ORF_ID e_value Gene_name EC_number CAZy COGs Description
AMCFPIHI_00001 4.4e-109
AMCFPIHI_00002 4e-192 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
AMCFPIHI_00003 4.1e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
AMCFPIHI_00004 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
AMCFPIHI_00005 2.3e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
AMCFPIHI_00006 7.1e-94 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMCFPIHI_00007 3.4e-269 yhdG E aromatic amino acid transport protein AroP K03293
AMCFPIHI_00008 2e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AMCFPIHI_00009 7.3e-247 dgt 3.1.5.1 F Phosphohydrolase-associated domain
AMCFPIHI_00010 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
AMCFPIHI_00011 2.7e-160 K Helix-turn-helix domain, rpiR family
AMCFPIHI_00012 5.8e-230 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
AMCFPIHI_00013 1.4e-44 S Memo-like protein
AMCFPIHI_00015 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AMCFPIHI_00016 8.5e-179 adh3 C Zinc-binding dehydrogenase
AMCFPIHI_00017 4.7e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AMCFPIHI_00018 2.4e-228 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AMCFPIHI_00019 5.1e-74 zur P Belongs to the Fur family
AMCFPIHI_00020 1.5e-45
AMCFPIHI_00021 2.6e-154 S TIGRFAM TIGR03943 family protein
AMCFPIHI_00022 1.6e-202 ycgR S Predicted permease
AMCFPIHI_00023 2.3e-23 J Ribosomal L32p protein family
AMCFPIHI_00024 8.2e-15 rpmJ J Ribosomal protein L36
AMCFPIHI_00025 2e-42 rpmE2 J Ribosomal protein L31
AMCFPIHI_00026 5.3e-47 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMCFPIHI_00027 6.1e-48 rpmB J Ribosomal L28 family
AMCFPIHI_00028 1.8e-139 S cobalamin synthesis protein
AMCFPIHI_00029 2.7e-163 P Zinc-uptake complex component A periplasmic
AMCFPIHI_00031 0.0 lysX S Uncharacterised conserved protein (DUF2156)
AMCFPIHI_00032 1.7e-246 S Putative esterase
AMCFPIHI_00033 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
AMCFPIHI_00034 5e-240 purD 6.3.4.13 F Belongs to the GARS family
AMCFPIHI_00035 2e-186 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
AMCFPIHI_00036 1.3e-292 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AMCFPIHI_00037 2e-302 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
AMCFPIHI_00038 2e-32
AMCFPIHI_00039 1.8e-68 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AMCFPIHI_00040 7.1e-28 K DNA-binding transcription factor activity
AMCFPIHI_00041 5.8e-149 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
AMCFPIHI_00042 9e-97 S Protein of unknown function (DUF4230)
AMCFPIHI_00043 2.1e-107
AMCFPIHI_00044 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
AMCFPIHI_00045 3.8e-139 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
AMCFPIHI_00046 1.6e-233 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AMCFPIHI_00047 0.0 M Parallel beta-helix repeats
AMCFPIHI_00048 5.4e-228 M Glycosyl transferase 4-like domain
AMCFPIHI_00049 2.5e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
AMCFPIHI_00051 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMCFPIHI_00052 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
AMCFPIHI_00053 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMCFPIHI_00054 8.1e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMCFPIHI_00055 1.3e-174 S Esterase-like activity of phytase
AMCFPIHI_00056 6e-146 S Esterase-like activity of phytase
AMCFPIHI_00057 9.5e-190 EGP Transmembrane secretion effector
AMCFPIHI_00059 3.3e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMCFPIHI_00060 6.1e-88 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMCFPIHI_00061 1.2e-238 carA 6.3.5.5 F Belongs to the CarA family
AMCFPIHI_00062 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AMCFPIHI_00063 2e-302 gmk 2.4.2.10, 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
AMCFPIHI_00064 0.0 S Protein of unknown function DUF262
AMCFPIHI_00065 1.1e-116 K helix_turn_helix, Lux Regulon
AMCFPIHI_00066 2.3e-265 T Histidine kinase
AMCFPIHI_00067 2.8e-95 S Domain of unknown function (DUF5067)
AMCFPIHI_00068 6.6e-132 ybhL S Belongs to the BI1 family
AMCFPIHI_00069 3e-168 ydeD EG EamA-like transporter family
AMCFPIHI_00070 3.2e-121 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
AMCFPIHI_00071 1.3e-279 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AMCFPIHI_00072 4.1e-185 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMCFPIHI_00073 2e-137 fic D Fic/DOC family
AMCFPIHI_00074 0.0 ftsK D FtsK SpoIIIE family protein
AMCFPIHI_00075 3.2e-121 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMCFPIHI_00076 1.3e-96 cinA 3.5.1.42 S Belongs to the CinA family
AMCFPIHI_00077 1.6e-80 K Helix-turn-helix XRE-family like proteins
AMCFPIHI_00078 3.7e-40 S Protein of unknown function (DUF3046)
AMCFPIHI_00079 8e-216 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AMCFPIHI_00080 2.9e-87 recX S Modulates RecA activity
AMCFPIHI_00081 1e-07
AMCFPIHI_00083 6.7e-111 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AMCFPIHI_00084 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
AMCFPIHI_00085 3.9e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AMCFPIHI_00086 2.8e-108
AMCFPIHI_00087 5.1e-133 plsC2 2.3.1.51 I Phosphate acyltransferases
AMCFPIHI_00088 0.0 pknL 2.7.11.1 KLT PASTA
AMCFPIHI_00089 1e-201 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
AMCFPIHI_00090 1e-122
AMCFPIHI_00091 6.3e-181 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
AMCFPIHI_00092 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
AMCFPIHI_00093 6.4e-276 aspA 4.3.1.1 E Fumarase C C-terminus
AMCFPIHI_00094 7.9e-44 S Protein of unknown function (DUF2975)
AMCFPIHI_00095 3e-25 yozG K Cro/C1-type HTH DNA-binding domain
AMCFPIHI_00096 0.0 lhr L DEAD DEAH box helicase
AMCFPIHI_00097 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
AMCFPIHI_00098 6.5e-237 S Type I phosphodiesterase / nucleotide pyrophosphatase
AMCFPIHI_00099 3.1e-187 S Protein of unknown function (DUF3071)
AMCFPIHI_00100 1.4e-47 S Domain of unknown function (DUF4193)
AMCFPIHI_00101 2.2e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
AMCFPIHI_00102 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMCFPIHI_00103 2.7e-28
AMCFPIHI_00104 1.7e-13
AMCFPIHI_00105 1.3e-207 E Belongs to the peptidase S1B family
AMCFPIHI_00106 1.8e-68 T Toxic component of a toxin-antitoxin (TA) module
AMCFPIHI_00107 5e-50 relB L RelB antitoxin
AMCFPIHI_00108 7.5e-107 V ATPases associated with a variety of cellular activities
AMCFPIHI_00109 1.9e-185
AMCFPIHI_00110 2e-104 K Cro/C1-type HTH DNA-binding domain
AMCFPIHI_00111 2.4e-197 K Replication initiation factor
AMCFPIHI_00112 3.6e-31 L Excisionase from transposon Tn916
AMCFPIHI_00113 8.3e-162 L DNA binding domain of tn916 integrase
AMCFPIHI_00114 5.4e-103 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMCFPIHI_00115 5.5e-166 S Sucrose-6F-phosphate phosphohydrolase
AMCFPIHI_00116 2.1e-94 P ABC-type metal ion transport system permease component
AMCFPIHI_00117 2.7e-224 S Peptidase dimerisation domain
AMCFPIHI_00118 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AMCFPIHI_00119 1.2e-38
AMCFPIHI_00120 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
AMCFPIHI_00121 3.9e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AMCFPIHI_00122 4.4e-114 S Protein of unknown function (DUF3000)
AMCFPIHI_00123 2.4e-250 rnd 3.1.13.5 J 3'-5' exonuclease
AMCFPIHI_00124 2.8e-236 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
AMCFPIHI_00125 6.3e-252 clcA_2 P Voltage gated chloride channel
AMCFPIHI_00126 1.1e-112 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
AMCFPIHI_00127 1.5e-127 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
AMCFPIHI_00128 5.9e-244 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMCFPIHI_00131 1.3e-234 patB 4.4.1.8 E Aminotransferase, class I II
AMCFPIHI_00132 1.2e-225 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AMCFPIHI_00133 8.4e-168 fmt2 3.2.2.10 S Belongs to the LOG family
AMCFPIHI_00134 4.4e-118 safC S O-methyltransferase
AMCFPIHI_00135 3e-184 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
AMCFPIHI_00136 3e-71 yraN L Belongs to the UPF0102 family
AMCFPIHI_00137 1.9e-294 comM O Magnesium chelatase, subunit ChlI C-terminal
AMCFPIHI_00138 3.5e-277 dprA 5.99.1.2 LU DNA recombination-mediator protein A
AMCFPIHI_00139 1.3e-57 ybaZ 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
AMCFPIHI_00140 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
AMCFPIHI_00141 1.5e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
AMCFPIHI_00142 1.6e-157 S Putative ABC-transporter type IV
AMCFPIHI_00143 2.6e-252 metY 2.5.1.49 E Aminotransferase class-V
AMCFPIHI_00144 3.4e-162 V ABC transporter, ATP-binding protein
AMCFPIHI_00145 0.0 MV MacB-like periplasmic core domain
AMCFPIHI_00146 0.0 phoN I PAP2 superfamily
AMCFPIHI_00147 6.1e-132 K helix_turn_helix, Lux Regulon
AMCFPIHI_00148 0.0 tcsS2 T Histidine kinase
AMCFPIHI_00149 2.5e-264 pip 3.4.11.5 S alpha/beta hydrolase fold
AMCFPIHI_00150 3.2e-144 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AMCFPIHI_00151 1.9e-167 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
AMCFPIHI_00152 3.2e-147 P NLPA lipoprotein
AMCFPIHI_00153 5.9e-188 acoA 1.2.4.1 C Dehydrogenase E1 component
AMCFPIHI_00154 3.2e-184 1.2.4.1 C Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit
AMCFPIHI_00155 3.6e-205 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AMCFPIHI_00156 2.9e-93 metI P Binding-protein-dependent transport system inner membrane component
AMCFPIHI_00157 5.4e-228 mtnE 2.6.1.83 E Aminotransferase class I and II
AMCFPIHI_00158 8.8e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
AMCFPIHI_00159 2.4e-245 XK27_00240 K Fic/DOC family
AMCFPIHI_00160 1.6e-118 E Psort location Cytoplasmic, score 8.87
AMCFPIHI_00161 5.6e-59 yccF S Inner membrane component domain
AMCFPIHI_00162 1e-156 ksgA 2.1.1.182 J Methyltransferase domain
AMCFPIHI_00163 2.2e-68 S Cupin 2, conserved barrel domain protein
AMCFPIHI_00164 1.7e-256 KLT Protein tyrosine kinase
AMCFPIHI_00165 4.5e-79 K Psort location Cytoplasmic, score
AMCFPIHI_00166 4.5e-148
AMCFPIHI_00167 2.7e-22
AMCFPIHI_00168 3.5e-198 S Short C-terminal domain
AMCFPIHI_00169 2.7e-87 S Helix-turn-helix
AMCFPIHI_00170 5.2e-65 S Zincin-like metallopeptidase
AMCFPIHI_00171 1.2e-34 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
AMCFPIHI_00172 2.6e-39
AMCFPIHI_00173 2.7e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
AMCFPIHI_00174 2.5e-126 ypfH S Phospholipase/Carboxylesterase
AMCFPIHI_00175 0.0 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
AMCFPIHI_00177 1.8e-292 2.4.1.166 GT2 M Glycosyltransferase like family 2
AMCFPIHI_00178 2.9e-119 3.1.3.27 E haloacid dehalogenase-like hydrolase
AMCFPIHI_00179 1.1e-144 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
AMCFPIHI_00180 3.2e-187 MA20_14895 S Conserved hypothetical protein 698
AMCFPIHI_00181 1.1e-158 3.1.3.73 G Phosphoglycerate mutase family
AMCFPIHI_00182 4.7e-238 rutG F Permease family
AMCFPIHI_00183 4.3e-85 K AraC-like ligand binding domain
AMCFPIHI_00185 3e-53 IQ oxidoreductase activity
AMCFPIHI_00186 2.7e-135 ybbM V Uncharacterised protein family (UPF0014)
AMCFPIHI_00187 6.9e-136 ybbL V ATPases associated with a variety of cellular activities
AMCFPIHI_00188 1.3e-156 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMCFPIHI_00189 3.1e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AMCFPIHI_00190 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
AMCFPIHI_00191 5.1e-87
AMCFPIHI_00192 2.2e-204 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AMCFPIHI_00193 1.3e-215 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AMCFPIHI_00194 1.7e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
AMCFPIHI_00195 1.9e-247 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
AMCFPIHI_00196 5e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AMCFPIHI_00197 1.4e-84 argR K Regulates arginine biosynthesis genes
AMCFPIHI_00198 4.1e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
AMCFPIHI_00199 8e-179 L Phage integrase family
AMCFPIHI_00200 7.9e-40 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
AMCFPIHI_00201 6.5e-156 S Domain of unknown function (DUF4357)
AMCFPIHI_00202 0.0 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
AMCFPIHI_00203 4.2e-58 3.1.21.3 V Type I restriction modification DNA specificity domain
AMCFPIHI_00204 1.2e-275 3.6.4.12 K Putative DNA-binding domain
AMCFPIHI_00205 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
AMCFPIHI_00206 8.9e-281 argH 4.3.2.1 E argininosuccinate lyase
AMCFPIHI_00207 7.2e-109 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
AMCFPIHI_00208 5.9e-143 S Putative ABC-transporter type IV
AMCFPIHI_00209 3.7e-254 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AMCFPIHI_00210 3.6e-159 L Tetratricopeptide repeat
AMCFPIHI_00211 8.6e-190 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
AMCFPIHI_00213 3.6e-137 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
AMCFPIHI_00214 2.2e-101
AMCFPIHI_00215 6.8e-116 trkA P TrkA-N domain
AMCFPIHI_00216 1.5e-232 trkB P Cation transport protein
AMCFPIHI_00217 7.3e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AMCFPIHI_00218 1.1e-290 recN L May be involved in recombinational repair of damaged DNA
AMCFPIHI_00219 1.3e-122 S Haloacid dehalogenase-like hydrolase
AMCFPIHI_00220 1.1e-57 K helix_turn_helix gluconate operon transcriptional repressor
AMCFPIHI_00221 7.7e-177 V ATPases associated with a variety of cellular activities
AMCFPIHI_00222 3.7e-126 S ABC-2 family transporter protein
AMCFPIHI_00223 8.1e-123 S ABC-2 family transporter protein
AMCFPIHI_00224 5.1e-284 thrC 4.2.3.1 E Threonine synthase N terminus
AMCFPIHI_00225 3.1e-237 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AMCFPIHI_00226 2.3e-93
AMCFPIHI_00227 1.6e-145 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AMCFPIHI_00228 9.1e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMCFPIHI_00230 1.6e-263 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AMCFPIHI_00231 9.3e-69 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
AMCFPIHI_00232 1.1e-138 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
AMCFPIHI_00233 1.3e-78 S Bacterial PH domain
AMCFPIHI_00234 3.2e-255 nplT 3.2.1.1 GH13 G Alpha amylase, catalytic domain
AMCFPIHI_00236 1.2e-108
AMCFPIHI_00237 5e-133 C Putative TM nitroreductase
AMCFPIHI_00238 5.7e-142 yijF S Domain of unknown function (DUF1287)
AMCFPIHI_00239 2.3e-69 pdxH S Pfam:Pyridox_oxidase
AMCFPIHI_00240 2.7e-146 KT RESPONSE REGULATOR receiver
AMCFPIHI_00241 6.3e-193 V VanZ like family
AMCFPIHI_00242 5.1e-110 ycaK 1.6.5.2 S NADPH-dependent FMN reductase
AMCFPIHI_00243 6.4e-90 ypjC S Putative ABC-transporter type IV
AMCFPIHI_00244 8.9e-159
AMCFPIHI_00246 2.8e-123 EGP Major facilitator Superfamily
AMCFPIHI_00247 3.4e-164 rpoC M heme binding
AMCFPIHI_00248 4.7e-79 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AMCFPIHI_00249 2e-121
AMCFPIHI_00250 1.9e-132 S SOS response associated peptidase (SRAP)
AMCFPIHI_00251 1.1e-20 L PFAM Integrase catalytic
AMCFPIHI_00252 5.4e-186 S Acetyltransferase (GNAT) domain
AMCFPIHI_00253 2.7e-38 J Aminoacyl-tRNA editing domain
AMCFPIHI_00254 2.1e-33 2.7.7.1, 3.6.1.13, 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
AMCFPIHI_00255 4.3e-56 K Transcriptional regulator
AMCFPIHI_00256 1.2e-97 MA20_25245 K FR47-like protein
AMCFPIHI_00257 1.2e-120 ydaF_1 J Acetyltransferase (GNAT) domain
AMCFPIHI_00258 1.5e-64 yeaO K Protein of unknown function, DUF488
AMCFPIHI_00259 2.5e-163 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AMCFPIHI_00260 8.8e-284 S Psort location Cytoplasmic, score 8.87
AMCFPIHI_00261 5.3e-115 S Domain of unknown function (DUF4194)
AMCFPIHI_00262 0.0 S Psort location Cytoplasmic, score 8.87
AMCFPIHI_00263 2e-299 E Serine carboxypeptidase
AMCFPIHI_00264 4e-161 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
AMCFPIHI_00265 3.7e-171 corA P CorA-like Mg2+ transporter protein
AMCFPIHI_00266 5.8e-169 ET Bacterial periplasmic substrate-binding proteins
AMCFPIHI_00267 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
AMCFPIHI_00268 3.1e-84 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
AMCFPIHI_00269 0.0 comE S Competence protein
AMCFPIHI_00270 3.1e-181 holA 2.7.7.7 L DNA polymerase III delta subunit
AMCFPIHI_00271 1.7e-119 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
AMCFPIHI_00272 3.3e-158 yeaZ 2.3.1.234 O Glycoprotease family
AMCFPIHI_00273 3.1e-104 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
AMCFPIHI_00274 3.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AMCFPIHI_00276 2.5e-131 M Peptidase family M23
AMCFPIHI_00277 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
AMCFPIHI_00278 3.2e-276 G ABC transporter substrate-binding protein
AMCFPIHI_00279 3.3e-241 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
AMCFPIHI_00280 2.5e-200 guaB 1.1.1.205 F IMP dehydrogenase family protein
AMCFPIHI_00281 5.7e-91
AMCFPIHI_00282 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
AMCFPIHI_00283 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
AMCFPIHI_00284 1.4e-145 rpsB J Belongs to the universal ribosomal protein uS2 family
AMCFPIHI_00285 4.8e-146 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AMCFPIHI_00286 3e-127 3.2.1.8 S alpha beta
AMCFPIHI_00287 2.4e-133 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
AMCFPIHI_00288 2.4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
AMCFPIHI_00289 1.8e-176 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
AMCFPIHI_00290 1.8e-228 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
AMCFPIHI_00291 1.4e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
AMCFPIHI_00292 5.3e-74 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AMCFPIHI_00293 1.3e-309 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AMCFPIHI_00294 1.8e-245 G Bacterial extracellular solute-binding protein
AMCFPIHI_00295 1.1e-173 G Binding-protein-dependent transport system inner membrane component
AMCFPIHI_00296 1.7e-168 G ABC transporter permease
AMCFPIHI_00297 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
AMCFPIHI_00298 4.5e-177 2.7.1.2 GK ROK family
AMCFPIHI_00299 1.4e-217 GK ROK family
AMCFPIHI_00300 1.1e-206 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
AMCFPIHI_00301 2.5e-307 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
AMCFPIHI_00302 8.5e-198 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
AMCFPIHI_00303 2.6e-302 ybiT S ABC transporter
AMCFPIHI_00304 4.5e-140 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
AMCFPIHI_00305 6.7e-233 qseC 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AMCFPIHI_00306 2.1e-117 K Transcriptional regulatory protein, C terminal
AMCFPIHI_00307 8.1e-59 V MacB-like periplasmic core domain
AMCFPIHI_00308 3.6e-77
AMCFPIHI_00309 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
AMCFPIHI_00310 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
AMCFPIHI_00311 7.5e-180 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
AMCFPIHI_00312 2.6e-177 rapZ S Displays ATPase and GTPase activities
AMCFPIHI_00313 3.1e-173 whiA K May be required for sporulation
AMCFPIHI_00314 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
AMCFPIHI_00315 5.3e-147 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AMCFPIHI_00316 8e-33 secG U Preprotein translocase SecG subunit
AMCFPIHI_00317 1.3e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
AMCFPIHI_00318 6.1e-162 S Sucrose-6F-phosphate phosphohydrolase
AMCFPIHI_00319 2e-242 mepA_6 V MatE
AMCFPIHI_00322 2.6e-253 brnQ U Component of the transport system for branched-chain amino acids
AMCFPIHI_00323 1.2e-143 yoaK S Protein of unknown function (DUF1275)
AMCFPIHI_00324 1e-201 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AMCFPIHI_00325 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
AMCFPIHI_00326 1.1e-220 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
AMCFPIHI_00327 7.5e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
AMCFPIHI_00328 3.5e-159 G Fructosamine kinase
AMCFPIHI_00329 5e-168 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
AMCFPIHI_00330 1.1e-155 S PAC2 family
AMCFPIHI_00334 2.2e-261
AMCFPIHI_00337 1.7e-250 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
AMCFPIHI_00338 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AMCFPIHI_00339 0.0 3.2.1.52 GH20 M Glycosyl hydrolase family 20, catalytic domain
AMCFPIHI_00340 1e-131 yebC K transcriptional regulatory protein
AMCFPIHI_00341 1.8e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AMCFPIHI_00342 2.5e-104 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
AMCFPIHI_00343 1.8e-201 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
AMCFPIHI_00344 2.6e-44 yajC U Preprotein translocase subunit
AMCFPIHI_00345 5.5e-101 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMCFPIHI_00346 1.6e-224 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
AMCFPIHI_00347 1.1e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AMCFPIHI_00348 5e-246
AMCFPIHI_00349 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
AMCFPIHI_00350 5.7e-30
AMCFPIHI_00351 1.8e-103 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
AMCFPIHI_00352 7.5e-146 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
AMCFPIHI_00353 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
AMCFPIHI_00354 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
AMCFPIHI_00355 4.4e-163 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
AMCFPIHI_00356 2.3e-192 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMCFPIHI_00357 6.3e-101 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
AMCFPIHI_00358 6.4e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
AMCFPIHI_00359 1.8e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
AMCFPIHI_00360 3e-116 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMCFPIHI_00361 1.4e-173 S Bacterial protein of unknown function (DUF881)
AMCFPIHI_00362 2.6e-31 sbp S Protein of unknown function (DUF1290)
AMCFPIHI_00363 7.7e-141 S Bacterial protein of unknown function (DUF881)
AMCFPIHI_00364 7.3e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
AMCFPIHI_00365 2.7e-120 K helix_turn_helix, mercury resistance
AMCFPIHI_00366 7.3e-62
AMCFPIHI_00367 5.5e-15
AMCFPIHI_00368 5e-96 L DNA integration
AMCFPIHI_00369 7.2e-126 S GyrI-like small molecule binding domain
AMCFPIHI_00370 1.6e-90 K Putative zinc ribbon domain
AMCFPIHI_00373 7.3e-143 pgp 3.1.3.18 S HAD-hyrolase-like
AMCFPIHI_00374 3e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
AMCFPIHI_00375 0.0 helY L DEAD DEAH box helicase
AMCFPIHI_00376 7e-53
AMCFPIHI_00377 0.0 pafB K WYL domain
AMCFPIHI_00378 5.1e-289 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
AMCFPIHI_00380 2.4e-89 dkgB S Oxidoreductase, aldo keto reductase family protein
AMCFPIHI_00381 1.5e-143 4.1.1.44 S Carboxymuconolactone decarboxylase family
AMCFPIHI_00382 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AMCFPIHI_00383 1.5e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
AMCFPIHI_00384 1.2e-171 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
AMCFPIHI_00385 7.4e-64 T Domain of unknown function (DUF4234)
AMCFPIHI_00386 1.9e-101 K Bacterial regulatory proteins, tetR family
AMCFPIHI_00387 2.1e-18
AMCFPIHI_00388 5.8e-48 tam 2.1.1.144, 2.1.1.197 FG trans-aconitate 2-methyltransferase activity
AMCFPIHI_00389 1.4e-40 K Helix-turn-helix
AMCFPIHI_00390 7.7e-224 hipA 2.7.11.1 S HipA N-terminal domain
AMCFPIHI_00391 2.5e-67 4.1.1.44 S Cupin domain
AMCFPIHI_00392 1.8e-176 S Membrane transport protein
AMCFPIHI_00393 1e-93 laaE K Transcriptional regulator PadR-like family
AMCFPIHI_00394 2.3e-133 magIII L endonuclease III
AMCFPIHI_00395 8.1e-131 S Enoyl-(Acyl carrier protein) reductase
AMCFPIHI_00396 4.4e-242 vbsD V MatE
AMCFPIHI_00397 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AMCFPIHI_00398 1.9e-15 KLT Protein tyrosine kinase
AMCFPIHI_00399 8.2e-16 K Psort location Cytoplasmic, score
AMCFPIHI_00400 2.8e-141
AMCFPIHI_00401 4.7e-196 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
AMCFPIHI_00402 1e-16 K MerR family regulatory protein
AMCFPIHI_00403 6.5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AMCFPIHI_00404 7.4e-180 pyrD 1.3.1.14 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
AMCFPIHI_00405 7.7e-157 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
AMCFPIHI_00406 8.9e-181 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
AMCFPIHI_00407 6.5e-281 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
AMCFPIHI_00408 2e-73 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
AMCFPIHI_00409 4.9e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
AMCFPIHI_00410 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
AMCFPIHI_00412 6.2e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
AMCFPIHI_00413 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AMCFPIHI_00417 2.2e-127 3.5.1.28 M NLP P60 protein
AMCFPIHI_00418 6.5e-67 S SPP1 phage holin
AMCFPIHI_00419 8.6e-69
AMCFPIHI_00420 6.2e-50 MU outer membrane autotransporter barrel domain protein
AMCFPIHI_00421 5.7e-213
AMCFPIHI_00422 2.8e-64
AMCFPIHI_00423 0.0 S Prophage endopeptidase tail
AMCFPIHI_00424 6.1e-148 S phage tail
AMCFPIHI_00425 0.0 S Phage-related minor tail protein
AMCFPIHI_00426 6.3e-53
AMCFPIHI_00427 2.6e-83
AMCFPIHI_00428 3.6e-94
AMCFPIHI_00429 1.4e-71
AMCFPIHI_00430 6.1e-73
AMCFPIHI_00431 1.3e-78
AMCFPIHI_00432 1.3e-90
AMCFPIHI_00433 8.1e-65
AMCFPIHI_00434 3.8e-176 S Phage capsid family
AMCFPIHI_00435 6.6e-96
AMCFPIHI_00436 1.1e-43
AMCFPIHI_00437 3.4e-238
AMCFPIHI_00438 6e-279 S Phage portal protein, SPP1 Gp6-like
AMCFPIHI_00439 0.0 S Terminase
AMCFPIHI_00440 4.8e-69
AMCFPIHI_00441 1.5e-114 S Bifunctional DNA primase/polymerase, N-terminal
AMCFPIHI_00442 8.1e-66
AMCFPIHI_00445 3.2e-32 K Transcriptional regulator
AMCFPIHI_00446 1.2e-73 S HicB_like antitoxin of bacterial toxin-antitoxin system
AMCFPIHI_00447 2.8e-34 N HicA toxin of bacterial toxin-antitoxin,
AMCFPIHI_00448 2.9e-139
AMCFPIHI_00450 7e-47
AMCFPIHI_00452 3.3e-106 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
AMCFPIHI_00453 3.7e-80 V HNH endonuclease
AMCFPIHI_00454 4.3e-26
AMCFPIHI_00455 1.1e-146 K Transcriptional regulator
AMCFPIHI_00456 1.8e-267 K ParB-like nuclease domain
AMCFPIHI_00457 2.9e-93 ssb1 L Single-strand binding protein family
AMCFPIHI_00459 7.9e-38
AMCFPIHI_00461 2.2e-37
AMCFPIHI_00464 1.8e-131 K BRO family, N-terminal domain
AMCFPIHI_00465 6.3e-52
AMCFPIHI_00466 1.9e-34
AMCFPIHI_00467 9.1e-55
AMCFPIHI_00468 2.5e-104 S Virulence protein RhuM family
AMCFPIHI_00469 1.6e-51
AMCFPIHI_00470 1.3e-232 S Protein of unknown function DUF262
AMCFPIHI_00471 1.1e-34
AMCFPIHI_00472 1.1e-21
AMCFPIHI_00473 1.1e-241 int L Phage integrase, N-terminal SAM-like domain
AMCFPIHI_00474 3.4e-100 sixA T Phosphoglycerate mutase family
AMCFPIHI_00475 3.3e-208 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AMCFPIHI_00476 9.7e-177 I alpha/beta hydrolase fold
AMCFPIHI_00477 5.8e-25 rarD S Rard protein
AMCFPIHI_00478 8.1e-72 rarD 3.4.17.13 E Rard protein
AMCFPIHI_00479 8.6e-30
AMCFPIHI_00480 2.4e-271 L Uncharacterized conserved protein (DUF2075)
AMCFPIHI_00481 3.7e-187 L Transposase
AMCFPIHI_00482 4.9e-101 S Short C-terminal domain
AMCFPIHI_00483 8.3e-36 L Helix-turn-helix domain
AMCFPIHI_00484 2.6e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AMCFPIHI_00485 3e-50 S Sel1-like repeats.
AMCFPIHI_00486 3.1e-151 ybeM S Carbon-nitrogen hydrolase
AMCFPIHI_00487 1.8e-181 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
AMCFPIHI_00488 5.1e-245 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
AMCFPIHI_00489 3.6e-82
AMCFPIHI_00490 2.7e-304 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AMCFPIHI_00491 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
AMCFPIHI_00492 0.0 tetP J Elongation factor G, domain IV
AMCFPIHI_00493 2.4e-292 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
AMCFPIHI_00494 5.7e-245 hemN H Involved in the biosynthesis of porphyrin-containing compound
AMCFPIHI_00495 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
AMCFPIHI_00496 9.9e-34 rpsT J Binds directly to 16S ribosomal RNA
AMCFPIHI_00497 4.4e-135 S UPF0126 domain
AMCFPIHI_00498 2.1e-99 3.1.4.37 T RNA ligase
AMCFPIHI_00499 1.8e-46 S phosphoesterase or phosphohydrolase
AMCFPIHI_00500 1.8e-225 ilvE 2.6.1.42 E Amino-transferase class IV
AMCFPIHI_00501 8.3e-95 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AMCFPIHI_00502 4.8e-190 S alpha beta
AMCFPIHI_00503 1.5e-232 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AMCFPIHI_00504 4.4e-44 pntA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
AMCFPIHI_00505 1.1e-201 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
AMCFPIHI_00506 0.0 fadD 6.2.1.3 I AMP-binding enzyme
AMCFPIHI_00507 5.1e-187 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AMCFPIHI_00508 4.6e-242 corC S CBS domain
AMCFPIHI_00509 7.4e-100 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AMCFPIHI_00510 2e-197 phoH T PhoH-like protein
AMCFPIHI_00511 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
AMCFPIHI_00512 4e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
AMCFPIHI_00514 4e-164 spoU 2.1.1.185 J SpoU rRNA Methylase family
AMCFPIHI_00515 4.7e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AMCFPIHI_00516 9.7e-106 yitW S Iron-sulfur cluster assembly protein
AMCFPIHI_00517 8.8e-101 iscU C SUF system FeS assembly protein, NifU family
AMCFPIHI_00518 2.9e-240 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMCFPIHI_00519 1.4e-144 sufC O FeS assembly ATPase SufC
AMCFPIHI_00520 2.6e-233 sufD O FeS assembly protein SufD
AMCFPIHI_00521 3.6e-290 sufB O FeS assembly protein SufB
AMCFPIHI_00522 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
AMCFPIHI_00523 5.2e-08 3.4.22.70 M Sortase family
AMCFPIHI_00524 1.7e-120 K helix_turn_helix, Lux Regulon
AMCFPIHI_00525 1.9e-75
AMCFPIHI_00526 4.5e-79 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
AMCFPIHI_00527 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AMCFPIHI_00528 1.6e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AMCFPIHI_00529 1.3e-47 3.4.23.43 S Type IV leader peptidase family
AMCFPIHI_00530 7.1e-188 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AMCFPIHI_00531 3e-75 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMCFPIHI_00532 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMCFPIHI_00533 1.1e-36
AMCFPIHI_00534 3.8e-64 WQ51_05790 S Bacterial protein of unknown function (DUF948)
AMCFPIHI_00535 6.5e-136 pgm3 G Phosphoglycerate mutase family
AMCFPIHI_00536 0.0 oatA I Psort location CytoplasmicMembrane, score 9.99
AMCFPIHI_00537 1e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AMCFPIHI_00538 9.6e-128 lolD V ABC transporter
AMCFPIHI_00539 1.6e-211 V FtsX-like permease family
AMCFPIHI_00540 4.8e-64 S Domain of unknown function (DUF4418)
AMCFPIHI_00541 0.0 pcrA 3.6.4.12 L DNA helicase
AMCFPIHI_00542 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
AMCFPIHI_00543 3e-107 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
AMCFPIHI_00544 1.8e-240 pbuX F Permease family
AMCFPIHI_00546 1.2e-45 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
AMCFPIHI_00547 1.7e-108 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
AMCFPIHI_00549 2.1e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
AMCFPIHI_00550 5.3e-40
AMCFPIHI_00551 1.1e-26 2.1.1.72 S Adenine-specific methyltransferase EcoRI
AMCFPIHI_00552 9e-74 tnp7109-21 L Integrase core domain
AMCFPIHI_00553 1.4e-12 L Transposase
AMCFPIHI_00554 5.4e-104 K cell envelope-related transcriptional attenuator
AMCFPIHI_00556 2.2e-213
AMCFPIHI_00557 1.3e-179 S G5
AMCFPIHI_00558 1.5e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
AMCFPIHI_00559 4.8e-119 F Domain of unknown function (DUF4916)
AMCFPIHI_00560 6.9e-161 mhpC I Alpha/beta hydrolase family
AMCFPIHI_00561 2.4e-08 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
AMCFPIHI_00562 0.0 enhA_2 S L,D-transpeptidase catalytic domain
AMCFPIHI_00563 3.7e-72 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
AMCFPIHI_00564 4.1e-240 S Uncharacterized conserved protein (DUF2183)
AMCFPIHI_00565 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
AMCFPIHI_00566 1.2e-191 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
AMCFPIHI_00567 6.4e-119 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
AMCFPIHI_00568 1.6e-134 glxR K helix_turn_helix, cAMP Regulatory protein
AMCFPIHI_00569 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
AMCFPIHI_00570 5.7e-219 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
AMCFPIHI_00571 5.7e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
AMCFPIHI_00572 9.7e-144 glpR K DeoR C terminal sensor domain
AMCFPIHI_00573 3.3e-252 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
AMCFPIHI_00574 1.9e-231 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
AMCFPIHI_00575 1.9e-242 EGP Sugar (and other) transporter
AMCFPIHI_00576 4.2e-43 gcvR T Belongs to the UPF0237 family
AMCFPIHI_00577 4.7e-252 S UPF0210 protein
AMCFPIHI_00578 2.5e-72
AMCFPIHI_00580 6.3e-122 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
AMCFPIHI_00581 1.5e-07 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G Putative cell wall binding repeat
AMCFPIHI_00582 5.9e-52 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G Putative cell wall binding repeat
AMCFPIHI_00583 5.5e-185 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
AMCFPIHI_00584 3.9e-103
AMCFPIHI_00585 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMCFPIHI_00586 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMCFPIHI_00587 1.4e-95 T Forkhead associated domain
AMCFPIHI_00588 1.1e-67 B Belongs to the OprB family
AMCFPIHI_00589 3.7e-165 3.1.3.16 T Sigma factor PP2C-like phosphatases
AMCFPIHI_00590 0.0 E Transglutaminase-like superfamily
AMCFPIHI_00591 6.6e-227 S Protein of unknown function DUF58
AMCFPIHI_00592 2.3e-216 S ATPase family associated with various cellular activities (AAA)
AMCFPIHI_00593 0.0 S Fibronectin type 3 domain
AMCFPIHI_00594 2.8e-268 KLT Protein tyrosine kinase
AMCFPIHI_00595 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
AMCFPIHI_00596 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
AMCFPIHI_00597 2.6e-147 K -acetyltransferase
AMCFPIHI_00598 8.6e-257 G Major Facilitator Superfamily
AMCFPIHI_00599 6.5e-43 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
AMCFPIHI_00600 2.7e-10 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
AMCFPIHI_00601 6.4e-24 relB L RelB antitoxin
AMCFPIHI_00602 1.4e-59 L Transposase
AMCFPIHI_00603 2.2e-132 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
AMCFPIHI_00604 1.9e-161 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMCFPIHI_00605 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMCFPIHI_00606 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
AMCFPIHI_00607 7.4e-166 tetP J elongation factor G
AMCFPIHI_00608 1.4e-131 tetP J elongation factor G
AMCFPIHI_00609 2.3e-247 O Subtilase family
AMCFPIHI_00610 1.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMCFPIHI_00611 2.6e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
AMCFPIHI_00612 4e-270 S zinc finger
AMCFPIHI_00613 1.2e-100 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
AMCFPIHI_00614 2.9e-229 aspB E Aminotransferase class-V
AMCFPIHI_00615 2e-156 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
AMCFPIHI_00616 1.7e-131 tmp1 S Domain of unknown function (DUF4391)
AMCFPIHI_00617 2.6e-149 moeB 2.7.7.80 H ThiF family
AMCFPIHI_00618 4.8e-257 cdr OP Sulfurtransferase TusA
AMCFPIHI_00619 4e-181 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
AMCFPIHI_00621 2.3e-170 S Endonuclease/Exonuclease/phosphatase family
AMCFPIHI_00622 7.8e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMCFPIHI_00623 2.5e-272 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMCFPIHI_00624 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
AMCFPIHI_00625 4.3e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AMCFPIHI_00626 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
AMCFPIHI_00627 1.2e-166
AMCFPIHI_00628 2.4e-258 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
AMCFPIHI_00629 0.0 plyA3 3.2.1.18 GH33 M Parallel beta-helix repeats
AMCFPIHI_00631 1.1e-90 K MarR family
AMCFPIHI_00632 0.0 V ABC transporter, ATP-binding protein
AMCFPIHI_00633 0.0 V ABC transporter transmembrane region
AMCFPIHI_00634 2.3e-168 S Patatin-like phospholipase
AMCFPIHI_00635 1.3e-153 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
AMCFPIHI_00636 2.3e-170 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
AMCFPIHI_00637 2e-115 S Vitamin K epoxide reductase
AMCFPIHI_00638 3.9e-167 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
AMCFPIHI_00639 6.1e-32 S Protein of unknown function (DUF3107)
AMCFPIHI_00640 2.7e-237 mphA S Aminoglycoside phosphotransferase
AMCFPIHI_00641 9.6e-283 uvrD2 3.6.4.12 L DNA helicase
AMCFPIHI_00642 6.6e-279 S Zincin-like metallopeptidase
AMCFPIHI_00643 1.2e-152 lon T Belongs to the peptidase S16 family
AMCFPIHI_00644 5.7e-47 S Protein of unknown function (DUF3052)
AMCFPIHI_00645 1.2e-196 K helix_turn _helix lactose operon repressor
AMCFPIHI_00646 1.2e-61 S Thiamine-binding protein
AMCFPIHI_00647 2.7e-163 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
AMCFPIHI_00648 6.9e-231 O AAA domain (Cdc48 subfamily)
AMCFPIHI_00649 1.3e-84
AMCFPIHI_00650 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AMCFPIHI_00651 6.1e-160 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AMCFPIHI_00652 0.0 lacZ 3.2.1.23 G Domain of unknown function (DUF4982)
AMCFPIHI_00653 8.8e-300 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
AMCFPIHI_00654 3.6e-246 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMCFPIHI_00655 7.3e-231 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMCFPIHI_00656 4.3e-80 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
AMCFPIHI_00657 2.1e-42 yggT S YGGT family
AMCFPIHI_00658 9.7e-90 3.1.21.3 V DivIVA protein
AMCFPIHI_00659 4e-103 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AMCFPIHI_00660 5.8e-177 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
AMCFPIHI_00662 6e-63
AMCFPIHI_00663 5.2e-147 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
AMCFPIHI_00664 3.7e-202 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMCFPIHI_00665 2.5e-200 ftsE D Cell division ATP-binding protein FtsE
AMCFPIHI_00666 2.4e-159 ftsX D Part of the ABC transporter FtsEX involved in cellular division
AMCFPIHI_00667 2.5e-163 usp 3.5.1.28 CBM50 D CHAP domain protein
AMCFPIHI_00668 3e-76 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
AMCFPIHI_00669 9.6e-146 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
AMCFPIHI_00670 7.7e-45
AMCFPIHI_00671 5.6e-23
AMCFPIHI_00673 2.5e-201 2.7.11.1 NU Tfp pilus assembly protein FimV
AMCFPIHI_00674 5.2e-223 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
AMCFPIHI_00675 3.9e-235 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AMCFPIHI_00676 1.8e-290 I acetylesterase activity
AMCFPIHI_00677 1.5e-141 recO L Involved in DNA repair and RecF pathway recombination
AMCFPIHI_00678 5.3e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMCFPIHI_00679 4.3e-191 ywqG S Domain of unknown function (DUF1963)
AMCFPIHI_00680 2e-20 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
AMCFPIHI_00681 3e-39 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
AMCFPIHI_00682 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
AMCFPIHI_00683 7.6e-106 S zinc-ribbon domain
AMCFPIHI_00684 1.6e-46 yhbY J CRS1_YhbY
AMCFPIHI_00685 0.0 4.2.1.53 S MCRA family
AMCFPIHI_00688 8.9e-203 K WYL domain
AMCFPIHI_00689 5e-156 yvgN 1.1.1.346 S Aldo/keto reductase family
AMCFPIHI_00690 2.2e-173 dkgA 1.1.1.346 C Aldo/keto reductase family
AMCFPIHI_00691 1.2e-76 yneG S Domain of unknown function (DUF4186)
AMCFPIHI_00693 1.7e-07 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
AMCFPIHI_00694 2.3e-181 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
AMCFPIHI_00695 7.1e-256 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AMCFPIHI_00696 6.1e-224 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMCFPIHI_00697 3.2e-112 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
AMCFPIHI_00698 1.7e-112
AMCFPIHI_00699 4.8e-122 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AMCFPIHI_00700 4.9e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
AMCFPIHI_00701 4.9e-284 S Uncharacterized protein conserved in bacteria (DUF2252)
AMCFPIHI_00702 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
AMCFPIHI_00703 1e-251 S Domain of unknown function (DUF5067)
AMCFPIHI_00704 2.1e-61 EGP Major facilitator Superfamily
AMCFPIHI_00705 2.2e-177 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
AMCFPIHI_00706 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
AMCFPIHI_00707 3.1e-121 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
AMCFPIHI_00708 5.6e-37
AMCFPIHI_00709 1.2e-105
AMCFPIHI_00710 2e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMCFPIHI_00711 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
AMCFPIHI_00712 2.3e-165 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AMCFPIHI_00713 7.5e-129 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMCFPIHI_00714 1.1e-49 M Lysin motif
AMCFPIHI_00715 9.2e-83 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AMCFPIHI_00716 5.4e-228 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AMCFPIHI_00717 0.0 L DNA helicase
AMCFPIHI_00718 1.3e-90 mraZ K Belongs to the MraZ family
AMCFPIHI_00719 7.1e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
AMCFPIHI_00720 9.7e-64 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AMCFPIHI_00721 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
AMCFPIHI_00722 5.2e-179 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMCFPIHI_00723 1.1e-281 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
AMCFPIHI_00724 3.6e-202 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMCFPIHI_00725 2.7e-266 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMCFPIHI_00726 4.3e-226 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
AMCFPIHI_00727 1.7e-218 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AMCFPIHI_00728 6.8e-295 murC 6.3.2.8 M Belongs to the MurCDEF family
AMCFPIHI_00729 2.5e-159 ftsQ 6.3.2.4 D Cell division protein FtsQ
AMCFPIHI_00730 1.3e-37
AMCFPIHI_00732 2.5e-84 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
AMCFPIHI_00733 4.4e-236 G Major Facilitator Superfamily
AMCFPIHI_00734 1.9e-169 2.7.1.4 G pfkB family carbohydrate kinase
AMCFPIHI_00735 1.3e-224 GK ROK family
AMCFPIHI_00736 3.4e-132 cutC P Participates in the control of copper homeostasis
AMCFPIHI_00737 1.6e-216 GK ROK family
AMCFPIHI_00738 6.6e-153 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
AMCFPIHI_00739 1.1e-242 nagA 3.5.1.25 G Amidohydrolase family
AMCFPIHI_00740 2e-305 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
AMCFPIHI_00741 6.7e-185 dppB EP Binding-protein-dependent transport system inner membrane component
AMCFPIHI_00742 8.7e-191 dppC EP Binding-protein-dependent transport system inner membrane component
AMCFPIHI_00743 0.0 P Belongs to the ABC transporter superfamily
AMCFPIHI_00744 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
AMCFPIHI_00745 4.3e-97 3.6.1.55 F NUDIX domain
AMCFPIHI_00747 2.7e-286 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
AMCFPIHI_00748 0.0 smc D Required for chromosome condensation and partitioning
AMCFPIHI_00749 7.4e-129 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
AMCFPIHI_00750 8.9e-242 yxbA 6.3.1.12 S ATP-grasp
AMCFPIHI_00751 2.9e-229 2.6.1.33 M DegT/DnrJ/EryC1/StrS aminotransferase family
AMCFPIHI_00752 1.5e-191 V Acetyltransferase (GNAT) domain
AMCFPIHI_00753 2.2e-296 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMCFPIHI_00754 4.8e-114 sigH K Belongs to the sigma-70 factor family. ECF subfamily
AMCFPIHI_00755 2e-64
AMCFPIHI_00756 9.1e-194 galM 5.1.3.3 G Aldose 1-epimerase
AMCFPIHI_00757 1.6e-177 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AMCFPIHI_00758 7.1e-92 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AMCFPIHI_00759 1e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
AMCFPIHI_00760 4e-133 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
AMCFPIHI_00761 1.1e-31 S Spermine/spermidine synthase domain
AMCFPIHI_00762 1.4e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AMCFPIHI_00763 2.1e-25 rpmI J Ribosomal protein L35
AMCFPIHI_00764 1.1e-60 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AMCFPIHI_00765 2.9e-179 xerD D recombinase XerD
AMCFPIHI_00766 1.8e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
AMCFPIHI_00767 9.4e-150 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AMCFPIHI_00768 9.2e-113 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AMCFPIHI_00769 8.6e-150 nrtR 3.6.1.55 F NUDIX hydrolase
AMCFPIHI_00770 7.5e-252 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AMCFPIHI_00771 0.0 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
AMCFPIHI_00772 1.4e-164 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
AMCFPIHI_00773 1.2e-236 iscS1 2.8.1.7 E Aminotransferase class-V
AMCFPIHI_00774 0.0 typA T Elongation factor G C-terminus
AMCFPIHI_00775 4.9e-80
AMCFPIHI_00776 5e-198 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
AMCFPIHI_00777 1.4e-192 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
AMCFPIHI_00778 7.3e-42
AMCFPIHI_00779 6.2e-185 xerC D Belongs to the 'phage' integrase family. XerC subfamily
AMCFPIHI_00780 7.9e-177 appB EP Binding-protein-dependent transport system inner membrane component
AMCFPIHI_00781 1.3e-165 dppC EP N-terminal TM domain of oligopeptide transport permease C
AMCFPIHI_00782 0.0 oppD P Belongs to the ABC transporter superfamily
AMCFPIHI_00783 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
AMCFPIHI_00784 2.3e-262 pepC 3.4.22.40 E Peptidase C1-like family
AMCFPIHI_00785 1.8e-169 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
AMCFPIHI_00786 2.1e-138 S Protein of unknown function (DUF3710)
AMCFPIHI_00787 1.7e-129 S Protein of unknown function (DUF3159)
AMCFPIHI_00788 4.5e-249 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMCFPIHI_00789 4.4e-109
AMCFPIHI_00790 0.0 ctpE P E1-E2 ATPase
AMCFPIHI_00791 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AMCFPIHI_00793 9.2e-172 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
AMCFPIHI_00794 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
AMCFPIHI_00795 1.1e-53 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
AMCFPIHI_00796 8.5e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AMCFPIHI_00797 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AMCFPIHI_00798 3.2e-135 3.8.1.2 S Haloacid dehalogenase-like hydrolase
AMCFPIHI_00799 1.3e-182 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AMCFPIHI_00800 1.1e-136 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
AMCFPIHI_00801 0.0 arc O AAA ATPase forming ring-shaped complexes
AMCFPIHI_00802 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
AMCFPIHI_00803 2.4e-158 hisN 3.1.3.25 G Inositol monophosphatase family
AMCFPIHI_00804 1.6e-10 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
AMCFPIHI_00805 8.5e-276 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AMCFPIHI_00806 8.1e-42 hup L Belongs to the bacterial histone-like protein family
AMCFPIHI_00807 0.0 S Lysylphosphatidylglycerol synthase TM region
AMCFPIHI_00808 3e-281 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
AMCFPIHI_00809 9.8e-291 S PGAP1-like protein
AMCFPIHI_00811 2.1e-69
AMCFPIHI_00812 2.6e-146 S von Willebrand factor (vWF) type A domain
AMCFPIHI_00813 2.3e-190 S von Willebrand factor (vWF) type A domain
AMCFPIHI_00814 6.4e-94
AMCFPIHI_00815 1.5e-175 S Protein of unknown function DUF58
AMCFPIHI_00816 3e-196 moxR S ATPase family associated with various cellular activities (AAA)
AMCFPIHI_00817 4.2e-144 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AMCFPIHI_00818 1.4e-69 S LytR cell envelope-related transcriptional attenuator
AMCFPIHI_00819 1.9e-43 cspA K 'Cold-shock' DNA-binding domain
AMCFPIHI_00820 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
AMCFPIHI_00821 1.7e-10 S Proteins of 100 residues with WXG
AMCFPIHI_00822 1.6e-168
AMCFPIHI_00823 1.6e-134 KT Response regulator receiver domain protein
AMCFPIHI_00824 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
AMCFPIHI_00825 1e-66 cspB K 'Cold-shock' DNA-binding domain
AMCFPIHI_00826 2.1e-191 S Protein of unknown function (DUF3027)
AMCFPIHI_00827 4.7e-185 uspA T Belongs to the universal stress protein A family
AMCFPIHI_00828 0.0 clpC O ATPase family associated with various cellular activities (AAA)
AMCFPIHI_00832 5.1e-217 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
AMCFPIHI_00833 7.9e-263 hisS 6.1.1.21 J Histidyl-tRNA synthetase
AMCFPIHI_00834 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AMCFPIHI_00835 1.6e-83 K helix_turn_helix, Lux Regulon
AMCFPIHI_00836 2.4e-92 S Aminoacyl-tRNA editing domain
AMCFPIHI_00837 3.6e-140 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
AMCFPIHI_00838 2.8e-146 gluB ET Belongs to the bacterial solute-binding protein 3 family
AMCFPIHI_00839 5.2e-111 gluC E Binding-protein-dependent transport system inner membrane component
AMCFPIHI_00840 3.7e-199 gluD E Binding-protein-dependent transport system inner membrane component
AMCFPIHI_00841 3.9e-193 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
AMCFPIHI_00842 0.0 L DEAD DEAH box helicase
AMCFPIHI_00843 3.2e-256 rarA L Recombination factor protein RarA
AMCFPIHI_00845 5.7e-256 EGP Major facilitator Superfamily
AMCFPIHI_00846 0.0 ecfA GP ABC transporter, ATP-binding protein
AMCFPIHI_00847 1.5e-104 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AMCFPIHI_00849 1.3e-139 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
AMCFPIHI_00850 2e-213 E Aminotransferase class I and II
AMCFPIHI_00851 3.4e-138 bioM P ATPases associated with a variety of cellular activities
AMCFPIHI_00852 5.9e-64 2.8.2.22 S Arylsulfotransferase Ig-like domain
AMCFPIHI_00853 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMCFPIHI_00854 0.0 S Tetratricopeptide repeat
AMCFPIHI_00855 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMCFPIHI_00856 6.3e-210 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
AMCFPIHI_00857 8.8e-161 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
AMCFPIHI_00858 6.9e-286 glnA 6.3.1.2 E glutamine synthetase
AMCFPIHI_00859 2.7e-143 S Domain of unknown function (DUF4191)
AMCFPIHI_00860 8.9e-281 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMCFPIHI_00861 5.5e-104 S Protein of unknown function (DUF3043)
AMCFPIHI_00862 1.2e-258 argE E Peptidase dimerisation domain
AMCFPIHI_00863 3.7e-191 V N-Acetylmuramoyl-L-alanine amidase
AMCFPIHI_00864 3e-153 ytrE V ATPases associated with a variety of cellular activities
AMCFPIHI_00865 3.4e-197
AMCFPIHI_00866 7.4e-231 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
AMCFPIHI_00867 0.0 S Uncharacterised protein family (UPF0182)
AMCFPIHI_00868 6.2e-207 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
AMCFPIHI_00869 0.0 2.7.8.14, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
AMCFPIHI_00870 7.9e-205 I transferase activity, transferring acyl groups other than amino-acyl groups
AMCFPIHI_00872 1.8e-130 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
AMCFPIHI_00873 1.9e-197 GM GDP-mannose 4,6 dehydratase
AMCFPIHI_00874 2.1e-151 GM ABC-2 type transporter
AMCFPIHI_00875 4.9e-145 tagH 3.6.3.38, 3.6.3.40 GM ABC transporter
AMCFPIHI_00876 7.8e-97 2.3.1.183 M Acetyltransferase (GNAT) domain
AMCFPIHI_00877 7.6e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
AMCFPIHI_00878 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AMCFPIHI_00879 1.4e-297 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH chorismate binding enzyme
AMCFPIHI_00880 6.4e-153 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 E branched-chain-amino-acid transaminase activity
AMCFPIHI_00881 6.9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
AMCFPIHI_00882 2.5e-101 divIC D Septum formation initiator
AMCFPIHI_00883 2e-106 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
AMCFPIHI_00884 3.6e-185 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
AMCFPIHI_00886 1.6e-97
AMCFPIHI_00887 2.3e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
AMCFPIHI_00888 2.2e-72 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
AMCFPIHI_00889 7.5e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AMCFPIHI_00891 2.8e-141 yplQ S Haemolysin-III related
AMCFPIHI_00892 1.1e-284 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
AMCFPIHI_00893 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
AMCFPIHI_00894 0.0 D FtsK/SpoIIIE family
AMCFPIHI_00895 1.3e-268 K Cell envelope-related transcriptional attenuator domain
AMCFPIHI_00896 5.8e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
AMCFPIHI_00897 0.0 S Glycosyl transferase, family 2
AMCFPIHI_00898 2.6e-259
AMCFPIHI_00899 6.3e-66 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
AMCFPIHI_00900 4.5e-157 cof 5.2.1.8 T Eukaryotic phosphomannomutase
AMCFPIHI_00901 3.8e-128 ctsW S Phosphoribosyl transferase domain
AMCFPIHI_00902 1.1e-71 rulA 3.4.21.88 KT Peptidase S24-like
AMCFPIHI_00903 1.1e-203 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
AMCFPIHI_00904 7.2e-127 T Response regulator receiver domain protein
AMCFPIHI_00905 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMCFPIHI_00906 5.1e-102 carD K CarD-like/TRCF domain
AMCFPIHI_00907 1.9e-83 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
AMCFPIHI_00908 4.3e-139 znuB U ABC 3 transport family
AMCFPIHI_00909 3.1e-164 znuC P ATPases associated with a variety of cellular activities
AMCFPIHI_00910 6.7e-174 P Zinc-uptake complex component A periplasmic
AMCFPIHI_00911 3.8e-162 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AMCFPIHI_00912 3.3e-243 rpsA J Ribosomal protein S1
AMCFPIHI_00913 2.7e-106 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMCFPIHI_00914 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
AMCFPIHI_00915 1.7e-179 terC P Integral membrane protein, TerC family
AMCFPIHI_00916 6.6e-273 pyk 2.7.1.40 G Pyruvate kinase
AMCFPIHI_00917 1.8e-110 aspA 3.6.1.13 L NUDIX domain
AMCFPIHI_00919 9.2e-120 pdtaR T Response regulator receiver domain protein
AMCFPIHI_00920 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMCFPIHI_00921 1.2e-171 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
AMCFPIHI_00922 3.7e-120 3.6.1.13 L NUDIX domain
AMCFPIHI_00923 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
AMCFPIHI_00924 1.6e-219 ykiI
AMCFPIHI_00926 7.4e-132 L Phage integrase family
AMCFPIHI_00927 4e-110 3.4.13.21 E Peptidase family S51
AMCFPIHI_00928 2.7e-274 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
AMCFPIHI_00929 2.2e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMCFPIHI_00930 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
AMCFPIHI_00931 1.6e-43 L Transposase and inactivated derivatives IS30 family
AMCFPIHI_00932 3.4e-57 L Transposase and inactivated derivatives IS30 family
AMCFPIHI_00933 3.9e-107 L AAA ATPase domain
AMCFPIHI_00934 5.5e-48 recB 3.6.4.12 L UvrD/REP helicase N-terminal domain
AMCFPIHI_00935 1.2e-27
AMCFPIHI_00936 1.3e-12
AMCFPIHI_00937 3.7e-117 S Protein of unknown function (DUF3800)
AMCFPIHI_00938 5.8e-191 S Protein of unknown function DUF262
AMCFPIHI_00940 3e-69 L Integrase core domain
AMCFPIHI_00941 1.1e-30 L Transposase
AMCFPIHI_00942 2.1e-185
AMCFPIHI_00943 1e-24
AMCFPIHI_00944 5.1e-303 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
AMCFPIHI_00945 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
AMCFPIHI_00946 3.4e-189 pit P Phosphate transporter family
AMCFPIHI_00947 1.1e-115 MA20_27875 P Protein of unknown function DUF47
AMCFPIHI_00948 5.7e-121 K helix_turn_helix, Lux Regulon
AMCFPIHI_00949 1.9e-188 T Histidine kinase
AMCFPIHI_00950 1.2e-42 pacL 3.6.3.8, 3.6.3.9 P ATPase, P-type transporting, HAD superfamily, subfamily IC
AMCFPIHI_00951 1e-179 V ATPases associated with a variety of cellular activities
AMCFPIHI_00952 8.1e-227 V ABC-2 family transporter protein
AMCFPIHI_00953 9e-254 V ABC-2 family transporter protein
AMCFPIHI_00954 2e-285 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
AMCFPIHI_00955 2.1e-199 L Transposase and inactivated derivatives IS30 family
AMCFPIHI_00957 1.3e-78
AMCFPIHI_00958 1.2e-64 D MobA/MobL family
AMCFPIHI_00959 8.6e-48 L Transposase
AMCFPIHI_00960 2.2e-09
AMCFPIHI_00961 1e-81 K Winged helix DNA-binding domain
AMCFPIHI_00962 1.8e-301 V ABC transporter, ATP-binding protein
AMCFPIHI_00963 0.0 V ABC transporter transmembrane region
AMCFPIHI_00964 2.2e-81
AMCFPIHI_00965 5.6e-68 XK26_04485 P Cobalt transport protein
AMCFPIHI_00966 1.6e-20 XK26_04485 P Cobalt transport protein
AMCFPIHI_00967 8.4e-306 pepD E Peptidase family C69
AMCFPIHI_00968 0.0 S Glycosyl hydrolases related to GH101 family, GH129
AMCFPIHI_00969 6.6e-198 XK27_01805 M Glycosyltransferase like family 2
AMCFPIHI_00970 7.9e-116 icaR K Bacterial regulatory proteins, tetR family
AMCFPIHI_00972 1.1e-194 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
AMCFPIHI_00973 2.2e-219 amt U Ammonium Transporter Family
AMCFPIHI_00974 1e-54 glnB K Nitrogen regulatory protein P-II
AMCFPIHI_00975 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
AMCFPIHI_00976 2.2e-249 dinF V MatE
AMCFPIHI_00977 1.7e-257 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
AMCFPIHI_00978 1.4e-279 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
AMCFPIHI_00979 7.5e-143 cobQ S CobB/CobQ-like glutamine amidotransferase domain
AMCFPIHI_00980 3.5e-19 S granule-associated protein
AMCFPIHI_00981 0.0 ubiB S ABC1 family
AMCFPIHI_00982 0.0 pacS 3.6.3.54 P E1-E2 ATPase
AMCFPIHI_00983 9.6e-43 csoR S Metal-sensitive transcriptional repressor
AMCFPIHI_00984 2.9e-214 rmuC S RmuC family
AMCFPIHI_00985 1e-128 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AMCFPIHI_00986 7.7e-155 spoU 2.1.1.185 J RNA methyltransferase TrmH family
AMCFPIHI_00987 1e-60 V ABC transporter
AMCFPIHI_00988 6.8e-60 V ABC transporter
AMCFPIHI_00989 4.8e-15 V ABC transporter
AMCFPIHI_00990 6.2e-48 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMCFPIHI_00991 6.4e-290 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
AMCFPIHI_00992 1.4e-286 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMCFPIHI_00993 1.7e-198 2.3.1.57 J Acetyltransferase (GNAT) domain
AMCFPIHI_00994 3.3e-52 S Protein of unknown function (DUF2469)
AMCFPIHI_00995 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
AMCFPIHI_00996 0.0 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AMCFPIHI_00997 6.1e-235 E Aminotransferase class I and II
AMCFPIHI_00998 3.1e-90 lrp_3 K helix_turn_helix ASNC type
AMCFPIHI_00999 4.7e-73 tyrA 5.4.99.5 E Chorismate mutase type II
AMCFPIHI_01000 0.0 S domain protein
AMCFPIHI_01001 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
AMCFPIHI_01002 1.3e-293 E Bacterial extracellular solute-binding proteins, family 5 Middle
AMCFPIHI_01003 1.9e-126 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AMCFPIHI_01004 2e-135 KT Transcriptional regulatory protein, C terminal
AMCFPIHI_01005 1.4e-125
AMCFPIHI_01006 2.2e-102 mntP P Probably functions as a manganese efflux pump
AMCFPIHI_01008 5.2e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AMCFPIHI_01009 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
AMCFPIHI_01010 0.0 K RNA polymerase II activating transcription factor binding
AMCFPIHI_01011 3.9e-44
AMCFPIHI_01013 1.2e-86 L Phage integrase family
AMCFPIHI_01014 9.3e-54 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
AMCFPIHI_01015 9.1e-22 S Bacteriophage holin family
AMCFPIHI_01017 1.9e-28
AMCFPIHI_01018 9.6e-235 NT phage tail tape measure protein
AMCFPIHI_01019 6.9e-14
AMCFPIHI_01020 5.3e-44
AMCFPIHI_01021 2.1e-46
AMCFPIHI_01022 4.4e-26
AMCFPIHI_01023 1.1e-32
AMCFPIHI_01024 2.8e-264 S Caudovirus prohead serine protease
AMCFPIHI_01025 1.4e-193 S Phage portal protein
AMCFPIHI_01026 4.9e-276 S Terminase
AMCFPIHI_01027 4.4e-49
AMCFPIHI_01028 2.4e-130 L HNH endonuclease
AMCFPIHI_01029 3.4e-42
AMCFPIHI_01031 2.8e-28
AMCFPIHI_01035 2e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AMCFPIHI_01036 6e-146 atpB C it plays a direct role in the translocation of protons across the membrane
AMCFPIHI_01038 7.6e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMCFPIHI_01039 2.5e-60 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AMCFPIHI_01040 1.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMCFPIHI_01041 0.0 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AMCFPIHI_01042 2.7e-166 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AMCFPIHI_01043 1.5e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AMCFPIHI_01044 8.7e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
AMCFPIHI_01045 1.2e-131 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
AMCFPIHI_01046 5.9e-146 QT PucR C-terminal helix-turn-helix domain
AMCFPIHI_01047 0.0
AMCFPIHI_01048 1.3e-151 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
AMCFPIHI_01049 4.2e-93 bioY S BioY family
AMCFPIHI_01050 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
AMCFPIHI_01051 7.2e-308 pccB I Carboxyl transferase domain
AMCFPIHI_01052 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
AMCFPIHI_01053 1.1e-98 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
AMCFPIHI_01054 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
AMCFPIHI_01056 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
AMCFPIHI_01057 4e-119
AMCFPIHI_01058 3e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AMCFPIHI_01059 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
AMCFPIHI_01060 5.5e-56 xylR K purine nucleotide biosynthetic process
AMCFPIHI_01061 1.4e-93 lemA S LemA family
AMCFPIHI_01062 0.0 S Predicted membrane protein (DUF2207)
AMCFPIHI_01063 6.6e-73 megL 2.5.1.48, 4.4.1.1, 4.4.1.11, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
AMCFPIHI_01064 1.4e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMCFPIHI_01065 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMCFPIHI_01066 1.5e-98 nrdI F Probably involved in ribonucleotide reductase function
AMCFPIHI_01067 2.2e-41 nrdH O Glutaredoxin
AMCFPIHI_01068 4.6e-168 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
AMCFPIHI_01069 3.1e-36 L Transposase and inactivated derivatives IS30 family
AMCFPIHI_01070 5.4e-144 L Helix-turn-helix domain
AMCFPIHI_01071 0.0 yegQ O Peptidase family U32 C-terminal domain
AMCFPIHI_01072 1.9e-189 yfiH Q Multi-copper polyphenol oxidoreductase laccase
AMCFPIHI_01073 6.5e-145 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
AMCFPIHI_01074 8e-128 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AMCFPIHI_01075 7.6e-46 D nuclear chromosome segregation
AMCFPIHI_01076 5.5e-269 pepC 3.4.22.40 E Peptidase C1-like family
AMCFPIHI_01077 4.6e-167 L Excalibur calcium-binding domain
AMCFPIHI_01078 3.3e-219 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AMCFPIHI_01079 1.2e-244 EGP Major facilitator Superfamily
AMCFPIHI_01080 3e-102 K helix_turn_helix, Arsenical Resistance Operon Repressor
AMCFPIHI_01081 1.7e-240 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AMCFPIHI_01082 1.9e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMCFPIHI_01083 3.6e-244 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
AMCFPIHI_01084 1.3e-128 KT Transcriptional regulatory protein, C terminal
AMCFPIHI_01085 1.4e-169 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
AMCFPIHI_01086 3.8e-171 pstC P probably responsible for the translocation of the substrate across the membrane
AMCFPIHI_01087 5.3e-179 pstA P Phosphate transport system permease
AMCFPIHI_01088 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMCFPIHI_01089 1.1e-169 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
AMCFPIHI_01090 1.4e-12 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
AMCFPIHI_01091 8.8e-222 pbuO S Permease family
AMCFPIHI_01093 0.0 guxA1 3.2.1.18, 3.2.1.91 GH33,GH6 G BNR repeat-like domain
AMCFPIHI_01094 4.1e-181 xynB2 1.1.1.169 E lipolytic protein G-D-S-L family
AMCFPIHI_01095 2.1e-88 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AMCFPIHI_01096 1.3e-37 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
AMCFPIHI_01098 2.1e-246 T Forkhead associated domain
AMCFPIHI_01099 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
AMCFPIHI_01100 9.6e-42
AMCFPIHI_01101 1.6e-109 flgA NO SAF
AMCFPIHI_01102 3.2e-38 fmdB S Putative regulatory protein
AMCFPIHI_01103 1e-119 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
AMCFPIHI_01104 2e-148 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
AMCFPIHI_01105 5e-145
AMCFPIHI_01106 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AMCFPIHI_01107 2.8e-129 bla1 3.5.2.6 V Beta-lactamase enzyme family
AMCFPIHI_01108 9.2e-52 moxR S ATPase family associated with various cellular activities (AAA)
AMCFPIHI_01112 1.9e-25 rpmG J Ribosomal protein L33
AMCFPIHI_01113 1.5e-214 murB 1.3.1.98 M Cell wall formation
AMCFPIHI_01114 9e-61 fdxA C 4Fe-4S binding domain
AMCFPIHI_01115 5.1e-223 dapC E Aminotransferase class I and II
AMCFPIHI_01116 9.6e-239 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMCFPIHI_01118 1.4e-256 M Bacterial capsule synthesis protein PGA_cap
AMCFPIHI_01119 6.2e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
AMCFPIHI_01120 3.3e-119
AMCFPIHI_01121 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
AMCFPIHI_01122 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AMCFPIHI_01123 8.8e-68 rpsI J Belongs to the universal ribosomal protein uS9 family
AMCFPIHI_01124 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
AMCFPIHI_01125 6.7e-234 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
AMCFPIHI_01126 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
AMCFPIHI_01127 3.3e-166 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
AMCFPIHI_01128 1.5e-86 ywiC S YwiC-like protein
AMCFPIHI_01129 3.4e-37 ywiC S YwiC-like protein
AMCFPIHI_01130 3e-14 ywiC S YwiC-like protein
AMCFPIHI_01131 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
AMCFPIHI_01132 4.2e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AMCFPIHI_01133 3.9e-119 rplD J Forms part of the polypeptide exit tunnel
AMCFPIHI_01134 2.6e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
AMCFPIHI_01135 4.2e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AMCFPIHI_01136 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AMCFPIHI_01137 4.3e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AMCFPIHI_01138 7.5e-96 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AMCFPIHI_01139 5.8e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AMCFPIHI_01140 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
AMCFPIHI_01141 3.5e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AMCFPIHI_01142 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AMCFPIHI_01143 3.5e-52 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AMCFPIHI_01144 2.2e-102 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AMCFPIHI_01145 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMCFPIHI_01146 4.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AMCFPIHI_01147 2.1e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AMCFPIHI_01148 1.1e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMCFPIHI_01149 1.5e-100 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AMCFPIHI_01150 1e-24 rpmD J Ribosomal protein L30p/L7e
AMCFPIHI_01151 2.7e-63 rplO J binds to the 23S rRNA
AMCFPIHI_01152 6.8e-248 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
AMCFPIHI_01153 3.8e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
AMCFPIHI_01154 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMCFPIHI_01155 6.5e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
AMCFPIHI_01156 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AMCFPIHI_01157 1.1e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AMCFPIHI_01158 8.9e-184 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMCFPIHI_01159 8.1e-64 rplQ J Ribosomal protein L17
AMCFPIHI_01160 0.0 3.2.1.52 GH20 G hydrolase family 20, catalytic
AMCFPIHI_01161 6.4e-173 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
AMCFPIHI_01162 0.0 gcs2 S A circularly permuted ATPgrasp
AMCFPIHI_01163 5e-153 E Transglutaminase/protease-like homologues
AMCFPIHI_01165 1.7e-33
AMCFPIHI_01166 7.1e-162
AMCFPIHI_01167 4.7e-188 nusA K Participates in both transcription termination and antitermination
AMCFPIHI_01168 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMCFPIHI_01169 4.7e-84 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AMCFPIHI_01170 3.4e-236 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMCFPIHI_01171 8.5e-232 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
AMCFPIHI_01172 1e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AMCFPIHI_01173 1.2e-106
AMCFPIHI_01175 5.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AMCFPIHI_01176 3.8e-204 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMCFPIHI_01177 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
AMCFPIHI_01178 4.4e-261 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMCFPIHI_01179 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AMCFPIHI_01181 2.7e-43 M Spy0128-like isopeptide containing domain
AMCFPIHI_01182 4.4e-42 M Spy0128-like isopeptide containing domain
AMCFPIHI_01183 0.0 crr G pts system, glucose-specific IIABC component
AMCFPIHI_01184 1.3e-151 arbG K CAT RNA binding domain
AMCFPIHI_01185 6.7e-212 I Diacylglycerol kinase catalytic domain
AMCFPIHI_01186 0.0 nucH 3.1.3.5 F 5'-nucleotidase, C-terminal domain
AMCFPIHI_01187 8.9e-229 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AMCFPIHI_01189 0.0 nagLU 3.1.4.53, 3.2.1.21, 3.2.1.50 GH3 G Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
AMCFPIHI_01191 1.1e-79
AMCFPIHI_01192 0.0 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMCFPIHI_01193 4.2e-186 opcA G Glucose-6-phosphate dehydrogenase subunit
AMCFPIHI_01194 2.3e-142 pgl 3.1.1.31 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AMCFPIHI_01195 5.3e-278 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMCFPIHI_01196 9.2e-126 degU K helix_turn_helix, Lux Regulon
AMCFPIHI_01197 8.9e-273 tcsS3 KT PspC domain
AMCFPIHI_01198 4.8e-294 pspC KT PspC domain
AMCFPIHI_01199 7.3e-135
AMCFPIHI_01200 1.5e-112 S Protein of unknown function (DUF4125)
AMCFPIHI_01201 0.0 S Domain of unknown function (DUF4037)
AMCFPIHI_01202 5.6e-217 araJ EGP Major facilitator Superfamily
AMCFPIHI_01204 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
AMCFPIHI_01205 4.3e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
AMCFPIHI_01206 4.9e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMCFPIHI_01207 7.9e-10 EGP Major facilitator Superfamily
AMCFPIHI_01208 1.7e-117 phoU P Plays a role in the regulation of phosphate uptake
AMCFPIHI_01209 1.3e-216 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
AMCFPIHI_01210 2.6e-39
AMCFPIHI_01211 8.5e-215 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AMCFPIHI_01212 2.4e-176 usp 3.5.1.28 CBM50 S CHAP domain
AMCFPIHI_01213 1.7e-105 M NlpC/P60 family
AMCFPIHI_01214 1.6e-191 T Universal stress protein family
AMCFPIHI_01215 1e-72 attW O OsmC-like protein
AMCFPIHI_01216 1.6e-173 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AMCFPIHI_01217 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
AMCFPIHI_01218 1.8e-95 ptpA 3.1.3.48 T low molecular weight
AMCFPIHI_01219 3.7e-196 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
AMCFPIHI_01220 9.4e-23 azlD E Branched-chain amino acid transport protein (AzlD)
AMCFPIHI_01221 9.9e-112 vex2 V ABC transporter, ATP-binding protein
AMCFPIHI_01222 1.2e-211 vex1 V Efflux ABC transporter, permease protein
AMCFPIHI_01223 4.7e-220 vex3 V ABC transporter permease
AMCFPIHI_01225 6.6e-172
AMCFPIHI_01226 7.4e-109 ytrE V ABC transporter
AMCFPIHI_01227 8.3e-177 V N-Acetylmuramoyl-L-alanine amidase
AMCFPIHI_01228 4.8e-101
AMCFPIHI_01229 3.9e-119 K Transcriptional regulatory protein, C terminal
AMCFPIHI_01230 5.2e-229 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AMCFPIHI_01231 1.9e-181 lacR K Transcriptional regulator, LacI family
AMCFPIHI_01232 2.3e-87 nagA 3.5.1.25 G Amidohydrolase family
AMCFPIHI_01233 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
AMCFPIHI_01234 1.7e-268 lacS G Psort location CytoplasmicMembrane, score 10.00
AMCFPIHI_01235 6e-17 S Transcription factor WhiB
AMCFPIHI_01237 8.1e-176 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
AMCFPIHI_01238 6.9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
AMCFPIHI_01239 2.6e-68 S Domain of unknown function (DUF4190)
AMCFPIHI_01242 8.1e-205 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
AMCFPIHI_01243 4.3e-177 3.4.14.13 M Glycosyltransferase like family 2
AMCFPIHI_01244 4.3e-273 S AI-2E family transporter
AMCFPIHI_01245 1.3e-232 epsG M Glycosyl transferase family 21
AMCFPIHI_01246 1.7e-168 natA V ATPases associated with a variety of cellular activities
AMCFPIHI_01247 3.9e-309
AMCFPIHI_01248 7.7e-261 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
AMCFPIHI_01249 5.1e-212 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
AMCFPIHI_01250 9.4e-98 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
AMCFPIHI_01251 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMCFPIHI_01252 4.5e-100 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
AMCFPIHI_01253 2.3e-164 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AMCFPIHI_01254 7.9e-293 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AMCFPIHI_01255 1.3e-77 S Protein of unknown function (DUF3180)
AMCFPIHI_01256 2.1e-171 tesB I Thioesterase-like superfamily
AMCFPIHI_01257 0.0 3.2.1.52, 3.2.1.83 GH16,GH20 G hydrolase family 20, catalytic
AMCFPIHI_01258 2.4e-306 yjjK S ATP-binding cassette protein, ChvD family
AMCFPIHI_01259 4e-19 M domain, Protein
AMCFPIHI_01260 1.3e-162 M domain, Protein
AMCFPIHI_01261 2e-126
AMCFPIHI_01262 4.4e-115 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AMCFPIHI_01263 6.3e-17 S Protein of unknown function (DUF979)
AMCFPIHI_01264 1.3e-55 S DUF218 domain
AMCFPIHI_01266 1.9e-112 S Pyridoxamine 5'-phosphate oxidase
AMCFPIHI_01267 1.3e-159 I alpha/beta hydrolase fold
AMCFPIHI_01268 1e-46 EGP Major facilitator Superfamily
AMCFPIHI_01269 9.2e-300 S ATPases associated with a variety of cellular activities
AMCFPIHI_01270 3.7e-179 glkA 2.7.1.2 G ROK family
AMCFPIHI_01271 5.9e-77 EGP Major facilitator superfamily
AMCFPIHI_01272 9.3e-36 1.1.1.122, 1.1.1.65 C Aldo/keto reductase family
AMCFPIHI_01273 3.4e-252 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
AMCFPIHI_01274 1.3e-215 MA20_36090 S Psort location Cytoplasmic, score 8.87
AMCFPIHI_01275 1.9e-26 L Transposase
AMCFPIHI_01277 5.2e-148 S Sulfite exporter TauE/SafE
AMCFPIHI_01278 1.1e-140 V FtsX-like permease family
AMCFPIHI_01280 4.2e-164 EG EamA-like transporter family
AMCFPIHI_01281 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
AMCFPIHI_01282 1.2e-141 3.5.2.6 V Beta-lactamase enzyme family
AMCFPIHI_01283 8.3e-170 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
AMCFPIHI_01284 1.2e-104
AMCFPIHI_01285 3.5e-257 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
AMCFPIHI_01286 1.2e-178 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, C-terminal alpha/beta domain
AMCFPIHI_01287 2.6e-163 glcU G Sugar transport protein
AMCFPIHI_01288 6e-188 K helix_turn_helix, arabinose operon control protein
AMCFPIHI_01290 3.9e-36 rpmE J Binds the 23S rRNA
AMCFPIHI_01291 1.4e-187 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AMCFPIHI_01292 3.6e-185 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
AMCFPIHI_01293 3.3e-48 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
AMCFPIHI_01294 5.2e-116 ywlC 2.7.7.87 J Belongs to the SUA5 family
AMCFPIHI_01295 8e-192 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
AMCFPIHI_01296 3.5e-288 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
AMCFPIHI_01297 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
AMCFPIHI_01298 1.9e-36 KT Transcriptional regulatory protein, C terminal
AMCFPIHI_01299 6.3e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
AMCFPIHI_01300 1.5e-160 supH S Sucrose-6F-phosphate phosphohydrolase
AMCFPIHI_01301 1e-270 recD2 3.6.4.12 L PIF1-like helicase
AMCFPIHI_01304 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
AMCFPIHI_01305 2.4e-170
AMCFPIHI_01306 6.9e-116 L Single-strand binding protein family
AMCFPIHI_01307 0.0 pepO 3.4.24.71 O Peptidase family M13
AMCFPIHI_01308 3.1e-127 S Short repeat of unknown function (DUF308)
AMCFPIHI_01309 1.1e-149 map 3.4.11.18 E Methionine aminopeptidase
AMCFPIHI_01310 1.1e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
AMCFPIHI_01311 5.1e-101 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
AMCFPIHI_01312 7.8e-196 yghZ C Aldo/keto reductase family
AMCFPIHI_01313 5.7e-55 racA K MerR, DNA binding
AMCFPIHI_01314 0.0 ctpE P E1-E2 ATPase
AMCFPIHI_01315 3e-112 macB_2 V ATPases associated with a variety of cellular activities
AMCFPIHI_01316 1.2e-225 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
AMCFPIHI_01317 4.7e-260 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
AMCFPIHI_01318 1.7e-232 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
AMCFPIHI_01319 2.2e-243 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
AMCFPIHI_01320 3.5e-126 XK27_08050 O prohibitin homologues
AMCFPIHI_01321 3.2e-275 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
AMCFPIHI_01322 5e-55 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
AMCFPIHI_01323 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AMCFPIHI_01325 0.0 3.2.1.51 GH29 G Alpha-L-fucosidase
AMCFPIHI_01326 2.2e-20 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AMCFPIHI_01327 2.9e-190 K Periplasmic binding protein domain
AMCFPIHI_01328 9e-127 G ABC transporter permease
AMCFPIHI_01329 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
AMCFPIHI_01330 3.3e-62 G carbohydrate transport
AMCFPIHI_01331 2e-277 G Bacterial extracellular solute-binding protein
AMCFPIHI_01332 3.6e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
AMCFPIHI_01333 4.6e-310 E ABC transporter, substrate-binding protein, family 5
AMCFPIHI_01334 5.5e-170 P Binding-protein-dependent transport system inner membrane component
AMCFPIHI_01335 8.4e-163 EP Binding-protein-dependent transport system inner membrane component
AMCFPIHI_01336 4e-142 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
AMCFPIHI_01337 9.8e-155 sapF E ATPases associated with a variety of cellular activities
AMCFPIHI_01338 7e-189 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMCFPIHI_01339 2.8e-164 tnp7109-2 L PFAM Transposase, Mutator family
AMCFPIHI_01340 1.9e-33 L Psort location Cytoplasmic, score 8.87
AMCFPIHI_01341 6e-58 S pathogenesis
AMCFPIHI_01342 3.6e-69
AMCFPIHI_01345 5.7e-88 topB 5.99.1.2 L DNA topoisomerase
AMCFPIHI_01347 1.7e-85 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
AMCFPIHI_01348 1.3e-57 2.7.1.2 GK ROK family
AMCFPIHI_01349 7.3e-110 M1-530 S Protein of unknown function (DUF4127)
AMCFPIHI_01350 7.1e-94 lacG G Binding-protein-dependent transport system inner membrane component
AMCFPIHI_01351 7.7e-144 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
AMCFPIHI_01352 1.5e-305 EGP Major facilitator Superfamily
AMCFPIHI_01353 5.5e-226 mntH P H( )-stimulated, divalent metal cation uptake system
AMCFPIHI_01354 2.9e-122 L Protein of unknown function (DUF1524)
AMCFPIHI_01355 5.5e-169 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
AMCFPIHI_01356 9.7e-11 E Domain of unknown function (DUF5011)
AMCFPIHI_01357 2.2e-202 K helix_turn _helix lactose operon repressor
AMCFPIHI_01358 6.5e-107 G Glycosyl hydrolases family 43
AMCFPIHI_01359 1e-171 G Glycosyl hydrolases family 43
AMCFPIHI_01362 4.8e-111 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
AMCFPIHI_01363 6.9e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
AMCFPIHI_01364 0.0 fadD 6.2.1.3 I AMP-binding enzyme
AMCFPIHI_01366 6e-202 K helix_turn _helix lactose operon repressor
AMCFPIHI_01367 2.5e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMCFPIHI_01368 4.4e-157 lepB 3.4.21.89 U Belongs to the peptidase S26 family
AMCFPIHI_01369 5.6e-62 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
AMCFPIHI_01370 1.1e-129 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
AMCFPIHI_01371 3.1e-172 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
AMCFPIHI_01372 2.3e-292 2.7.1.53 G FGGY family of carbohydrate kinases, C-terminal domain
AMCFPIHI_01373 8.8e-213 gatC G PTS system sugar-specific permease component
AMCFPIHI_01374 4e-173 K Putative sugar-binding domain
AMCFPIHI_01375 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
AMCFPIHI_01376 1e-276 abcT3 P ATPases associated with a variety of cellular activities
AMCFPIHI_01377 6.9e-24 mgtA 3.6.3.2 P Cation transporting ATPase, C-terminus
AMCFPIHI_01378 0.0 mgtA 3.6.3.2 P Cation transporting ATPase, C-terminus
AMCFPIHI_01379 3e-120 mgtC S MgtC family
AMCFPIHI_01381 5.4e-170
AMCFPIHI_01382 3.5e-19
AMCFPIHI_01384 1.5e-190
AMCFPIHI_01385 0.0 pgi 5.3.1.9 G Belongs to the GPI family
AMCFPIHI_01388 4.9e-174 S Auxin Efflux Carrier
AMCFPIHI_01389 1.7e-117 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AMCFPIHI_01390 2.1e-134 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AMCFPIHI_01391 5.7e-247 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMCFPIHI_01392 5.6e-15 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMCFPIHI_01393 7.6e-92 ilvN 2.2.1.6 E ACT domain
AMCFPIHI_01394 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
AMCFPIHI_01395 6.1e-140 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
AMCFPIHI_01396 2.3e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
AMCFPIHI_01397 1.1e-112 yceD S Uncharacterized ACR, COG1399
AMCFPIHI_01398 3.6e-107
AMCFPIHI_01399 2.4e-89 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AMCFPIHI_01400 2e-58 S Protein of unknown function (DUF3039)
AMCFPIHI_01401 0.0 yjjK S ABC transporter
AMCFPIHI_01402 2.3e-136 guaA1 6.3.5.2 F Peptidase C26
AMCFPIHI_01403 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
AMCFPIHI_01404 1.4e-164 P Cation efflux family
AMCFPIHI_01405 1.6e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AMCFPIHI_01406 4.1e-220 S Endonuclease/Exonuclease/phosphatase family
AMCFPIHI_01407 1.3e-93 argO S LysE type translocator
AMCFPIHI_01408 2.9e-295 ydfD EK Alanine-glyoxylate amino-transferase
AMCFPIHI_01409 1e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
AMCFPIHI_01410 1.8e-34 CP_0960 S Belongs to the UPF0109 family
AMCFPIHI_01411 1.3e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMCFPIHI_01412 2.6e-167 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
AMCFPIHI_01413 3.8e-81 hsp20 O Hsp20/alpha crystallin family
AMCFPIHI_01414 6.3e-108 XK27_02070 S Nitroreductase family
AMCFPIHI_01415 6.4e-120 rsmD 2.1.1.171 L Conserved hypothetical protein 95
AMCFPIHI_01416 5.8e-249 U Sodium:dicarboxylate symporter family
AMCFPIHI_01417 0.0
AMCFPIHI_01420 4.5e-220 steT E amino acid
AMCFPIHI_01421 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
AMCFPIHI_01422 1.4e-29 rpmB J Ribosomal L28 family
AMCFPIHI_01423 6.5e-201 yegV G pfkB family carbohydrate kinase
AMCFPIHI_01425 6.6e-243 yxiO S Vacuole effluxer Atg22 like
AMCFPIHI_01426 2e-132 K helix_turn_helix, mercury resistance
AMCFPIHI_01427 2.6e-17 T Toxic component of a toxin-antitoxin (TA) module
AMCFPIHI_01428 3.7e-54 relB L RelB antitoxin
AMCFPIHI_01429 3e-237 K Helix-turn-helix XRE-family like proteins
AMCFPIHI_01430 8.5e-128 tam 2.1.1.144, 2.1.1.197 S Methyltransferase domain
AMCFPIHI_01435 1.2e-31
AMCFPIHI_01436 3.5e-07 S Scramblase
AMCFPIHI_01437 0.0 fadD 6.2.1.3 I AMP-binding enzyme
AMCFPIHI_01439 1.3e-64 M Belongs to the glycosyl hydrolase 28 family
AMCFPIHI_01440 2.1e-232 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
AMCFPIHI_01441 6.3e-59 MA20_36090 S Psort location Cytoplasmic, score 8.87
AMCFPIHI_01442 8.1e-69 MA20_36090 S Psort location Cytoplasmic, score 8.87
AMCFPIHI_01443 3.8e-119 K Bacterial regulatory proteins, tetR family
AMCFPIHI_01444 3.6e-132 M Mechanosensitive ion channel
AMCFPIHI_01445 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
AMCFPIHI_01446 1e-29 2.1.1.72 S Protein conserved in bacteria
AMCFPIHI_01447 2.4e-155 fahA Q Fumarylacetoacetate (FAA) hydrolase family
AMCFPIHI_01448 8.5e-60 S Domain of unknown function (DUF4854)
AMCFPIHI_01449 5.2e-215 3.4.22.70 M Sortase family
AMCFPIHI_01450 8.7e-282 M LPXTG cell wall anchor motif
AMCFPIHI_01451 0.0 inlJ M domain protein
AMCFPIHI_01452 3.6e-53 acyP 3.6.1.7 C Acylphosphatase
AMCFPIHI_01453 2.2e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AMCFPIHI_01454 5.4e-186 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
AMCFPIHI_01455 1.5e-128 M Protein of unknown function (DUF3152)
AMCFPIHI_01456 3.7e-131 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
AMCFPIHI_01458 1.5e-68 E Domain of unknown function (DUF5011)
AMCFPIHI_01459 2e-27 S Parallel beta-helix repeats
AMCFPIHI_01460 4.6e-16 S Parallel beta-helix repeats
AMCFPIHI_01462 6.6e-70 rplI J Binds to the 23S rRNA
AMCFPIHI_01463 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AMCFPIHI_01464 1.1e-79 ssb1 L Single-stranded DNA-binding protein
AMCFPIHI_01465 6.1e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
AMCFPIHI_01466 3.6e-162 T Pfam Adenylate and Guanylate cyclase catalytic domain
AMCFPIHI_01467 1.9e-119
AMCFPIHI_01468 0.0 ftsK 2.7.11.1, 2.7.7.7, 3.4.21.110, 4.2.1.2 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AMCFPIHI_01469 6.9e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMCFPIHI_01470 0.0 3.2.1.97 GH101 G Glycosyl hydrolase 101 beta sandwich domain
AMCFPIHI_01471 7e-200 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
AMCFPIHI_01472 2.2e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
AMCFPIHI_01473 2.5e-178 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AMCFPIHI_01474 2.8e-173 plsC2 2.3.1.51 I Phosphate acyltransferases
AMCFPIHI_01475 2.1e-117 nusG K Participates in transcription elongation, termination and antitermination
AMCFPIHI_01476 4.7e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
AMCFPIHI_01478 9e-231 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
AMCFPIHI_01479 4.1e-201 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AMCFPIHI_01480 1.1e-298 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMCFPIHI_01481 3.1e-214 K Psort location Cytoplasmic, score
AMCFPIHI_01482 3.1e-40 rpmA J Ribosomal L27 protein
AMCFPIHI_01483 3.2e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
AMCFPIHI_01484 0.0 rne 3.1.26.12 J Ribonuclease E/G family
AMCFPIHI_01485 6.4e-240 dapE 3.5.1.18 E Peptidase dimerisation domain
AMCFPIHI_01486 4.2e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
AMCFPIHI_01487 3.3e-256 V Efflux ABC transporter, permease protein
AMCFPIHI_01488 2.4e-164 V ATPases associated with a variety of cellular activities
AMCFPIHI_01489 6.1e-58
AMCFPIHI_01490 2.7e-64
AMCFPIHI_01491 5.8e-277 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
AMCFPIHI_01492 1e-187 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
AMCFPIHI_01493 2.3e-240 hom 1.1.1.3 E Homoserine dehydrogenase
AMCFPIHI_01494 2.9e-290 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
AMCFPIHI_01495 1.9e-81 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AMCFPIHI_01496 8.8e-306 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
AMCFPIHI_01497 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
AMCFPIHI_01498 1.2e-180 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
AMCFPIHI_01499 5.2e-63 psp1 3.5.99.10 J Endoribonuclease L-PSP
AMCFPIHI_01500 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
AMCFPIHI_01502 5.7e-163 IQ KR domain
AMCFPIHI_01503 6.8e-67 4.2.1.68 M Enolase C-terminal domain-like
AMCFPIHI_01504 1e-16 4.2.1.68 M carboxylic acid catabolic process
AMCFPIHI_01505 1.4e-184 K Bacterial regulatory proteins, lacI family
AMCFPIHI_01507 1.5e-117 cyaA 4.6.1.1 S CYTH
AMCFPIHI_01508 3.6e-161 trxA2 O Tetratricopeptide repeat
AMCFPIHI_01509 1e-179
AMCFPIHI_01510 5.4e-187
AMCFPIHI_01511 3.4e-167 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
AMCFPIHI_01512 6.1e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
AMCFPIHI_01513 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMCFPIHI_01514 1.2e-126
AMCFPIHI_01515 7.3e-132 K Bacterial regulatory proteins, tetR family
AMCFPIHI_01516 5.7e-226 G Transmembrane secretion effector
AMCFPIHI_01517 9.8e-255 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AMCFPIHI_01518 2.3e-220 pyrD 1.3.1.14 F Dihydroorotate dehydrogenase
AMCFPIHI_01519 1.9e-182 S CAAX protease self-immunity
AMCFPIHI_01521 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
AMCFPIHI_01522 3.8e-133 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AMCFPIHI_01523 6.5e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AMCFPIHI_01524 2.8e-138 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
AMCFPIHI_01525 1.7e-251 S Calcineurin-like phosphoesterase
AMCFPIHI_01528 1.1e-65 S Domain of unknown function (DUF4143)
AMCFPIHI_01529 8e-99 S Domain of unknown function (DUF4143)
AMCFPIHI_01530 1.8e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMCFPIHI_01532 2.9e-122 S HAD hydrolase, family IA, variant 3
AMCFPIHI_01533 8.6e-201 P NMT1/THI5 like
AMCFPIHI_01534 5.8e-138 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
AMCFPIHI_01535 2.4e-143
AMCFPIHI_01536 1.1e-126 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
AMCFPIHI_01537 1.8e-262 EGP Major facilitator Superfamily
AMCFPIHI_01538 1.2e-97 S GtrA-like protein
AMCFPIHI_01539 1.3e-62 S Macrophage migration inhibitory factor (MIF)
AMCFPIHI_01540 1e-285 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
AMCFPIHI_01541 0.0 pepD E Peptidase family C69
AMCFPIHI_01542 1.3e-107 S Phosphatidylethanolamine-binding protein
AMCFPIHI_01543 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
AMCFPIHI_01544 0.0 lmrA2 V ABC transporter transmembrane region
AMCFPIHI_01545 0.0 lmrA1 V ABC transporter, ATP-binding protein
AMCFPIHI_01546 5.9e-94 ydgJ K helix_turn_helix multiple antibiotic resistance protein
AMCFPIHI_01547 9.2e-43 S Protein of unknown function (DUF1778)
AMCFPIHI_01548 2.2e-190 1.1.1.65 C Aldo/keto reductase family
AMCFPIHI_01549 1.4e-94 M Belongs to the glycosyl hydrolase 30 family
AMCFPIHI_01551 2.2e-24 L Integrase core domain protein
AMCFPIHI_01552 7.9e-67 L IstB-like ATP binding protein
AMCFPIHI_01553 3.2e-53 L IstB-like ATP binding protein
AMCFPIHI_01554 2.6e-200 L PFAM Integrase catalytic
AMCFPIHI_01555 8.5e-23 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
AMCFPIHI_01556 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
AMCFPIHI_01557 4.2e-148 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AMCFPIHI_01558 4.1e-39 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AMCFPIHI_01559 2.1e-23 L Transposase, Mutator family
AMCFPIHI_01560 9.1e-82
AMCFPIHI_01561 8.1e-99 L Restriction endonuclease NotI
AMCFPIHI_01563 1.7e-45
AMCFPIHI_01564 2.1e-41 XAC3035 O Glutaredoxin
AMCFPIHI_01565 2.1e-150 S Virulence factor BrkB
AMCFPIHI_01566 7.6e-100 bcp 1.11.1.15 O Redoxin
AMCFPIHI_01567 1.2e-39 E ABC transporter
AMCFPIHI_01568 3e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AMCFPIHI_01569 8.6e-84 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AMCFPIHI_01570 0.0 V FtsX-like permease family
AMCFPIHI_01571 2.6e-129 V ABC transporter
AMCFPIHI_01572 2.4e-101 K Transcriptional regulator C-terminal region
AMCFPIHI_01573 2.2e-260 aroP E aromatic amino acid transport protein AroP K03293
AMCFPIHI_01574 0.0 lacZ 3.2.1.23 G Psort location Cytoplasmic, score 8.87
AMCFPIHI_01576 3e-184 gmk 1.1.1.23, 2.7.4.8 S Protein of unknown function (DUF559)
AMCFPIHI_01577 1.8e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AMCFPIHI_01578 2.8e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AMCFPIHI_01579 8.6e-254 yhjE EGP Sugar (and other) transporter
AMCFPIHI_01580 1.6e-297 scrT G Transporter major facilitator family protein
AMCFPIHI_01581 1.8e-77 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
AMCFPIHI_01582 8.4e-193 K helix_turn _helix lactose operon repressor
AMCFPIHI_01583 1.5e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMCFPIHI_01584 3.7e-163 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMCFPIHI_01585 1.9e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AMCFPIHI_01586 3.3e-200 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
AMCFPIHI_01587 1.2e-252 3.5.1.104 G Polysaccharide deacetylase
AMCFPIHI_01588 4.9e-57 K Cro/C1-type HTH DNA-binding domain
AMCFPIHI_01589 2e-12 E IrrE N-terminal-like domain
AMCFPIHI_01590 3.9e-50 E IrrE N-terminal-like domain
AMCFPIHI_01591 6.8e-65
AMCFPIHI_01592 1.9e-61
AMCFPIHI_01593 9.2e-139 S Domain of unknown function (DUF4417)
AMCFPIHI_01594 8.4e-43 S Bacterial mobilisation protein (MobC)
AMCFPIHI_01595 0.0 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
AMCFPIHI_01597 3.9e-173 htpX O Belongs to the peptidase M48B family
AMCFPIHI_01598 2.5e-272 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
AMCFPIHI_01599 0.0 cadA P E1-E2 ATPase
AMCFPIHI_01600 1.1e-243 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
AMCFPIHI_01601 4.9e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
AMCFPIHI_01603 4.1e-86 yjcF Q Acetyltransferase (GNAT) domain
AMCFPIHI_01604 1.3e-156 I Serine aminopeptidase, S33
AMCFPIHI_01605 2.7e-52 ybjQ S Putative heavy-metal-binding
AMCFPIHI_01606 3.3e-41 D DivIVA domain protein
AMCFPIHI_01607 6e-91 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
AMCFPIHI_01608 0.0 KL Domain of unknown function (DUF3427)
AMCFPIHI_01610 1.3e-195 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMCFPIHI_01612 3.4e-103
AMCFPIHI_01613 6.2e-166 yicL EG EamA-like transporter family
AMCFPIHI_01614 4.6e-207 pldB 3.1.1.5 I Serine aminopeptidase, S33
AMCFPIHI_01615 0.0 pip S YhgE Pip domain protein
AMCFPIHI_01616 0.0 pip S YhgE Pip domain protein
AMCFPIHI_01617 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
AMCFPIHI_01618 1e-130 fhaA T Protein of unknown function (DUF2662)
AMCFPIHI_01619 7.9e-94 fhaB T Inner membrane component of T3SS, cytoplasmic domain
AMCFPIHI_01620 4.8e-259 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
AMCFPIHI_01621 3.6e-266 rodA D Belongs to the SEDS family
AMCFPIHI_01622 1.7e-263 pbpA M penicillin-binding protein
AMCFPIHI_01623 2e-183 T Protein tyrosine kinase
AMCFPIHI_01624 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
AMCFPIHI_01625 3.4e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
AMCFPIHI_01626 2.6e-233 srtA 3.4.22.70 M Sortase family
AMCFPIHI_01627 3.5e-143 S Bacterial protein of unknown function (DUF881)
AMCFPIHI_01628 2.6e-71 crgA D Involved in cell division
AMCFPIHI_01629 6.1e-257 L ribosomal rna small subunit methyltransferase
AMCFPIHI_01630 2.7e-227 xerC_1 L Belongs to the 'phage' integrase family
AMCFPIHI_01631 3.8e-192 L Phage integrase family
AMCFPIHI_01632 7.7e-202 L Phage integrase, N-terminal SAM-like domain
AMCFPIHI_01633 1.3e-16 L HTH-like domain
AMCFPIHI_01634 5.4e-144 gluP 3.4.21.105 S Rhomboid family
AMCFPIHI_01635 7.6e-35
AMCFPIHI_01636 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
AMCFPIHI_01637 4.4e-73 I Sterol carrier protein
AMCFPIHI_01638 8.5e-44 V ATPases associated with a variety of cellular activities
AMCFPIHI_01639 1.4e-43 L Transposase
AMCFPIHI_01640 3.8e-09 L IstB-like ATP binding protein
AMCFPIHI_01641 1.1e-42 tnp7109-21 L Integrase core domain
AMCFPIHI_01642 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
AMCFPIHI_01643 4.5e-12
AMCFPIHI_01644 8.3e-16 yccF S Inner membrane component domain
AMCFPIHI_01645 2.2e-257 S Domain of unknown function (DUF4143)
AMCFPIHI_01646 2.7e-62 tnp7109-21 L Integrase core domain
AMCFPIHI_01647 4.8e-307 3.6.4.12 K Putative DNA-binding domain
AMCFPIHI_01648 3.5e-96
AMCFPIHI_01649 7.5e-09 G Acyltransferase family
AMCFPIHI_01651 1.6e-25 tnp7109-21 L Integrase core domain
AMCFPIHI_01652 6.4e-113 M Glycosyltransferase like family 2
AMCFPIHI_01653 3.8e-78 rfbN GT2 M Glycosyl transferase family 2
AMCFPIHI_01654 1.1e-111 wbbX GT2,GT4 M transferase activity, transferring glycosyl groups
AMCFPIHI_01655 9.6e-92 M Polysaccharide pyruvyl transferase
AMCFPIHI_01656 2.9e-107 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
AMCFPIHI_01657 2.9e-76 rgpC GM Transport permease protein
AMCFPIHI_01658 2.8e-160 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AMCFPIHI_01659 5.6e-256 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
AMCFPIHI_01660 1e-198 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
AMCFPIHI_01661 2.3e-72 tnp3514b L Winged helix-turn helix
AMCFPIHI_01662 8.2e-85 L IstB-like ATP binding protein
AMCFPIHI_01663 2.6e-277 L PFAM Integrase catalytic
AMCFPIHI_01664 1e-17 tnp3514b L Winged helix-turn helix
AMCFPIHI_01666 4.3e-115 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
AMCFPIHI_01667 7.9e-136
AMCFPIHI_01668 1.5e-17 S Protein of unknown function (DUF3847)
AMCFPIHI_01669 4.9e-50 D MobA MobL family protein
AMCFPIHI_01670 3.2e-09 L Transposase
AMCFPIHI_01671 1.4e-182 L Transposase
AMCFPIHI_01672 2.8e-126 L IstB-like ATP binding protein
AMCFPIHI_01673 4.4e-37
AMCFPIHI_01674 1e-237 5.4.99.9 H Flavin containing amine oxidoreductase
AMCFPIHI_01675 1.5e-213 lytC 2.1.1.197, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
AMCFPIHI_01676 2.7e-29 I transferase activity, transferring acyl groups other than amino-acyl groups
AMCFPIHI_01677 1.1e-202 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
AMCFPIHI_01678 6.6e-80 T protein histidine kinase activity
AMCFPIHI_01679 5.2e-87 K LytTr DNA-binding domain
AMCFPIHI_01680 1e-47 S Protein of unknown function (DUF3073)
AMCFPIHI_01681 6.5e-204 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
AMCFPIHI_01682 1.8e-195 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
AMCFPIHI_01683 5.6e-56 S Amidohydrolase family
AMCFPIHI_01684 1.6e-154 S Amidohydrolase family
AMCFPIHI_01685 0.0 yjjP S Threonine/Serine exporter, ThrE
AMCFPIHI_01686 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AMCFPIHI_01687 1.1e-237 yhjX EGP Major facilitator Superfamily
AMCFPIHI_01688 1.9e-308 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
AMCFPIHI_01689 0.0 trxB1 1.8.1.9 C Thioredoxin domain
AMCFPIHI_01690 2.9e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
AMCFPIHI_01691 6.9e-119 cah 4.2.1.1 P Reversible hydration of carbon dioxide
AMCFPIHI_01692 1.1e-95 K helix_turn _helix lactose operon repressor
AMCFPIHI_01693 3.6e-241 ytfL P Transporter associated domain
AMCFPIHI_01694 4.9e-188 yddG EG EamA-like transporter family
AMCFPIHI_01695 1.9e-83 dps P Belongs to the Dps family
AMCFPIHI_01696 4.3e-135 S Protein of unknown function DUF45
AMCFPIHI_01697 6.1e-261 ulaA 2.7.1.194 S PTS system sugar-specific permease component
AMCFPIHI_01698 3.3e-40 ulaC 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
AMCFPIHI_01699 8.6e-78 ulaC 2.7.1.194, 2.7.1.197, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AMCFPIHI_01700 2.2e-188 K helix_turn _helix lactose operon repressor
AMCFPIHI_01701 0.0 G Glycosyl hydrolase family 20, domain 2
AMCFPIHI_01704 0.0 3.2.1.55 GH51 G arabinose metabolic process
AMCFPIHI_01705 2.5e-50 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
AMCFPIHI_01706 7.9e-97 gntR K FCD
AMCFPIHI_01707 2.3e-259 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
AMCFPIHI_01709 6.4e-184 L Phage integrase family
AMCFPIHI_01711 2.7e-227
AMCFPIHI_01712 2.6e-185 pstIR 2.1.1.72, 3.1.21.4 L BsuBI/PstI restriction endonuclease C-terminus
AMCFPIHI_01713 5.1e-270 hsdBM 2.1.1.72 L Eco57I restriction-modification methylase
AMCFPIHI_01714 6.6e-114 L Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AMCFPIHI_01715 9.6e-42 S Protein of unknown function (DUF2442)
AMCFPIHI_01716 1.4e-08 K helix_turn _helix lactose operon repressor
AMCFPIHI_01717 2.3e-228 I Serine aminopeptidase, S33
AMCFPIHI_01718 2.7e-187 K Periplasmic binding protein domain
AMCFPIHI_01719 4.6e-187 G Glycosyl hydrolases family 43
AMCFPIHI_01720 6.3e-21 abfA1 3.2.1.55 GH51 G arabinose metabolic process
AMCFPIHI_01721 4.6e-73 S Transmembrane domain of unknown function (DUF3566)
AMCFPIHI_01722 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMCFPIHI_01723 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMCFPIHI_01724 9.5e-88 S Protein of unknown function (DUF721)
AMCFPIHI_01725 8.8e-240 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMCFPIHI_01726 6e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
AMCFPIHI_01727 1.3e-298 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AMCFPIHI_01728 4.5e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
AMCFPIHI_01729 1e-171 yidC U Membrane protein insertase, YidC Oxa1 family
AMCFPIHI_01730 5e-93 jag S Putative single-stranded nucleic acids-binding domain
AMCFPIHI_01731 3.5e-126 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
AMCFPIHI_01732 3.8e-179 parA D CobQ CobB MinD ParA nucleotide binding domain protein
AMCFPIHI_01733 4e-243 parB K Belongs to the ParB family
AMCFPIHI_01734 2.6e-203 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
AMCFPIHI_01735 0.0 murJ KLT MviN-like protein
AMCFPIHI_01736 0.0 M Conserved repeat domain
AMCFPIHI_01737 5.2e-124 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
AMCFPIHI_01738 2.8e-279 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
AMCFPIHI_01739 2e-112 S LytR cell envelope-related transcriptional attenuator
AMCFPIHI_01740 1e-166 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AMCFPIHI_01741 6.3e-171 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
AMCFPIHI_01742 1.3e-210 S G5
AMCFPIHI_01744 4.2e-150 O Thioredoxin
AMCFPIHI_01745 0.0 KLT Protein tyrosine kinase
AMCFPIHI_01746 4.5e-174 K Psort location Cytoplasmic, score
AMCFPIHI_01747 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
AMCFPIHI_01748 9.5e-103 L Helix-turn-helix domain
AMCFPIHI_01749 0.0 S LPXTG-motif cell wall anchor domain protein
AMCFPIHI_01750 1.1e-244 M LPXTG-motif cell wall anchor domain protein
AMCFPIHI_01751 3.8e-179 3.4.22.70 M Sortase family
AMCFPIHI_01752 5.7e-155
AMCFPIHI_01753 1e-270 KLT Domain of unknown function (DUF4032)
AMCFPIHI_01754 9.9e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMCFPIHI_01756 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
AMCFPIHI_01757 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
AMCFPIHI_01758 5.3e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
AMCFPIHI_01759 0.0 yjcE P Sodium/hydrogen exchanger family
AMCFPIHI_01760 1e-144 ypfH S Phospholipase/Carboxylesterase
AMCFPIHI_01761 1.1e-83 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
AMCFPIHI_01762 2.2e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
AMCFPIHI_01763 6.8e-144 cobB2 K Sir2 family
AMCFPIHI_01764 2.2e-42 L Psort location Cytoplasmic, score 8.87
AMCFPIHI_01765 2.1e-88 E IrrE N-terminal-like domain
AMCFPIHI_01767 2.1e-162 S Sucrose-6F-phosphate phosphohydrolase
AMCFPIHI_01768 4.6e-241 S Putative ABC-transporter type IV
AMCFPIHI_01769 7e-81
AMCFPIHI_01770 2.2e-32 Q phosphatase activity
AMCFPIHI_01771 4e-294 bglA 3.2.1.86 GT1 G Glycosyl hydrolase family 1
AMCFPIHI_01772 7.5e-39 celC 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
AMCFPIHI_01773 4.3e-49 celA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
AMCFPIHI_01774 2.1e-249 gmuC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMCFPIHI_01775 3.2e-68 S haloacid dehalogenase-like hydrolase
AMCFPIHI_01776 3.6e-131 yydK K UTRA
AMCFPIHI_01777 1.3e-70 S FMN_bind
AMCFPIHI_01778 5.7e-149 macB V ABC transporter, ATP-binding protein
AMCFPIHI_01779 2.6e-204 Z012_06715 V FtsX-like permease family
AMCFPIHI_01780 4.8e-222 macB_2 V ABC transporter permease
AMCFPIHI_01781 9.2e-234 S Predicted membrane protein (DUF2318)
AMCFPIHI_01782 6.4e-109 tpd P Fe2+ transport protein
AMCFPIHI_01783 3e-307 efeU_1 P Iron permease FTR1 family
AMCFPIHI_01784 5.9e-22 G MFS/sugar transport protein
AMCFPIHI_01785 1.1e-200 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
AMCFPIHI_01786 5.4e-57 S Fic/DOC family
AMCFPIHI_01787 1.2e-32 S Fic/DOC family
AMCFPIHI_01788 3.6e-291 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMCFPIHI_01789 5e-38 ptsH G PTS HPr component phosphorylation site
AMCFPIHI_01790 4.4e-200 K helix_turn _helix lactose operon repressor
AMCFPIHI_01791 1.4e-212 holB 2.7.7.7 L DNA polymerase III
AMCFPIHI_01792 1.1e-117 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AMCFPIHI_01793 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMCFPIHI_01794 2.3e-188 3.6.1.27 I PAP2 superfamily
AMCFPIHI_01795 0.0 vpr M PA domain
AMCFPIHI_01796 8e-123 yplQ S Haemolysin-III related
AMCFPIHI_01797 1.2e-232 glf 5.4.99.9 M UDP-galactopyranose mutase
AMCFPIHI_01798 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
AMCFPIHI_01799 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMCFPIHI_01800 8.7e-278 S Calcineurin-like phosphoesterase
AMCFPIHI_01801 2e-285 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
AMCFPIHI_01802 1.7e-116
AMCFPIHI_01803 2.6e-213 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AMCFPIHI_01805 2.1e-97 askB 1.1.1.3, 2.7.2.4 E ACT domain
AMCFPIHI_01806 1.8e-136 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
AMCFPIHI_01807 6.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AMCFPIHI_01808 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
AMCFPIHI_01809 3.7e-215 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
AMCFPIHI_01810 6.9e-57 S TIGRFAM helicase secretion neighborhood TadE-like protein
AMCFPIHI_01811 4.8e-55 U TadE-like protein
AMCFPIHI_01812 3.2e-41 S Protein of unknown function (DUF4244)
AMCFPIHI_01813 9.5e-79 gspF NU Type II secretion system (T2SS), protein F
AMCFPIHI_01814 5.7e-121 U Type ii secretion system
AMCFPIHI_01815 3.4e-191 cpaF U Type II IV secretion system protein
AMCFPIHI_01816 2.2e-151 cpaE D bacterial-type flagellum organization
AMCFPIHI_01818 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AMCFPIHI_01819 6.3e-201 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
AMCFPIHI_01820 5e-91
AMCFPIHI_01821 2.1e-42 cbiM P PDGLE domain
AMCFPIHI_01822 9.1e-59 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
AMCFPIHI_01823 9e-209 S Glycosyltransferase, group 2 family protein
AMCFPIHI_01824 9.8e-261
AMCFPIHI_01826 3.3e-26 thiS 2.8.1.10 H ThiS family
AMCFPIHI_01827 1.9e-164 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
AMCFPIHI_01828 0.0 S Psort location Cytoplasmic, score 8.87
AMCFPIHI_01829 1.9e-19 gtrB GT2 M Glycosyl transferase family 2
AMCFPIHI_01830 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
AMCFPIHI_01831 1e-249 V ABC transporter permease
AMCFPIHI_01832 5.6e-186 V ABC transporter
AMCFPIHI_01833 2.3e-136 T HD domain
AMCFPIHI_01834 2.1e-165 S Glutamine amidotransferase domain
AMCFPIHI_01836 0.0 kup P Transport of potassium into the cell
AMCFPIHI_01837 5.9e-185 tatD L TatD related DNase
AMCFPIHI_01838 1.8e-205 xylR 5.3.1.12 G MFS/sugar transport protein
AMCFPIHI_01839 2.3e-25 G Bacterial extracellular solute-binding protein
AMCFPIHI_01840 5.5e-78 K Transcriptional regulator
AMCFPIHI_01841 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMCFPIHI_01842 1.6e-130
AMCFPIHI_01843 1.9e-58
AMCFPIHI_01844 4.6e-172 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AMCFPIHI_01845 5.9e-126 dedA S SNARE associated Golgi protein
AMCFPIHI_01847 3.5e-134 S HAD hydrolase, family IA, variant 3
AMCFPIHI_01848 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR Asp-box repeat
AMCFPIHI_01849 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR repeat-like domain
AMCFPIHI_01850 5.2e-87 hspR K transcriptional regulator, MerR family
AMCFPIHI_01851 1.4e-173 dnaJ1 O DnaJ molecular chaperone homology domain
AMCFPIHI_01852 1.4e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMCFPIHI_01853 0.0 dnaK O Heat shock 70 kDa protein
AMCFPIHI_01854 0.0 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
AMCFPIHI_01855 1e-190 K Psort location Cytoplasmic, score
AMCFPIHI_01857 1.8e-138 G Phosphoglycerate mutase family
AMCFPIHI_01858 8e-70 S Protein of unknown function (DUF4235)
AMCFPIHI_01859 2.3e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
AMCFPIHI_01860 1.1e-45
AMCFPIHI_01861 5.4e-160 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)