-binding protein
DDAIFOJL_00831 3.7e-193 K helix_turn _helix lactose operon repressor
DDAIFOJL_00832 2.8e-241 lacY P LacY proton/sugar symporter
DDAIFOJL_00833 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
DDAIFOJL_00834 8.5e-143 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00835 5.3e-206 P NMT1/THI5 like
DDAIFOJL_00836 2.1e-217 iunH1 3.2.2.1 F nucleoside hydrolase
DDAIFOJL_00837 4e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DDAIFOJL_00838 1.8e-133 recO L Involved in DNA repair and RecF pathway recombination
DDAIFOJL_00839 0.0 I acetylesterase activity
DDAIFOJL_00840 5.6e-225 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
DDAIFOJL_00841 6.3e-205 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
DDAIFOJL_00842 1.8e-239 2.7.11.1 NU Tfp pilus assembly protein FimV
DDAIFOJL_00844 6.5e-75 S Protein of unknown function (DUF3052)
DDAIFOJL_00845 1e-154 lon T Belongs to the peptidase S16 family
DDAIFOJL_00846 1.6e-283 S Zincin-like metallopeptidase
DDAIFOJL_00847 1.6e-282 uvrD2 3.6.4.12 L DNA helicase
DDAIFOJL_00848 1.2e-269 mphA S Aminoglycoside phosphotransferase
DDAIFOJL_00849 3.6e-32 S Protein of unknown function (DUF3107)
DDAIFOJL_00850 1.6e-171 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
DDAIFOJL_00851 4e-116 S Vitamin K epoxide reductase
DDAIFOJL_00852 2.3e-170 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
DDAIFOJL_00853 2.2e-145 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
DDAIFOJL_00854 2.3e-301 E ABC transporter, substrate-binding protein, family 5
DDAIFOJL_00855 4.9e-176 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
DDAIFOJL_00856 1.5e-160 S Patatin-like phospholipase
DDAIFOJL_00857 3.9e-187 K LysR substrate binding domain protein
DDAIFOJL_00858 1.6e-240 patB 4.4.1.8 E Aminotransferase, class I II
DDAIFOJL_00859 3.1e-124 S Phospholipase/Carboxylesterase
DDAIFOJL_00860 7.1e-12
DDAIFOJL_00861 1.4e-14
DDAIFOJL_00862 3e-83 L IstB-like ATP binding protein
DDAIFOJL_00863 1.7e-78 L PFAM Integrase catalytic
DDAIFOJL_00864 6.5e-120 L PFAM Integrase catalytic
DDAIFOJL_00865 3.3e-33 ligA 2.7.7.7, 6.5.1.2 L EXOIII
DDAIFOJL_00866 3.7e-46 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
DDAIFOJL_00867 2.4e-92 I PLD-like domain
DDAIFOJL_00868 2.5e-311 S Domain of unknown function (DUF1998)
DDAIFOJL_00869 0.0 L Helicase conserved C-terminal domain
DDAIFOJL_00870 0.0 resA 3.1.21.5 KL Type III restriction enzyme, res subunit
DDAIFOJL_00871 4.2e-167 2.1.1.72 L DNA methylase
DDAIFOJL_00872 0.0 snf2 2.1.1.72 L SNF2 family N-terminal domain
DDAIFOJL_00873 2.3e-216 dcm 2.1.1.37 L C-5 cytosine-specific DNA methylase
DDAIFOJL_00874 2.3e-30 K Cro/C1-type HTH DNA-binding domain
DDAIFOJL_00875 3.5e-97 S Uncharacterised protein conserved in bacteria (DUF2326)
DDAIFOJL_00876 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DDAIFOJL_00877 1e-257 lacS G Psort location CytoplasmicMembrane, score 10.00
DDAIFOJL_00878 2.8e-185 lacR K Transcriptional regulator, LacI family
DDAIFOJL_00879 0.0 V ABC transporter transmembrane region
DDAIFOJL_00880 0.0 V ABC transporter, ATP-binding protein
DDAIFOJL_00881 1.3e-96 K MarR family
DDAIFOJL_00882 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
DDAIFOJL_00883 1.8e-104 K Bacterial regulatory proteins, tetR family
DDAIFOJL_00884 3.6e-200 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
DDAIFOJL_00885 1.9e-181 G Transporter major facilitator family protein
DDAIFOJL_00886 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
DDAIFOJL_00887 2.2e-214 EGP Major facilitator Superfamily
DDAIFOJL_00888 8.9e-118 K Periplasmic binding protein domain
DDAIFOJL_00889 3.3e-14 K helix_turn_helix, mercury resistance
DDAIFOJL_00890 1.2e-219 lmrB U Major Facilitator Superfamily
DDAIFOJL_00891 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
DDAIFOJL_00892 2.3e-108 K Bacterial regulatory proteins, tetR family
DDAIFOJL_00893 1.1e-239 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
DDAIFOJL_00894 0.0 3.2.1.37 GH43 G Glycosyl hydrolases family 43
DDAIFOJL_00895 1.7e-242 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
DDAIFOJL_00896 9.3e-199 P Major Facilitator Superfamily
DDAIFOJL_00897 1.2e-64 Q AMP-binding enzyme C-terminal domain
DDAIFOJL_00898 9.2e-25 S Polyketide cyclase / dehydrase and lipid transport
DDAIFOJL_00899 3e-16 srfAB Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DDAIFOJL_00900 1.9e-209 hsvB 6.3.2.4 M Belongs to the D-alanine--D-alanine ligase family
DDAIFOJL_00901 2e-130 ydjE EGP Major facilitator Superfamily
DDAIFOJL_00902 2.6e-20 Q Belongs to the P-Pant transferase superfamily
DDAIFOJL_00904 1.2e-271 srfJ1 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
DDAIFOJL_00906 1.9e-218 G Transporter major facilitator family protein
DDAIFOJL_00907 1.7e-111 K Bacterial regulatory proteins, tetR family
DDAIFOJL_00908 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
DDAIFOJL_00909 5.7e-120 K Bacterial regulatory proteins, tetR family
DDAIFOJL_00910 1.2e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
DDAIFOJL_00911 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
DDAIFOJL_00912 3.9e-156 hgdC I BadF/BadG/BcrA/BcrD ATPase family
DDAIFOJL_00913 1.6e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DDAIFOJL_00914 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
DDAIFOJL_00915 8.9e-245 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DDAIFOJL_00916 7e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DDAIFOJL_00918 1.2e-197 S Endonuclease/Exonuclease/phosphatase family
DDAIFOJL_00919 6.1e-126 tmp1 S Domain of unknown function (DUF4391)
DDAIFOJL_00920 2.9e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
DDAIFOJL_00921 3.5e-235 aspB E Aminotransferase class-V
DDAIFOJL_00922 6.6e-74 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
DDAIFOJL_00923 1.6e-185 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
DDAIFOJL_00924 0.0 helD 3.6.4.12 L Psort location Cytoplasmic, score 8.87
DDAIFOJL_00925 5.5e-200 V Domain of unknown function (DUF3427)
DDAIFOJL_00926 1.5e-76
DDAIFOJL_00927 7.5e-71 S Bacterial PH domain
DDAIFOJL_00928 6.7e-248 S zinc finger
DDAIFOJL_00929 3.8e-29 L transposase activity
DDAIFOJL_00930 7.9e-73 tnp7109-46 L Transposase and inactivated derivatives
DDAIFOJL_00931 1.7e-92 S Protein of unknown function (DUF805)
DDAIFOJL_00932 5.5e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DDAIFOJL_00935 5.9e-280 S Calcineurin-like phosphoesterase
DDAIFOJL_00936 1.1e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
DDAIFOJL_00937 7.1e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DDAIFOJL_00938 3.7e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DDAIFOJL_00939 3.6e-200 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
DDAIFOJL_00940 1e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DDAIFOJL_00941 5.5e-177 plsC2 2.3.1.51 I Phosphate acyltransferases
DDAIFOJL_00942 1.7e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
DDAIFOJL_00943 9.8e-219 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
DDAIFOJL_00944 5.8e-219 P Bacterial extracellular solute-binding protein
DDAIFOJL_00945 3e-157 U Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00946 4.9e-130 U Binding-protein-dependent transport system inner membrane component
DDAIFOJL_00947 2.6e-214 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DDAIFOJL_00948 6.7e-180 S CAAX protease self-immunity
DDAIFOJL_00949 1.7e-137 M Mechanosensitive ion channel
DDAIFOJL_00950 3.8e-229 MA20_36090 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00951 2.4e-228 MA20_36090 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00952 6.3e-125 K Bacterial regulatory proteins, tetR family
DDAIFOJL_00953 1.4e-231 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
DDAIFOJL_00954 5.2e-167 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase, C-terminal domain
DDAIFOJL_00956 6e-228 gnuT EG GntP family permease
DDAIFOJL_00957 4.7e-78 gntK 2.7.1.12 F Shikimate kinase
DDAIFOJL_00958 4.8e-126 gntR K FCD
DDAIFOJL_00959 4.6e-228 yxiO S Vacuole effluxer Atg22 like
DDAIFOJL_00960 0.0 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_00961 8.4e-30 rpmB J Ribosomal L28 family
DDAIFOJL_00962 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
DDAIFOJL_00963 4.2e-104 rsmD 2.1.1.171 L Conserved hypothetical protein 95
DDAIFOJL_00964 1.6e-150 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
DDAIFOJL_00965 3.6e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DDAIFOJL_00966 1.8e-34 CP_0960 S Belongs to the UPF0109 family
DDAIFOJL_00967 4.3e-53 rpsP J Belongs to the bacterial ribosomal protein bS16 family
DDAIFOJL_00968 4e-179 S Endonuclease/Exonuclease/phosphatase family
DDAIFOJL_00969 1.3e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DDAIFOJL_00971 1.6e-94
DDAIFOJL_00972 1.4e-303 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
DDAIFOJL_00973 1.1e-152 guaA1 6.3.5.2 F Peptidase C26
DDAIFOJL_00974 0.0 yjjK S ABC transporter
DDAIFOJL_00975 8.4e-96
DDAIFOJL_00976 5.7e-92 ilvN 2.2.1.6 E ACT domain
DDAIFOJL_00977 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
DDAIFOJL_00978 5.7e-136 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DDAIFOJL_00979 1e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
DDAIFOJL_00980 1.8e-113 yceD S Uncharacterized ACR, COG1399
DDAIFOJL_00981 2.5e-133
DDAIFOJL_00982 7.7e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DDAIFOJL_00983 3.2e-58 S Protein of unknown function (DUF3039)
DDAIFOJL_00984 1.7e-195 yghZ C Aldo/keto reductase family
DDAIFOJL_00985 2.4e-77 soxR K MerR, DNA binding
DDAIFOJL_00986 9.8e-118 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DDAIFOJL_00987 3.9e-139 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DDAIFOJL_00988 3.8e-251 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DDAIFOJL_00989 2.4e-242 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
DDAIFOJL_00990 2.2e-32 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
DDAIFOJL_00991 1.3e-163 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
DDAIFOJL_00994 5.4e-181 S Auxin Efflux Carrier
DDAIFOJL_00995 0.0 pgi 5.3.1.9 G Belongs to the GPI family
DDAIFOJL_00996 1.5e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DDAIFOJL_00997 1.1e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DDAIFOJL_00998 2.1e-137 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DDAIFOJL_00999 5e-128 V ATPases associated with a variety of cellular activities
DDAIFOJL_01000 9.7e-251 V Efflux ABC transporter, permease protein
DDAIFOJL_01001 6.3e-163 mdcF S Transporter, auxin efflux carrier (AEC) family protein
DDAIFOJL_01002 2.7e-227 dapE 3.5.1.18 E Peptidase dimerisation domain
DDAIFOJL_01003 1.5e-308 rne 3.1.26.12 J Ribonuclease E/G family
DDAIFOJL_01004 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
DDAIFOJL_01005 2.6e-39 rpmA J Ribosomal L27 protein
DDAIFOJL_01006 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DDAIFOJL_01007 1e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DDAIFOJL_01008 2.2e-232 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
DDAIFOJL_01010 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DDAIFOJL_01011 2.9e-129 nusG K Participates in transcription elongation, termination and antitermination
DDAIFOJL_01012 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DDAIFOJL_01013 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DDAIFOJL_01014 5.9e-143 QT PucR C-terminal helix-turn-helix domain
DDAIFOJL_01015 0.0
DDAIFOJL_01016 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
DDAIFOJL_01017 2.1e-79 bioY S BioY family
DDAIFOJL_01018 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
DDAIFOJL_01019 4.6e-311 pccB I Carboxyl transferase domain
DDAIFOJL_01020 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
DDAIFOJL_01022 1.2e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DDAIFOJL_01023 0.0 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
DDAIFOJL_01025 2.4e-116
DDAIFOJL_01026 1.7e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DDAIFOJL_01027 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
DDAIFOJL_01028 1.7e-91 lemA S LemA family
DDAIFOJL_01029 0.0 S Predicted membrane protein (DUF2207)
DDAIFOJL_01030 8.3e-170 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
DDAIFOJL_01031 2.4e-297 yegQ O Peptidase family U32 C-terminal domain
DDAIFOJL_01032 4.1e-184 yfiH Q Multi-copper polyphenol oxidoreductase laccase
DDAIFOJL_01033 1.4e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
DDAIFOJL_01034 3.4e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DDAIFOJL_01035 1.3e-58 D nuclear chromosome segregation
DDAIFOJL_01036 1.5e-266 pepC 3.4.22.40 E Peptidase C1-like family
DDAIFOJL_01037 9.7e-211 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DDAIFOJL_01038 9.8e-222 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DDAIFOJL_01039 2.8e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DDAIFOJL_01040 1.1e-219 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
DDAIFOJL_01041 9.8e-129 KT Transcriptional regulatory protein, C terminal
DDAIFOJL_01042 3.6e-197 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
DDAIFOJL_01043 3.7e-163 pstC P probably responsible for the translocation of the substrate across the membrane
DDAIFOJL_01044 4e-168 pstA P Phosphate transport system permease
DDAIFOJL_01045 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DDAIFOJL_01046 1.5e-142 P Zinc-uptake complex component A periplasmic
DDAIFOJL_01047 1.3e-246 pbuO S Permease family
DDAIFOJL_01048 1.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DDAIFOJL_01049 2.4e-36 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DDAIFOJL_01050 7.3e-176 T Forkhead associated domain
DDAIFOJL_01051 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
DDAIFOJL_01052 7e-35
DDAIFOJL_01053 5e-93 flgA NO SAF
DDAIFOJL_01054 6.1e-30 fmdB S Putative regulatory protein
DDAIFOJL_01055 1.4e-100 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
DDAIFOJL_01056 2.9e-122 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
DDAIFOJL_01057 1.6e-147
DDAIFOJL_01058 2.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DDAIFOJL_01062 5.5e-25 rpmG J Ribosomal protein L33
DDAIFOJL_01063 3.1e-207 murB 1.3.1.98 M Cell wall formation
DDAIFOJL_01064 2.1e-266 E aromatic amino acid transport protein AroP K03293
DDAIFOJL_01065 8.3e-59 fdxA C 4Fe-4S binding domain
DDAIFOJL_01066 2e-211 dapC E Aminotransferase class I and II
DDAIFOJL_01068 0.0 E Bacterial extracellular solute-binding proteins, family 5 Middle
DDAIFOJL_01069 1.3e-179 EP Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01070 3e-141 EP Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01071 1.8e-156 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
DDAIFOJL_01072 2.8e-151 dppF E ABC transporter
DDAIFOJL_01073 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
DDAIFOJL_01074 0.0 G Psort location Cytoplasmic, score 8.87
DDAIFOJL_01075 4.1e-233 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
DDAIFOJL_01076 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
DDAIFOJL_01077 8.7e-297 CE10 I Belongs to the type-B carboxylesterase lipase family
DDAIFOJL_01079 4.4e-223 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DDAIFOJL_01080 4.7e-252 M Bacterial capsule synthesis protein PGA_cap
DDAIFOJL_01081 9.4e-186 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DDAIFOJL_01082 2.1e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
DDAIFOJL_01083 1.6e-110
DDAIFOJL_01084 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
DDAIFOJL_01085 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DDAIFOJL_01086 3.4e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
DDAIFOJL_01087 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
DDAIFOJL_01088 1.4e-76 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DDAIFOJL_01089 2e-216 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
DDAIFOJL_01090 5.5e-239 EGP Major facilitator Superfamily
DDAIFOJL_01091 9.5e-197 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
DDAIFOJL_01092 1.6e-182 rhaR_1 K helix_turn_helix, arabinose operon control protein
DDAIFOJL_01093 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DDAIFOJL_01094 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
DDAIFOJL_01095 2.3e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DDAIFOJL_01096 1.4e-116 rplD J Forms part of the polypeptide exit tunnel
DDAIFOJL_01097 6.8e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DDAIFOJL_01098 6.1e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DDAIFOJL_01099 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DDAIFOJL_01100 1.9e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DDAIFOJL_01101 1e-97 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DDAIFOJL_01102 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DDAIFOJL_01103 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
DDAIFOJL_01104 4.9e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DDAIFOJL_01105 3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DDAIFOJL_01106 8.7e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DDAIFOJL_01107 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DDAIFOJL_01108 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DDAIFOJL_01109 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DDAIFOJL_01110 3.8e-96 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DDAIFOJL_01111 3.3e-59 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DDAIFOJL_01112 1.2e-92 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DDAIFOJL_01113 3.4e-25 rpmD J Ribosomal protein L30p/L7e
DDAIFOJL_01114 9.8e-74 rplO J binds to the 23S rRNA
DDAIFOJL_01115 9.9e-239 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DDAIFOJL_01116 2.5e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DDAIFOJL_01117 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DDAIFOJL_01118 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
DDAIFOJL_01119 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DDAIFOJL_01120 1.9e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DDAIFOJL_01121 4.7e-185 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DDAIFOJL_01122 1.3e-66 rplQ J Ribosomal protein L17
DDAIFOJL_01123 4.4e-183 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DDAIFOJL_01124 5.2e-46 E Transglutaminase/protease-like homologues
DDAIFOJL_01126 4.4e-78
DDAIFOJL_01127 6.1e-191 nusA K Participates in both transcription termination and antitermination
DDAIFOJL_01128 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DDAIFOJL_01129 2.2e-69 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DDAIFOJL_01130 2.5e-187 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DDAIFOJL_01131 5.2e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
DDAIFOJL_01132 1.7e-249 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DDAIFOJL_01133 3.8e-108
DDAIFOJL_01135 2.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DDAIFOJL_01136 3.3e-212 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DDAIFOJL_01137 3e-251 T GHKL domain
DDAIFOJL_01138 2.3e-150 T LytTr DNA-binding domain
DDAIFOJL_01139 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
DDAIFOJL_01140 0.0 crr G pts system, glucose-specific IIABC component
DDAIFOJL_01141 2.8e-157 arbG K CAT RNA binding domain
DDAIFOJL_01142 8.3e-199 I Diacylglycerol kinase catalytic domain
DDAIFOJL_01143 9.2e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DDAIFOJL_01145 4.6e-188 yegU O ADP-ribosylglycohydrolase
DDAIFOJL_01146 7e-189 yegV G pfkB family carbohydrate kinase
DDAIFOJL_01147 1.1e-270 U Permease for cytosine/purines, uracil, thiamine, allantoin
DDAIFOJL_01148 1.3e-102 Q Isochorismatase family
DDAIFOJL_01149 2.6e-213 S Choline/ethanolamine kinase
DDAIFOJL_01150 2.5e-275 eat E Amino acid permease
DDAIFOJL_01151 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DDAIFOJL_01152 4.3e-311 abfA1 3.2.1.55 GH51 G arabinose metabolic process
DDAIFOJL_01153 2.2e-246 G Bacterial extracellular solute-binding protein
DDAIFOJL_01154 1.3e-273 G Bacterial extracellular solute-binding protein
DDAIFOJL_01155 1.5e-141 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
DDAIFOJL_01156 4.6e-241 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DDAIFOJL_01157 1.9e-292 E ABC transporter, substrate-binding protein, family 5
DDAIFOJL_01158 4.8e-166 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01159 1.2e-139 EP Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01160 1.4e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
DDAIFOJL_01161 4e-139 sapF E ATPases associated with a variety of cellular activities
DDAIFOJL_01162 2.6e-191 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
DDAIFOJL_01163 3.8e-218 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
DDAIFOJL_01165 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
DDAIFOJL_01166 3.9e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DDAIFOJL_01167 1e-101 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DDAIFOJL_01168 3.1e-270 yhdG E aromatic amino acid transport protein AroP K03293
DDAIFOJL_01169 5.9e-307 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DDAIFOJL_01170 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DDAIFOJL_01171 2e-214 ybiR P Citrate transporter
DDAIFOJL_01173 5.2e-176 ydcZ S Putative inner membrane exporter, YdcZ
DDAIFOJL_01175 0.0 tetP J Elongation factor G, domain IV
DDAIFOJL_01179 7.7e-101 K acetyltransferase
DDAIFOJL_01180 1.1e-108 papP E Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01181 3.6e-120 E Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01182 1.5e-152 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
DDAIFOJL_01183 9e-143 cjaA ET Bacterial periplasmic substrate-binding proteins
DDAIFOJL_01184 1.4e-200 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DDAIFOJL_01185 6.9e-156 metQ M NLPA lipoprotein
DDAIFOJL_01186 6.5e-193 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DDAIFOJL_01187 4.9e-98 metI P Psort location CytoplasmicMembrane, score 9.99
DDAIFOJL_01188 1.1e-222 mtnE 2.6.1.83 E Aminotransferase class I and II
DDAIFOJL_01189 3.2e-75 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
DDAIFOJL_01190 1.4e-43 XAC3035 O Glutaredoxin
DDAIFOJL_01191 3.1e-127 XK27_08050 O prohibitin homologues
DDAIFOJL_01192 1.7e-13 S Domain of unknown function (DUF4143)
DDAIFOJL_01193 4.3e-75
DDAIFOJL_01194 9.6e-135 V ATPases associated with a variety of cellular activities
DDAIFOJL_01195 1.7e-146 M Conserved repeat domain
DDAIFOJL_01196 9.8e-256 macB_8 V MacB-like periplasmic core domain
DDAIFOJL_01197 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DDAIFOJL_01198 1.2e-183 adh3 C Zinc-binding dehydrogenase
DDAIFOJL_01199 1.1e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DDAIFOJL_01200 1.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DDAIFOJL_01201 2.3e-89 zur P Belongs to the Fur family
DDAIFOJL_01202 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
DDAIFOJL_01203 1.4e-201 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
DDAIFOJL_01204 9.1e-189 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
DDAIFOJL_01205 1.3e-128 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
DDAIFOJL_01206 2.1e-213 1.1.1.1 C Iron-containing alcohol dehydrogenase
DDAIFOJL_01207 1.1e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
DDAIFOJL_01208 2.1e-247 EGP Major facilitator Superfamily
DDAIFOJL_01209 2.8e-235 purD 6.3.4.13 F Belongs to the GARS family
DDAIFOJL_01210 8.3e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
DDAIFOJL_01211 1e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DDAIFOJL_01212 2.1e-307 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
DDAIFOJL_01213 1.5e-33
DDAIFOJL_01214 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
DDAIFOJL_01215 4.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
DDAIFOJL_01216 1.1e-228 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DDAIFOJL_01217 6.5e-226 M Glycosyl transferase 4-like domain
DDAIFOJL_01218 4.2e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
DDAIFOJL_01220 8.1e-188 yocS S SBF-like CPA transporter family (DUF4137)
DDAIFOJL_01221 1.2e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DDAIFOJL_01222 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DDAIFOJL_01223 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DDAIFOJL_01224 9.5e-233 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DDAIFOJL_01225 2e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DDAIFOJL_01226 1.8e-75 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DDAIFOJL_01227 4.1e-239 carA 6.3.5.5 F Belongs to the CarA family
DDAIFOJL_01228 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
DDAIFOJL_01229 3.7e-171 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
DDAIFOJL_01230 1.2e-106 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
DDAIFOJL_01232 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
DDAIFOJL_01233 1.4e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DDAIFOJL_01234 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DDAIFOJL_01235 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DDAIFOJL_01236 2.3e-133 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DDAIFOJL_01237 1.1e-178 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DDAIFOJL_01238 1.6e-123 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
DDAIFOJL_01239 1.1e-281 arc O AAA ATPase forming ring-shaped complexes
DDAIFOJL_01240 7.5e-302 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
DDAIFOJL_01241 3.3e-160 hisN 3.1.3.25 G Inositol monophosphatase family
DDAIFOJL_01242 1.4e-24 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
DDAIFOJL_01243 2.6e-280 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
DDAIFOJL_01244 9.7e-141 C FMN binding
DDAIFOJL_01245 1.8e-57
DDAIFOJL_01246 1.4e-41 hup L Belongs to the bacterial histone-like protein family
DDAIFOJL_01247 0.0 S Lysylphosphatidylglycerol synthase TM region
DDAIFOJL_01248 3.6e-279 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
DDAIFOJL_01249 2.7e-277 S PGAP1-like protein
DDAIFOJL_01250 1.3e-62
DDAIFOJL_01251 1.2e-180 S von Willebrand factor (vWF) type A domain
DDAIFOJL_01252 4.7e-191 S von Willebrand factor (vWF) type A domain
DDAIFOJL_01253 6.7e-90
DDAIFOJL_01254 5.5e-175 S Protein of unknown function DUF58
DDAIFOJL_01255 4e-182 moxR S ATPase family associated with various cellular activities (AAA)
DDAIFOJL_01256 4.4e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DDAIFOJL_01257 8.5e-77 S LytR cell envelope-related transcriptional attenuator
DDAIFOJL_01258 8.7e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DDAIFOJL_01260 1.3e-124
DDAIFOJL_01261 2.6e-132 KT Response regulator receiver domain protein
DDAIFOJL_01262 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
DDAIFOJL_01263 4.5e-67 cspB K 'Cold-shock' DNA-binding domain
DDAIFOJL_01264 1.4e-180 S Protein of unknown function (DUF3027)
DDAIFOJL_01265 4.6e-188 uspA T Belongs to the universal stress protein A family
DDAIFOJL_01266 0.0 clpC O ATPase family associated with various cellular activities (AAA)
DDAIFOJL_01267 1.5e-255 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
DDAIFOJL_01268 4.7e-285 purR QT Purine catabolism regulatory protein-like family
DDAIFOJL_01269 9.4e-245 proP EGP Sugar (and other) transporter
DDAIFOJL_01270 1.6e-140 3.5.2.10 S Creatinine amidohydrolase
DDAIFOJL_01271 1.5e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
DDAIFOJL_01272 5.3e-251 hisS 6.1.1.21 J Histidyl-tRNA synthetase
DDAIFOJL_01273 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
DDAIFOJL_01274 2.7e-280 glnP E Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01275 6.7e-139 glnQ 3.6.3.21 E ATPases associated with a variety of cellular activities
DDAIFOJL_01276 4.4e-144 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
DDAIFOJL_01277 6.8e-153 gluB ET Belongs to the bacterial solute-binding protein 3 family
DDAIFOJL_01278 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01279 1e-199 gluD E Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01280 4.3e-191 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
DDAIFOJL_01281 0.0 L DEAD DEAH box helicase
DDAIFOJL_01282 1.1e-248 rarA L Recombination factor protein RarA
DDAIFOJL_01283 1.4e-133 KT Transcriptional regulatory protein, C terminal
DDAIFOJL_01284 1.3e-285 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
DDAIFOJL_01285 0.0 lpqB S Lipoprotein LpqB beta-propeller domain
DDAIFOJL_01286 6.4e-166 G Periplasmic binding protein domain
DDAIFOJL_01287 6e-288 ytfR 3.6.3.17 G ATPases associated with a variety of cellular activities
DDAIFOJL_01288 3.4e-181 ytfT U Branched-chain amino acid transport system / permease component
DDAIFOJL_01289 1.2e-172 yjfF U Branched-chain amino acid transport system / permease component
DDAIFOJL_01290 5.3e-252 EGP Major facilitator Superfamily
DDAIFOJL_01291 0.0 E ABC transporter, substrate-binding protein, family 5
DDAIFOJL_01292 1e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DDAIFOJL_01293 8.6e-125 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DDAIFOJL_01294 6.1e-241 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DDAIFOJL_01297 1.1e-245 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DDAIFOJL_01298 4.8e-117 safC S O-methyltransferase
DDAIFOJL_01299 2e-177 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
DDAIFOJL_01300 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
DDAIFOJL_01301 5.9e-255 dprA 5.99.1.2 LU DNA recombination-mediator protein A
DDAIFOJL_01302 3e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
DDAIFOJL_01303 3.1e-83 yraN L Belongs to the UPF0102 family
DDAIFOJL_01304 1.5e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
DDAIFOJL_01305 5.9e-252 metY 2.5.1.49 E Aminotransferase class-V
DDAIFOJL_01306 4.3e-95 XK27_01265 S ECF-type riboflavin transporter, S component
DDAIFOJL_01307 1.1e-305 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
DDAIFOJL_01308 6.9e-150 P Cobalt transport protein
DDAIFOJL_01309 2.4e-192 K helix_turn_helix ASNC type
DDAIFOJL_01310 5.1e-142 V ABC transporter, ATP-binding protein
DDAIFOJL_01311 0.0 MV MacB-like periplasmic core domain
DDAIFOJL_01312 1.9e-130 K helix_turn_helix, Lux Regulon
DDAIFOJL_01313 0.0 tcsS2 T Histidine kinase
DDAIFOJL_01314 6.8e-264 pip 3.4.11.5 S alpha/beta hydrolase fold
DDAIFOJL_01315 5.3e-139 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DDAIFOJL_01316 3.9e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DDAIFOJL_01317 3.4e-17 yccF S Inner membrane component domain
DDAIFOJL_01318 5.9e-12
DDAIFOJL_01319 2.3e-42 cysB 4.2.1.22 EGP Major facilitator Superfamily
DDAIFOJL_01320 4.5e-26 cysB 4.2.1.22 EGP Major facilitator Superfamily
DDAIFOJL_01321 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
DDAIFOJL_01322 8.9e-198 K helix_turn _helix lactose operon repressor
DDAIFOJL_01323 1.4e-240 mntH P H( )-stimulated, divalent metal cation uptake system
DDAIFOJL_01324 5.5e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
DDAIFOJL_01325 2.1e-116 L Protein of unknown function (DUF1524)
DDAIFOJL_01326 3.4e-244 T Diguanylate cyclase (GGDEF) domain protein
DDAIFOJL_01327 4.7e-285 EGP Major facilitator Superfamily
DDAIFOJL_01328 2.5e-47
DDAIFOJL_01329 1.8e-187 S Endonuclease/Exonuclease/phosphatase family
DDAIFOJL_01330 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
DDAIFOJL_01331 3.9e-86 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
DDAIFOJL_01332 1.3e-177
DDAIFOJL_01333 1.1e-201 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
DDAIFOJL_01334 3.7e-30 GT4 M Psort location Cytoplasmic, score 8.87
DDAIFOJL_01335 4.4e-38 GT4 M Psort location Cytoplasmic, score 8.87
DDAIFOJL_01336 5.6e-183 MA20_17390 GT4 M Glycosyl transferases group 1
DDAIFOJL_01337 1.2e-77 1.13.11.79 C Psort location Cytoplasmic, score 8.87
DDAIFOJL_01338 2.8e-150 rfbX S polysaccharide biosynthetic process
DDAIFOJL_01339 1.1e-163 S Polysaccharide pyruvyl transferase
DDAIFOJL_01341 2.2e-18 L Integrase core domain
DDAIFOJL_01342 8.8e-67
DDAIFOJL_01343 3.2e-88
DDAIFOJL_01344 1.3e-42 L Psort location Cytoplasmic, score 8.87
DDAIFOJL_01345 1.3e-45 L Integrase core domain
DDAIFOJL_01346 8.3e-24 L PFAM Integrase catalytic
DDAIFOJL_01347 3.9e-40 S Protein of unknown function (DUF3800)
DDAIFOJL_01348 3.9e-161 prrC S AAA domain
DDAIFOJL_01349 3.6e-15 sepS16B
DDAIFOJL_01350 5.7e-12 S RES
DDAIFOJL_01351 3e-29 L Transposase, Mutator family
DDAIFOJL_01352 2.2e-90 gepA S Protein of unknown function (DUF4065)
DDAIFOJL_01353 4.1e-73 doc S Fic/DOC family
DDAIFOJL_01354 1.3e-37 S Psort location CytoplasmicMembrane, score 9.99
DDAIFOJL_01355 2.8e-51 S Psort location CytoplasmicMembrane, score 9.99
DDAIFOJL_01356 2.7e-21 S Psort location CytoplasmicMembrane, score 9.99
DDAIFOJL_01357 1.3e-55 yccF S Inner membrane component domain
DDAIFOJL_01358 0.0 3.2.1.177 GH31 G Belongs to the glycosyl hydrolase 31 family
DDAIFOJL_01359 6.6e-145 G Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01360 1.4e-162 G PFAM binding-protein-dependent transport systems inner membrane component
DDAIFOJL_01361 2.3e-223 G Bacterial extracellular solute-binding protein
DDAIFOJL_01362 2.4e-181 K helix_turn _helix lactose operon repressor
DDAIFOJL_01363 1.4e-184 K Psort location Cytoplasmic, score
DDAIFOJL_01364 3e-270 G Bacterial extracellular solute-binding protein
DDAIFOJL_01365 1.9e-161 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01366 6.5e-148 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01367 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
DDAIFOJL_01368 1.5e-243 wcoI DM Psort location CytoplasmicMembrane, score
DDAIFOJL_01369 2.6e-97 3.1.3.48 T Low molecular weight phosphatase family
DDAIFOJL_01370 6.5e-74
DDAIFOJL_01371 1.6e-28 K Cro/C1-type HTH DNA-binding domain
DDAIFOJL_01372 1.9e-71
DDAIFOJL_01373 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
DDAIFOJL_01374 1.8e-158 cps1D M Domain of unknown function (DUF4422)
DDAIFOJL_01375 1.1e-189 2.4.1.166 GT2 M Glycosyltransferase like family 2
DDAIFOJL_01376 1e-254 S Psort location CytoplasmicMembrane, score 9.99
DDAIFOJL_01377 9.9e-286 S Psort location CytoplasmicMembrane, score 9.99
DDAIFOJL_01378 6.7e-206 wbbI M transferase activity, transferring glycosyl groups
DDAIFOJL_01379 1.9e-192 1.13.11.79 C Psort location Cytoplasmic, score 8.87
DDAIFOJL_01380 8e-210 GT2 M Glycosyltransferase like family 2
DDAIFOJL_01381 2.1e-224 C Polysaccharide pyruvyl transferase
DDAIFOJL_01382 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
DDAIFOJL_01383 2.1e-88
DDAIFOJL_01384 5.6e-170 S G5
DDAIFOJL_01385 6e-61 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
DDAIFOJL_01386 3.5e-114 F Domain of unknown function (DUF4916)
DDAIFOJL_01387 3.4e-160 mhpC I Alpha/beta hydrolase family
DDAIFOJL_01388 1e-209 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
DDAIFOJL_01389 7.8e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
DDAIFOJL_01390 1.5e-236 S Uncharacterized conserved protein (DUF2183)
DDAIFOJL_01391 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
DDAIFOJL_01392 8.4e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
DDAIFOJL_01393 2.9e-86 J TM2 domain
DDAIFOJL_01394 2.7e-216 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
DDAIFOJL_01395 5.2e-133 glxR K helix_turn_helix, cAMP Regulatory protein
DDAIFOJL_01396 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
DDAIFOJL_01397 1.4e-220 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
DDAIFOJL_01398 4.4e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
DDAIFOJL_01399 3.4e-141 glpR K DeoR C terminal sensor domain
DDAIFOJL_01400 4e-250 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
DDAIFOJL_01401 7.1e-231 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
DDAIFOJL_01402 3.4e-206 uhpT EGP Major facilitator Superfamily
DDAIFOJL_01403 7.7e-180 alsK 2.7.1.188, 2.7.1.2, 2.7.1.214, 2.7.1.55 GK ROK family
DDAIFOJL_01404 3.2e-95 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
DDAIFOJL_01405 4.4e-23 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
DDAIFOJL_01406 1.2e-230 K ROK family
DDAIFOJL_01407 2.4e-238 lmrB EGP Major facilitator Superfamily
DDAIFOJL_01408 5.5e-43 gcvR T Belongs to the UPF0237 family
DDAIFOJL_01409 5e-254 S UPF0210 protein
DDAIFOJL_01410 4.3e-126 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DDAIFOJL_01411 3.1e-178 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
DDAIFOJL_01412 4.4e-99
DDAIFOJL_01413 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DDAIFOJL_01414 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DDAIFOJL_01415 1.8e-101 T Forkhead associated domain
DDAIFOJL_01416 4.8e-104 B Belongs to the OprB family
DDAIFOJL_01417 4.4e-163 3.1.3.16 T Sigma factor PP2C-like phosphatases
DDAIFOJL_01418 0.0 E Transglutaminase-like superfamily
DDAIFOJL_01419 5.4e-220 S Protein of unknown function DUF58
DDAIFOJL_01420 1.2e-231 S ATPase family associated with various cellular activities (AAA)
DDAIFOJL_01421 0.0 S Fibronectin type 3 domain
DDAIFOJL_01422 1.9e-267 KLT Protein tyrosine kinase
DDAIFOJL_01423 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
DDAIFOJL_01424 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
DDAIFOJL_01425 3.9e-246 G Major Facilitator Superfamily
DDAIFOJL_01426 1.4e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DDAIFOJL_01427 1.1e-38 csoR S Metal-sensitive transcriptional repressor
DDAIFOJL_01428 0.0 pacS 3.6.3.54 P E1-E2 ATPase
DDAIFOJL_01429 9.5e-175 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DDAIFOJL_01430 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DDAIFOJL_01431 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
DDAIFOJL_01432 1e-169
DDAIFOJL_01433 0.0 O Type VII secretion system ESX-1, transport TM domain B
DDAIFOJL_01434 1.3e-225 snm S WXG100 protein secretion system (Wss), protein YukD
DDAIFOJL_01435 1.1e-47 esxU S Proteins of 100 residues with WXG
DDAIFOJL_01436 1.5e-43 S Proteins of 100 residues with WXG
DDAIFOJL_01438 1.1e-264 O Subtilase family
DDAIFOJL_01439 1.3e-175
DDAIFOJL_01440 9.8e-142
DDAIFOJL_01441 3.7e-188
DDAIFOJL_01442 4.4e-55
DDAIFOJL_01443 2.3e-191
DDAIFOJL_01444 9.6e-157 T Forkhead associated domain
DDAIFOJL_01445 0.0 eccCa D FtsK/SpoIIIE family
DDAIFOJL_01446 2.3e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DDAIFOJL_01447 5.2e-116 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DDAIFOJL_01448 7.7e-291 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
DDAIFOJL_01449 1.9e-10
DDAIFOJL_01452 1.4e-56 S Helix-turn-helix domain
DDAIFOJL_01453 1.5e-10 S Helix-turn-helix domain
DDAIFOJL_01457 2e-62 ydhQ 2.7.11.1 MU cell adhesion
DDAIFOJL_01462 1.7e-201 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DDAIFOJL_01463 1.8e-141 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DDAIFOJL_01464 3.2e-101
DDAIFOJL_01465 1.9e-242 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DDAIFOJL_01466 1.4e-250 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DDAIFOJL_01467 2.3e-284 thrC 4.2.3.1 E Threonine synthase N terminus
DDAIFOJL_01468 1.4e-232 EGP Major facilitator Superfamily
DDAIFOJL_01469 8.6e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
DDAIFOJL_01470 6.3e-173 G Fic/DOC family
DDAIFOJL_01471 2.9e-141
DDAIFOJL_01472 6.9e-164 IQ Enoyl-(Acyl carrier protein) reductase
DDAIFOJL_01473 5.3e-167 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DDAIFOJL_01474 1.4e-75 3.4.13.22 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DDAIFOJL_01475 1.9e-95 bcp 1.11.1.15 O Redoxin
DDAIFOJL_01476 2.7e-24 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_01477 1.1e-95 S Pyridoxamine 5'-phosphate oxidase
DDAIFOJL_01478 0.0 S Histidine phosphatase superfamily (branch 2)
DDAIFOJL_01479 1.6e-44 L transposition
DDAIFOJL_01480 2.5e-23 C Acetamidase/Formamidase family
DDAIFOJL_01481 1.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
DDAIFOJL_01482 1.1e-172 V ATPases associated with a variety of cellular activities
DDAIFOJL_01483 2.8e-123 S ABC-2 family transporter protein
DDAIFOJL_01484 8.3e-122 S Haloacid dehalogenase-like hydrolase
DDAIFOJL_01485 5.3e-261 recN L May be involved in recombinational repair of damaged DNA
DDAIFOJL_01486 2e-177 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DDAIFOJL_01487 2.2e-263 trkB P Cation transport protein
DDAIFOJL_01488 3e-116 trkA P TrkA-N domain
DDAIFOJL_01489 2.9e-134 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
DDAIFOJL_01490 1.2e-191 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
DDAIFOJL_01491 1.5e-149 L Tetratricopeptide repeat
DDAIFOJL_01492 5e-251 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DDAIFOJL_01493 0.0 S Protein of unknown function (DUF975)
DDAIFOJL_01494 8.6e-137 S Putative ABC-transporter type IV
DDAIFOJL_01495 9.7e-94 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
DDAIFOJL_01496 1.3e-279 argH 4.3.2.1 E argininosuccinate lyase
DDAIFOJL_01497 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
DDAIFOJL_01498 2.3e-82 argR K Regulates arginine biosynthesis genes
DDAIFOJL_01499 4.6e-185 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DDAIFOJL_01500 2.7e-241 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
DDAIFOJL_01501 2.8e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
DDAIFOJL_01502 1.9e-217 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DDAIFOJL_01503 4.1e-206 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DDAIFOJL_01504 4.9e-99
DDAIFOJL_01505 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
DDAIFOJL_01506 5.9e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DDAIFOJL_01508 3.2e-95 yvdD 3.2.2.10 S Possible lysine decarboxylase
DDAIFOJL_01510 1.5e-17 L HNH endonuclease
DDAIFOJL_01511 2.2e-113 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
DDAIFOJL_01512 5.2e-42 V DNA modification
DDAIFOJL_01513 6.6e-281 glnA 6.3.1.2 E glutamine synthetase
DDAIFOJL_01514 6e-143 S Domain of unknown function (DUF4191)
DDAIFOJL_01515 2.2e-247 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DDAIFOJL_01516 3.6e-93 S Protein of unknown function (DUF3043)
DDAIFOJL_01517 6.8e-251 argE E Peptidase dimerisation domain
DDAIFOJL_01518 3.1e-145 cbiQ P Cobalt transport protein
DDAIFOJL_01519 3.1e-265 ykoD P ATPases associated with a variety of cellular activities
DDAIFOJL_01520 2.2e-84 ykoE S ABC-type cobalt transport system, permease component
DDAIFOJL_01521 2.1e-202 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
DDAIFOJL_01522 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DDAIFOJL_01523 0.0 S Tetratricopeptide repeat
DDAIFOJL_01524 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DDAIFOJL_01525 2.2e-168 2.8.2.22 S Arylsulfotransferase Ig-like domain
DDAIFOJL_01526 5e-145 bioM P ATPases associated with a variety of cellular activities
DDAIFOJL_01527 8.1e-221 E Aminotransferase class I and II
DDAIFOJL_01528 1.6e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
DDAIFOJL_01529 8.2e-201 S Glycosyltransferase, group 2 family protein
DDAIFOJL_01530 1.4e-144 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DDAIFOJL_01531 2.4e-47 yhbY J CRS1_YhbY
DDAIFOJL_01532 0.0 ecfA GP ABC transporter, ATP-binding protein
DDAIFOJL_01533 1.5e-107 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DDAIFOJL_01534 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
DDAIFOJL_01536 1.3e-113 kcsA U Ion channel
DDAIFOJL_01537 8.3e-182 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
DDAIFOJL_01538 1.2e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DDAIFOJL_01539 1.2e-123 3.2.1.8 S alpha beta
DDAIFOJL_01540 3.6e-28
DDAIFOJL_01541 7.2e-186 mcrB L Restriction endonuclease
DDAIFOJL_01543 3.1e-140
DDAIFOJL_01544 0.0 3.4.21.53 O Putative ATP-dependent Lon protease
DDAIFOJL_01545 0.0 thiN 2.7.6.2 H PglZ domain
DDAIFOJL_01546 2.5e-254 lexA 3.6.4.12 K Putative DNA-binding domain
DDAIFOJL_01547 6.4e-75 S Domain of unknown function (DUF4263)
DDAIFOJL_01548 0.0 LV DNA restriction-modification system
DDAIFOJL_01549 0.0 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
DDAIFOJL_01550 7.8e-126 S Domain of unknown function (DUF1788)
DDAIFOJL_01551 9.7e-105 S Putative inner membrane protein (DUF1819)
DDAIFOJL_01552 2.1e-21
DDAIFOJL_01554 1.5e-146 S phosphoesterase or phosphohydrolase
DDAIFOJL_01555 2.7e-40 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
DDAIFOJL_01556 5.2e-22 C Aldo/keto reductase family
DDAIFOJL_01558 4.8e-136 2.7.13.3 T Histidine kinase
DDAIFOJL_01559 1.9e-113 K helix_turn_helix, Lux Regulon
DDAIFOJL_01560 3.3e-208 KLT Lanthionine synthetase C-like protein
DDAIFOJL_01561 1.2e-158 msbA2 3.6.3.44 V ABC transporter transmembrane region
DDAIFOJL_01562 5.1e-159 O Thioredoxin
DDAIFOJL_01563 7.6e-129 E Psort location Cytoplasmic, score 8.87
DDAIFOJL_01564 4.2e-130 yebE S DUF218 domain
DDAIFOJL_01565 1.2e-231 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DDAIFOJL_01566 1.9e-234 rnd 3.1.13.5 J 3'-5' exonuclease
DDAIFOJL_01567 9.9e-80 S Protein of unknown function (DUF3000)
DDAIFOJL_01568 7.4e-166 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DDAIFOJL_01569 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
DDAIFOJL_01570 4.5e-31
DDAIFOJL_01571 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DDAIFOJL_01572 1.8e-225 S Peptidase dimerisation domain
DDAIFOJL_01573 1.7e-156 S Sucrose-6F-phosphate phosphohydrolase
DDAIFOJL_01574 1.6e-146 metQ P NLPA lipoprotein
DDAIFOJL_01575 5.5e-147 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DDAIFOJL_01576 5.4e-108 metI P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01577 1.1e-74
DDAIFOJL_01578 5.1e-16 S Psort location Cytoplasmic, score 8.87
DDAIFOJL_01579 2.4e-101 V Abi-like protein
DDAIFOJL_01580 5e-57 L Helix-turn-helix domain
DDAIFOJL_01582 0.0 S LPXTG-motif cell wall anchor domain protein
DDAIFOJL_01583 3.9e-233 dinF V MatE
DDAIFOJL_01584 3.5e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DDAIFOJL_01585 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DDAIFOJL_01586 8.5e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
DDAIFOJL_01587 1e-47 S Domain of unknown function (DUF4193)
DDAIFOJL_01588 4.1e-147 S Protein of unknown function (DUF3071)
DDAIFOJL_01589 4e-234 S Type I phosphodiesterase / nucleotide pyrophosphatase
DDAIFOJL_01590 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
DDAIFOJL_01591 0.0 lhr L DEAD DEAH box helicase
DDAIFOJL_01592 5.8e-32 yozG K Cro/C1-type HTH DNA-binding domain
DDAIFOJL_01593 5.4e-79 S Protein of unknown function (DUF2975)
DDAIFOJL_01594 2.5e-242 T PhoQ Sensor
DDAIFOJL_01595 1.5e-222 G Major Facilitator Superfamily
DDAIFOJL_01596 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
DDAIFOJL_01597 9.7e-173 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DDAIFOJL_01598 1.1e-118
DDAIFOJL_01599 1.4e-195 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
DDAIFOJL_01600 0.0 pknL 2.7.11.1 KLT PASTA
DDAIFOJL_01601 1.5e-93 EGP Major facilitator Superfamily
DDAIFOJL_01602 2.1e-50 EGP Major facilitator Superfamily
DDAIFOJL_01604 2.9e-64 L Phage integrase, N-terminal SAM-like domain
DDAIFOJL_01605 4.4e-78 L Phage integrase, N-terminal SAM-like domain
DDAIFOJL_01606 1.1e-26
DDAIFOJL_01607 3.8e-183 T regulation of circadian rhythm
DDAIFOJL_01608 8.8e-177 T AAA domain
DDAIFOJL_01610 3.3e-230 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
DDAIFOJL_01611 5.5e-172 S Domain of unknown function (DUF4928)
DDAIFOJL_01613 6.5e-137 L HNH endonuclease
DDAIFOJL_01614 1.9e-172
DDAIFOJL_01615 2.7e-80
DDAIFOJL_01616 1.4e-58
DDAIFOJL_01617 1.4e-298 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
DDAIFOJL_01618 1.2e-09
DDAIFOJL_01619 4e-75
DDAIFOJL_01620 1.3e-257 S AAA domain
DDAIFOJL_01621 3.7e-290 lytC 2.1.1.197, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
DDAIFOJL_01622 5.9e-156 rfbJ M Glycosyl transferase family 2
DDAIFOJL_01623 7e-19 E Carbohydrate esterase, sialic acid-specific acetylesterase
DDAIFOJL_01624 3.5e-168 S Acyltransferase family
DDAIFOJL_01625 3.4e-252
DDAIFOJL_01626 0.0 wbbM M Glycosyl transferase family 8
DDAIFOJL_01627 1.5e-137 ppm1 GT2 M Glycosyl transferase, family 2
DDAIFOJL_01628 2e-68 M Putative cell wall binding repeat 2
DDAIFOJL_01629 1.9e-170 L Protein of unknown function (DUF1524)
DDAIFOJL_01630 0.0 wbbM M Glycosyl transferase family 8
DDAIFOJL_01631 1.9e-126 rgpC U Transport permease protein
DDAIFOJL_01632 6.4e-219 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
DDAIFOJL_01633 3.5e-148 M Belongs to the glycosyl hydrolase 43 family
DDAIFOJL_01634 3.2e-196 1.1.1.22 M UDP binding domain
DDAIFOJL_01635 1.6e-309 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
DDAIFOJL_01636 4e-203 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
DDAIFOJL_01637 1.2e-61
DDAIFOJL_01638 1.8e-195 K helix_turn _helix lactose operon repressor
DDAIFOJL_01639 2.8e-166 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
DDAIFOJL_01640 1.1e-259 EGP Major Facilitator Superfamily
DDAIFOJL_01641 1.3e-174 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DDAIFOJL_01642 1.6e-185 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DDAIFOJL_01643 2.5e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
DDAIFOJL_01644 3.8e-66 ssb1 L Single-stranded DNA-binding protein
DDAIFOJL_01645 3.5e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DDAIFOJL_01646 1.7e-70 rplI J Binds to the 23S rRNA
DDAIFOJL_01648 9.2e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
DDAIFOJL_01649 4.2e-09 M Protein of unknown function (DUF3152)
DDAIFOJL_01650 2.8e-78 M Protein of unknown function (DUF3152)
DDAIFOJL_01651 2.8e-210 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
DDAIFOJL_01652 2.5e-80
DDAIFOJL_01653 6.5e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DDAIFOJL_01654 1.4e-164 fahA Q Fumarylacetoacetate (FAA) hydrolase family
DDAIFOJL_01655 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DDAIFOJL_01656 3e-135 3.6.3.3, 3.6.3.5, 3.6.3.54 P Heavy metal translocating P-type atpase
DDAIFOJL_01657 1.8e-168 rmuC S RmuC family
DDAIFOJL_01658 2.7e-104 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DDAIFOJL_01659 3.1e-133 spoU 2.1.1.185 J RNA methyltransferase TrmH family
DDAIFOJL_01660 6.2e-134 K Psort location Cytoplasmic, score
DDAIFOJL_01661 1.4e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DDAIFOJL_01662 1.1e-286 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DDAIFOJL_01663 8.7e-284 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DDAIFOJL_01664 1e-204 2.3.1.57 J Acetyltransferase (GNAT) domain
DDAIFOJL_01665 2.1e-51 S Protein of unknown function (DUF2469)
DDAIFOJL_01666 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
DDAIFOJL_01667 1.9e-247 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DDAIFOJL_01668 1.3e-79 K helix_turn_helix ASNC type
DDAIFOJL_01669 3e-69 tyrA 5.4.99.5 E Chorismate mutase type II
DDAIFOJL_01670 0.0 S domain protein
DDAIFOJL_01671 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DDAIFOJL_01672 1.9e-289 E Bacterial extracellular solute-binding proteins, family 5 Middle
DDAIFOJL_01673 3.2e-123 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DDAIFOJL_01674 4.9e-134 KT Transcriptional regulatory protein, C terminal
DDAIFOJL_01675 1.9e-133
DDAIFOJL_01676 9.4e-98 mntP P Probably functions as a manganese efflux pump
DDAIFOJL_01677 3.4e-91 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
DDAIFOJL_01678 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
DDAIFOJL_01679 2.1e-174 M LPXTG-motif cell wall anchor domain protein
DDAIFOJL_01680 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
DDAIFOJL_01681 3.9e-193 yfdV S Membrane transport protein
DDAIFOJL_01682 5e-273 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DDAIFOJL_01684 4.5e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DDAIFOJL_01685 2e-146 atpB C it plays a direct role in the translocation of protons across the membrane
DDAIFOJL_01686 8.9e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DDAIFOJL_01687 4.4e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DDAIFOJL_01688 4.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DDAIFOJL_01689 3.8e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DDAIFOJL_01690 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DDAIFOJL_01691 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DDAIFOJL_01692 2.3e-44 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
DDAIFOJL_01693 2.3e-122 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
DDAIFOJL_01694 1.2e-148 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
DDAIFOJL_01695 6.2e-195
DDAIFOJL_01696 2.7e-180
DDAIFOJL_01697 1.9e-170 trxA2 O Tetratricopeptide repeat
DDAIFOJL_01698 4.7e-122 cyaA 4.6.1.1 S CYTH
DDAIFOJL_01700 2.8e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
DDAIFOJL_01701 5e-268 mmuP E amino acid
DDAIFOJL_01702 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
DDAIFOJL_01703 2.7e-299 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DDAIFOJL_01704 1.6e-241 hom 1.1.1.3 E Homoserine dehydrogenase
DDAIFOJL_01705 3.2e-189 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DDAIFOJL_01706 2.4e-286 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
DDAIFOJL_01707 6.2e-210 K helix_turn _helix lactose operon repressor
DDAIFOJL_01708 0.0 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
DDAIFOJL_01709 1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
DDAIFOJL_01710 6.3e-298 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
DDAIFOJL_01711 0.0 fadD 6.2.1.3 I AMP-binding enzyme
DDAIFOJL_01712 0.0 cydD V ABC transporter transmembrane region
DDAIFOJL_01713 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
DDAIFOJL_01714 5.2e-128 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
DDAIFOJL_01715 9.1e-240 G Bacterial extracellular solute-binding protein
DDAIFOJL_01716 5.3e-264 gabT 2.6.1.19, 2.6.1.22 H Aminotransferase class-III
DDAIFOJL_01717 2.3e-139 yidP K UTRA
DDAIFOJL_01718 1.9e-121 degU K helix_turn_helix, Lux Regulon
DDAIFOJL_01719 1.4e-263 tcsS3 KT PspC domain
DDAIFOJL_01720 1.8e-145 pspC KT PspC domain
DDAIFOJL_01721 1.6e-92
DDAIFOJL_01722 7.4e-115 S Protein of unknown function (DUF4125)
DDAIFOJL_01723 0.0 S Domain of unknown function (DUF4037)
DDAIFOJL_01724 1e-210 araJ EGP Major facilitator Superfamily
DDAIFOJL_01726 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
DDAIFOJL_01727 5.6e-203 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
DDAIFOJL_01728 3e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DDAIFOJL_01729 0.0 4.2.1.53 S MCRA family
DDAIFOJL_01730 3.3e-89 phoU P Plays a role in the regulation of phosphate uptake
DDAIFOJL_01731 1.4e-215 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
DDAIFOJL_01732 6.2e-41
DDAIFOJL_01733 8.2e-218 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DDAIFOJL_01734 1.6e-166 usp 3.5.1.28 CBM50 S CHAP domain
DDAIFOJL_01735 1.3e-79 M NlpC/P60 family
DDAIFOJL_01736 1.3e-190 T Universal stress protein family
DDAIFOJL_01737 7.7e-73 attW O OsmC-like protein
DDAIFOJL_01738 3.8e-181 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DDAIFOJL_01739 1.1e-129 folA 1.5.1.3 H dihydrofolate reductase
DDAIFOJL_01740 3.6e-85 ptpA 3.1.3.48 T low molecular weight
DDAIFOJL_01742 7.6e-199 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DDAIFOJL_01743 2.3e-162 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DDAIFOJL_01747 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
DDAIFOJL_01748 1e-157
DDAIFOJL_01749 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
DDAIFOJL_01750 5.4e-283 pelF GT4 M Domain of unknown function (DUF3492)
DDAIFOJL_01751 2.1e-285 pelG S Putative exopolysaccharide Exporter (EPS-E)
DDAIFOJL_01752 3.2e-309 cotH M CotH kinase protein
DDAIFOJL_01753 1.4e-158 P VTC domain
DDAIFOJL_01754 2.2e-111 S Domain of unknown function (DUF4956)
DDAIFOJL_01755 0.0 yliE T Putative diguanylate phosphodiesterase
DDAIFOJL_01756 2e-203 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
DDAIFOJL_01757 5.5e-180 3.4.14.13 M Glycosyltransferase like family 2
DDAIFOJL_01758 1.3e-237 S AI-2E family transporter
DDAIFOJL_01759 6.3e-232 epsG M Glycosyl transferase family 21
DDAIFOJL_01760 6.1e-234 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
DDAIFOJL_01761 8.8e-201 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DDAIFOJL_01762 3.9e-99 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DDAIFOJL_01763 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DDAIFOJL_01764 9.6e-115 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
DDAIFOJL_01765 1.7e-154 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DDAIFOJL_01766 8.3e-274 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DDAIFOJL_01767 6.2e-94 S Protein of unknown function (DUF3180)
DDAIFOJL_01768 5e-165 tesB I Thioesterase-like superfamily
DDAIFOJL_01769 0.0 yjjK S ATP-binding cassette protein, ChvD family
DDAIFOJL_01770 5.9e-182 V Beta-lactamase
DDAIFOJL_01771 9.3e-74 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
DDAIFOJL_01772 6.6e-82 ribD 1.1.1.193, 3.5.4.26 H Cytidine and deoxycytidylate deaminase zinc-binding region
DDAIFOJL_01773 4.1e-155 L PFAM Integrase catalytic
DDAIFOJL_01774 0.0 O Highly conserved protein containing a thioredoxin domain
DDAIFOJL_01775 4.6e-229 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
DDAIFOJL_01776 0.0 3.2.1.8 G Glycosyl hydrolase family 10
DDAIFOJL_01777 2.4e-117 L Integrase core domain
DDAIFOJL_01779 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
DDAIFOJL_01780 6.2e-224 bdhA C Iron-containing alcohol dehydrogenase
DDAIFOJL_01781 2.1e-168 F Inosine-uridine preferring nucleoside hydrolase
DDAIFOJL_01782 2.2e-131 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
DDAIFOJL_01783 5.9e-17 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
DDAIFOJL_01784 5.3e-140 xylR GK ROK family
DDAIFOJL_01785 7.6e-56 xylR GK ROK family
DDAIFOJL_01786 5.8e-95 ykoE S ABC-type cobalt transport system, permease component
DDAIFOJL_01787 1.7e-16 ydcZ S Putative inner membrane exporter, YdcZ
DDAIFOJL_01788 8.3e-35 S Membrane
DDAIFOJL_01789 1.6e-62 S Membrane
DDAIFOJL_01790 2.4e-270 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
DDAIFOJL_01791 1.2e-249 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
DDAIFOJL_01792 8.7e-267 xylA 5.3.1.5 G Belongs to the xylose isomerase family
DDAIFOJL_01793 0.0 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
DDAIFOJL_01794 7.2e-189 K Bacterial regulatory proteins, lacI family
DDAIFOJL_01795 2.4e-242 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
DDAIFOJL_01796 3.4e-186 MA20_14025 U Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01797 2.4e-164 MA20_14020 P Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01798 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
DDAIFOJL_01799 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
DDAIFOJL_01800 2.8e-106 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
DDAIFOJL_01801 3.8e-287 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
DDAIFOJL_01802 6.8e-226 xylR GK ROK family
DDAIFOJL_01804 1.5e-35 rpmE J Binds the 23S rRNA
DDAIFOJL_01805 1.4e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DDAIFOJL_01806 3.2e-172 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DDAIFOJL_01807 2.7e-219 livK E Receptor family ligand binding region
DDAIFOJL_01808 9.5e-156 U Belongs to the binding-protein-dependent transport system permease family
DDAIFOJL_01809 6.7e-196 livM U Belongs to the binding-protein-dependent transport system permease family
DDAIFOJL_01810 4.8e-151 E Branched-chain amino acid ATP-binding cassette transporter
DDAIFOJL_01811 1.9e-124 livF E ATPases associated with a variety of cellular activities
DDAIFOJL_01812 3.8e-114 ywlC 2.7.7.87 J Belongs to the SUA5 family
DDAIFOJL_01813 1.7e-194 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
DDAIFOJL_01814 2.2e-287 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
DDAIFOJL_01815 8.2e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
DDAIFOJL_01816 4.5e-163 supH S Sucrose-6F-phosphate phosphohydrolase
DDAIFOJL_01817 3e-270 recD2 3.6.4.12 L PIF1-like helicase
DDAIFOJL_01818 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DDAIFOJL_01819 3.1e-98 L Single-strand binding protein family
DDAIFOJL_01820 0.0 pepO 3.4.24.71 O Peptidase family M13
DDAIFOJL_01821 1.6e-151 map 3.4.11.18 E Methionine aminopeptidase
DDAIFOJL_01822 5.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
DDAIFOJL_01823 2.2e-142 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
DDAIFOJL_01824 4e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DDAIFOJL_01825 1.1e-190 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DDAIFOJL_01826 2.3e-168 ftsE D Cell division ATP-binding protein FtsE
DDAIFOJL_01827 3.4e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
DDAIFOJL_01828 2.9e-148 usp 3.5.1.28 CBM50 D CHAP domain protein
DDAIFOJL_01829 1e-76 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DDAIFOJL_01830 1.3e-155 pknD ET ABC transporter, substrate-binding protein, family 3
DDAIFOJL_01831 8.9e-32 pknD ET ABC transporter, substrate-binding protein, family 3
DDAIFOJL_01832 6.4e-128 pknD ET ABC transporter, substrate-binding protein, family 3
DDAIFOJL_01833 6.2e-129 yecS E Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01834 8.5e-145 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
DDAIFOJL_01835 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DDAIFOJL_01836 1.8e-144 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
DDAIFOJL_01837 5.3e-229 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
DDAIFOJL_01838 1.4e-189 K Periplasmic binding protein domain
DDAIFOJL_01839 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
DDAIFOJL_01840 0.0 KLT Protein tyrosine kinase
DDAIFOJL_01841 7.5e-151 O Thioredoxin
DDAIFOJL_01843 2.8e-197 S G5
DDAIFOJL_01844 2e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DDAIFOJL_01845 9.6e-169 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DDAIFOJL_01846 2.6e-109 S LytR cell envelope-related transcriptional attenuator
DDAIFOJL_01847 1.7e-284 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
DDAIFOJL_01848 1.8e-121 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
DDAIFOJL_01849 0.0 M Conserved repeat domain
DDAIFOJL_01850 2.1e-305 murJ KLT MviN-like protein
DDAIFOJL_01851 0.0 murJ KLT MviN-like protein
DDAIFOJL_01852 4e-13 S Domain of unknown function (DUF4143)
DDAIFOJL_01853 1.4e-121 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
DDAIFOJL_01854 7e-14 S Psort location Extracellular, score 8.82
DDAIFOJL_01855 3.2e-73 K FCD
DDAIFOJL_01856 6.7e-125 EGP Major facilitator Superfamily
DDAIFOJL_01857 0.0 IQ Peptidase S15
DDAIFOJL_01858 5.1e-167 potA 3.6.3.30, 3.6.3.31 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DDAIFOJL_01859 1.1e-115 potC U Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01860 8.3e-130 U Binding-protein-dependent transport system inner membrane component
DDAIFOJL_01861 1.6e-154 potD E Required for the activity of the bacterial periplasmic transport system of putrescine
DDAIFOJL_01862 7.8e-146 hisC 2.6.1.9 E Aminotransferase class I and II
DDAIFOJL_01863 9.5e-106 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
DDAIFOJL_01864 3.1e-181 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DDAIFOJL_01865 6.2e-204 parB K Belongs to the ParB family
DDAIFOJL_01866 4.5e-172 parA D CobQ CobB MinD ParA nucleotide binding domain protein
DDAIFOJL_01867 1.2e-127 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
DDAIFOJL_01868 3.6e-91 jag S Putative single-stranded nucleic acids-binding domain
DDAIFOJL_01869 6.6e-190 yidC U Membrane protein insertase, YidC Oxa1 family
DDAIFOJL_01870 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
DDAIFOJL_01871 2.9e-306 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DDAIFOJL_01872 1e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DDAIFOJL_01873 1.3e-235 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DDAIFOJL_01874 6.2e-90 S Protein of unknown function (DUF721)
DDAIFOJL_01875 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DDAIFOJL_01876 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DDAIFOJL_01877 3.3e-68 S Transmembrane domain of unknown function (DUF3566)
DDAIFOJL_01878 1.2e-260 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
DDAIFOJL_01879 6.1e-56 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DDAIFOJL_01883 5.2e-101 S Protein of unknown function DUF45
DDAIFOJL_01884 1e-187 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DDAIFOJL_01885 1e-240 ytfL P Transporter associated domain
DDAIFOJL_01886 2e-118 cah 4.2.1.1 P Reversible hydration of carbon dioxide
DDAIFOJL_01887 7e-181
DDAIFOJL_01888 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DDAIFOJL_01889 0.0 yjjP S Threonine/Serine exporter, ThrE
DDAIFOJL_01890 9.4e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DDAIFOJL_01891 5.9e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
DDAIFOJL_01892 1.4e-41 S Protein of unknown function (DUF3073)
DDAIFOJL_01893 6.3e-63 I Sterol carrier protein
DDAIFOJL_01894 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
DDAIFOJL_01895 4.4e-35
DDAIFOJL_01896 1.2e-146 gluP 3.4.21.105 S Rhomboid family
DDAIFOJL_01897 5.3e-237 L ribosomal rna small subunit methyltransferase
DDAIFOJL_01898 1.8e-57 crgA D Involved in cell division
DDAIFOJL_01899 2.6e-141 S Bacterial protein of unknown function (DUF881)
DDAIFOJL_01900 8.7e-209 srtA 3.4.22.70 M Sortase family
DDAIFOJL_01901 1.7e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
DDAIFOJL_01902 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
DDAIFOJL_01903 5.8e-177 T Protein tyrosine kinase
DDAIFOJL_01904 8e-266 pbpA M penicillin-binding protein
DDAIFOJL_01905 5e-271 rodA D Belongs to the SEDS family
DDAIFOJL_01906 2e-241 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
DDAIFOJL_01907 9.6e-73 fhaB T Inner membrane component of T3SS, cytoplasmic domain
DDAIFOJL_01908 1.2e-131 fhaA T Protein of unknown function (DUF2662)
DDAIFOJL_01909 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
DDAIFOJL_01910 2.3e-224 2.7.13.3 T Histidine kinase
DDAIFOJL_01911 3.2e-113 K helix_turn_helix, Lux Regulon
DDAIFOJL_01912 2.3e-193 pldB 3.1.1.5 I Serine aminopeptidase, S33
DDAIFOJL_01913 9.7e-159 yicL EG EamA-like transporter family
DDAIFOJL_01916 1.4e-267 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
DDAIFOJL_01917 3.8e-287 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
DDAIFOJL_01918 0.0 cadA P E1-E2 ATPase
DDAIFOJL_01919 7.9e-188 ansA 3.5.1.1 EJ Asparaginase
DDAIFOJL_01920 3.1e-270 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
DDAIFOJL_01921 4.7e-162 htpX O Belongs to the peptidase M48B family
DDAIFOJL_01923 1.6e-185 K Helix-turn-helix XRE-family like proteins
DDAIFOJL_01924 9.7e-170 yddG EG EamA-like transporter family
DDAIFOJL_01925 0.0 pip S YhgE Pip domain protein
DDAIFOJL_01926 0.0 pip S YhgE Pip domain protein
DDAIFOJL_01927 3.2e-217 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
DDAIFOJL_01928 3.5e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DDAIFOJL_01929 9.8e-155 clcA P Voltage gated chloride channel

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)