ORF_ID e_value Gene_name EC_number CAZy COGs Description
JPDEFOMO_00003 2.6e-139 S CAAX protease self-immunity
JPDEFOMO_00007 8.6e-112 usp 3.5.1.28 CBM50 D CHAP domain
JPDEFOMO_00008 0.0 ylbB V ABC transporter permease
JPDEFOMO_00009 2.8e-128 macB V ABC transporter, ATP-binding protein
JPDEFOMO_00010 7.5e-100 K transcriptional regulator
JPDEFOMO_00011 3.2e-152 supH G Sucrose-6F-phosphate phosphohydrolase
JPDEFOMO_00012 2.1e-49
JPDEFOMO_00015 8.1e-210 ybfG M peptidoglycan-binding domain-containing protein
JPDEFOMO_00016 5.3e-139 ybfG M peptidoglycan-binding domain-containing protein
JPDEFOMO_00017 3.1e-148 S membrane transporter protein
JPDEFOMO_00018 1.8e-102 S Protein of unknown function (DUF1211)
JPDEFOMO_00019 9.1e-164 corA P CorA-like Mg2+ transporter protein
JPDEFOMO_00020 2.4e-113 K Bacterial regulatory proteins, tetR family
JPDEFOMO_00022 3.4e-242 mntH P H( )-stimulated, divalent metal cation uptake system
JPDEFOMO_00024 1.9e-288 pipD E Dipeptidase
JPDEFOMO_00025 1.9e-107 S Membrane
JPDEFOMO_00026 3.6e-51
JPDEFOMO_00028 1.2e-103
JPDEFOMO_00029 8.3e-76
JPDEFOMO_00030 3.2e-53
JPDEFOMO_00031 6.2e-123 azlC E branched-chain amino acid
JPDEFOMO_00032 1.5e-50 azlD S Branched-chain amino acid transport protein (AzlD)
JPDEFOMO_00034 2.7e-29
JPDEFOMO_00035 2.9e-145 S CAAX protease self-immunity
JPDEFOMO_00036 3.4e-115 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
JPDEFOMO_00037 1.5e-126 kdgR K FCD domain
JPDEFOMO_00038 8.6e-56
JPDEFOMO_00039 1.9e-164 K Transcriptional activator, Rgg GadR MutR family
JPDEFOMO_00040 2.3e-290 V ABC-type multidrug transport system, ATPase and permease components
JPDEFOMO_00041 8e-244 EGP Major facilitator Superfamily
JPDEFOMO_00042 8.8e-13 K TRANSCRIPTIONal
JPDEFOMO_00043 0.0 ydgH S MMPL family
JPDEFOMO_00044 7.4e-109 K Tetracycline repressor, C-terminal all-alpha domain
JPDEFOMO_00046 3.3e-110 opuCD P Binding-protein-dependent transport system inner membrane component
JPDEFOMO_00047 3.3e-172 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
JPDEFOMO_00048 1e-105 opuCB E ABC transporter permease
JPDEFOMO_00049 1e-216 opuCA 2.7.7.7 E ABC transporter, ATP-binding protein
JPDEFOMO_00050 5.2e-23 ypbD S CAAX protease self-immunity
JPDEFOMO_00052 0.0 3.6.3.3, 3.6.3.5 P P-type ATPase
JPDEFOMO_00053 2.5e-33 copZ P Heavy-metal-associated domain
JPDEFOMO_00054 5e-102 dps P Belongs to the Dps family
JPDEFOMO_00055 3.6e-117 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
JPDEFOMO_00056 6.7e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
JPDEFOMO_00057 1.5e-230 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
JPDEFOMO_00058 1.9e-104 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
JPDEFOMO_00059 1.8e-139 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
JPDEFOMO_00060 5.4e-184 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JPDEFOMO_00061 2.3e-232 S PTS system sugar-specific permease component
JPDEFOMO_00062 2.8e-45 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_00063 1e-78 ptsN 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_00064 4e-138 S Domain of unknown function (DUF4918)
JPDEFOMO_00065 8.8e-15
JPDEFOMO_00066 6.2e-185
JPDEFOMO_00067 8e-308 norB EGP Major Facilitator
JPDEFOMO_00068 1.8e-107 K Bacterial regulatory proteins, tetR family
JPDEFOMO_00070 1.3e-128
JPDEFOMO_00071 2.1e-227 S ABC-type transport system involved in multi-copper enzyme maturation permease component
JPDEFOMO_00072 2.6e-166
JPDEFOMO_00073 1.1e-121 V ATPases associated with a variety of cellular activities
JPDEFOMO_00074 8.9e-65 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
JPDEFOMO_00075 1.7e-17
JPDEFOMO_00076 4e-46 M Peptidoglycan-binding domain 1 protein
JPDEFOMO_00077 7.2e-264 ybfG M peptidoglycan-binding domain-containing protein
JPDEFOMO_00078 2.3e-41 ybfG M peptidoglycan-binding domain-containing protein
JPDEFOMO_00080 4.6e-140 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
JPDEFOMO_00081 1.8e-167 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JPDEFOMO_00082 2.8e-221 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
JPDEFOMO_00083 2.1e-70 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
JPDEFOMO_00084 1.6e-257 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
JPDEFOMO_00085 4.7e-260 lysC 2.7.2.4 E Belongs to the aspartokinase family
JPDEFOMO_00086 7.1e-189 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JPDEFOMO_00087 2.6e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JPDEFOMO_00088 2.3e-63
JPDEFOMO_00089 4.5e-73 3.6.1.55 L NUDIX domain
JPDEFOMO_00090 3.3e-150 EG EamA-like transporter family
JPDEFOMO_00091 3.1e-96 S Phospholipase A2
JPDEFOMO_00093 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
JPDEFOMO_00094 9e-75 rplI J Binds to the 23S rRNA
JPDEFOMO_00095 4.6e-247 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
JPDEFOMO_00096 5.8e-219
JPDEFOMO_00098 1.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JPDEFOMO_00099 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
JPDEFOMO_00100 1.1e-56 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
JPDEFOMO_00101 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
JPDEFOMO_00102 5.5e-161 lysR5 K LysR substrate binding domain
JPDEFOMO_00103 4.6e-205 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_00104 4.8e-34 S Phospholipase_D-nuclease N-terminal
JPDEFOMO_00105 6.4e-168 yxlF V ABC transporter
JPDEFOMO_00106 2.1e-132 S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
JPDEFOMO_00107 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
JPDEFOMO_00108 3e-130
JPDEFOMO_00109 1.2e-103 K Bacteriophage CI repressor helix-turn-helix domain
JPDEFOMO_00110 4.9e-262
JPDEFOMO_00111 1.1e-73 T Calcineurin-like phosphoesterase superfamily domain
JPDEFOMO_00112 7.5e-269 L Transposase DDE domain
JPDEFOMO_00113 1.7e-37 T Calcineurin-like phosphoesterase superfamily domain
JPDEFOMO_00114 2.3e-259 C COG0277 FAD FMN-containing dehydrogenases
JPDEFOMO_00116 2.2e-39
JPDEFOMO_00117 1.7e-42 S Protein of unknown function (DUF2089)
JPDEFOMO_00118 1.9e-183 I PAP2 superfamily
JPDEFOMO_00119 4.6e-210 mccF V LD-carboxypeptidase
JPDEFOMO_00120 1.5e-42
JPDEFOMO_00121 4e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JPDEFOMO_00122 1.4e-89 ogt 2.1.1.63 L Methyltransferase
JPDEFOMO_00123 2.8e-193 ldhD3 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JPDEFOMO_00124 2.4e-44
JPDEFOMO_00125 7.4e-86 slyA K Transcriptional regulator
JPDEFOMO_00126 3e-187 1.6.5.5 C alcohol dehydrogenase
JPDEFOMO_00127 4.8e-55 ypaA S Protein of unknown function (DUF1304)
JPDEFOMO_00128 1.4e-54 S Protein of unknown function (DUF1516)
JPDEFOMO_00129 9.1e-254 pbuO S permease
JPDEFOMO_00130 6.3e-46 S DsrE/DsrF-like family
JPDEFOMO_00131 1.7e-179 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JPDEFOMO_00132 4.9e-29
JPDEFOMO_00133 6.2e-105 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JPDEFOMO_00134 0.0
JPDEFOMO_00136 1.1e-120 S WxL domain surface cell wall-binding
JPDEFOMO_00137 1.3e-123 S WxL domain surface cell wall-binding
JPDEFOMO_00138 2.3e-185 ynjC S Cell surface protein
JPDEFOMO_00140 7.7e-269 L Mga helix-turn-helix domain
JPDEFOMO_00141 6.3e-182 yhaI S Protein of unknown function (DUF805)
JPDEFOMO_00142 1.2e-57
JPDEFOMO_00143 8.4e-254 rarA L recombination factor protein RarA
JPDEFOMO_00144 6.8e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JPDEFOMO_00145 5.1e-161 pphA 3.1.3.16 T Calcineurin-like phosphoesterase superfamily domain
JPDEFOMO_00146 1.5e-140 magIII L Base excision DNA repair protein, HhH-GPD family
JPDEFOMO_00147 4e-47 S Thiamine-binding protein
JPDEFOMO_00148 3.2e-247 yhgE V domain protein
JPDEFOMO_00149 2e-100 yobS K Bacterial regulatory proteins, tetR family
JPDEFOMO_00150 1.1e-254 bmr3 EGP Major facilitator Superfamily
JPDEFOMO_00152 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
JPDEFOMO_00153 4.7e-299 oppA E ABC transporter, substratebinding protein
JPDEFOMO_00154 1.5e-19
JPDEFOMO_00155 6.6e-15
JPDEFOMO_00156 1.9e-80 S NUDIX domain
JPDEFOMO_00157 1.4e-214 S nuclear-transcribed mRNA catabolic process, no-go decay
JPDEFOMO_00158 0.0 fnq20 1.13.12.16 S FAD-NAD(P)-binding
JPDEFOMO_00159 3.8e-262 nox 1.6.3.4 C NADH oxidase
JPDEFOMO_00160 1.7e-116
JPDEFOMO_00161 3.8e-219 S TPM domain
JPDEFOMO_00162 4.6e-125 yxaA S Sulfite exporter TauE/SafE
JPDEFOMO_00163 1e-55 ywjH S Protein of unknown function (DUF1634)
JPDEFOMO_00165 6.5e-90
JPDEFOMO_00166 2.8e-48
JPDEFOMO_00167 7.1e-83 fld C Flavodoxin
JPDEFOMO_00168 1.2e-36
JPDEFOMO_00169 1.1e-26
JPDEFOMO_00170 1.9e-170 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JPDEFOMO_00171 1.4e-71 pdxH S Pyridoxamine 5'-phosphate oxidase
JPDEFOMO_00172 9.9e-39 S Transglycosylase associated protein
JPDEFOMO_00173 1.8e-82 S Protein conserved in bacteria
JPDEFOMO_00174 2.8e-25
JPDEFOMO_00175 7.4e-68 asp23 S Asp23 family, cell envelope-related function
JPDEFOMO_00176 1.6e-62 asp2 S Asp23 family, cell envelope-related function
JPDEFOMO_00177 3.9e-114 S Protein of unknown function (DUF969)
JPDEFOMO_00178 2.2e-152 S Protein of unknown function (DUF979)
JPDEFOMO_00179 5e-119 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JPDEFOMO_00180 4.9e-108 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
JPDEFOMO_00181 1e-127 cobQ S glutamine amidotransferase
JPDEFOMO_00182 1.3e-66
JPDEFOMO_00183 1.7e-131 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
JPDEFOMO_00184 1.5e-144 noc K Belongs to the ParB family
JPDEFOMO_00185 9.7e-138 soj D Sporulation initiation inhibitor
JPDEFOMO_00186 5.2e-156 spo0J K Belongs to the ParB family
JPDEFOMO_00187 1.8e-29 yyzM S Bacterial protein of unknown function (DUF951)
JPDEFOMO_00188 1.3e-185 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JPDEFOMO_00189 3.1e-110 XK27_01040 S Protein of unknown function (DUF1129)
JPDEFOMO_00190 2.5e-275 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JPDEFOMO_00191 1.9e-121
JPDEFOMO_00192 5.6e-121 K response regulator
JPDEFOMO_00193 3.9e-218 hpk31 2.7.13.3 T Histidine kinase
JPDEFOMO_00194 4.8e-238 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JPDEFOMO_00195 1.6e-79 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JPDEFOMO_00196 2.3e-295 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JPDEFOMO_00197 1.8e-141 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
JPDEFOMO_00198 7.2e-166 yvgN C Aldo keto reductase
JPDEFOMO_00199 1.9e-144 iolR K COG1349 Transcriptional regulators of sugar metabolism
JPDEFOMO_00200 5.6e-267 iolT EGP Major facilitator Superfamily
JPDEFOMO_00201 4e-32 iolA 1.2.1.18, 1.2.1.27 C Belongs to the aldehyde dehydrogenase family
JPDEFOMO_00202 2.3e-240 iolA 1.2.1.18, 1.2.1.27 C Belongs to the aldehyde dehydrogenase family
JPDEFOMO_00203 7.1e-155 iolB 5.3.1.30 G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
JPDEFOMO_00204 1.7e-179 iolC 2.7.1.92 H Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
JPDEFOMO_00205 3.6e-160 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
JPDEFOMO_00206 3.8e-190 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
JPDEFOMO_00207 6.4e-193 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
JPDEFOMO_00208 3.4e-194 iolG2 1.1.1.18, 1.1.1.369 S Oxidoreductase family, C-terminal alpha/beta domain
JPDEFOMO_00209 1.2e-174 iolE 4.2.1.44 G Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
JPDEFOMO_00210 2.3e-94 iolJ 4.1.2.13, 4.1.2.29 G Fructose-bisphosphate aldolase class-II
JPDEFOMO_00211 1e-66 iolK S Tautomerase enzyme
JPDEFOMO_00212 1.5e-123 gntR K rpiR family
JPDEFOMO_00213 2.5e-169 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
JPDEFOMO_00214 3.8e-306 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
JPDEFOMO_00215 8.8e-211 gntP EG Gluconate
JPDEFOMO_00216 2e-250 S O-antigen ligase like membrane protein
JPDEFOMO_00217 1.2e-151 S Glycosyl transferase family 2
JPDEFOMO_00218 2.5e-116 welB S Glycosyltransferase like family 2
JPDEFOMO_00219 1.1e-161 S Glycosyltransferase like family 2
JPDEFOMO_00220 1.6e-148 M Glycosyltransferase sugar-binding region containing DXD motif
JPDEFOMO_00221 0.0 M Glycosyl hydrolases family 25
JPDEFOMO_00222 7.4e-55 M Glycosyl hydrolases family 25
JPDEFOMO_00223 5.4e-259 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
JPDEFOMO_00224 3.7e-162 S Glycosyltransferase like family 2
JPDEFOMO_00225 3e-198 S Protein conserved in bacteria
JPDEFOMO_00226 7.6e-58
JPDEFOMO_00227 1.5e-129 fhuC 3.6.3.35 P ABC transporter
JPDEFOMO_00228 4e-134 znuB U ABC 3 transport family
JPDEFOMO_00229 8.4e-167 T Calcineurin-like phosphoesterase superfamily domain
JPDEFOMO_00230 1.7e-162 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
JPDEFOMO_00231 0.0 pepF E oligoendopeptidase F
JPDEFOMO_00232 7.4e-200 brpA K Cell envelope-like function transcriptional attenuator common domain protein
JPDEFOMO_00233 2.9e-249 brnQ U Component of the transport system for branched-chain amino acids
JPDEFOMO_00234 4.5e-70 T Sh3 type 3 domain protein
JPDEFOMO_00235 1.1e-133 glcR K DeoR C terminal sensor domain
JPDEFOMO_00236 2e-146 M Glycosyltransferase like family 2
JPDEFOMO_00237 6.1e-137 XK27_06755 S Protein of unknown function (DUF975)
JPDEFOMO_00238 6.2e-41
JPDEFOMO_00239 1.1e-107 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JPDEFOMO_00240 2.6e-177 draG O ADP-ribosylglycohydrolase
JPDEFOMO_00241 4.3e-294 S ABC transporter
JPDEFOMO_00242 6.7e-136 Q Methyltransferase domain
JPDEFOMO_00243 1.4e-53 trxC O Belongs to the thioredoxin family
JPDEFOMO_00244 6.3e-137 thrE S Putative threonine/serine exporter
JPDEFOMO_00245 1.4e-75 S Threonine/Serine exporter, ThrE
JPDEFOMO_00246 1.9e-209 livJ E Receptor family ligand binding region
JPDEFOMO_00247 4.3e-150 livH U Branched-chain amino acid transport system / permease component
JPDEFOMO_00248 2.7e-121 livM E Branched-chain amino acid transport system / permease component
JPDEFOMO_00249 2.8e-140 livG E Branched-chain amino acid ATP-binding cassette transporter
JPDEFOMO_00250 5.1e-125 livF E ABC transporter
JPDEFOMO_00251 3.1e-167 S Alpha/beta hydrolase of unknown function (DUF915)
JPDEFOMO_00252 2.7e-236 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JPDEFOMO_00253 7.6e-118 XK27_12570 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
JPDEFOMO_00254 2.8e-117 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JPDEFOMO_00255 6.8e-231 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
JPDEFOMO_00256 3.4e-129 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
JPDEFOMO_00257 1.3e-154 M NlpC P60 family protein
JPDEFOMO_00261 2.9e-262 nox 1.6.3.4 C NADH oxidase
JPDEFOMO_00262 2.6e-160 sepS16B
JPDEFOMO_00263 6.6e-122
JPDEFOMO_00264 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
JPDEFOMO_00265 4.6e-241 G Bacterial extracellular solute-binding protein
JPDEFOMO_00266 1.8e-87
JPDEFOMO_00267 0.0 strH 3.2.1.52 GH20 G Gram-positive signal peptide protein, YSIRK family
JPDEFOMO_00268 1.1e-194 manA 5.3.1.8 G mannose-6-phosphate isomerase
JPDEFOMO_00269 1.2e-129 XK27_08435 K UTRA
JPDEFOMO_00270 1.6e-219 agaS G SIS domain
JPDEFOMO_00271 9.9e-227 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
JPDEFOMO_00272 0.0 bgaC 3.2.1.23 G Glycosyl hydrolases family 35
JPDEFOMO_00273 3.6e-82 manX_1 2.7.1.191 G PTS system sorbose subfamily IIB component
JPDEFOMO_00274 4.4e-161 XK27_08455 G PTS system sorbose-specific iic component
JPDEFOMO_00275 7.9e-146 manZ_1 G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_00276 9.2e-65 XK27_08465 2.7.1.191 G PTS system fructose IIA component
JPDEFOMO_00277 8.4e-224 S Uncharacterized protein conserved in bacteria (DUF2325)
JPDEFOMO_00278 2.8e-192 4.4.1.8 E Aminotransferase, class I
JPDEFOMO_00279 8.1e-199 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
JPDEFOMO_00280 3.5e-252 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JPDEFOMO_00281 2.3e-59 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_00282 3e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
JPDEFOMO_00283 1.9e-127 ypdE E M42 glutamyl aminopeptidase
JPDEFOMO_00284 6.9e-51 ypdE E M42 glutamyl aminopeptidase
JPDEFOMO_00285 0.0 licR 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_00286 3.3e-244 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
JPDEFOMO_00287 4.9e-296 E ABC transporter, substratebinding protein
JPDEFOMO_00288 4.8e-122 S Acetyltransferase (GNAT) family
JPDEFOMO_00290 9.8e-95 S ABC-type cobalt transport system, permease component
JPDEFOMO_00291 2.9e-246 P ABC transporter
JPDEFOMO_00292 1.4e-110 P cobalt transport
JPDEFOMO_00293 8.7e-130 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JPDEFOMO_00294 2e-83 thiW S Thiamine-precursor transporter protein (ThiW)
JPDEFOMO_00295 4.2e-150 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JPDEFOMO_00296 2.7e-109 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
JPDEFOMO_00297 2.4e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
JPDEFOMO_00298 5.6e-272 E Amino acid permease
JPDEFOMO_00299 2.3e-32
JPDEFOMO_00300 3.5e-188 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
JPDEFOMO_00301 3.3e-65 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
JPDEFOMO_00302 2e-283 rbsA 3.6.3.17 G ABC transporter
JPDEFOMO_00303 3.6e-145 rbsC U Belongs to the binding-protein-dependent transport system permease family
JPDEFOMO_00304 2.5e-167 rbsB G Periplasmic binding protein domain
JPDEFOMO_00305 1.4e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JPDEFOMO_00306 4.4e-42 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
JPDEFOMO_00307 0.0 pbpC M NTF2-like N-terminal transpeptidase domain
JPDEFOMO_00308 2.8e-244 ydiC1 EGP Major facilitator Superfamily
JPDEFOMO_00309 4.7e-73 K helix_turn_helix multiple antibiotic resistance protein
JPDEFOMO_00310 5.6e-103
JPDEFOMO_00311 2.6e-24
JPDEFOMO_00312 2e-60
JPDEFOMO_00313 1.8e-68 S Protein of unknown function (DUF1093)
JPDEFOMO_00314 2.6e-94
JPDEFOMO_00315 1.3e-87 V AAA domain, putative AbiEii toxin, Type IV TA system
JPDEFOMO_00316 2.3e-125
JPDEFOMO_00317 4.7e-112
JPDEFOMO_00318 2.2e-265 L Transposase DDE domain
JPDEFOMO_00319 2.2e-55
JPDEFOMO_00320 1.2e-269 frdC 1.3.5.4 C HI0933-like protein
JPDEFOMO_00321 9.9e-208 GKT transcriptional antiterminator
JPDEFOMO_00322 2.6e-175 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GKT transcriptional antiterminator
JPDEFOMO_00323 3.1e-50 ptxB 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_00324 1.3e-208 ulaA 2.7.1.194 S PTS system sugar-specific permease component
JPDEFOMO_00325 5.6e-71
JPDEFOMO_00326 2.2e-162 4.1.2.13 G Fructose-bisphosphate aldolase class-II
JPDEFOMO_00327 2.7e-117 6.3.4.4 S Zeta toxin
JPDEFOMO_00328 1.2e-157 K Sugar-specific transcriptional regulator TrmB
JPDEFOMO_00329 3.4e-147 S Sulfite exporter TauE/SafE
JPDEFOMO_00330 2.9e-179 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
JPDEFOMO_00331 5e-150 3.1.1.24 S Alpha/beta hydrolase family
JPDEFOMO_00335 1.8e-100 M Bacterial Ig-like domain (group 3)
JPDEFOMO_00337 2.6e-114 L Transposase and inactivated derivatives, IS30 family
JPDEFOMO_00338 1.7e-69 pdxH S Pyridoxamine 5'-phosphate oxidase
JPDEFOMO_00339 1.1e-70 yqeB S Pyrimidine dimer DNA glycosylase
JPDEFOMO_00340 4.1e-151 3.5.2.6 V Beta-lactamase
JPDEFOMO_00341 4.8e-83
JPDEFOMO_00342 1.3e-179 K Transcriptional regulator
JPDEFOMO_00343 1.6e-130 G PTS system sorbose-specific iic component
JPDEFOMO_00344 1.1e-129 G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_00345 3.9e-228 P Type I phosphodiesterase / nucleotide pyrophosphatase
JPDEFOMO_00346 1.7e-164 pkn1 1.8.3.7 S Sulfatase-modifying factor enzyme 1
JPDEFOMO_00347 1.8e-131 S Sulfite exporter TauE/SafE
JPDEFOMO_00348 5.8e-200 C Iron-sulfur cluster-binding domain
JPDEFOMO_00349 8.6e-173 rihB 3.2.2.1 F Nucleoside
JPDEFOMO_00350 6.3e-236 dcuD C Tripartite ATP-independent periplasmic transporter, DctM component
JPDEFOMO_00351 9.2e-89 K Acetyltransferase (GNAT) family
JPDEFOMO_00352 2.5e-135 K helix_turn_helix gluconate operon transcriptional repressor
JPDEFOMO_00353 9.3e-160 estA CE1 S Putative esterase
JPDEFOMO_00354 4.4e-152 G system, mannose fructose sorbose family IID component
JPDEFOMO_00355 5.9e-135 G PTS system sorbose-specific iic component
JPDEFOMO_00356 1.9e-89 2.7.1.191, 2.7.1.203 G PTS system sorbose subfamily IIB component
JPDEFOMO_00357 1.9e-68 2.7.1.191 G PTS system fructose IIA component
JPDEFOMO_00358 0.0 levR K Sigma-54 interaction domain
JPDEFOMO_00359 7.4e-239 rpoN K Sigma-54 factor, core binding domain
JPDEFOMO_00360 1.4e-267 manR K PRD domain
JPDEFOMO_00361 6.2e-79 ptsN 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G phosphoenolpyruvate-dependent sugar phosphotransferase system
JPDEFOMO_00362 6.7e-173 4.1.2.13 G Fructose-bisphosphate aldolase class-II
JPDEFOMO_00363 2e-80 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_00364 2.3e-48 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_00365 1.8e-169 G Phosphotransferase System
JPDEFOMO_00366 2.1e-182 G Domain of unknown function (DUF4432)
JPDEFOMO_00367 5.8e-134 5.3.1.15 S Pfam:DUF1498
JPDEFOMO_00368 8.5e-284 xylB 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
JPDEFOMO_00369 2.3e-75 ptsN 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_00370 2.6e-283 frvB 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_00371 9.9e-230 malY 4.4.1.8 E Aminotransferase class I and II
JPDEFOMO_00372 0.0 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_00373 0.0 K Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_00374 1.1e-158 4.1.2.13 G Fructose-bisphosphate aldolase class-II
JPDEFOMO_00375 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G phosphotransferase system
JPDEFOMO_00376 1.3e-145 IQ Enoyl-(Acyl carrier protein) reductase
JPDEFOMO_00377 5.2e-75 2.7.1.191, 2.7.1.203 G PTS system fructose IIA component
JPDEFOMO_00378 3.1e-84 2.7.1.191, 2.7.1.203 G PTS system sorbose subfamily IIB component
JPDEFOMO_00379 5.4e-133 G PTS system sorbose-specific iic component
JPDEFOMO_00380 2.9e-154 G system, mannose fructose sorbose family IID component
JPDEFOMO_00381 4.6e-24 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
JPDEFOMO_00382 1.6e-92 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
JPDEFOMO_00383 1.9e-71 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
JPDEFOMO_00384 4.1e-113 dhaL 2.7.1.121 S Dak2
JPDEFOMO_00385 3.7e-185 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
JPDEFOMO_00386 8.7e-119 G Orotidine 5'-phosphate decarboxylase / HUMPS family
JPDEFOMO_00387 5.9e-100 hxlB 4.1.2.43, 5.3.1.27 M sugar phosphate isomerase involved in capsule formation
JPDEFOMO_00388 4.5e-132 K UTRA
JPDEFOMO_00389 1.3e-245 sorE E Alcohol dehydrogenase GroES-like domain
JPDEFOMO_00390 3.2e-175 sorC K sugar-binding domain protein
JPDEFOMO_00391 5.9e-146 IQ NAD dependent epimerase/dehydratase family
JPDEFOMO_00392 2e-68 sorF 2.7.1.191, 2.7.1.206 G PTS system fructose IIA component
JPDEFOMO_00393 7.2e-86 sorB 2.7.1.191, 2.7.1.206 G PTS system sorbose subfamily IIB component
JPDEFOMO_00394 3.4e-136 sorA U PTS system sorbose-specific iic component
JPDEFOMO_00395 4.3e-155 sorM G system, mannose fructose sorbose family IID component
JPDEFOMO_00396 4.4e-166 4.1.2.13 G Fructose-bisphosphate aldolase class-II
JPDEFOMO_00397 1.5e-264 P transporter
JPDEFOMO_00398 3e-237 C FAD dependent oxidoreductase
JPDEFOMO_00399 1e-159 K Transcriptional regulator, LysR family
JPDEFOMO_00400 7.6e-160 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
JPDEFOMO_00401 4.2e-98 S UPF0397 protein
JPDEFOMO_00402 0.0 ykoD P ABC transporter, ATP-binding protein
JPDEFOMO_00403 2.2e-148 cbiQ P cobalt transport
JPDEFOMO_00404 9.4e-22 K helix_turn_helix, arabinose operon control protein
JPDEFOMO_00405 1.4e-50
JPDEFOMO_00407 0.0 K Sigma-54 interaction domain
JPDEFOMO_00408 2.4e-72 levA G PTS system fructose IIA component
JPDEFOMO_00409 4.8e-90 2.7.1.191 G PTS system sorbose subfamily IIB component
JPDEFOMO_00410 4.1e-153 M PTS system sorbose-specific iic component
JPDEFOMO_00411 1.9e-147 levD G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_00412 2.3e-53
JPDEFOMO_00414 7.3e-126 S Haloacid dehalogenase-like hydrolase
JPDEFOMO_00415 4.5e-135 fruR K DeoR C terminal sensor domain
JPDEFOMO_00416 7e-113 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
JPDEFOMO_00417 7.9e-97 hxlB 4.1.2.43, 5.3.1.27 M SIS domain
JPDEFOMO_00418 0.0 mtlF 2.7.1.197 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_00419 3e-223 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
JPDEFOMO_00420 1.5e-194 odh 1.5.1.28 C NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
JPDEFOMO_00421 4.1e-133 E ABC transporter
JPDEFOMO_00422 6e-160 ET Bacterial periplasmic substrate-binding proteins
JPDEFOMO_00423 2.9e-114 P Binding-protein-dependent transport system inner membrane component
JPDEFOMO_00424 1.3e-117 P Binding-protein-dependent transport system inner membrane component
JPDEFOMO_00425 9.4e-239 kgtP EGP Sugar (and other) transporter
JPDEFOMO_00427 8.1e-12 S YvrJ protein family
JPDEFOMO_00428 1.8e-144 3.2.1.17 M hydrolase, family 25
JPDEFOMO_00429 3.4e-132 VY92_08700 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JPDEFOMO_00430 2.1e-114 C Flavodoxin
JPDEFOMO_00431 6.7e-87 ygfC K Bacterial regulatory proteins, tetR family
JPDEFOMO_00432 1e-185 hrtB V ABC transporter permease
JPDEFOMO_00433 1.1e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
JPDEFOMO_00434 2.7e-39 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_00435 8.9e-65 S Phage derived protein Gp49-like (DUF891)
JPDEFOMO_00436 2e-263 npr 1.11.1.1 C NADH oxidase
JPDEFOMO_00437 1.7e-151 S hydrolase
JPDEFOMO_00438 4.9e-44 S Bacterial toxin of type II toxin-antitoxin system, YafQ
JPDEFOMO_00439 1.6e-185 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
JPDEFOMO_00440 3e-84 2.7.1.191 G PTS system sorbose subfamily IIB component
JPDEFOMO_00441 2.8e-127 G PTS system sorbose-specific iic component
JPDEFOMO_00442 8.2e-154 G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_00443 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
JPDEFOMO_00444 6.8e-69 2.7.1.191 G PTS system fructose IIA component
JPDEFOMO_00445 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
JPDEFOMO_00446 2.2e-120 V ABC transporter
JPDEFOMO_00447 1e-193 md2 V ABC transporter
JPDEFOMO_00448 9.8e-308 yfiB V ABC transporter transmembrane region
JPDEFOMO_00450 0.0 pip V domain protein
JPDEFOMO_00451 2.3e-156 metQ_4 P Belongs to the nlpA lipoprotein family
JPDEFOMO_00452 1.3e-198 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
JPDEFOMO_00453 1.3e-83
JPDEFOMO_00454 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
JPDEFOMO_00455 4.4e-14
JPDEFOMO_00456 3.7e-102 K Bacterial regulatory proteins, tetR family
JPDEFOMO_00457 7.3e-59 dhaM 2.7.1.121 S PTS system fructose IIA component
JPDEFOMO_00458 7.7e-103 dhaL 2.7.1.121 S Dak2
JPDEFOMO_00459 1.4e-189 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
JPDEFOMO_00460 8.2e-78 ohr O OsmC-like protein
JPDEFOMO_00461 2.8e-271 L Exonuclease
JPDEFOMO_00462 9.4e-49 K Helix-turn-helix domain
JPDEFOMO_00463 5.6e-206 yceJ EGP Major facilitator Superfamily
JPDEFOMO_00464 4.9e-108 K Transcriptional
JPDEFOMO_00465 1.7e-107 tag 3.2.2.20 L glycosylase
JPDEFOMO_00466 1e-167 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
JPDEFOMO_00467 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
JPDEFOMO_00469 3.2e-197 V Beta-lactamase
JPDEFOMO_00470 2.6e-143 H Protein of unknown function (DUF1698)
JPDEFOMO_00471 3.4e-143 puuD S peptidase C26
JPDEFOMO_00472 8.1e-257 6.3.1.2 E Glutamine synthetase, catalytic domain
JPDEFOMO_00473 2.2e-223 S Amidohydrolase
JPDEFOMO_00474 1.8e-248 E Amino acid permease
JPDEFOMO_00475 6.5e-75 K helix_turn_helix, mercury resistance
JPDEFOMO_00476 8e-165 morA2 S reductase
JPDEFOMO_00477 1.3e-201 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
JPDEFOMO_00478 9.9e-58 hxlR K Transcriptional regulator, HxlR family
JPDEFOMO_00479 8.5e-97
JPDEFOMO_00480 4.8e-292 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JPDEFOMO_00481 4e-57 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
JPDEFOMO_00482 8.6e-229 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JPDEFOMO_00483 1.5e-49 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_00484 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GKT Mga helix-turn-helix domain
JPDEFOMO_00485 7e-104 L Resolvase, N terminal domain
JPDEFOMO_00486 9e-110 M domain protein
JPDEFOMO_00487 1.1e-124 L Transposase and inactivated derivatives, IS30 family
JPDEFOMO_00488 0.0 yvcC M Cna protein B-type domain
JPDEFOMO_00489 1e-72 M LPXTG cell wall anchor motif
JPDEFOMO_00490 1.1e-198 3.4.22.70 M Sortase family
JPDEFOMO_00491 1.6e-129 XK27_12140 V ATPases associated with a variety of cellular activities
JPDEFOMO_00492 1.5e-198 S Psort location CytoplasmicMembrane, score
JPDEFOMO_00493 3.9e-87 S Psort location CytoplasmicMembrane, score
JPDEFOMO_00494 4.1e-127 K Transcriptional regulatory protein, C terminal
JPDEFOMO_00495 3.5e-197 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
JPDEFOMO_00496 1.8e-140 V ATPases associated with a variety of cellular activities
JPDEFOMO_00497 1.2e-211
JPDEFOMO_00498 1.4e-94
JPDEFOMO_00499 0.0 O Belongs to the peptidase S8 family
JPDEFOMO_00500 0.0 O Belongs to the peptidase S8 family
JPDEFOMO_00501 0.0 O Belongs to the peptidase S8 family
JPDEFOMO_00502 0.0 pepN 3.4.11.2 E aminopeptidase
JPDEFOMO_00503 7.1e-275 ycaM E amino acid
JPDEFOMO_00504 2.5e-78 S Protein of unknown function (DUF1440)
JPDEFOMO_00505 7.5e-166 K Transcriptional regulator, LysR family
JPDEFOMO_00506 5.6e-158 G Xylose isomerase-like TIM barrel
JPDEFOMO_00507 1.7e-140 IQ Enoyl-(Acyl carrier protein) reductase
JPDEFOMO_00508 4.5e-163 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JPDEFOMO_00509 2.2e-213 ydiN EGP Major Facilitator Superfamily
JPDEFOMO_00510 3.3e-169 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JPDEFOMO_00511 7.3e-160 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
JPDEFOMO_00512 4.6e-174 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
JPDEFOMO_00513 8.6e-136 L Helix-turn-helix domain
JPDEFOMO_00514 3.3e-166 L hmm pf00665
JPDEFOMO_00515 8.6e-45 L 4.5 Transposon and IS
JPDEFOMO_00516 6.3e-30 lsgC M Glycosyl transferases group 1
JPDEFOMO_00517 6e-60 XK27_08435 K UTRA
JPDEFOMO_00518 1.2e-166 agaS G SIS domain
JPDEFOMO_00519 1.5e-132 agaB 2.7.1.191 K PTS system sorbose subfamily IIB component
JPDEFOMO_00520 4.1e-110 agaC G PTS system sorbose-specific iic component
JPDEFOMO_00521 5.5e-123 G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_00522 4.2e-29 G PTS system fructose IIA component
JPDEFOMO_00523 6.7e-23 S Sterol carrier protein domain
JPDEFOMO_00524 1.9e-86 M glutamine-fructose-6-phosphate transaminase (isomerizing) activity
JPDEFOMO_00525 6e-20
JPDEFOMO_00526 2.7e-71 tnp L DDE domain
JPDEFOMO_00527 1.6e-79 K helix_turn _helix lactose operon repressor
JPDEFOMO_00528 1.1e-203 G PTS system
JPDEFOMO_00529 3.4e-70 rpe 5.1.3.1 G Ribulose-phosphate 3 epimerase family
JPDEFOMO_00530 7.6e-54 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
JPDEFOMO_00533 2.2e-27
JPDEFOMO_00535 6.7e-223 L Belongs to the 'phage' integrase family
JPDEFOMO_00536 2.2e-09
JPDEFOMO_00540 2.1e-134
JPDEFOMO_00541 6e-20 E Zn peptidase
JPDEFOMO_00542 7.5e-61 ps115 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_00545 1e-156 ps305 S Protein of unknown function (Hypoth_ymh)
JPDEFOMO_00546 1.1e-138 S ORF6N domain
JPDEFOMO_00548 7.8e-44 S Domain of unknown function (DUF1883)
JPDEFOMO_00554 7.7e-140 L Helix-turn-helix domain
JPDEFOMO_00555 3.2e-155 dnaC L IstB-like ATP binding protein
JPDEFOMO_00557 2.1e-70
JPDEFOMO_00558 3.7e-134
JPDEFOMO_00561 1.1e-77
JPDEFOMO_00565 6.3e-159
JPDEFOMO_00566 1.4e-49
JPDEFOMO_00567 3.1e-56
JPDEFOMO_00569 7.8e-57 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
JPDEFOMO_00570 4.4e-20
JPDEFOMO_00571 3e-23
JPDEFOMO_00572 1.6e-172 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
JPDEFOMO_00573 3.2e-22
JPDEFOMO_00575 3.8e-41 soj D CobQ CobB MinD ParA nucleotide binding domain protein
JPDEFOMO_00576 1.7e-79 repA S Replication initiator protein A
JPDEFOMO_00583 5.4e-116 M Peptidase_C39 like family
JPDEFOMO_00585 2.6e-74 M Peptidase_C39 like family
JPDEFOMO_00586 2.9e-49 M Cna B domain protein
JPDEFOMO_00587 9.3e-12 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JPDEFOMO_00594 5.2e-31
JPDEFOMO_00595 2.2e-221 M Domain of unknown function (DUF5011)
JPDEFOMO_00598 0.0 U TraM recognition site of TraD and TraG
JPDEFOMO_00599 7.5e-270 5.4.99.21 S domain, Protein
JPDEFOMO_00601 1.5e-106
JPDEFOMO_00602 0.0 trsE S COG0433 Predicted ATPase
JPDEFOMO_00603 1.3e-187 M cysteine-type peptidase activity
JPDEFOMO_00610 3.8e-224 3.1.1.32, 3.1.1.4 S COG0790 FOG TPR repeat, SEL1 subfamily
JPDEFOMO_00612 0.0 L Protein of unknown function (DUF3991)
JPDEFOMO_00613 1.6e-64
JPDEFOMO_00614 1.6e-14
JPDEFOMO_00615 5.2e-75
JPDEFOMO_00617 4.4e-74
JPDEFOMO_00619 2.9e-159 L PFAM Integrase catalytic region
JPDEFOMO_00620 3e-26 L Helix-turn-helix domain
JPDEFOMO_00621 1.3e-41
JPDEFOMO_00622 0.0 pacL 3.6.3.8 P P-type ATPase
JPDEFOMO_00624 5.8e-64 S Protein of unknown function (DUF1093)
JPDEFOMO_00625 7.8e-185 CP_0155 3.5.1.28 M Glycosyl hydrolases family 25
JPDEFOMO_00626 2.1e-148
JPDEFOMO_00627 3.2e-214 metC 4.4.1.8 E cystathionine
JPDEFOMO_00628 3e-145 tcyA ET Belongs to the bacterial solute-binding protein 3 family
JPDEFOMO_00629 1.1e-122 tcyB E ABC transporter
JPDEFOMO_00630 1.1e-31
JPDEFOMO_00631 7.4e-245 brnQ U Component of the transport system for branched-chain amino acids
JPDEFOMO_00632 2.2e-117 S WxL domain surface cell wall-binding
JPDEFOMO_00633 3.8e-174 S Cell surface protein
JPDEFOMO_00634 3.5e-24
JPDEFOMO_00635 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
JPDEFOMO_00636 1.8e-114 S WxL domain surface cell wall-binding
JPDEFOMO_00637 4.2e-59
JPDEFOMO_00638 8.3e-104 N WxL domain surface cell wall-binding
JPDEFOMO_00639 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
JPDEFOMO_00640 4.6e-177 yicL EG EamA-like transporter family
JPDEFOMO_00641 0.0
JPDEFOMO_00642 7.6e-146 CcmA5 V ABC transporter
JPDEFOMO_00643 3.8e-88 S ECF-type riboflavin transporter, S component
JPDEFOMO_00644 2.6e-149 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
JPDEFOMO_00645 1.6e-165 metF 1.5.1.20 C Methylenetetrahydrofolate reductase
JPDEFOMO_00646 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JPDEFOMO_00647 0.0 XK27_09600 V ABC transporter, ATP-binding protein
JPDEFOMO_00648 0.0 V ABC transporter
JPDEFOMO_00649 4.2e-223 oxlT P Major Facilitator Superfamily
JPDEFOMO_00650 2.9e-128 treR K UTRA
JPDEFOMO_00651 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
JPDEFOMO_00652 0.0 treB 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JPDEFOMO_00653 7.2e-218 sstT U Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JPDEFOMO_00654 6.6e-268 yfnA E Amino Acid
JPDEFOMO_00655 1.7e-173 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
JPDEFOMO_00656 1.9e-253 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
JPDEFOMO_00657 4.6e-31 K 'Cold-shock' DNA-binding domain
JPDEFOMO_00658 3.8e-70
JPDEFOMO_00659 1.6e-76 O OsmC-like protein
JPDEFOMO_00660 3.6e-282 lsa S ABC transporter
JPDEFOMO_00661 2.1e-114 ylbE GM NAD(P)H-binding
JPDEFOMO_00662 5.4e-07 yeaE S Aldo/keto reductase family
JPDEFOMO_00663 2.2e-159 yeaE S Aldo/keto reductase family
JPDEFOMO_00664 2e-250 yifK E Amino acid permease
JPDEFOMO_00665 8.7e-264 S Protein of unknown function (DUF3800)
JPDEFOMO_00666 0.0 yjcE P Sodium proton antiporter
JPDEFOMO_00667 1.5e-44 S Protein of unknown function (DUF3021)
JPDEFOMO_00668 5.8e-74 K LytTr DNA-binding domain
JPDEFOMO_00669 1.6e-149 cylB V ABC-2 type transporter
JPDEFOMO_00670 1.8e-164 cylA V ABC transporter
JPDEFOMO_00671 2.3e-147 S Alpha/beta hydrolase of unknown function (DUF915)
JPDEFOMO_00672 6.5e-81 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
JPDEFOMO_00673 2.8e-31 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
JPDEFOMO_00674 2.6e-52 ybjQ S Belongs to the UPF0145 family
JPDEFOMO_00675 7.1e-164 3.5.1.10 C nadph quinone reductase
JPDEFOMO_00676 1.3e-246 amt P ammonium transporter
JPDEFOMO_00677 9.6e-180 yfeX P Peroxidase
JPDEFOMO_00678 2e-118 yhiD S MgtC family
JPDEFOMO_00679 3.4e-117 F DNA RNA non-specific endonuclease
JPDEFOMO_00680 2.2e-29 gluP 3.4.21.105 S proteolysis
JPDEFOMO_00681 7.9e-123 gluP 3.4.21.105 S proteolysis
JPDEFOMO_00682 0.0 ybiT S ABC transporter, ATP-binding protein
JPDEFOMO_00683 0.0 mutS L ATPase domain of DNA mismatch repair MUTS family
JPDEFOMO_00684 3.1e-112 ung2 3.2.2.27 L Uracil-DNA glycosylase
JPDEFOMO_00685 1.1e-130 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
JPDEFOMO_00686 8.4e-305 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
JPDEFOMO_00687 5e-295 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JPDEFOMO_00688 7.7e-137 epsG 2.4.1.293 GT2 M Glycosyltransferase like family 2
JPDEFOMO_00689 2.9e-154 lacT K PRD domain
JPDEFOMO_00690 0.0 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
JPDEFOMO_00691 1e-286 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
JPDEFOMO_00692 2.3e-51 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
JPDEFOMO_00693 3.3e-222 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JPDEFOMO_00694 3.6e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JPDEFOMO_00695 4.5e-285 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
JPDEFOMO_00696 5.4e-165 K Transcriptional regulator
JPDEFOMO_00697 3.4e-199 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
JPDEFOMO_00700 7.2e-86 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_00701 1.4e-50 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_00702 7.2e-267 gatC G PTS system sugar-specific permease component
JPDEFOMO_00703 1.9e-26
JPDEFOMO_00704 4.7e-128 S Domain of unknown function (DUF4867)
JPDEFOMO_00705 7.6e-177 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
JPDEFOMO_00706 3.9e-187 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
JPDEFOMO_00707 4.4e-94 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
JPDEFOMO_00708 2.7e-73 lacA 5.3.1.26 G Ribose/Galactose Isomerase
JPDEFOMO_00709 4.2e-141 lacR K DeoR C terminal sensor domain
JPDEFOMO_00710 3.8e-116 gph 3.1.3.18 S HAD hydrolase, family IA, variant
JPDEFOMO_00711 1.3e-212 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
JPDEFOMO_00712 0.0 sbcC L Putative exonuclease SbcCD, C subunit
JPDEFOMO_00713 2.1e-14
JPDEFOMO_00714 2.2e-76 hsp1 O Belongs to the small heat shock protein (HSP20) family
JPDEFOMO_00716 3.9e-209 mutY L A G-specific adenine glycosylase
JPDEFOMO_00717 8.6e-150 cytC6 I alpha/beta hydrolase fold
JPDEFOMO_00718 9.4e-121 yrkL S Flavodoxin-like fold
JPDEFOMO_00720 1e-85 S Short repeat of unknown function (DUF308)
JPDEFOMO_00721 4.1e-118 S Psort location Cytoplasmic, score
JPDEFOMO_00722 1.6e-154 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
JPDEFOMO_00723 7.5e-197
JPDEFOMO_00725 5.2e-116 ywnB S NAD(P)H-binding
JPDEFOMO_00726 0.0 bglB 3.2.1.21 GH3 G hydrolase, family 3
JPDEFOMO_00727 1.6e-166 XK27_00670 S ABC transporter substrate binding protein
JPDEFOMO_00728 1.1e-165 XK27_00670 S ABC transporter
JPDEFOMO_00729 4.9e-155 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
JPDEFOMO_00730 4e-142 cmpC S ABC transporter, ATP-binding protein
JPDEFOMO_00731 5.5e-175 yhfP 1.1.1.1 C Zinc-binding dehydrogenase
JPDEFOMO_00732 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
JPDEFOMO_00733 6.2e-182 ykcC GT2 M Glycosyl transferase family 2
JPDEFOMO_00734 0.0 ykcB M Dolichyl-phosphate-mannose-protein mannosyltransferase
JPDEFOMO_00735 1.9e-71 S GtrA-like protein
JPDEFOMO_00736 5.3e-124 K cheY-homologous receiver domain
JPDEFOMO_00737 2.4e-242 ciaH 2.7.13.3 T His Kinase A (phosphoacceptor) domain
JPDEFOMO_00738 3.1e-68 yqkB S Belongs to the HesB IscA family
JPDEFOMO_00739 1.5e-272 QT PucR C-terminal helix-turn-helix domain
JPDEFOMO_00740 1.3e-162 ptlF S KR domain
JPDEFOMO_00741 6.4e-159 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
JPDEFOMO_00742 3.4e-123 drgA C Nitroreductase family
JPDEFOMO_00743 1.4e-206 lctO C IMP dehydrogenase / GMP reductase domain
JPDEFOMO_00746 4.1e-192 K DNA-binding helix-turn-helix protein
JPDEFOMO_00747 1.5e-58 K Transcriptional regulator PadR-like family
JPDEFOMO_00748 1.2e-41 ygbF S Sugar efflux transporter for intercellular exchange
JPDEFOMO_00749 8.7e-42
JPDEFOMO_00750 8.2e-193 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
JPDEFOMO_00751 3.1e-54
JPDEFOMO_00752 1.5e-80
JPDEFOMO_00753 3.2e-209 yubA S AI-2E family transporter
JPDEFOMO_00754 3.1e-24
JPDEFOMO_00755 1.5e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JPDEFOMO_00756 4.9e-47
JPDEFOMO_00757 1.6e-166 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
JPDEFOMO_00758 2.5e-88 ywrF S Flavin reductase like domain
JPDEFOMO_00759 1.2e-70
JPDEFOMO_00760 7.9e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JPDEFOMO_00761 5.7e-61 yeaO S Protein of unknown function, DUF488
JPDEFOMO_00762 1.3e-173 corA P CorA-like Mg2+ transporter protein
JPDEFOMO_00763 1.9e-158 mleR K LysR family
JPDEFOMO_00764 0.0 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
JPDEFOMO_00765 3.2e-170 mleP S Sodium Bile acid symporter family
JPDEFOMO_00766 1.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JPDEFOMO_00767 5.5e-86 C FMN binding
JPDEFOMO_00768 2.6e-172 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_00769 1.6e-291 V ABC transporter transmembrane region
JPDEFOMO_00770 0.0 pepF E Oligopeptidase F
JPDEFOMO_00771 1.2e-58
JPDEFOMO_00772 1.2e-132 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JPDEFOMO_00773 1.7e-81 ndk 2.7.4.6 F Belongs to the NDK family
JPDEFOMO_00774 0.0 yfgQ P E1-E2 ATPase
JPDEFOMO_00775 3.8e-181 3.4.11.5 I carboxylic ester hydrolase activity
JPDEFOMO_00776 2.6e-45
JPDEFOMO_00777 2.6e-94 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JPDEFOMO_00778 8.7e-199 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
JPDEFOMO_00779 2.2e-122 gph 3.1.3.18 S haloacid dehalogenase-like hydrolase
JPDEFOMO_00780 8.8e-78 K Transcriptional regulator
JPDEFOMO_00781 9.5e-180 D Alpha beta
JPDEFOMO_00782 1.1e-83 nrdI F Belongs to the NrdI family
JPDEFOMO_00783 2.6e-157 dkgB S reductase
JPDEFOMO_00784 1.4e-157
JPDEFOMO_00785 2e-144 S Alpha beta hydrolase
JPDEFOMO_00786 6.6e-119 yviA S Protein of unknown function (DUF421)
JPDEFOMO_00787 7.8e-62 S Protein of unknown function (DUF3290)
JPDEFOMO_00788 1.2e-221 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
JPDEFOMO_00789 2.2e-87 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
JPDEFOMO_00790 1.4e-104 yjbF S SNARE associated Golgi protein
JPDEFOMO_00791 6e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JPDEFOMO_00792 3.2e-189 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JPDEFOMO_00793 2.1e-207 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JPDEFOMO_00794 2.3e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
JPDEFOMO_00795 2.4e-66 yajC U Preprotein translocase
JPDEFOMO_00796 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JPDEFOMO_00797 2.3e-116 sirR K Helix-turn-helix diphteria tox regulatory element
JPDEFOMO_00798 6.6e-292 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JPDEFOMO_00799 4.1e-206 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JPDEFOMO_00800 2.3e-240 ytoI K DRTGG domain
JPDEFOMO_00801 3.7e-179 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
JPDEFOMO_00802 1.1e-250 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
JPDEFOMO_00803 1.2e-174
JPDEFOMO_00804 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JPDEFOMO_00806 4e-43 yrzL S Belongs to the UPF0297 family
JPDEFOMO_00807 1.6e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JPDEFOMO_00808 6.8e-53 yrzB S Belongs to the UPF0473 family
JPDEFOMO_00809 5.8e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JPDEFOMO_00810 9.5e-92 cvpA S Colicin V production protein
JPDEFOMO_00811 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JPDEFOMO_00812 6.6e-53 trxA O Belongs to the thioredoxin family
JPDEFOMO_00813 6.1e-20 dltX S D-Ala-teichoic acid biosynthesis protein
JPDEFOMO_00814 3.8e-295 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JPDEFOMO_00815 2.6e-238 dltB M MBOAT, membrane-bound O-acyltransferase family
JPDEFOMO_00816 1.2e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JPDEFOMO_00817 1.4e-245 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JPDEFOMO_00818 2.5e-86 yslB S Protein of unknown function (DUF2507)
JPDEFOMO_00819 1e-276 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
JPDEFOMO_00820 2.5e-97 S Phosphoesterase
JPDEFOMO_00821 2.5e-135 gla U Major intrinsic protein
JPDEFOMO_00822 2.1e-85 ykuL S CBS domain
JPDEFOMO_00823 6.8e-159 XK27_00890 S Domain of unknown function (DUF368)
JPDEFOMO_00824 1.2e-152 ykuT M mechanosensitive ion channel
JPDEFOMO_00825 6e-12 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JPDEFOMO_00826 1.2e-86 ytxH S YtxH-like protein
JPDEFOMO_00827 1e-90 niaR S 3H domain
JPDEFOMO_00828 2.8e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
JPDEFOMO_00829 6e-180 ccpA K catabolite control protein A
JPDEFOMO_00830 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
JPDEFOMO_00831 1.8e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S HAD-hyrolase-like
JPDEFOMO_00832 9.5e-138 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
JPDEFOMO_00833 1.1e-272 pepV 3.5.1.18 E dipeptidase PepV
JPDEFOMO_00834 1.1e-258 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
JPDEFOMO_00835 2.7e-54
JPDEFOMO_00836 7.5e-189 yibE S overlaps another CDS with the same product name
JPDEFOMO_00837 1.4e-114 yibF S overlaps another CDS with the same product name
JPDEFOMO_00838 6.3e-116 S Calcineurin-like phosphoesterase
JPDEFOMO_00839 8e-268 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
JPDEFOMO_00840 5.5e-118 yutD S Protein of unknown function (DUF1027)
JPDEFOMO_00841 2.8e-145 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
JPDEFOMO_00842 1.1e-112 S Protein of unknown function (DUF1461)
JPDEFOMO_00843 1.2e-115 dedA S SNARE-like domain protein
JPDEFOMO_00844 6.7e-87 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
JPDEFOMO_00845 2.1e-185 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
JPDEFOMO_00846 5.9e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JPDEFOMO_00847 1.1e-62 yugI 5.3.1.9 J general stress protein
JPDEFOMO_00848 6.3e-19 S COG NOG38524 non supervised orthologous group
JPDEFOMO_00849 4e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
JPDEFOMO_00853 6.6e-71
JPDEFOMO_00854 1.1e-209 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JPDEFOMO_00855 4e-265 emrY EGP Major facilitator Superfamily
JPDEFOMO_00856 2.7e-82 merR K MerR HTH family regulatory protein
JPDEFOMO_00857 6.2e-266 lmrB EGP Major facilitator Superfamily
JPDEFOMO_00858 8.1e-110 S Domain of unknown function (DUF4811)
JPDEFOMO_00859 1.9e-121 3.6.1.27 I Acid phosphatase homologues
JPDEFOMO_00860 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
JPDEFOMO_00861 2.2e-280 ytgP S Polysaccharide biosynthesis protein
JPDEFOMO_00862 3.4e-129 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JPDEFOMO_00863 4e-33 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
JPDEFOMO_00864 4.8e-143 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JPDEFOMO_00865 3.9e-95 FNV0100 F NUDIX domain
JPDEFOMO_00867 2.2e-290 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
JPDEFOMO_00868 1.1e-305 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
JPDEFOMO_00869 3.7e-87 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
JPDEFOMO_00872 2.3e-234 malY 4.4.1.8 E Aminotransferase, class I
JPDEFOMO_00873 7.7e-260 cpdA S Calcineurin-like phosphoesterase
JPDEFOMO_00874 1e-38 gcvR T Belongs to the UPF0237 family
JPDEFOMO_00875 1.9e-245 XK27_08635 S UPF0210 protein
JPDEFOMO_00876 4.3e-213 coiA 3.6.4.12 S Competence protein
JPDEFOMO_00877 3.3e-115 yjbH Q Thioredoxin
JPDEFOMO_00878 2e-106 yjbK S CYTH
JPDEFOMO_00879 1.3e-122 yjbM 2.7.6.5 S RelA SpoT domain protein
JPDEFOMO_00880 4.6e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JPDEFOMO_00881 7.8e-171 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
JPDEFOMO_00882 1.1e-203 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JPDEFOMO_00883 1.4e-113 cutC P Participates in the control of copper homeostasis
JPDEFOMO_00884 1.8e-145 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
JPDEFOMO_00885 3.2e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
JPDEFOMO_00886 2.5e-62 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
JPDEFOMO_00887 3.5e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JPDEFOMO_00888 3.3e-191 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JPDEFOMO_00889 5.7e-172 corA P CorA-like Mg2+ transporter protein
JPDEFOMO_00890 6.6e-156 rrmA 2.1.1.187 H Methyltransferase
JPDEFOMO_00891 9.4e-97 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JPDEFOMO_00892 8.4e-72 WQ51_03320 S Protein of unknown function (DUF1149)
JPDEFOMO_00893 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
JPDEFOMO_00894 3.8e-232 ymfF S Peptidase M16 inactive domain protein
JPDEFOMO_00895 1.3e-243 ymfH S Peptidase M16
JPDEFOMO_00896 2e-129 IQ Enoyl-(Acyl carrier protein) reductase
JPDEFOMO_00897 1.3e-109 ymfM S Helix-turn-helix domain
JPDEFOMO_00898 1.4e-104 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JPDEFOMO_00899 4.1e-231 cinA 3.5.1.42 S Belongs to the CinA family
JPDEFOMO_00900 1.6e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JPDEFOMO_00901 3.1e-231 rny S Endoribonuclease that initiates mRNA decay
JPDEFOMO_00902 1.8e-116 yvyE 3.4.13.9 S YigZ family
JPDEFOMO_00903 1.1e-236 comFA L Helicase C-terminal domain protein
JPDEFOMO_00904 6.6e-82 comFC S Competence protein
JPDEFOMO_00905 2.1e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JPDEFOMO_00906 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JPDEFOMO_00907 3.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JPDEFOMO_00908 5.4e-124 ftsE D ABC transporter
JPDEFOMO_00909 1.7e-157 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
JPDEFOMO_00910 3.6e-202 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
JPDEFOMO_00911 2.4e-130 K response regulator
JPDEFOMO_00912 1.1e-308 phoR 2.7.13.3 T Histidine kinase
JPDEFOMO_00913 2.8e-154 pstS P Phosphate
JPDEFOMO_00914 4e-154 pstC P probably responsible for the translocation of the substrate across the membrane
JPDEFOMO_00915 4.8e-157 pstA P Phosphate transport system permease protein PstA
JPDEFOMO_00916 3.1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JPDEFOMO_00917 9.3e-141 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JPDEFOMO_00918 1e-119 phoU P Plays a role in the regulation of phosphate uptake
JPDEFOMO_00919 2.1e-261 yvlB S Putative adhesin
JPDEFOMO_00920 1.4e-30
JPDEFOMO_00921 5.7e-34 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
JPDEFOMO_00922 2.1e-174 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JPDEFOMO_00923 2e-157 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JPDEFOMO_00924 6.9e-195 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
JPDEFOMO_00925 3e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JPDEFOMO_00926 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
JPDEFOMO_00927 2.2e-114 T Transcriptional regulatory protein, C terminal
JPDEFOMO_00928 9e-176 T His Kinase A (phosphoacceptor) domain
JPDEFOMO_00929 2e-91 V ABC transporter
JPDEFOMO_00930 0.0 V FtsX-like permease family
JPDEFOMO_00931 6.5e-119 yfbR S HD containing hydrolase-like enzyme
JPDEFOMO_00932 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JPDEFOMO_00933 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
JPDEFOMO_00934 5.1e-85 S Short repeat of unknown function (DUF308)
JPDEFOMO_00935 9.7e-166 rapZ S Displays ATPase and GTPase activities
JPDEFOMO_00936 2.4e-192 ybhK S Required for morphogenesis under gluconeogenic growth conditions
JPDEFOMO_00937 3.3e-172 whiA K May be required for sporulation
JPDEFOMO_00938 8.4e-81 ohrR K helix_turn_helix multiple antibiotic resistance protein
JPDEFOMO_00939 1.9e-101 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JPDEFOMO_00942 4e-187 cggR K Putative sugar-binding domain
JPDEFOMO_00943 2.8e-193 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JPDEFOMO_00944 4.4e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
JPDEFOMO_00945 7.8e-140 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JPDEFOMO_00946 1.1e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JPDEFOMO_00947 5.5e-231 mdt(A) EGP Major facilitator Superfamily
JPDEFOMO_00948 7.4e-49
JPDEFOMO_00949 1.7e-293 clcA P chloride
JPDEFOMO_00950 2.4e-31 secG U Preprotein translocase
JPDEFOMO_00951 1.5e-140 est 3.1.1.1 S Serine aminopeptidase, S33
JPDEFOMO_00952 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
JPDEFOMO_00953 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
JPDEFOMO_00954 2e-177 yvdE K helix_turn _helix lactose operon repressor
JPDEFOMO_00955 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
JPDEFOMO_00956 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
JPDEFOMO_00957 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
JPDEFOMO_00958 1.2e-118 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
JPDEFOMO_00959 1.6e-210 msmX P Belongs to the ABC transporter superfamily
JPDEFOMO_00960 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
JPDEFOMO_00961 1.3e-224 malE G Bacterial extracellular solute-binding protein
JPDEFOMO_00962 8.5e-230 malF P Binding-protein-dependent transport system inner membrane component
JPDEFOMO_00963 5e-151 malG P ABC transporter permease
JPDEFOMO_00964 1.3e-16
JPDEFOMO_00965 3.2e-26 ydcG K Helix-turn-helix XRE-family like proteins
JPDEFOMO_00966 4e-242 YSH1 S Metallo-beta-lactamase superfamily
JPDEFOMO_00967 3e-232 malE G Bacterial extracellular solute-binding protein
JPDEFOMO_00968 1.9e-147 malF G Binding-protein-dependent transport system inner membrane component
JPDEFOMO_00969 5.7e-166 malG P ABC-type sugar transport systems, permease components
JPDEFOMO_00970 3.5e-194 malK P ATPases associated with a variety of cellular activities
JPDEFOMO_00995 2.1e-94 sigH K DNA-templated transcription, initiation
JPDEFOMO_00996 6.5e-283 ybeC E amino acid
JPDEFOMO_00997 1.2e-230 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
JPDEFOMO_00998 5e-198 cpoA GT4 M Glycosyltransferase, group 1 family protein
JPDEFOMO_00999 1.9e-165 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JPDEFOMO_01001 5.9e-219 patA 2.6.1.1 E Aminotransferase
JPDEFOMO_01002 1.9e-43 ykuJ S Protein of unknown function (DUF1797)
JPDEFOMO_01003 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JPDEFOMO_01004 4e-80 perR P Belongs to the Fur family
JPDEFOMO_01005 2.6e-82 3.2.2.20 K Acetyltransferase (GNAT) domain
JPDEFOMO_01006 9e-92 yxjI
JPDEFOMO_01007 8.3e-157 ycsE S Sucrose-6F-phosphate phosphohydrolase
JPDEFOMO_01008 6.6e-130 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JPDEFOMO_01009 5.5e-178 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
JPDEFOMO_01010 1.6e-82 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
JPDEFOMO_01012 2.1e-168 natA S ABC transporter, ATP-binding protein
JPDEFOMO_01013 9.1e-218 ysdA CP ABC-2 family transporter protein
JPDEFOMO_01014 2.4e-98 dnaQ 2.7.7.7 L DNA polymerase III
JPDEFOMO_01015 7.5e-151 xth 3.1.11.2 L exodeoxyribonuclease III
JPDEFOMO_01016 2.4e-167 murB 1.3.1.98 M Cell wall formation
JPDEFOMO_01017 0.0 yjcE P Sodium proton antiporter
JPDEFOMO_01018 2.9e-96 puuR K Cupin domain
JPDEFOMO_01019 4e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JPDEFOMO_01020 5.5e-147 potB P ABC transporter permease
JPDEFOMO_01021 4.1e-142 potC P ABC transporter permease
JPDEFOMO_01022 8e-207 potD P ABC transporter
JPDEFOMO_01024 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
JPDEFOMO_01025 1.1e-110 K Transcriptional regulator
JPDEFOMO_01026 2.2e-186 V ABC transporter
JPDEFOMO_01027 1.2e-112 V AAA domain, putative AbiEii toxin, Type IV TA system
JPDEFOMO_01028 2.2e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JPDEFOMO_01029 6.3e-167 ybbR S YbbR-like protein
JPDEFOMO_01030 2.4e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JPDEFOMO_01031 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JPDEFOMO_01033 0.0 pepF2 E Oligopeptidase F
JPDEFOMO_01034 1.5e-78 S VanZ like family
JPDEFOMO_01035 7.6e-132 yebC K Transcriptional regulatory protein
JPDEFOMO_01036 3.2e-153 comGA NU Type II IV secretion system protein
JPDEFOMO_01037 6.9e-170 comGB NU type II secretion system
JPDEFOMO_01038 1.9e-26
JPDEFOMO_01040 1.6e-22
JPDEFOMO_01041 6.4e-20
JPDEFOMO_01042 2.7e-10
JPDEFOMO_01043 1.6e-185 ytxK 2.1.1.72 L N-6 DNA Methylase
JPDEFOMO_01044 3.1e-51
JPDEFOMO_01045 2.4e-256 cycA E Amino acid permease
JPDEFOMO_01046 1.3e-147 arbV 2.3.1.51 I Phosphate acyltransferases
JPDEFOMO_01047 6.6e-164 arbx M Glycosyl transferase family 8
JPDEFOMO_01048 3.2e-183 arbY M family 8
JPDEFOMO_01049 1.9e-166 arbZ I Phosphate acyltransferases
JPDEFOMO_01050 0.0 rafA 3.2.1.22 G alpha-galactosidase
JPDEFOMO_01053 4.4e-70 S SdpI/YhfL protein family
JPDEFOMO_01054 2.8e-134 K response regulator
JPDEFOMO_01055 5.7e-272 T PhoQ Sensor
JPDEFOMO_01056 2.5e-32 yhbS S acetyltransferase
JPDEFOMO_01057 7e-14
JPDEFOMO_01058 4e-72 pheB 5.4.99.5 S Belongs to the UPF0735 family
JPDEFOMO_01059 1e-63
JPDEFOMO_01060 5.9e-55
JPDEFOMO_01061 9e-253 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
JPDEFOMO_01063 1.1e-193 S response to antibiotic
JPDEFOMO_01064 5.7e-133 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
JPDEFOMO_01065 3.8e-27 yjgN S Bacterial protein of unknown function (DUF898)
JPDEFOMO_01067 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
JPDEFOMO_01068 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JPDEFOMO_01069 3.1e-212 camS S sex pheromone
JPDEFOMO_01070 3.7e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JPDEFOMO_01071 3e-265 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JPDEFOMO_01072 5.2e-278 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JPDEFOMO_01073 4.4e-194 yegS 2.7.1.107 G Lipid kinase
JPDEFOMO_01074 8.8e-259 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JPDEFOMO_01075 3.1e-218 yttB EGP Major facilitator Superfamily
JPDEFOMO_01076 5.6e-147 cof S Sucrose-6F-phosphate phosphohydrolase
JPDEFOMO_01077 8.1e-165 S Polyphosphate nucleotide phosphotransferase, PPK2 family
JPDEFOMO_01078 0.0 pepO 3.4.24.71 O Peptidase family M13
JPDEFOMO_01079 5.9e-266 ydiC1 EGP Major facilitator Superfamily
JPDEFOMO_01080 2.2e-81 K Acetyltransferase (GNAT) family
JPDEFOMO_01081 4.3e-166 degV S Uncharacterised protein, DegV family COG1307
JPDEFOMO_01082 1.9e-119 qmcA O prohibitin homologues
JPDEFOMO_01083 5.5e-29
JPDEFOMO_01084 9.9e-140 lys M Glycosyl hydrolases family 25
JPDEFOMO_01085 2.2e-60 S Protein of unknown function (DUF1093)
JPDEFOMO_01086 1.7e-60 S Domain of unknown function (DUF4828)
JPDEFOMO_01087 5e-176 mocA S Oxidoreductase
JPDEFOMO_01088 7.3e-239 yfmL 3.6.4.13 L DEAD DEAH box helicase
JPDEFOMO_01089 3.4e-56 chbA 2.7.1.196, 2.7.1.205 G phosphoenolpyruvate-dependent sugar phosphotransferase system
JPDEFOMO_01090 7.3e-71 S Domain of unknown function (DUF3284)
JPDEFOMO_01092 3.4e-07
JPDEFOMO_01093 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
JPDEFOMO_01094 2.6e-241 pepS E Thermophilic metalloprotease (M29)
JPDEFOMO_01095 9.4e-112 K Bacterial regulatory proteins, tetR family
JPDEFOMO_01096 1e-259 S Uncharacterized protein conserved in bacteria (DUF2252)
JPDEFOMO_01097 6e-180 yihY S Belongs to the UPF0761 family
JPDEFOMO_01098 7.2e-80 fld C Flavodoxin
JPDEFOMO_01099 2.2e-159 map 3.4.11.18 E Methionine Aminopeptidase
JPDEFOMO_01100 1.4e-203 M Glycosyltransferase like family 2
JPDEFOMO_01102 3.1e-14
JPDEFOMO_01103 1.8e-198 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
JPDEFOMO_01104 1.1e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
JPDEFOMO_01106 3.1e-164 eps4I GM Male sterility protein
JPDEFOMO_01107 1.2e-139 S Cell surface protein
JPDEFOMO_01109 2.1e-291 N domain, Protein
JPDEFOMO_01110 4.6e-290 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JPDEFOMO_01111 0.0 bglH 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JPDEFOMO_01112 1.3e-151 licT2 K CAT RNA binding domain
JPDEFOMO_01113 0.0 S Bacterial membrane protein YfhO
JPDEFOMO_01114 0.0 S Psort location CytoplasmicMembrane, score
JPDEFOMO_01115 2.1e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
JPDEFOMO_01116 2.5e-75
JPDEFOMO_01117 6.6e-168 yqjA S Putative aromatic acid exporter C-terminal domain
JPDEFOMO_01118 1.6e-31 cspC K Cold shock protein
JPDEFOMO_01119 4.3e-83 yvbK 3.1.3.25 K GNAT family
JPDEFOMO_01120 1.9e-115 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
JPDEFOMO_01121 5.5e-101 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JPDEFOMO_01122 1.8e-240 pbuX F xanthine permease
JPDEFOMO_01123 6.6e-204 purK2 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JPDEFOMO_01124 1.4e-245 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JPDEFOMO_01125 2.8e-105
JPDEFOMO_01126 1.8e-104
JPDEFOMO_01127 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JPDEFOMO_01128 4.7e-111 vanZ V VanZ like family
JPDEFOMO_01129 2e-152 glcU U sugar transport
JPDEFOMO_01130 5.6e-258 pgi 5.3.1.9 G Belongs to the GPI family
JPDEFOMO_01131 6.5e-226 L Pfam:Integrase_AP2
JPDEFOMO_01132 5.4e-64 S Domain of unknown function DUF1829
JPDEFOMO_01133 1.2e-15
JPDEFOMO_01134 1.6e-31
JPDEFOMO_01135 1.2e-60 S Pyridoxamine 5'-phosphate oxidase
JPDEFOMO_01136 3e-85 S Domain of Unknown Function with PDB structure (DUF3862)
JPDEFOMO_01137 9.5e-71 E Zn peptidase
JPDEFOMO_01138 3.4e-55 3.4.21.88 K Helix-turn-helix domain
JPDEFOMO_01139 4.6e-33 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_01143 1.8e-98
JPDEFOMO_01145 3.9e-15
JPDEFOMO_01148 1.2e-155 recT L RecT family
JPDEFOMO_01149 5.3e-150 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
JPDEFOMO_01150 1.4e-138 L Replication initiation and membrane attachment
JPDEFOMO_01151 4.5e-64 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JPDEFOMO_01152 9.5e-69
JPDEFOMO_01153 1e-55 S Protein of unknown function (DUF1064)
JPDEFOMO_01155 7.4e-28 S Protein of unknown function (DUF1642)
JPDEFOMO_01157 1.4e-16
JPDEFOMO_01159 3.6e-76
JPDEFOMO_01161 5.1e-12
JPDEFOMO_01163 4.9e-218 S GcrA cell cycle regulator
JPDEFOMO_01165 4.7e-43 L transposase activity
JPDEFOMO_01166 1.9e-247 S Terminase-like family
JPDEFOMO_01167 2.2e-255 S Phage portal protein
JPDEFOMO_01168 5e-179 S head morphogenesis protein, SPP1 gp7 family
JPDEFOMO_01171 1.1e-89 S Domain of unknown function (DUF4355)
JPDEFOMO_01172 2.9e-182 gpG
JPDEFOMO_01173 1.8e-60 S Phage gp6-like head-tail connector protein
JPDEFOMO_01174 1.6e-48
JPDEFOMO_01175 4.4e-56 S Bacteriophage HK97-gp10, putative tail-component
JPDEFOMO_01176 8e-67 S Protein of unknown function (DUF3168)
JPDEFOMO_01177 5.2e-97 S Phage tail tube protein
JPDEFOMO_01178 3.6e-49 S Phage tail assembly chaperone protein, TAC
JPDEFOMO_01179 5.3e-58
JPDEFOMO_01180 9.2e-272 S phage tail tape measure protein
JPDEFOMO_01181 9e-297 S Phage tail protein
JPDEFOMO_01182 0.0 S cellulase activity
JPDEFOMO_01183 7.6e-52
JPDEFOMO_01184 4e-44
JPDEFOMO_01185 2e-63 S Bacteriophage holin of superfamily 6 (Holin_LLH)
JPDEFOMO_01186 3.4e-214 M Glycosyl hydrolases family 25
JPDEFOMO_01187 3.2e-144 S Domain of unknown function DUF1829
JPDEFOMO_01188 7.8e-48 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
JPDEFOMO_01190 5.3e-153 F DNA/RNA non-specific endonuclease
JPDEFOMO_01191 1.7e-70 yttA 2.7.13.3 S Pfam Transposase IS66
JPDEFOMO_01192 1.3e-231 wbbX GT2,GT4 M Glycosyl transferases group 1
JPDEFOMO_01193 1e-173 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
JPDEFOMO_01194 5.8e-85 guaD 3.5.4.12, 3.5.4.3, 3.5.4.33 FJ MafB19-like deaminase
JPDEFOMO_01196 4.4e-80 tspO T TspO/MBR family
JPDEFOMO_01197 3.2e-13
JPDEFOMO_01198 4.9e-213 yttB EGP Major facilitator Superfamily
JPDEFOMO_01199 1.4e-104 S Protein of unknown function (DUF1211)
JPDEFOMO_01200 1.2e-285 pipD E Dipeptidase
JPDEFOMO_01202 2.7e-07
JPDEFOMO_01203 2e-129 G Phosphoglycerate mutase family
JPDEFOMO_01204 2.6e-120 K Bacterial regulatory proteins, tetR family
JPDEFOMO_01205 0.0 ycfI V ABC transporter, ATP-binding protein
JPDEFOMO_01206 0.0 yfiC V ABC transporter
JPDEFOMO_01207 1.4e-141 S NADPH-dependent FMN reductase
JPDEFOMO_01208 4.7e-165 1.13.11.2 S glyoxalase
JPDEFOMO_01209 5.4e-197 ampC V Beta-lactamase
JPDEFOMO_01210 1.1e-261 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
JPDEFOMO_01211 3.5e-111 tdk 2.7.1.21 F thymidine kinase
JPDEFOMO_01212 1.9e-176 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JPDEFOMO_01213 2e-152 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JPDEFOMO_01214 7.3e-186 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
JPDEFOMO_01215 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JPDEFOMO_01216 5.7e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JPDEFOMO_01217 6.7e-125 atpB C it plays a direct role in the translocation of protons across the membrane
JPDEFOMO_01218 3.3e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JPDEFOMO_01219 3.1e-41 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JPDEFOMO_01220 1.6e-89 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JPDEFOMO_01221 9.5e-286 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JPDEFOMO_01222 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JPDEFOMO_01223 1.3e-244 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JPDEFOMO_01224 8.3e-70 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
JPDEFOMO_01225 4.2e-31 ywzB S Protein of unknown function (DUF1146)
JPDEFOMO_01226 1.1e-178 mbl D Cell shape determining protein MreB Mrl
JPDEFOMO_01227 2.2e-18 epuA S DNA-directed RNA polymerase subunit beta
JPDEFOMO_01228 9.1e-55 yidD S Could be involved in insertion of integral membrane proteins into the membrane
JPDEFOMO_01229 1.1e-30 S Protein of unknown function (DUF2969)
JPDEFOMO_01230 1.8e-223 rodA D Belongs to the SEDS family
JPDEFOMO_01231 9.5e-49 gcvH E glycine cleavage
JPDEFOMO_01232 4e-223 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
JPDEFOMO_01233 4e-137 P Belongs to the nlpA lipoprotein family
JPDEFOMO_01234 2e-149 P Belongs to the nlpA lipoprotein family
JPDEFOMO_01235 6.1e-191 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JPDEFOMO_01236 2.2e-104 metI P ABC transporter permease
JPDEFOMO_01237 2.9e-142 sufC O FeS assembly ATPase SufC
JPDEFOMO_01238 5e-190 sufD O FeS assembly protein SufD
JPDEFOMO_01239 5.6e-225 csdA 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JPDEFOMO_01240 1e-78 nifU C SUF system FeS assembly protein, NifU family
JPDEFOMO_01241 1.1e-280 sufB O assembly protein SufB
JPDEFOMO_01242 2.7e-22
JPDEFOMO_01243 2.9e-66 yueI S Protein of unknown function (DUF1694)
JPDEFOMO_01244 1.5e-180 S Protein of unknown function (DUF2785)
JPDEFOMO_01245 6.1e-117 yhfA S HAD hydrolase, family IA, variant 3
JPDEFOMO_01246 2.1e-152 2.3.1.19 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_01247 2.9e-82 usp6 T universal stress protein
JPDEFOMO_01248 1.7e-39
JPDEFOMO_01250 6e-241 rarA L recombination factor protein RarA
JPDEFOMO_01251 0.0 gshF 6.3.2.2, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
JPDEFOMO_01252 7.1e-77 yueI S Protein of unknown function (DUF1694)
JPDEFOMO_01253 6.7e-110 yktB S Belongs to the UPF0637 family
JPDEFOMO_01254 2.2e-122 sdaAB 4.3.1.17 E Serine dehydratase beta chain
JPDEFOMO_01255 1.2e-149 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
JPDEFOMO_01256 1.9e-121 G alpha-ribazole phosphatase activity
JPDEFOMO_01257 1.1e-155 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JPDEFOMO_01258 3e-173 IQ NAD dependent epimerase/dehydratase family
JPDEFOMO_01259 1.6e-137 pnuC H nicotinamide mononucleotide transporter
JPDEFOMO_01260 1.4e-133 dck 2.7.1.74 F deoxynucleoside kinase
JPDEFOMO_01261 6.8e-158 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
JPDEFOMO_01262 0.0 oppA E ABC transporter, substratebinding protein
JPDEFOMO_01263 3.4e-158 T GHKL domain
JPDEFOMO_01264 5.6e-121 T Transcriptional regulatory protein, C terminal
JPDEFOMO_01265 1.2e-169 bcrA V AAA domain, putative AbiEii toxin, Type IV TA system
JPDEFOMO_01266 3.1e-99 S ABC-2 family transporter protein
JPDEFOMO_01267 6.3e-154 K Transcriptional regulator
JPDEFOMO_01268 8e-78 yphH S Cupin domain
JPDEFOMO_01269 3.2e-55 yphJ 4.1.1.44 S decarboxylase
JPDEFOMO_01270 3.9e-116 GM NAD(P)H-binding
JPDEFOMO_01271 1.3e-38 cadC1 K helix_turn_helix, Arsenical Resistance Operon Repressor
JPDEFOMO_01273 2.6e-105 gst 2.5.1.18 O Glutathione S-transferase, C-terminal domain
JPDEFOMO_01274 1.6e-114 K Psort location Cytoplasmic, score
JPDEFOMO_01275 7.5e-158 2.3.1.128 K Acetyltransferase (GNAT) domain
JPDEFOMO_01276 1.1e-88 K Acetyltransferase (GNAT) domain
JPDEFOMO_01277 1.7e-154 S Uncharacterised protein, DegV family COG1307
JPDEFOMO_01278 4.2e-104 desR K helix_turn_helix, Lux Regulon
JPDEFOMO_01279 9.2e-206 desK 2.7.13.3 T Histidine kinase
JPDEFOMO_01280 6.5e-134 yvfS V ABC-2 type transporter
JPDEFOMO_01281 2e-158 yvfR V ABC transporter
JPDEFOMO_01282 2.6e-210
JPDEFOMO_01283 4.3e-68 K helix_turn_helix, mercury resistance
JPDEFOMO_01284 9.4e-50 S Protein of unknown function (DUF2568)
JPDEFOMO_01285 1.7e-116 S Protein of unknown function C-terminus (DUF2399)
JPDEFOMO_01286 4.8e-122 K Acetyltransferase (GNAT) domain
JPDEFOMO_01287 3.5e-42 L RelB antitoxin
JPDEFOMO_01288 4e-47 S Bacterial toxin of type II toxin-antitoxin system, YafQ
JPDEFOMO_01290 0.0 yhgF K Tex-like protein N-terminal domain protein
JPDEFOMO_01291 8.2e-176 L Transposase and inactivated derivatives, IS30 family
JPDEFOMO_01292 1e-251 gshR 1.8.1.7 C Glutathione reductase
JPDEFOMO_01293 1.1e-175 proV E ABC transporter, ATP-binding protein
JPDEFOMO_01294 2.3e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
JPDEFOMO_01296 4.2e-30 L Transposase
JPDEFOMO_01297 1.4e-116 L Transposase
JPDEFOMO_01298 3.5e-97 L Transposase
JPDEFOMO_01299 4.7e-164 S helicase activity
JPDEFOMO_01300 1.8e-176 S SIR2-like domain
JPDEFOMO_01301 0.0
JPDEFOMO_01303 1.1e-14 L Belongs to the 'phage' integrase family
JPDEFOMO_01304 4.2e-11 L Transposase IS66 family
JPDEFOMO_01305 6.1e-111 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JPDEFOMO_01306 9.2e-86 ytsP 1.8.4.14 T GAF domain-containing protein
JPDEFOMO_01307 1.5e-276 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JPDEFOMO_01308 3.3e-215 iscS2 2.8.1.7 E Aminotransferase class V
JPDEFOMO_01309 4.6e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JPDEFOMO_01310 4.4e-115 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JPDEFOMO_01311 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JPDEFOMO_01312 4.1e-242 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
JPDEFOMO_01313 4.3e-115 S Haloacid dehalogenase-like hydrolase
JPDEFOMO_01314 2e-118 radC L DNA repair protein
JPDEFOMO_01315 1e-179 mreB D cell shape determining protein MreB
JPDEFOMO_01316 1.9e-150 mreC M Involved in formation and maintenance of cell shape
JPDEFOMO_01317 2.3e-85 mreD M rod shape-determining protein MreD
JPDEFOMO_01318 4.9e-114 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
JPDEFOMO_01319 2.6e-141 minD D Belongs to the ParA family
JPDEFOMO_01320 1.2e-109 artQ P ABC transporter permease
JPDEFOMO_01321 2e-112 glnQ 3.6.3.21 E ABC transporter
JPDEFOMO_01322 1.2e-151 aatB ET ABC transporter substrate-binding protein
JPDEFOMO_01323 3.6e-271 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JPDEFOMO_01324 4.2e-45
JPDEFOMO_01325 9.8e-79 mraZ K Belongs to the MraZ family
JPDEFOMO_01326 1.6e-171 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JPDEFOMO_01327 3.1e-49 ftsL D cell division protein FtsL
JPDEFOMO_01328 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
JPDEFOMO_01329 2e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JPDEFOMO_01330 1.4e-264 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JPDEFOMO_01331 1.8e-201 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JPDEFOMO_01332 1.5e-155 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
JPDEFOMO_01333 2.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
JPDEFOMO_01334 5.9e-225 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JPDEFOMO_01335 8.7e-78 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
JPDEFOMO_01336 2.4e-44 yggT S integral membrane protein
JPDEFOMO_01337 3e-147 ylmH S S4 domain protein
JPDEFOMO_01338 3.9e-86 divIVA D DivIVA protein
JPDEFOMO_01339 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JPDEFOMO_01340 6.9e-36 cspA K Cold shock protein
JPDEFOMO_01341 6.7e-154 pstS P Phosphate
JPDEFOMO_01342 8.7e-265 ydiC1 EGP Major facilitator Superfamily
JPDEFOMO_01343 1.8e-210 yaaN P Toxic anion resistance protein (TelA)
JPDEFOMO_01344 5.3e-116 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
JPDEFOMO_01345 1.4e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
JPDEFOMO_01346 1.2e-28
JPDEFOMO_01347 4.8e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JPDEFOMO_01348 3.4e-219 iscS 2.8.1.7 E Aminotransferase class V
JPDEFOMO_01349 2.9e-57 XK27_04120 S Putative amino acid metabolism
JPDEFOMO_01350 0.0 uvrA2 L ABC transporter
JPDEFOMO_01351 7.2e-256 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
JPDEFOMO_01353 2.6e-123 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
JPDEFOMO_01354 1.8e-116 S Repeat protein
JPDEFOMO_01355 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
JPDEFOMO_01356 1.4e-244 els S Sterol carrier protein domain
JPDEFOMO_01357 5.5e-183 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
JPDEFOMO_01358 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JPDEFOMO_01359 2.9e-31 ykzG S Belongs to the UPF0356 family
JPDEFOMO_01360 9.5e-69
JPDEFOMO_01361 3.9e-47
JPDEFOMO_01362 1.2e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JPDEFOMO_01363 5.2e-89 S E1-E2 ATPase
JPDEFOMO_01364 1.5e-211 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
JPDEFOMO_01365 1.4e-181 pdhB 1.2.4.1, 1.2.4.4 C Transketolase, C-terminal domain protein
JPDEFOMO_01366 2.5e-268 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
JPDEFOMO_01367 3.7e-260 lpdA 1.8.1.4 C Dehydrogenase
JPDEFOMO_01368 2.8e-157 1.1.1.27 C L-malate dehydrogenase activity
JPDEFOMO_01369 2.4e-46 yktA S Belongs to the UPF0223 family
JPDEFOMO_01370 1.3e-145 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
JPDEFOMO_01371 0.0 typA T GTP-binding protein TypA
JPDEFOMO_01372 2.6e-211 ftsW D Belongs to the SEDS family
JPDEFOMO_01373 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JPDEFOMO_01374 2.5e-62 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
JPDEFOMO_01375 5.9e-100 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
JPDEFOMO_01376 5.1e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JPDEFOMO_01377 2.2e-182 ylbL T Belongs to the peptidase S16 family
JPDEFOMO_01378 7.5e-118 comEA L Competence protein ComEA
JPDEFOMO_01379 0.0 comEC S Competence protein ComEC
JPDEFOMO_01380 1e-169 holA 2.7.7.7 L DNA polymerase III delta subunit
JPDEFOMO_01381 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
JPDEFOMO_01382 5.4e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JPDEFOMO_01383 1.8e-50
JPDEFOMO_01384 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JPDEFOMO_01385 2.2e-165 S Tetratricopeptide repeat
JPDEFOMO_01386 2.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JPDEFOMO_01387 0.0 yknV V ABC transporter
JPDEFOMO_01388 7.6e-223 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JPDEFOMO_01389 2.9e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JPDEFOMO_01390 3.1e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
JPDEFOMO_01391 7.8e-48 MA20_27270 S mazG nucleotide pyrophosphohydrolase
JPDEFOMO_01392 1.3e-20
JPDEFOMO_01393 1.5e-259 arpJ P ABC transporter permease
JPDEFOMO_01394 8.2e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JPDEFOMO_01395 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JPDEFOMO_01396 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
JPDEFOMO_01397 6.7e-170 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
JPDEFOMO_01398 6.6e-131 fruR K DeoR C terminal sensor domain
JPDEFOMO_01399 3.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JPDEFOMO_01400 0.0 oatA I Acyltransferase
JPDEFOMO_01401 8.6e-184 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
JPDEFOMO_01402 1e-142 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
JPDEFOMO_01403 8.2e-49 yrvD S Lipopolysaccharide assembly protein A domain
JPDEFOMO_01404 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
JPDEFOMO_01405 3.5e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
JPDEFOMO_01406 2.8e-94 M1-874 K Domain of unknown function (DUF1836)
JPDEFOMO_01407 1.2e-304 cpdB 3.1.3.6, 3.1.4.16 F 5'-nucleotidase, C-terminal domain
JPDEFOMO_01408 1.8e-127
JPDEFOMO_01409 5.7e-18 S Protein of unknown function (DUF2929)
JPDEFOMO_01410 0.0 dnaE 2.7.7.7 L DNA polymerase
JPDEFOMO_01411 7e-178 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
JPDEFOMO_01412 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
JPDEFOMO_01413 1.5e-72 yeaL S Protein of unknown function (DUF441)
JPDEFOMO_01414 4.9e-162 cvfB S S1 domain
JPDEFOMO_01415 4.8e-165 xerD D recombinase XerD
JPDEFOMO_01417 2e-67 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JPDEFOMO_01418 6.8e-125 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JPDEFOMO_01419 5.5e-107 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JPDEFOMO_01420 3.9e-136 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JPDEFOMO_01421 1.2e-95 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JPDEFOMO_01422 3.6e-44 fer C 4Fe-4S single cluster domain of Ferredoxin I
JPDEFOMO_01423 1.3e-182 ypbB 5.1.3.1 S Helix-turn-helix domain
JPDEFOMO_01424 1.7e-265 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
JPDEFOMO_01425 6.1e-66 M Lysin motif
JPDEFOMO_01426 2e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
JPDEFOMO_01427 2.1e-225 rpsA 1.17.7.4 J Ribosomal protein S1
JPDEFOMO_01428 2e-244 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
JPDEFOMO_01429 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JPDEFOMO_01430 1.5e-236 S Tetratricopeptide repeat protein
JPDEFOMO_01431 2.6e-147 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
JPDEFOMO_01432 7.5e-222 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
JPDEFOMO_01433 2.1e-84
JPDEFOMO_01434 0.0 yfmR S ABC transporter, ATP-binding protein
JPDEFOMO_01435 2.1e-190 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JPDEFOMO_01436 5.7e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JPDEFOMO_01437 7.4e-115 hly S protein, hemolysin III
JPDEFOMO_01438 5e-146 DegV S EDD domain protein, DegV family
JPDEFOMO_01439 8.1e-154 ypmR E GDSL-like Lipase/Acylhydrolase
JPDEFOMO_01440 3e-113 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
JPDEFOMO_01441 4.1e-86 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JPDEFOMO_01442 1.1e-39 yozE S Belongs to the UPF0346 family
JPDEFOMO_01443 5.4e-240 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
JPDEFOMO_01444 3e-40
JPDEFOMO_01446 1.6e-191 gap 1.2.1.12 G Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
JPDEFOMO_01447 1.2e-151 K Helix-turn-helix domain
JPDEFOMO_01449 5e-159 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JPDEFOMO_01450 1.7e-139 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JPDEFOMO_01451 3.2e-147 dprA LU DNA protecting protein DprA
JPDEFOMO_01452 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JPDEFOMO_01453 5e-251 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JPDEFOMO_01454 2.1e-168 xerC D Belongs to the 'phage' integrase family. XerC subfamily
JPDEFOMO_01455 7.2e-92 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JPDEFOMO_01456 1.2e-258 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JPDEFOMO_01457 6.2e-173 lacX 5.1.3.3 G Aldose 1-epimerase
JPDEFOMO_01458 3.9e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JPDEFOMO_01459 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JPDEFOMO_01460 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JPDEFOMO_01461 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
JPDEFOMO_01462 3.3e-171 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JPDEFOMO_01463 1.7e-179 K LysR substrate binding domain
JPDEFOMO_01464 1.6e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
JPDEFOMO_01465 1.2e-210 xerS L Belongs to the 'phage' integrase family
JPDEFOMO_01466 8.1e-39
JPDEFOMO_01467 0.0 ysaB V FtsX-like permease family
JPDEFOMO_01468 6.3e-137 XK27_05695 V ABC transporter, ATP-binding protein
JPDEFOMO_01469 3.8e-176 T PhoQ Sensor
JPDEFOMO_01470 7.2e-124 T Transcriptional regulatory protein, C terminal
JPDEFOMO_01471 4.7e-191 EGP Transmembrane secretion effector
JPDEFOMO_01472 3.4e-32 msi198 K Acetyltransferase (GNAT) domain
JPDEFOMO_01473 3.1e-71 K Acetyltransferase (GNAT) domain
JPDEFOMO_01474 3.7e-111 nfnB 1.5.1.34 C Nitroreductase family
JPDEFOMO_01475 3.8e-204 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JPDEFOMO_01476 7.1e-53 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
JPDEFOMO_01477 1.5e-58 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JPDEFOMO_01478 2.7e-132 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
JPDEFOMO_01479 3e-125 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JPDEFOMO_01480 5.2e-113 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JPDEFOMO_01481 1.8e-104 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
JPDEFOMO_01482 3.9e-232 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JPDEFOMO_01483 3.4e-112 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
JPDEFOMO_01484 1.3e-218 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
JPDEFOMO_01485 2.4e-206 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JPDEFOMO_01486 2.6e-100 3.6.1.13 L Belongs to the Nudix hydrolase family
JPDEFOMO_01487 1.7e-159 degV S EDD domain protein, DegV family
JPDEFOMO_01488 0.0 FbpA K Fibronectin-binding protein
JPDEFOMO_01489 1.7e-51 S MazG-like family
JPDEFOMO_01490 3.4e-195 pfoS S Phosphotransferase system, EIIC
JPDEFOMO_01491 6e-174 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JPDEFOMO_01492 5.6e-210 bfmBB 2.3.1.168, 2.3.1.61 C 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
JPDEFOMO_01493 1.4e-181 bfmBAB 1.2.4.1, 1.2.4.4 C Transketolase, pyrimidine binding domain
JPDEFOMO_01494 7.8e-188 bfmBAA 1.2.4.4 C Dehydrogenase E1 component
JPDEFOMO_01495 2.8e-260 lpdA 1.8.1.4 C 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
JPDEFOMO_01496 1e-204 buk 2.7.2.7 C Acetokinase family
JPDEFOMO_01497 1.8e-148 pta 2.3.1.19, 2.3.1.8 C Phosphate acetyl/butaryl transferase
JPDEFOMO_01498 8.1e-114 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JPDEFOMO_01499 9.4e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
JPDEFOMO_01500 8.5e-141 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JPDEFOMO_01501 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
JPDEFOMO_01502 1.3e-209 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
JPDEFOMO_01503 2.5e-239 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JPDEFOMO_01504 3.3e-180 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
JPDEFOMO_01505 2.6e-236 pyrP F Permease
JPDEFOMO_01506 1.7e-96 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JPDEFOMO_01507 1e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JPDEFOMO_01508 4.3e-80 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JPDEFOMO_01509 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
JPDEFOMO_01510 1.3e-45 S Family of unknown function (DUF5322)
JPDEFOMO_01511 1.3e-69 rnhA 3.1.26.4 L Ribonuclease HI
JPDEFOMO_01512 1.3e-110 XK27_02070 S Nitroreductase family
JPDEFOMO_01513 2.6e-280 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JPDEFOMO_01514 1.8e-48
JPDEFOMO_01515 2.7e-274 S Mga helix-turn-helix domain
JPDEFOMO_01516 2e-38 nrdH O Glutaredoxin
JPDEFOMO_01517 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JPDEFOMO_01518 2.4e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JPDEFOMO_01519 2.2e-162 K Transcriptional regulator
JPDEFOMO_01520 0.0 pepO 3.4.24.71 O Peptidase family M13
JPDEFOMO_01521 7.4e-194 lplA 6.3.1.20 H Lipoate-protein ligase
JPDEFOMO_01522 3.9e-34
JPDEFOMO_01523 1.2e-174 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
JPDEFOMO_01524 7.5e-219 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
JPDEFOMO_01525 2.3e-66 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
JPDEFOMO_01526 1.3e-107 ypsA S Belongs to the UPF0398 family
JPDEFOMO_01527 5.1e-121 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
JPDEFOMO_01528 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
JPDEFOMO_01529 4.4e-85 comEB 3.5.4.12 F ComE operon protein 2
JPDEFOMO_01530 2.3e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JPDEFOMO_01531 1.8e-113 dnaD L DnaD domain protein
JPDEFOMO_01532 1.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
JPDEFOMO_01533 3.4e-219 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
JPDEFOMO_01534 7.1e-86 ypmB S Protein conserved in bacteria
JPDEFOMO_01535 1e-11 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
JPDEFOMO_01536 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
JPDEFOMO_01537 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
JPDEFOMO_01538 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
JPDEFOMO_01539 1.7e-168 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
JPDEFOMO_01540 2.1e-180 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
JPDEFOMO_01541 2.2e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
JPDEFOMO_01542 2.1e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
JPDEFOMO_01543 3.6e-174
JPDEFOMO_01544 2.5e-143
JPDEFOMO_01545 8.2e-60 yitW S Iron-sulfur cluster assembly protein
JPDEFOMO_01546 3.5e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
JPDEFOMO_01547 6e-151 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JPDEFOMO_01548 9.2e-127 trmK 2.1.1.217 S SAM-dependent methyltransferase
JPDEFOMO_01549 3.4e-188 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JPDEFOMO_01550 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JPDEFOMO_01551 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
JPDEFOMO_01552 2e-171 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
JPDEFOMO_01553 3.2e-55
JPDEFOMO_01554 6.4e-56
JPDEFOMO_01555 1.1e-141 recO L Involved in DNA repair and RecF pathway recombination
JPDEFOMO_01556 6.6e-170 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JPDEFOMO_01557 8e-64 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
JPDEFOMO_01558 3.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
JPDEFOMO_01559 9.1e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JPDEFOMO_01560 5.9e-180 phoH T phosphate starvation-inducible protein PhoH
JPDEFOMO_01562 6.1e-68 yqeY S YqeY-like protein
JPDEFOMO_01563 2.9e-21 rpsU J Belongs to the bacterial ribosomal protein bS21 family
JPDEFOMO_01564 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
JPDEFOMO_01565 9.7e-166 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JPDEFOMO_01566 7.4e-169 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
JPDEFOMO_01567 2.6e-82 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
JPDEFOMO_01568 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
JPDEFOMO_01569 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
JPDEFOMO_01570 1.7e-35 XK27_04345 3.6.1.1 C Inorganic pyrophosphatase
JPDEFOMO_01571 8.2e-168 1.6.5.5 C nadph quinone reductase
JPDEFOMO_01572 2.1e-76
JPDEFOMO_01573 3e-148 K Helix-turn-helix
JPDEFOMO_01574 9e-281
JPDEFOMO_01575 1.6e-157 V ABC transporter
JPDEFOMO_01576 7.9e-84 FG adenosine 5'-monophosphoramidase activity
JPDEFOMO_01577 2e-244 lytH 3.5.1.28, 6.1.1.12 M N-acetylmuramoyl-L-alanine amidase
JPDEFOMO_01578 2.6e-117 3.1.3.18 J HAD-hyrolase-like
JPDEFOMO_01579 4.2e-77 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JPDEFOMO_01580 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JPDEFOMO_01581 1.3e-43
JPDEFOMO_01582 5.9e-132 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
JPDEFOMO_01583 1.2e-174 prmA J Ribosomal protein L11 methyltransferase
JPDEFOMO_01584 7.7e-88 XK27_03960 S Protein of unknown function (DUF3013)
JPDEFOMO_01585 2.5e-112 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
JPDEFOMO_01586 5.3e-37
JPDEFOMO_01587 3.8e-66 S Protein of unknown function (DUF1093)
JPDEFOMO_01588 8.2e-19
JPDEFOMO_01589 1.2e-48
JPDEFOMO_01590 1.5e-88 XK27_02675 K Acetyltransferase (GNAT) domain
JPDEFOMO_01592 7.8e-111 1.6.5.2 S Flavodoxin-like fold
JPDEFOMO_01593 2.9e-99 K Bacterial regulatory proteins, tetR family
JPDEFOMO_01594 1.4e-155 hutG 3.5.3.8 E N-formylglutamate amidohydrolase
JPDEFOMO_01595 3.6e-54 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
JPDEFOMO_01596 4.5e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JPDEFOMO_01597 5.3e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JPDEFOMO_01598 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
JPDEFOMO_01599 1.8e-57
JPDEFOMO_01600 1.5e-83 6.3.3.2 S ASCH
JPDEFOMO_01601 4.9e-24
JPDEFOMO_01602 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JPDEFOMO_01603 4.3e-52 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_01604 2.1e-142 V ABC transporter transmembrane region
JPDEFOMO_01605 9.3e-193 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JPDEFOMO_01606 9.7e-309 dnaK O Heat shock 70 kDa protein
JPDEFOMO_01607 3.4e-98 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JPDEFOMO_01608 4.2e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JPDEFOMO_01609 2.7e-224 hemN H Involved in the biosynthesis of porphyrin-containing compound
JPDEFOMO_01610 8.5e-176 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
JPDEFOMO_01611 4.9e-165 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JPDEFOMO_01612 1e-142 terC P Integral membrane protein TerC family
JPDEFOMO_01613 4.6e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JPDEFOMO_01614 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JPDEFOMO_01615 6.5e-45 ylxQ J ribosomal protein
JPDEFOMO_01616 1.7e-45 ylxR K Protein of unknown function (DUF448)
JPDEFOMO_01617 4.8e-195 nusA K Participates in both transcription termination and antitermination
JPDEFOMO_01618 1.7e-84 rimP J Required for maturation of 30S ribosomal subunits
JPDEFOMO_01619 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JPDEFOMO_01620 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JPDEFOMO_01621 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
JPDEFOMO_01622 1.2e-138 cdsA 2.7.7.41 S Belongs to the CDS family
JPDEFOMO_01623 1.9e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JPDEFOMO_01624 1.1e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JPDEFOMO_01625 5.9e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
JPDEFOMO_01626 5.3e-156 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JPDEFOMO_01627 3.9e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
JPDEFOMO_01628 1.5e-45 yazA L GIY-YIG catalytic domain protein
JPDEFOMO_01629 3.2e-130 yabB 2.1.1.223 L Methyltransferase small domain
JPDEFOMO_01630 1.3e-122 plsC 2.3.1.51 I Acyltransferase
JPDEFOMO_01631 4.3e-213 yfnA E Amino Acid
JPDEFOMO_01632 6.7e-142 yejC S Protein of unknown function (DUF1003)
JPDEFOMO_01633 0.0 mdlB V ABC transporter
JPDEFOMO_01634 0.0 mdlA V ABC transporter
JPDEFOMO_01635 4.8e-29 yneF S UPF0154 protein
JPDEFOMO_01636 4e-37 ynzC S UPF0291 protein
JPDEFOMO_01637 9.4e-20
JPDEFOMO_01638 2.9e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JPDEFOMO_01639 5.3e-144 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
JPDEFOMO_01640 1.1e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JPDEFOMO_01641 2.2e-38 ylqC S Belongs to the UPF0109 family
JPDEFOMO_01642 1e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
JPDEFOMO_01643 1.1e-230 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JPDEFOMO_01644 3.8e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JPDEFOMO_01646 8.8e-53
JPDEFOMO_01647 4.1e-181 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JPDEFOMO_01648 0.0 smc D Required for chromosome condensation and partitioning
JPDEFOMO_01649 1.7e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JPDEFOMO_01650 3.9e-307 oppA1 E ABC transporter substrate-binding protein
JPDEFOMO_01651 3.1e-135 oppC EP Binding-protein-dependent transport system inner membrane component
JPDEFOMO_01652 9.2e-170 oppB P ABC transporter permease
JPDEFOMO_01653 4.1e-178 oppF P Belongs to the ABC transporter superfamily
JPDEFOMO_01654 5.7e-194 oppD P Belongs to the ABC transporter superfamily
JPDEFOMO_01655 3e-37 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JPDEFOMO_01656 3.4e-186 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
JPDEFOMO_01657 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JPDEFOMO_01658 2.1e-310 yloV S DAK2 domain fusion protein YloV
JPDEFOMO_01659 2.3e-57 asp S Asp23 family, cell envelope-related function
JPDEFOMO_01660 2.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
JPDEFOMO_01661 8.7e-127 thiN 2.7.6.2 H thiamine pyrophosphokinase
JPDEFOMO_01662 3.6e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
JPDEFOMO_01663 3.8e-173 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
JPDEFOMO_01664 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
JPDEFOMO_01665 9.7e-135 stp 3.1.3.16 T phosphatase
JPDEFOMO_01666 2.9e-254 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JPDEFOMO_01667 1.9e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JPDEFOMO_01668 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JPDEFOMO_01669 3.1e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JPDEFOMO_01670 1.3e-35 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
JPDEFOMO_01671 1.9e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
JPDEFOMO_01672 5.5e-92 rssA S Patatin-like phospholipase
JPDEFOMO_01673 1.9e-49
JPDEFOMO_01675 0.0 recN L May be involved in recombinational repair of damaged DNA
JPDEFOMO_01676 4.4e-74 argR K Regulates arginine biosynthesis genes
JPDEFOMO_01677 1.8e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
JPDEFOMO_01678 1.4e-148 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JPDEFOMO_01679 6.2e-32 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JPDEFOMO_01680 8.8e-203 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JPDEFOMO_01681 4.6e-149 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JPDEFOMO_01682 3.1e-66 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JPDEFOMO_01683 2.4e-75 yqhY S Asp23 family, cell envelope-related function
JPDEFOMO_01684 1.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JPDEFOMO_01686 2.7e-202 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
JPDEFOMO_01687 1.7e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
JPDEFOMO_01688 1.1e-56 ysxB J Cysteine protease Prp
JPDEFOMO_01689 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
JPDEFOMO_01690 3.2e-11
JPDEFOMO_01691 5.3e-30
JPDEFOMO_01693 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
JPDEFOMO_01694 5.4e-261 glnA 6.3.1.2 E glutamine synthetase
JPDEFOMO_01695 1e-60 glnR K Transcriptional regulator
JPDEFOMO_01696 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
JPDEFOMO_01697 3.8e-240 ynbB 4.4.1.1 P aluminum resistance
JPDEFOMO_01698 5.4e-175 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JPDEFOMO_01699 9.8e-25 WQ51_02665 S Protein of unknown function (DUF3042)
JPDEFOMO_01700 2.6e-73 yqhL P Rhodanese-like protein
JPDEFOMO_01701 1.8e-178 glk 2.7.1.2 G Glucokinase
JPDEFOMO_01702 6.2e-41 yqgQ S Bacterial protein of unknown function (DUF910)
JPDEFOMO_01703 2.5e-121 gluP 3.4.21.105 S Peptidase, S54 family
JPDEFOMO_01704 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
JPDEFOMO_01705 0.0 S Bacterial membrane protein YfhO
JPDEFOMO_01706 2.9e-53 yneR S Belongs to the HesB IscA family
JPDEFOMO_01707 6.9e-116 vraR K helix_turn_helix, Lux Regulon
JPDEFOMO_01708 5.7e-181 vraS 2.7.13.3 T Histidine kinase
JPDEFOMO_01709 8.3e-120 yvqF S Cell wall-active antibiotics response 4TMS YvqF
JPDEFOMO_01710 1.2e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JPDEFOMO_01711 4.7e-114 udk 2.7.1.48 F Cytidine monophosphokinase
JPDEFOMO_01712 3.1e-207 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JPDEFOMO_01713 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JPDEFOMO_01714 4.4e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JPDEFOMO_01715 6.3e-66 yodB K Transcriptional regulator, HxlR family
JPDEFOMO_01716 7.3e-94 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
JPDEFOMO_01717 5.1e-139 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JPDEFOMO_01718 1.9e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
JPDEFOMO_01719 6.4e-174 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JPDEFOMO_01720 8.6e-290 arlS 2.7.13.3 T Histidine kinase
JPDEFOMO_01721 7.9e-123 K response regulator
JPDEFOMO_01722 5.7e-269 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JPDEFOMO_01723 3e-39 yhcX S Psort location Cytoplasmic, score
JPDEFOMO_01724 4.1e-98 yceD S Uncharacterized ACR, COG1399
JPDEFOMO_01725 1.3e-210 ylbM S Belongs to the UPF0348 family
JPDEFOMO_01726 2.9e-139 yccK Q ubiE/COQ5 methyltransferase family
JPDEFOMO_01727 1.9e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JPDEFOMO_01728 5.6e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
JPDEFOMO_01729 2.7e-131 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JPDEFOMO_01730 3.8e-48 yhbY J RNA-binding protein
JPDEFOMO_01731 1.4e-206 yqeH S Ribosome biogenesis GTPase YqeH
JPDEFOMO_01732 2.9e-96 yqeG S HAD phosphatase, family IIIA
JPDEFOMO_01733 1.4e-172 ykcA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JPDEFOMO_01734 8.1e-190 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JPDEFOMO_01735 1.3e-122 mhqD S Dienelactone hydrolase family
JPDEFOMO_01736 2.1e-182 3.5.1.10 C Alcohol dehydrogenase GroES-like domain
JPDEFOMO_01737 1.1e-98 yvdD 3.2.2.10 S Belongs to the LOG family
JPDEFOMO_01738 8.7e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JPDEFOMO_01739 9e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
JPDEFOMO_01740 1.5e-77 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JPDEFOMO_01741 8.8e-130 S SseB protein N-terminal domain
JPDEFOMO_01742 1.6e-53
JPDEFOMO_01743 8e-105 yrgI 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
JPDEFOMO_01744 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JPDEFOMO_01746 1.2e-171 dnaI L Primosomal protein DnaI
JPDEFOMO_01747 8.7e-251 dnaB L replication initiation and membrane attachment
JPDEFOMO_01748 1.2e-79 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JPDEFOMO_01749 9.7e-101 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JPDEFOMO_01750 6.9e-161 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
JPDEFOMO_01751 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JPDEFOMO_01752 3.4e-121 ybhL S Inhibitor of apoptosis-promoting Bax1
JPDEFOMO_01753 4.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
JPDEFOMO_01754 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
JPDEFOMO_01755 1.1e-115 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JPDEFOMO_01756 1.5e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
JPDEFOMO_01758 1.8e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JPDEFOMO_01759 1e-147 ytmP 2.7.1.89 M Choline/ethanolamine kinase
JPDEFOMO_01760 7.9e-219 ecsB U ABC transporter
JPDEFOMO_01761 3.1e-133 ecsA V ABC transporter, ATP-binding protein
JPDEFOMO_01762 1.6e-76 hit FG histidine triad
JPDEFOMO_01763 3.2e-62 yhaH S YtxH-like protein
JPDEFOMO_01764 8.1e-160 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
JPDEFOMO_01765 1.4e-181 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
JPDEFOMO_01766 1e-54 yheA S Control of competence regulator ComK, YlbF/YmcA
JPDEFOMO_01767 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JPDEFOMO_01768 1.6e-154 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JPDEFOMO_01769 5.3e-75 argR K Regulates arginine biosynthesis genes
JPDEFOMO_01770 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
JPDEFOMO_01772 1.2e-67
JPDEFOMO_01773 1.2e-22
JPDEFOMO_01774 5.2e-178 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
JPDEFOMO_01775 0.0 glpQ 3.1.4.46 C phosphodiesterase
JPDEFOMO_01776 5.1e-122 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
JPDEFOMO_01777 3.2e-68 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JPDEFOMO_01778 5.4e-138 yhfI S Metallo-beta-lactamase superfamily
JPDEFOMO_01779 4.8e-93 traP 1.14.99.57, 6.2.1.3 S heme oxygenase (decyclizing) activity
JPDEFOMO_01780 0.0 V ABC transporter (permease)
JPDEFOMO_01781 3.3e-138 bceA V ABC transporter
JPDEFOMO_01782 5.9e-123 K response regulator
JPDEFOMO_01783 2.6e-208 T PhoQ Sensor
JPDEFOMO_01784 6.4e-110 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JPDEFOMO_01785 0.0 copB 3.6.3.4 P P-type ATPase
JPDEFOMO_01786 2.3e-75 copR K Copper transport repressor CopY TcrY
JPDEFOMO_01787 5.6e-236 purD 6.3.4.13 F Belongs to the GARS family
JPDEFOMO_01788 1.8e-289 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
JPDEFOMO_01789 4.5e-100 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JPDEFOMO_01790 2.3e-187 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
JPDEFOMO_01791 2e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JPDEFOMO_01792 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JPDEFOMO_01793 2.7e-131 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JPDEFOMO_01794 1.3e-41 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JPDEFOMO_01795 8e-134 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
JPDEFOMO_01796 7.8e-213 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JPDEFOMO_01797 3.2e-78 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JPDEFOMO_01798 2.1e-103 thiT S Thiamine transporter protein (Thia_YuaJ)
JPDEFOMO_01799 5.9e-258 iolT EGP Major facilitator Superfamily
JPDEFOMO_01800 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JPDEFOMO_01801 2.7e-39 ptsH G phosphocarrier protein HPR
JPDEFOMO_01802 2e-28
JPDEFOMO_01803 0.0 clpE O Belongs to the ClpA ClpB family
JPDEFOMO_01804 2.8e-45 XK27_09445 S Domain of unknown function (DUF1827)
JPDEFOMO_01806 1.3e-306 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JPDEFOMO_01807 4.9e-246 hlyX S Transporter associated domain
JPDEFOMO_01808 4.1e-196 yueF S AI-2E family transporter
JPDEFOMO_01809 1.6e-73 S Acetyltransferase (GNAT) domain
JPDEFOMO_01810 1.8e-95
JPDEFOMO_01811 2.2e-104 ygaC J Belongs to the UPF0374 family
JPDEFOMO_01812 6.1e-143 recX 2.4.1.337 GT4 S Regulatory protein RecX
JPDEFOMO_01813 2.1e-293 frvR K transcriptional antiterminator
JPDEFOMO_01814 2.9e-63
JPDEFOMO_01815 1.6e-252 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JPDEFOMO_01816 2.8e-79 F Nucleoside 2-deoxyribosyltransferase
JPDEFOMO_01817 1.8e-133 K UTRA
JPDEFOMO_01818 3.5e-290 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JPDEFOMO_01819 3.2e-253 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JPDEFOMO_01820 1.9e-82
JPDEFOMO_01821 5.4e-50 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
JPDEFOMO_01822 6.9e-50 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_01823 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
JPDEFOMO_01824 4.5e-219 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
JPDEFOMO_01825 1.9e-202 mvaA 1.1.1.34, 1.1.1.88 C Belongs to the HMG-CoA reductase family
JPDEFOMO_01826 4.2e-209 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
JPDEFOMO_01827 1.6e-48
JPDEFOMO_01828 1.1e-160 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
JPDEFOMO_01829 2.2e-102 V Restriction endonuclease
JPDEFOMO_01830 2.6e-157 5.1.3.3 G converts alpha-aldose to the beta-anomer
JPDEFOMO_01831 6.1e-213 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
JPDEFOMO_01832 1e-102 S ECF transporter, substrate-specific component
JPDEFOMO_01834 7.3e-80 yodP 2.3.1.264 K Acetyltransferase GNAT Family
JPDEFOMO_01835 1.1e-85 ydcK S Belongs to the SprT family
JPDEFOMO_01836 1.9e-130 XK27_08845 S ABC transporter, ATP-binding protein
JPDEFOMO_01837 4.2e-140 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
JPDEFOMO_01838 1.7e-155 XK27_08835 S ABC transporter
JPDEFOMO_01839 8.1e-73
JPDEFOMO_01840 0.0 pacL 3.6.3.8 P P-type ATPase
JPDEFOMO_01841 3.2e-217 V Beta-lactamase
JPDEFOMO_01842 5.7e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
JPDEFOMO_01843 1.6e-219 V Beta-lactamase
JPDEFOMO_01844 2.5e-275 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JPDEFOMO_01845 5e-125 gntR1 K UbiC transcription regulator-associated domain protein
JPDEFOMO_01846 1.3e-218 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
JPDEFOMO_01847 1.7e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JPDEFOMO_01848 0.0 yuxL 3.4.19.1 E Prolyl oligopeptidase family
JPDEFOMO_01851 2.5e-160 yjjH S Calcineurin-like phosphoesterase
JPDEFOMO_01852 1.6e-266 dtpT U amino acid peptide transporter
JPDEFOMO_01853 0.0 macB_3 V ABC transporter, ATP-binding protein
JPDEFOMO_01854 1.1e-65
JPDEFOMO_01855 3.4e-76 S function, without similarity to other proteins
JPDEFOMO_01856 1.9e-264 G MFS/sugar transport protein
JPDEFOMO_01857 3.1e-233 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
JPDEFOMO_01858 5.4e-58
JPDEFOMO_01859 0.0 pckG 4.1.1.32, 4.1.1.49 C Phosphoenolpyruvate carboxykinase
JPDEFOMO_01860 1.4e-17 S Virus attachment protein p12 family
JPDEFOMO_01861 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
JPDEFOMO_01862 9.9e-42 feoA P FeoA
JPDEFOMO_01863 2.3e-43 E lipolytic protein G-D-S-L family
JPDEFOMO_01864 3.6e-54 E lipolytic protein G-D-S-L family
JPDEFOMO_01867 2.1e-117 ywnB S NAD(P)H-binding
JPDEFOMO_01868 9.9e-62 S MucBP domain
JPDEFOMO_01869 1.2e-62
JPDEFOMO_01871 2.3e-224 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JPDEFOMO_01872 4.7e-304 frvR K Mga helix-turn-helix domain
JPDEFOMO_01873 1.8e-19 frvR K Mga helix-turn-helix domain
JPDEFOMO_01874 2.4e-264 frvR K Mga helix-turn-helix domain
JPDEFOMO_01875 2.3e-265 lysP E amino acid
JPDEFOMO_01877 1.6e-131 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
JPDEFOMO_01878 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
JPDEFOMO_01879 1.6e-97
JPDEFOMO_01880 6.7e-98 2.3.1.128 J Acetyltransferase (GNAT) domain
JPDEFOMO_01881 5.2e-195 S Protein of unknown function C-terminal (DUF3324)
JPDEFOMO_01882 1.2e-87
JPDEFOMO_01883 2e-18 rpmG J Belongs to the bacterial ribosomal protein bL33 family
JPDEFOMO_01884 4e-118 sodA 1.15.1.1 C Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JPDEFOMO_01885 3.4e-163 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
JPDEFOMO_01886 8.9e-158 I alpha/beta hydrolase fold
JPDEFOMO_01887 3.3e-29
JPDEFOMO_01888 9.3e-74
JPDEFOMO_01889 2.8e-154 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
JPDEFOMO_01890 1.1e-124 citR K FCD
JPDEFOMO_01891 1.5e-266 oadA 2.1.3.1, 4.1.1.3, 6.4.1.1, 6.4.1.7 C Conserved carboxylase domain
JPDEFOMO_01892 2.1e-94 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
JPDEFOMO_01893 5.9e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
JPDEFOMO_01894 9e-156 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
JPDEFOMO_01895 1.3e-48 citD C Covalent carrier of the coenzyme of citrate lyase
JPDEFOMO_01896 4.2e-181 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
JPDEFOMO_01898 7.9e-197 oadB 4.1.1.3 C Na+-transporting oxaloacetate decarboxylase beta subunit
JPDEFOMO_01899 6.7e-42 gcdC 2.3.1.12 I Biotin-requiring enzyme
JPDEFOMO_01900 4.5e-52
JPDEFOMO_01901 4.8e-241 citM C Citrate transporter
JPDEFOMO_01902 2.8e-41
JPDEFOMO_01903 5.1e-104 kptA J Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
JPDEFOMO_01904 1.6e-88 K GNAT family
JPDEFOMO_01905 2.9e-108 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
JPDEFOMO_01906 9.7e-58 K Transcriptional regulator PadR-like family
JPDEFOMO_01907 1.9e-150 ORF00048
JPDEFOMO_01908 2.8e-137 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
JPDEFOMO_01909 1.5e-169 yjjC V ABC transporter
JPDEFOMO_01910 4.3e-289 M Exporter of polyketide antibiotics
JPDEFOMO_01911 4.3e-115 K Transcriptional regulator
JPDEFOMO_01912 3.3e-261 EGP Major facilitator Superfamily
JPDEFOMO_01913 1.6e-126 S membrane transporter protein
JPDEFOMO_01914 2.9e-85 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_01915 1.3e-85 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_01916 4e-161 S Alpha beta hydrolase
JPDEFOMO_01917 2.1e-61 yvoA_1 K Transcriptional regulator, GntR family
JPDEFOMO_01918 4.6e-126 skfE V ATPases associated with a variety of cellular activities
JPDEFOMO_01919 1.4e-21
JPDEFOMO_01920 5.6e-103 ydaF J Acetyltransferase (GNAT) domain
JPDEFOMO_01921 4.2e-161 oppF P Oligopeptide/dipeptide transporter, C-terminal region
JPDEFOMO_01922 2.5e-206 oppD P Oligopeptide/dipeptide transporter, C-terminal region
JPDEFOMO_01923 8.5e-24
JPDEFOMO_01924 6.5e-179 amiD EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
JPDEFOMO_01925 1e-168 oppB P Binding-protein-dependent transport system inner membrane component
JPDEFOMO_01926 3e-293 E Bacterial extracellular solute-binding proteins, family 5 Middle
JPDEFOMO_01927 6.2e-128 hchA S DJ-1/PfpI family
JPDEFOMO_01928 4.6e-52 K Transcriptional
JPDEFOMO_01929 1e-38
JPDEFOMO_01930 6.2e-267 V ABC transporter transmembrane region
JPDEFOMO_01931 5.1e-290 V ABC transporter transmembrane region
JPDEFOMO_01933 3.2e-68 S Iron-sulphur cluster biosynthesis
JPDEFOMO_01934 1e-15 2.7.1.39 S Phosphotransferase enzyme family
JPDEFOMO_01935 2.9e-261 lytN 3.5.1.104 M LysM domain
JPDEFOMO_01936 1.5e-135 zmp3 O Zinc-dependent metalloprotease
JPDEFOMO_01937 5.9e-135 repA K DeoR C terminal sensor domain
JPDEFOMO_01939 5.6e-50 lciIC K Helix-turn-helix XRE-family like proteins
JPDEFOMO_01940 3.7e-90 yjdB S Domain of unknown function (DUF4767)
JPDEFOMO_01941 4.7e-73 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JPDEFOMO_01942 3.8e-75 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JPDEFOMO_01943 9.7e-115
JPDEFOMO_01944 4.4e-75 S Protein of unknown function DUF262
JPDEFOMO_01945 2e-22 pstIR 2.1.1.72, 3.1.21.4 L BsuBI/PstI restriction endonuclease C-terminus
JPDEFOMO_01947 2.8e-135 L Eco57I restriction-modification methylase
JPDEFOMO_01949 1.9e-159 L Belongs to the 'phage' integrase family
JPDEFOMO_01950 9.3e-11 S Domain of unknown function (DUF3173)
JPDEFOMO_01951 1.1e-80 K Replication initiation factor
JPDEFOMO_01952 3.8e-173 tra L Transposase and inactivated derivatives, IS30 family
JPDEFOMO_01953 2.3e-95 repE K Primase C terminal 1 (PriCT-1)
JPDEFOMO_01954 4.7e-91 soj D AAA domain
JPDEFOMO_01955 3.6e-20
JPDEFOMO_01956 6.4e-146 L Transposase
JPDEFOMO_01961 8.9e-28 3.1.1.32, 3.1.1.4 S COG0790 FOG TPR repeat, SEL1 subfamily
JPDEFOMO_01962 5.9e-175 3.1.1.32, 3.1.1.4 S COG0790 FOG TPR repeat, SEL1 subfamily
JPDEFOMO_01964 0.0 L Protein of unknown function (DUF3991)
JPDEFOMO_01966 5.7e-08 S Putative Holin-like Toxin (Hol-Tox)
JPDEFOMO_01967 9.5e-65
JPDEFOMO_01968 3.9e-16
JPDEFOMO_01969 7e-80
JPDEFOMO_01971 2.1e-76
JPDEFOMO_01972 2.7e-78 L COG3547 Transposase and inactivated derivatives
JPDEFOMO_01973 2.5e-145 F DNA/RNA non-specific endonuclease
JPDEFOMO_01975 9.2e-43 tnp2PF3 L Transposase DDE domain
JPDEFOMO_01976 1.2e-47 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
JPDEFOMO_01977 1.6e-17 tra L Transposase and inactivated derivatives, IS30 family
JPDEFOMO_01978 5.6e-182 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
JPDEFOMO_01979 3e-45 K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JPDEFOMO_01981 1.6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
JPDEFOMO_01982 3e-178 coaA 2.7.1.33 F Pantothenic acid kinase
JPDEFOMO_01983 3e-12
JPDEFOMO_01984 1.6e-24
JPDEFOMO_01985 7.4e-277 pipD E Dipeptidase
JPDEFOMO_01986 3.8e-84 ykhA 3.1.2.20 I Thioesterase superfamily
JPDEFOMO_01987 0.0 helD 3.6.4.12 L DNA helicase
JPDEFOMO_01988 3.5e-20
JPDEFOMO_01989 0.0 yjbQ P TrkA C-terminal domain protein
JPDEFOMO_01990 1.1e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
JPDEFOMO_01991 1e-81 yjhE S Phage tail protein
JPDEFOMO_01992 1.3e-241 mntH P H( )-stimulated, divalent metal cation uptake system
JPDEFOMO_01993 1.5e-188 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
JPDEFOMO_01994 3.5e-128 pgm3 G Phosphoglycerate mutase family
JPDEFOMO_01995 0.0 V FtsX-like permease family
JPDEFOMO_01996 2.6e-135 cysA V ABC transporter, ATP-binding protein
JPDEFOMO_01997 0.0 E amino acid
JPDEFOMO_01998 5.3e-164 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
JPDEFOMO_01999 1.6e-238 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JPDEFOMO_02000 2.6e-159 nodB3 G Polysaccharide deacetylase
JPDEFOMO_02001 2.9e-143 S Glucosyl transferase GtrII
JPDEFOMO_02002 3.2e-110 S Glucosyl transferase GtrII
JPDEFOMO_02003 6.5e-225
JPDEFOMO_02004 2e-94
JPDEFOMO_02005 1.8e-174 3.1.4.46 M Peptidase_C39 like family
JPDEFOMO_02006 1.2e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
JPDEFOMO_02007 3e-203 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
JPDEFOMO_02008 6e-108 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
JPDEFOMO_02009 2.6e-163 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JPDEFOMO_02011 2.8e-122
JPDEFOMO_02012 4.1e-259 wcaJ M Bacterial sugar transferase
JPDEFOMO_02013 3.2e-175 cps2D 5.1.3.2 M RmlD substrate binding domain
JPDEFOMO_02014 3.3e-110 glnP P ABC transporter permease
JPDEFOMO_02015 4.6e-109 gluC P ABC transporter permease
JPDEFOMO_02016 4.5e-149 glnH ET ABC transporter substrate-binding protein
JPDEFOMO_02017 7.4e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JPDEFOMO_02018 8.5e-179
JPDEFOMO_02020 6.1e-84 zur P Belongs to the Fur family
JPDEFOMO_02021 2.2e-09
JPDEFOMO_02022 1e-110 gmk2 2.7.4.8 F Guanylate kinase
JPDEFOMO_02023 9.2e-71 GnaT 2.5.1.16 K Acetyltransferase (GNAT) domain
JPDEFOMO_02024 8.4e-128 spl M NlpC/P60 family
JPDEFOMO_02025 1.2e-244 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JPDEFOMO_02026 3.3e-172 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JPDEFOMO_02027 2.9e-54 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
JPDEFOMO_02028 4.6e-174 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JPDEFOMO_02029 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
JPDEFOMO_02030 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
JPDEFOMO_02031 3.4e-285 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
JPDEFOMO_02032 3.2e-201 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
JPDEFOMO_02033 3.6e-197 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JPDEFOMO_02034 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JPDEFOMO_02035 1.2e-204 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
JPDEFOMO_02036 3.1e-103 ylcC 3.4.22.70 M Sortase family
JPDEFOMO_02037 6.1e-146 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
JPDEFOMO_02038 0.0 fbp 3.1.3.11 G phosphatase activity
JPDEFOMO_02039 2.6e-65 nrp 1.20.4.1 P ArsC family
JPDEFOMO_02040 0.0 clpL O associated with various cellular activities
JPDEFOMO_02041 9e-144 ywqE 3.1.3.48 GM PHP domain protein
JPDEFOMO_02042 3.4e-150 brpA K Cell envelope-like function transcriptional attenuator common domain protein
JPDEFOMO_02043 3.2e-158 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
JPDEFOMO_02044 1.2e-199 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
JPDEFOMO_02045 6e-108 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
JPDEFOMO_02046 1.2e-160 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JPDEFOMO_02047 1.9e-37 L Transposase and inactivated derivatives
JPDEFOMO_02048 1.7e-102 L Integrase core domain
JPDEFOMO_02049 3.8e-173 L Belongs to the 'phage' integrase family
JPDEFOMO_02050 6.4e-72 3.1.21.3 V type I restriction modification DNA specificity domain protein
JPDEFOMO_02051 8.3e-200 hsdM 2.1.1.72 V type I restriction-modification system
JPDEFOMO_02052 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
JPDEFOMO_02053 4.6e-76
JPDEFOMO_02054 8.3e-213 ykiI
JPDEFOMO_02055 0.0 scrA 2.7.1.211 G phosphotransferase system
JPDEFOMO_02056 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
JPDEFOMO_02057 1.6e-180 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
JPDEFOMO_02058 9.7e-304 scrB 3.2.1.26 GH32 G invertase
JPDEFOMO_02059 9.9e-163 azoB GM NmrA-like family
JPDEFOMO_02060 8.5e-234 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
JPDEFOMO_02061 7.7e-143 accA 2.1.3.15, 6.4.1.2 I alpha subunit
JPDEFOMO_02062 1.8e-150 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JPDEFOMO_02063 9.1e-256 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
JPDEFOMO_02064 3.9e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
JPDEFOMO_02065 8.6e-62 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
JPDEFOMO_02066 1.4e-223 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
JPDEFOMO_02067 4.7e-126 IQ reductase
JPDEFOMO_02068 4.2e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
JPDEFOMO_02069 2.4e-173 fabK 1.3.1.9 S Nitronate monooxygenase
JPDEFOMO_02070 1.2e-33 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JPDEFOMO_02071 5.9e-177 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JPDEFOMO_02072 6.2e-76 marR K Winged helix DNA-binding domain
JPDEFOMO_02073 5.3e-72 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
JPDEFOMO_02074 3.5e-193 bioH 2.1.1.197, 3.1.1.85, 3.7.1.13, 3.7.1.9, 4.2.99.20 E Alpha/beta hydrolase family
JPDEFOMO_02075 1.9e-225 bdhA C Iron-containing alcohol dehydrogenase
JPDEFOMO_02076 2.1e-48 S Uncharacterized protein conserved in bacteria (DUF2316)
JPDEFOMO_02077 1.4e-66 K MarR family
JPDEFOMO_02078 1.3e-12 S response to antibiotic
JPDEFOMO_02079 8.2e-161 S Putative esterase
JPDEFOMO_02080 5.3e-198
JPDEFOMO_02081 2.7e-103 rmaB K Transcriptional regulator, MarR family
JPDEFOMO_02082 0.0 lmrA 3.6.3.44 V ABC transporter
JPDEFOMO_02083 1.2e-82 F NUDIX domain
JPDEFOMO_02084 3.9e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JPDEFOMO_02085 3.4e-21
JPDEFOMO_02086 4.5e-117 S zinc-ribbon domain
JPDEFOMO_02087 1.1e-203 pbpX1 V Beta-lactamase
JPDEFOMO_02088 7.1e-187 K AI-2E family transporter
JPDEFOMO_02089 1.3e-128 srtA 3.4.22.70 M Sortase family
JPDEFOMO_02090 7.6e-65 gtcA S Teichoic acid glycosylation protein
JPDEFOMO_02091 3.6e-171 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
JPDEFOMO_02092 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
JPDEFOMO_02093 8.9e-167 gbuC E glycine betaine
JPDEFOMO_02094 1.1e-147 proW E glycine betaine
JPDEFOMO_02095 1.3e-221 gbuA 3.6.3.32 E glycine betaine
JPDEFOMO_02096 9.2e-138 sfsA S Belongs to the SfsA family
JPDEFOMO_02097 1.8e-67 usp1 T Universal stress protein family
JPDEFOMO_02098 3.5e-252 yxbA 6.3.1.12 S ATP-grasp enzyme
JPDEFOMO_02099 9.1e-132 thrB 2.7.1.39, 4.2.3.1 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
JPDEFOMO_02100 1e-284 thrC 4.2.3.1 E Threonine synthase
JPDEFOMO_02101 4.6e-227 hom 1.1.1.3 E homoserine dehydrogenase
JPDEFOMO_02102 3e-251 yclM 2.7.2.4 E Belongs to the aspartokinase family
JPDEFOMO_02103 6.2e-26 yqiK S SPFH domain / Band 7 family
JPDEFOMO_02104 6.6e-123 yqiK S SPFH domain / Band 7 family
JPDEFOMO_02105 1.9e-34
JPDEFOMO_02106 2.5e-173 pfoS S Phosphotransferase system, EIIC
JPDEFOMO_02107 5.5e-178 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JPDEFOMO_02108 1.6e-216 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
JPDEFOMO_02109 1.4e-50
JPDEFOMO_02110 5.4e-127 WQ51_05710 S Mitochondrial biogenesis AIM24
JPDEFOMO_02111 3e-71 FG Scavenger mRNA decapping enzyme C-term binding
JPDEFOMO_02112 0.0 asnB 6.3.5.4 E Asparagine synthase
JPDEFOMO_02113 8.7e-42 K negative regulation of transcription, DNA-templated
JPDEFOMO_02114 3.3e-122 norB P Major Facilitator Superfamily
JPDEFOMO_02115 3.2e-203 S Calcineurin-like phosphoesterase
JPDEFOMO_02116 5.7e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
JPDEFOMO_02117 1e-176 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JPDEFOMO_02118 1.4e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JPDEFOMO_02119 2.2e-165 natA S abc transporter atp-binding protein
JPDEFOMO_02120 2.2e-219 ysdA CP ABC-2 family transporter protein
JPDEFOMO_02121 9.6e-65 K helix_turn_helix gluconate operon transcriptional repressor
JPDEFOMO_02122 3.4e-163 CcmA V ABC transporter
JPDEFOMO_02123 1.1e-110 I ABC-2 family transporter protein
JPDEFOMO_02124 9.9e-146 IQ reductase
JPDEFOMO_02125 4e-201 ald 1.4.1.1 C Belongs to the AlaDH PNT family
JPDEFOMO_02126 1.5e-186 tdcB 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JPDEFOMO_02127 2.3e-297 S OPT oligopeptide transporter protein
JPDEFOMO_02128 4e-62 S Coenzyme PQQ synthesis protein D (PqqD)
JPDEFOMO_02129 1.2e-282 pipD E Dipeptidase
JPDEFOMO_02130 1.8e-256 gor 1.8.1.7 C Glutathione reductase
JPDEFOMO_02131 3.3e-248 lmrB EGP Major facilitator Superfamily
JPDEFOMO_02132 3.6e-97 yxaF K Bacterial regulatory proteins, tetR family
JPDEFOMO_02133 8.9e-294 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JPDEFOMO_02134 0.0 bglP 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JPDEFOMO_02135 1.7e-134 licT K CAT RNA binding domain
JPDEFOMO_02136 6.1e-291 cydC V ABC transporter transmembrane region
JPDEFOMO_02137 0.0 cydD CO ABC transporter transmembrane region
JPDEFOMO_02138 7.1e-74 S NusG domain II
JPDEFOMO_02139 1.5e-155 M Peptidoglycan-binding domain 1 protein
JPDEFOMO_02140 3.3e-141
JPDEFOMO_02141 5.9e-216 ywhK S Membrane
JPDEFOMO_02142 3.8e-63 S Protein of unknown function (DUF1093)
JPDEFOMO_02143 4.2e-50 yvlA
JPDEFOMO_02144 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JPDEFOMO_02145 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
JPDEFOMO_02146 1.7e-182 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
JPDEFOMO_02147 2.3e-278 cydA 1.10.3.14 C ubiquinol oxidase
JPDEFOMO_02149 3.4e-236 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
JPDEFOMO_02150 5e-190 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JPDEFOMO_02151 8.6e-40
JPDEFOMO_02152 5.5e-86
JPDEFOMO_02153 8e-24
JPDEFOMO_02154 2e-166 yicL EG EamA-like transporter family
JPDEFOMO_02155 1.1e-110 tag 3.2.2.20 L glycosylase
JPDEFOMO_02156 5e-78 usp5 T universal stress protein
JPDEFOMO_02157 1.8e-55 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_02158 2.9e-145 ptp3 3.1.3.48 T Tyrosine phosphatase family
JPDEFOMO_02159 3.1e-225 queG 1.17.99.6 C Domain of unknown function (DUF1730)
JPDEFOMO_02160 1.7e-63
JPDEFOMO_02161 2.7e-86 bioY S BioY family
JPDEFOMO_02162 3.5e-70 adhR K helix_turn_helix, mercury resistance
JPDEFOMO_02163 8.5e-84 C Flavodoxin
JPDEFOMO_02164 1.3e-198 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
JPDEFOMO_02165 2e-115 GM NmrA-like family
JPDEFOMO_02167 1.8e-101 Q methyltransferase
JPDEFOMO_02168 3.4e-93 T Sh3 type 3 domain protein
JPDEFOMO_02169 6.2e-119 yfeJ 6.3.5.2 F glutamine amidotransferase
JPDEFOMO_02170 4.4e-135 S Uncharacterized protein conserved in bacteria (DUF2263)
JPDEFOMO_02171 5.3e-259 yhdP S Transporter associated domain
JPDEFOMO_02172 2.7e-258 lmrB EGP Major facilitator Superfamily
JPDEFOMO_02173 1.6e-61 S Domain of unknown function (DUF4811)
JPDEFOMO_02174 9.9e-100 maf D nucleoside-triphosphate diphosphatase activity
JPDEFOMO_02175 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JPDEFOMO_02176 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JPDEFOMO_02177 0.0 ydaO E amino acid
JPDEFOMO_02178 2.4e-56 S Domain of unknown function (DUF1827)
JPDEFOMO_02179 1e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JPDEFOMO_02180 6.7e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JPDEFOMO_02181 5e-111 S CAAX protease self-immunity
JPDEFOMO_02182 8.2e-196 brpA K Cell envelope-like function transcriptional attenuator common domain protein
JPDEFOMO_02183 3.1e-185
JPDEFOMO_02184 2.7e-61 ytrA K helix_turn_helix gluconate operon transcriptional repressor
JPDEFOMO_02185 7.2e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JPDEFOMO_02186 0.0 uup S ABC transporter, ATP-binding protein
JPDEFOMO_02187 3.9e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_02188 4.2e-189 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JPDEFOMO_02189 2.1e-99 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
JPDEFOMO_02190 5.3e-130 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
JPDEFOMO_02191 1e-73
JPDEFOMO_02192 3.3e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
JPDEFOMO_02193 5.3e-181 ansA 3.5.1.1 EJ Asparaginase
JPDEFOMO_02194 3.9e-144 fat 3.1.2.21 I Acyl-ACP thioesterase
JPDEFOMO_02195 4.5e-144 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JPDEFOMO_02196 2.2e-57 yabA L Involved in initiation control of chromosome replication
JPDEFOMO_02197 5.3e-173 holB 2.7.7.7 L DNA polymerase III
JPDEFOMO_02198 4.6e-52 yaaQ S Cyclic-di-AMP receptor
JPDEFOMO_02199 5.1e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JPDEFOMO_02200 5.8e-34 S Protein of unknown function (DUF2508)
JPDEFOMO_02201 1.3e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JPDEFOMO_02202 1.7e-32 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JPDEFOMO_02203 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JPDEFOMO_02204 3.8e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JPDEFOMO_02205 5.6e-50
JPDEFOMO_02206 6.2e-108 rsmC 2.1.1.172 J Methyltransferase
JPDEFOMO_02207 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JPDEFOMO_02208 1.8e-45
JPDEFOMO_02209 2.9e-176 ccpB 5.1.1.1 K lacI family
JPDEFOMO_02210 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
JPDEFOMO_02211 3.4e-158 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
JPDEFOMO_02212 1.1e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JPDEFOMO_02213 6.5e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JPDEFOMO_02214 3e-221 mdtG EGP Major facilitator Superfamily
JPDEFOMO_02215 3.8e-156 K acetyltransferase
JPDEFOMO_02216 2.1e-67
JPDEFOMO_02217 2.1e-219 yceI G Sugar (and other) transporter
JPDEFOMO_02218 4.2e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
JPDEFOMO_02219 1.3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JPDEFOMO_02220 8.2e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JPDEFOMO_02221 0.0 mgtA 3.6.3.2, 3.6.3.6 P COG0474 Cation transport ATPase
JPDEFOMO_02222 5.2e-273 nylA 3.5.1.4 J Belongs to the amidase family
JPDEFOMO_02223 3.9e-68 frataxin S Domain of unknown function (DU1801)
JPDEFOMO_02224 6.4e-96 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S Cobalamin adenosyltransferase
JPDEFOMO_02225 4.3e-98 S ECF transporter, substrate-specific component
JPDEFOMO_02226 5.1e-63 S Domain of unknown function (DUF4430)
JPDEFOMO_02227 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
JPDEFOMO_02228 5e-78 F Nucleoside 2-deoxyribosyltransferase
JPDEFOMO_02229 5.8e-160 S Alpha/beta hydrolase of unknown function (DUF915)
JPDEFOMO_02230 3.4e-100 nusG K Participates in transcription elongation, termination and antitermination
JPDEFOMO_02231 5.7e-22 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
JPDEFOMO_02232 5.5e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
JPDEFOMO_02233 2.6e-172 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
JPDEFOMO_02234 9e-170 menA 2.5.1.74 M UbiA prenyltransferase family
JPDEFOMO_02235 4e-198 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JPDEFOMO_02236 3e-138 cad S FMN_bind
JPDEFOMO_02237 0.0 ndh 1.6.99.3 C NADH dehydrogenase
JPDEFOMO_02238 1.4e-80 ynhH S NusG domain II
JPDEFOMO_02239 1.2e-98 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
JPDEFOMO_02240 9e-181 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JPDEFOMO_02242 2.7e-123 1.5.1.40 S Rossmann-like domain
JPDEFOMO_02243 3.9e-190 XK27_00915 C Luciferase-like monooxygenase
JPDEFOMO_02245 2.4e-98 yacP S YacP-like NYN domain
JPDEFOMO_02246 6.6e-142 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JPDEFOMO_02247 6.5e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JPDEFOMO_02248 1e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
JPDEFOMO_02249 3e-262 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
JPDEFOMO_02250 2.7e-108
JPDEFOMO_02252 6.2e-274 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JPDEFOMO_02253 6.5e-187 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
JPDEFOMO_02254 1.8e-119 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
JPDEFOMO_02255 9.1e-142 K SIS domain
JPDEFOMO_02256 8.2e-114 yhfC S Putative membrane peptidase family (DUF2324)
JPDEFOMO_02257 2.8e-177 S Membrane
JPDEFOMO_02258 7.2e-62 K helix_turn_helix gluconate operon transcriptional repressor
JPDEFOMO_02259 1.7e-176 K helix_turn_helix, Arsenical Resistance Operon Repressor
JPDEFOMO_02260 4.2e-144 V ABC transporter
JPDEFOMO_02261 1.8e-131 V ABC-2 type transporter
JPDEFOMO_02262 1.7e-134 V ABC-2 type transporter
JPDEFOMO_02263 4.9e-219 inlJ M MucBP domain
JPDEFOMO_02264 1.1e-133 S ABC-2 family transporter protein
JPDEFOMO_02265 3.6e-160 V ABC transporter, ATP-binding protein
JPDEFOMO_02266 4.9e-165 K sequence-specific DNA binding
JPDEFOMO_02267 3.3e-203 yacL S domain protein
JPDEFOMO_02268 1.3e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JPDEFOMO_02269 4.3e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTPase
JPDEFOMO_02270 9.9e-51 HA62_12640 S GCN5-related N-acetyl-transferase
JPDEFOMO_02271 9.5e-70 S Protein of unknown function (DUF805)
JPDEFOMO_02272 4.2e-258 pepC 3.4.22.40 E aminopeptidase
JPDEFOMO_02273 9.3e-261 pepC 3.4.22.40 E Peptidase C1-like family
JPDEFOMO_02274 5.7e-200
JPDEFOMO_02275 7e-220 S ABC-2 family transporter protein
JPDEFOMO_02276 5.1e-167 V ATPases associated with a variety of cellular activities
JPDEFOMO_02277 0.0 kup P Transport of potassium into the cell
JPDEFOMO_02278 0.0 ppdK 2.7.9.1 G Belongs to the PEP-utilizing enzyme family
JPDEFOMO_02279 1.1e-104 ccpN K Domain in cystathionine beta-synthase and other proteins.
JPDEFOMO_02280 7.7e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JPDEFOMO_02281 5.4e-206 ltrA S Bacterial low temperature requirement A protein (LtrA)
JPDEFOMO_02282 7.2e-46
JPDEFOMO_02283 2e-208 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
JPDEFOMO_02284 1e-09 yhjA K CsbD-like
JPDEFOMO_02285 1.4e-231 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
JPDEFOMO_02286 1.3e-213 EGP Major facilitator Superfamily
JPDEFOMO_02287 1.6e-142 udp 2.4.2.3, 3.2.2.4 F Phosphorylase superfamily
JPDEFOMO_02288 7.2e-212 EGP Major facilitator Superfamily
JPDEFOMO_02289 3e-190 KT Purine catabolism regulatory protein-like family
JPDEFOMO_02290 7e-08
JPDEFOMO_02291 1.9e-32
JPDEFOMO_02292 2.6e-39
JPDEFOMO_02293 2.9e-224 pimH EGP Major facilitator Superfamily
JPDEFOMO_02294 2e-201 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JPDEFOMO_02295 1e-148 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JPDEFOMO_02297 3.1e-42
JPDEFOMO_02298 4.8e-165 ywhK S Membrane
JPDEFOMO_02299 2.9e-148 3.4.22.70 M Sortase family
JPDEFOMO_02300 3.1e-300 M Cna protein B-type domain
JPDEFOMO_02301 3.4e-239
JPDEFOMO_02302 0.0 M domain protein
JPDEFOMO_02303 1.8e-101
JPDEFOMO_02304 1.4e-231 N Uncharacterized conserved protein (DUF2075)
JPDEFOMO_02305 1e-206 MA20_36090 S Protein of unknown function (DUF2974)
JPDEFOMO_02306 4e-113 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_02307 8.9e-56 K Transcriptional regulator PadR-like family
JPDEFOMO_02308 1.3e-65
JPDEFOMO_02309 4.5e-138
JPDEFOMO_02310 5.4e-46 S Enterocin A Immunity
JPDEFOMO_02311 3.6e-45 S Enterocin A Immunity
JPDEFOMO_02312 7.5e-46 spiA K TRANSCRIPTIONal
JPDEFOMO_02313 1.5e-250 yjjP S Putative threonine/serine exporter
JPDEFOMO_02315 2.7e-54
JPDEFOMO_02316 5.3e-227 mesE M Transport protein ComB
JPDEFOMO_02317 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JPDEFOMO_02320 1.5e-134 2.7.13.3 T protein histidine kinase activity
JPDEFOMO_02321 1.2e-115 plnD K LytTr DNA-binding domain
JPDEFOMO_02323 7.8e-11
JPDEFOMO_02326 4.8e-146 S CAAX protease self-immunity
JPDEFOMO_02328 4.4e-55
JPDEFOMO_02329 6.7e-07 M CAAX protease self-immunity
JPDEFOMO_02330 1.4e-53 S Enterocin A Immunity
JPDEFOMO_02331 3.2e-104 yncA 2.3.1.79 S Maltose acetyltransferase
JPDEFOMO_02335 3e-181 S Aldo keto reductase
JPDEFOMO_02336 2.7e-121 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JPDEFOMO_02337 5.8e-219 yqiG C Oxidoreductase
JPDEFOMO_02338 6e-255 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
JPDEFOMO_02339 1.5e-135
JPDEFOMO_02340 4.5e-20
JPDEFOMO_02341 6.5e-261 mntH P H( )-stimulated, divalent metal cation uptake system
JPDEFOMO_02342 0.0 pacL P P-type ATPase
JPDEFOMO_02343 4.9e-55
JPDEFOMO_02344 3.2e-240 EGP Major Facilitator Superfamily
JPDEFOMO_02345 0.0 mco Q Multicopper oxidase
JPDEFOMO_02346 1.2e-25
JPDEFOMO_02347 6.4e-111 2.5.1.105 P Cation efflux family
JPDEFOMO_02348 5.4e-53 czrA K Transcriptional regulator, ArsR family
JPDEFOMO_02349 7.6e-177 sitA P Belongs to the bacterial solute-binding protein 9 family
JPDEFOMO_02350 6.6e-146 mtsB U ABC 3 transport family
JPDEFOMO_02351 3.4e-132 mntB 3.6.3.35 P AAA domain, putative AbiEii toxin, Type IV TA system
JPDEFOMO_02352 5e-276 aldA 1.2.1.21, 1.2.1.22 C Belongs to the aldehyde dehydrogenase family
JPDEFOMO_02353 6e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JPDEFOMO_02354 1.5e-166 znuA P Belongs to the bacterial solute-binding protein 9 family
JPDEFOMO_02355 1.2e-117 GM NmrA-like family
JPDEFOMO_02356 1.4e-113 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
JPDEFOMO_02357 1.2e-70
JPDEFOMO_02358 1.4e-259 M domain protein
JPDEFOMO_02359 1.3e-165 znuA P Belongs to the bacterial solute-binding protein 9 family
JPDEFOMO_02360 6.1e-20
JPDEFOMO_02361 3.2e-70
JPDEFOMO_02364 6.8e-237 3.1.11.5 L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JPDEFOMO_02365 3e-64 3.1.11.5 L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JPDEFOMO_02366 3.6e-55 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JPDEFOMO_02367 3e-69 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JPDEFOMO_02369 9.5e-37 eno 4.2.1.11 G phosphopyruvate hydratase activity
JPDEFOMO_02370 2.3e-157 phnD P Phosphonate ABC transporter
JPDEFOMO_02371 3.7e-137 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
JPDEFOMO_02372 2.1e-135 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
JPDEFOMO_02373 5.9e-146 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
JPDEFOMO_02374 8.7e-176 ssuA P NMT1-like family
JPDEFOMO_02375 1e-292 6.2.1.3, 6.2.1.8 IQ AMP-binding enzyme C-terminal domain
JPDEFOMO_02376 2.1e-235 yfiQ I Acyltransferase family
JPDEFOMO_02377 3.3e-116 ssuB P ATPases associated with a variety of cellular activities
JPDEFOMO_02378 2.4e-147 ssuC U Binding-protein-dependent transport system inner membrane component
JPDEFOMO_02379 2.5e-133 S ABC-2 family transporter protein
JPDEFOMO_02380 7e-136 S ABC-2 family transporter protein
JPDEFOMO_02381 2.3e-136 S ABC transporter
JPDEFOMO_02382 5.6e-95 S Protein of unknown function (DUF2785)
JPDEFOMO_02383 7.2e-10 S Protein of unknown function (DUF2785)
JPDEFOMO_02384 8.2e-102
JPDEFOMO_02385 6.7e-56
JPDEFOMO_02386 1.1e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
JPDEFOMO_02387 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JPDEFOMO_02388 9.8e-109 K Bacterial regulatory proteins, tetR family
JPDEFOMO_02389 5.9e-186 yxeA V FtsX-like permease family
JPDEFOMO_02390 2.9e-128 devA 3.6.3.25 V ATPases associated with a variety of cellular activities
JPDEFOMO_02391 1.1e-33
JPDEFOMO_02392 1.3e-113 tipA K TipAS antibiotic-recognition domain
JPDEFOMO_02393 2.9e-139 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JPDEFOMO_02394 8.7e-142 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JPDEFOMO_02395 6e-157 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JPDEFOMO_02396 1.6e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JPDEFOMO_02397 8e-120
JPDEFOMO_02398 9.6e-10
JPDEFOMO_02399 4.8e-61 rplQ J Ribosomal protein L17
JPDEFOMO_02400 3.6e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JPDEFOMO_02401 4e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JPDEFOMO_02402 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JPDEFOMO_02403 6.6e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
JPDEFOMO_02404 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JPDEFOMO_02405 5.4e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JPDEFOMO_02406 8.9e-232 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JPDEFOMO_02407 6.5e-62 rplO J Binds to the 23S rRNA
JPDEFOMO_02408 3.9e-24 rpmD J Ribosomal protein L30
JPDEFOMO_02409 1.2e-83 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JPDEFOMO_02410 1.8e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JPDEFOMO_02411 1.7e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JPDEFOMO_02412 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JPDEFOMO_02413 8.5e-96 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JPDEFOMO_02414 1.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JPDEFOMO_02415 2.1e-58 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JPDEFOMO_02416 1.9e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JPDEFOMO_02417 1.1e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
JPDEFOMO_02418 2.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JPDEFOMO_02419 6.2e-109 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JPDEFOMO_02420 1.1e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JPDEFOMO_02421 2.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JPDEFOMO_02422 2.9e-156 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JPDEFOMO_02423 2e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JPDEFOMO_02424 1.7e-108 rplD J Forms part of the polypeptide exit tunnel
JPDEFOMO_02425 4e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JPDEFOMO_02426 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
JPDEFOMO_02427 1.6e-68 psiE S Phosphate-starvation-inducible E
JPDEFOMO_02428 6.5e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
JPDEFOMO_02429 3.7e-201 yfjR K WYL domain
JPDEFOMO_02430 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JPDEFOMO_02431 8.4e-84 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JPDEFOMO_02432 1.2e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JPDEFOMO_02433 0.0 M domain protein
JPDEFOMO_02434 2e-35 3.4.23.43
JPDEFOMO_02435 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JPDEFOMO_02436 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JPDEFOMO_02437 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
JPDEFOMO_02438 4.3e-80 ctsR K Belongs to the CtsR family
JPDEFOMO_02447 6.6e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
JPDEFOMO_02448 1.9e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JPDEFOMO_02449 5.9e-163 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JPDEFOMO_02450 1e-162 S WxL domain surface cell wall-binding
JPDEFOMO_02452 1.3e-185 S Bacterial protein of unknown function (DUF916)
JPDEFOMO_02453 8e-196 S Protein of unknown function C-terminal (DUF3324)
JPDEFOMO_02454 0.0 S Leucine-rich repeat (LRR) protein
JPDEFOMO_02455 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JPDEFOMO_02456 1.3e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JPDEFOMO_02457 2.5e-242 tilS 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JPDEFOMO_02458 9.3e-70 yabR J RNA binding
JPDEFOMO_02459 1.1e-66 divIC D cell cycle
JPDEFOMO_02460 2.7e-39 yabO J S4 domain protein
JPDEFOMO_02461 7.2e-281 yabM S Polysaccharide biosynthesis protein
JPDEFOMO_02462 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JPDEFOMO_02463 3.6e-102 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JPDEFOMO_02464 4.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
JPDEFOMO_02465 5e-262 S Putative peptidoglycan binding domain
JPDEFOMO_02466 3.4e-97 padR K Transcriptional regulator PadR-like family
JPDEFOMO_02467 7e-238 XK27_06930 S ABC-2 family transporter protein
JPDEFOMO_02468 8.1e-116 1.6.5.2 S Flavodoxin-like fold
JPDEFOMO_02469 2.3e-119 S (CBS) domain
JPDEFOMO_02470 8.1e-123 yciB M ErfK YbiS YcfS YnhG
JPDEFOMO_02471 3.4e-285 gltD 1.4.1.13, 1.4.1.14 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
JPDEFOMO_02472 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1, 2.1.1.21 E GXGXG motif
JPDEFOMO_02473 4e-87 S QueT transporter
JPDEFOMO_02474 5.6e-62 ndoA L Toxic component of a toxin-antitoxin (TA) module
JPDEFOMO_02475 5.2e-32
JPDEFOMO_02476 1.1e-217 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JPDEFOMO_02477 8.5e-63 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JPDEFOMO_02478 7e-265 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
JPDEFOMO_02480 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JPDEFOMO_02481 1.1e-144
JPDEFOMO_02482 5.1e-124 S Tetratricopeptide repeat
JPDEFOMO_02483 3.7e-125
JPDEFOMO_02484 1.2e-65
JPDEFOMO_02485 2.5e-42 rpmE2 J Ribosomal protein L31
JPDEFOMO_02486 1.6e-235 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JPDEFOMO_02487 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JPDEFOMO_02488 1.3e-157 S Protein of unknown function (DUF1211)
JPDEFOMO_02489 4.5e-54 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
JPDEFOMO_02490 1.6e-79 ywiB S Domain of unknown function (DUF1934)
JPDEFOMO_02491 2.1e-157 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
JPDEFOMO_02492 1.2e-268 ywfO S HD domain protein
JPDEFOMO_02493 6.3e-30 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L nUDIX hydrolase
JPDEFOMO_02494 7.5e-181 S DUF218 domain
JPDEFOMO_02495 2.1e-53 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JPDEFOMO_02496 3e-79 E glutamate:sodium symporter activity
JPDEFOMO_02497 1.2e-55 nudA S ASCH
JPDEFOMO_02498 2.5e-26
JPDEFOMO_02499 1.3e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JPDEFOMO_02500 2.2e-217 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JPDEFOMO_02501 4e-223 ysaA V RDD family
JPDEFOMO_02502 1e-151 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
JPDEFOMO_02503 1.6e-120 ybbL S ABC transporter, ATP-binding protein
JPDEFOMO_02504 5.8e-119 ybbM S Uncharacterised protein family (UPF0014)
JPDEFOMO_02505 1e-159 czcD P cation diffusion facilitator family transporter
JPDEFOMO_02506 1.8e-181 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JPDEFOMO_02507 1.1e-37 veg S Biofilm formation stimulator VEG
JPDEFOMO_02508 6.8e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JPDEFOMO_02509 1.3e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JPDEFOMO_02510 3.6e-148 tatD L hydrolase, TatD family
JPDEFOMO_02511 2.6e-80 manR 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G phosphoenolpyruvate-dependent sugar phosphotransferase system
JPDEFOMO_02512 5e-187 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
JPDEFOMO_02513 1.1e-172 yqhA G Aldose 1-epimerase
JPDEFOMO_02514 1.5e-124 T LytTr DNA-binding domain
JPDEFOMO_02515 1.3e-141 2.7.13.3 T GHKL domain
JPDEFOMO_02516 0.0 V ABC transporter
JPDEFOMO_02517 0.0 V ABC transporter
JPDEFOMO_02518 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JPDEFOMO_02519 4.3e-174 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
JPDEFOMO_02520 3e-153 yunF F Protein of unknown function DUF72
JPDEFOMO_02521 3.8e-92 3.6.1.55 F NUDIX domain
JPDEFOMO_02522 6e-171 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
JPDEFOMO_02523 1.6e-106 yiiE S Protein of unknown function (DUF1211)
JPDEFOMO_02524 2.8e-128 cobB K Sir2 family
JPDEFOMO_02525 1.4e-16
JPDEFOMO_02526 4.2e-172
JPDEFOMO_02528 9.4e-97 yxkA S Phosphatidylethanolamine-binding protein
JPDEFOMO_02529 1.6e-18
JPDEFOMO_02530 1.5e-149 ypuA S Protein of unknown function (DUF1002)
JPDEFOMO_02531 1e-173 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
JPDEFOMO_02532 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JPDEFOMO_02533 1.2e-285 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
JPDEFOMO_02534 2.9e-176 S Aldo keto reductase
JPDEFOMO_02535 3.6e-154 Q Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
JPDEFOMO_02536 8.1e-93 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
JPDEFOMO_02537 2.2e-241 dinF V MatE
JPDEFOMO_02538 6.6e-111 S TPM domain
JPDEFOMO_02539 2.1e-103 lemA S LemA family
JPDEFOMO_02540 4.8e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
JPDEFOMO_02541 1.7e-205 V efflux transmembrane transporter activity
JPDEFOMO_02542 1e-15
JPDEFOMO_02543 6.9e-96 gshR 1.8.1.7 C Glutathione reductase
JPDEFOMO_02545 0.0 helD 3.6.4.12 L DNA helicase
JPDEFOMO_02546 1.8e-150 rlrG K Transcriptional regulator
JPDEFOMO_02547 3.6e-174 shetA P Voltage-dependent anion channel
JPDEFOMO_02548 2.2e-114 S CAAX protease self-immunity
JPDEFOMO_02550 1.1e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
JPDEFOMO_02551 2.7e-70 K MarR family
JPDEFOMO_02552 0.0 uvrA3 L excinuclease ABC
JPDEFOMO_02553 1.2e-193 yghZ C Aldo keto reductase family protein
JPDEFOMO_02554 3e-145 S hydrolase
JPDEFOMO_02555 8.1e-60
JPDEFOMO_02556 1.4e-11
JPDEFOMO_02557 1.3e-106 yoaK S Protein of unknown function (DUF1275)
JPDEFOMO_02558 6.4e-125 yjhF G Phosphoglycerate mutase family
JPDEFOMO_02559 3e-153 yitU 3.1.3.104 S hydrolase
JPDEFOMO_02560 4.7e-90 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JPDEFOMO_02561 5.8e-166 K LysR substrate binding domain
JPDEFOMO_02562 9.2e-228 EK Aminotransferase, class I
JPDEFOMO_02563 0.0 norB EGP Major Facilitator
JPDEFOMO_02564 3.7e-110 K Bacterial regulatory proteins, tetR family
JPDEFOMO_02565 4.9e-181 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JPDEFOMO_02566 2e-118 ydfK S Protein of unknown function (DUF554)
JPDEFOMO_02567 1.6e-60
JPDEFOMO_02568 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_02569 7.8e-174 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
JPDEFOMO_02570 2.8e-129 rpl K Helix-turn-helix domain, rpiR family
JPDEFOMO_02571 1.9e-294 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JPDEFOMO_02572 8.7e-136 K UTRA domain
JPDEFOMO_02573 5e-253 fucA 3.2.1.51 GH29 G Alpha-L-fucosidase
JPDEFOMO_02574 2.5e-164 2.7.1.191 G PTS system sorbose subfamily IIB component
JPDEFOMO_02575 9.5e-128 G PTS system sorbose-specific iic component
JPDEFOMO_02576 5.3e-150 G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_02577 6.6e-48 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
JPDEFOMO_02578 1.2e-49 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_02579 9.8e-293 bgl 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JPDEFOMO_02580 6.2e-157 ypbG 2.7.1.2 GK ROK family
JPDEFOMO_02581 2e-252 S Metal-independent alpha-mannosidase (GH125)
JPDEFOMO_02582 0.0 mngB 3.2.1.170 GH38 G Glycosyl hydrolases family 38 N-terminal domain
JPDEFOMO_02583 4.4e-239 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JPDEFOMO_02584 7.2e-135 K UbiC transcription regulator-associated domain protein
JPDEFOMO_02586 3.5e-137 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
JPDEFOMO_02588 5.3e-247 pts36C G PTS system sugar-specific permease component
JPDEFOMO_02589 2e-52 sgcB 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_02590 1e-84 pts36A 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_02591 1.6e-143 K DeoR C terminal sensor domain
JPDEFOMO_02592 3.9e-164 J Methyltransferase domain
JPDEFOMO_02593 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
JPDEFOMO_02596 5e-40 plyA3 M Right handed beta helix region
JPDEFOMO_02597 3.6e-285 M Right handed beta helix region
JPDEFOMO_02598 1e-62
JPDEFOMO_02599 0.0 M Heparinase II/III N-terminus
JPDEFOMO_02601 2.1e-82 G PTS system fructose IIA component
JPDEFOMO_02602 5.6e-144 agaD G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_02603 4.3e-144 G PTS system sorbose-specific iic component
JPDEFOMO_02604 1.2e-88 agaV 2.7.1.191 G PTS system sorbose subfamily IIB component
JPDEFOMO_02605 3.7e-237 ugl 3.2.1.180 GH88 S Glycosyl Hydrolase Family 88
JPDEFOMO_02606 1.1e-158 Z012_03480 S Psort location Cytoplasmic, score
JPDEFOMO_02607 5.1e-139 K Bacterial transcriptional regulator
JPDEFOMO_02608 6.6e-164 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
JPDEFOMO_02609 2.2e-151 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JPDEFOMO_02610 1.6e-117 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
JPDEFOMO_02611 6.1e-196 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
JPDEFOMO_02612 8.2e-122 alkD L DNA alkylation repair enzyme
JPDEFOMO_02613 3.4e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JPDEFOMO_02614 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JPDEFOMO_02615 1.5e-172 ykoT GT2 M Glycosyl transferase family 2
JPDEFOMO_02616 6.1e-120 lssY 3.6.1.27 I phosphatase
JPDEFOMO_02617 1.2e-117 dedA S SNARE-like domain protein
JPDEFOMO_02618 2.6e-242 T PhoQ Sensor
JPDEFOMO_02619 5.4e-127 K Transcriptional regulatory protein, C terminal
JPDEFOMO_02620 5.8e-274 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
JPDEFOMO_02621 3.6e-296 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
JPDEFOMO_02622 0.0 4.2.2.1 PL8 N Polysaccharide lyase family 8, N terminal alpha-helical domain
JPDEFOMO_02623 0.0
JPDEFOMO_02625 6.3e-111
JPDEFOMO_02626 8.9e-87
JPDEFOMO_02627 2.9e-125 mga K M protein trans-acting positive regulator
JPDEFOMO_02628 3.4e-129 mga K transcriptional antiterminator
JPDEFOMO_02629 1.4e-120 K Helix-turn-helix domain, rpiR family
JPDEFOMO_02630 1.5e-83 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JPDEFOMO_02631 2.9e-207 S DUF218 domain
JPDEFOMO_02632 3.7e-137 4.1.2.14 S KDGP aldolase
JPDEFOMO_02633 5.3e-206 selA 2.9.1.1 H L-seryl-tRNA selenium transferase
JPDEFOMO_02634 3.1e-217 dho 3.5.2.3 S Amidohydrolase family
JPDEFOMO_02635 1.1e-119 S Domain of unknown function (DUF4310)
JPDEFOMO_02636 2.9e-137 S Domain of unknown function (DUF4311)
JPDEFOMO_02637 8.1e-58 S Domain of unknown function (DUF4312)
JPDEFOMO_02638 6.9e-62 S Glycine-rich SFCGS
JPDEFOMO_02639 3.3e-56 S PRD domain
JPDEFOMO_02640 0.0 K Mga helix-turn-helix domain
JPDEFOMO_02641 5.3e-124 tal 2.2.1.2 H Pfam:Transaldolase
JPDEFOMO_02642 1.3e-63 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
JPDEFOMO_02643 1.6e-205 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
JPDEFOMO_02644 6.3e-102 srlA G PTS system enzyme II sorbitol-specific factor
JPDEFOMO_02645 2.5e-89 gutM K Glucitol operon activator protein (GutM)
JPDEFOMO_02646 0.0 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GKT Mga helix-turn-helix domain
JPDEFOMO_02647 5e-145 IQ NAD dependent epimerase/dehydratase family
JPDEFOMO_02648 9.2e-138 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
JPDEFOMO_02649 1.4e-150 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
JPDEFOMO_02650 2.3e-167 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
JPDEFOMO_02651 5.7e-138 repA K DeoR C terminal sensor domain
JPDEFOMO_02652 1.1e-115 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
JPDEFOMO_02653 9.7e-46 sgaB 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_02654 3.5e-280 ulaA S PTS system sugar-specific permease component
JPDEFOMO_02655 5e-81 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_02656 1.9e-216 ulaG S Beta-lactamase superfamily domain
JPDEFOMO_02657 2.6e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JPDEFOMO_02658 6.7e-198 C Zinc-binding dehydrogenase
JPDEFOMO_02659 5.2e-92 4.1.2.13 G DeoC/LacD family aldolase
JPDEFOMO_02660 7.8e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
JPDEFOMO_02661 1.1e-158 G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_02662 1.7e-126 G PTS system sorbose-specific iic component
JPDEFOMO_02663 1.2e-82 2.7.1.191 G PTS system sorbose subfamily IIB component
JPDEFOMO_02664 3.5e-73 2.7.1.191 G PTS system fructose IIA component
JPDEFOMO_02665 2e-205 gutB 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
JPDEFOMO_02666 6.4e-134 K DeoR C terminal sensor domain
JPDEFOMO_02667 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
JPDEFOMO_02668 1.4e-159 bglK_1 GK ROK family
JPDEFOMO_02669 1.2e-182 aspG 3.4.19.5, 3.5.1.1, 3.5.1.26 E Asparaginase
JPDEFOMO_02670 3.9e-259 3.5.1.18 E Peptidase family M20/M25/M40
JPDEFOMO_02671 1.7e-131 ymfC K UTRA
JPDEFOMO_02672 1.9e-305 aspD 4.1.1.12 E Aminotransferase
JPDEFOMO_02673 1.5e-214 uhpT EGP Major facilitator Superfamily
JPDEFOMO_02674 2.4e-208 3.2.1.51 GH29 G Alpha-L-fucosidase
JPDEFOMO_02675 3.3e-71 S Domain of unknown function (DUF4428)
JPDEFOMO_02676 3.3e-283 xylB 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
JPDEFOMO_02677 2.4e-203 C Zinc-binding dehydrogenase
JPDEFOMO_02678 3.3e-155 G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_02679 1.8e-136 G PTS system sorbose-specific iic component
JPDEFOMO_02680 5.5e-83 2.7.1.191 G PTS system sorbose subfamily IIB component
JPDEFOMO_02681 5.5e-71 ahaA 2.7.1.191 G PTS system fructose IIA component
JPDEFOMO_02682 1.9e-242 licR 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 K Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_02683 2.5e-31 licR 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_02684 1.1e-161 G Fructose-bisphosphate aldolase class-II
JPDEFOMO_02685 6.8e-281 rhaB 2.7.1.12, 2.7.1.17, 2.7.1.5 G FGGY family of carbohydrate kinases, C-terminal domain
JPDEFOMO_02686 1.3e-257 gatC G PTS system sugar-specific permease component
JPDEFOMO_02687 1.1e-47 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_02688 3.8e-79 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_02689 6.9e-161 gatY G Fructose-bisphosphate aldolase class-II
JPDEFOMO_02690 6.3e-134 farR K Helix-turn-helix domain
JPDEFOMO_02691 3.7e-90 hisA 5.3.1.16 M Acetyltransferase (GNAT) domain
JPDEFOMO_02692 8.3e-102 laaE K Transcriptional regulator PadR-like family
JPDEFOMO_02693 5.3e-292 chaT1 EGP Major facilitator Superfamily
JPDEFOMO_02694 3.2e-89 K Acetyltransferase (GNAT) domain
JPDEFOMO_02695 1.3e-93 yveA 3.5.1.19 Q Isochorismatase family
JPDEFOMO_02696 3.5e-57
JPDEFOMO_02698 1.6e-15 K Helix-turn-helix domain
JPDEFOMO_02699 9e-72 K Helix-turn-helix domain
JPDEFOMO_02700 4.6e-108 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
JPDEFOMO_02701 1.1e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JPDEFOMO_02702 8.6e-254 ugpB G Bacterial extracellular solute-binding protein
JPDEFOMO_02703 3.4e-149 ugpE G ABC transporter permease
JPDEFOMO_02704 6.6e-165 ugpA P ABC-type sugar transport systems, permease components
JPDEFOMO_02705 1.5e-211 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
JPDEFOMO_02706 4e-270 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JPDEFOMO_02707 9.9e-108 pncA Q Isochorismatase family
JPDEFOMO_02708 3.9e-136 3.6.1.13, 3.6.1.55 F NUDIX domain
JPDEFOMO_02709 4.4e-146 3.5.2.6 V Beta-lactamase enzyme family
JPDEFOMO_02710 1.5e-192 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
JPDEFOMO_02711 2.6e-194 blaA6 V Beta-lactamase
JPDEFOMO_02712 5.4e-156 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JPDEFOMO_02713 8.1e-163 ybbH_2 K Helix-turn-helix domain, rpiR family
JPDEFOMO_02714 3.1e-81 2.7.1.191 G PTS system sorbose subfamily IIB component
JPDEFOMO_02715 8.3e-151 G PTS system mannose/fructose/sorbose family IID component
JPDEFOMO_02716 3.1e-129 G PTS system sorbose-specific iic component
JPDEFOMO_02717 4.1e-203 S endonuclease exonuclease phosphatase family protein
JPDEFOMO_02718 1.7e-173 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
JPDEFOMO_02719 8e-105 Q Methyltransferase
JPDEFOMO_02720 3.4e-52 sugE U Multidrug resistance protein
JPDEFOMO_02721 5.3e-16
JPDEFOMO_02722 4.9e-45 I carboxylic ester hydrolase activity
JPDEFOMO_02723 7.7e-49 S alpha beta
JPDEFOMO_02724 1.9e-64 S Protein of unknown function (DUF1648)
JPDEFOMO_02725 5.1e-136 S -acetyltransferase
JPDEFOMO_02726 3.3e-94 MA20_25245 K FR47-like protein
JPDEFOMO_02727 1.5e-94 hisB 2.7.7.71, 3.1.3.15, 3.1.3.82, 3.1.3.83, 4.2.1.19, 5.3.1.28, 6.3.2.10 GT9 E HAD-hyrolase-like
JPDEFOMO_02728 1.6e-191 1.1.1.1 C nadph quinone reductase
JPDEFOMO_02729 6e-140 wzb 3.1.3.48 T Tyrosine phosphatase family
JPDEFOMO_02730 1.7e-93 K Acetyltransferase (GNAT) domain
JPDEFOMO_02731 1.6e-84 yiaC K Acetyltransferase (GNAT) domain
JPDEFOMO_02732 2.1e-79 2.3.1.82 K Acetyltransferase (GNAT) domain
JPDEFOMO_02733 3e-234 K Putative DNA-binding domain
JPDEFOMO_02734 4e-127 tnp L DDE domain
JPDEFOMO_02735 8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JPDEFOMO_02736 1.3e-199 ybiR P Citrate transporter
JPDEFOMO_02737 5.5e-70
JPDEFOMO_02738 1e-259 E Peptidase dimerisation domain
JPDEFOMO_02739 4.9e-301 E ABC transporter, substratebinding protein
JPDEFOMO_02741 2.6e-102
JPDEFOMO_02742 0.0 cadA P P-type ATPase
JPDEFOMO_02743 4.2e-77 hsp3 O Belongs to the small heat shock protein (HSP20) family
JPDEFOMO_02744 4.1e-71 S Iron-sulphur cluster biosynthesis
JPDEFOMO_02745 1e-211 htrA 3.4.21.107 O serine protease
JPDEFOMO_02747 1.2e-154 vicX 3.1.26.11 S domain protein
JPDEFOMO_02748 1.3e-140 yycI S YycH protein
JPDEFOMO_02749 7.8e-258 yycH S YycH protein
JPDEFOMO_02750 0.0 vicK 2.7.13.3 T Histidine kinase
JPDEFOMO_02751 8.1e-131 K response regulator
JPDEFOMO_02752 7.7e-123 3.1.1.24 S Alpha/beta hydrolase family
JPDEFOMO_02753 4.2e-259 arpJ P ABC transporter permease
JPDEFOMO_02754 2e-233 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
JPDEFOMO_02755 2.4e-264 argH 4.3.2.1 E argininosuccinate lyase
JPDEFOMO_02756 4.8e-215 S Bacterial protein of unknown function (DUF871)
JPDEFOMO_02757 1.6e-73 S Domain of unknown function (DUF3284)
JPDEFOMO_02758 5.5e-253 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JPDEFOMO_02759 1.1e-130 K UTRA
JPDEFOMO_02760 3.5e-52 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_02761 2.4e-53 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
JPDEFOMO_02762 1.3e-107 speG J Acetyltransferase (GNAT) domain
JPDEFOMO_02763 1.7e-84 F NUDIX domain
JPDEFOMO_02764 2.1e-91 S AAA domain
JPDEFOMO_02765 1e-113 ycaC Q Isochorismatase family
JPDEFOMO_02766 6.4e-244 ydiC1 EGP Major Facilitator Superfamily
JPDEFOMO_02767 2.9e-154 yeaN P Transporter, major facilitator family protein
JPDEFOMO_02768 2.5e-43 yeaN P Transporter, major facilitator family protein
JPDEFOMO_02769 2.5e-172 iolS C Aldo keto reductase
JPDEFOMO_02770 3.4e-64 manO S Domain of unknown function (DUF956)
JPDEFOMO_02771 2.5e-169 manN G system, mannose fructose sorbose family IID component
JPDEFOMO_02772 8.7e-121 manY G PTS system
JPDEFOMO_02773 2.4e-181 manL 2.7.1.191, 2.7.1.206 G PTS system sorbose subfamily IIB component
JPDEFOMO_02774 4.4e-220 EGP Major facilitator Superfamily
JPDEFOMO_02775 5.9e-191 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_02776 1.1e-150 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_02777 1.1e-158 K Helix-turn-helix XRE-family like proteins
JPDEFOMO_02779 3.1e-287 glnP P ABC transporter permease
JPDEFOMO_02780 8.2e-134 glnQ E ABC transporter, ATP-binding protein
JPDEFOMO_02781 3.4e-31
JPDEFOMO_02782 2.1e-238 G Bacterial extracellular solute-binding protein
JPDEFOMO_02783 1.5e-129 S Protein of unknown function (DUF975)
JPDEFOMO_02784 4.9e-41 yqkB S Iron-sulphur cluster biosynthesis
JPDEFOMO_02785 9e-53
JPDEFOMO_02786 1e-68 S Bacterial PH domain
JPDEFOMO_02787 1.1e-270 ydbT S Bacterial PH domain
JPDEFOMO_02788 1.1e-144 S AAA ATPase domain
JPDEFOMO_02789 1.2e-168 yniA G Phosphotransferase enzyme family
JPDEFOMO_02790 3.4e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JPDEFOMO_02791 4.7e-266 glnP P ABC transporter
JPDEFOMO_02792 2.1e-266 glnP P ABC transporter
JPDEFOMO_02793 3.7e-99 ydaF J Acetyltransferase (GNAT) domain
JPDEFOMO_02794 3.6e-106 S Stage II sporulation protein M
JPDEFOMO_02795 3.5e-142 yeaC S ATPase family associated with various cellular activities (AAA)
JPDEFOMO_02796 1.8e-184 yeaD S Protein of unknown function DUF58
JPDEFOMO_02797 0.0 yebA E Transglutaminase/protease-like homologues
JPDEFOMO_02798 4.1e-214 lsgC M Glycosyl transferases group 1
JPDEFOMO_02799 4.8e-90 maa 2.3.1.79 S Maltose acetyltransferase
JPDEFOMO_02800 6.9e-147 3.1.3.102, 3.1.3.104 G Sucrose-6F-phosphate phosphohydrolase
JPDEFOMO_02801 5.1e-254 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
JPDEFOMO_02802 3e-115 S Bacteriocin-protection, YdeI or OmpD-Associated
JPDEFOMO_02803 9.9e-36 yjdF S Protein of unknown function (DUF2992)
JPDEFOMO_02804 2e-214 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
JPDEFOMO_02805 4e-224 maeN C 2-hydroxycarboxylate transporter family
JPDEFOMO_02806 1.9e-289 dpiB 2.7.13.3 T Single cache domain 3
JPDEFOMO_02807 5.5e-124 dpiA KT cheY-homologous receiver domain
JPDEFOMO_02808 1e-128 1.1.1.31 I NAD binding domain of 6-phosphogluconate dehydrogenase
JPDEFOMO_02809 1.8e-95 M1-431 S Protein of unknown function (DUF1706)
JPDEFOMO_02810 3.9e-66
JPDEFOMO_02811 3e-224 yagE E Amino acid permease
JPDEFOMO_02812 8e-171 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JPDEFOMO_02813 2.5e-166 sip L Belongs to the 'phage' integrase family
JPDEFOMO_02814 2.8e-41 L DNA integration
JPDEFOMO_02815 2.2e-111 K sequence-specific DNA binding
JPDEFOMO_02817 2.3e-31
JPDEFOMO_02818 5.2e-18
JPDEFOMO_02819 1.6e-28
JPDEFOMO_02821 7.8e-25
JPDEFOMO_02822 8.6e-161 L Bifunctional DNA primase/polymerase, N-terminal
JPDEFOMO_02823 0.0 S Phage plasmid primase, P4
JPDEFOMO_02824 2.2e-54 S Phage head-tail joining protein
JPDEFOMO_02826 7.4e-23 L Phage-associated protein
JPDEFOMO_02827 1.5e-80 terS L Phage terminase, small subunit
JPDEFOMO_02828 0.0 terL S overlaps another CDS with the same product name
JPDEFOMO_02829 5.1e-21
JPDEFOMO_02830 1.1e-222 S Phage portal protein
JPDEFOMO_02831 2.4e-284 S Phage capsid family
JPDEFOMO_02832 7.4e-46 S Phage gp6-like head-tail connector protein
JPDEFOMO_02833 2.9e-16
JPDEFOMO_02834 2.2e-14 ytgB S Transglycosylase associated protein
JPDEFOMO_02836 1e-170 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JPDEFOMO_02837 6.6e-181 D Alpha beta
JPDEFOMO_02838 3.1e-186 lipA I Carboxylesterase family
JPDEFOMO_02839 5.1e-207 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
JPDEFOMO_02840 1.1e-77 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JPDEFOMO_02841 0.0 mtlR K Mga helix-turn-helix domain
JPDEFOMO_02842 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
JPDEFOMO_02843 6.9e-130 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JPDEFOMO_02844 2.8e-148 S haloacid dehalogenase-like hydrolase
JPDEFOMO_02845 3.1e-43
JPDEFOMO_02846 5.2e-10
JPDEFOMO_02847 3.3e-184 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JPDEFOMO_02848 2.9e-125 V ABC transporter
JPDEFOMO_02849 4.7e-208 bacI V MacB-like periplasmic core domain
JPDEFOMO_02850 9.5e-193 M Leucine rich repeats (6 copies)
JPDEFOMO_02851 0.0 M Leucine rich repeats (6 copies)
JPDEFOMO_02852 1e-201 gldA 1.1.1.1, 1.1.1.6 C dehydrogenase
JPDEFOMO_02853 5.1e-226 amd 3.5.1.47 E Peptidase family M20/M25/M40
JPDEFOMO_02854 2.6e-80 S Threonine/Serine exporter, ThrE
JPDEFOMO_02855 4.5e-135 thrE S Putative threonine/serine exporter
JPDEFOMO_02857 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
JPDEFOMO_02858 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JPDEFOMO_02860 2.8e-129 jag S R3H domain protein
JPDEFOMO_02861 2.6e-136 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JPDEFOMO_02862 2.1e-59 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
JPDEFOMO_02863 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
JPDEFOMO_02864 1.2e-252 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JPDEFOMO_02865 5.2e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JPDEFOMO_02867 1.7e-31 yaaA S S4 domain protein YaaA
JPDEFOMO_02868 2.5e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JPDEFOMO_02869 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JPDEFOMO_02870 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JPDEFOMO_02871 2.7e-126 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JPDEFOMO_02872 8.5e-75 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JPDEFOMO_02873 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
JPDEFOMO_02874 5.3e-67 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JPDEFOMO_02875 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JPDEFOMO_02876 5.9e-286 ytgP S Polysaccharide biosynthesis protein
JPDEFOMO_02878 5.6e-283 cydA 1.10.3.14 C Cytochrome bd terminal oxidase subunit I
JPDEFOMO_02879 2.7e-180 cydB 1.10.3.14 C Cytochrome bd terminal oxidase subunit II
JPDEFOMO_02880 1.2e-35
JPDEFOMO_02881 1.5e-106 S Protein of unknown function (DUF1211)
JPDEFOMO_02882 1.6e-105 L 4.5 Transposon and IS
JPDEFOMO_02883 2.2e-53 lsgC M Glycosyl transferases group 1
JPDEFOMO_02884 6.2e-106
JPDEFOMO_02886 6.3e-35 L Helix-turn-helix domain
JPDEFOMO_02887 2.2e-38 L Transposase and inactivated derivatives
JPDEFOMO_02888 1.8e-153 L COG2801 Transposase and inactivated derivatives
JPDEFOMO_02889 1.2e-66 tcmJ G COG0662 Mannose-6-phosphate isomerase
JPDEFOMO_02890 2.6e-34 L Uncharacterised protein family (UPF0236)
JPDEFOMO_02891 2.6e-86 L Uncharacterised protein family (UPF0236)
JPDEFOMO_02892 3.7e-71 L Protein of unknown function (DUF3991)
JPDEFOMO_02893 1.2e-100 U Relaxase/Mobilisation nuclease domain
JPDEFOMO_02894 2.6e-09 pcfF S Bacterial mobilisation protein (MobC)
JPDEFOMO_02896 6.2e-65 L IrrE N-terminal-like domain
JPDEFOMO_02897 1.5e-14
JPDEFOMO_02900 2.5e-41 M Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JPDEFOMO_02901 3.3e-256 XK27_00545 U AAA-like domain
JPDEFOMO_02902 2.9e-15 U PrgI family protein
JPDEFOMO_02903 3.5e-48
JPDEFOMO_02904 1.4e-14
JPDEFOMO_02905 1.2e-128 U TraM recognition site of TraD and TraG
JPDEFOMO_02906 6.9e-09 S Protein of unknown function (DUF3801)
JPDEFOMO_02907 2.4e-47 M Domain of unknown function (DUF5011)
JPDEFOMO_02911 7.3e-13 hupB L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JPDEFOMO_02913 2.4e-53 M Psort location Cellwall, score
JPDEFOMO_02914 5.3e-75 M Peptidase_C39 like family
JPDEFOMO_02917 3.3e-133 M Peptidase_C39 like family
JPDEFOMO_02924 1.8e-86 repA S Replication initiator protein A
JPDEFOMO_02925 9.4e-83 D CobQ CobB MinD ParA nucleotide binding domain protein
JPDEFOMO_02927 1.2e-15
JPDEFOMO_02928 5.7e-167 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
JPDEFOMO_02929 1.4e-23
JPDEFOMO_02930 6.6e-16
JPDEFOMO_02931 2.2e-152 L Integrase core domain
JPDEFOMO_02932 7.6e-14 2.7.1.200 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JPDEFOMO_02933 9.8e-19 2.7.1.200, 2.7.1.202 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPDEFOMO_02934 4.8e-47 S haloacid dehalogenase-like hydrolase
JPDEFOMO_02935 8e-120 lsrF 2.3.1.245, 4.1.2.13 G DeoC/LacD family aldolase
JPDEFOMO_02936 1.4e-134 lsrB G Autoinducer 2-binding protein lsrB
JPDEFOMO_02937 2.7e-95 lsrD U Branched-chain amino acid transport system / permease component
JPDEFOMO_02938 5.9e-95 lsrC G Belongs to the binding-protein-dependent transport system permease family
JPDEFOMO_02939 7.2e-161 lsrA 3.6.3.17 G Sugar ABC transporter ATP-binding protein
JPDEFOMO_02940 3.5e-81 lsrR K Regulator
JPDEFOMO_02941 7.7e-182 lsrK 2.7.1.189 G xylulose kinase
JPDEFOMO_02942 1.6e-47 G Cupin domain
JPDEFOMO_02943 4.8e-40 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
JPDEFOMO_02944 4e-82 L Psort location Cytoplasmic, score
JPDEFOMO_02945 3.2e-170 hprA 1.1.1.29 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JPDEFOMO_02946 9.4e-65
JPDEFOMO_02947 3.1e-53
JPDEFOMO_02948 4.6e-249 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
JPDEFOMO_02949 5e-101 hsdS_1 3.1.21.3 V Type I restriction modification DNA specificity domain
JPDEFOMO_02950 2.1e-307 hsdM 2.1.1.72 V type I restriction-modification system
JPDEFOMO_02951 0.0 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
JPDEFOMO_02952 2.1e-18 D nuclear chromosome segregation
JPDEFOMO_02953 4.4e-115 L Resolvase, N terminal domain
JPDEFOMO_02954 9.7e-35 nrdI F Belongs to the NrdI family
JPDEFOMO_02955 7e-149 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JPDEFOMO_02956 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JPDEFOMO_02957 5.4e-139 D nuclear chromosome segregation
JPDEFOMO_02958 1.8e-10 repA S Replication initiator protein A
JPDEFOMO_02959 2.1e-08 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
JPDEFOMO_02960 1.7e-33 sstT U Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JPDEFOMO_02961 0.0 treB G phosphotransferase system
JPDEFOMO_02962 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
JPDEFOMO_02963 5.5e-127 treR K UTRA
JPDEFOMO_02964 2.5e-82 S Putative transposase
JPDEFOMO_02965 3.3e-79 ydhK M Protein of unknown function (DUF1541)
JPDEFOMO_02966 9.2e-16 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
JPDEFOMO_02967 6e-24 S YoeB-like toxin of bacterial type II toxin-antitoxin system
JPDEFOMO_02968 1.4e-40 K prlF antitoxin for toxin YhaV_toxin
JPDEFOMO_02969 2.2e-57 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
JPDEFOMO_02970 3.4e-233 G Polysaccharide deacetylase
JPDEFOMO_02972 4.3e-77 repB L Initiator Replication protein
JPDEFOMO_02973 6.1e-30
JPDEFOMO_02975 2.3e-07
JPDEFOMO_02976 3.2e-16
JPDEFOMO_02978 2.2e-190 L Transposase and inactivated derivatives, IS30 family
JPDEFOMO_02979 3e-98 S Plasmid replication protein
JPDEFOMO_02981 5e-90
JPDEFOMO_02982 3.2e-68 pdxH S Pyridoxamine 5'-phosphate oxidase
JPDEFOMO_02983 2.2e-75 K Copper transport repressor CopY TcrY
JPDEFOMO_02984 0.0 copB 3.6.3.4 P P-type ATPase
JPDEFOMO_02985 1e-38 mdt(A) EGP Major facilitator Superfamily
JPDEFOMO_02986 1.5e-14 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
JPDEFOMO_02987 1.7e-48 capM M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
JPDEFOMO_02988 2.9e-46 M Glycosyltransferase like family 2
JPDEFOMO_02989 5.4e-42 M Glycosyltransferase GT-D fold
JPDEFOMO_02990 2.3e-112 M Teichoic acid biosynthesis protein
JPDEFOMO_02991 6e-63 V Glycosyl transferase, family 2
JPDEFOMO_02992 1.7e-21 S EpsG family
JPDEFOMO_02993 4.9e-61 GT2 S Glycosyl transferase family 2
JPDEFOMO_02994 2.1e-138 cps2I S Psort location CytoplasmicMembrane, score
JPDEFOMO_02995 2.5e-264 L Transposase DDE domain
JPDEFOMO_02996 3e-151 glcU U sugar transport
JPDEFOMO_03000 1.7e-219 ybfG M peptidoglycan-binding domain-containing protein
JPDEFOMO_03004 3.5e-34 repB L Initiator Replication protein
JPDEFOMO_03005 2.3e-11 ymgJ S Transglycosylase associated protein
JPDEFOMO_03006 9.4e-79 S Asp23 family, cell envelope-related function
JPDEFOMO_03007 4.3e-23 S Small integral membrane protein (DUF2273)
JPDEFOMO_03008 1.1e-93
JPDEFOMO_03009 1.8e-10 K Replication initiation factor
JPDEFOMO_03011 1.4e-46 U TraM recognition site of TraD and TraG
JPDEFOMO_03012 1.8e-14 L Transposase and inactivated derivatives
JPDEFOMO_03014 1.8e-15 S PASTA domain
JPDEFOMO_03015 5.5e-127 3.1.21.3 V Type I restriction modification DNA specificity domain
JPDEFOMO_03017 5.3e-48 repB L Protein involved in initiation of plasmid replication
JPDEFOMO_03018 3.6e-11
JPDEFOMO_03020 2.2e-33 ybfG M peptidoglycan-binding domain-containing protein
JPDEFOMO_03021 4.7e-08 G SMI1 / KNR4 family
JPDEFOMO_03022 2.6e-126 tnp L DDE domain
JPDEFOMO_03023 4.5e-109 M domain protein
JPDEFOMO_03024 2e-158 msmX P Belongs to the ABC transporter superfamily
JPDEFOMO_03025 2e-50 K Helix-turn-helix domain, rpiR family
JPDEFOMO_03026 1.5e-223 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
JPDEFOMO_03027 1.6e-52 S haloacid dehalogenase-like hydrolase
JPDEFOMO_03028 2.2e-34 treB G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JPDEFOMO_03029 5.9e-51 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JPDEFOMO_03030 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
JPDEFOMO_03031 1.4e-186 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
JPDEFOMO_03032 8.8e-37 rafA 3.2.1.22 G alpha-galactosidase
JPDEFOMO_03033 3.2e-189 L PFAM Integrase, catalytic core

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)