ORF_ID e_value Gene_name EC_number CAZy COGs Description
BOCCACLF_00001 3.6e-208 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BOCCACLF_00002 4.2e-198 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BOCCACLF_00003 1.7e-34 yaaA S S4 domain protein YaaA
BOCCACLF_00004 6.6e-191 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BOCCACLF_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BOCCACLF_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BOCCACLF_00007 5e-36 K Helix-turn-helix
BOCCACLF_00008 1.7e-45 rpsF J Binds together with S18 to 16S ribosomal RNA
BOCCACLF_00009 7.9e-60 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BOCCACLF_00010 1.3e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BOCCACLF_00011 6.8e-191 Q Imidazolonepropionase and related amidohydrolases
BOCCACLF_00012 3e-242 E ABC transporter, substratebinding protein
BOCCACLF_00014 2.5e-177 Q Imidazolonepropionase and related amidohydrolases
BOCCACLF_00015 5.3e-239 E ABC transporter, substratebinding protein
BOCCACLF_00016 1.5e-95 tipA K TipAS antibiotic-recognition domain
BOCCACLF_00017 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
BOCCACLF_00018 3.2e-56 rplI J Binds to the 23S rRNA
BOCCACLF_00019 2.2e-241 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
BOCCACLF_00020 3.7e-125 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
BOCCACLF_00021 4.1e-129 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
BOCCACLF_00022 5.1e-69 S NADPH-dependent FMN reductase
BOCCACLF_00023 1.5e-185 yttB EGP Major facilitator Superfamily
BOCCACLF_00024 1.1e-16
BOCCACLF_00026 3e-258 E ABC transporter, substratebinding protein
BOCCACLF_00027 1.1e-15
BOCCACLF_00029 1.5e-81 S Membrane
BOCCACLF_00031 2.8e-131 K response regulator
BOCCACLF_00032 0.0 vicK 2.7.13.3 T Histidine kinase
BOCCACLF_00033 4.5e-188 yycH S YycH protein
BOCCACLF_00034 1.3e-130 yycI S YycH protein
BOCCACLF_00035 5.4e-170 L transposase, IS605 OrfB family
BOCCACLF_00036 7.7e-55 tlpA2 L COGs COG1943 Transposase and inactivated derivatives
BOCCACLF_00037 1.3e-148 vicX 3.1.26.11 S domain protein
BOCCACLF_00038 2.7e-175 htrA 3.4.21.107 O serine protease
BOCCACLF_00039 2.3e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BOCCACLF_00041 1.2e-09 S Mor transcription activator family
BOCCACLF_00042 3.9e-20 S Mor transcription activator family
BOCCACLF_00044 3.8e-08
BOCCACLF_00045 1.8e-16 3.1.3.16 S Protein of unknown function (DUF1643)
BOCCACLF_00049 2e-49 L An automated process has identified a potential problem with this gene model
BOCCACLF_00052 3.5e-55 L Domain of unknown function (DUF927)
BOCCACLF_00054 4e-30 L Recombinase zinc beta ribbon domain
BOCCACLF_00055 1e-111 L Recombinase
BOCCACLF_00056 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_00057 3.1e-151 S AIPR protein
BOCCACLF_00058 2e-15
BOCCACLF_00059 9.8e-58 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
BOCCACLF_00060 1.3e-90 S COG0491 Zn-dependent hydrolases, including glyoxylases
BOCCACLF_00061 2.4e-57 K helix_turn_helix, mercury resistance
BOCCACLF_00062 3.1e-98 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
BOCCACLF_00063 2.8e-82 MA20_42555 K Crp-like helix-turn-helix domain
BOCCACLF_00064 9.3e-81
BOCCACLF_00065 2.1e-76 L Transposase DDE domain group 1
BOCCACLF_00066 2.2e-218 L Transposase
BOCCACLF_00067 5.4e-42
BOCCACLF_00070 1.7e-120 K Transcriptional regulator, AraC family
BOCCACLF_00071 6.4e-263 xynT G MFS/sugar transport protein
BOCCACLF_00072 3.2e-300 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
BOCCACLF_00073 4.3e-231 M domain protein
BOCCACLF_00074 1.7e-143 M Gram-positive pilin subunit D1, N-terminal
BOCCACLF_00075 1.9e-93 3.4.22.70 M Sortase family
BOCCACLF_00076 1.2e-89 srtA 3.4.22.70 M sortase family
BOCCACLF_00077 1.2e-56 M Mycoplasma protein of unknown function, DUF285
BOCCACLF_00078 3.2e-36
BOCCACLF_00079 8.9e-08 M Mycoplasma protein of unknown function, DUF285
BOCCACLF_00080 8.5e-218 L Transposase
BOCCACLF_00081 6.6e-71 M Mycoplasma protein of unknown function, DUF285
BOCCACLF_00082 1.1e-59
BOCCACLF_00083 3.7e-29
BOCCACLF_00084 6.9e-204 LO Uncharacterized conserved protein (DUF2075)
BOCCACLF_00085 1.8e-25
BOCCACLF_00086 4.3e-117 1.1.1.1 C nadph quinone reductase
BOCCACLF_00087 8.8e-41 K Transcriptional
BOCCACLF_00088 7e-87 hchA S DJ-1/PfpI family
BOCCACLF_00089 2.4e-94 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
BOCCACLF_00091 6.4e-177 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BOCCACLF_00092 1e-101 yliE T Putative diguanylate phosphodiesterase
BOCCACLF_00093 7.6e-91 S AAA ATPase domain
BOCCACLF_00095 2.2e-62 K Bacterial regulatory proteins, tetR family
BOCCACLF_00096 4.5e-154 1.1.1.219 GM Male sterility protein
BOCCACLF_00097 2.3e-140 N domain, Protein
BOCCACLF_00099 3.3e-118 N domain, Protein
BOCCACLF_00102 1.2e-57
BOCCACLF_00103 3.1e-305 tetP J elongation factor G
BOCCACLF_00104 1.3e-111 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BOCCACLF_00105 2.4e-16 K Transcriptional regulator
BOCCACLF_00106 1.3e-130 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
BOCCACLF_00107 1e-46 S protein conserved in bacteria
BOCCACLF_00108 9.3e-183 naiP EGP Major facilitator Superfamily
BOCCACLF_00109 4.9e-83 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BOCCACLF_00110 1.9e-83 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BOCCACLF_00111 2.1e-28 croE S sequence-specific DNA binding
BOCCACLF_00112 9.9e-93 E IrrE N-terminal-like domain
BOCCACLF_00113 4.5e-106 tra L Transposase and inactivated derivatives, IS30 family
BOCCACLF_00114 9.6e-164 L Probable transposase
BOCCACLF_00115 6.6e-86 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
BOCCACLF_00116 1.6e-56 K Bacterial regulatory proteins, tetR family
BOCCACLF_00117 5.6e-18 K Transcriptional regulator
BOCCACLF_00118 1.3e-10 S Protein of unknown function (DUF805)
BOCCACLF_00119 5.2e-92 GM NmrA-like family
BOCCACLF_00120 6.1e-44 adhR K MerR, DNA binding
BOCCACLF_00121 7.4e-67 GM NmrA-like family
BOCCACLF_00123 9e-49 C Flavodoxin
BOCCACLF_00124 2.2e-185 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
BOCCACLF_00125 1.5e-112 helD 3.6.4.12 L UvrD/REP helicase N-terminal domain
BOCCACLF_00126 3.1e-11
BOCCACLF_00127 6.2e-24 relB L RelB antitoxin
BOCCACLF_00129 1.8e-216 EGP Major Facilitator Superfamily
BOCCACLF_00130 3.9e-94 GM NAD(P)H-binding
BOCCACLF_00131 1e-08 4.1.1.44 S Carboxymuconolactone decarboxylase family
BOCCACLF_00132 4.7e-42 S Domain of unknown function (DUF4440)
BOCCACLF_00134 1.7e-53 S Bacterial transferase hexapeptide (six repeats)
BOCCACLF_00135 1.9e-159 mleP S Sodium Bile acid symporter family
BOCCACLF_00136 2.8e-49 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
BOCCACLF_00137 3.6e-235 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOCCACLF_00138 1.5e-215 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
BOCCACLF_00139 3.1e-127 mleR K LysR family
BOCCACLF_00140 1.5e-148 S Domain of unknown function (DUF4143)
BOCCACLF_00142 6.2e-08
BOCCACLF_00144 2.4e-140 lsa S ABC transporter
BOCCACLF_00145 4.3e-80 argO S LysE type translocator
BOCCACLF_00146 1.1e-103 draG 3.2.2.24 O ADP-ribosylglycohydrolase
BOCCACLF_00148 7.2e-17 yncA 2.3.1.79 S Maltose acetyltransferase
BOCCACLF_00149 4.6e-57 cadD P Cadmium resistance transporter
BOCCACLF_00150 1.1e-49 gtrA S GtrA-like protein
BOCCACLF_00151 4.9e-240 E Bacterial extracellular solute-binding proteins, family 5 Middle
BOCCACLF_00152 7.9e-42 yjbR S YjbR
BOCCACLF_00153 1.9e-118 qmcA O prohibitin homologues
BOCCACLF_00154 7.3e-42 S protein encoded in hypervariable junctions of pilus gene clusters
BOCCACLF_00155 1.3e-196 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
BOCCACLF_00156 2.6e-256 aldA 1.2.1.21, 1.2.1.22 C Belongs to the aldehyde dehydrogenase family
BOCCACLF_00158 4e-62 dltE S Enoyl-(Acyl carrier protein) reductase
BOCCACLF_00159 2.6e-31 qacC U Quaternary ammonium transporter
BOCCACLF_00160 9e-90 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
BOCCACLF_00161 1.3e-36 S Mor transcription activator family
BOCCACLF_00162 1.1e-87 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
BOCCACLF_00163 6.5e-74 yybC S Protein of unknown function (DUF2798)
BOCCACLF_00164 1.5e-141 ydhO 3.4.14.13 M NlpC/P60 family
BOCCACLF_00165 3e-55 S Protein of unknown function (DUF1097)
BOCCACLF_00166 7.8e-155 L Transposase
BOCCACLF_00167 1.8e-118 KLT Protein kinase domain
BOCCACLF_00168 1.1e-95 V ABC-type multidrug transport system, ATPase and permease components
BOCCACLF_00169 7.8e-155 L Transposase
BOCCACLF_00170 7.3e-07 pepO 3.4.24.71 O Peptidase family M13
BOCCACLF_00171 2.7e-08 L Transposase
BOCCACLF_00172 2.3e-27 L Transposase
BOCCACLF_00173 3.6e-25 L Transposase
BOCCACLF_00174 1e-67 S Protein of unknown function (DUF1097)
BOCCACLF_00175 9.2e-210 preA 1.3.1.1 C 4Fe-4S dicluster domain
BOCCACLF_00176 5.6e-183 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
BOCCACLF_00177 3.1e-122 gspA M family 8
BOCCACLF_00178 1.6e-107 K AraC family transcriptional regulator
BOCCACLF_00179 0.0 rafA 3.2.1.22 G Melibiase
BOCCACLF_00180 5.1e-208 G Alpha galactosidase A
BOCCACLF_00181 2.7e-191 G MFS/sugar transport protein
BOCCACLF_00182 2.3e-07 S Virus attachment protein p12 family
BOCCACLF_00183 5e-271 feoB P transporter of a GTP-driven Fe(2 ) uptake system
BOCCACLF_00184 3.3e-17 feoA P FeoA domain
BOCCACLF_00185 6.9e-131 sufC O FeS assembly ATPase SufC
BOCCACLF_00186 2.5e-146 sufD O FeS assembly protein SufD
BOCCACLF_00187 2.6e-188 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BOCCACLF_00188 5.1e-65 nifU C SUF system FeS assembly protein, NifU family
BOCCACLF_00189 2.5e-256 sufB O assembly protein SufB
BOCCACLF_00190 2.6e-31 yitW S Iron-sulfur cluster assembly protein
BOCCACLF_00191 7.6e-110 hipB K Helix-turn-helix
BOCCACLF_00192 1.5e-88 comP 2.7.13.3 F Sensor histidine kinase
BOCCACLF_00193 1.4e-73 nreC K PFAM regulatory protein LuxR
BOCCACLF_00194 6.2e-10
BOCCACLF_00195 4.4e-62 thiW S Thiamine-precursor transporter protein (ThiW)
BOCCACLF_00197 1.4e-167 ynfM EGP Major facilitator Superfamily
BOCCACLF_00198 1e-50 ygfC K Bacterial regulatory proteins, tetR family
BOCCACLF_00199 4.6e-146 hrtB V ABC transporter permease
BOCCACLF_00200 5.2e-95 devA 3.6.3.25 V ABC transporter, ATP-binding protein
BOCCACLF_00201 9.8e-08
BOCCACLF_00202 1.3e-110 K HTH domain
BOCCACLF_00203 2e-69 K Integron-associated effector binding protein
BOCCACLF_00204 2.6e-88 S GyrI-like small molecule binding domain
BOCCACLF_00205 1.8e-92 hadL 3.8.1.2 S Haloacid dehalogenase-like hydrolase
BOCCACLF_00206 5.1e-215 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
BOCCACLF_00207 9.3e-64
BOCCACLF_00208 7.9e-60 bla2 3.5.2.6 V Beta-lactamase enzyme family
BOCCACLF_00209 2e-146 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BOCCACLF_00210 1.5e-54 K Transcriptional regulator, HxlR family
BOCCACLF_00211 1.7e-18
BOCCACLF_00212 1.2e-192 C Oxidoreductase
BOCCACLF_00214 1.8e-64 K Bacterial regulatory proteins, tetR family
BOCCACLF_00215 2.7e-07
BOCCACLF_00216 5e-29
BOCCACLF_00217 5.1e-192 mdt(A) EGP Major facilitator Superfamily
BOCCACLF_00218 6e-65 K helix_turn_helix, mercury resistance
BOCCACLF_00219 7e-39
BOCCACLF_00220 6.9e-166 P secondary active sulfate transmembrane transporter activity
BOCCACLF_00221 1.6e-70 apt 2.4.2.7 F Phosphoribosyl transferase domain
BOCCACLF_00222 4.9e-304 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
BOCCACLF_00223 7.9e-247 G Major Facilitator
BOCCACLF_00224 7.6e-127 K Transcriptional regulator, LacI family
BOCCACLF_00225 5.8e-257 E ABC transporter, substratebinding protein
BOCCACLF_00226 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BOCCACLF_00227 8.9e-89 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BOCCACLF_00228 2.6e-49 L An automated process has identified a potential problem with this gene model
BOCCACLF_00229 9.8e-33 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BOCCACLF_00230 4.3e-41 S CRISPR-associated protein (Cas_Csn2)
BOCCACLF_00231 3.3e-102 yliE T Putative diguanylate phosphodiesterase
BOCCACLF_00232 2.3e-77 wecD K PFAM GCN5-related N-acetyltransferase
BOCCACLF_00233 4.3e-62 S zinc-ribbon domain
BOCCACLF_00234 1.9e-126 S response to antibiotic
BOCCACLF_00235 3.4e-53 S zinc-ribbon domain
BOCCACLF_00236 7.8e-88 S response to antibiotic
BOCCACLF_00237 4.7e-71 F NUDIX domain
BOCCACLF_00238 7.1e-103 padC Q Phenolic acid decarboxylase
BOCCACLF_00239 7.7e-81 padR K Virulence activator alpha C-term
BOCCACLF_00240 9e-91 3.1.3.48 T Tyrosine phosphatase family
BOCCACLF_00241 5.6e-221 xylP2 G symporter
BOCCACLF_00242 3.1e-89 I alpha/beta hydrolase fold
BOCCACLF_00243 1.6e-167 nlhH_1 I alpha/beta hydrolase fold
BOCCACLF_00244 0.0 treP 2.4.1.64 GH65 G hydrolase, family 65, central catalytic
BOCCACLF_00245 3.4e-11
BOCCACLF_00246 2.1e-162
BOCCACLF_00247 7.5e-120 G Belongs to the phosphoglycerate mutase family
BOCCACLF_00248 8e-25 S Protein of unknown function (DUF2441)
BOCCACLF_00250 2.1e-08
BOCCACLF_00251 1.5e-62 K GNAT family
BOCCACLF_00252 3.1e-42 sugE P Multidrug resistance protein
BOCCACLF_00253 2.9e-43 ykkC P Small Multidrug Resistance protein
BOCCACLF_00254 1.5e-179 gldA 1.1.1.6 C dehydrogenase
BOCCACLF_00256 3.2e-161 scrK 2.7.1.2, 2.7.1.4 GK ROK family
BOCCACLF_00257 7.1e-173 tdh 1.1.1.14 C Zinc-binding dehydrogenase
BOCCACLF_00258 1.9e-125 S Membrane
BOCCACLF_00259 3.6e-64 4.4.1.5 E Glyoxalase
BOCCACLF_00260 1.1e-96 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
BOCCACLF_00262 5.7e-151 K helix_turn _helix lactose operon repressor
BOCCACLF_00264 2.6e-161 rihA F Inosine-uridine preferring nucleoside hydrolase
BOCCACLF_00265 1.7e-63 yoaK S Protein of unknown function (DUF1275)
BOCCACLF_00266 1.2e-18
BOCCACLF_00267 3.4e-78 M Mycoplasma protein of unknown function, DUF285
BOCCACLF_00268 8.9e-256 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
BOCCACLF_00269 1.4e-143 yfiQ I Acyltransferase family
BOCCACLF_00270 7.2e-185 6.2.1.3, 6.2.1.8 IQ AMP-binding enzyme C-terminal domain
BOCCACLF_00271 3.4e-111 ssuA P NMT1-like family
BOCCACLF_00272 5.4e-118 KT Putative sugar diacid recognition
BOCCACLF_00273 1.8e-85 serA 1.1.1.399, 1.1.1.95 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BOCCACLF_00274 9.4e-32 tabA G Domain of unknown function (DUF386)
BOCCACLF_00275 1.2e-125 P Psort location CytoplasmicMembrane, score 10.00
BOCCACLF_00276 1.8e-132 garR 1.1.1.60 I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
BOCCACLF_00277 1.3e-222 gudD 4.2.1.40 M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BOCCACLF_00278 1.7e-117 4.3.3.7 EM Dihydrodipicolinate synthetase family
BOCCACLF_00279 2.1e-112 tadA 2.7.1.165 G Belongs to the glycerate kinase type-1 family
BOCCACLF_00280 7.5e-84 MA20_03535 1.1.1.399, 1.1.1.95 C D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BOCCACLF_00281 3.3e-79 K helix_turn_helix, mercury resistance
BOCCACLF_00282 4.2e-89 rocF 3.5.3.1, 3.5.3.11 E Belongs to the arginase family
BOCCACLF_00283 4.8e-78 ssuB P ATPases associated with a variety of cellular activities
BOCCACLF_00284 3.8e-116 ssuC U Binding-protein-dependent transport system inner membrane component
BOCCACLF_00285 1.1e-189 M NlpC/P60 family
BOCCACLF_00286 2.4e-125 G Peptidase_C39 like family
BOCCACLF_00287 1.2e-79 S Cysteine-rich secretory protein family
BOCCACLF_00288 6.4e-133 4.2.1.6 M Mandelate racemase muconate lactonizing enzyme
BOCCACLF_00289 2.7e-185 E ABC transporter, substratebinding protein
BOCCACLF_00290 1.3e-83 pncA Q Isochorismatase family
BOCCACLF_00291 3e-49 K Helix-turn-helix domain
BOCCACLF_00293 5.1e-50
BOCCACLF_00294 5.6e-47 K Transcriptional regulator PadR-like family
BOCCACLF_00295 2e-64 XK27_06920 S Protein of unknown function (DUF1700)
BOCCACLF_00296 6.4e-46 S Putative adhesin
BOCCACLF_00297 2.3e-171 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BOCCACLF_00298 6.8e-162 fabV 1.3.1.44, 1.3.1.9 I NAD(P)H binding domain of trans-2-enoyl-CoA reductase
BOCCACLF_00299 1.7e-71 S regulation of response to stimulus
BOCCACLF_00300 1.7e-65 fld C Flavodoxin
BOCCACLF_00301 1.9e-84 K Acetyltransferase (GNAT) domain
BOCCACLF_00302 1.6e-228 yifK E Amino acid permease
BOCCACLF_00303 2.6e-91
BOCCACLF_00304 5.2e-173 XK27_00720 S Leucine-rich repeat (LRR) protein
BOCCACLF_00305 2.1e-190 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
BOCCACLF_00306 1.7e-97 mta K helix_turn_helix, mercury resistance
BOCCACLF_00307 7e-130 C Zinc-binding dehydrogenase
BOCCACLF_00308 2e-42 lrpA K AsnC family
BOCCACLF_00309 6.9e-138 opuBA E ABC transporter, ATP-binding protein
BOCCACLF_00310 1.7e-250 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
BOCCACLF_00311 7e-185 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
BOCCACLF_00312 1.8e-113 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
BOCCACLF_00313 2.5e-111 ugpA U Binding-protein-dependent transport system inner membrane component
BOCCACLF_00314 8.2e-119 ugpE G ABC transporter permease
BOCCACLF_00315 3.1e-179 ugpB G Bacterial extracellular solute-binding protein
BOCCACLF_00316 1.4e-95 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
BOCCACLF_00317 8.2e-52 K helix_turn_helix, mercury resistance
BOCCACLF_00318 4e-99 1.1.1.219 GM Male sterility protein
BOCCACLF_00319 1.1e-66 S NADPH-dependent FMN reductase
BOCCACLF_00320 1.4e-57 K MarR family
BOCCACLF_00321 1.2e-23 S Peptidase propeptide and YPEB domain
BOCCACLF_00322 4.6e-145 phnD P Phosphonate ABC transporter
BOCCACLF_00323 1.5e-106 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BOCCACLF_00324 1.5e-117 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
BOCCACLF_00325 2.6e-117 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
BOCCACLF_00326 4.3e-209 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
BOCCACLF_00327 1.4e-93 1.6.5.5 C Zinc-binding dehydrogenase
BOCCACLF_00328 0.0 pacL1 P P-type ATPase
BOCCACLF_00329 3.5e-250 pipD E Dipeptidase
BOCCACLF_00330 6.7e-107
BOCCACLF_00331 1.1e-71 K helix_turn_helix, arabinose operon control protein
BOCCACLF_00332 7.8e-283 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
BOCCACLF_00333 4.3e-170 G Major Facilitator
BOCCACLF_00334 8.3e-118 G MFS/sugar transport protein
BOCCACLF_00335 2.7e-259 3.2.1.23 G Beta-galactosidase trimerisation domain
BOCCACLF_00336 2e-28 K AraC-like ligand binding domain
BOCCACLF_00337 2.2e-218 L Transposase
BOCCACLF_00338 1.1e-23 K helix_turn_helix, arabinose operon control protein
BOCCACLF_00339 2.8e-81 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
BOCCACLF_00340 9.7e-79 tauB P ABC transporter
BOCCACLF_00341 6.3e-129 M1-596 P NMT1/THI5 like
BOCCACLF_00342 1.8e-88 ssuC_1 P Binding-protein-dependent transport system inner membrane component
BOCCACLF_00343 3.8e-95 S Elongation factor G-binding protein, N-terminal
BOCCACLF_00344 1.6e-139 EG EamA-like transporter family
BOCCACLF_00345 1e-309 copB 3.6.3.4 P P-type ATPase
BOCCACLF_00346 1.1e-56 copR K Copper transport repressor CopY TcrY
BOCCACLF_00347 2e-34 K sequence-specific DNA binding
BOCCACLF_00348 9e-175 C Oxidoreductase
BOCCACLF_00349 3.5e-94 K Transcriptional regulator, LysR family
BOCCACLF_00350 3.3e-167 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BOCCACLF_00351 0.0 ylbB V ABC transporter permease
BOCCACLF_00352 3.6e-235 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOCCACLF_00353 2.3e-33 ylbB V ABC transporter permease
BOCCACLF_00354 1.4e-111 macB V ABC transporter, ATP-binding protein
BOCCACLF_00355 1.1e-20 S Uncharacterized protein conserved in bacteria (DUF2255)
BOCCACLF_00356 3.3e-139 S reductase
BOCCACLF_00357 3.4e-138 S Hydrolases of the alpha beta superfamily
BOCCACLF_00358 9.1e-80 S transferase hexapeptide repeat
BOCCACLF_00359 6.9e-132 K Transcriptional regulator
BOCCACLF_00360 3.1e-41 S Uncharacterized protein conserved in bacteria (DUF2255)
BOCCACLF_00361 7.9e-13 adhR K MerR, DNA binding
BOCCACLF_00362 2.8e-109 yvgN 1.1.1.346 S reductase
BOCCACLF_00363 3.6e-77 GM NmrA-like family
BOCCACLF_00364 4.9e-136 4.1.1.45 S Amidohydrolase
BOCCACLF_00365 2.3e-139 yajO C Aldo/keto reductase family
BOCCACLF_00366 7.4e-108 tas 1.1.1.65 C Aldo keto reductase
BOCCACLF_00367 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_00368 4.2e-45 higA K Helix-turn-helix XRE-family like proteins
BOCCACLF_00369 2.7e-252 XK27_11280 S Psort location CytoplasmicMembrane, score
BOCCACLF_00370 4.2e-63 yciB M ErfK YbiS YcfS YnhG
BOCCACLF_00372 1.5e-107 yxkH G Polysaccharide deacetylase
BOCCACLF_00373 5e-132 xerD L Phage integrase, N-terminal SAM-like domain
BOCCACLF_00374 9.5e-34
BOCCACLF_00375 4.6e-159 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BOCCACLF_00376 2.1e-298 oatA I Acyltransferase
BOCCACLF_00377 5.1e-80
BOCCACLF_00378 2.9e-16 3.6.4.13, 5.4.99.21 NU translation initiation factor activity
BOCCACLF_00380 1.7e-307 lai 4.2.1.53 S Myosin-crossreactive antigen
BOCCACLF_00382 2.3e-83 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BOCCACLF_00383 3.4e-62 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
BOCCACLF_00384 2e-50 K Transcriptional regulator PadR-like family
BOCCACLF_00385 1.8e-84 S Putative adhesin
BOCCACLF_00386 1.4e-21
BOCCACLF_00387 6.5e-88 K helix_turn_helix multiple antibiotic resistance protein
BOCCACLF_00388 4.9e-09 K helix_turn_helix multiple antibiotic resistance protein
BOCCACLF_00389 1.8e-15 relB L Addiction module antitoxin, RelB DinJ family
BOCCACLF_00390 7.4e-19 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
BOCCACLF_00392 7.6e-207 xylP1 G MFS/sugar transport protein
BOCCACLF_00393 2e-86 S Protein of unknown function (DUF1440)
BOCCACLF_00394 0.0 uvrA2 L ABC transporter
BOCCACLF_00395 2.8e-75 cdaR KT Purine catabolism regulatory protein-like family
BOCCACLF_00396 1.1e-164 EGP Major facilitator Superfamily
BOCCACLF_00397 7e-109 udp 2.4.2.3, 3.2.2.4 F Phosphorylase superfamily
BOCCACLF_00398 5.4e-175 EGP Major facilitator Superfamily
BOCCACLF_00399 6.9e-135 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
BOCCACLF_00400 8.4e-53 S Tautomerase enzyme
BOCCACLF_00401 9.4e-35 azoR I oxidoreductase activity, acting on other nitrogenous compounds as donors
BOCCACLF_00402 1.1e-43 K Transcriptional regulator GntR family
BOCCACLF_00403 4.8e-181
BOCCACLF_00404 5.2e-41 S Leucine-rich repeat (LRR) protein
BOCCACLF_00405 2.2e-09 S WxL domain surface cell wall-binding
BOCCACLF_00406 6.9e-102 S Cell surface protein
BOCCACLF_00408 9.6e-42
BOCCACLF_00409 3.4e-24 S WxL domain surface cell wall-binding
BOCCACLF_00410 3.8e-61 S Cell surface protein
BOCCACLF_00411 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_00414 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_00415 1e-194 patB 4.4.1.8 E Aminotransferase, class I
BOCCACLF_00416 2.3e-95 M Protein of unknown function (DUF3737)
BOCCACLF_00418 8.9e-279 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BOCCACLF_00419 4e-142 ykoT GT2 M Glycosyl transferase family 2
BOCCACLF_00420 1.5e-92 IQ KR domain
BOCCACLF_00421 6.6e-247 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
BOCCACLF_00422 1.4e-211 M hydrolase, family 25
BOCCACLF_00423 1.4e-81
BOCCACLF_00424 4.6e-82 cobT 2.4.2.21, 6.3.5.11, 6.3.5.9 F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
BOCCACLF_00425 8.5e-186 yubA S AI-2E family transporter
BOCCACLF_00426 8.2e-122 yclI V FtsX-like permease family
BOCCACLF_00427 1.5e-102 yclH V ABC transporter
BOCCACLF_00428 5.7e-229 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
BOCCACLF_00429 1.1e-258 malL 3.2.1.10, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31 G Alpha amylase, catalytic domain protein
BOCCACLF_00430 3e-57 K Winged helix DNA-binding domain
BOCCACLF_00431 2.5e-140 corA P CorA-like Mg2+ transporter protein
BOCCACLF_00433 2.9e-310 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
BOCCACLF_00434 5.4e-37 rmaI K Transcriptional regulator
BOCCACLF_00435 1.9e-192 EGP Major facilitator Superfamily
BOCCACLF_00436 3.1e-53
BOCCACLF_00437 1.1e-34 tlpA2 L Transposase IS200 like
BOCCACLF_00438 2.4e-173 L transposase, IS605 OrfB family
BOCCACLF_00439 4.8e-38
BOCCACLF_00440 3.8e-177 T PhoQ Sensor
BOCCACLF_00441 1.4e-122 K Transcriptional regulatory protein, C terminal
BOCCACLF_00443 6.5e-95 ylbE GM NAD(P)H-binding
BOCCACLF_00444 3.1e-207 ndh 1.6.99.3 C NADH dehydrogenase
BOCCACLF_00445 1.2e-70 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BOCCACLF_00446 2.1e-97 K Bacterial regulatory proteins, tetR family
BOCCACLF_00447 3.3e-240 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
BOCCACLF_00448 6.2e-121 IQ reductase
BOCCACLF_00449 1.3e-45 rimL J Acetyltransferase (GNAT) domain
BOCCACLF_00450 4.3e-229 mntH P H( )-stimulated, divalent metal cation uptake system
BOCCACLF_00451 1.8e-132 S Uncharacterised protein, DegV family COG1307
BOCCACLF_00452 1.7e-87 dedA1 S SNARE associated Golgi protein
BOCCACLF_00453 4.5e-242 nox C NADH oxidase
BOCCACLF_00454 9.1e-53 trxA1 O Belongs to the thioredoxin family
BOCCACLF_00455 3.8e-33 yrkD S Metal-sensitive transcriptional repressor
BOCCACLF_00456 1.8e-34 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BOCCACLF_00457 2.1e-26 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BOCCACLF_00458 1.1e-91 M1-1017
BOCCACLF_00459 3.4e-151 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BOCCACLF_00460 4.1e-86 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BOCCACLF_00461 2.6e-136
BOCCACLF_00462 3.6e-138
BOCCACLF_00464 1.5e-39
BOCCACLF_00465 1.4e-26 U Preprotein translocase subunit SecB
BOCCACLF_00466 1.7e-20 S Mor transcription activator family
BOCCACLF_00467 1.7e-22 S Mor transcription activator family
BOCCACLF_00468 1.1e-102 bla1 3.5.2.6 V Beta-lactamase enzyme family
BOCCACLF_00469 4.7e-07 yefM 2.3.1.15 D toxin-antitoxin pair type II binding
BOCCACLF_00470 4.1e-114 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BOCCACLF_00471 7.6e-183 pts14C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BOCCACLF_00472 6e-147 S Alpha/beta hydrolase of unknown function (DUF915)
BOCCACLF_00473 1.1e-137 lysR5 K LysR substrate binding domain
BOCCACLF_00474 3.7e-138 yxaA S membrane transporter protein
BOCCACLF_00475 4.2e-46 ywjH S Protein of unknown function (DUF1634)
BOCCACLF_00476 1.3e-203 mdtG EGP Major facilitator Superfamily
BOCCACLF_00477 6.1e-96 2.7.6.5 S RelA SpoT domain protein
BOCCACLF_00479 8.7e-65 cadD P Cadmium resistance transporter
BOCCACLF_00480 3.8e-25 S Protein of unknown function (DUF2929)
BOCCACLF_00481 2.5e-156 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
BOCCACLF_00482 0.0 S membrane
BOCCACLF_00483 6.9e-119 K cheY-homologous receiver domain
BOCCACLF_00484 3.7e-193 ciaH 2.7.13.3 T His Kinase A (phosphoacceptor) domain
BOCCACLF_00485 9.2e-162 malR K Transcriptional regulator, LacI family
BOCCACLF_00486 1.7e-241 malT G Major Facilitator
BOCCACLF_00487 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
BOCCACLF_00488 3.6e-13 N PFAM Uncharacterised protein family UPF0150
BOCCACLF_00489 9.5e-23 K LysR substrate binding domain
BOCCACLF_00490 7.2e-106 1.3.1.9 S enoyl- acyl-carrier-protein reductase II
BOCCACLF_00491 2.3e-51
BOCCACLF_00492 8.9e-20
BOCCACLF_00493 1.2e-37 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BOCCACLF_00495 3.8e-153 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
BOCCACLF_00496 7.8e-93 S Alpha/beta hydrolase of unknown function (DUF915)
BOCCACLF_00497 2.2e-116 3.1.3.102, 3.1.3.104 S hydrolase
BOCCACLF_00498 1.1e-60 K MarR family
BOCCACLF_00499 3.4e-245 yclG M Parallel beta-helix repeats
BOCCACLF_00508 5.9e-19 S response to antibiotic
BOCCACLF_00509 2.2e-67 spx4 1.20.4.1 P ArsC family
BOCCACLF_00510 1.1e-120 iap CBM50 M NlpC/P60 family
BOCCACLF_00511 4.2e-103 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
BOCCACLF_00512 3.8e-114 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 M Leucine-rich repeat (LRR) protein
BOCCACLF_00513 9.4e-71 L TatD related DNase
BOCCACLF_00514 3e-78 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
BOCCACLF_00515 1.3e-87 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
BOCCACLF_00516 2e-87 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
BOCCACLF_00517 6.1e-38 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
BOCCACLF_00518 1.1e-16 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 M Leucine-rich repeat (LRR) protein
BOCCACLF_00519 5e-189 E dipeptidase activity
BOCCACLF_00520 9.5e-98 S membrane transporter protein
BOCCACLF_00521 1.3e-96 IQ Enoyl-(Acyl carrier protein) reductase
BOCCACLF_00522 1.3e-85
BOCCACLF_00523 1.6e-90 S Psort location Cytoplasmic, score
BOCCACLF_00524 7.2e-117 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
BOCCACLF_00525 4.3e-126 1.6.5.2 GM NmrA-like family
BOCCACLF_00526 1.3e-49 K Transcriptional regulator
BOCCACLF_00527 4.7e-08
BOCCACLF_00528 4.2e-59 K HxlR-like helix-turn-helix
BOCCACLF_00529 2.6e-177 ytbD EGP Major facilitator Superfamily
BOCCACLF_00530 1.5e-127 XK27_00720 S Leucine-rich repeat (LRR) protein
BOCCACLF_00531 1.9e-81 K Transcriptional regulator
BOCCACLF_00532 9.3e-19
BOCCACLF_00533 2.3e-149 S Aldo keto reductase
BOCCACLF_00534 9.6e-130 cysA V ABC transporter, ATP-binding protein
BOCCACLF_00535 1.4e-243 Q FtsX-like permease family
BOCCACLF_00536 4.3e-51 gntR1 K Transcriptional regulator, GntR family
BOCCACLF_00537 7.5e-57 S Iron-sulphur cluster biosynthesis
BOCCACLF_00538 5.4e-14 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
BOCCACLF_00539 3.5e-114 sdrF M Collagen binding domain
BOCCACLF_00540 3.4e-08 L RelB antitoxin
BOCCACLF_00541 3.2e-17 S ParE toxin of type II toxin-antitoxin system, parDE
BOCCACLF_00542 2.3e-267 cadA P P-type ATPase
BOCCACLF_00543 7.5e-291 mco Q Multicopper oxidase
BOCCACLF_00544 4.4e-42 czrA K Transcriptional regulator, ArsR family
BOCCACLF_00545 1e-89 P Cadmium resistance transporter
BOCCACLF_00546 2.8e-148 MA20_14895 S Conserved hypothetical protein 698
BOCCACLF_00547 1.2e-115 K LysR substrate binding domain
BOCCACLF_00548 1.4e-188 norA EGP Major facilitator Superfamily
BOCCACLF_00549 6.4e-122 K helix_turn_helix, arabinose operon control protein
BOCCACLF_00550 2.9e-293 ybiT S ABC transporter, ATP-binding protein
BOCCACLF_00551 9.8e-86 L Resolvase, N-terminal
BOCCACLF_00552 2.4e-144 tnpB L Putative transposase DNA-binding domain
BOCCACLF_00554 2.2e-120 ydcZ S Putative inner membrane exporter, YdcZ
BOCCACLF_00555 2e-161 xopQ 3.2.2.1, 3.2.2.8 F inosine-uridine preferring nucleoside hydrolase
BOCCACLF_00556 3.3e-85 ydjP I Alpha/beta hydrolase family
BOCCACLF_00557 2e-16
BOCCACLF_00558 1.8e-256 2.8.2.22 M Arylsulfotransferase Ig-like domain
BOCCACLF_00559 3.4e-79 S Protein of unknown function (DUF975)
BOCCACLF_00560 6.7e-52 ytrA K helix_turn_helix gluconate operon transcriptional repressor
BOCCACLF_00561 1.4e-124 ytrB V ABC transporter, ATP-binding protein
BOCCACLF_00562 1.6e-94
BOCCACLF_00563 2.8e-154 ydbT S Bacterial PH domain
BOCCACLF_00564 1.4e-62 S Bacterial PH domain
BOCCACLF_00565 4.3e-74 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
BOCCACLF_00567 4.3e-78 U Belongs to the purine-cytosine permease (2.A.39) family
BOCCACLF_00568 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_00569 4.3e-140 U Belongs to the purine-cytosine permease (2.A.39) family
BOCCACLF_00570 6.4e-47 sigM K Sigma-70 region 2
BOCCACLF_00571 1.1e-79 S Sigma factor regulator C-terminal
BOCCACLF_00572 7.8e-107 icaB G Polysaccharide deacetylase
BOCCACLF_00574 8.9e-170 icaA GT2 M Glycosyl transferase
BOCCACLF_00575 2e-25
BOCCACLF_00576 3.1e-201 frvR K Mga helix-turn-helix domain
BOCCACLF_00577 4.1e-208 S Uncharacterized protein conserved in bacteria (DUF2252)
BOCCACLF_00578 6.6e-36 K Winged helix DNA-binding domain
BOCCACLF_00579 1.5e-156 L Transposase, IS116 IS110 IS902 family
BOCCACLF_00580 5.8e-09
BOCCACLF_00581 4.7e-220 mntH P H( )-stimulated, divalent metal cation uptake system
BOCCACLF_00582 1.2e-225 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BOCCACLF_00583 2.3e-216 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
BOCCACLF_00584 2.1e-97 ahpC 1.11.1.15 O Peroxiredoxin
BOCCACLF_00585 3.1e-43
BOCCACLF_00586 5.5e-94 ylbE GM NAD(P)H-binding
BOCCACLF_00587 1.2e-34
BOCCACLF_00588 4.2e-29 K Bacterial regulatory proteins, tetR family
BOCCACLF_00589 7.8e-147 C Oxidoreductase
BOCCACLF_00590 4.5e-53 K Helix-turn-helix XRE-family like proteins
BOCCACLF_00591 4.1e-23 K Helix-turn-helix XRE-family like proteins
BOCCACLF_00592 3.8e-25 K Helix-turn-helix domain
BOCCACLF_00593 1.1e-267 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BOCCACLF_00594 1.3e-13 MA20_42555 T helix_turn_helix, cAMP Regulatory protein
BOCCACLF_00595 1.1e-66 IQ Dehydrogenase
BOCCACLF_00596 7.9e-53 L Transposase
BOCCACLF_00597 5.9e-12 K Helix-turn-helix domain
BOCCACLF_00598 5.4e-18
BOCCACLF_00599 1.5e-132 L Transposase
BOCCACLF_00600 1.3e-279 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BOCCACLF_00601 2e-109 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
BOCCACLF_00602 2.1e-141 1.1.1.65 C Aldo keto reductase
BOCCACLF_00603 9e-70
BOCCACLF_00605 7.9e-311 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
BOCCACLF_00606 1.7e-86 dps P Belongs to the Dps family
BOCCACLF_00607 8.9e-31 copZ P Heavy-metal-associated domain
BOCCACLF_00608 1.7e-26 copZ P Heavy-metal-associated domain
BOCCACLF_00609 5.3e-180 yttB EGP Major facilitator Superfamily
BOCCACLF_00610 1.3e-79 S AAA domain, putative AbiEii toxin, Type IV TA system
BOCCACLF_00611 3.3e-98 nfrA 1.5.1.39 C nitroreductase
BOCCACLF_00612 2.8e-71 nrdI F Belongs to the NrdI family
BOCCACLF_00613 2e-203 S ATPases associated with a variety of cellular activities
BOCCACLF_00614 1.6e-234 lmrB EGP Major facilitator Superfamily
BOCCACLF_00615 2.6e-129 mleP3 S Membrane transport protein
BOCCACLF_00618 1.6e-96 GM NmrA-like family
BOCCACLF_00619 1.8e-32 E alcohol dehydrogenase
BOCCACLF_00620 1.5e-17 K Bacterial regulatory helix-turn-helix protein, lysR family
BOCCACLF_00621 8.9e-227 yhdP S Transporter associated domain
BOCCACLF_00622 1.7e-47
BOCCACLF_00623 6.5e-30 S Antitoxin component of a toxin-antitoxin (TA) module
BOCCACLF_00624 3.9e-24
BOCCACLF_00625 5.1e-64 hsp O Belongs to the small heat shock protein (HSP20) family
BOCCACLF_00626 1.3e-250 yjeM E Amino Acid
BOCCACLF_00627 1.6e-141 ytbE 1.1.1.346 S Aldo keto reductase
BOCCACLF_00629 0.0 yfgQ P E1-E2 ATPase
BOCCACLF_00630 1.7e-88 M1-874 K Domain of unknown function (DUF1836)
BOCCACLF_00631 3.3e-15 chpR T PFAM SpoVT AbrB
BOCCACLF_00632 1.1e-27 S RelB antitoxin
BOCCACLF_00633 6.5e-286 glpQ 3.1.4.46 C phosphodiesterase
BOCCACLF_00634 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BOCCACLF_00635 3.3e-43 M LysM domain protein
BOCCACLF_00637 4.9e-34 M LysM domain protein
BOCCACLF_00638 1e-49 M LysM domain
BOCCACLF_00639 5.6e-193 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BOCCACLF_00640 3.1e-46 S Alpha/beta hydrolase family
BOCCACLF_00641 2.8e-42 DR0488 S 3D domain
BOCCACLF_00643 1.1e-204 M Exporter of polyketide antibiotics
BOCCACLF_00644 3.9e-138 yjjC V ABC transporter
BOCCACLF_00645 1.4e-57 bm3R1 K Bacterial regulatory proteins, tetR family
BOCCACLF_00646 2.4e-105 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
BOCCACLF_00647 2.5e-208 EGP Major facilitator Superfamily
BOCCACLF_00648 6.6e-103 hisK 3.1.3.15 E Histidinol phosphate phosphatase, HisJ
BOCCACLF_00649 3.1e-108 hisK 3.1.3.15 E Histidinol phosphate phosphatase, HisJ
BOCCACLF_00650 2.1e-119 potA_1 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BOCCACLF_00651 6.5e-91 IV02_22295 U Binding-protein-dependent transport system inner membrane component
BOCCACLF_00652 1.2e-93 cysT P Binding-protein-dependent transport system inner membrane component
BOCCACLF_00653 2.7e-146 P Bacterial extracellular solute-binding protein
BOCCACLF_00654 7.1e-115
BOCCACLF_00655 2.4e-84 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BOCCACLF_00656 2.2e-123 gntR1 K UbiC transcription regulator-associated domain protein
BOCCACLF_00657 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
BOCCACLF_00658 8.2e-62 O Zinc-dependent metalloprotease
BOCCACLF_00659 1.1e-211 EGP Major facilitator Superfamily
BOCCACLF_00660 5.4e-64 K Bacterial regulatory proteins, tetR family
BOCCACLF_00661 7.3e-70 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BOCCACLF_00662 8.5e-51
BOCCACLF_00663 2.1e-121 plnC K LytTr DNA-binding domain
BOCCACLF_00664 1.2e-172 L transposase, IS605 OrfB family
BOCCACLF_00665 1.2e-55 tlpA2 L COGs COG1943 Transposase and inactivated derivatives
BOCCACLF_00666 1.2e-170 2.7.13.3 T GHKL domain
BOCCACLF_00667 1.6e-172 2.1.1.80, 2.7.13.3, 3.1.1.61 T protein histidine kinase activity
BOCCACLF_00668 3.4e-134 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BOCCACLF_00669 1.9e-78 uspA T universal stress protein
BOCCACLF_00672 7.7e-295 oppA1 E ABC transporter substrate-binding protein
BOCCACLF_00673 2.1e-166 oppC EP Binding-protein-dependent transport system inner membrane component
BOCCACLF_00674 2.2e-171 oppB P ABC transporter permease
BOCCACLF_00675 2.7e-169 oppF P Belongs to the ABC transporter superfamily
BOCCACLF_00676 6.7e-179 oppD P Belongs to the ABC transporter superfamily
BOCCACLF_00677 1.2e-74 ywnA K Winged helix-turn-helix transcription repressor, HrcA DNA-binding
BOCCACLF_00678 1.4e-184 lplA 6.3.1.20 H Lipoate-protein ligase
BOCCACLF_00679 1.2e-41
BOCCACLF_00680 2.7e-45
BOCCACLF_00681 1.5e-74 S Protein of unknown function (DUF1211)
BOCCACLF_00682 2.1e-154 S DUF218 domain
BOCCACLF_00684 5.7e-139
BOCCACLF_00685 7.5e-63 K Transcriptional regulator
BOCCACLF_00686 0.0 pepF2 E Oligopeptidase F
BOCCACLF_00687 7.9e-150 D Alpha beta
BOCCACLF_00688 3.5e-102 yoaK S Protein of unknown function (DUF1275)
BOCCACLF_00689 2.3e-250 rny S Endoribonuclease that initiates mRNA decay
BOCCACLF_00690 8e-280 cpdB 3.1.3.6, 3.1.4.16 F 5'-nucleotidase, C-terminal domain
BOCCACLF_00691 1.6e-283 yjcE P Sodium proton antiporter
BOCCACLF_00692 2.8e-64 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BOCCACLF_00693 1.8e-33
BOCCACLF_00694 7.8e-142 panE2 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BOCCACLF_00695 6.5e-303 yuxL 3.4.19.1 E Prolyl oligopeptidase family
BOCCACLF_00696 4.1e-46
BOCCACLF_00697 2e-49 L An automated process has identified a potential problem with this gene model
BOCCACLF_00698 9.1e-239 ytgP S Polysaccharide biosynthesis protein
BOCCACLF_00699 7.4e-80 iap CBM50 M NlpC P60 family
BOCCACLF_00700 2.9e-147 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BOCCACLF_00701 5.2e-105
BOCCACLF_00702 2.7e-89 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
BOCCACLF_00703 2.3e-100 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
BOCCACLF_00704 7.3e-69 K Winged helix DNA-binding domain
BOCCACLF_00705 1.2e-36
BOCCACLF_00707 5.5e-24 higA K Pfam:DUF955
BOCCACLF_00708 8.7e-51 yfjR K WYL domain
BOCCACLF_00709 1.6e-98 strH 3.2.1.52 GH20 G beta-N-acetylhexosaminidase activity
BOCCACLF_00710 1.7e-252 Z012_07420 3.1.21.5 V Z1 domain
BOCCACLF_00711 8.3e-78 L NgoFVII restriction endonuclease
BOCCACLF_00712 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_00713 1.6e-23 L NgoFVII restriction endonuclease
BOCCACLF_00714 4.4e-181 2.1.1.37 H C-5 cytosine-specific DNA methylase
BOCCACLF_00715 2.2e-218 L Transposase
BOCCACLF_00716 1.7e-209 brnQ U Component of the transport system for branched-chain amino acids
BOCCACLF_00717 7.9e-33 S MazG-like family
BOCCACLF_00718 3.8e-182 N Uncharacterized conserved protein (DUF2075)
BOCCACLF_00719 7.1e-213 rarA L recombination factor protein RarA
BOCCACLF_00720 5.5e-50 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BOCCACLF_00721 6e-125 akr5f 1.1.1.346 C Aldo keto reductase
BOCCACLF_00722 6e-187 xylR GK ROK family
BOCCACLF_00723 1.7e-41 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
BOCCACLF_00724 3.9e-259 xylA 5.3.1.5 G Belongs to the xylose isomerase family
BOCCACLF_00725 2.6e-280 xylB 2.7.1.12, 2.7.1.16, 2.7.1.17 G Xylulose kinase
BOCCACLF_00726 8.6e-230 xylT EGP Major facilitator Superfamily
BOCCACLF_00727 5.8e-226 xylT EGP Major facilitator Superfamily
BOCCACLF_00728 2.6e-138 IQ reductase
BOCCACLF_00731 4.5e-56 frataxin S Domain of unknown function (DU1801)
BOCCACLF_00732 2.4e-71 uspA T universal stress protein
BOCCACLF_00733 2.6e-91 yxkA S Phosphatidylethanolamine-binding protein
BOCCACLF_00734 1.3e-181 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
BOCCACLF_00735 2.5e-48 gepA K Protein of unknown function (DUF4065)
BOCCACLF_00736 3e-22
BOCCACLF_00737 2.2e-218 L Transposase
BOCCACLF_00738 6.8e-78 kcsA P Ion channel
BOCCACLF_00739 8e-26
BOCCACLF_00740 4.7e-157 C Aldo keto reductase
BOCCACLF_00741 2.6e-46
BOCCACLF_00742 6.4e-80 Z012_06855 S Acetyltransferase (GNAT) family
BOCCACLF_00743 1.4e-235 nhaC C Na H antiporter NhaC
BOCCACLF_00744 1.5e-62 sirR K Helix-turn-helix diphteria tox regulatory element
BOCCACLF_00745 6.3e-248 mntH P H( )-stimulated, divalent metal cation uptake system
BOCCACLF_00746 2.1e-57 T Belongs to the universal stress protein A family
BOCCACLF_00747 5.6e-233 mntH P H( )-stimulated, divalent metal cation uptake system
BOCCACLF_00748 9.8e-55 T Belongs to the universal stress protein A family
BOCCACLF_00749 2.7e-08 S HicB_like antitoxin of bacterial toxin-antitoxin system
BOCCACLF_00750 1.2e-180 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BOCCACLF_00751 3.9e-240 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BOCCACLF_00752 3.5e-225 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BOCCACLF_00754 1.2e-166 D Alpha beta
BOCCACLF_00755 3.1e-115 ptp3 3.1.3.48 T Tyrosine phosphatase family
BOCCACLF_00756 2.1e-144 I Alpha beta
BOCCACLF_00757 1.5e-200 O Pro-kumamolisin, activation domain
BOCCACLF_00758 3e-140 S regulation of response to stimulus
BOCCACLF_00759 2.2e-114 S Membrane
BOCCACLF_00760 8.6e-120 puuD S peptidase C26
BOCCACLF_00761 2.5e-29
BOCCACLF_00762 1.2e-99 magIII L Base excision DNA repair protein, HhH-GPD family
BOCCACLF_00763 1.4e-273 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BOCCACLF_00764 5.4e-22 K peptidyl-tyrosine sulfation
BOCCACLF_00765 6e-120 XK27_00890 S Domain of unknown function (DUF368)
BOCCACLF_00766 8.3e-110 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BOCCACLF_00767 1.9e-62
BOCCACLF_00768 5.3e-236 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BOCCACLF_00769 3.6e-93 ybbL S ABC transporter, ATP-binding protein
BOCCACLF_00770 1.1e-122 ybbM S Uncharacterised protein family (UPF0014)
BOCCACLF_00771 2.3e-132 vdlC S Enoyl-(Acyl carrier protein) reductase
BOCCACLF_00772 7.2e-112 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
BOCCACLF_00773 3.3e-136 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
BOCCACLF_00774 6.2e-77 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
BOCCACLF_00775 2e-204 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
BOCCACLF_00776 6.9e-37
BOCCACLF_00777 2.2e-37
BOCCACLF_00778 9e-161
BOCCACLF_00779 6.8e-72 K DNA-templated transcription, initiation
BOCCACLF_00780 5.2e-19
BOCCACLF_00781 6.9e-10 S Protein of unknown function (DUF2922)
BOCCACLF_00782 2.7e-80 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
BOCCACLF_00783 8.8e-13
BOCCACLF_00784 5.8e-15
BOCCACLF_00785 1.2e-13
BOCCACLF_00786 6e-137 S AAA domain, putative AbiEii toxin, Type IV TA system
BOCCACLF_00787 1.5e-158 K LysR substrate binding domain
BOCCACLF_00788 2.7e-182 EK Aminotransferase, class I
BOCCACLF_00789 2.6e-10 relB L RelB antitoxin
BOCCACLF_00791 6.1e-88
BOCCACLF_00792 3.1e-300 S membrane
BOCCACLF_00795 3.4e-09
BOCCACLF_00796 9.4e-97 E IrrE N-terminal-like domain
BOCCACLF_00797 2.6e-21 S AAA ATPase domain
BOCCACLF_00799 1.1e-20
BOCCACLF_00800 1.9e-43
BOCCACLF_00801 1.1e-09
BOCCACLF_00802 8.2e-108 3.1.3.48 T Tyrosine phosphatase family
BOCCACLF_00803 3.5e-26 S Region found in RelA / SpoT proteins
BOCCACLF_00804 1.5e-41 S Protein of unknown function (DUF4065)
BOCCACLF_00806 2.5e-115 S AAA domain, putative AbiEii toxin, Type IV TA system
BOCCACLF_00808 6.1e-77
BOCCACLF_00809 1.1e-74
BOCCACLF_00810 3.2e-41
BOCCACLF_00811 9.2e-27
BOCCACLF_00812 2.9e-50 K HxlR-like helix-turn-helix
BOCCACLF_00813 3e-35
BOCCACLF_00814 2.9e-57
BOCCACLF_00815 4e-38
BOCCACLF_00816 2e-91 GM NmrA-like family
BOCCACLF_00817 3.1e-126 5.4.2.7 G Metalloenzyme superfamily
BOCCACLF_00818 7e-218 nupG F Nucleoside
BOCCACLF_00819 6.4e-206 pbuO_1 S Permease family
BOCCACLF_00820 2.5e-164 rihC 3.2.2.1, 3.2.2.8 F Nucleoside
BOCCACLF_00822 2.7e-136 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 S Calcineurin-like phosphoesterase
BOCCACLF_00823 3.9e-120 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
BOCCACLF_00824 2.1e-125 noc K Belongs to the ParB family
BOCCACLF_00825 5.5e-133 soj D Sporulation initiation inhibitor
BOCCACLF_00826 1.2e-147 spo0J K Belongs to the ParB family
BOCCACLF_00827 8.5e-33 yyzM S Bacterial protein of unknown function (DUF951)
BOCCACLF_00828 2.7e-194 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BOCCACLF_00829 9.2e-114 XK27_01040 S Protein of unknown function (DUF1129)
BOCCACLF_00830 9e-12
BOCCACLF_00831 5.3e-234 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BOCCACLF_00832 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_00834 5.7e-212 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BOCCACLF_00835 6.4e-118 S Psort location CytoplasmicMembrane, score
BOCCACLF_00836 3.7e-202 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BOCCACLF_00838 2.3e-122 K response regulator
BOCCACLF_00839 6.8e-199 hpk31 2.7.13.3 T Histidine kinase
BOCCACLF_00840 1e-211 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BOCCACLF_00841 2.6e-168 V domain protein
BOCCACLF_00842 6e-64 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
BOCCACLF_00843 1.1e-128 azlC E AzlC protein
BOCCACLF_00844 1e-46 azlD S branched-chain amino acid
BOCCACLF_00845 3.6e-235 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOCCACLF_00848 4e-223 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
BOCCACLF_00849 1.1e-97
BOCCACLF_00850 8.3e-197 xylR GK ROK family
BOCCACLF_00851 1.6e-154 K AI-2E family transporter
BOCCACLF_00852 6.1e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BOCCACLF_00853 2.4e-35 yafP 3.6.4.13 K Acetyltransferase (GNAT) domain
BOCCACLF_00854 3.9e-32
BOCCACLF_00855 3.8e-10
BOCCACLF_00856 3.1e-32
BOCCACLF_00857 2e-48 K Transcriptional regulator C-terminal region
BOCCACLF_00858 2.5e-100 V ABC transporter, ATP-binding protein
BOCCACLF_00859 9.7e-233 V ABC transporter permease
BOCCACLF_00861 9.3e-50 thiT S Thiamine transporter
BOCCACLF_00864 1.7e-45 K HxlR-like helix-turn-helix
BOCCACLF_00865 5.7e-119 C D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
BOCCACLF_00866 2.6e-07
BOCCACLF_00868 3.5e-69 S Cysteine-rich secretory protein family
BOCCACLF_00869 3.2e-08
BOCCACLF_00870 2.7e-105 tas 1.1.1.65 C aldo keto reductase
BOCCACLF_00871 4.6e-34 K HxlR family transcriptional regulator
BOCCACLF_00872 6.2e-60 1.6.5.2 S NADPH-dependent FMN reductase
BOCCACLF_00873 3e-43 K Helix-turn-helix domain
BOCCACLF_00874 6.4e-60 S SnoaL-like polyketide cyclase
BOCCACLF_00875 4.4e-67 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
BOCCACLF_00876 2.4e-81 S NAD(P)H-binding
BOCCACLF_00877 9.5e-83 C Aldo keto reductase
BOCCACLF_00878 3.9e-87 K Psort location Cytoplasmic, score 9.98
BOCCACLF_00879 1.2e-07 racA K MerR HTH family regulatory protein
BOCCACLF_00880 2.4e-97 1.1.1.346 S reductase
BOCCACLF_00881 4.8e-77 yvgN S Oxidoreductase, aldo keto reductase family protein
BOCCACLF_00883 2.2e-218 L Transposase
BOCCACLF_00884 3.3e-53
BOCCACLF_00886 3.2e-60 CP_1020 S Zinc finger, swim domain protein
BOCCACLF_00887 3.9e-37 K DNA-binding transcription factor activity
BOCCACLF_00888 2.9e-18 higA K Addiction module antidote protein, HigA
BOCCACLF_00889 1.8e-242 yjcE P Sodium proton antiporter
BOCCACLF_00891 6.7e-28 S Cell surface protein
BOCCACLF_00892 1.1e-44 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
BOCCACLF_00893 9.5e-49 K helix_turn_helix multiple antibiotic resistance protein
BOCCACLF_00894 2.3e-125 drrA V ABC transporter
BOCCACLF_00895 3e-86 drrB U ABC-2 type transporter
BOCCACLF_00896 6.4e-37 S Cyclophilin-like
BOCCACLF_00897 4.8e-134 S Hydrolases of the alpha beta superfamily
BOCCACLF_00900 1.4e-74
BOCCACLF_00902 9.7e-98 K Helix-turn-helix domain
BOCCACLF_00903 4.7e-127 M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BOCCACLF_00904 2.1e-118
BOCCACLF_00906 2.2e-218 L Transposase
BOCCACLF_00907 2e-51
BOCCACLF_00908 1.2e-215 ica2 GT2 M Glycosyl transferase family group 2
BOCCACLF_00909 1e-59 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
BOCCACLF_00910 3.6e-187 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BOCCACLF_00912 0.0 xpkA 4.1.2.22, 4.1.2.9 G Phosphoketolase
BOCCACLF_00913 3.4e-13 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
BOCCACLF_00914 2.2e-30 yoeB S Addiction module toxin, Txe YoeB family
BOCCACLF_00915 5.8e-68 yfjR K WYL domain
BOCCACLF_00916 8.1e-29
BOCCACLF_00917 7.4e-111 malE G Bacterial extracellular solute-binding protein
BOCCACLF_00918 4.6e-101 malF G Binding-protein-dependent transport system inner membrane component
BOCCACLF_00920 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_00921 1.9e-88 malG P ABC-type sugar transport systems, permease components
BOCCACLF_00922 1.3e-97 malK P ATPases associated with a variety of cellular activities
BOCCACLF_00923 4.5e-73 K Transcriptional regulatory protein, C terminal
BOCCACLF_00924 1.3e-92 T PhoQ Sensor
BOCCACLF_00925 1.8e-18 K Acetyltransferase (GNAT) domain
BOCCACLF_00926 6.2e-141 2.7.7.65 T Diguanylate cyclase, GGDEF domain
BOCCACLF_00927 7.8e-112 N domain, Protein
BOCCACLF_00928 6.9e-69 N WxL domain surface cell wall-binding
BOCCACLF_00929 4.8e-54 K Transcriptional regulator
BOCCACLF_00930 9e-72 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
BOCCACLF_00931 3.2e-176 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
BOCCACLF_00932 5.1e-79 K Transcriptional regulator
BOCCACLF_00933 2.3e-135 akr5f 1.1.1.346 S reductase
BOCCACLF_00934 6e-128 S Oxidoreductase, aldo keto reductase family protein
BOCCACLF_00935 4.5e-155 ykiI
BOCCACLF_00936 2.5e-39
BOCCACLF_00937 8.2e-48 lysM M LysM domain
BOCCACLF_00938 3.1e-121 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
BOCCACLF_00939 2.2e-120
BOCCACLF_00940 1.3e-134 map 3.4.11.18 E Methionine Aminopeptidase
BOCCACLF_00941 1.3e-07
BOCCACLF_00942 1.9e-69 IQ reductase
BOCCACLF_00943 5.2e-63 3.1.3.48 T Tyrosine phosphatase family
BOCCACLF_00944 1.4e-20
BOCCACLF_00945 7.3e-32 DJ ParE toxin of type II toxin-antitoxin system, parDE
BOCCACLF_00946 1.8e-118 S Sucrose-6F-phosphate phosphohydrolase
BOCCACLF_00947 6.1e-163 bcr1 EGP Major facilitator Superfamily
BOCCACLF_00949 4.4e-84 zmp3 O Zinc-dependent metalloprotease
BOCCACLF_00950 3.1e-73 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
BOCCACLF_00951 1.6e-277 ctpA 3.6.3.54 P P-type ATPase
BOCCACLF_00952 1.3e-25 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
BOCCACLF_00953 2.9e-47 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
BOCCACLF_00954 4.9e-118 3.5.2.6 V Beta-lactamase enzyme family
BOCCACLF_00955 6.6e-116 KT YcbB domain
BOCCACLF_00956 1.3e-174 2.1.1.80, 2.7.13.3, 3.1.1.61 T histidine kinase DNA gyrase B
BOCCACLF_00957 6.2e-169 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BOCCACLF_00958 2.9e-152 arcC 2.7.2.2 E Belongs to the carbamate kinase family
BOCCACLF_00959 1.5e-246 S C4-dicarboxylate anaerobic carrier
BOCCACLF_00960 5.6e-159 C Aldo keto reductase
BOCCACLF_00961 2.1e-56
BOCCACLF_00962 4.8e-160 pntA 1.6.1.2 C Alanine dehydrogenase/PNT, N-terminal domain
BOCCACLF_00963 6.1e-38 pntAB 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
BOCCACLF_00964 5.8e-221 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BOCCACLF_00965 1.6e-54 yvoA_1 K Transcriptional regulator, GntR family
BOCCACLF_00966 1.2e-110 skfE V ATPases associated with a variety of cellular activities
BOCCACLF_00967 2.7e-79
BOCCACLF_00968 2.1e-110 EGP Major facilitator Superfamily
BOCCACLF_00969 2.1e-94 S membrane transporter protein
BOCCACLF_00970 3.7e-44 S 3-demethylubiquinone-9 3-methyltransferase
BOCCACLF_00971 6.2e-29 glxI 4.4.1.5 E lactoylglutathione lyase activity
BOCCACLF_00972 1.5e-28
BOCCACLF_00973 9e-42 rmaB K Transcriptional regulator, MarR family
BOCCACLF_00974 1.5e-279 lmrA 3.6.3.44 V ABC transporter
BOCCACLF_00975 9.2e-213 epsA I PAP2 superfamily
BOCCACLF_00976 1.1e-188 3.2.1.20 GH31 G Glycosyl hydrolases family 31
BOCCACLF_00977 1.7e-143 lacS G MFS/sugar transport protein
BOCCACLF_00978 8.5e-40 K HxlR-like helix-turn-helix
BOCCACLF_00979 7.4e-110 QT PucR C-terminal helix-turn-helix domain
BOCCACLF_00980 1.4e-60 pnb C nitroreductase
BOCCACLF_00981 2.1e-58 ylbE GM NAD(P)H-binding
BOCCACLF_00982 4.5e-305 rafA 3.2.1.22 G alpha-galactosidase
BOCCACLF_00983 8.6e-81 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BOCCACLF_00984 2.6e-56 S Domain of unknown function (DUF4867)
BOCCACLF_00985 1.9e-197 S Protein of unknown function DUF262
BOCCACLF_00986 1.3e-120 hbd2 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
BOCCACLF_00987 8.2e-138 potE5 E amino acid
BOCCACLF_00988 1.2e-20
BOCCACLF_00989 2.7e-186 I acetylesterase activity
BOCCACLF_00991 3.8e-56 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
BOCCACLF_00992 1.2e-33 S Protein of unknown function (DUF1697)
BOCCACLF_00993 2.8e-112 K LysR substrate binding domain
BOCCACLF_00994 1.8e-273 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BOCCACLF_00995 5.3e-93 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
BOCCACLF_00996 2.5e-63
BOCCACLF_00997 1.6e-30
BOCCACLF_00998 6.8e-82 yfeJ 6.3.5.2 F glutamine amidotransferase
BOCCACLF_00999 1.4e-53 I Acyl-transferase
BOCCACLF_01000 4.3e-91 arbx M Glycosyl transferase family 8
BOCCACLF_01001 2.6e-84 arbY M family 8
BOCCACLF_01002 1.3e-85 arbZ I Phosphate acyltransferases
BOCCACLF_01003 6.5e-41 K Bacterial regulatory proteins, tetR family
BOCCACLF_01004 9.1e-64 S Alpha/beta hydrolase family
BOCCACLF_01005 5.6e-42 K MarR family
BOCCACLF_01006 1.7e-107 ybhF_2 V AAA domain, putative AbiEii toxin, Type IV TA system
BOCCACLF_01007 1.1e-146 ybhR V ABC transporter
BOCCACLF_01008 2.7e-72 K Bacterial regulatory proteins, tetR family
BOCCACLF_01010 6.1e-99 P ABC-type cobalt transport system permease component CbiQ and related transporters
BOCCACLF_01011 8.9e-205 ykoD_2 S AAA domain, putative AbiEii toxin, Type IV TA system
BOCCACLF_01012 2.9e-103 S ECF-type riboflavin transporter, S component
BOCCACLF_01013 1.4e-115 U FFAT motif binding
BOCCACLF_01014 1.3e-32 S Domain of unknown function (DUF4430)
BOCCACLF_01015 1.1e-119 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
BOCCACLF_01016 1.5e-144 K helix_turn_helix, arabinose operon control protein
BOCCACLF_01017 4.9e-39 pduA_4 CQ BMC
BOCCACLF_01018 5.1e-105 pduB E BMC
BOCCACLF_01019 1.4e-287 pduC 4.2.1.28 Q Dehydratase large subunit
BOCCACLF_01020 8.5e-109 pduD 4.2.1.28, 4.2.1.30 Q Dehydratase medium subunit
BOCCACLF_01021 3.7e-72 pduE 4.2.1.28 Q Dehydratase small subunit
BOCCACLF_01022 1.3e-310 pduG D Diol dehydratase reactivase ATPase-like domain
BOCCACLF_01023 6.2e-39 pduH S Dehydratase medium subunit
BOCCACLF_01024 5.3e-47 pduK CQ BMC
BOCCACLF_01025 1.6e-40 pduA_4 CQ BMC
BOCCACLF_01026 4.2e-99 pduL 2.3.1.222, 2.3.1.8 Q Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
BOCCACLF_01027 7.3e-57 S Putative propanediol utilisation
BOCCACLF_01028 2.3e-91 pduO 2.5.1.17 S Cobalamin adenosyltransferase
BOCCACLF_01029 1.7e-67 pduO S Haem-degrading
BOCCACLF_01030 1.5e-240 pduP 1.2.1.87 C Aldehyde dehydrogenase family
BOCCACLF_01031 4.3e-187 pduQ C Iron-containing alcohol dehydrogenase
BOCCACLF_01032 1.3e-181 ackA 2.7.2.1, 2.7.2.15 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BOCCACLF_01033 2.1e-52 pduU E BMC
BOCCACLF_01034 2.2e-111 C Oxidoreductase
BOCCACLF_01035 1.7e-89 3.1.3.48 T Pfam:Y_phosphatase3C
BOCCACLF_01036 7e-45 eutP E Ethanolamine utilisation - propanediol utilisation
BOCCACLF_01037 1e-76 pduQ C Iron-containing alcohol dehydrogenase
BOCCACLF_01038 6.5e-133 ackA 2.7.2.1, 2.7.2.15 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BOCCACLF_01039 2e-27 chrR S NAD(P)H-dependent FMN reductase
BOCCACLF_01040 2.3e-92 eutJ E Hsp70 protein
BOCCACLF_01041 5.8e-34 eutP E Ethanolamine utilisation - propanediol utilisation
BOCCACLF_01042 3.4e-158 EGP Major facilitator Superfamily
BOCCACLF_01043 9.2e-180 EGP Major facilitator Superfamily
BOCCACLF_01044 3.4e-120 5.4.99.21 M domain protein
BOCCACLF_01045 2e-71 yobS K Bacterial regulatory proteins, tetR family
BOCCACLF_01046 1.2e-62 K helix_turn_helix, mercury resistance
BOCCACLF_01047 7.6e-76 yphH S Cupin domain
BOCCACLF_01048 9.9e-52 yphJ 4.1.1.44 S decarboxylase
BOCCACLF_01049 3.1e-161 G Glycosyl hydrolases family 8
BOCCACLF_01050 5.1e-184 mntH P H( )-stimulated, divalent metal cation uptake system
BOCCACLF_01051 3.1e-141 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
BOCCACLF_01052 9.1e-138 XK27_00880 3.5.1.28 M hydrolase, family 25
BOCCACLF_01053 2.7e-110 S Zinc-dependent metalloprotease
BOCCACLF_01054 7.7e-84 tag 3.2.2.20 L glycosylase
BOCCACLF_01055 1.6e-168 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
BOCCACLF_01056 3.9e-193 sbcC L Putative exonuclease SbcCD, C subunit
BOCCACLF_01057 7.2e-162 pva1 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
BOCCACLF_01058 1.4e-51 elaA S Acetyltransferase (GNAT) domain
BOCCACLF_01059 0.0 3.2.1.21 GH3 G hydrolase, family 3
BOCCACLF_01060 8.9e-282 E ABC transporter, substratebinding protein
BOCCACLF_01061 3.9e-80 tag 3.2.2.20 L glycosylase
BOCCACLF_01062 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_01063 1.1e-107 P Belongs to the nlpA lipoprotein family
BOCCACLF_01064 6.4e-180 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BOCCACLF_01065 2.1e-107 metI P ABC transporter permease
BOCCACLF_01067 3.7e-139 EG EamA-like transporter family
BOCCACLF_01068 7.5e-88 3.1.3.73 G phosphoglycerate mutase
BOCCACLF_01069 7.2e-24 IQ KR domain
BOCCACLF_01070 3e-41 IQ KR domain
BOCCACLF_01071 4.2e-30
BOCCACLF_01072 1.7e-54 fld C Flavodoxin
BOCCACLF_01073 3.3e-66 cobO 2.5.1.17 S Cobalamin adenosyltransferase
BOCCACLF_01074 1.2e-38 S Pfam:DUF3816
BOCCACLF_01075 1.8e-86 cobD 4.1.1.81 E Aminotransferase class I and II
BOCCACLF_01076 5.7e-165 cbiA 6.3.5.11, 6.3.5.9 F Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
BOCCACLF_01077 8e-105 cobD 6.3.1.10 H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BOCCACLF_01078 2.3e-87 cbiC 5.4.99.60, 5.4.99.61 H Precorrin-8X methylmutase
BOCCACLF_01079 6e-160 cbiD 2.1.1.195 H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
BOCCACLF_01080 3.7e-60 cbiE 2.1.1.132, 2.1.1.289 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BOCCACLF_01081 1.1e-52 cbiT 2.1.1.132, 2.1.1.196 H Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
BOCCACLF_01082 3.1e-115 cobM 1.3.1.76, 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 4.99.1.4 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BOCCACLF_01083 2.4e-94 cbiG 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12 H Cobalamin synthesis G C-terminus
BOCCACLF_01084 1.4e-114 cobJ 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 6.3.5.10 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BOCCACLF_01085 1.3e-70 cobK 1.3.1.106, 1.3.1.54, 2.1.1.195 H Precorrin-6x reductase CbiJ/CobK
BOCCACLF_01086 3.2e-134 cobA 2.1.1.107, 4.2.1.75 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BOCCACLF_01087 7e-75 cbiK 4.99.1.3 H Cobalt chelatase (CbiK)
BOCCACLF_01088 1.8e-77 cobI 2.1.1.130, 2.1.1.151, 4.99.1.3 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BOCCACLF_01089 1.9e-109 cbiM P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
BOCCACLF_01090 5.9e-31 cbiN P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
BOCCACLF_01091 6.4e-80 cbiQ P Cobalt transport protein
BOCCACLF_01092 2.2e-106 cbiO 2.1.1.195 P part of an ABC transporter complex. Responsible for energy coupling to the transport system
BOCCACLF_01093 6.9e-204 cobQ 6.3.5.10 H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
BOCCACLF_01094 2e-37 cysG 1.3.1.76, 4.99.1.4 H Putative NAD(P)-binding
BOCCACLF_01095 2.4e-133 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BOCCACLF_01096 2e-105 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
BOCCACLF_01097 7.3e-154 hemB 4.2.1.24 H Delta-aminolevulinic acid dehydratase
BOCCACLF_01098 1e-187 hemL 5.4.3.8 H Aminotransferase class-III
BOCCACLF_01099 9.3e-64
BOCCACLF_01100 1.2e-55 cobU 2.7.1.156, 2.7.7.62, 6.3.5.10 H Cobinamide kinase / cobinamide phosphate guanyltransferase
BOCCACLF_01101 2.4e-80 cobS 2.7.8.26 H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BOCCACLF_01102 8.7e-46 cobC 3.1.3.73 G Belongs to the phosphoglycerate mutase family
BOCCACLF_01103 1.4e-29 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
BOCCACLF_01104 7e-57 K helix_turn_helix, arabinose operon control protein
BOCCACLF_01105 1.8e-38 pgm1 G phosphoglycerate mutase
BOCCACLF_01106 2.4e-52 gcvH E glycine cleavage
BOCCACLF_01107 7.1e-160 6.3.1.20 H Lipoate-protein ligase
BOCCACLF_01108 1.6e-38
BOCCACLF_01109 8e-230 E Bacterial extracellular solute-binding proteins, family 5 Middle
BOCCACLF_01110 1.4e-169 mutY L A G-specific adenine glycosylase
BOCCACLF_01111 4.2e-42
BOCCACLF_01112 9e-78 XK27_00220 S Dienelactone hydrolase family
BOCCACLF_01113 1.2e-31 cspC K Cold shock protein
BOCCACLF_01114 3e-32 S Cytochrome B5
BOCCACLF_01115 4.1e-27 S Phage derived protein Gp49-like (DUF891)
BOCCACLF_01116 4.5e-16 K Helix-turn-helix domain
BOCCACLF_01118 5.1e-16
BOCCACLF_01120 1.5e-95 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
BOCCACLF_01121 1.5e-100 yrkL S Flavodoxin-like fold
BOCCACLF_01122 5.6e-20
BOCCACLF_01123 6.9e-134 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
BOCCACLF_01124 4.6e-27
BOCCACLF_01125 4e-226 codA 3.5.4.1 F cytosine deaminase
BOCCACLF_01127 1.6e-74
BOCCACLF_01128 2.1e-104 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BOCCACLF_01129 6.3e-63 S 3-demethylubiquinone-9 3-methyltransferase
BOCCACLF_01130 2.8e-100 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
BOCCACLF_01131 7.8e-237 U Belongs to the BCCT transporter (TC 2.A.15) family
BOCCACLF_01132 2.2e-68 usp1 T Universal stress protein family
BOCCACLF_01133 2.4e-87 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S HAD-hyrolase-like
BOCCACLF_01134 6.8e-55 yeaO S Protein of unknown function, DUF488
BOCCACLF_01135 1.1e-102 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
BOCCACLF_01136 9.5e-09
BOCCACLF_01137 1.3e-122 hipB K Helix-turn-helix
BOCCACLF_01138 2.3e-21
BOCCACLF_01139 2.7e-53 XK27_01125 L IS66 Orf2 like protein
BOCCACLF_01140 3.2e-177 L Transposase IS66 family
BOCCACLF_01141 1.4e-114 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
BOCCACLF_01142 1.3e-140 map 3.4.11.18 E Methionine Aminopeptidase
BOCCACLF_01143 3.6e-16
BOCCACLF_01144 2.5e-216 EGP Major facilitator Superfamily
BOCCACLF_01145 7.4e-66 6.3.3.2 S ASCH
BOCCACLF_01146 9.9e-33 M Glycosyl hydrolases family 25
BOCCACLF_01147 3.6e-140 S Bacterial SH3 domain
BOCCACLF_01148 2.9e-12 S Bacteriophage holin of superfamily 6 (Holin_LLH)
BOCCACLF_01149 1.1e-134 IQ Enoyl-(Acyl carrier protein) reductase
BOCCACLF_01150 4.1e-129 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BOCCACLF_01151 8.4e-192 oxlT G Major Facilitator Superfamily
BOCCACLF_01152 6.7e-82 K Transcriptional regulator, LysR family
BOCCACLF_01153 2.6e-268 oppD EP Psort location Cytoplasmic, score
BOCCACLF_01154 2.2e-155 etfA C Electron transfer flavoprotein FAD-binding domain
BOCCACLF_01155 1.8e-134 etfB C Electron transfer flavoprotein domain
BOCCACLF_01156 1.6e-194 mmgC 1.3.8.1 I Acyl-CoA dehydrogenase, C-terminal domain
BOCCACLF_01157 3.2e-173 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
BOCCACLF_01158 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
BOCCACLF_01159 3.7e-35
BOCCACLF_01160 6.9e-238 gph G Transporter
BOCCACLF_01161 2.2e-213 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BOCCACLF_01162 1.4e-181 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BOCCACLF_01163 4.4e-248 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
BOCCACLF_01164 9.7e-154 galR K Transcriptional regulator
BOCCACLF_01167 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
BOCCACLF_01168 4.5e-66 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
BOCCACLF_01169 6e-309 pepO 3.4.24.71 O Peptidase family M13
BOCCACLF_01170 6.7e-71 K helix_turn_helix multiple antibiotic resistance protein
BOCCACLF_01171 4e-95
BOCCACLF_01172 1.6e-62 uspA T Belongs to the universal stress protein A family
BOCCACLF_01174 3e-180 yibE S overlaps another CDS with the same product name
BOCCACLF_01175 2.1e-111 yibF S overlaps another CDS with the same product name
BOCCACLF_01177 2e-152 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
BOCCACLF_01178 2.5e-78 perR P Belongs to the Fur family
BOCCACLF_01179 2e-102 S VIT family
BOCCACLF_01180 5.6e-108 S membrane
BOCCACLF_01181 5.8e-270 E amino acid
BOCCACLF_01182 2.7e-52 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BOCCACLF_01183 1.9e-173 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
BOCCACLF_01184 4.2e-148 sepS16B
BOCCACLF_01185 9.4e-108
BOCCACLF_01186 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
BOCCACLF_01187 2.7e-26
BOCCACLF_01188 2.5e-24
BOCCACLF_01189 7.7e-42
BOCCACLF_01190 1.3e-146 pstS P Phosphate
BOCCACLF_01191 8.3e-155 pstC P probably responsible for the translocation of the substrate across the membrane
BOCCACLF_01192 3.8e-146 pstA P Phosphate transport system permease protein PstA
BOCCACLF_01193 4.5e-138 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BOCCACLF_01194 5.2e-28
BOCCACLF_01195 1.8e-174 potD P ABC transporter
BOCCACLF_01196 2.7e-122 potC P ABC transporter permease
BOCCACLF_01197 1.1e-142 potB P ABC transporter permease
BOCCACLF_01198 8.6e-188 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BOCCACLF_01200 4.1e-159 natB CP ABC-2 family transporter protein
BOCCACLF_01201 6.6e-146 natA S ABC transporter, ATP-binding protein
BOCCACLF_01202 2.7e-231 pbuX F xanthine permease
BOCCACLF_01203 2.3e-14
BOCCACLF_01204 8.9e-162 ansA 3.5.1.1 EJ Asparaginase
BOCCACLF_01205 4.4e-166
BOCCACLF_01206 2.2e-25
BOCCACLF_01208 1.2e-75 ymdB S Macro domain protein
BOCCACLF_01209 1.8e-08
BOCCACLF_01210 9.1e-39
BOCCACLF_01211 6.3e-90 tenA 3.5.99.2 K TENA/THI-4/PQQC family
BOCCACLF_01212 9.9e-91 P Cobalt transport protein
BOCCACLF_01213 7.1e-187 P ABC transporter
BOCCACLF_01214 3.6e-81 S ABC transporter permease
BOCCACLF_01215 2.7e-179 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BOCCACLF_01216 9.7e-174 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BOCCACLF_01217 2.6e-99 cat 2.3.1.28 V Chloramphenicol acetyltransferase
BOCCACLF_01218 2.4e-96 S Uncharacterized protein conserved in bacteria (DUF2087)
BOCCACLF_01219 8.1e-90 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
BOCCACLF_01220 3.6e-137 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BOCCACLF_01221 3.6e-111 S Alpha/beta hydrolase of unknown function (DUF915)
BOCCACLF_01222 3.2e-123 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
BOCCACLF_01223 2.3e-63
BOCCACLF_01224 1.2e-52 K Transcriptional regulator
BOCCACLF_01225 5.6e-13 S Polyketide cyclase / dehydrase and lipid transport
BOCCACLF_01227 3.2e-170 iunH2 3.2.2.1, 3.2.2.8 F nucleoside hydrolase
BOCCACLF_01228 2.4e-176 S Protease prsW family
BOCCACLF_01229 5.8e-95 S Alpha/beta hydrolase of unknown function (DUF915)
BOCCACLF_01230 2.9e-142 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
BOCCACLF_01231 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BOCCACLF_01232 3.8e-114 pgm3 G phosphoglycerate mutase family
BOCCACLF_01233 4.3e-58 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BOCCACLF_01234 4e-12 yvaO K Helix-turn-helix XRE-family like proteins
BOCCACLF_01240 1.9e-52
BOCCACLF_01242 3.9e-60 iap CBM50 M NlpC P60 family
BOCCACLF_01243 7.7e-61 merR K MerR family regulatory protein
BOCCACLF_01245 3.5e-49 K Transcriptional regulator PadR-like family
BOCCACLF_01246 8.2e-223 ydiC1 EGP Major facilitator Superfamily
BOCCACLF_01247 0.0 ydgH S MMPL family
BOCCACLF_01248 1.1e-15
BOCCACLF_01249 3.2e-125 IQ reductase
BOCCACLF_01250 5.3e-165 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BOCCACLF_01251 8.6e-131 S DUF218 domain
BOCCACLF_01252 1.6e-74 NU mannosyl-glycoprotein
BOCCACLF_01253 2.3e-179 pbpX1 V SH3-like domain
BOCCACLF_01254 2.8e-116 terC P Integral membrane protein TerC family
BOCCACLF_01255 2.1e-141 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
BOCCACLF_01256 7.4e-23
BOCCACLF_01257 3.1e-48 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
BOCCACLF_01258 3.7e-121 XK27_08845 S ABC transporter, ATP-binding protein
BOCCACLF_01259 2.8e-144 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
BOCCACLF_01260 1.7e-158 ABC-SBP S ABC transporter
BOCCACLF_01261 1e-122 degV S Uncharacterised protein, DegV family COG1307
BOCCACLF_01262 5.7e-143 XK27_00670 S ABC transporter
BOCCACLF_01263 6.7e-144 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
BOCCACLF_01264 1.3e-101 cmpC S ATPases associated with a variety of cellular activities
BOCCACLF_01265 5.1e-15 K Helix-turn-helix domain
BOCCACLF_01266 2e-49 L An automated process has identified a potential problem with this gene model
BOCCACLF_01267 3.4e-18 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
BOCCACLF_01268 8.7e-77 XK27_07075 S CAAX protease self-immunity
BOCCACLF_01269 4.2e-65 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BOCCACLF_01270 1.1e-286 S ABC transporter, ATP-binding protein
BOCCACLF_01271 6.5e-81 M ErfK YbiS YcfS YnhG
BOCCACLF_01272 3.3e-20
BOCCACLF_01273 2.7e-53 XK27_01125 L IS66 Orf2 like protein
BOCCACLF_01274 3.2e-177 L Transposase IS66 family
BOCCACLF_01275 2.6e-174 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
BOCCACLF_01276 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BOCCACLF_01277 4.7e-231 yfnA E Amino Acid
BOCCACLF_01278 2.1e-62 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
BOCCACLF_01279 6.3e-78 gmk2 2.7.4.8 F Guanylate kinase
BOCCACLF_01280 1.1e-67 zur P Belongs to the Fur family
BOCCACLF_01281 1.3e-11 3.2.1.14 GH18
BOCCACLF_01282 3.9e-133
BOCCACLF_01283 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BOCCACLF_01284 5.4e-134 glnH ET ABC transporter substrate-binding protein
BOCCACLF_01285 5.1e-108 gluC P ABC transporter permease
BOCCACLF_01286 4.1e-105 glnP P ABC transporter permease
BOCCACLF_01287 2.4e-205 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BOCCACLF_01288 2.9e-277 oppA E ABC transporter, substratebinding protein
BOCCACLF_01289 3.4e-273 oppA E ABC transporter, substratebinding protein
BOCCACLF_01290 4.9e-152 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
BOCCACLF_01291 1.3e-174 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
BOCCACLF_01292 1e-188 oppD P Belongs to the ABC transporter superfamily
BOCCACLF_01293 4.2e-175 oppF P Belongs to the ABC transporter superfamily
BOCCACLF_01294 1e-126 ssdA 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
BOCCACLF_01295 5.9e-197 yihP G MFS/sugar transport protein
BOCCACLF_01296 8.6e-82 tal 2.2.1.2 F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BOCCACLF_01297 8.9e-115 G isomerase
BOCCACLF_01298 1e-08 yihQ 3.2.1.177, 3.2.1.199 GH31 G Glycosyl hydrolases family 31
BOCCACLF_01299 1.3e-216 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOCCACLF_01300 1.8e-184 yicI 3.2.1.177, 3.2.1.199 GH31 G Belongs to the glycosyl hydrolase 31 family
BOCCACLF_01301 1.2e-101 G phosphoglycerate mutase
BOCCACLF_01302 5.1e-302 yjbQ P TrkA C-terminal domain protein
BOCCACLF_01303 0.0 helD 3.6.4.12 L DNA helicase
BOCCACLF_01304 1.6e-158 coaA 2.7.1.33 F Pantothenic acid kinase
BOCCACLF_01305 4.1e-80 aacA4_1 4.1.1.17 K acetyltransferase
BOCCACLF_01306 4.2e-297 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
BOCCACLF_01307 1.4e-16 K Helix-turn-helix domain
BOCCACLF_01309 2.2e-49 S Peptidase_C39 like family
BOCCACLF_01311 9.6e-08
BOCCACLF_01312 2.4e-10 L Transposase IS66 family
BOCCACLF_01313 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_01315 1.2e-22 K Cro/C1-type HTH DNA-binding domain
BOCCACLF_01317 8.6e-44 fldA C Flavodoxin
BOCCACLF_01321 2.3e-33 C Aldo/keto reductase family
BOCCACLF_01323 8.4e-39 fldA C Flavodoxin
BOCCACLF_01324 0.0 pepN 3.4.11.2 E aminopeptidase
BOCCACLF_01325 1.3e-257 pipD E Dipeptidase
BOCCACLF_01326 1.1e-144 gor 1.8.1.7 C Glutathione reductase
BOCCACLF_01327 4e-43 mgrA K helix_turn_helix multiple antibiotic resistance protein
BOCCACLF_01328 4e-283 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
BOCCACLF_01329 7.3e-267 abfA 3.2.1.55 GH51 G Alpha-L-arabinofuranosidase C-terminus
BOCCACLF_01330 1e-224 lacY G Oligosaccharide H symporter
BOCCACLF_01331 1.1e-194 abf G Belongs to the glycosyl hydrolase 43 family
BOCCACLF_01332 6.8e-65 K transcriptional regulator, ArsR family
BOCCACLF_01333 3.6e-235 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOCCACLF_01334 7.7e-76 K transcriptional regulator, ArsR family
BOCCACLF_01335 1.3e-177 araR K Transcriptional regulator
BOCCACLF_01336 1.4e-219 G symporter
BOCCACLF_01337 1.1e-132 yisR K helix_turn_helix, arabinose operon control protein
BOCCACLF_01338 0.0
BOCCACLF_01339 8.4e-269 araB 2.7.1.16 G carbohydrate kinase FGGY
BOCCACLF_01340 1.2e-132 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
BOCCACLF_01341 1.4e-270 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
BOCCACLF_01342 8.3e-78 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
BOCCACLF_01343 5.6e-208 U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
BOCCACLF_01345 4.9e-35 S Glycine cleavage H-protein
BOCCACLF_01346 2.7e-131 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
BOCCACLF_01347 4.6e-127 yejC S Protein of unknown function (DUF1003)
BOCCACLF_01348 2.8e-97 3.2.2.20 K acetyltransferase
BOCCACLF_01349 4.3e-45 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
BOCCACLF_01350 2e-54 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
BOCCACLF_01351 1.1e-66
BOCCACLF_01352 2.8e-206 pyrP F Permease
BOCCACLF_01353 2.3e-43 azlD S Branched-chain amino acid transport protein (AzlD)
BOCCACLF_01354 7.8e-110 azlC E branched-chain amino acid
BOCCACLF_01355 2.5e-36 yyaN K MerR HTH family regulatory protein
BOCCACLF_01356 2.8e-94 S Domain of unknown function (DUF4811)
BOCCACLF_01357 4.6e-170 lmrB EGP Major facilitator Superfamily
BOCCACLF_01358 9.2e-44 czcD P cation diffusion facilitator family transporter
BOCCACLF_01359 9.7e-115 sirR K iron dependent repressor
BOCCACLF_01360 5.2e-10
BOCCACLF_01361 8.9e-120 thrE S Putative threonine/serine exporter
BOCCACLF_01362 5.5e-64 S Threonine/Serine exporter, ThrE
BOCCACLF_01363 7.4e-110 lssY 3.6.1.27 I phosphatase
BOCCACLF_01364 6.3e-108 I alpha/beta hydrolase fold
BOCCACLF_01365 7.3e-31 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BOCCACLF_01366 7.9e-261 lysP E amino acid
BOCCACLF_01367 1.6e-109 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
BOCCACLF_01368 6.6e-208 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BOCCACLF_01378 4.3e-72 ctsR K Belongs to the CtsR family
BOCCACLF_01379 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BOCCACLF_01380 1.8e-86 K Bacterial regulatory proteins, tetR family
BOCCACLF_01381 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BOCCACLF_01382 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BOCCACLF_01384 3.4e-16 S Phage Mu protein F like protein
BOCCACLF_01385 3.5e-64 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
BOCCACLF_01386 1.2e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BOCCACLF_01387 4.6e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BOCCACLF_01388 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BOCCACLF_01389 3.3e-197 mepA V MATE efflux family protein
BOCCACLF_01390 8.9e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
BOCCACLF_01391 3.6e-117 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BOCCACLF_01392 1.4e-102 rplD J Forms part of the polypeptide exit tunnel
BOCCACLF_01393 3.4e-43 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BOCCACLF_01394 1.5e-147 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BOCCACLF_01395 2.6e-45 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BOCCACLF_01396 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BOCCACLF_01397 4.3e-118 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BOCCACLF_01398 1.2e-73 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BOCCACLF_01399 6.2e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
BOCCACLF_01400 4.7e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BOCCACLF_01401 1.3e-58 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BOCCACLF_01402 3.4e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BOCCACLF_01403 3.3e-92 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BOCCACLF_01404 3.9e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BOCCACLF_01405 8.1e-91 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BOCCACLF_01406 7.6e-53 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BOCCACLF_01407 5.8e-83 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BOCCACLF_01408 7.9e-22 rpmD J Ribosomal protein L30
BOCCACLF_01409 2.1e-68 rplO J Binds to the 23S rRNA
BOCCACLF_01410 2.2e-222 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BOCCACLF_01411 5.4e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BOCCACLF_01412 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BOCCACLF_01413 1e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
BOCCACLF_01414 3.3e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BOCCACLF_01415 4.9e-61 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BOCCACLF_01416 4.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BOCCACLF_01417 4.3e-62 rplQ J Ribosomal protein L17
BOCCACLF_01418 9.9e-128 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BOCCACLF_01419 7.4e-128 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BOCCACLF_01420 2e-130 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BOCCACLF_01421 1.3e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BOCCACLF_01422 4.7e-76 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BOCCACLF_01423 4.7e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
BOCCACLF_01424 3.7e-217 ktrB P Potassium uptake protein
BOCCACLF_01425 1.8e-103 ktrA P domain protein
BOCCACLF_01428 4.4e-74 1.3.1.9 S 2-nitropropane dioxygenase
BOCCACLF_01429 1.8e-176 asnA 6.3.1.1 F aspartate--ammonia ligase
BOCCACLF_01432 8.5e-241 yfnA E Amino Acid
BOCCACLF_01433 1.4e-163 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
BOCCACLF_01434 3.1e-142 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BOCCACLF_01435 2.5e-80 epsB M biosynthesis protein
BOCCACLF_01436 3.8e-97 ywqD 2.7.10.1 D Capsular exopolysaccharide family
BOCCACLF_01437 3.5e-103 ywqE 3.1.3.48 GM PHP domain protein
BOCCACLF_01438 5.2e-79 rfbP M Bacterial sugar transferase
BOCCACLF_01439 1.3e-83 cps1D M Domain of unknown function (DUF4422)
BOCCACLF_01440 2.5e-53 2.4.1.166 GT2 M Glycosyltransferase like family 2
BOCCACLF_01441 5e-32 MA20_43635 M Capsular polysaccharide synthesis protein
BOCCACLF_01442 2.1e-100 sacB GT2,GT4 M Stealth protein CR2, conserved region 2
BOCCACLF_01443 5.7e-13 epsV 2.7.8.12 S glycosyl transferase family 2
BOCCACLF_01444 5.4e-51 wbbI M transferase activity, transferring glycosyl groups
BOCCACLF_01445 3.1e-24
BOCCACLF_01446 5.8e-165 glf 5.4.99.9 M UDP-galactopyranose mutase
BOCCACLF_01447 2.2e-218 L Transposase
BOCCACLF_01448 1.4e-169 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
BOCCACLF_01449 7.4e-74 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BOCCACLF_01450 9.7e-154 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BOCCACLF_01454 3.3e-140 pdxB EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
BOCCACLF_01455 1.2e-266 cydA 1.10.3.14 C ubiquinol oxidase
BOCCACLF_01456 2e-175 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
BOCCACLF_01457 4.2e-274 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
BOCCACLF_01458 1.4e-306 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BOCCACLF_01459 4.2e-146 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
BOCCACLF_01460 4.5e-126 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
BOCCACLF_01462 9.6e-90 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BOCCACLF_01463 1.9e-182 purK2 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BOCCACLF_01464 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
BOCCACLF_01465 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BOCCACLF_01466 1.4e-164 camS S sex pheromone
BOCCACLF_01467 4.6e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BOCCACLF_01468 1.7e-252 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BOCCACLF_01469 3.6e-263 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BOCCACLF_01470 2.2e-174 yegS 2.7.1.107 G Lipid kinase
BOCCACLF_01471 1.7e-241 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BOCCACLF_01472 3.6e-31 K Antidote-toxin recognition MazE, bacterial antitoxin
BOCCACLF_01473 1.5e-156 L Transposase, IS116 IS110 IS902 family
BOCCACLF_01474 7.9e-82 csn 3.2.1.132 M Glycosyl hydrolase family 46
BOCCACLF_01475 5.7e-32 K Helix-turn-helix XRE-family like proteins
BOCCACLF_01476 1.5e-28 cro K Helix-turn-helix XRE-family like proteins
BOCCACLF_01478 3.3e-105 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BOCCACLF_01479 3.8e-218 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
BOCCACLF_01480 1.3e-120 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
BOCCACLF_01481 2.3e-152 deoR K sugar-binding domain protein
BOCCACLF_01482 8.2e-222 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
BOCCACLF_01483 2.6e-235 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
BOCCACLF_01484 1.1e-210 potE E amino acid
BOCCACLF_01485 3.2e-177 L Transposase IS66 family
BOCCACLF_01486 2.7e-53 XK27_01125 L IS66 Orf2 like protein
BOCCACLF_01487 3e-21
BOCCACLF_01488 1.4e-200 gntP EG Gluconate
BOCCACLF_01489 1.4e-292 gntK 2.7.1.12, 2.7.1.16, 2.7.1.17 G Belongs to the FGGY kinase family
BOCCACLF_01490 7.4e-153 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
BOCCACLF_01491 7.3e-109 gntR K rpiR family
BOCCACLF_01492 2e-49 L An automated process has identified a potential problem with this gene model
BOCCACLF_01494 4.7e-11 S Tetratricopeptide repeat
BOCCACLF_01495 3.1e-55
BOCCACLF_01496 2.4e-88 lys M Glycosyl hydrolases family 25
BOCCACLF_01497 5.5e-57 S Domain of unknown function (DUF4828)
BOCCACLF_01498 3.8e-150 mocA S Oxidoreductase
BOCCACLF_01499 6.5e-182 yfmL L DEAD DEAH box helicase
BOCCACLF_01501 1.5e-68 V Abi-like protein
BOCCACLF_01502 4.8e-68 T Universal stress protein family
BOCCACLF_01503 1.6e-212 gntP EG Gluconate
BOCCACLF_01504 6.5e-160 csbB 2.4.1.83 GT2 M Glycosyltransferase like family 2
BOCCACLF_01505 3.8e-183 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
BOCCACLF_01506 8.2e-146 S Nuclease-related domain
BOCCACLF_01507 1.4e-127 yihY S Belongs to the UPF0761 family
BOCCACLF_01508 2.3e-62 fld C Flavodoxin
BOCCACLF_01509 1.1e-110 recX 2.4.1.337 GT4 S Regulatory protein RecX
BOCCACLF_01510 7.1e-164 pbpX2 V Beta-lactamase
BOCCACLF_01511 7.1e-34 S Bacteriocin-protection, YdeI or OmpD-Associated
BOCCACLF_01512 5.4e-106 ygaC J Belongs to the UPF0374 family
BOCCACLF_01513 6.4e-149 yueF S AI-2E family transporter
BOCCACLF_01514 1.1e-74 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
BOCCACLF_01515 3.3e-113
BOCCACLF_01516 0.0 2.7.8.12 M glycerophosphotransferase
BOCCACLF_01517 6.4e-49
BOCCACLF_01518 6.5e-290 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BOCCACLF_01519 2.4e-239 XK27_00720 S Leucine-rich repeat (LRR) protein
BOCCACLF_01520 1.7e-233 nox 1.6.3.4 C NADH oxidase
BOCCACLF_01521 2.4e-251 pipD E Dipeptidase
BOCCACLF_01522 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
BOCCACLF_01523 4.9e-127 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
BOCCACLF_01524 0.0 clpE O Belongs to the ClpA ClpB family
BOCCACLF_01525 8.8e-22
BOCCACLF_01526 1.5e-37 ptsH G phosphocarrier protein HPR
BOCCACLF_01527 1.1e-261 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BOCCACLF_01529 5.5e-209 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
BOCCACLF_01530 3.2e-173 cpoA GT4 M Glycosyltransferase, group 1 family protein
BOCCACLF_01531 4.6e-167 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BOCCACLF_01532 2.8e-35 ykuJ S Protein of unknown function (DUF1797)
BOCCACLF_01533 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BOCCACLF_01534 3.5e-44 L Transposase DDE domain group 1
BOCCACLF_01535 1.5e-132 M NlpC/P60 family
BOCCACLF_01536 5.2e-36 K helix_turn_helix, Arsenical Resistance Operon Repressor
BOCCACLF_01537 3.9e-182 U Major Facilitator Superfamily
BOCCACLF_01538 2e-81 zmp2 O Zinc-dependent metalloprotease
BOCCACLF_01539 2.2e-218 L Transposase
BOCCACLF_01540 8.1e-46 ybjQ S Belongs to the UPF0145 family
BOCCACLF_01541 1.3e-46
BOCCACLF_01542 5.5e-32
BOCCACLF_01543 3.7e-83
BOCCACLF_01544 4.3e-201 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BOCCACLF_01545 6.7e-228 bmr3 EGP Major facilitator Superfamily
BOCCACLF_01546 1.8e-45 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
BOCCACLF_01547 5e-118 S haloacid dehalogenase-like hydrolase
BOCCACLF_01548 9.7e-115 dck 2.7.1.74 F Deoxynucleoside kinase
BOCCACLF_01549 2.5e-113 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
BOCCACLF_01550 0.0 trePP 2.4.1.216, 2.4.1.8, 3.1.3.12, 3.2.1.28 GH37,GH65 G Glycosyl hydrolase family 65 central catalytic domain
BOCCACLF_01551 3.1e-149 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BOCCACLF_01553 1.5e-156 L Transposase, IS116 IS110 IS902 family
BOCCACLF_01554 1.2e-78 S CAAX protease self-immunity
BOCCACLF_01555 3.4e-72 ohrR K Transcriptional regulator
BOCCACLF_01557 2.2e-218 L Transposase
BOCCACLF_01559 7.4e-56 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 M Leucine-rich repeat (LRR) protein
BOCCACLF_01560 1e-14 T SpoVT / AbrB like domain
BOCCACLF_01561 1.3e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
BOCCACLF_01562 1e-15 doc
BOCCACLF_01563 7.8e-155 L Transposase
BOCCACLF_01566 5e-42
BOCCACLF_01567 9.5e-57 V VanZ like family
BOCCACLF_01568 0.0 uvrA3 L excinuclease ABC
BOCCACLF_01569 1.3e-32
BOCCACLF_01570 1.2e-210 pipD E Peptidase family C69
BOCCACLF_01571 2.3e-98 ntcA2 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
BOCCACLF_01572 0.0 asnB 6.3.5.4 E Asparagine synthase
BOCCACLF_01573 4.6e-238 yxbA 6.3.1.12 S ATP-grasp enzyme
BOCCACLF_01574 1.5e-113 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
BOCCACLF_01575 9.8e-138 C Zinc-binding dehydrogenase
BOCCACLF_01576 3.7e-49 S Protein of unknown function (DUF1516)
BOCCACLF_01577 1.4e-55 1.5.1.3 H RibD C-terminal domain
BOCCACLF_01578 2.8e-190 3.2.1.96, 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
BOCCACLF_01579 2.5e-17
BOCCACLF_01581 7.5e-308 argS 6.1.1.19 J Arginyl-tRNA synthetase
BOCCACLF_01582 2.1e-58 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BOCCACLF_01583 3.2e-145 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BOCCACLF_01584 5.7e-103 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
BOCCACLF_01585 2.5e-29 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BOCCACLF_01586 1e-98 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BOCCACLF_01587 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BOCCACLF_01588 9e-238 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BOCCACLF_01589 7.3e-141 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
BOCCACLF_01590 4.4e-66 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BOCCACLF_01591 6.9e-157 purD 6.3.4.13 F Belongs to the GARS family
BOCCACLF_01592 6.4e-76 argR K Regulates arginine biosynthesis genes
BOCCACLF_01593 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BOCCACLF_01594 9.6e-37 yheA S Belongs to the UPF0342 family
BOCCACLF_01595 1.1e-148 yhaO L Ser Thr phosphatase family protein
BOCCACLF_01596 3.9e-287 L AAA domain
BOCCACLF_01597 2.2e-166 S Metal dependent phosphohydrolases with conserved 'HD' motif.
BOCCACLF_01598 1.7e-141 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
BOCCACLF_01599 1.1e-21
BOCCACLF_01600 3.5e-74 hit FG histidine triad
BOCCACLF_01602 3.3e-127 ecsA V ABC transporter, ATP-binding protein
BOCCACLF_01603 8.4e-184 ecsB U ABC transporter
BOCCACLF_01604 1.4e-139 ytmP 2.7.1.89 M Choline/ethanolamine kinase
BOCCACLF_01605 1.5e-112 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BOCCACLF_01606 1.7e-103 coiA 3.6.4.12 S Competence protein
BOCCACLF_01607 1.1e-304 pepF E oligoendopeptidase F
BOCCACLF_01608 9.3e-95 V ABC transporter transmembrane region
BOCCACLF_01609 3.1e-132 degV S DegV family
BOCCACLF_01610 1.9e-81 yjbH Q Thioredoxin
BOCCACLF_01611 1.7e-106 yjbM 2.7.6.5 S RelA SpoT domain protein
BOCCACLF_01612 4.8e-140 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BOCCACLF_01613 8.1e-144 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
BOCCACLF_01616 6.1e-190 S Pfam Methyltransferase
BOCCACLF_01617 2.1e-15
BOCCACLF_01618 6.5e-178 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
BOCCACLF_01619 1.3e-231 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
BOCCACLF_01620 6.5e-37 E D,D-heptose 1,7-bisphosphate phosphatase
BOCCACLF_01621 3.9e-96 JM COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BOCCACLF_01622 1.5e-52 M Psort location Cytoplasmic, score 8.96
BOCCACLF_01625 2e-104 murF 3.4.16.4, 6.3.2.10, 6.3.2.29, 6.3.2.30 M Bacterial capsule synthesis protein PGA_cap
BOCCACLF_01627 1.4e-78 cutC P Participates in the control of copper homeostasis
BOCCACLF_01628 6.1e-107 XK27_05220 S AI-2E family transporter
BOCCACLF_01629 7.2e-134 rrmA 2.1.1.187 H Methyltransferase
BOCCACLF_01630 2.7e-91 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BOCCACLF_01631 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
BOCCACLF_01632 3.8e-12 S Protein of unknown function (DUF4044)
BOCCACLF_01633 3.5e-42 S Protein of unknown function (DUF3397)
BOCCACLF_01634 1.4e-77 mraZ K Belongs to the MraZ family
BOCCACLF_01635 1.9e-164 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BOCCACLF_01636 6.8e-42 ftsL D Cell division protein FtsL
BOCCACLF_01637 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
BOCCACLF_01638 2.1e-174 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BOCCACLF_01639 2.3e-222 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BOCCACLF_01640 4.8e-183 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BOCCACLF_01641 2.9e-114 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BOCCACLF_01642 2.6e-223 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BOCCACLF_01643 7.8e-201 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BOCCACLF_01644 3.8e-62 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BOCCACLF_01645 2.2e-31 yggT S YGGT family
BOCCACLF_01646 1.6e-127 ylmH S S4 domain protein
BOCCACLF_01647 1e-80 divIVA D DivIVA domain protein
BOCCACLF_01648 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BOCCACLF_01649 2.8e-29 cspA K Cold shock protein
BOCCACLF_01650 2.2e-91 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
BOCCACLF_01651 4e-23
BOCCACLF_01652 1.5e-113 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BOCCACLF_01653 6e-203 iscS 2.8.1.7 E Aminotransferase class V
BOCCACLF_01654 6.9e-51 XK27_04120 S Putative amino acid metabolism
BOCCACLF_01655 1.5e-82 S ABC-2 family transporter protein
BOCCACLF_01656 5.5e-64 S ABC-2 family transporter protein
BOCCACLF_01657 2.9e-50 natA1 S abc transporter atp-binding protein
BOCCACLF_01658 2.1e-17 natA1 S ABC transporter
BOCCACLF_01659 3.5e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BOCCACLF_01661 1.3e-93 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
BOCCACLF_01662 8.2e-96 S Repeat protein
BOCCACLF_01663 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BOCCACLF_01664 1.2e-159 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BOCCACLF_01665 6.7e-106 yecS E ABC transporter permease
BOCCACLF_01666 4.3e-142 yckB ET Belongs to the bacterial solute-binding protein 3 family
BOCCACLF_01667 7.9e-237 nylA 3.5.1.4 J Belongs to the amidase family
BOCCACLF_01668 7.4e-260 E ABC transporter, substratebinding protein
BOCCACLF_01669 5.6e-47 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BOCCACLF_01670 2.8e-78 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BOCCACLF_01671 3.7e-174 yghZ C Aldo keto reductase family protein
BOCCACLF_01672 1.3e-163 rbsR K helix_turn _helix lactose operon repressor
BOCCACLF_01673 2.9e-149 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BOCCACLF_01674 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BOCCACLF_01676 3.1e-135 ykfC 3.4.14.13 M NlpC/P60 family
BOCCACLF_01677 2e-143 ypuA S Protein of unknown function (DUF1002)
BOCCACLF_01678 9.4e-45 ratA 3.5.1.104 CBM50 M NlpC P60 family protein
BOCCACLF_01679 3.6e-235 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOCCACLF_01680 4.6e-19 mltD CBM50 M NlpC P60 family protein
BOCCACLF_01681 1.6e-23
BOCCACLF_01682 4.4e-172 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
BOCCACLF_01683 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BOCCACLF_01684 5.5e-30 ykzG S Belongs to the UPF0356 family
BOCCACLF_01685 2.6e-54
BOCCACLF_01686 7.4e-95 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BOCCACLF_01687 1.7e-204 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
BOCCACLF_01688 3.2e-178 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
BOCCACLF_01689 2.4e-192 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
BOCCACLF_01690 1.6e-258 lpdA 1.8.1.4 C Dehydrogenase
BOCCACLF_01692 8.2e-120 1.1.1.27 C L-malate dehydrogenase activity
BOCCACLF_01693 2.3e-31 yktA S Belongs to the UPF0223 family
BOCCACLF_01694 2.2e-116 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
BOCCACLF_01695 0.0 typA T GTP-binding protein TypA
BOCCACLF_01696 3.8e-162 ftsW D Belongs to the SEDS family
BOCCACLF_01697 1.4e-31 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
BOCCACLF_01698 5.2e-88 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
BOCCACLF_01699 2.2e-63 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BOCCACLF_01700 2e-165 ylbL T Belongs to the peptidase S16 family
BOCCACLF_01701 2.4e-55 comEA L Competence protein ComEA
BOCCACLF_01702 3.4e-80 comEB 3.5.4.12 F ComE operon protein 2
BOCCACLF_01703 2.7e-289 comEC S Competence protein ComEC
BOCCACLF_01704 9.5e-165 holA 2.7.7.7 L DNA polymerase III delta subunit
BOCCACLF_01705 4.8e-33 rpsT J Binds directly to 16S ribosomal RNA
BOCCACLF_01707 3.9e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BOCCACLF_01708 4.1e-299 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BOCCACLF_01709 4.5e-105 S Tetratricopeptide repeat
BOCCACLF_01710 4e-223 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BOCCACLF_01711 2.6e-223 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BOCCACLF_01712 1.2e-222 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BOCCACLF_01713 1.6e-103 engB D Necessary for normal cell division and for the maintenance of normal septation
BOCCACLF_01714 2.1e-48 MA20_27270 S mazG nucleotide pyrophosphohydrolase
BOCCACLF_01715 2.5e-15
BOCCACLF_01716 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BOCCACLF_01717 9.3e-226 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BOCCACLF_01718 6.4e-78
BOCCACLF_01719 2.4e-25
BOCCACLF_01720 2e-164 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BOCCACLF_01721 3e-42 yrvD S Pfam:DUF1049
BOCCACLF_01722 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
BOCCACLF_01723 1.2e-88 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BOCCACLF_01724 1.3e-46 T AMP binding
BOCCACLF_01725 2.1e-155 yeaN P Transporter, major facilitator family protein
BOCCACLF_01727 1.1e-62
BOCCACLF_01728 3.6e-235 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOCCACLF_01729 3.8e-39 S MTH538 TIR-like domain (DUF1863)
BOCCACLF_01731 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_01732 6.7e-52 S Cupin superfamily (DUF985)
BOCCACLF_01734 4e-73 ndk 2.7.4.6 F Belongs to the NDK family
BOCCACLF_01735 1.5e-156 L Transposase, IS116 IS110 IS902 family
BOCCACLF_01736 1.9e-18 KT PspC domain
BOCCACLF_01737 2.9e-114 G phosphoglycerate mutase
BOCCACLF_01738 2.4e-132 S Polyphosphate nucleotide phosphotransferase, PPK2 family
BOCCACLF_01739 3.5e-179 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
BOCCACLF_01740 6.3e-52
BOCCACLF_01741 3.6e-68 F nucleoside 2-deoxyribosyltransferase
BOCCACLF_01742 6.3e-111 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BOCCACLF_01743 5.9e-28 ynzC S UPF0291 protein
BOCCACLF_01744 5.2e-31 yneF S Uncharacterised protein family (UPF0154)
BOCCACLF_01745 3.4e-295 mdlA V ABC transporter
BOCCACLF_01746 0.0 mdlB V ABC transporter
BOCCACLF_01747 2.3e-108 plsC 2.3.1.51 I Acyltransferase
BOCCACLF_01748 4.4e-119 yabB 2.1.1.223 L Methyltransferase small domain
BOCCACLF_01749 3.4e-37 yazA L GIY-YIG catalytic domain protein
BOCCACLF_01750 4.3e-178 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BOCCACLF_01751 2e-100 S Haloacid dehalogenase-like hydrolase
BOCCACLF_01752 7.2e-144 rpsB J Belongs to the universal ribosomal protein uS2 family
BOCCACLF_01753 2.3e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BOCCACLF_01754 8.5e-128 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
BOCCACLF_01755 2.8e-86 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BOCCACLF_01756 1.5e-71
BOCCACLF_01757 1.6e-119 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BOCCACLF_01758 3.3e-125 cdsA 2.7.7.41 I Belongs to the CDS family
BOCCACLF_01759 1.1e-218 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
BOCCACLF_01760 8.3e-307 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BOCCACLF_01761 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BOCCACLF_01762 1.2e-32
BOCCACLF_01763 6.5e-76 rimP J Required for maturation of 30S ribosomal subunits
BOCCACLF_01764 4.4e-188 nusA K Participates in both transcription termination and antitermination
BOCCACLF_01765 2e-43 ylxR K Protein of unknown function (DUF448)
BOCCACLF_01766 1e-37 ylxQ J ribosomal protein
BOCCACLF_01767 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BOCCACLF_01768 1.5e-53 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BOCCACLF_01769 1.4e-135 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BOCCACLF_01770 1.2e-153 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
BOCCACLF_01773 3.7e-185 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BOCCACLF_01774 6.2e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BOCCACLF_01775 5.2e-286 dnaK O Heat shock 70 kDa protein
BOCCACLF_01776 4.8e-173 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BOCCACLF_01777 1.5e-18 dltX S D-Ala-teichoic acid biosynthesis protein
BOCCACLF_01778 4.3e-254 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BOCCACLF_01779 2.6e-222 dltB M MBOAT, membrane-bound O-acyltransferase family
BOCCACLF_01780 1.8e-31 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BOCCACLF_01781 2.5e-223 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BOCCACLF_01782 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BOCCACLF_01783 1.3e-134 3.6.4.12 L Belongs to the 'phage' integrase family
BOCCACLF_01787 3.3e-36 D Anion-transporting ATPase
BOCCACLF_01788 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_01789 5.1e-44 S Protein of unknown function (DUF805)
BOCCACLF_01790 3.3e-16 KT response to antibiotic
BOCCACLF_01791 6.9e-74 S Pfam:Peptidase_M78
BOCCACLF_01792 8.3e-13 K Helix-turn-helix domain
BOCCACLF_01800 3.6e-07
BOCCACLF_01805 3.2e-67 recT L RecT family
BOCCACLF_01806 8.2e-81 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
BOCCACLF_01807 2.3e-17 L Replication initiation and membrane attachment
BOCCACLF_01808 3.1e-53 K AntA/AntB antirepressor
BOCCACLF_01810 4.1e-24 S VRR_NUC
BOCCACLF_01814 1.1e-27
BOCCACLF_01820 1.3e-41 arpU S Phage transcriptional regulator, ArpU family
BOCCACLF_01822 8.6e-17
BOCCACLF_01824 8.7e-34 ps333 L Terminase small subunit
BOCCACLF_01825 1e-166 S Phage terminase large subunit
BOCCACLF_01826 3.6e-260 S Protein of unknown function (DUF1073)
BOCCACLF_01827 2.6e-128 S Phage Mu protein F like protein
BOCCACLF_01829 2.4e-158 S Uncharacterized protein conserved in bacteria (DUF2213)
BOCCACLF_01830 4.4e-77
BOCCACLF_01831 3.5e-160 S Uncharacterized protein conserved in bacteria (DUF2184)
BOCCACLF_01832 1.2e-58
BOCCACLF_01833 1.5e-50 S Protein of unknown function (DUF4054)
BOCCACLF_01834 6.2e-108
BOCCACLF_01835 2.6e-67
BOCCACLF_01836 4.5e-61
BOCCACLF_01837 2.5e-141 S Protein of unknown function (DUF3383)
BOCCACLF_01838 4.8e-72
BOCCACLF_01839 5.3e-65
BOCCACLF_01841 6.8e-61 M by MetaGeneAnnotator
BOCCACLF_01842 2.6e-39 V Restriction endonuclease
BOCCACLF_01843 1.9e-129
BOCCACLF_01844 1.1e-107 S N-acetylmuramoyl-L-alanine amidase activity
BOCCACLF_01845 9.5e-65
BOCCACLF_01846 1.1e-213
BOCCACLF_01847 2.7e-55
BOCCACLF_01848 5.3e-10 S Protein of unknown function (DUF2634)
BOCCACLF_01849 8.8e-215 S Baseplate J-like protein
BOCCACLF_01850 1.7e-86
BOCCACLF_01851 8.6e-161
BOCCACLF_01852 1.9e-181 S RNA-directed DNA polymerase activity
BOCCACLF_01855 3.1e-20
BOCCACLF_01858 3.3e-91 M hydrolase, family 25
BOCCACLF_01860 8.4e-22 S mRNA binding
BOCCACLF_01861 2.5e-41 S HicB_like antitoxin of bacterial toxin-antitoxin system
BOCCACLF_01864 2.4e-54
BOCCACLF_01865 1.3e-27
BOCCACLF_01866 4.4e-99 F DNA/RNA non-specific endonuclease
BOCCACLF_01867 1.7e-13 F DNA/RNA non-specific endonuclease
BOCCACLF_01868 8.1e-21 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BOCCACLF_01869 1.4e-39 S Iron-sulphur cluster biosynthesis
BOCCACLF_01870 6.6e-48
BOCCACLF_01871 1.5e-164 prmA J Ribosomal protein L11 methyltransferase
BOCCACLF_01872 4.9e-102 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
BOCCACLF_01873 4.1e-32
BOCCACLF_01874 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BOCCACLF_01875 1e-59 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BOCCACLF_01876 1.3e-87 3.1.3.18 S HAD-hyrolase-like
BOCCACLF_01877 1.8e-88 S membrane transporter protein
BOCCACLF_01878 1.2e-55 K Bacterial regulatory proteins, tetR family
BOCCACLF_01879 5.8e-136 yniA G Fructosamine kinase
BOCCACLF_01880 1.1e-131 lytH 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
BOCCACLF_01881 4.1e-237 hisS 6.1.1.21 J histidyl-tRNA synthetase
BOCCACLF_01882 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BOCCACLF_01883 7.7e-78 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BOCCACLF_01884 4e-156 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
BOCCACLF_01885 1.1e-148 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
BOCCACLF_01886 7.8e-146 tagG U Transport permease protein
BOCCACLF_01887 3.8e-197 tagF1 2.7.8.12, 2.7.8.45 M glycerophosphotransferase
BOCCACLF_01888 5.6e-156 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BOCCACLF_01889 1.6e-141 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
BOCCACLF_01890 3.7e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
BOCCACLF_01891 3.9e-150 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
BOCCACLF_01892 2.5e-69 yqeY S YqeY-like protein
BOCCACLF_01893 1.9e-44 M Mycoplasma protein of unknown function, DUF285
BOCCACLF_01894 4.2e-170 phoH T phosphate starvation-inducible protein PhoH
BOCCACLF_01895 8.7e-84 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BOCCACLF_01896 9.1e-55 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
BOCCACLF_01897 6.4e-165 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BOCCACLF_01898 4.6e-138 recO L Involved in DNA repair and RecF pathway recombination
BOCCACLF_01899 2.1e-76 L Transposase DDE domain group 1
BOCCACLF_01900 6.2e-35 N Leucine rich repeats (6 copies)
BOCCACLF_01901 1.5e-140 C Aldo keto reductase
BOCCACLF_01902 4.7e-171 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
BOCCACLF_01903 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
BOCCACLF_01904 1.8e-307 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BOCCACLF_01905 4.6e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BOCCACLF_01906 4.6e-67 K Transcriptional regulator
BOCCACLF_01907 0.0 ydgH S MMPL family
BOCCACLF_01908 6.4e-104 trmK 2.1.1.217 S SAM-dependent methyltransferase
BOCCACLF_01909 6.4e-132 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BOCCACLF_01910 6.6e-221 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
BOCCACLF_01911 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BOCCACLF_01912 0.0 dnaE 2.7.7.7 L DNA polymerase
BOCCACLF_01913 1.4e-106 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
BOCCACLF_01914 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
BOCCACLF_01916 2.8e-144 cvfB S S1 domain
BOCCACLF_01917 5.4e-148 xerD D recombinase XerD
BOCCACLF_01918 2.7e-59 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BOCCACLF_01919 1.3e-113 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BOCCACLF_01920 7.7e-90 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BOCCACLF_01921 7e-114 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BOCCACLF_01922 1.4e-75 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BOCCACLF_01924 4.7e-103 ypbB 5.1.3.1 S Helix-turn-helix domain
BOCCACLF_01925 1.5e-197 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
BOCCACLF_01926 3.1e-20 yocH M Lysin motif
BOCCACLF_01927 3.4e-110 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
BOCCACLF_01928 1e-203 rpsA 1.17.7.4 J Ribosomal protein S1
BOCCACLF_01929 6.7e-232 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
BOCCACLF_01930 1.5e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BOCCACLF_01931 1.2e-214 S Tetratricopeptide repeat protein
BOCCACLF_01932 1.2e-139 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
BOCCACLF_01933 7.2e-180 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BOCCACLF_01934 0.0 yfmR S ABC transporter, ATP-binding protein
BOCCACLF_01935 5e-176 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BOCCACLF_01936 2.2e-71 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BOCCACLF_01937 5.1e-100 hlyIII S protein, hemolysin III
BOCCACLF_01938 2.3e-140 DegV S EDD domain protein, DegV family
BOCCACLF_01939 1.7e-120 ypmR E GDSL-like Lipase/Acylhydrolase
BOCCACLF_01940 6.9e-83 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
BOCCACLF_01941 1.6e-32 yozE S Belongs to the UPF0346 family
BOCCACLF_01942 5.2e-129 V ATPases associated with a variety of cellular activities
BOCCACLF_01943 6e-162 V ABC transporter
BOCCACLF_01944 1.9e-145 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BOCCACLF_01945 8e-116 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BOCCACLF_01946 2.1e-120 dprA LU DNA protecting protein DprA
BOCCACLF_01947 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BOCCACLF_01948 8.1e-155 xerC D Belongs to the 'phage' integrase family. XerC subfamily
BOCCACLF_01949 1.8e-93 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BOCCACLF_01950 3.2e-248 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BOCCACLF_01951 6.1e-136 lacX 5.1.3.3 G Aldose 1-epimerase
BOCCACLF_01952 6.5e-92 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BOCCACLF_01953 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BOCCACLF_01954 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BOCCACLF_01955 3.3e-175 K Transcriptional regulator
BOCCACLF_01956 4e-154 ppaC 3.6.1.1 C inorganic pyrophosphatase
BOCCACLF_01957 2.5e-61 zmp1 O PFAM peptidase M10A and M12B, matrixin and adamalysin
BOCCACLF_01958 3.6e-68 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
BOCCACLF_01959 7.6e-86 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BOCCACLF_01960 4.8e-44 3.6.1.55 F NUDIX domain
BOCCACLF_01962 8.8e-190 xerS L Belongs to the 'phage' integrase family
BOCCACLF_01963 3.8e-179 tas C Aldo/keto reductase family
BOCCACLF_01964 1.6e-58 S Protein of unknown function (DUF2812)
BOCCACLF_01965 2.2e-40 K Transcriptional regulator PadR-like family
BOCCACLF_01966 9.5e-35 K Helix-turn-helix domain
BOCCACLF_01967 7.8e-155 L Transposase
BOCCACLF_01968 2.9e-29
BOCCACLF_01969 8.5e-40 yvdC S MazG nucleotide pyrophosphohydrolase domain
BOCCACLF_01970 1.4e-224 norB EGP Major Facilitator
BOCCACLF_01971 1.3e-53 K transcriptional regulator
BOCCACLF_01972 1.1e-84 entB 3.5.1.19 Q Isochorismatase family
BOCCACLF_01973 5.6e-37 yafQ S endonuclease activity
BOCCACLF_01974 8e-34 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
BOCCACLF_01975 1.3e-108 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
BOCCACLF_01976 1.7e-21 yxjI S LURP-one-related
BOCCACLF_01977 3.1e-105 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BOCCACLF_01978 1.4e-16
BOCCACLF_01980 1.1e-118 S Alpha beta hydrolase
BOCCACLF_01981 1.8e-220 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BOCCACLF_01982 1.7e-76 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
BOCCACLF_01983 1.3e-174 L transposase, IS605 OrfB family
BOCCACLF_01984 8.1e-55 tlpA2 L COGs COG1943 Transposase and inactivated derivatives
BOCCACLF_01985 3.5e-91 S Bacterial protein of unknown function (DUF916)
BOCCACLF_01986 1.4e-60 V VanZ like family
BOCCACLF_01987 2.2e-62 gtcA S Teichoic acid glycosylation protein
BOCCACLF_01988 1.6e-70 folT S ECF transporter, substrate-specific component
BOCCACLF_01989 3.3e-150 degV S EDD domain protein, DegV family
BOCCACLF_01990 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_01991 1.3e-203 yxiO S Vacuole effluxer Atg22 like
BOCCACLF_01992 4.3e-215 npp S type I phosphodiesterase nucleotide pyrophosphatase
BOCCACLF_01993 1.8e-61 K Transcriptional regulator
BOCCACLF_01994 2.6e-276 FbpA K Fibronectin-binding protein
BOCCACLF_01995 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
BOCCACLF_01996 3.6e-199 carA 6.3.5.5 F Belongs to the CarA family
BOCCACLF_01997 3.2e-87 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BOCCACLF_01998 3.1e-159 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BOCCACLF_01999 9.9e-69 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BOCCACLF_02000 1.7e-107 aroD S Serine hydrolase (FSH1)
BOCCACLF_02002 5.6e-292 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
BOCCACLF_02003 2.3e-53 esbA S Family of unknown function (DUF5322)
BOCCACLF_02004 4.4e-49 rnhA 3.1.26.4 L Ribonuclease HI
BOCCACLF_02005 3.7e-178 yurR 1.4.5.1 E FAD dependent oxidoreductase
BOCCACLF_02006 1.9e-96 XK27_02070 S Nitroreductase family
BOCCACLF_02007 2e-232 ypwA 3.4.17.19 E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BOCCACLF_02008 7e-47 K Bacterial regulatory proteins, tetR family
BOCCACLF_02009 2.8e-85 S CAAX protease self-immunity
BOCCACLF_02010 1.9e-40
BOCCACLF_02011 2.3e-57 mutT 3.6.1.55 F Belongs to the Nudix hydrolase family
BOCCACLF_02012 5.2e-92 I transferase activity, transferring acyl groups other than amino-acyl groups
BOCCACLF_02013 2e-07
BOCCACLF_02014 2.5e-210 amtB P ammonium transporter
BOCCACLF_02015 1e-69 K Helix-turn-helix domain
BOCCACLF_02016 4.8e-294 L ABC transporter
BOCCACLF_02017 9e-60 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
BOCCACLF_02018 1.4e-105 MA20_01270 K Bacterial transcription activator, effector binding domain
BOCCACLF_02019 4e-55 FG Scavenger mRNA decapping enzyme C-term binding
BOCCACLF_02020 9.4e-214 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
BOCCACLF_02022 1.1e-32 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BOCCACLF_02023 6.8e-96 ypsA S Belongs to the UPF0398 family
BOCCACLF_02024 2.1e-76 L Transposase DDE domain group 1
BOCCACLF_02025 5.2e-94 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BOCCACLF_02026 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
BOCCACLF_02027 3.2e-38 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
BOCCACLF_02028 4.4e-92 ccpB 5.1.1.1 K lacI family
BOCCACLF_02029 6.1e-58 yceE S haloacid dehalogenase-like hydrolase
BOCCACLF_02030 1.9e-103 dnaD L Replication initiation and membrane attachment
BOCCACLF_02031 9.3e-164 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
BOCCACLF_02032 5.3e-60 ypmB S Protein conserved in bacteria
BOCCACLF_02033 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
BOCCACLF_02034 2e-132 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
BOCCACLF_02035 1e-136 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
BOCCACLF_02036 1.4e-190 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
BOCCACLF_02037 1e-150 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
BOCCACLF_02038 3.8e-233 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
BOCCACLF_02039 1.1e-134 yitU 3.1.3.104 S hydrolase
BOCCACLF_02040 4.6e-160 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
BOCCACLF_02041 7.9e-277 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BOCCACLF_02042 1.4e-26 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
BOCCACLF_02043 4.3e-137 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
BOCCACLF_02044 6.8e-238 pipD E Dipeptidase
BOCCACLF_02045 2e-251 yjeM E Amino Acid
BOCCACLF_02046 2.3e-56 S Alpha/beta hydrolase of unknown function (DUF915)
BOCCACLF_02047 5.5e-311 kup P Transport of potassium into the cell
BOCCACLF_02048 1.2e-72 K Helix-turn-helix
BOCCACLF_02050 1.2e-101 yhgE V domain protein
BOCCACLF_02051 1.6e-58 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BOCCACLF_02052 3.3e-141 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
BOCCACLF_02053 5.8e-78 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BOCCACLF_02054 6.6e-38 ylqC S Belongs to the UPF0109 family
BOCCACLF_02055 8.5e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
BOCCACLF_02056 1.3e-29
BOCCACLF_02057 6.7e-155 S Putative metallopeptidase domain
BOCCACLF_02058 1.3e-165 3.1.3.1 S associated with various cellular activities
BOCCACLF_02059 0.0 pacL 3.6.3.8 P P-type ATPase
BOCCACLF_02060 2.9e-191 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BOCCACLF_02061 2.5e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BOCCACLF_02062 1.4e-164 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BOCCACLF_02063 2.9e-301 smc D Required for chromosome condensation and partitioning
BOCCACLF_02064 2e-121 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BOCCACLF_02065 6.2e-33 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BOCCACLF_02066 5.8e-170 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BOCCACLF_02067 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BOCCACLF_02068 1.5e-292 yloV S DAK2 domain fusion protein YloV
BOCCACLF_02069 3.7e-55 asp S Asp23 family, cell envelope-related function
BOCCACLF_02070 2.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
BOCCACLF_02071 7.5e-110 thiN 2.7.6.2 H thiamine pyrophosphokinase
BOCCACLF_02072 2.2e-114 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
BOCCACLF_02073 1.9e-145 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BOCCACLF_02074 6.5e-282 prkC 2.7.11.1 KLT serine threonine protein kinase
BOCCACLF_02075 2.1e-113 stp 3.1.3.16 T phosphatase
BOCCACLF_02076 7.6e-231 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BOCCACLF_02077 1.9e-159 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BOCCACLF_02078 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BOCCACLF_02079 4.1e-175 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BOCCACLF_02080 8.4e-31 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
BOCCACLF_02081 3.5e-106 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
BOCCACLF_02082 1.1e-34
BOCCACLF_02083 7.5e-52 M domain protein
BOCCACLF_02084 5.8e-276 recN L May be involved in recombinational repair of damaged DNA
BOCCACLF_02085 1.4e-75 argR K Regulates arginine biosynthesis genes
BOCCACLF_02086 1.1e-134 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
BOCCACLF_02087 9e-135 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
BOCCACLF_02088 1.3e-30 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BOCCACLF_02089 5.9e-199 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BOCCACLF_02090 1.2e-131 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BOCCACLF_02091 1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BOCCACLF_02092 2.6e-71 yqhY S Asp23 family, cell envelope-related function
BOCCACLF_02093 1e-96 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BOCCACLF_02094 6e-154 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BOCCACLF_02095 5.2e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
BOCCACLF_02096 3.7e-49 ysxB J Cysteine protease Prp
BOCCACLF_02097 3.4e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
BOCCACLF_02098 1e-55 K Transcriptional regulator
BOCCACLF_02099 1.2e-89 dut S Protein conserved in bacteria
BOCCACLF_02100 3e-165
BOCCACLF_02101 1.6e-141
BOCCACLF_02102 8.1e-257 glnA 6.3.1.2 E glutamine synthetase
BOCCACLF_02103 1e-55 glnR K Transcriptional regulator
BOCCACLF_02104 2.1e-134 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BOCCACLF_02105 8.1e-121 glpQ 3.1.4.46 C phosphodiesterase
BOCCACLF_02106 1.2e-22 WQ51_02665 S Protein of unknown function (DUF3042)
BOCCACLF_02107 8.5e-48 yqhL P Rhodanese-like protein
BOCCACLF_02108 1.9e-178 glk 2.7.1.2 G Glucokinase
BOCCACLF_02109 1.9e-28 yqgQ S Bacterial protein of unknown function (DUF910)
BOCCACLF_02110 1.7e-106 gluP 3.4.21.105 S Peptidase, S54 family
BOCCACLF_02111 4.3e-63 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BOCCACLF_02112 9.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BOCCACLF_02113 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
BOCCACLF_02114 0.0 S membrane
BOCCACLF_02115 1.5e-49 yneR S Belongs to the HesB IscA family
BOCCACLF_02116 1.3e-76 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BOCCACLF_02117 2.5e-113 udk 2.7.1.48 F Cytidine monophosphokinase
BOCCACLF_02118 4e-180 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BOCCACLF_02119 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BOCCACLF_02120 1.3e-196 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BOCCACLF_02121 1.3e-55 yodB K Transcriptional regulator, HxlR family
BOCCACLF_02122 4.6e-88 2.7.7.19, 2.7.7.72 S Metal dependent phosphohydrolases with conserved 'HD' motif.
BOCCACLF_02123 3.2e-117 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BOCCACLF_02124 4.3e-24 acyP 3.6.1.7 C Belongs to the acylphosphatase family
BOCCACLF_02125 2.1e-115 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BOCCACLF_02126 4.2e-39 S Protein of unknown function (DUF1093)
BOCCACLF_02127 3.5e-241 arlS 2.7.13.3 T Histidine kinase
BOCCACLF_02128 6.2e-120 K response regulator
BOCCACLF_02129 6.9e-192 adhP 1.1.1.1 C alcohol dehydrogenase
BOCCACLF_02130 6.6e-39 zmp3 O Zinc-dependent metalloprotease
BOCCACLF_02131 3e-71 zmp3 O Zinc-dependent metalloprotease
BOCCACLF_02133 1.4e-86 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
BOCCACLF_02134 1.6e-81 yceD S Uncharacterized ACR, COG1399
BOCCACLF_02135 1.1e-182 ylbM S Belongs to the UPF0348 family
BOCCACLF_02136 1.8e-125 yqeM Q Methyltransferase
BOCCACLF_02137 6e-50 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BOCCACLF_02138 6.8e-86 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
BOCCACLF_02139 1.7e-111 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BOCCACLF_02140 8.1e-43 yhbY J RNA-binding protein
BOCCACLF_02141 6.3e-210 yqeH S Ribosome biogenesis GTPase YqeH
BOCCACLF_02142 8.7e-93 yqeG S HAD phosphatase, family IIIA
BOCCACLF_02143 1.5e-53 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BOCCACLF_02144 2.1e-25 rpmI J Belongs to the bacterial ribosomal protein bL35 family
BOCCACLF_02145 2e-79 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BOCCACLF_02146 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BOCCACLF_02147 3.1e-154 dnaI L Primosomal protein DnaI
BOCCACLF_02148 7.1e-176 dnaB L replication initiation and membrane attachment
BOCCACLF_02149 4.2e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BOCCACLF_02150 1.1e-81 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BOCCACLF_02151 5.6e-142 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BOCCACLF_02152 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BOCCACLF_02153 4.9e-96 ybhL S Belongs to the BI1 family
BOCCACLF_02154 1.2e-113 pnuC H nicotinamide mononucleotide transporter
BOCCACLF_02155 1.5e-247 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
BOCCACLF_02156 2.4e-290 sftA D Belongs to the FtsK SpoIIIE SftA family
BOCCACLF_02157 3e-100 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BOCCACLF_02158 3.5e-52 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
BOCCACLF_02159 2.7e-49 ytzB S Small secreted protein
BOCCACLF_02160 1.4e-73 uspA T Belongs to the universal stress protein A family
BOCCACLF_02161 3.2e-232 pepV 3.5.1.18 E dipeptidase PepV
BOCCACLF_02162 9.6e-107 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BOCCACLF_02163 2.8e-67 rluB 5.4.99.19, 5.4.99.20, 5.4.99.21, 5.4.99.22 J pseudouridine synthase activity
BOCCACLF_02164 2.4e-271 ytgP S Polysaccharide biosynthesis protein
BOCCACLF_02165 3.2e-42
BOCCACLF_02166 2.5e-131 S NADPH-dependent FMN reductase
BOCCACLF_02167 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
BOCCACLF_02168 5.3e-81 pgpB1 3.6.1.27 I Acid phosphatase homologues
BOCCACLF_02169 3.1e-85 ytqB J Putative rRNA methylase
BOCCACLF_02170 1.3e-227 pgaC GT2 M Glycosyl transferase
BOCCACLF_02171 1.5e-70
BOCCACLF_02172 7.3e-112 T EAL domain
BOCCACLF_02173 4.3e-103 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BOCCACLF_02174 9.9e-65 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BOCCACLF_02175 6.2e-113 yhfI S Metallo-beta-lactamase superfamily
BOCCACLF_02176 1.8e-60 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
BOCCACLF_02177 5.3e-191 N Uncharacterized conserved protein (DUF2075)
BOCCACLF_02178 9.4e-215 isp L Transposase
BOCCACLF_02197 2.6e-62 yugI 5.3.1.9 J general stress protein
BOCCACLF_02198 5.2e-107 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BOCCACLF_02199 2.2e-77 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
BOCCACLF_02200 2.7e-112 dedA S SNARE-like domain protein
BOCCACLF_02201 4.1e-86 S Protein of unknown function (DUF1461)
BOCCACLF_02202 2.6e-133 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BOCCACLF_02203 1.3e-61 yutD S Protein of unknown function (DUF1027)
BOCCACLF_02204 2.3e-222 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
BOCCACLF_02205 1.8e-102 S Calcineurin-like phosphoesterase
BOCCACLF_02206 5e-127 yeaE S Aldo keto
BOCCACLF_02207 1.6e-226 cycA E Amino acid permease
BOCCACLF_02208 4.9e-205 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BOCCACLF_02209 6.8e-163 ytxK 2.1.1.72 L N-6 DNA Methylase
BOCCACLF_02210 1.7e-35
BOCCACLF_02212 1e-22
BOCCACLF_02213 3.8e-24 comGC U competence protein ComGC
BOCCACLF_02214 3.6e-111 comGB NU type II secretion system
BOCCACLF_02215 1.8e-109 comGA NU Type II IV secretion system protein
BOCCACLF_02216 1.3e-126 yebC K Transcriptional regulatory protein
BOCCACLF_02217 5.6e-243 glnPH2 P ABC transporter permease
BOCCACLF_02218 2.5e-122 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BOCCACLF_02219 4.8e-76 N Leucine rich repeats (6 copies)
BOCCACLF_02220 3.6e-235 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOCCACLF_02221 1.3e-07 N Leucine rich repeats (6 copies)
BOCCACLF_02222 2.8e-06
BOCCACLF_02223 7.4e-07
BOCCACLF_02225 4e-12
BOCCACLF_02226 4.5e-25 M domain protein
BOCCACLF_02227 3.3e-83
BOCCACLF_02228 6.2e-177 ccpA K catabolite control protein A
BOCCACLF_02229 5e-204 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BOCCACLF_02230 1.8e-35
BOCCACLF_02231 1.6e-14 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BOCCACLF_02232 1.1e-124 ykuT M mechanosensitive ion channel
BOCCACLF_02234 1.6e-64 ykuL S (CBS) domain
BOCCACLF_02235 1.1e-84 S Phosphoesterase
BOCCACLF_02236 6.5e-97 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BOCCACLF_02237 8.4e-95 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
BOCCACLF_02238 9.8e-70 yslB S Protein of unknown function (DUF2507)
BOCCACLF_02239 2.4e-50 trxA O Belongs to the thioredoxin family
BOCCACLF_02240 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BOCCACLF_02241 1.5e-47 cvpA S Colicin V production protein
BOCCACLF_02242 4.4e-29 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BOCCACLF_02243 2e-49 yrzB S Belongs to the UPF0473 family
BOCCACLF_02244 8.7e-67 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BOCCACLF_02245 4.4e-43 yrzL S Belongs to the UPF0297 family
BOCCACLF_02246 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BOCCACLF_02247 9.1e-232 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BOCCACLF_02248 1.1e-162 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
BOCCACLF_02249 9e-185 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BOCCACLF_02250 1.3e-25 yajC U Preprotein translocase
BOCCACLF_02251 9.5e-214 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
BOCCACLF_02252 2.9e-185 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BOCCACLF_02253 1.1e-178 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BOCCACLF_02254 2.5e-96 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BOCCACLF_02255 4e-308 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BOCCACLF_02256 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BOCCACLF_02257 3.3e-141 ymdB S YmdB-like protein
BOCCACLF_02258 8.1e-208 rny S Endoribonuclease that initiates mRNA decay
BOCCACLF_02259 1.3e-175 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BOCCACLF_02260 1e-189 cinA 3.5.1.42 S Belongs to the CinA family
BOCCACLF_02261 1.8e-91 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BOCCACLF_02262 1.1e-61 ymfM S Domain of unknown function (DUF4115)
BOCCACLF_02263 6.7e-216 ymfH S Peptidase M16
BOCCACLF_02264 2.5e-191 ymfF S Peptidase M16 inactive domain protein
BOCCACLF_02265 5.1e-140 aatB ET ABC transporter substrate-binding protein
BOCCACLF_02266 1.2e-96 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BOCCACLF_02267 2e-104 glnP P ABC transporter permease
BOCCACLF_02268 3.9e-145 minD D Belongs to the ParA family
BOCCACLF_02269 6.1e-104 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
BOCCACLF_02270 4e-74 mreD M rod shape-determining protein MreD
BOCCACLF_02271 5.2e-124 mreC M Involved in formation and maintenance of cell shape
BOCCACLF_02272 2.6e-159 mreB D cell shape determining protein MreB
BOCCACLF_02273 1.1e-86 radC L DNA repair protein
BOCCACLF_02274 4.9e-206 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
BOCCACLF_02275 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BOCCACLF_02276 1.6e-80 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BOCCACLF_02277 7.4e-217 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BOCCACLF_02278 4.3e-206 iscS2 2.8.1.7 E Aminotransferase class V
BOCCACLF_02279 5e-243 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BOCCACLF_02280 5e-68 ytsP 1.8.4.14 T GAF domain-containing protein
BOCCACLF_02281 2.4e-107 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BOCCACLF_02282 8.5e-70 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
BOCCACLF_02283 3.3e-35
BOCCACLF_02284 4e-18
BOCCACLF_02285 2.2e-218 L Transposase
BOCCACLF_02292 1.3e-35
BOCCACLF_02293 2.4e-41 S Uncharacterised protein conserved in bacteria (DUF2313)
BOCCACLF_02294 4.8e-125 xkdT S Baseplate J-like protein
BOCCACLF_02295 4.3e-42 S Protein of unknown function (DUF2634)
BOCCACLF_02296 2.3e-34 S Protein of unknown function (DUF2577)
BOCCACLF_02297 5.1e-121 yqbQ G PFAM Phage late control gene D protein (GPD)
BOCCACLF_02298 2.6e-73 S protein containing LysM domain
BOCCACLF_02299 2.1e-135 S phage tail tape measure protein
BOCCACLF_02300 6.3e-19 xkdN S Phage XkdN-like tail assembly chaperone protein, TAC
BOCCACLF_02301 3.9e-68 xkdM S Phage tail tube protein
BOCCACLF_02302 5.3e-147 xkdK S Phage tail sheath C-terminal domain
BOCCACLF_02304 3.1e-29
BOCCACLF_02305 2.3e-37 S Bacteriophage HK97-gp10, putative tail-component
BOCCACLF_02306 1.9e-46
BOCCACLF_02307 3.9e-42
BOCCACLF_02308 1.9e-135
BOCCACLF_02309 3.1e-34 S Phage minor structural protein GP20
BOCCACLF_02311 6e-120 S Phage Mu protein F like protein
BOCCACLF_02312 7.9e-202 S Phage portal protein, SPP1 Gp6-like
BOCCACLF_02313 7.4e-212 S Terminase RNAseH like domain
BOCCACLF_02314 3e-35 L Terminase small subunit
BOCCACLF_02316 4.6e-109 L Transposase and inactivated derivatives, IS30 family
BOCCACLF_02318 9.9e-51
BOCCACLF_02321 1.6e-22 S sequence-specific DNA binding
BOCCACLF_02326 3.7e-28
BOCCACLF_02330 7e-18 S Protein of unknwon function (DUF3310)
BOCCACLF_02332 2.7e-71 pi346 L IstB-like ATP binding protein
BOCCACLF_02333 1.9e-74 L DnaD domain protein
BOCCACLF_02334 5.5e-87 S Putative HNHc nuclease
BOCCACLF_02335 1.2e-45 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BOCCACLF_02336 1.6e-25 S ERF superfamily
BOCCACLF_02337 2.9e-22 S Bacteriophage Mu Gam like protein
BOCCACLF_02341 4.9e-07 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BOCCACLF_02344 1.4e-90 S DNA binding
BOCCACLF_02345 3.1e-14
BOCCACLF_02349 7e-13
BOCCACLF_02350 5.7e-28 ps115 K Helix-turn-helix XRE-family like proteins
BOCCACLF_02351 9.2e-18 S Pfam:Peptidase_M78
BOCCACLF_02352 1.4e-28
BOCCACLF_02353 2.9e-58 L Belongs to the 'phage' integrase family
BOCCACLF_02354 7.2e-120 K AI-2E family transporter
BOCCACLF_02355 1.9e-93 yktB S Belongs to the UPF0637 family
BOCCACLF_02356 4.5e-58 yueI S Protein of unknown function (DUF1694)
BOCCACLF_02357 2.2e-211 rarA L recombination factor protein RarA
BOCCACLF_02359 4e-28
BOCCACLF_02360 7.8e-77 usp6 T universal stress protein
BOCCACLF_02361 8e-117 2.3.1.19 K Helix-turn-helix XRE-family like proteins
BOCCACLF_02362 2.1e-163 L Probable transposase
BOCCACLF_02363 3.7e-155 glpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
BOCCACLF_02364 3.3e-198 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
BOCCACLF_02365 6.8e-128 S Protein of unknown function (DUF2785)
BOCCACLF_02366 9.7e-123 f42a O Band 7 protein
BOCCACLF_02367 3.4e-46 gcsH2 E glycine cleavage
BOCCACLF_02368 1.6e-211 rodA D Belongs to the SEDS family
BOCCACLF_02369 2.2e-29 S Protein of unknown function (DUF2969)
BOCCACLF_02370 9.4e-41 yidD S Could be involved in insertion of integral membrane proteins into the membrane
BOCCACLF_02371 1.2e-175 mbl D Cell shape determining protein MreB Mrl
BOCCACLF_02372 5.7e-231 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BOCCACLF_02373 3.4e-30 ywzB S Protein of unknown function (DUF1146)
BOCCACLF_02374 3.6e-54 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
BOCCACLF_02375 2.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BOCCACLF_02376 1.7e-154 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BOCCACLF_02377 1.7e-274 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BOCCACLF_02378 1.5e-81 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BOCCACLF_02379 3.3e-49 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BOCCACLF_02380 1.4e-25 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BOCCACLF_02381 7.7e-113 atpB C it plays a direct role in the translocation of protons across the membrane
BOCCACLF_02382 2.1e-106 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BOCCACLF_02383 3.6e-211 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BOCCACLF_02384 1.8e-174 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BOCCACLF_02385 5.7e-99 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BOCCACLF_02386 3.4e-181 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BOCCACLF_02387 3.3e-101 tdk 2.7.1.21 F thymidine kinase
BOCCACLF_02388 1.5e-242 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
BOCCACLF_02389 6e-126 cobQ S glutamine amidotransferase
BOCCACLF_02390 1.2e-154 ampC V Beta-lactamase
BOCCACLF_02391 6.2e-308 yfiC V ABC transporter
BOCCACLF_02392 1.5e-295 lmrA V ABC transporter, ATP-binding protein
BOCCACLF_02393 3.7e-46
BOCCACLF_02394 1.1e-14
BOCCACLF_02395 1.1e-14 2.7.7.65 T diguanylate cyclase
BOCCACLF_02396 8.6e-85 2.7.7.65 T Diguanylate cyclase, GGDEF domain
BOCCACLF_02397 9e-100 yliE T Putative diguanylate phosphodiesterase
BOCCACLF_02398 6.5e-33 S Membrane
BOCCACLF_02399 2.3e-108 XK27_00720 S Leucine-rich repeat (LRR) protein
BOCCACLF_02402 1.7e-162 sip L Belongs to the 'phage' integrase family
BOCCACLF_02403 9.8e-10
BOCCACLF_02406 7.5e-10 zmp2 O Zinc-dependent metalloprotease
BOCCACLF_02408 0.0 S Bacterial membrane protein YfhO
BOCCACLF_02409 1.3e-243 pgi 5.3.1.9 G Belongs to the GPI family
BOCCACLF_02410 1.1e-140 glcU U sugar transport
BOCCACLF_02411 6.4e-162 ywbD 2.1.1.191 J S-adenosylmethionine-dependent methyltransferase
BOCCACLF_02413 1.1e-249 T PhoQ Sensor
BOCCACLF_02414 9.6e-127 K response regulator
BOCCACLF_02416 5.9e-28
BOCCACLF_02417 1e-20
BOCCACLF_02418 3.3e-39 S Virulence-associated protein E
BOCCACLF_02419 7.8e-155 L Transposase
BOCCACLF_02420 1.3e-110 S Virulence-associated protein E
BOCCACLF_02421 3.8e-65 L Primase C terminal 1 (PriCT-1)
BOCCACLF_02425 5.4e-09
BOCCACLF_02426 1.4e-06 K Cro/C1-type HTH DNA-binding domain
BOCCACLF_02427 8.4e-90 S KilA-N domain
BOCCACLF_02428 5e-130 sip L Belongs to the 'phage' integrase family
BOCCACLF_02430 9.4e-19
BOCCACLF_02431 2.7e-20 arpU S Phage transcriptional regulator, ArpU family
BOCCACLF_02432 7.8e-155 L Transposase
BOCCACLF_02433 3.7e-97 gepA S Protein of unknown function (DUF4065)
BOCCACLF_02434 3e-32 S Motility quorum-sensing regulator, toxin of MqsA
BOCCACLF_02436 6e-255 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
BOCCACLF_02437 5.9e-63 S haloacid dehalogenase-like hydrolase
BOCCACLF_02438 9.9e-26 2.7.11.1, 3.6.4.13 S domain, Protein
BOCCACLF_02439 9.7e-42 M PFAM NLP P60 protein
BOCCACLF_02440 2.1e-198 E Bacterial extracellular solute-binding proteins, family 5 Middle
BOCCACLF_02441 5.1e-214 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
BOCCACLF_02442 1.5e-78
BOCCACLF_02443 1.7e-34 ypaA S Protein of unknown function (DUF1304)
BOCCACLF_02444 1.1e-12
BOCCACLF_02445 4e-67 O OsmC-like protein
BOCCACLF_02446 4.4e-14
BOCCACLF_02447 6.1e-68 K Transcriptional regulator
BOCCACLF_02448 2.4e-40 S Domain of unknown function (DUF5067)
BOCCACLF_02449 4.1e-118 licD M LicD family
BOCCACLF_02450 5.8e-251 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
BOCCACLF_02451 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BOCCACLF_02452 6.5e-144 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
BOCCACLF_02453 0.0 norZ 1.7.2.5 P Cytochrome C and Quinol oxidase polypeptide I
BOCCACLF_02454 2.5e-93 fhuC 3.6.3.34 HP ABC transporter, ATP-binding protein
BOCCACLF_02455 7.9e-137 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BOCCACLF_02456 1.4e-127 isdE P Periplasmic binding protein
BOCCACLF_02457 6.2e-55 M Iron Transport-associated domain
BOCCACLF_02458 9.1e-95 M Iron Transport-associated domain
BOCCACLF_02459 3.1e-48 S Iron Transport-associated domain
BOCCACLF_02460 7.3e-44
BOCCACLF_02461 3.4e-84 Q Psort location Cytoplasmic, score
BOCCACLF_02463 3e-185 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
BOCCACLF_02464 1.2e-170 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BOCCACLF_02465 2.7e-113 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BOCCACLF_02466 8.5e-12
BOCCACLF_02467 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BOCCACLF_02468 3.3e-242 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BOCCACLF_02469 3.7e-102 ybbR S YbbR-like protein
BOCCACLF_02470 1e-143 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BOCCACLF_02471 5.3e-100 S Protein of unknown function (DUF1361)
BOCCACLF_02472 0.0 yjcE P Sodium proton antiporter
BOCCACLF_02473 1.6e-142 murB 1.3.1.98 M Cell wall formation
BOCCACLF_02474 2.2e-134 xth 3.1.11.2 L exodeoxyribonuclease III
BOCCACLF_02475 1.4e-98 dnaQ 2.7.7.7 L DNA polymerase III
BOCCACLF_02476 4.5e-151 C Aldo keto reductase family protein
BOCCACLF_02477 4.8e-72 K Acetyltransferase (GNAT) domain
BOCCACLF_02478 2.2e-71 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
BOCCACLF_02479 7.6e-164 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
BOCCACLF_02480 3.8e-128 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BOCCACLF_02481 5.2e-72 yxjI
BOCCACLF_02482 1.9e-136 M Mycoplasma protein of unknown function, DUF285
BOCCACLF_02483 8.5e-115 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BOCCACLF_02484 5e-76 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BOCCACLF_02485 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BOCCACLF_02486 7.7e-116 est 3.1.1.1 S Serine aminopeptidase, S33
BOCCACLF_02487 1.6e-30 secG U Preprotein translocase
BOCCACLF_02488 1.8e-236 clcA P chloride
BOCCACLF_02490 9.1e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BOCCACLF_02491 2.2e-126 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BOCCACLF_02492 2.1e-219 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
BOCCACLF_02493 1.6e-185 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BOCCACLF_02494 4.9e-161 cggR K Putative sugar-binding domain
BOCCACLF_02496 1.9e-93 S ECF transporter, substrate-specific component
BOCCACLF_02498 9.4e-82 liaI S membrane
BOCCACLF_02499 1.4e-43 XK27_02470 K LytTr DNA-binding domain
BOCCACLF_02500 2.3e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BOCCACLF_02501 2.9e-160 whiA K May be required for sporulation
BOCCACLF_02502 6.1e-180 ybhK S Required for morphogenesis under gluconeogenic growth conditions
BOCCACLF_02503 3.8e-154 rapZ S Displays ATPase and GTPase activities
BOCCACLF_02504 7.3e-199 cdr P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
BOCCACLF_02505 3.5e-81 S Short repeat of unknown function (DUF308)
BOCCACLF_02506 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
BOCCACLF_02507 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BOCCACLF_02508 8.7e-74 K acetyltransferase
BOCCACLF_02509 1.9e-107 yfbR S HD containing hydrolase-like enzyme
BOCCACLF_02510 5.8e-161 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BOCCACLF_02511 2e-158 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
BOCCACLF_02512 3.2e-173 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
BOCCACLF_02513 7.3e-134 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BOCCACLF_02514 3.9e-165 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BOCCACLF_02515 2e-48 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
BOCCACLF_02516 1.5e-42 pspC KT PspC domain protein
BOCCACLF_02517 4.3e-105 phoU P Plays a role in the regulation of phosphate uptake
BOCCACLF_02518 5.2e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BOCCACLF_02519 7.1e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BOCCACLF_02520 3.9e-151 pstA P Phosphate transport system permease protein PstA
BOCCACLF_02521 2.1e-150 pstC P probably responsible for the translocation of the substrate across the membrane
BOCCACLF_02522 8.8e-143 pstS P Phosphate
BOCCACLF_02523 1.1e-192 phoR 2.7.13.3 T Histidine kinase
BOCCACLF_02524 3.2e-119 K response regulator
BOCCACLF_02525 6.3e-165 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
BOCCACLF_02526 8.6e-171 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BOCCACLF_02527 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BOCCACLF_02528 4.6e-89 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BOCCACLF_02529 2.2e-77 comFC S Competence protein
BOCCACLF_02530 4.9e-174 comFA L Helicase C-terminal domain protein
BOCCACLF_02531 9.7e-94 yvyE 3.4.13.9 S YigZ family
BOCCACLF_02532 1.3e-101 K Psort location Cytoplasmic, score
BOCCACLF_02534 9.2e-52 S Acetyl xylan esterase (AXE1)
BOCCACLF_02535 4.9e-76 S Hydrolases of the alpha beta superfamily
BOCCACLF_02536 2.6e-176 tagO 2.7.8.33, 2.7.8.35 M transferase
BOCCACLF_02537 1.5e-50 lrgA S LrgA family
BOCCACLF_02538 1.2e-127 lrgB M LrgB-like family
BOCCACLF_02539 0.0 ydaO E amino acid
BOCCACLF_02540 2.7e-283 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BOCCACLF_02541 7.4e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BOCCACLF_02542 1.9e-79 ydcZ S Putative inner membrane exporter, YdcZ
BOCCACLF_02543 5.6e-71 tlpA2 L Transposase IS200 like
BOCCACLF_02545 2.5e-52 lmrB EGP Major facilitator Superfamily
BOCCACLF_02546 5e-46 merR K MerR HTH family regulatory protein
BOCCACLF_02547 4.8e-94 K Acetyltransferase (GNAT) domain
BOCCACLF_02548 9.7e-145 czcD P cation diffusion facilitator family transporter
BOCCACLF_02549 4.2e-72 sirR K iron dependent repressor
BOCCACLF_02550 8.4e-111 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BOCCACLF_02551 1.9e-307 uup S ABC transporter, ATP-binding protein
BOCCACLF_02552 5e-88 IQ reductase
BOCCACLF_02553 1.5e-186 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BOCCACLF_02554 1.3e-94 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
BOCCACLF_02555 4.6e-113 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
BOCCACLF_02556 1.4e-101 fat 3.1.2.21 I Acyl-ACP thioesterase
BOCCACLF_02557 3.1e-148 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BOCCACLF_02558 9.2e-32 yabA L Involved in initiation control of chromosome replication
BOCCACLF_02559 3.7e-153 holB 2.7.7.7 L DNA polymerase III
BOCCACLF_02560 3.9e-51 yaaQ S Cyclic-di-AMP receptor
BOCCACLF_02561 1.9e-102 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BOCCACLF_02562 1.3e-35 yaaL S Protein of unknown function (DUF2508)
BOCCACLF_02563 4.2e-104 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BOCCACLF_02564 2.9e-35 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BOCCACLF_02565 3.7e-270 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BOCCACLF_02566 9.9e-76 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BOCCACLF_02567 5.5e-104 rsmC 2.1.1.172 J Methyltransferase
BOCCACLF_02568 1.5e-33 nrdH O Glutaredoxin
BOCCACLF_02569 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BOCCACLF_02570 1.4e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BOCCACLF_02571 1.7e-96 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
BOCCACLF_02572 6.5e-94 yvdD 3.2.2.10 S Belongs to the LOG family
BOCCACLF_02573 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BOCCACLF_02574 3.3e-77 S NADPH-dependent FMN reductase
BOCCACLF_02575 1.2e-93 dedA S SNARE-like domain protein
BOCCACLF_02576 2.3e-199 S membrane
BOCCACLF_02577 9e-28 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatase
BOCCACLF_02578 1.3e-123 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
BOCCACLF_02579 4.2e-123 T PhoQ Sensor
BOCCACLF_02580 4.6e-94 K Transcriptional regulatory protein, C terminal
BOCCACLF_02581 1.9e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BOCCACLF_02582 4.1e-76 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BOCCACLF_02583 1e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BOCCACLF_02584 4.5e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BOCCACLF_02585 3.7e-99 nusG K Participates in transcription elongation, termination and antitermination
BOCCACLF_02586 2.4e-23 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
BOCCACLF_02587 7.9e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BOCCACLF_02588 1.6e-52 sigH K Sigma-70 region 2
BOCCACLF_02589 4.7e-89 yacP S YacP-like NYN domain
BOCCACLF_02590 7e-128 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BOCCACLF_02591 3.8e-64 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BOCCACLF_02592 4.1e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
BOCCACLF_02593 9.9e-280 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BOCCACLF_02595 1.2e-192 yacL S domain protein
BOCCACLF_02596 5.4e-240 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BOCCACLF_02597 1.2e-86 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
BOCCACLF_02598 6e-39
BOCCACLF_02599 6.2e-120 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BOCCACLF_02601 2.8e-148 1.1.1.2, 1.1.1.307 C Aldo keto reductase
BOCCACLF_02603 2.7e-252 pepC 3.4.22.40 E Peptidase C1-like family
BOCCACLF_02605 7.9e-105 V Beta-lactamase
BOCCACLF_02606 2.5e-164 V Beta-lactamase
BOCCACLF_02607 1.8e-85 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BOCCACLF_02608 1.6e-11 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BOCCACLF_02610 5.8e-146 EG EamA-like transporter family
BOCCACLF_02611 3.1e-154 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
BOCCACLF_02612 4.5e-184 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BOCCACLF_02613 3.1e-97 yliE T EAL domain
BOCCACLF_02614 8.4e-130 2.7.7.65 T diguanylate cyclase
BOCCACLF_02615 3.7e-127 manN G system, mannose fructose sorbose family IID component
BOCCACLF_02616 1.3e-100 manM G PTS system
BOCCACLF_02617 5.3e-60 pts10B 2.7.1.191, 2.7.1.202 G PTS system sorbose subfamily IIB component
BOCCACLF_02618 6e-57 manL 2.7.1.191 G PTS system fructose IIA component
BOCCACLF_02619 5.1e-89 gph 3.1.3.18 S HAD hydrolase, family IA, variant
BOCCACLF_02620 1.1e-222 dinF V MatE
BOCCACLF_02621 2.8e-44 S PFAM Uncharacterised protein family UPF0150
BOCCACLF_02623 6.7e-143 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BOCCACLF_02624 3.1e-73 ydcK S Belongs to the SprT family
BOCCACLF_02625 0.0 yhgF K Tex-like protein N-terminal domain protein
BOCCACLF_02626 2.1e-55
BOCCACLF_02627 4.4e-136 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BOCCACLF_02628 5.5e-275 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BOCCACLF_02629 4.6e-113 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
BOCCACLF_02630 3.7e-123 gntR1 K UbiC transcription regulator-associated domain protein
BOCCACLF_02631 1.7e-202 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
BOCCACLF_02632 1e-113 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BOCCACLF_02633 3.6e-290 yuxL 3.4.19.1 E Prolyl oligopeptidase family
BOCCACLF_02634 2.7e-16 M Leucine rich repeats (6 copies)
BOCCACLF_02635 1.1e-14 M Leucine rich repeats (6 copies)
BOCCACLF_02638 3.6e-114 yjjH S Calcineurin-like phosphoesterase
BOCCACLF_02639 3.6e-258 dtpT U amino acid peptide transporter
BOCCACLF_02640 1.1e-34 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
BOCCACLF_02643 6.5e-166 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BOCCACLF_02644 8.8e-151 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BOCCACLF_02645 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BOCCACLF_02646 5.1e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
BOCCACLF_02647 9.4e-168 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BOCCACLF_02648 1.8e-56 yabR J RNA binding
BOCCACLF_02649 4e-42 divIC D Septum formation initiator
BOCCACLF_02650 6.9e-38 yabO J S4 domain protein
BOCCACLF_02651 5.2e-247 yabM S Polysaccharide biosynthesis protein
BOCCACLF_02652 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BOCCACLF_02653 6.4e-91 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BOCCACLF_02654 5e-160 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
BOCCACLF_02657 2e-218 S Putative peptidoglycan binding domain
BOCCACLF_02659 2.4e-113 S (CBS) domain
BOCCACLF_02660 3.4e-59 ndoA L Toxic component of a toxin-antitoxin (TA) module
BOCCACLF_02662 3.1e-177 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BOCCACLF_02663 1.9e-51 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BOCCACLF_02664 8.9e-172 S nuclear-transcribed mRNA catabolic process, no-go decay
BOCCACLF_02665 2.4e-231 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BOCCACLF_02666 7.4e-221 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BOCCACLF_02667 1.7e-134
BOCCACLF_02668 4.3e-137 htpX O Belongs to the peptidase M48B family
BOCCACLF_02669 2.1e-84 lemA S LemA family
BOCCACLF_02670 2e-69 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BOCCACLF_02671 2e-108 XK27_00720 S Leucine-rich repeat (LRR) protein
BOCCACLF_02672 3.3e-111 XK27_00720 S regulation of response to stimulus
BOCCACLF_02673 9.6e-120 S Cell surface protein
BOCCACLF_02674 1.8e-32 S WxL domain surface cell wall-binding
BOCCACLF_02675 1.8e-26 S WxL domain surface cell wall-binding
BOCCACLF_02677 1.5e-06 S WxL domain surface cell wall-binding
BOCCACLF_02678 2.2e-218 L Transposase
BOCCACLF_02679 5.5e-103 srtA 3.4.22.70 M sortase family
BOCCACLF_02680 7.3e-42 rpmE2 J Ribosomal protein L31
BOCCACLF_02681 6.2e-222 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BOCCACLF_02682 9e-74 K transcriptional regulator
BOCCACLF_02683 0.0 macB_3 V ABC transporter, ATP-binding protein
BOCCACLF_02684 7.3e-167 XK27_00720 S Leucine-rich repeat (LRR) protein
BOCCACLF_02686 2.4e-292 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BOCCACLF_02687 8.3e-45 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BOCCACLF_02688 1.8e-72 ywiB S Domain of unknown function (DUF1934)
BOCCACLF_02689 9.6e-123 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
BOCCACLF_02690 6.1e-244 ywfO S HD domain protein
BOCCACLF_02691 2.3e-65 yxeH S hydrolase
BOCCACLF_02692 6.9e-24 yxeH S hydrolase
BOCCACLF_02693 2.1e-137 L Transposase DDE domain group 1
BOCCACLF_02694 9.5e-79 yxeH S hydrolase
BOCCACLF_02695 6.4e-35 racA K helix_turn_helix, mercury resistance
BOCCACLF_02696 8.7e-56 Q Methyltransferase domain
BOCCACLF_02698 1.9e-43 S Domain of unknown function (DUF3899)
BOCCACLF_02699 2.6e-172 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BOCCACLF_02700 3.2e-192 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BOCCACLF_02701 2e-136 purR 2.4.2.7 F pur operon repressor
BOCCACLF_02702 1.1e-120 znuB U ABC 3 transport family
BOCCACLF_02703 2.1e-110 fhuC P ABC transporter
BOCCACLF_02704 9.1e-127 znuA P Belongs to the bacterial solute-binding protein 9 family
BOCCACLF_02705 4.1e-106 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BOCCACLF_02706 1.5e-127 S Prolyl oligopeptidase family
BOCCACLF_02707 7.8e-102 2.7.1.2 GK ROK family
BOCCACLF_02708 2.3e-252 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BOCCACLF_02710 4.9e-162 xylR GK ROK family
BOCCACLF_02711 8.2e-244 xylP G MFS/sugar transport protein
BOCCACLF_02712 0.0 yicI 3.2.1.177 GH31 G Belongs to the glycosyl hydrolase 31 family
BOCCACLF_02713 1.2e-89 ung2 3.2.2.27 L Uracil-DNA glycosylase
BOCCACLF_02714 2.7e-11
BOCCACLF_02715 2.3e-25
BOCCACLF_02716 1.3e-27 E Zn peptidase
BOCCACLF_02717 1e-156 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BOCCACLF_02718 1.6e-35 veg S Biofilm formation stimulator VEG
BOCCACLF_02719 1e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BOCCACLF_02720 1e-91 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BOCCACLF_02721 3.6e-140 tatD L hydrolase, TatD family
BOCCACLF_02722 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BOCCACLF_02723 4.6e-133 yunF F Protein of unknown function DUF72
BOCCACLF_02724 2.5e-42
BOCCACLF_02725 1.1e-116 cobB K SIR2 family
BOCCACLF_02726 3.2e-154
BOCCACLF_02727 8.3e-179 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
BOCCACLF_02728 3.8e-165 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
BOCCACLF_02729 3.6e-180 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
BOCCACLF_02730 8.7e-96 1.1.1.1 P alcohol dehydrogenase
BOCCACLF_02734 0.0 helD 3.6.4.12 L DNA helicase
BOCCACLF_02736 1.6e-48 S Phage Mu protein F like protein
BOCCACLF_02738 8e-63
BOCCACLF_02740 2.1e-176 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
BOCCACLF_02741 3.9e-203 gshR 1.8.1.7 C Glutathione reductase
BOCCACLF_02742 1.3e-131 EGP Major facilitator Superfamily
BOCCACLF_02743 1.2e-58 S Protein of unknown function (DUF3290)
BOCCACLF_02744 3.5e-101 yviA S Protein of unknown function (DUF421)
BOCCACLF_02745 6.8e-66 I NUDIX domain
BOCCACLF_02747 3.3e-16 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
BOCCACLF_02748 2.2e-106 S Peptidase_C39 like family
BOCCACLF_02749 2.1e-123 M Peptidase_C39 like family
BOCCACLF_02751 7.1e-140 lmrP E Major Facilitator Superfamily
BOCCACLF_02752 2.2e-282 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
BOCCACLF_02753 9.2e-241 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BOCCACLF_02754 9.1e-109
BOCCACLF_02755 1.8e-126 K Helix-turn-helix domain, rpiR family
BOCCACLF_02756 3.2e-182 aguA 3.5.3.12 E agmatine deiminase
BOCCACLF_02757 7.2e-151 arcC 2.7.2.2 E Belongs to the carbamate kinase family
BOCCACLF_02758 2.8e-207 aguA 3.5.3.12 E agmatine deiminase
BOCCACLF_02759 3.4e-205 aguD E Amino Acid
BOCCACLF_02760 4.9e-185 ptcA 2.1.3.3, 2.1.3.6 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BOCCACLF_02761 1.2e-105
BOCCACLF_02762 7.7e-248 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BOCCACLF_02763 1.3e-260 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
BOCCACLF_02764 4.2e-254 E amino acid
BOCCACLF_02765 3.9e-70 dhaS K Bacterial regulatory proteins, tetR family
BOCCACLF_02766 6e-52 K Acetyltransferase (GNAT) domain
BOCCACLF_02770 1.2e-61 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H Phosphomethylpyrimidine kinase
BOCCACLF_02771 3e-55 hmpT S ECF-type riboflavin transporter, S component
BOCCACLF_02772 5.9e-76 ywlG S Belongs to the UPF0340 family
BOCCACLF_02773 1.1e-161 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
BOCCACLF_02774 1.4e-16
BOCCACLF_02775 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
BOCCACLF_02776 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
BOCCACLF_02777 1.9e-182 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
BOCCACLF_02778 4e-139 xynD 3.5.1.104 G polysaccharide deacetylase
BOCCACLF_02779 7.5e-46
BOCCACLF_02780 5.2e-78 GM NAD(P)H-binding
BOCCACLF_02781 7.4e-167 iolS C Aldo keto reductase
BOCCACLF_02782 1.4e-216 pbuG S permease
BOCCACLF_02783 1.3e-37
BOCCACLF_02784 1e-57 fadR K Bacterial regulatory proteins, tetR family
BOCCACLF_02785 2.4e-108 GM NmrA-like family
BOCCACLF_02789 3.4e-137 2.5.1.74 H UbiA prenyltransferase family
BOCCACLF_02790 0.0 S Bacterial membrane protein YfhO
BOCCACLF_02791 2e-78 ccl S QueT transporter
BOCCACLF_02792 8.5e-268 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BOCCACLF_02793 1.4e-14
BOCCACLF_02794 9.7e-128 F DNA/RNA non-specific endonuclease
BOCCACLF_02795 9.4e-71
BOCCACLF_02797 9.7e-23
BOCCACLF_02798 4.7e-85 L haloacid dehalogenase-like hydrolase
BOCCACLF_02799 6.4e-214 pepC 3.4.22.40 E aminopeptidase
BOCCACLF_02800 1.9e-70 K Transcriptional regulator
BOCCACLF_02801 7.9e-155 V ABC transporter
BOCCACLF_02802 1.7e-115 V AAA domain, putative AbiEii toxin, Type IV TA system
BOCCACLF_02804 3.4e-69 K helix_turn_helix multiple antibiotic resistance protein
BOCCACLF_02805 4.6e-95 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BOCCACLF_02806 4e-183 tcaB EGP Major facilitator Superfamily
BOCCACLF_02807 1.6e-187 S module of peptide synthetase
BOCCACLF_02808 5.2e-74 ykhA 3.1.2.20 I Thioesterase superfamily
BOCCACLF_02809 1.4e-129
BOCCACLF_02810 2.6e-84 J Acetyltransferase (GNAT) domain
BOCCACLF_02811 5e-87 ywnB S NAD(P)H-binding
BOCCACLF_02812 1.5e-156 L Transposase, IS116 IS110 IS902 family
BOCCACLF_02813 1e-195 brnQ U Component of the transport system for branched-chain amino acids
BOCCACLF_02814 5.5e-24
BOCCACLF_02815 1.9e-81 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S HAD-hyrolase-like
BOCCACLF_02816 5.6e-18
BOCCACLF_02817 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BOCCACLF_02818 1.2e-239 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BOCCACLF_02819 3.9e-86 jag S R3H domain protein
BOCCACLF_02820 2.1e-138 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BOCCACLF_02821 7.3e-56 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BOCCACLF_02822 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
BOCCACLF_02826 1.8e-99 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
BOCCACLF_02827 7.6e-194 O Heat shock 70 kDa protein
BOCCACLF_02828 7.2e-43
BOCCACLF_02829 1.9e-131 repA S Replication initiator protein A
BOCCACLF_02830 7.4e-43 relB L Addiction module antitoxin, RelB DinJ family
BOCCACLF_02831 2.3e-27
BOCCACLF_02832 2e-40
BOCCACLF_02833 2.5e-27
BOCCACLF_02834 0.0 L MobA MobL family protein
BOCCACLF_02835 3.4e-14
BOCCACLF_02836 2.7e-82
BOCCACLF_02837 1.5e-50 S Cag pathogenicity island, type IV secretory system
BOCCACLF_02838 7.5e-48
BOCCACLF_02839 2.4e-116
BOCCACLF_02840 0.0 U AAA-like domain
BOCCACLF_02841 1.5e-213 polC 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 S WXG100 protein secretion system (Wss), protein YukC
BOCCACLF_02842 2.9e-162 M CHAP domain
BOCCACLF_02843 1.1e-54
BOCCACLF_02844 9.8e-43 CO COG0526, thiol-disulfide isomerase and thioredoxins
BOCCACLF_02845 5.3e-67
BOCCACLF_02846 3.5e-224 traK U TraM recognition site of TraD and TraG
BOCCACLF_02848 5.4e-76
BOCCACLF_02849 0.0 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
BOCCACLF_02850 3.7e-18
BOCCACLF_02851 2.8e-186 L Psort location Cytoplasmic, score
BOCCACLF_02852 8.4e-55 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
BOCCACLF_02853 7.1e-238 bcgIA 2.1.1.72 V Type I restriction-modification system methyltransferase subunit()
BOCCACLF_02854 1e-53 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
BOCCACLF_02855 2.3e-63
BOCCACLF_02856 3.6e-54
BOCCACLF_02857 4.2e-250 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
BOCCACLF_02859 1.3e-28 4.6.1.1 T Pfam Adenylate and Guanylate cyclase catalytic domain
BOCCACLF_02860 1.3e-28 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
BOCCACLF_02861 1.4e-207 L Transposase
BOCCACLF_02862 3.9e-74 M domain protein
BOCCACLF_02863 1.6e-12
BOCCACLF_02864 2.4e-41
BOCCACLF_02865 2.5e-109 L Psort location Cytoplasmic, score
BOCCACLF_02872 5.6e-34 S Protein of unknown function (DUF3102)
BOCCACLF_02873 3.2e-108 K Primase C terminal 1 (PriCT-1)
BOCCACLF_02874 2.4e-135 D Cellulose biosynthesis protein BcsQ
BOCCACLF_02875 2.6e-08
BOCCACLF_02876 3.3e-58 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
BOCCACLF_02877 1.2e-186 V ABC transporter
BOCCACLF_02878 8.6e-84 V ABC transporter
BOCCACLF_02879 1.4e-175 L Transposase and inactivated derivatives, IS30 family
BOCCACLF_02880 4.5e-174 L Integrase core domain
BOCCACLF_02881 2.7e-146 D CobQ CobB MinD ParA nucleotide binding domain protein
BOCCACLF_02882 2.6e-95 tnpR1 L Resolvase, N terminal domain
BOCCACLF_02883 2.1e-111 2.4.1.83 GT2 M GtrA-like protein
BOCCACLF_02884 9.7e-259 bcsA 2.4.1.12 GT2 M PilZ domain
BOCCACLF_02885 1.3e-196
BOCCACLF_02888 2.5e-10
BOCCACLF_02889 1.7e-111 L MobA MobL family protein
BOCCACLF_02890 2.5e-27
BOCCACLF_02891 8.9e-41
BOCCACLF_02892 5.5e-123 S Fic/DOC family
BOCCACLF_02893 1.9e-46 repA S Replication initiator protein A
BOCCACLF_02894 6.1e-143 soj D CobQ CobB MinD ParA nucleotide binding domain protein
BOCCACLF_02895 1.2e-23 S Family of unknown function (DUF5388)
BOCCACLF_02896 1.2e-151 kup P Transport of potassium into the cell
BOCCACLF_02897 3e-120 L Transposase
BOCCACLF_02898 1e-08 L Transposase
BOCCACLF_02899 5.8e-56 kup P Transport of potassium into the cell
BOCCACLF_02900 3.8e-173 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
BOCCACLF_02901 1.9e-07 asnB 6.3.5.4 E Protein of unknown function (DUF3923)
BOCCACLF_02902 3.7e-301 ybeC E amino acid
BOCCACLF_02903 1.1e-192 L Transposase and inactivated derivatives, IS30 family
BOCCACLF_02904 2.9e-102 tnpR L Resolvase, N terminal domain
BOCCACLF_02905 3.6e-40
BOCCACLF_02906 0.0 V Type II restriction enzyme, methylase subunits
BOCCACLF_02907 6.8e-41 K Helix-turn-helix domain
BOCCACLF_02908 2.8e-63 S Phage derived protein Gp49-like (DUF891)
BOCCACLF_02909 1.5e-09
BOCCACLF_02910 1.1e-80 K Putative DNA-binding domain
BOCCACLF_02911 3.4e-62 hsdS_1 3.1.21.3 V Type I Restriction
BOCCACLF_02912 1.2e-07
BOCCACLF_02913 1.4e-153 L Psort location Cytoplasmic, score
BOCCACLF_02914 2e-32
BOCCACLF_02915 3.2e-66 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
BOCCACLF_02916 2.9e-194 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
BOCCACLF_02917 1.1e-248 L MobA MobL family protein
BOCCACLF_02920 8.5e-08
BOCCACLF_02922 1.2e-32 VP1577 S COG0433 Predicted ATPase
BOCCACLF_02924 8.1e-34
BOCCACLF_02930 7.6e-31 VP1566
BOCCACLF_02937 1.5e-59 L DNA (cytosine-5-)-methyltransferase activity
BOCCACLF_02938 6.8e-115 S Bacteriophage replication gene A protein (GPA)

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)