ORF_ID e_value Gene_name EC_number CAZy COGs Description
PAFACDOC_00001 7.8e-296 S ABC transporter, ATP-binding protein
PAFACDOC_00002 2e-106 3.2.2.20 K acetyltransferase
PAFACDOC_00003 2.2e-81 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAFACDOC_00004 6e-39
PAFACDOC_00005 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PAFACDOC_00006 9.6e-191 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAFACDOC_00007 5e-162 degV S Uncharacterised protein, DegV family COG1307
PAFACDOC_00008 4e-229 hom1 1.1.1.3 E Homoserine dehydrogenase
PAFACDOC_00009 2.6e-244 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PAFACDOC_00010 1.3e-165 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PAFACDOC_00011 3.1e-176 XK27_08835 S ABC transporter
PAFACDOC_00012 8.7e-154 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PAFACDOC_00013 6.4e-137 XK27_08845 S ABC transporter, ATP-binding protein
PAFACDOC_00014 5.7e-258 npr 1.11.1.1 C NADH oxidase
PAFACDOC_00015 4.2e-158 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PAFACDOC_00016 3.1e-136 terC P membrane
PAFACDOC_00017 3.1e-85 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PAFACDOC_00018 5.9e-202 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PAFACDOC_00019 7.6e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PAFACDOC_00020 3.8e-59 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PAFACDOC_00021 7.6e-135 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PAFACDOC_00022 2.2e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PAFACDOC_00023 4.1e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PAFACDOC_00024 7.9e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PAFACDOC_00025 4.6e-233 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PAFACDOC_00026 4.3e-118 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PAFACDOC_00027 1.9e-214 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PAFACDOC_00028 3.8e-164 hisK 3.1.3.15 E Histidinol phosphate phosphatase, HisJ
PAFACDOC_00029 4.6e-216 ysaA V RDD family
PAFACDOC_00030 7.6e-166 corA P CorA-like Mg2+ transporter protein
PAFACDOC_00031 2.1e-55 S Domain of unknown function (DU1801)
PAFACDOC_00032 5.9e-91 rmeB K transcriptional regulator, MerR family
PAFACDOC_00033 1.4e-147 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PAFACDOC_00034 8.6e-98 J glyoxalase III activity
PAFACDOC_00035 5.2e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAFACDOC_00036 5.9e-185 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAFACDOC_00037 3.7e-34
PAFACDOC_00038 2.6e-112 S Protein of unknown function (DUF1211)
PAFACDOC_00039 0.0 ydgH S MMPL family
PAFACDOC_00040 1.5e-41 M domain protein
PAFACDOC_00041 3.9e-219 M domain protein
PAFACDOC_00042 1.5e-74 yjcF S Acetyltransferase (GNAT) domain
PAFACDOC_00043 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAFACDOC_00044 0.0 glpQ 3.1.4.46 C phosphodiesterase
PAFACDOC_00045 3.4e-183 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PAFACDOC_00046 4.4e-143 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_00047 3.6e-168 S Polyphosphate kinase 2 (PPK2)
PAFACDOC_00048 1.2e-97 drgA C Nitroreductase family
PAFACDOC_00049 7e-178 iunH2 3.2.2.1 F nucleoside hydrolase
PAFACDOC_00050 2.2e-146 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAFACDOC_00051 8.8e-123 S Sucrose-6F-phosphate phosphohydrolase
PAFACDOC_00052 2.3e-157 ccpB 5.1.1.1 K lacI family
PAFACDOC_00053 1.1e-116 K Helix-turn-helix domain, rpiR family
PAFACDOC_00054 6e-177 S Oxidoreductase family, NAD-binding Rossmann fold
PAFACDOC_00055 1.1e-197 yhhX 1.1.1.371 S Oxidoreductase family, C-terminal alpha/beta domain
PAFACDOC_00056 0.0 yjcE P Sodium proton antiporter
PAFACDOC_00057 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAFACDOC_00058 3.7e-107 pncA Q Isochorismatase family
PAFACDOC_00059 2.7e-132
PAFACDOC_00060 8.7e-125 skfE V ABC transporter
PAFACDOC_00061 9.5e-65 yvoA_1 K Transcriptional regulator, GntR family
PAFACDOC_00062 1.2e-45 S Enterocin A Immunity
PAFACDOC_00063 3.8e-173 D Alpha beta
PAFACDOC_00064 0.0 pepF2 E Oligopeptidase F
PAFACDOC_00065 1.3e-72 K Transcriptional regulator
PAFACDOC_00066 2.3e-164
PAFACDOC_00067 1.3e-57
PAFACDOC_00068 6.5e-47
PAFACDOC_00069 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAFACDOC_00070 9.8e-28
PAFACDOC_00071 8.4e-145 yjfP S Dienelactone hydrolase family
PAFACDOC_00072 2.3e-56 dsbJ 2.7.1.180, 5.3.4.1 CO Thioredoxin
PAFACDOC_00073 1.6e-205 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PAFACDOC_00074 5.2e-47
PAFACDOC_00075 1.7e-45
PAFACDOC_00076 5e-82 yybC S Protein of unknown function (DUF2798)
PAFACDOC_00077 3.7e-73
PAFACDOC_00078 4e-60
PAFACDOC_00079 5.1e-195 lplA 6.3.1.20 H Lipoate-protein ligase
PAFACDOC_00080 0.0 acm2 3.2.1.17 NU Bacterial SH3 domain
PAFACDOC_00081 1.6e-79 uspA T universal stress protein
PAFACDOC_00082 1.3e-154 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAFACDOC_00083 1.7e-48 K Cro/C1-type HTH DNA-binding domain
PAFACDOC_00084 3.3e-21 S Protein of unknown function (DUF2929)
PAFACDOC_00085 2.3e-223 lsgC M Glycosyl transferases group 1
PAFACDOC_00086 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PAFACDOC_00087 2.3e-164 S Putative esterase
PAFACDOC_00088 2.4e-130 gntR2 K Transcriptional regulator
PAFACDOC_00089 4.5e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAFACDOC_00090 1.5e-138
PAFACDOC_00091 3.1e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAFACDOC_00092 5.5e-138 rrp8 K LytTr DNA-binding domain
PAFACDOC_00093 4.2e-92 M1-874 K Domain of unknown function (DUF1836)
PAFACDOC_00094 7.7e-61
PAFACDOC_00095 4.1e-74 hspX O Belongs to the small heat shock protein (HSP20) family
PAFACDOC_00096 4.4e-58
PAFACDOC_00097 1.2e-239 yhdP S Transporter associated domain
PAFACDOC_00098 4.9e-87 nrdI F Belongs to the NrdI family
PAFACDOC_00099 2.9e-269 yjcE P Sodium proton antiporter
PAFACDOC_00100 2.8e-213 yttB EGP Major facilitator Superfamily
PAFACDOC_00101 5e-63 K helix_turn_helix, mercury resistance
PAFACDOC_00102 3e-30 C Zinc-binding dehydrogenase
PAFACDOC_00103 1.9e-127 C Zinc-binding dehydrogenase
PAFACDOC_00104 8.5e-57 S SdpI/YhfL protein family
PAFACDOC_00105 6.3e-295 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAFACDOC_00106 3.6e-260 gabR K Bacterial regulatory proteins, gntR family
PAFACDOC_00107 5e-218 patA 2.6.1.1 E Aminotransferase
PAFACDOC_00108 7.8e-160 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAFACDOC_00109 3e-18
PAFACDOC_00110 1.7e-126 S membrane transporter protein
PAFACDOC_00111 7.3e-161 mleR K LysR family
PAFACDOC_00112 5.6e-115 ylbE GM NAD(P)H-binding
PAFACDOC_00113 8.2e-96 wecD K Acetyltransferase (GNAT) family
PAFACDOC_00114 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PAFACDOC_00115 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PAFACDOC_00116 1.6e-169 ydcZ S Putative inner membrane exporter, YdcZ
PAFACDOC_00117 2.4e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAFACDOC_00118 1.8e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PAFACDOC_00119 3.3e-169 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAFACDOC_00120 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PAFACDOC_00121 7.6e-213 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAFACDOC_00122 6.4e-243 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAFACDOC_00123 1.6e-171 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PAFACDOC_00124 1.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAFACDOC_00125 1e-298 pucR QT Purine catabolism regulatory protein-like family
PAFACDOC_00126 2.7e-236 pbuX F xanthine permease
PAFACDOC_00127 2.4e-221 pbuG S Permease family
PAFACDOC_00128 5.6e-161 GM NmrA-like family
PAFACDOC_00129 6.5e-156 T EAL domain
PAFACDOC_00130 2.6e-94
PAFACDOC_00131 9.2e-253 pgaC GT2 M Glycosyl transferase
PAFACDOC_00132 1e-122 2.1.1.14 E Methionine synthase
PAFACDOC_00133 2.1e-214 purD 6.3.4.13 F Belongs to the GARS family
PAFACDOC_00134 2.3e-287 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PAFACDOC_00135 9.9e-103 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PAFACDOC_00136 1.6e-188 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PAFACDOC_00137 2.1e-279 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PAFACDOC_00138 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAFACDOC_00139 2e-126 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAFACDOC_00140 3.6e-41 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAFACDOC_00141 2.9e-131 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PAFACDOC_00142 8.7e-212 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAFACDOC_00143 1.7e-79 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAFACDOC_00144 4.3e-223 XK27_09615 1.3.5.4 S reductase
PAFACDOC_00145 1.8e-110 XK27_09620 1.3.5.4 S NADPH-dependent FMN reductase
PAFACDOC_00146 3.2e-189 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
PAFACDOC_00147 1.2e-146 ptp3 3.1.3.48 T Tyrosine phosphatase family
PAFACDOC_00148 1.9e-118 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
PAFACDOC_00149 8.3e-148 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_00150 1.5e-180 ansA 3.5.1.1 EJ Asparaginase
PAFACDOC_00151 1.7e-139 cysA V ABC transporter, ATP-binding protein
PAFACDOC_00152 0.0 V FtsX-like permease family
PAFACDOC_00153 7.4e-40
PAFACDOC_00154 7.9e-61 gntR1 K Transcriptional regulator, GntR family
PAFACDOC_00155 6.9e-164 V ABC transporter, ATP-binding protein
PAFACDOC_00156 5.1e-137
PAFACDOC_00157 1.9e-80 uspA T universal stress protein
PAFACDOC_00158 4e-34
PAFACDOC_00159 5.5e-71 gtcA S Teichoic acid glycosylation protein
PAFACDOC_00160 1.1e-88
PAFACDOC_00161 3.2e-50
PAFACDOC_00163 1.7e-234 malY 4.4.1.8 E Aminotransferase, class I
PAFACDOC_00164 7.3e-86 2.7.7.1, 3.6.1.55 F belongs to the nudix hydrolase family
PAFACDOC_00165 5.4e-118
PAFACDOC_00166 1.5e-52
PAFACDOC_00168 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PAFACDOC_00169 1.1e-281 thrC 4.2.3.1 E Threonine synthase
PAFACDOC_00170 4.5e-146 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
PAFACDOC_00171 4.4e-11 mcbG S Pentapeptide repeats (8 copies)
PAFACDOC_00172 2.5e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PAFACDOC_00173 7.5e-103 3.6.1.13 L Belongs to the Nudix hydrolase family
PAFACDOC_00174 7.8e-69 FG Scavenger mRNA decapping enzyme C-term binding
PAFACDOC_00175 1.1e-133 IQ Enoyl-(Acyl carrier protein) reductase
PAFACDOC_00176 1.2e-35 XK27_01315 S Protein of unknown function (DUF2829)
PAFACDOC_00177 1.4e-211 S Bacterial protein of unknown function (DUF871)
PAFACDOC_00178 2.1e-232 S Sterol carrier protein domain
PAFACDOC_00179 3.6e-88 niaR S 3H domain
PAFACDOC_00180 6.6e-265 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAFACDOC_00181 2.8e-117 K Transcriptional regulator
PAFACDOC_00182 1.1e-151 V ABC transporter
PAFACDOC_00183 8.2e-134 V AAA domain, putative AbiEii toxin, Type IV TA system
PAFACDOC_00184 4.8e-246 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
PAFACDOC_00185 1.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAFACDOC_00186 3.3e-296 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAFACDOC_00187 1.8e-54 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PAFACDOC_00188 2.3e-48 pts20B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PAFACDOC_00189 9.9e-129 gntR K UTRA
PAFACDOC_00190 6.8e-141 epsV 2.7.8.12 S glycosyl transferase family 2
PAFACDOC_00191 6.5e-122 pgm7 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PAFACDOC_00192 1.8e-81
PAFACDOC_00193 9.8e-152 S hydrolase
PAFACDOC_00194 2.3e-179 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAFACDOC_00195 1.4e-151 EG EamA-like transporter family
PAFACDOC_00196 1.9e-175 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PAFACDOC_00197 3.5e-100 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PAFACDOC_00198 6.5e-232
PAFACDOC_00199 4.2e-77 fld C Flavodoxin
PAFACDOC_00200 0.0 M Bacterial Ig-like domain (group 3)
PAFACDOC_00201 6.2e-149 M Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PAFACDOC_00202 4.1e-283 M Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
PAFACDOC_00203 2.7e-32
PAFACDOC_00204 3.1e-128 aroD 1.1.1.25, 4.2.1.10 E Type I 3-dehydroquinase
PAFACDOC_00205 6.4e-268 ycaM E amino acid
PAFACDOC_00206 8.7e-78 K Winged helix DNA-binding domain
PAFACDOC_00207 2.8e-165 S Oxidoreductase, aldo keto reductase family protein
PAFACDOC_00208 1.1e-161 akr5f 1.1.1.346 S reductase
PAFACDOC_00209 3.9e-162 K Transcriptional regulator
PAFACDOC_00212 3e-252 dtpT U amino acid peptide transporter
PAFACDOC_00213 1.3e-150 yjjH S Calcineurin-like phosphoesterase
PAFACDOC_00217 1.2e-49 5.3.3.19 S Cupin 2, conserved barrel domain protein
PAFACDOC_00218 2.5e-53 S Cupin domain
PAFACDOC_00219 1.6e-165 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PAFACDOC_00220 4.7e-194 ybiR P Citrate transporter
PAFACDOC_00221 1.6e-151 pnuC H nicotinamide mononucleotide transporter
PAFACDOC_00222 3.8e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAFACDOC_00223 6.1e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAFACDOC_00224 1.6e-123 gntR1 K UbiC transcription regulator-associated domain protein
PAFACDOC_00225 8.7e-136 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PAFACDOC_00226 5.2e-289 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAFACDOC_00227 1.4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PAFACDOC_00228 0.0 pacL 3.6.3.8 P P-type ATPase
PAFACDOC_00229 3.4e-71
PAFACDOC_00230 0.0 yhgF K Tex-like protein N-terminal domain protein
PAFACDOC_00231 3.7e-81 ydcK S Belongs to the SprT family
PAFACDOC_00232 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PAFACDOC_00233 2.9e-154 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PAFACDOC_00235 7.4e-152 G Peptidase_C39 like family
PAFACDOC_00236 1.3e-168 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PAFACDOC_00237 3.4e-133 manY G PTS system
PAFACDOC_00238 4.4e-169 manN G system, mannose fructose sorbose family IID component
PAFACDOC_00239 4.7e-64 S Domain of unknown function (DUF956)
PAFACDOC_00240 0.0 levR K Sigma-54 interaction domain
PAFACDOC_00241 4.3e-71 pts10A 2.7.1.191 G PTS system fructose IIA component
PAFACDOC_00242 3.1e-87 pts10B 2.7.1.191, 2.7.1.202 G PTS system sorbose subfamily IIB component
PAFACDOC_00243 5.4e-178 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAFACDOC_00244 9.7e-65 accB 2.3.1.12 I Biotin-requiring enzyme
PAFACDOC_00245 1.5e-247 accC2 6.3.4.14, 6.4.1.2 I Biotin carboxylase C-terminal domain
PAFACDOC_00246 8.3e-140 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PAFACDOC_00247 4.3e-133 accA 2.1.3.15, 6.4.1.2 I Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
PAFACDOC_00248 5.3e-167 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAFACDOC_00249 5.6e-167 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PAFACDOC_00250 8.3e-177 EG EamA-like transporter family
PAFACDOC_00251 9.5e-129 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAFACDOC_00252 5.2e-113 zmp2 O Zinc-dependent metalloprotease
PAFACDOC_00253 7.3e-258 pepC 3.4.22.40 E Peptidase C1-like family
PAFACDOC_00254 3.2e-124 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PAFACDOC_00255 1.2e-51 HA62_12640 S GCN5-related N-acetyl-transferase
PAFACDOC_00256 3.6e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PAFACDOC_00257 1.3e-257 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAFACDOC_00258 3.7e-205 yacL S domain protein
PAFACDOC_00259 2.6e-288 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAFACDOC_00260 2.3e-270 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAFACDOC_00261 3.5e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PAFACDOC_00262 3.3e-138 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAFACDOC_00263 7.7e-97 yacP S YacP-like NYN domain
PAFACDOC_00264 2.4e-101 sigH K Sigma-70 region 2
PAFACDOC_00265 6.5e-22 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PAFACDOC_00266 6.8e-29 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAFACDOC_00267 3.7e-99 nusG K Participates in transcription elongation, termination and antitermination
PAFACDOC_00268 2.6e-158 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_00269 2.4e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAFACDOC_00270 5.1e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAFACDOC_00271 4.6e-80 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAFACDOC_00272 9.9e-56 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAFACDOC_00273 9.3e-178 F DNA/RNA non-specific endonuclease
PAFACDOC_00274 1.2e-38 L nuclease
PAFACDOC_00275 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAFACDOC_00276 4.6e-108 yvdD 3.2.2.10 S Belongs to the LOG family
PAFACDOC_00277 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAFACDOC_00278 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAFACDOC_00279 6.5e-37 nrdH O Glutaredoxin
PAFACDOC_00280 3.4e-109 rsmC 2.1.1.172 J Methyltransferase
PAFACDOC_00281 5.9e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAFACDOC_00282 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAFACDOC_00283 1.7e-40 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAFACDOC_00284 7.4e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAFACDOC_00285 2.2e-38 yaaL S Protein of unknown function (DUF2508)
PAFACDOC_00286 3.3e-118 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAFACDOC_00287 2.4e-53 yaaQ S Cyclic-di-AMP receptor
PAFACDOC_00288 3.3e-186 holB 2.7.7.7 L DNA polymerase III
PAFACDOC_00289 1e-57 yabA L Involved in initiation control of chromosome replication
PAFACDOC_00290 1.1e-164 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAFACDOC_00291 1.1e-147 fat 3.1.2.21 I Acyl-ACP thioesterase
PAFACDOC_00292 4e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAFACDOC_00293 7.2e-211 phnW 2.5.1.49, 2.6.1.37, 3.11.1.1 E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
PAFACDOC_00294 8.5e-145 phnX 2.6.1.37, 3.1.3.18, 3.11.1.1 E Belongs to the HAD-like hydrolase superfamily. PhnX family
PAFACDOC_00295 2.6e-144 phnE1 3.6.1.63 U ABC transporter permease
PAFACDOC_00296 2.5e-136 phnE 3.6.1.63 U Phosphonate ABC transporter permease
PAFACDOC_00297 2.8e-137 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PAFACDOC_00298 5.1e-190 phnD P Phosphonate ABC transporter
PAFACDOC_00299 1.7e-128 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PAFACDOC_00300 6.7e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PAFACDOC_00301 1e-81 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PAFACDOC_00302 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAFACDOC_00303 3.3e-307 uup S ABC transporter, ATP-binding protein
PAFACDOC_00304 1.4e-119 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAFACDOC_00305 6.1e-109 ydiL S CAAX protease self-immunity
PAFACDOC_00306 1e-31 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAFACDOC_00307 8.5e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAFACDOC_00308 0.0 ydaO E amino acid
PAFACDOC_00309 2.7e-181 tagO 2.7.8.33, 2.7.8.35 M transferase
PAFACDOC_00310 4.3e-145 pstS P Phosphate
PAFACDOC_00311 1.7e-114 yvyE 3.4.13.9 S YigZ family
PAFACDOC_00312 9.6e-258 comFA L Helicase C-terminal domain protein
PAFACDOC_00313 7.5e-126 comFC S Competence protein
PAFACDOC_00314 3.5e-100 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAFACDOC_00315 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAFACDOC_00316 4.1e-203 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAFACDOC_00317 7.9e-216 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PAFACDOC_00318 1.5e-132 K response regulator
PAFACDOC_00319 3.5e-250 phoR 2.7.13.3 T Histidine kinase
PAFACDOC_00320 2.1e-149 pstS P Phosphate
PAFACDOC_00321 2.6e-161 pstC P probably responsible for the translocation of the substrate across the membrane
PAFACDOC_00322 1.5e-155 pstA P Phosphate transport system permease protein PstA
PAFACDOC_00323 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAFACDOC_00324 3.3e-138 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAFACDOC_00325 8.3e-117 phoU P Plays a role in the regulation of phosphate uptake
PAFACDOC_00326 2e-49 pspC KT positive regulation of macromolecule biosynthetic process
PAFACDOC_00327 9.2e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PAFACDOC_00328 1.4e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PAFACDOC_00329 2.3e-164 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAFACDOC_00330 8.5e-182 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PAFACDOC_00331 2.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PAFACDOC_00332 1.9e-124 yliE T Putative diguanylate phosphodiesterase
PAFACDOC_00333 3.9e-270 nox C NADH oxidase
PAFACDOC_00334 1.7e-176 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAFACDOC_00335 2e-109 yviA S Protein of unknown function (DUF421)
PAFACDOC_00336 1.1e-61 S Protein of unknown function (DUF3290)
PAFACDOC_00337 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PAFACDOC_00338 3.3e-132 yliE T Putative diguanylate phosphodiesterase
PAFACDOC_00339 1.4e-259 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PAFACDOC_00340 3.3e-103 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PAFACDOC_00341 9.2e-212 norA EGP Major facilitator Superfamily
PAFACDOC_00342 3.6e-117 yfbR S HD containing hydrolase-like enzyme
PAFACDOC_00343 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAFACDOC_00344 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAFACDOC_00345 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAFACDOC_00346 1.8e-231 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PAFACDOC_00347 7.9e-263 argH 4.3.2.1 E argininosuccinate lyase
PAFACDOC_00348 3.5e-86 S Short repeat of unknown function (DUF308)
PAFACDOC_00349 1.1e-161 rapZ S Displays ATPase and GTPase activities
PAFACDOC_00350 1.9e-189 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PAFACDOC_00351 3.7e-168 whiA K May be required for sporulation
PAFACDOC_00352 9.9e-289 oppA E ABC transporter, substratebinding protein
PAFACDOC_00353 7.4e-175 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAFACDOC_00354 3e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAFACDOC_00356 4.2e-245 rpoN K Sigma-54 factor, core binding domain
PAFACDOC_00357 7.3e-189 cggR K Putative sugar-binding domain
PAFACDOC_00358 2.6e-191 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAFACDOC_00359 8.1e-224 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PAFACDOC_00360 1.2e-137 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAFACDOC_00361 1.6e-249 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAFACDOC_00362 2e-131
PAFACDOC_00363 6.6e-295 clcA P chloride
PAFACDOC_00364 3.5e-30 secG U Preprotein translocase
PAFACDOC_00365 5e-139 est 3.1.1.1 S Serine aminopeptidase, S33
PAFACDOC_00366 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAFACDOC_00367 9.3e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAFACDOC_00368 0.0 3.4.21.72 M Bacterial Ig-like domain (group 3)
PAFACDOC_00369 1.5e-256 glnP P ABC transporter
PAFACDOC_00370 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAFACDOC_00371 6.1e-105 yxjI
PAFACDOC_00372 4.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PAFACDOC_00373 1.6e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAFACDOC_00374 1.4e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PAFACDOC_00375 5e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PAFACDOC_00376 8.1e-88 2.3.1.128, 2.3.1.178 J Acetyltransferase (GNAT) domain
PAFACDOC_00377 5.6e-100 dnaQ 2.7.7.7 L DNA polymerase III
PAFACDOC_00378 5.6e-154 xth 3.1.11.2 L exodeoxyribonuclease III
PAFACDOC_00379 3.9e-162 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
PAFACDOC_00380 6.2e-168 murB 1.3.1.98 M Cell wall formation
PAFACDOC_00381 0.0 yjcE P Sodium proton antiporter
PAFACDOC_00382 1.3e-90 K helix_turn_helix multiple antibiotic resistance protein
PAFACDOC_00383 2.1e-120 S Protein of unknown function (DUF1361)
PAFACDOC_00384 6e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAFACDOC_00385 1.6e-129 ybbR S YbbR-like protein
PAFACDOC_00386 1.6e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAFACDOC_00387 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAFACDOC_00388 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PAFACDOC_00389 3.7e-95 hsdM 2.1.1.72 V type I restriction-modification system
PAFACDOC_00390 1.7e-151 hsdM 2.1.1.72 V type I restriction-modification system
PAFACDOC_00391 1.6e-67 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PAFACDOC_00392 2.7e-171 L Belongs to the 'phage' integrase family
PAFACDOC_00393 1.7e-46 3.1.21.3 V Type I restriction modification DNA specificity domain
PAFACDOC_00394 5.5e-92 XK27_09665 5.4.2.11 G Phosphoglycerate mutase family
PAFACDOC_00395 1e-298 nagH 2.7.13.3, 3.2.1.4, 3.2.1.52, 3.2.1.78, 3.2.1.8 GH20,GH26,GH5,GH9 M MucBP domain
PAFACDOC_00396 7.4e-186 nagH 2.7.13.3, 3.2.1.4, 3.2.1.52, 3.2.1.78, 3.2.1.8 GH20,GH26,GH5,GH9 M MucBP domain
PAFACDOC_00398 6.5e-87 S AAA domain
PAFACDOC_00399 2.3e-139 K sequence-specific DNA binding
PAFACDOC_00400 7.2e-47 K Helix-turn-helix domain
PAFACDOC_00401 5.2e-41 K Helix-turn-helix domain
PAFACDOC_00402 2.8e-171 K Transcriptional regulator
PAFACDOC_00403 1.2e-97 1.3.5.4 C FMN_bind
PAFACDOC_00404 1.3e-210 1.3.5.4 C FMN_bind
PAFACDOC_00406 2.3e-81 rmaD K Transcriptional regulator
PAFACDOC_00407 4.2e-115 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PAFACDOC_00408 5.6e-255 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PAFACDOC_00409 9.9e-199 asnA 6.3.1.1 F aspartate--ammonia ligase
PAFACDOC_00410 6.7e-278 pipD E Dipeptidase
PAFACDOC_00411 1.7e-221 2.7.7.7, 3.6.4.12 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PAFACDOC_00412 8.5e-41
PAFACDOC_00413 4.1e-32 L leucine-zipper of insertion element IS481
PAFACDOC_00414 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PAFACDOC_00415 3.4e-163 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PAFACDOC_00416 1.5e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
PAFACDOC_00417 5.6e-138 S NADPH-dependent FMN reductase
PAFACDOC_00418 3.9e-179
PAFACDOC_00419 1.4e-218 yibE S overlaps another CDS with the same product name
PAFACDOC_00420 3.4e-127 yibF S overlaps another CDS with the same product name
PAFACDOC_00421 2e-91 3.2.2.20 K FR47-like protein
PAFACDOC_00422 3.2e-121 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PAFACDOC_00423 5.6e-49
PAFACDOC_00424 2.6e-191 nlhH_1 I alpha/beta hydrolase fold
PAFACDOC_00425 1e-254 xylP2 G symporter
PAFACDOC_00426 1.5e-280 murE 6.3.2.10, 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAFACDOC_00427 1e-218 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PAFACDOC_00428 0.0 asnB 6.3.5.4 E Asparagine synthase
PAFACDOC_00429 9.4e-50 azlD S Branched-chain amino acid transport protein (AzlD)
PAFACDOC_00430 1.7e-120 azlC E branched-chain amino acid
PAFACDOC_00431 4.4e-35 yyaN K MerR HTH family regulatory protein
PAFACDOC_00432 1e-106
PAFACDOC_00433 1.4e-117 S Domain of unknown function (DUF4811)
PAFACDOC_00434 7e-270 lmrB EGP Major facilitator Superfamily
PAFACDOC_00435 1.7e-84 merR K MerR HTH family regulatory protein
PAFACDOC_00436 2.6e-58
PAFACDOC_00437 2e-120 sirR K iron dependent repressor
PAFACDOC_00438 6e-31 cspC K Cold shock protein
PAFACDOC_00439 1.5e-130 thrE S Putative threonine/serine exporter
PAFACDOC_00440 2.2e-76 S Threonine/Serine exporter, ThrE
PAFACDOC_00441 1.5e-189 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAFACDOC_00442 3.9e-119 lssY 3.6.1.27 I phosphatase
PAFACDOC_00443 2e-154 I alpha/beta hydrolase fold
PAFACDOC_00444 2.8e-99 2.3.1.128 J Acetyltransferase (GNAT) domain
PAFACDOC_00445 3.6e-91 K Transcriptional regulator
PAFACDOC_00446 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PAFACDOC_00447 1.6e-263 lysP E amino acid
PAFACDOC_00448 9.4e-114 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PAFACDOC_00449 2.5e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PAFACDOC_00450 4.1e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAFACDOC_00458 6.9e-78 ctsR K Belongs to the CtsR family
PAFACDOC_00459 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAFACDOC_00460 1.5e-109 K Bacterial regulatory proteins, tetR family
PAFACDOC_00461 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAFACDOC_00462 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAFACDOC_00463 1.6e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PAFACDOC_00464 3.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAFACDOC_00465 5.5e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAFACDOC_00466 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAFACDOC_00467 2.6e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PAFACDOC_00468 1.3e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAFACDOC_00469 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
PAFACDOC_00470 1.8e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAFACDOC_00471 8.1e-146 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAFACDOC_00472 8.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAFACDOC_00473 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAFACDOC_00474 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAFACDOC_00475 9.2e-77 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAFACDOC_00476 1.4e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PAFACDOC_00477 2.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAFACDOC_00478 4.3e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAFACDOC_00479 2.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAFACDOC_00480 3.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAFACDOC_00481 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAFACDOC_00482 3.5e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAFACDOC_00483 3.3e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAFACDOC_00484 6.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAFACDOC_00485 2.2e-24 rpmD J Ribosomal protein L30
PAFACDOC_00486 6.3e-70 rplO J Binds to the 23S rRNA
PAFACDOC_00487 1.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAFACDOC_00488 2.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAFACDOC_00489 3.9e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAFACDOC_00490 1.1e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAFACDOC_00491 3.4e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAFACDOC_00492 5.7e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAFACDOC_00493 2.1e-61 rplQ J Ribosomal protein L17
PAFACDOC_00494 1.4e-181 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAFACDOC_00495 1.7e-94 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
PAFACDOC_00496 7.2e-86 ynhH S NusG domain II
PAFACDOC_00497 0.0 ndh 1.6.99.3 C NADH dehydrogenase
PAFACDOC_00498 3.5e-142 cad S FMN_bind
PAFACDOC_00499 4.4e-208 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAFACDOC_00500 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAFACDOC_00501 8.2e-165 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAFACDOC_00502 6.7e-142 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAFACDOC_00503 3.9e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAFACDOC_00504 1.3e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAFACDOC_00505 1.9e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PAFACDOC_00506 2.3e-164 degV S Uncharacterised protein, DegV family COG1307
PAFACDOC_00507 2.2e-173 ywhK S Membrane
PAFACDOC_00508 5.5e-30 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PAFACDOC_00509 1.9e-155 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PAFACDOC_00510 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PAFACDOC_00511 1.1e-164 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PAFACDOC_00512 1.8e-184 aroF 2.5.1.54 E DAHP synthetase I family
PAFACDOC_00513 1.8e-198 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PAFACDOC_00514 2.2e-221 P Sodium:sulfate symporter transmembrane region
PAFACDOC_00515 4.1e-53 yitW S Iron-sulfur cluster assembly protein
PAFACDOC_00516 4.1e-115 ttdB 4.2.1.2, 4.2.1.32 C Catalyzes the reversible hydration of fumarate to (S)- malate
PAFACDOC_00517 2.2e-176 ttdA 4.2.1.32 C Fumarate hydratase (Fumerase)
PAFACDOC_00518 7.2e-197 K Helix-turn-helix domain
PAFACDOC_00519 1.1e-153 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PAFACDOC_00520 4.5e-132 mntB 3.6.3.35 P ABC transporter
PAFACDOC_00521 8.2e-141 mtsB U ABC 3 transport family
PAFACDOC_00522 7.9e-174 sitA P Belongs to the bacterial solute-binding protein 9 family
PAFACDOC_00523 3.1e-50
PAFACDOC_00524 1.2e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PAFACDOC_00525 1.7e-260 citP P Sodium:sulfate symporter transmembrane region
PAFACDOC_00526 2.9e-179 citR K sugar-binding domain protein
PAFACDOC_00527 3e-207 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
PAFACDOC_00528 1.7e-188 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PAFACDOC_00529 9e-44 citD C Covalent carrier of the coenzyme of citrate lyase
PAFACDOC_00530 9.7e-161 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PAFACDOC_00531 3e-287 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PAFACDOC_00532 9.2e-256 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PAFACDOC_00533 1.5e-261 frdC 1.3.5.4 C FAD binding domain
PAFACDOC_00534 1e-93 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PAFACDOC_00535 4.9e-162 mleR K LysR family transcriptional regulator
PAFACDOC_00536 1.2e-166 mleR K LysR family
PAFACDOC_00537 4.2e-308 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PAFACDOC_00538 1.4e-165 mleP S Sodium Bile acid symporter family
PAFACDOC_00539 5.8e-253 yfnA E Amino Acid
PAFACDOC_00540 3e-99 S ECF transporter, substrate-specific component
PAFACDOC_00541 1.8e-23
PAFACDOC_00542 9.4e-297 S Alpha beta
PAFACDOC_00543 5.4e-275 cydA 1.10.3.14 C ubiquinol oxidase
PAFACDOC_00544 2.6e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PAFACDOC_00545 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PAFACDOC_00546 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PAFACDOC_00547 6.9e-157 ddpX 3.4.13.22 S L,D-transpeptidase catalytic domain
PAFACDOC_00548 2.8e-182 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAFACDOC_00549 8.5e-165 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PAFACDOC_00550 7.5e-49 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_00551 1.2e-14 K Bacterial regulatory proteins, tetR family
PAFACDOC_00552 4.7e-214 S membrane
PAFACDOC_00553 9.2e-82 K Bacterial regulatory proteins, tetR family
PAFACDOC_00554 0.0 CP_1020 S Zinc finger, swim domain protein
PAFACDOC_00555 2e-112 GM epimerase
PAFACDOC_00556 4.1e-68 S Protein of unknown function (DUF1722)
PAFACDOC_00557 9.1e-71 yneH 1.20.4.1 P ArsC family
PAFACDOC_00558 1.2e-106 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
PAFACDOC_00559 8e-137 K DeoR C terminal sensor domain
PAFACDOC_00560 0.0 naoX P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PAFACDOC_00561 9.2e-209 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PAFACDOC_00562 4.3e-77 K Transcriptional regulator
PAFACDOC_00563 2.2e-241 EGP Major facilitator Superfamily
PAFACDOC_00564 2.6e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAFACDOC_00565 0.0 3.6.3.6 P Cation transporter/ATPase, N-terminus
PAFACDOC_00566 2.2e-179 C Zinc-binding dehydrogenase
PAFACDOC_00567 1.5e-216 I transferase activity, transferring acyl groups other than amino-acyl groups
PAFACDOC_00568 1.7e-207
PAFACDOC_00569 8.1e-91 yetL K helix_turn_helix multiple antibiotic resistance protein
PAFACDOC_00570 7.8e-61 P Rhodanese Homology Domain
PAFACDOC_00571 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PAFACDOC_00572 3.1e-84 K helix_turn_helix multiple antibiotic resistance protein
PAFACDOC_00573 3.2e-167 drrA V ABC transporter
PAFACDOC_00574 2e-119 drrB U ABC-2 type transporter
PAFACDOC_00575 6.9e-223 M O-Antigen ligase
PAFACDOC_00576 1e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
PAFACDOC_00577 7.2e-197 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAFACDOC_00578 1.5e-233 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PAFACDOC_00579 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAFACDOC_00581 5.6e-29 S Protein of unknown function (DUF2929)
PAFACDOC_00582 0.0 dnaE 2.7.7.7 L DNA polymerase
PAFACDOC_00583 1.5e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAFACDOC_00584 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PAFACDOC_00585 1.5e-74 yeaL S Protein of unknown function (DUF441)
PAFACDOC_00586 1.1e-169 cvfB S S1 domain
PAFACDOC_00587 1.1e-164 xerD D recombinase XerD
PAFACDOC_00588 4.8e-69 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAFACDOC_00589 5.7e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PAFACDOC_00590 7.9e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PAFACDOC_00591 1.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAFACDOC_00592 1.1e-96 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAFACDOC_00593 3.6e-196 ypbB 5.1.3.1 S Helix-turn-helix domain
PAFACDOC_00594 6.2e-271 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
PAFACDOC_00595 2e-19 M Lysin motif
PAFACDOC_00596 3.8e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PAFACDOC_00597 1.8e-213 rpsA 1.17.7.4 J Ribosomal protein S1
PAFACDOC_00598 1e-248 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PAFACDOC_00599 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAFACDOC_00600 2.1e-206 S Tetratricopeptide repeat protein
PAFACDOC_00601 3.3e-149 3.1.3.102, 3.1.3.104 S hydrolase
PAFACDOC_00602 5.4e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PAFACDOC_00603 2.1e-227 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PAFACDOC_00604 9.6e-85
PAFACDOC_00605 0.0 yfmR S ABC transporter, ATP-binding protein
PAFACDOC_00606 1.1e-188 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAFACDOC_00607 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAFACDOC_00608 5.1e-148 DegV S EDD domain protein, DegV family
PAFACDOC_00609 2.1e-150 ypmR E GDSL-like Lipase/Acylhydrolase
PAFACDOC_00610 3.1e-113 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PAFACDOC_00611 3.4e-35 yozE S Belongs to the UPF0346 family
PAFACDOC_00612 1.2e-261 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PAFACDOC_00613 7.3e-251 emrY EGP Major facilitator Superfamily
PAFACDOC_00614 1.5e-197 XK27_00915 C Luciferase-like monooxygenase
PAFACDOC_00615 4.2e-124 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PAFACDOC_00616 2.3e-173 L restriction endonuclease
PAFACDOC_00617 3.1e-170 cpsY K Transcriptional regulator, LysR family
PAFACDOC_00618 6.8e-228 XK27_05470 E Methionine synthase
PAFACDOC_00620 4.8e-162 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PAFACDOC_00621 8.2e-137 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAFACDOC_00622 9.5e-158 dprA LU DNA protecting protein DprA
PAFACDOC_00623 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAFACDOC_00624 6.6e-251 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PAFACDOC_00625 1.5e-177 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PAFACDOC_00626 6.7e-93 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PAFACDOC_00627 8.6e-257 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PAFACDOC_00628 3.8e-170 lacX 5.1.3.3 G Aldose 1-epimerase
PAFACDOC_00629 5.2e-105 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAFACDOC_00630 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAFACDOC_00631 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAFACDOC_00632 5.9e-177 K Transcriptional regulator
PAFACDOC_00633 2.9e-168 ppaC 3.6.1.1 C inorganic pyrophosphatase
PAFACDOC_00634 4e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PAFACDOC_00635 1e-95 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAFACDOC_00636 4.2e-32 S YozE SAM-like fold
PAFACDOC_00637 1.2e-157 xerD L Phage integrase, N-terminal SAM-like domain
PAFACDOC_00638 3e-276 GT89 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAFACDOC_00639 6.3e-246 M Glycosyl transferase family group 2
PAFACDOC_00640 1.8e-66
PAFACDOC_00641 9.3e-253 gshR1 1.8.1.7 C Glutathione reductase
PAFACDOC_00642 7.8e-76 mgrA K helix_turn_helix multiple antibiotic resistance protein
PAFACDOC_00643 5.3e-95 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PAFACDOC_00644 0.0 tarL 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAFACDOC_00645 9.9e-216 tarK 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAFACDOC_00646 9.7e-194 tarJ 1.1.1.137, 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
PAFACDOC_00647 3.3e-118 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
PAFACDOC_00648 5.1e-227
PAFACDOC_00649 4.6e-275 lldP C L-lactate permease
PAFACDOC_00650 4.1e-59
PAFACDOC_00651 3.5e-123
PAFACDOC_00652 3.2e-245 cycA E Amino acid permease
PAFACDOC_00653 3.7e-130 XK27_00890 S Domain of unknown function (DUF368)
PAFACDOC_00654 4.6e-129 yejC S Protein of unknown function (DUF1003)
PAFACDOC_00655 6.2e-51 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
PAFACDOC_00656 4.6e-12
PAFACDOC_00657 1.6e-211 pmrB EGP Major facilitator Superfamily
PAFACDOC_00658 3.3e-149 2.7.7.12 C Domain of unknown function (DUF4931)
PAFACDOC_00659 1.6e-09
PAFACDOC_00660 2.9e-131 S Protein of unknown function (DUF975)
PAFACDOC_00661 8.3e-78 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
PAFACDOC_00662 2.1e-160 degV S EDD domain protein, DegV family
PAFACDOC_00663 1.9e-66 K Transcriptional regulator
PAFACDOC_00664 0.0 FbpA K Fibronectin-binding protein
PAFACDOC_00665 9.3e-133 S ABC-2 family transporter protein
PAFACDOC_00666 5.4e-164 V ABC transporter, ATP-binding protein
PAFACDOC_00667 3e-92 3.6.1.55 F NUDIX domain
PAFACDOC_00668 2.9e-136 S Uncharacterized protein conserved in bacteria (DUF2087)
PAFACDOC_00669 1.2e-69 S LuxR family transcriptional regulator
PAFACDOC_00670 1.7e-130 cat 2.3.1.28 V Chloramphenicol acetyltransferase
PAFACDOC_00673 3.1e-71 frataxin S Domain of unknown function (DU1801)
PAFACDOC_00674 5.5e-112 pgm5 G Phosphoglycerate mutase family
PAFACDOC_00675 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PAFACDOC_00676 8.1e-207 carA 6.3.5.5 F Belongs to the CarA family
PAFACDOC_00677 3.3e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAFACDOC_00678 2e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAFACDOC_00679 4.4e-74 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAFACDOC_00680 1.1e-292 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PAFACDOC_00681 2.2e-61 esbA S Family of unknown function (DUF5322)
PAFACDOC_00682 2.2e-66 rnhA 3.1.26.4 L Ribonuclease HI
PAFACDOC_00683 9.5e-211 yurR 1.4.5.1 E FAD dependent oxidoreductase
PAFACDOC_00684 5.9e-146 S hydrolase activity, acting on ester bonds
PAFACDOC_00685 2.3e-193
PAFACDOC_00686 3.3e-121 3.6.3.35 P ATPases associated with a variety of cellular activities
PAFACDOC_00687 1.3e-123
PAFACDOC_00688 2.3e-181 mccF 3.4.17.13 V LD-carboxypeptidase
PAFACDOC_00689 2.6e-239 M hydrolase, family 25
PAFACDOC_00690 1.2e-91 S Protein of unknown function (DUF669)
PAFACDOC_00691 3.9e-130 S Putative HNHc nuclease
PAFACDOC_00692 1.3e-39 S calcium ion binding
PAFACDOC_00693 1.4e-131 pi346 L IstB-like ATP binding protein
PAFACDOC_00695 2e-59
PAFACDOC_00696 3.7e-66 rusA 3.1.22.4 L Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PAFACDOC_00699 7e-96 2.1.1.37 L C-5 cytosine-specific DNA methylase
PAFACDOC_00701 1.2e-09 S YopX protein
PAFACDOC_00702 1.4e-55
PAFACDOC_00703 1.4e-15
PAFACDOC_00704 8.2e-65 S Transcriptional regulator, RinA family
PAFACDOC_00706 6.1e-88 L HNH nucleases
PAFACDOC_00708 3.6e-79 L Phage terminase, small subunit
PAFACDOC_00709 0.0 S Phage Terminase
PAFACDOC_00710 2.1e-25 S Protein of unknown function (DUF1056)
PAFACDOC_00711 5.2e-223 S Phage portal protein
PAFACDOC_00712 6e-124 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PAFACDOC_00713 7.5e-201 S Phage capsid family
PAFACDOC_00714 6.2e-49 S Phage gp6-like head-tail connector protein
PAFACDOC_00715 1.7e-57 S Phage head-tail joining protein
PAFACDOC_00716 5.2e-66 S Bacteriophage HK97-gp10, putative tail-component
PAFACDOC_00717 3.5e-56 S Protein of unknown function (DUF806)
PAFACDOC_00718 3e-103 S Phage tail tube protein
PAFACDOC_00719 1.8e-57 S Phage tail assembly chaperone proteins, TAC
PAFACDOC_00720 6.6e-24
PAFACDOC_00721 0.0 D NLP P60 protein
PAFACDOC_00722 0.0 S Phage tail protein
PAFACDOC_00723 0.0 S Phage minor structural protein
PAFACDOC_00724 2.3e-88
PAFACDOC_00727 2.9e-71
PAFACDOC_00728 4.7e-20
PAFACDOC_00729 2.5e-206 lys M Glycosyl hydrolases family 25
PAFACDOC_00730 1.3e-36 S Haemolysin XhlA
PAFACDOC_00731 1.3e-23 hol S Bacteriophage holin
PAFACDOC_00733 2.2e-229 rodA D Cell cycle protein
PAFACDOC_00734 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
PAFACDOC_00735 7.9e-143 P ATPases associated with a variety of cellular activities
PAFACDOC_00736 2.4e-220 lytR5 K Cell envelope-related transcriptional attenuator domain
PAFACDOC_00737 9.2e-101 L Helix-turn-helix domain
PAFACDOC_00738 1.5e-177 csbB 2.4.1.83 GT2 M Glycosyltransferase like family 2
PAFACDOC_00739 3e-66
PAFACDOC_00740 4.6e-75
PAFACDOC_00741 1.8e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PAFACDOC_00742 3.7e-87
PAFACDOC_00743 5.6e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAFACDOC_00744 2.9e-36 ynzC S UPF0291 protein
PAFACDOC_00745 4.3e-33 yneF S Uncharacterised protein family (UPF0154)
PAFACDOC_00746 6.4e-119 plsC 2.3.1.51 I Acyltransferase
PAFACDOC_00747 2.1e-132 yabB 2.1.1.223 L Methyltransferase small domain
PAFACDOC_00748 7e-39 yazA L GIY-YIG catalytic domain protein
PAFACDOC_00749 2.3e-187 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAFACDOC_00750 4.7e-134 S Haloacid dehalogenase-like hydrolase
PAFACDOC_00751 6.5e-145 rpsB J Belongs to the universal ribosomal protein uS2 family
PAFACDOC_00752 1e-151 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAFACDOC_00753 2.2e-128 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PAFACDOC_00754 2.5e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAFACDOC_00755 1.8e-147 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAFACDOC_00756 8.4e-137 cdsA 2.7.7.41 I Belongs to the CDS family
PAFACDOC_00757 9.5e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PAFACDOC_00758 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PAFACDOC_00759 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAFACDOC_00760 4.2e-83 rimP J Required for maturation of 30S ribosomal subunits
PAFACDOC_00761 3.3e-217 nusA K Participates in both transcription termination and antitermination
PAFACDOC_00762 9.5e-49 ylxR K Protein of unknown function (DUF448)
PAFACDOC_00763 3.1e-47 ylxQ J ribosomal protein
PAFACDOC_00764 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAFACDOC_00765 4.6e-50 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAFACDOC_00766 2e-264 ydiN 5.4.99.5 G Major Facilitator
PAFACDOC_00767 1e-215 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PAFACDOC_00768 8.5e-93
PAFACDOC_00769 2.5e-223 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PAFACDOC_00770 5.5e-195 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PAFACDOC_00771 2e-86 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PAFACDOC_00772 1.2e-171 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAFACDOC_00773 1.7e-187 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PAFACDOC_00774 7.3e-132 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PAFACDOC_00775 2.4e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAFACDOC_00776 1.5e-80 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAFACDOC_00777 0.0 dnaK O Heat shock 70 kDa protein
PAFACDOC_00778 1.2e-184 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAFACDOC_00779 4.4e-198 pbpX2 V Beta-lactamase
PAFACDOC_00780 8.8e-19 dltX S D-Ala-teichoic acid biosynthesis protein
PAFACDOC_00781 7e-297 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAFACDOC_00782 2.5e-233 dltB M MBOAT, membrane-bound O-acyltransferase family
PAFACDOC_00783 2.4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAFACDOC_00784 6.1e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PAFACDOC_00785 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAFACDOC_00786 4e-127 3.6.4.12 L Belongs to the 'phage' integrase family
PAFACDOC_00789 1.4e-49
PAFACDOC_00790 1.4e-49
PAFACDOC_00791 4e-113 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PAFACDOC_00792 4.5e-177 prmA J Ribosomal protein L11 methyltransferase
PAFACDOC_00793 2.9e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAFACDOC_00794 9.6e-58
PAFACDOC_00795 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAFACDOC_00796 8.5e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAFACDOC_00797 6.5e-116 3.1.3.18 J HAD-hyrolase-like
PAFACDOC_00798 1.6e-160 yniA G Fructosamine kinase
PAFACDOC_00799 4.3e-155 lytH 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PAFACDOC_00800 2.2e-243 hisS 6.1.1.21 J histidyl-tRNA synthetase
PAFACDOC_00801 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PAFACDOC_00802 3.2e-100 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAFACDOC_00803 1.7e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAFACDOC_00804 6.6e-223 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAFACDOC_00805 1.9e-169 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PAFACDOC_00806 7.7e-109 C Enoyl-(Acyl carrier protein) reductase
PAFACDOC_00807 2.1e-151 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PAFACDOC_00808 9.7e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PAFACDOC_00809 2.6e-71 yqeY S YqeY-like protein
PAFACDOC_00810 3.4e-180 phoH T phosphate starvation-inducible protein PhoH
PAFACDOC_00811 1.9e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAFACDOC_00812 4.5e-73 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PAFACDOC_00813 1.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAFACDOC_00814 3.1e-147 recO L Involved in DNA repair and RecF pathway recombination
PAFACDOC_00815 6.8e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PAFACDOC_00816 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PAFACDOC_00817 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAFACDOC_00818 4.6e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAFACDOC_00819 9.5e-65 K helix_turn_helix gluconate operon transcriptional repressor
PAFACDOC_00820 4.8e-165 ytrB V ABC transporter, ATP-binding protein
PAFACDOC_00821 5.9e-202
PAFACDOC_00822 1.5e-197
PAFACDOC_00823 5.2e-128 S ABC-2 family transporter protein
PAFACDOC_00824 5.6e-161 V ABC transporter, ATP-binding protein
PAFACDOC_00825 2.6e-12 yjdF S Protein of unknown function (DUF2992)
PAFACDOC_00826 3.8e-114 S Psort location CytoplasmicMembrane, score
PAFACDOC_00827 2.4e-72 K MarR family
PAFACDOC_00828 6e-82 K Acetyltransferase (GNAT) domain
PAFACDOC_00830 5.2e-159 yvfR V ABC transporter
PAFACDOC_00831 3.1e-136 yvfS V ABC-2 type transporter
PAFACDOC_00832 2.8e-207 desK 2.7.13.3 T Histidine kinase
PAFACDOC_00833 4e-102 desR K helix_turn_helix, Lux Regulon
PAFACDOC_00834 2.1e-271 nox C Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PAFACDOC_00835 6.3e-14 S Alpha beta hydrolase
PAFACDOC_00836 1.9e-172 C nadph quinone reductase
PAFACDOC_00837 1.9e-161 K Transcriptional regulator
PAFACDOC_00838 4.9e-78 S Uncharacterized protein conserved in bacteria (DUF2255)
PAFACDOC_00839 9.9e-112 GM NmrA-like family
PAFACDOC_00840 8.5e-159 S Alpha beta hydrolase
PAFACDOC_00841 1.3e-128 K Helix-turn-helix domain, rpiR family
PAFACDOC_00842 1.5e-80 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PAFACDOC_00843 3.4e-112 ppaX_1 3.1.3.18, 3.6.1.1 S haloacid dehalogenase-like hydrolase
PAFACDOC_00844 6.8e-53
PAFACDOC_00845 1.9e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAFACDOC_00846 3.4e-140 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PAFACDOC_00847 1.4e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAFACDOC_00848 2.6e-39 ylqC S Belongs to the UPF0109 family
PAFACDOC_00849 2.9e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PAFACDOC_00850 1.1e-219 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAFACDOC_00851 2.6e-58 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PAFACDOC_00852 1.9e-169 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAFACDOC_00853 0.0 smc D Required for chromosome condensation and partitioning
PAFACDOC_00854 5.7e-129 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAFACDOC_00855 1.7e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAFACDOC_00856 2.3e-190 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PAFACDOC_00857 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAFACDOC_00858 0.0 yloV S DAK2 domain fusion protein YloV
PAFACDOC_00859 1.8e-57 asp S Asp23 family, cell envelope-related function
PAFACDOC_00860 4.9e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PAFACDOC_00861 3.4e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
PAFACDOC_00862 2.8e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PAFACDOC_00863 3.2e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAFACDOC_00864 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PAFACDOC_00865 1.7e-134 stp 3.1.3.16 T phosphatase
PAFACDOC_00866 3e-251 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PAFACDOC_00867 1.8e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAFACDOC_00868 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAFACDOC_00869 8.8e-218 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAFACDOC_00870 2.4e-30 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAFACDOC_00871 3.3e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PAFACDOC_00872 4.5e-55
PAFACDOC_00873 4.9e-106 opuCD P Binding-protein-dependent transport system inner membrane component
PAFACDOC_00874 6e-174 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAFACDOC_00875 1.2e-104 opuCB E ABC transporter permease
PAFACDOC_00876 5.7e-222 opuCA 3.6.3.32 E ABC transporter, ATP-binding protein
PAFACDOC_00877 4.4e-308 recN L May be involved in recombinational repair of damaged DNA
PAFACDOC_00878 2.2e-76 argR K Regulates arginine biosynthesis genes
PAFACDOC_00879 4e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PAFACDOC_00880 5.5e-153 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAFACDOC_00881 4.3e-33 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAFACDOC_00882 7.9e-244 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAFACDOC_00883 2.2e-151 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAFACDOC_00884 5.2e-69 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAFACDOC_00885 3.5e-74 yqhY S Asp23 family, cell envelope-related function
PAFACDOC_00886 2.2e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAFACDOC_00887 3.8e-193 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PAFACDOC_00888 5.4e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PAFACDOC_00889 3.2e-53 ysxB J Cysteine protease Prp
PAFACDOC_00890 7.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PAFACDOC_00891 1.8e-89 K Transcriptional regulator
PAFACDOC_00892 5.4e-19
PAFACDOC_00895 1.7e-30
PAFACDOC_00896 5.3e-56
PAFACDOC_00897 2.4e-98 dut S Protein conserved in bacteria
PAFACDOC_00898 4e-181
PAFACDOC_00899 2e-161
PAFACDOC_00900 3.1e-264 glnA 6.3.1.2 E glutamine synthetase
PAFACDOC_00901 4.6e-64 glnR K Transcriptional regulator
PAFACDOC_00902 1.6e-174 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAFACDOC_00903 5.8e-140 glpQ 3.1.4.46 C phosphodiesterase
PAFACDOC_00904 6.9e-23 WQ51_02665 S Protein of unknown function (DUF3042)
PAFACDOC_00905 4.4e-68 yqhL P Rhodanese-like protein
PAFACDOC_00906 6.4e-111 pepE 3.4.13.21 E Belongs to the peptidase S51 family
PAFACDOC_00907 5.7e-180 glk 2.7.1.2 G Glucokinase
PAFACDOC_00908 1.4e-33 yqgQ S Bacterial protein of unknown function (DUF910)
PAFACDOC_00909 1.3e-114 gluP 3.4.21.105 S Peptidase, S54 family
PAFACDOC_00910 6.3e-102 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PAFACDOC_00911 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PAFACDOC_00912 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PAFACDOC_00913 0.0 S membrane
PAFACDOC_00914 1.5e-54 yneR S Belongs to the HesB IscA family
PAFACDOC_00915 4e-75 XK27_02470 K LytTr DNA-binding domain
PAFACDOC_00916 2.3e-96 liaI S membrane
PAFACDOC_00917 6.8e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAFACDOC_00918 2.6e-112 udk 2.7.1.48 F Cytidine monophosphokinase
PAFACDOC_00919 6.6e-186 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAFACDOC_00920 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAFACDOC_00921 4.9e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAFACDOC_00922 1.1e-62 yodB K Transcriptional regulator, HxlR family
PAFACDOC_00923 1.3e-93 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAFACDOC_00924 7.9e-140 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAFACDOC_00925 6.4e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PAFACDOC_00926 5.9e-150 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAFACDOC_00927 9.3e-93 S SdpI/YhfL protein family
PAFACDOC_00928 1.7e-226 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PAFACDOC_00929 0.0 sbcC L Putative exonuclease SbcCD, C subunit
PAFACDOC_00930 5.8e-172 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PAFACDOC_00931 8e-307 arlS 2.7.13.3 T Histidine kinase
PAFACDOC_00932 4.3e-121 K response regulator
PAFACDOC_00933 1.2e-244 rarA L recombination factor protein RarA
PAFACDOC_00934 1e-273 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAFACDOC_00935 2e-169 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAFACDOC_00936 7e-88 S Peptidase propeptide and YPEB domain
PAFACDOC_00937 1.6e-97 yceD S Uncharacterized ACR, COG1399
PAFACDOC_00938 3.4e-219 ylbM S Belongs to the UPF0348 family
PAFACDOC_00939 4.4e-140 yqeM Q Methyltransferase
PAFACDOC_00940 2.1e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAFACDOC_00941 3.2e-115 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PAFACDOC_00942 1.4e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAFACDOC_00943 1.1e-50 yhbY J RNA-binding protein
PAFACDOC_00944 4.5e-216 yqeH S Ribosome biogenesis GTPase YqeH
PAFACDOC_00945 1.4e-98 yqeG S HAD phosphatase, family IIIA
PAFACDOC_00946 1.3e-79
PAFACDOC_00947 1e-248 pgaC GT2 M Glycosyl transferase
PAFACDOC_00948 2.2e-134 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
PAFACDOC_00949 1e-62 hxlR K Transcriptional regulator, HxlR family
PAFACDOC_00950 8e-196 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PAFACDOC_00951 5e-240 yrvN L AAA C-terminal domain
PAFACDOC_00952 1.1e-55
PAFACDOC_00953 7.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAFACDOC_00954 1.9e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PAFACDOC_00955 1.8e-84 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAFACDOC_00956 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAFACDOC_00957 1.2e-171 dnaI L Primosomal protein DnaI
PAFACDOC_00958 1.1e-248 dnaB L replication initiation and membrane attachment
PAFACDOC_00959 4.6e-91 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAFACDOC_00960 1e-102 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAFACDOC_00961 1.5e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PAFACDOC_00962 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAFACDOC_00963 4.5e-121 ybhL S Belongs to the BI1 family
PAFACDOC_00964 3.1e-111 hipB K Helix-turn-helix
PAFACDOC_00965 5.5e-45 yitW S Iron-sulfur cluster assembly protein
PAFACDOC_00966 1.4e-272 sufB O assembly protein SufB
PAFACDOC_00967 7.1e-83 nifU C SUF system FeS assembly protein, NifU family
PAFACDOC_00968 8e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PAFACDOC_00969 2.6e-244 sufD O FeS assembly protein SufD
PAFACDOC_00970 4.2e-144 sufC O FeS assembly ATPase SufC
PAFACDOC_00971 1.3e-34 feoA P FeoA domain
PAFACDOC_00972 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PAFACDOC_00973 7.9e-21 S Virus attachment protein p12 family
PAFACDOC_00974 1.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PAFACDOC_00975 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PAFACDOC_00976 1.6e-75 yugI 5.3.1.9 J general stress protein
PAFACDOC_00977 5.5e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAFACDOC_00978 1.9e-118 dedA S SNARE-like domain protein
PAFACDOC_00979 1.8e-116 S Protein of unknown function (DUF1461)
PAFACDOC_00980 1.5e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PAFACDOC_00981 1.5e-80 yutD S Protein of unknown function (DUF1027)
PAFACDOC_00982 1.3e-270 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PAFACDOC_00983 4.4e-117 S Calcineurin-like phosphoesterase
PAFACDOC_00984 5.3e-251 cycA E Amino acid permease
PAFACDOC_00985 7e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAFACDOC_00986 4e-185 ytxK 2.1.1.72 L N-6 DNA Methylase
PAFACDOC_00988 4.5e-88 S Prokaryotic N-terminal methylation motif
PAFACDOC_00989 8.6e-20
PAFACDOC_00990 3.2e-83 gspG NU general secretion pathway protein
PAFACDOC_00991 5.5e-43 comGC U competence protein ComGC
PAFACDOC_00992 1.9e-189 comGB NU type II secretion system
PAFACDOC_00993 2.1e-174 comGA NU Type II IV secretion system protein
PAFACDOC_00994 4.8e-160 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAFACDOC_00995 8.3e-131 yebC K Transcriptional regulatory protein
PAFACDOC_00996 1.6e-49 S DsrE/DsrF-like family
PAFACDOC_00997 6.8e-164 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
PAFACDOC_00998 1.9e-181 ccpA K catabolite control protein A
PAFACDOC_00999 2.4e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PAFACDOC_01000 1.9e-62 K helix_turn_helix, mercury resistance
PAFACDOC_01001 2.8e-56
PAFACDOC_01002 1.9e-23 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PAFACDOC_01003 2.6e-158 ykuT M mechanosensitive ion channel
PAFACDOC_01004 1.7e-226 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PAFACDOC_01005 2.6e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PAFACDOC_01006 6.5e-87 ykuL S (CBS) domain
PAFACDOC_01007 9.5e-97 S Phosphoesterase
PAFACDOC_01008 1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAFACDOC_01009 9e-150 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PAFACDOC_01010 7.6e-126 yslB S Protein of unknown function (DUF2507)
PAFACDOC_01011 3.3e-52 trxA O Belongs to the thioredoxin family
PAFACDOC_01012 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAFACDOC_01013 2.7e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PAFACDOC_01014 1.6e-48 yrzB S Belongs to the UPF0473 family
PAFACDOC_01015 7.3e-74 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAFACDOC_01016 2.4e-43 yrzL S Belongs to the UPF0297 family
PAFACDOC_01017 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAFACDOC_01018 9.3e-245 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PAFACDOC_01019 7e-178 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PAFACDOC_01020 5.3e-217 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAFACDOC_01021 2.8e-29 yajC U Preprotein translocase
PAFACDOC_01022 3.3e-227 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAFACDOC_01023 6.3e-201 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAFACDOC_01024 2.1e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAFACDOC_01025 4.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAFACDOC_01026 9.6e-89
PAFACDOC_01027 0.0 S Bacterial membrane protein YfhO
PAFACDOC_01028 3.1e-71
PAFACDOC_01029 0.0 L Transposase
PAFACDOC_01030 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAFACDOC_01031 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAFACDOC_01032 2.7e-154 ymdB S YmdB-like protein
PAFACDOC_01033 2.1e-216 rny S Endoribonuclease that initiates mRNA decay
PAFACDOC_01034 5e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAFACDOC_01035 2.5e-231 cinA 3.5.1.42 S Belongs to the CinA family
PAFACDOC_01036 3.7e-97 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAFACDOC_01037 5.7e-110 ymfM S Helix-turn-helix domain
PAFACDOC_01038 2.9e-251 ymfH S Peptidase M16
PAFACDOC_01039 1.9e-231 ymfF S Peptidase M16 inactive domain protein
PAFACDOC_01040 3.8e-254 lysC 2.7.2.4 E Belongs to the aspartokinase family
PAFACDOC_01041 1.5e-155 aatB ET ABC transporter substrate-binding protein
PAFACDOC_01042 2.5e-115 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAFACDOC_01043 4.6e-109 glnP P ABC transporter permease
PAFACDOC_01044 1.2e-146 minD D Belongs to the ParA family
PAFACDOC_01045 1.1e-116 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PAFACDOC_01046 1.2e-88 mreD M rod shape-determining protein MreD
PAFACDOC_01047 2.6e-144 mreC M Involved in formation and maintenance of cell shape
PAFACDOC_01048 2.8e-161 mreB D cell shape determining protein MreB
PAFACDOC_01049 1.3e-116 radC L DNA repair protein
PAFACDOC_01050 1.8e-248 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PAFACDOC_01051 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAFACDOC_01052 3e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAFACDOC_01053 1.2e-233 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PAFACDOC_01054 1.6e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PAFACDOC_01055 8.3e-218 iscS2 2.8.1.7 E Aminotransferase class V
PAFACDOC_01056 0.0 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PAFACDOC_01057 5e-81 ytsP 1.8.4.14 T GAF domain-containing protein
PAFACDOC_01058 3.1e-107 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAFACDOC_01059 5.2e-113 yktB S Belongs to the UPF0637 family
PAFACDOC_01060 7.3e-80 yueI S Protein of unknown function (DUF1694)
PAFACDOC_01061 2.2e-108 S Protein of unknown function (DUF1648)
PAFACDOC_01062 1.9e-43 czrA K Helix-turn-helix domain
PAFACDOC_01063 0.0 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PAFACDOC_01064 8e-238 rarA L recombination factor protein RarA
PAFACDOC_01065 1.5e-38
PAFACDOC_01066 6.2e-82 usp6 T universal stress protein
PAFACDOC_01067 6.3e-202 bla2 3.5.2.6 V Beta-lactamase enzyme family
PAFACDOC_01068 3.3e-161 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PAFACDOC_01069 7.1e-297 glpQ3 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PAFACDOC_01070 5.4e-214 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PAFACDOC_01071 3.6e-188 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PAFACDOC_01072 1.6e-177 S Protein of unknown function (DUF2785)
PAFACDOC_01073 2.8e-168 hicD1 1.1.1.27 C Belongs to the LDH MDH superfamily
PAFACDOC_01074 6.5e-148 metQ M Belongs to the nlpA lipoprotein family
PAFACDOC_01075 1.4e-111 metI U ABC transporter permease
PAFACDOC_01076 4e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAFACDOC_01077 3.6e-48 gcsH2 E glycine cleavage
PAFACDOC_01078 9.3e-220 rodA D Belongs to the SEDS family
PAFACDOC_01079 1.2e-32 S Protein of unknown function (DUF2969)
PAFACDOC_01080 2.3e-43 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PAFACDOC_01081 2.7e-180 mbl D Cell shape determining protein MreB Mrl
PAFACDOC_01082 2.1e-102 J Acetyltransferase (GNAT) domain
PAFACDOC_01083 3.7e-246 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAFACDOC_01084 1.1e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PAFACDOC_01085 2.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAFACDOC_01086 2.3e-165 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAFACDOC_01087 2.7e-280 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAFACDOC_01088 1.8e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAFACDOC_01089 6e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAFACDOC_01090 2.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAFACDOC_01091 6.5e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PAFACDOC_01092 3e-232 pyrP F Permease
PAFACDOC_01093 2.3e-235 mepA V MATE efflux family protein
PAFACDOC_01094 9.3e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
PAFACDOC_01095 5.4e-181 1.1.1.1 C nadph quinone reductase
PAFACDOC_01096 2e-126 hchA S DJ-1/PfpI family
PAFACDOC_01097 3.6e-93 MA20_25245 K FR47-like protein
PAFACDOC_01098 8e-152 EG EamA-like transporter family
PAFACDOC_01099 2.1e-61 S Protein of unknown function
PAFACDOC_01100 8.2e-39 S Protein of unknown function
PAFACDOC_01101 0.0 tetP J elongation factor G
PAFACDOC_01102 1.6e-117 azoR C Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PAFACDOC_01103 5.5e-172 yobV1 K WYL domain
PAFACDOC_01104 3.2e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
PAFACDOC_01105 2.9e-81 6.3.3.2 S ASCH
PAFACDOC_01106 6.9e-254 1.14.14.9 Q 4-hydroxyphenylacetate
PAFACDOC_01107 5.7e-135 wzb 3.1.3.48 T Tyrosine phosphatase family
PAFACDOC_01108 7.4e-250 yjjP S Putative threonine/serine exporter
PAFACDOC_01109 6.7e-195 pva1 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAFACDOC_01110 2.7e-120 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PAFACDOC_01111 1.3e-290 QT PucR C-terminal helix-turn-helix domain
PAFACDOC_01112 1.3e-122 drgA C Nitroreductase family
PAFACDOC_01113 6.4e-159 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PAFACDOC_01114 2.3e-164 ptlF S KR domain
PAFACDOC_01115 1.1e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAFACDOC_01116 1e-72 C FMN binding
PAFACDOC_01117 5.7e-158 K LysR family
PAFACDOC_01118 1.3e-257 P Sodium:sulfate symporter transmembrane region
PAFACDOC_01119 0.0 nqr 1.3.5.4, 1.5.1.36 C FMN_bind
PAFACDOC_01120 1.8e-116 S Elongation factor G-binding protein, N-terminal
PAFACDOC_01121 5.2e-65 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PAFACDOC_01122 5.7e-67 pnb C nitroreductase
PAFACDOC_01123 4.2e-32 pnb C nitroreductase
PAFACDOC_01124 1.8e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
PAFACDOC_01125 7.2e-167 L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PAFACDOC_01126 1.7e-260 calB 1.2.1.68 C Belongs to the aldehyde dehydrogenase family
PAFACDOC_01127 1.5e-95 K Bacterial regulatory proteins, tetR family
PAFACDOC_01128 1.2e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAFACDOC_01129 6.8e-173 htrA 3.4.21.107 O serine protease
PAFACDOC_01130 8.9e-158 vicX 3.1.26.11 S domain protein
PAFACDOC_01131 2.2e-151 yycI S YycH protein
PAFACDOC_01132 1.2e-244 yycH S YycH protein
PAFACDOC_01133 0.0 vicK 2.7.13.3 T Histidine kinase
PAFACDOC_01134 6.2e-131 K response regulator
PAFACDOC_01136 1.7e-37
PAFACDOC_01137 1.6e-31 cspA K Cold shock protein domain
PAFACDOC_01138 1.3e-78 S Pyridoxamine 5'-phosphate oxidase
PAFACDOC_01139 0.0 trePP 2.4.1.216, 2.4.1.8, 3.1.3.12, 3.2.1.28 GH37,GH65 G Glycosyl hydrolase family 65 central catalytic domain
PAFACDOC_01140 1e-119 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PAFACDOC_01141 4.5e-143 S haloacid dehalogenase-like hydrolase
PAFACDOC_01142 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PAFACDOC_01143 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PAFACDOC_01144 2e-277 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PAFACDOC_01145 6.3e-197 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PAFACDOC_01146 1.5e-214 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PAFACDOC_01147 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PAFACDOC_01148 4.2e-276 E ABC transporter, substratebinding protein
PAFACDOC_01150 1.2e-227 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PAFACDOC_01151 3.6e-143 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAFACDOC_01152 8.8e-226 yttB EGP Major facilitator Superfamily
PAFACDOC_01153 7.8e-242 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PAFACDOC_01154 1.4e-67 rplI J Binds to the 23S rRNA
PAFACDOC_01155 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PAFACDOC_01156 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAFACDOC_01157 1e-59 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PAFACDOC_01158 1.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PAFACDOC_01159 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAFACDOC_01160 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAFACDOC_01161 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAFACDOC_01162 5e-37 yaaA S S4 domain protein YaaA
PAFACDOC_01163 2e-208 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAFACDOC_01164 9.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAFACDOC_01165 4.5e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PAFACDOC_01166 6.4e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAFACDOC_01167 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAFACDOC_01168 1e-309 E ABC transporter, substratebinding protein
PAFACDOC_01169 1.3e-237 Q Imidazolonepropionase and related amidohydrolases
PAFACDOC_01170 9.1e-109 jag S R3H domain protein
PAFACDOC_01171 4.6e-255 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAFACDOC_01172 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAFACDOC_01173 5.9e-92 S Cell surface protein
PAFACDOC_01174 3e-158 S Bacterial protein of unknown function (DUF916)
PAFACDOC_01176 1.1e-302
PAFACDOC_01177 1.2e-108 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PAFACDOC_01179 1.5e-255 pepC 3.4.22.40 E aminopeptidase
PAFACDOC_01180 8.4e-59 2.6.1.2, 2.6.1.66 K Bacteriophage CI repressor helix-turn-helix domain
PAFACDOC_01181 2.8e-157 degV S DegV family
PAFACDOC_01182 2.2e-87 yjaB_1 K Acetyltransferase (GNAT) domain
PAFACDOC_01183 6.7e-142 tesE Q hydratase
PAFACDOC_01184 4e-65 padC Q Phenolic acid decarboxylase
PAFACDOC_01185 2e-56 S Bacterial protein of unknown function (DUF916)
PAFACDOC_01186 5.1e-129 S WxL domain surface cell wall-binding
PAFACDOC_01187 1.3e-136 T Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
PAFACDOC_01188 1.3e-87 K Winged helix DNA-binding domain
PAFACDOC_01189 2.4e-116 luxT K Bacterial regulatory proteins, tetR family
PAFACDOC_01190 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PAFACDOC_01191 1.8e-27
PAFACDOC_01192 4.6e-279 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
PAFACDOC_01193 2e-72 mltD CBM50 M PFAM NLP P60 protein
PAFACDOC_01194 2.5e-53
PAFACDOC_01195 1.6e-61
PAFACDOC_01197 2.6e-65
PAFACDOC_01198 1.7e-07 4.1.1.46 S metal-dependent hydrolase of the TIM-barrel fold
PAFACDOC_01199 1.3e-102 K transcriptional regulator
PAFACDOC_01200 1.4e-181 yfeX P Peroxidase
PAFACDOC_01201 1.3e-136 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PAFACDOC_01202 6.3e-128 ydcF S Gram-negative-bacterium-type cell wall biogenesis
PAFACDOC_01203 1.1e-181 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
PAFACDOC_01204 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PAFACDOC_01205 6.3e-142 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAFACDOC_01206 1.5e-55 txlA O Thioredoxin-like domain
PAFACDOC_01207 4.3e-40 yrkD S Metal-sensitive transcriptional repressor
PAFACDOC_01208 1.2e-18
PAFACDOC_01209 6.6e-96 dps P Belongs to the Dps family
PAFACDOC_01210 1.6e-32 copZ P Heavy-metal-associated domain
PAFACDOC_01211 3.3e-118 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PAFACDOC_01212 0.0 pepO 3.4.24.71 O Peptidase family M13
PAFACDOC_01213 3.2e-83 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAFACDOC_01214 1.3e-262 nox C NADH oxidase
PAFACDOC_01215 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PAFACDOC_01216 6.1e-164 S Cell surface protein
PAFACDOC_01217 1.5e-118 S WxL domain surface cell wall-binding
PAFACDOC_01218 2.3e-99 S WxL domain surface cell wall-binding
PAFACDOC_01219 4.6e-45
PAFACDOC_01220 7.7e-103 K Bacterial regulatory proteins, tetR family
PAFACDOC_01221 1.5e-49
PAFACDOC_01222 1.4e-248 S Putative metallopeptidase domain
PAFACDOC_01223 3.9e-218 3.1.3.1 S associated with various cellular activities
PAFACDOC_01224 1.8e-108 aqpZ U Belongs to the MIP aquaporin (TC 1.A.8) family
PAFACDOC_01225 0.0 ubiB S ABC1 family
PAFACDOC_01226 1.4e-248 brnQ U Component of the transport system for branched-chain amino acids
PAFACDOC_01227 0.0 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PAFACDOC_01228 2.3e-229 mdtH P Sugar (and other) transporter
PAFACDOC_01229 2.1e-304 ram2 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
PAFACDOC_01230 2.5e-231 EGP Major facilitator Superfamily
PAFACDOC_01231 7.4e-183 rhaR K helix_turn_helix, arabinose operon control protein
PAFACDOC_01232 2.1e-38 fic D Fic/DOC family
PAFACDOC_01233 2.4e-22 fic D Fic/DOC family
PAFACDOC_01234 8e-76 K Helix-turn-helix XRE-family like proteins
PAFACDOC_01235 1.6e-180 galR K Transcriptional regulator
PAFACDOC_01236 2.9e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PAFACDOC_01237 3.4e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAFACDOC_01238 4.6e-224 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PAFACDOC_01239 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PAFACDOC_01240 9.1e-186 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PAFACDOC_01241 0.0 rafA 3.2.1.22 G alpha-galactosidase
PAFACDOC_01242 0.0 lacS G Transporter
PAFACDOC_01243 4.5e-199 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PAFACDOC_01244 1.1e-173 galR K Transcriptional regulator
PAFACDOC_01245 3.1e-192 C Aldo keto reductase family protein
PAFACDOC_01246 5.2e-65 S pyridoxamine 5-phosphate
PAFACDOC_01247 0.0 1.3.5.4 C FAD binding domain
PAFACDOC_01248 4.8e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAFACDOC_01249 2.1e-129 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PAFACDOC_01250 2.7e-214 ydiM G Transporter
PAFACDOC_01251 4.2e-169 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PAFACDOC_01252 3.4e-163 K Transcriptional regulator, LysR family
PAFACDOC_01253 1.8e-210 ydiN G Major Facilitator Superfamily
PAFACDOC_01254 1e-63
PAFACDOC_01255 3.4e-154 estA S Putative esterase
PAFACDOC_01256 1.2e-134 K UTRA domain
PAFACDOC_01257 6.2e-249 pts29C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_01258 3.7e-163 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PAFACDOC_01259 2.2e-157 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PAFACDOC_01260 1.1e-211 S Bacterial protein of unknown function (DUF871)
PAFACDOC_01261 1.4e-291 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAFACDOC_01262 0.0 pts30BCA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PAFACDOC_01263 1.3e-154 licT K CAT RNA binding domain
PAFACDOC_01264 1.7e-292 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAFACDOC_01265 5.5e-291 pbg10 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAFACDOC_01266 0.0 bglP 2.7.1.193, 2.7.1.211 G phosphotransferase system
PAFACDOC_01267 3.8e-159 licT K CAT RNA binding domain
PAFACDOC_01268 0.0 treP 2.4.1.64 GH65 G hydrolase, family 65, central catalytic
PAFACDOC_01269 1.1e-173 K Transcriptional regulator, LacI family
PAFACDOC_01270 2.3e-270 G Major Facilitator
PAFACDOC_01271 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PAFACDOC_01272 1.4e-78 K Acetyltransferase (GNAT) domain
PAFACDOC_01273 5.1e-209 mccF V LD-carboxypeptidase
PAFACDOC_01274 2.8e-241 M Glycosyltransferase, group 2 family protein
PAFACDOC_01275 1.7e-72 S SnoaL-like domain
PAFACDOC_01276 2.8e-145 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PAFACDOC_01277 6.1e-244 P Major Facilitator Superfamily
PAFACDOC_01278 1.2e-46 K helix_turn_helix, Arsenical Resistance Operon Repressor
PAFACDOC_01279 1.8e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PAFACDOC_01281 3.2e-56 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PAFACDOC_01282 8.3e-110 ypsA S Belongs to the UPF0398 family
PAFACDOC_01283 7.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PAFACDOC_01284 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PAFACDOC_01285 7e-178 phnT 3.6.3.30 P ATPases associated with a variety of cellular activities
PAFACDOC_01286 4.9e-182 ftpB P Bacterial extracellular solute-binding protein
PAFACDOC_01287 1.2e-302 ftpA P Binding-protein-dependent transport system inner membrane component
PAFACDOC_01288 4.4e-83 uspA T Universal stress protein family
PAFACDOC_01289 2.1e-157 metQ_4 P Belongs to the nlpA lipoprotein family
PAFACDOC_01290 2e-99 metI P ABC transporter permease
PAFACDOC_01291 7e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAFACDOC_01293 1.1e-127 dnaD L Replication initiation and membrane attachment
PAFACDOC_01294 5.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PAFACDOC_01295 1.1e-225 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PAFACDOC_01296 2.1e-72 ypmB S protein conserved in bacteria
PAFACDOC_01297 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PAFACDOC_01298 4e-170 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PAFACDOC_01299 7.4e-175 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PAFACDOC_01300 1.1e-203 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PAFACDOC_01301 9.6e-197 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PAFACDOC_01302 3e-195 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PAFACDOC_01303 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PAFACDOC_01304 2.5e-250 malT G Major Facilitator
PAFACDOC_01305 1.5e-89 S Domain of unknown function (DUF4767)
PAFACDOC_01306 2.3e-267 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PAFACDOC_01307 1.2e-149 yitU 3.1.3.104 S hydrolase
PAFACDOC_01308 1.4e-265 yfnA E Amino Acid
PAFACDOC_01309 3.3e-258 gabT 2.6.1.19, 5.1.1.21 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PAFACDOC_01310 2.4e-43
PAFACDOC_01311 1.9e-49
PAFACDOC_01312 1.4e-136 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 U Ion channel
PAFACDOC_01313 1.4e-170 2.5.1.74 H UbiA prenyltransferase family
PAFACDOC_01314 2.7e-252 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAFACDOC_01315 1.8e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PAFACDOC_01316 8.6e-281 pipD E Dipeptidase
PAFACDOC_01317 9.4e-40
PAFACDOC_01318 4.8e-29 S CsbD-like
PAFACDOC_01319 6.5e-41 S transglycosylase associated protein
PAFACDOC_01320 3.1e-14
PAFACDOC_01321 2.9e-35
PAFACDOC_01322 3.5e-163 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
PAFACDOC_01323 1e-65 S Protein of unknown function (DUF805)
PAFACDOC_01324 6.3e-76 uspA T Belongs to the universal stress protein A family
PAFACDOC_01325 1.9e-67 tspO T TspO/MBR family
PAFACDOC_01326 7.9e-41
PAFACDOC_01327 3e-44 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
PAFACDOC_01328 4.5e-114 1.14.99.53 AA10 S Lytic polysaccharide mono-oxygenase, cellulose-degrading
PAFACDOC_01329 2.3e-29 L hmm pf00665
PAFACDOC_01330 1.8e-207 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PAFACDOC_01331 1.3e-28
PAFACDOC_01332 8.5e-54
PAFACDOC_01333 1.2e-139 f42a O Band 7 protein
PAFACDOC_01334 1.4e-301 norB EGP Major Facilitator
PAFACDOC_01335 7.5e-92 K transcriptional regulator
PAFACDOC_01336 1.9e-192 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAFACDOC_01337 1.7e-87 ykhA 3.1.2.20 I Thioesterase superfamily
PAFACDOC_01338 1.6e-160 K LysR substrate binding domain
PAFACDOC_01339 2.2e-123 S Protein of unknown function (DUF554)
PAFACDOC_01340 1.4e-98 2.7.8.7 H Belongs to the P-Pant transferase superfamily
PAFACDOC_01341 1.5e-135 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PAFACDOC_01342 3e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PAFACDOC_01343 1.6e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PAFACDOC_01344 1.2e-260 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PAFACDOC_01345 6.1e-70 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PAFACDOC_01346 2.3e-73 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PAFACDOC_01347 1.4e-226 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAFACDOC_01348 2.1e-126 IQ reductase
PAFACDOC_01349 1.3e-168 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PAFACDOC_01350 3.8e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAFACDOC_01351 2.9e-179 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAFACDOC_01352 2.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PAFACDOC_01353 1.1e-178 yneE K Transcriptional regulator
PAFACDOC_01354 3e-145 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PAFACDOC_01356 2.1e-58 S Protein of unknown function (DUF1648)
PAFACDOC_01357 5.1e-198 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PAFACDOC_01358 1.3e-215 3.5.1.47 E Peptidase family M20/M25/M40
PAFACDOC_01359 5.8e-217 E glutamate:sodium symporter activity
PAFACDOC_01360 1.6e-67 ybbJ K Acetyltransferase (GNAT) family
PAFACDOC_01361 4.8e-165 1.6.5.5 C Zinc-binding dehydrogenase
PAFACDOC_01362 2e-97 entB 3.5.1.19 Q Isochorismatase family
PAFACDOC_01363 3.9e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PAFACDOC_01364 3e-226 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAFACDOC_01365 4.1e-110 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PAFACDOC_01366 1.4e-128 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PAFACDOC_01367 1.2e-167 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PAFACDOC_01368 1.5e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH Peptidase C26
PAFACDOC_01369 5.4e-267 trpE 4.1.3.27 EH Anthranilate synthase component I, N terminal region
PAFACDOC_01371 1.5e-270 XK27_00765
PAFACDOC_01372 2.3e-139 ecsA_2 V AAA domain, putative AbiEii toxin, Type IV TA system
PAFACDOC_01373 5.3e-86
PAFACDOC_01374 6.4e-156 pelX UW LPXTG-motif cell wall anchor domain protein
PAFACDOC_01375 1e-259 pgi 5.3.1.9 G Belongs to the GPI family
PAFACDOC_01376 6.8e-24
PAFACDOC_01377 0.0 macB3 V ABC transporter, ATP-binding protein
PAFACDOC_01378 2e-198 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PAFACDOC_01379 2e-61 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PAFACDOC_01380 0.0 msbA2 3.6.3.44 P ABC transporter transmembrane region
PAFACDOC_01381 1.6e-16
PAFACDOC_01382 5.5e-18
PAFACDOC_01383 1.5e-14
PAFACDOC_01384 4.7e-16
PAFACDOC_01385 1.5e-14
PAFACDOC_01386 2.5e-77 M MucBP domain
PAFACDOC_01387 0.0 bztC D nuclear chromosome segregation
PAFACDOC_01388 7.3e-83 K MarR family
PAFACDOC_01389 1.4e-43
PAFACDOC_01390 2e-38
PAFACDOC_01391 6.4e-226 sip L Belongs to the 'phage' integrase family
PAFACDOC_01395 1.6e-29
PAFACDOC_01396 4.1e-147 L DNA replication protein
PAFACDOC_01397 7.9e-263 S Virulence-associated protein E
PAFACDOC_01398 7e-74
PAFACDOC_01400 4.6e-47 S head-tail joining protein
PAFACDOC_01401 1.6e-67 L Phage-associated protein
PAFACDOC_01402 2.5e-83 terS L Phage terminase, small subunit
PAFACDOC_01403 0.0 terL S overlaps another CDS with the same product name
PAFACDOC_01405 1.1e-203 S Phage portal protein
PAFACDOC_01406 7.2e-278 S Caudovirus prohead serine protease
PAFACDOC_01407 1.1e-35 S Phage gp6-like head-tail connector protein
PAFACDOC_01408 3.6e-61
PAFACDOC_01411 8.9e-30
PAFACDOC_01413 7.3e-219 int L Belongs to the 'phage' integrase family
PAFACDOC_01417 4.1e-13 S DNA/RNA non-specific endonuclease
PAFACDOC_01419 8.4e-37
PAFACDOC_01420 3.3e-76 E IrrE N-terminal-like domain
PAFACDOC_01421 4.5e-61 yvaO K Helix-turn-helix domain
PAFACDOC_01422 1.3e-37 K Helix-turn-helix
PAFACDOC_01424 4.5e-54
PAFACDOC_01425 2.8e-85
PAFACDOC_01427 1.6e-54 S Bacteriophage Mu Gam like protein
PAFACDOC_01428 1.4e-64
PAFACDOC_01429 2.5e-161 L DnaD domain protein
PAFACDOC_01430 2.2e-50
PAFACDOC_01431 8.4e-85
PAFACDOC_01432 1.2e-64 rusA 3.1.22.4 L Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
PAFACDOC_01434 2.4e-13 S YopX protein
PAFACDOC_01435 4.1e-14
PAFACDOC_01439 1.3e-79 K acetyltransferase
PAFACDOC_01440 6.6e-31 rplV S ASCH
PAFACDOC_01441 2.2e-17
PAFACDOC_01443 3.5e-11
PAFACDOC_01444 2e-75 ps333 L Terminase small subunit
PAFACDOC_01446 8.7e-248 S Phage terminase, large subunit
PAFACDOC_01447 7.6e-305 S Phage portal protein, SPP1 Gp6-like
PAFACDOC_01448 2.9e-168 S Phage Mu protein F like protein
PAFACDOC_01449 8.6e-71 S Domain of unknown function (DUF4355)
PAFACDOC_01450 1.5e-194 gpG
PAFACDOC_01451 1.5e-56 S Phage gp6-like head-tail connector protein
PAFACDOC_01452 1.7e-50
PAFACDOC_01453 3.6e-94
PAFACDOC_01454 4.1e-61
PAFACDOC_01455 6.7e-96
PAFACDOC_01456 4.3e-83 S Phage tail assembly chaperone protein, TAC
PAFACDOC_01458 0.0 D NLP P60 protein
PAFACDOC_01459 8.1e-134 S phage tail
PAFACDOC_01460 1e-289 M Prophage endopeptidase tail
PAFACDOC_01461 1.2e-172 E GDSL-like Lipase/Acylhydrolase family
PAFACDOC_01462 3.3e-96 S Domain of unknown function (DUF2479)
PAFACDOC_01463 2.6e-15 S Domain of unknown function (DUF2479)
PAFACDOC_01466 1e-87
PAFACDOC_01467 5.9e-21
PAFACDOC_01469 2.2e-200 lys M Glycosyl hydrolases family 25
PAFACDOC_01470 2.4e-35 S Haemolysin XhlA
PAFACDOC_01471 2.7e-27 hol S Bacteriophage holin
PAFACDOC_01472 3.3e-61 V Abortive infection bacteriophage resistance protein
PAFACDOC_01474 1.3e-132 yxkH G Polysaccharide deacetylase
PAFACDOC_01475 3.3e-65 S Protein of unknown function (DUF1093)
PAFACDOC_01476 2.2e-310 ycfI V ABC transporter, ATP-binding protein
PAFACDOC_01477 0.0 yfiC V ABC transporter
PAFACDOC_01478 2.8e-126
PAFACDOC_01479 1.9e-58
PAFACDOC_01480 1e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PAFACDOC_01481 5.2e-29
PAFACDOC_01482 1.2e-191 ampC V Beta-lactamase
PAFACDOC_01483 2.8e-195 manA 5.3.1.8 G mannose-6-phosphate isomerase
PAFACDOC_01484 6.5e-136 cobQ S glutamine amidotransferase
PAFACDOC_01485 4.4e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PAFACDOC_01486 9.3e-109 tdk 2.7.1.21 F thymidine kinase
PAFACDOC_01487 1.2e-197 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAFACDOC_01488 3.9e-159 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAFACDOC_01489 2e-191 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PAFACDOC_01490 2.9e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAFACDOC_01491 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAFACDOC_01492 7.3e-183 S Oxidoreductase family, NAD-binding Rossmann fold
PAFACDOC_01493 3.4e-112 acmA 3.2.1.17 NU mannosyl-glycoprotein
PAFACDOC_01494 9.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAFACDOC_01495 1e-93 S UPF0316 protein
PAFACDOC_01496 1.3e-218 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PAFACDOC_01497 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PAFACDOC_01498 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAFACDOC_01499 2.6e-198 camS S sex pheromone
PAFACDOC_01500 3.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAFACDOC_01501 2.5e-275 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAFACDOC_01502 7.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAFACDOC_01503 1e-190 yegS 2.7.1.107 G Lipid kinase
PAFACDOC_01504 4e-259 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAFACDOC_01505 6e-100 yobS K Bacterial regulatory proteins, tetR family
PAFACDOC_01506 0.0 yfgQ P E1-E2 ATPase
PAFACDOC_01507 4e-240 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_01508 6.1e-168 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_01509 2.3e-151 gntR K rpiR family
PAFACDOC_01510 2e-143 lys M Glycosyl hydrolases family 25
PAFACDOC_01511 1.1e-62 S Domain of unknown function (DUF4828)
PAFACDOC_01512 2.7e-31 cspA K 'Cold-shock' DNA-binding domain
PAFACDOC_01513 2.4e-189 mocA S Oxidoreductase
PAFACDOC_01514 2.6e-239 yfmL 3.6.4.13 L DEAD DEAH box helicase
PAFACDOC_01516 2.3e-75 T Universal stress protein family
PAFACDOC_01517 2.9e-243 pts14C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_01518 2e-163 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_01520 1.3e-73
PAFACDOC_01521 1.4e-106
PAFACDOC_01522 8.4e-254 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PAFACDOC_01523 1.2e-219 pbpX1 V Beta-lactamase
PAFACDOC_01524 1.5e-208 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAFACDOC_01525 1.4e-154 yihY S Belongs to the UPF0761 family
PAFACDOC_01526 9.7e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAFACDOC_01527 2.2e-17 L Helix-turn-helix domain
PAFACDOC_01528 3.8e-53
PAFACDOC_01529 7.3e-33 S Protein of unknown function (DUF2922)
PAFACDOC_01530 7e-30
PAFACDOC_01531 1.3e-25
PAFACDOC_01532 6.8e-101 K DNA-templated transcription, initiation
PAFACDOC_01533 3e-125
PAFACDOC_01534 2.2e-140 recX 2.4.1.337 GT4 S Regulatory protein RecX
PAFACDOC_01535 4.1e-106 ygaC J Belongs to the UPF0374 family
PAFACDOC_01536 2.5e-133 cwlO M NlpC/P60 family
PAFACDOC_01537 7.8e-48 K sequence-specific DNA binding
PAFACDOC_01538 1.3e-27 S Antitoxin component of a toxin-antitoxin (TA) module
PAFACDOC_01539 3.4e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PAFACDOC_01540 9.3e-188 yueF S AI-2E family transporter
PAFACDOC_01541 3.7e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PAFACDOC_01542 9.5e-213 gntP EG Gluconate
PAFACDOC_01543 3e-292 gntK 2.7.1.12, 2.7.1.16, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
PAFACDOC_01544 1.7e-170 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
PAFACDOC_01545 2.4e-253 gor 1.8.1.7 C Glutathione reductase
PAFACDOC_01546 6.9e-308 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PAFACDOC_01547 1.7e-273
PAFACDOC_01548 2.7e-196 M MucBP domain
PAFACDOC_01549 7.1e-161 lysR5 K LysR substrate binding domain
PAFACDOC_01550 5.5e-126 yxaA S membrane transporter protein
PAFACDOC_01551 3.2e-57 ywjH S Protein of unknown function (DUF1634)
PAFACDOC_01552 1.3e-309 oppA E ABC transporter, substratebinding protein
PAFACDOC_01553 2.3e-165 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAFACDOC_01554 1.1e-189 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAFACDOC_01555 9.2e-203 oppD P Belongs to the ABC transporter superfamily
PAFACDOC_01556 1.8e-181 oppF P Belongs to the ABC transporter superfamily
PAFACDOC_01557 1e-63 K Winged helix DNA-binding domain
PAFACDOC_01558 2.2e-73 L Integrase
PAFACDOC_01559 0.0 clpE O Belongs to the ClpA ClpB family
PAFACDOC_01560 6.5e-30
PAFACDOC_01561 2.7e-39 ptsH G phosphocarrier protein HPR
PAFACDOC_01562 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAFACDOC_01563 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PAFACDOC_01564 6.9e-200 cpoA GT4 M Glycosyltransferase, group 1 family protein
PAFACDOC_01565 7.4e-189 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAFACDOC_01566 1.9e-228 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PAFACDOC_01567 1.1e-225 patA 2.6.1.1 E Aminotransferase
PAFACDOC_01568 1.1e-34 ykuJ S Protein of unknown function (DUF1797)
PAFACDOC_01569 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAFACDOC_01570 4.5e-123 yliE T EAL domain
PAFACDOC_01571 6.4e-148 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PAFACDOC_01572 3.1e-104 K Bacterial regulatory proteins, tetR family
PAFACDOC_01573 1.2e-207 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PAFACDOC_01574 1.5e-52
PAFACDOC_01575 3e-72
PAFACDOC_01576 3e-131 1.5.1.39 C nitroreductase
PAFACDOC_01577 8.8e-154 G Transmembrane secretion effector
PAFACDOC_01578 3.1e-297 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAFACDOC_01579 2.1e-143
PAFACDOC_01581 1.9e-71 spxA 1.20.4.1 P ArsC family
PAFACDOC_01582 1.5e-33
PAFACDOC_01583 2.5e-89 V VanZ like family
PAFACDOC_01584 3.6e-242 EGP Major facilitator Superfamily
PAFACDOC_01585 3.2e-175 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PAFACDOC_01586 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PAFACDOC_01587 4.1e-289 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PAFACDOC_01588 2.5e-152 licD M LicD family
PAFACDOC_01589 1.2e-82 K Transcriptional regulator
PAFACDOC_01590 1.5e-19
PAFACDOC_01591 1.2e-225 pbuG S permease
PAFACDOC_01592 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAFACDOC_01593 1.8e-153 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PAFACDOC_01594 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAFACDOC_01595 5.4e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PAFACDOC_01596 5.9e-180 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PAFACDOC_01597 0.0 oatA I Acyltransferase
PAFACDOC_01598 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PAFACDOC_01599 1.1e-68 O OsmC-like protein
PAFACDOC_01600 2.6e-46
PAFACDOC_01601 1.1e-251 yfnA E Amino Acid
PAFACDOC_01602 2.5e-88
PAFACDOC_01603 1.6e-146 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PAFACDOC_01604 4.6e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PAFACDOC_01605 1.8e-19
PAFACDOC_01606 1.2e-103 gmk2 2.7.4.8 F Guanylate kinase
PAFACDOC_01607 1.3e-81 zur P Belongs to the Fur family
PAFACDOC_01608 7.1e-12 3.2.1.14 GH18
PAFACDOC_01609 4.9e-148
PAFACDOC_01610 1.7e-73 gph 3.1.3.18 S HAD hydrolase, family IA, variant
PAFACDOC_01611 3.2e-184 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PAFACDOC_01612 9.5e-170 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAFACDOC_01613 3.6e-41
PAFACDOC_01615 9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAFACDOC_01616 7.8e-149 glnH ET ABC transporter substrate-binding protein
PAFACDOC_01617 1.6e-109 gluC P ABC transporter permease
PAFACDOC_01618 4e-108 glnP P ABC transporter permease
PAFACDOC_01619 4.4e-83 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAFACDOC_01620 1.4e-153 K CAT RNA binding domain
PAFACDOC_01621 4.4e-256 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PAFACDOC_01622 6.1e-140 G YdjC-like protein
PAFACDOC_01623 1.4e-245 steT E amino acid
PAFACDOC_01624 7.4e-74 mgrA K helix_turn_helix multiple antibiotic resistance protein
PAFACDOC_01625 3.7e-149 XK27_00825 S Sulfite exporter TauE/SafE
PAFACDOC_01626 2.8e-70 K MarR family
PAFACDOC_01627 4.9e-210 EGP Major facilitator Superfamily
PAFACDOC_01628 3.8e-85 S membrane transporter protein
PAFACDOC_01629 7.1e-98 K Bacterial regulatory proteins, tetR family
PAFACDOC_01630 8.7e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAFACDOC_01631 2.9e-78 3.6.1.55 F NUDIX domain
PAFACDOC_01632 1.3e-48 sugE U Multidrug resistance protein
PAFACDOC_01633 1.2e-26
PAFACDOC_01634 5.5e-129 pgm3 G Phosphoglycerate mutase family
PAFACDOC_01635 4.7e-125 pgm3 G Phosphoglycerate mutase family
PAFACDOC_01636 0.0 yjbQ P TrkA C-terminal domain protein
PAFACDOC_01637 3.1e-178 yqkA 3.6.1.55 F Belongs to the Nudix hydrolase family
PAFACDOC_01638 7.2e-110 dedA S SNARE associated Golgi protein
PAFACDOC_01639 0.0 helD 3.6.4.12 L DNA helicase
PAFACDOC_01640 2.5e-164 fabK 1.3.1.9 S Nitronate monooxygenase
PAFACDOC_01641 2.5e-177 coaA 2.7.1.33 F Pantothenic acid kinase
PAFACDOC_01642 2.5e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PAFACDOC_01644 5.1e-143 spoVK O ATPase family associated with various cellular activities (AAA)
PAFACDOC_01646 7.6e-46 L Helix-turn-helix domain
PAFACDOC_01647 6.9e-29 L hmm pf00665
PAFACDOC_01648 8.9e-23 L hmm pf00665
PAFACDOC_01649 4.3e-78
PAFACDOC_01650 6.2e-50
PAFACDOC_01651 1.7e-63 K Helix-turn-helix XRE-family like proteins
PAFACDOC_01652 0.0 yfbS P Sodium:sulfate symporter transmembrane region
PAFACDOC_01653 2.1e-305 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
PAFACDOC_01654 8.5e-176 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain
PAFACDOC_01655 7.4e-112 cysC 2.7.1.25, 2.7.7.4 F Catalyzes the synthesis of activated sulfate
PAFACDOC_01656 1.6e-229 sat 2.7.7.4 H the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
PAFACDOC_01657 1.2e-307 S Protein conserved in bacteria
PAFACDOC_01658 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PAFACDOC_01659 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PAFACDOC_01660 3.6e-58 S Protein of unknown function (DUF1516)
PAFACDOC_01661 1.9e-89 gtcA S Teichoic acid glycosylation protein
PAFACDOC_01662 2.1e-180
PAFACDOC_01663 3.5e-10
PAFACDOC_01664 5.9e-52
PAFACDOC_01667 0.0 uvrA2 L ABC transporter
PAFACDOC_01668 2.5e-46
PAFACDOC_01669 1e-90
PAFACDOC_01670 1.6e-85 ohrR K helix_turn_helix multiple antibiotic resistance protein
PAFACDOC_01671 1.9e-113 S CAAX protease self-immunity
PAFACDOC_01672 2.5e-59
PAFACDOC_01673 4.5e-55
PAFACDOC_01674 1.6e-137 pltR K LytTr DNA-binding domain
PAFACDOC_01675 2.5e-223 pltK 2.7.13.3 T GHKL domain
PAFACDOC_01676 1.7e-108
PAFACDOC_01677 3.2e-147 S Sucrose-6F-phosphate phosphohydrolase
PAFACDOC_01678 9.3e-159 ypaH EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PAFACDOC_01679 3.5e-117 GM NAD(P)H-binding
PAFACDOC_01680 1.6e-64 K helix_turn_helix, mercury resistance
PAFACDOC_01681 3.1e-155 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAFACDOC_01683 4e-176 K LytTr DNA-binding domain
PAFACDOC_01684 2.3e-156 V ABC transporter
PAFACDOC_01685 2.6e-124 V Transport permease protein
PAFACDOC_01687 3.9e-179 XK27_06930 V domain protein
PAFACDOC_01688 5.5e-41 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAFACDOC_01689 3.8e-119 dck 2.7.1.74 F deoxynucleoside kinase
PAFACDOC_01690 2.5e-180 ugpB G Bacterial extracellular solute-binding protein
PAFACDOC_01691 1.1e-150 ugpE G ABC transporter permease
PAFACDOC_01692 5.2e-173 ugpA U Binding-protein-dependent transport system inner membrane component
PAFACDOC_01693 5.2e-201 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
PAFACDOC_01694 4.1e-84 uspA T Belongs to the universal stress protein A family
PAFACDOC_01695 1.4e-272 pepV 3.5.1.18 E dipeptidase PepV
PAFACDOC_01696 1.9e-150 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAFACDOC_01697 1.8e-136 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAFACDOC_01698 3e-301 ytgP S Polysaccharide biosynthesis protein
PAFACDOC_01699 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAFACDOC_01700 1.4e-124 3.6.1.27 I Acid phosphatase homologues
PAFACDOC_01701 1.2e-94 ytqB 2.1.1.176 J Putative rRNA methylase
PAFACDOC_01702 4.2e-29
PAFACDOC_01703 2.2e-298 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
PAFACDOC_01704 3.3e-267 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
PAFACDOC_01705 0.0 S Pfam Methyltransferase
PAFACDOC_01708 1.7e-18 N Cell shape-determining protein MreB
PAFACDOC_01709 5.5e-278 bmr3 EGP Major facilitator Superfamily
PAFACDOC_01710 4.1e-212 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAFACDOC_01711 1.6e-121
PAFACDOC_01712 1.5e-291 tagE1 2.4.1.52 GT4 M Glycosyl transferases group 1
PAFACDOC_01713 7.5e-169 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PAFACDOC_01714 9.2e-256 mmuP E amino acid
PAFACDOC_01715 4e-189 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PAFACDOC_01716 3.7e-230 mntH P H( )-stimulated, divalent metal cation uptake system
PAFACDOC_01718 3.3e-104 T Calcineurin-like phosphoesterase superfamily domain
PAFACDOC_01719 8.6e-37 T Calcineurin-like phosphoesterase superfamily domain
PAFACDOC_01720 2e-94 K Acetyltransferase (GNAT) domain
PAFACDOC_01721 1.4e-95
PAFACDOC_01722 8.9e-182 P secondary active sulfate transmembrane transporter activity
PAFACDOC_01723 2.8e-91 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
PAFACDOC_01729 5.1e-08
PAFACDOC_01734 3.1e-116 P cobalt transport
PAFACDOC_01735 2e-258 P ABC transporter
PAFACDOC_01736 3.1e-101 S ABC transporter permease
PAFACDOC_01737 4.8e-90 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PAFACDOC_01738 1.4e-158 dkgB S reductase
PAFACDOC_01739 5.3e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAFACDOC_01740 1e-69
PAFACDOC_01741 4.7e-31 ygzD K Transcriptional
PAFACDOC_01742 7.4e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAFACDOC_01743 2.2e-173 P Major Facilitator Superfamily
PAFACDOC_01744 5.9e-224 1.3.5.4 C FAD dependent oxidoreductase
PAFACDOC_01745 4.8e-99 K Helix-turn-helix domain
PAFACDOC_01746 7.4e-277 pipD E Dipeptidase
PAFACDOC_01747 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PAFACDOC_01748 0.0 mtlR K Mga helix-turn-helix domain
PAFACDOC_01749 1.7e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_01750 8.1e-221 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PAFACDOC_01751 2.1e-73
PAFACDOC_01752 6.2e-57 trxA1 O Belongs to the thioredoxin family
PAFACDOC_01753 1.2e-49
PAFACDOC_01754 6.2e-94
PAFACDOC_01755 7.7e-62
PAFACDOC_01756 5e-81 ndk 2.7.4.6 F Belongs to the NDK family
PAFACDOC_01757 8.4e-254 S Uncharacterized protein conserved in bacteria (DUF2252)
PAFACDOC_01758 3.5e-97 yieF S NADPH-dependent FMN reductase
PAFACDOC_01759 1.2e-94 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
PAFACDOC_01760 1.4e-209 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PAFACDOC_01761 2.5e-164 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PAFACDOC_01762 7.8e-159 map 3.4.11.18 E Methionine Aminopeptidase
PAFACDOC_01763 4.3e-141 pnuC H nicotinamide mononucleotide transporter
PAFACDOC_01764 7.3e-43 S Protein of unknown function (DUF2089)
PAFACDOC_01765 2.9e-42
PAFACDOC_01766 3.5e-129 treR K UTRA
PAFACDOC_01767 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PAFACDOC_01768 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PAFACDOC_01769 0.0 pts4ABC 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
PAFACDOC_01770 1.4e-144
PAFACDOC_01771 4.9e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PAFACDOC_01772 5.8e-238 tagF1 2.7.8.12, 2.7.8.45 M glycerophosphotransferase
PAFACDOC_01773 0.0 tagF2 2.7.8.12 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAFACDOC_01774 5.9e-100 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PAFACDOC_01775 3.5e-70
PAFACDOC_01776 1.8e-72 K Transcriptional regulator
PAFACDOC_01777 3.7e-120 K Bacterial regulatory proteins, tetR family
PAFACDOC_01778 6.5e-233 mntH P H( )-stimulated, divalent metal cation uptake system
PAFACDOC_01779 5.1e-116
PAFACDOC_01780 5.9e-38
PAFACDOC_01781 1.4e-40
PAFACDOC_01782 1.1e-251 ydiC1 EGP Major facilitator Superfamily
PAFACDOC_01783 3.3e-65 K helix_turn_helix, mercury resistance
PAFACDOC_01784 9.8e-250 T PhoQ Sensor
PAFACDOC_01785 7e-127 K Transcriptional regulatory protein, C terminal
PAFACDOC_01786 4.1e-49
PAFACDOC_01787 2.7e-129 yidA K Helix-turn-helix domain, rpiR family
PAFACDOC_01788 1e-243 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_01789 3.2e-55
PAFACDOC_01790 2.1e-41
PAFACDOC_01791 3.2e-184 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAFACDOC_01792 1.1e-256 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
PAFACDOC_01793 1.3e-47
PAFACDOC_01794 2.7e-123 2.7.6.5 S RelA SpoT domain protein
PAFACDOC_01795 3.1e-104 K transcriptional regulator
PAFACDOC_01796 0.0 ydgH S MMPL family
PAFACDOC_01797 1.1e-106 tag 3.2.2.20 L glycosylase
PAFACDOC_01798 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PAFACDOC_01799 1.8e-185 yclI V MacB-like periplasmic core domain
PAFACDOC_01800 7.1e-121 yclH V ABC transporter
PAFACDOC_01801 2.5e-114 V CAAX protease self-immunity
PAFACDOC_01802 4.5e-121 S CAAX protease self-immunity
PAFACDOC_01803 2.2e-167 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PAFACDOC_01804 1.6e-140 S Belongs to the UPF0246 family
PAFACDOC_01805 6e-76
PAFACDOC_01806 3.2e-308 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PAFACDOC_01807 7e-141
PAFACDOC_01809 2.3e-142 2.7.7.47 H Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
PAFACDOC_01810 4.8e-40
PAFACDOC_01811 7.8e-129 cbiO P ABC transporter
PAFACDOC_01812 2.6e-149 P Cobalt transport protein
PAFACDOC_01813 4.8e-182 nikMN P PDGLE domain
PAFACDOC_01814 2.1e-120 K Crp-like helix-turn-helix domain
PAFACDOC_01815 1e-240 larA 5.1.2.1 S Domain of unknown function (DUF2088)
PAFACDOC_01816 5.9e-124 larB S AIR carboxylase
PAFACDOC_01817 8.5e-131 larC 4.99.1.12 S Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
PAFACDOC_01818 1.5e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAFACDOC_01819 6.3e-151 larE S NAD synthase
PAFACDOC_01820 5.5e-178 1.6.5.5 C Zinc-binding dehydrogenase
PAFACDOC_01822 1.3e-137 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PAFACDOC_01823 5.3e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PAFACDOC_01824 1.3e-111 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PAFACDOC_01825 9.9e-206 cytX U Belongs to the purine-cytosine permease (2.A.39) family
PAFACDOC_01826 4.3e-135 S peptidase C26
PAFACDOC_01827 9.8e-302 L HIRAN domain
PAFACDOC_01828 3.4e-85 F NUDIX domain
PAFACDOC_01829 2.6e-250 yifK E Amino acid permease
PAFACDOC_01830 5.2e-122
PAFACDOC_01831 3.3e-149 ydjP I Alpha/beta hydrolase family
PAFACDOC_01832 0.0 pacL1 P P-type ATPase
PAFACDOC_01833 2.9e-142 2.4.2.3 F Phosphorylase superfamily
PAFACDOC_01834 1.6e-28 KT PspC domain
PAFACDOC_01835 3.6e-111 S NADPH-dependent FMN reductase
PAFACDOC_01836 1.2e-74 papX3 K Transcriptional regulator
PAFACDOC_01837 4.6e-73 hsp1 O Belongs to the small heat shock protein (HSP20) family
PAFACDOC_01838 5.8e-82 S Protein of unknown function (DUF3021)
PAFACDOC_01839 4.7e-227 mdtG EGP Major facilitator Superfamily
PAFACDOC_01840 5e-51 cadC1 K helix_turn_helix, Arsenical Resistance Operon Repressor
PAFACDOC_01841 8.1e-216 yeaN P Transporter, major facilitator family protein
PAFACDOC_01843 3.4e-160 S reductase
PAFACDOC_01844 1.2e-165 1.1.1.65 C Aldo keto reductase
PAFACDOC_01845 4.5e-82 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase like
PAFACDOC_01846 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
PAFACDOC_01847 7.8e-49
PAFACDOC_01848 2.2e-258
PAFACDOC_01849 4e-209 C Oxidoreductase
PAFACDOC_01850 4.9e-151 cbiQ P cobalt transport
PAFACDOC_01851 0.0 ykoD P ABC transporter, ATP-binding protein
PAFACDOC_01852 2.5e-98 S UPF0397 protein
PAFACDOC_01854 1.6e-129 K UbiC transcription regulator-associated domain protein
PAFACDOC_01855 8.3e-54 K Transcriptional regulator PadR-like family
PAFACDOC_01856 3e-134
PAFACDOC_01857 5.8e-149
PAFACDOC_01858 9.1e-89
PAFACDOC_01859 1.6e-143 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PAFACDOC_01860 2e-169 yjjC V ABC transporter
PAFACDOC_01861 4.3e-297 M Exporter of polyketide antibiotics
PAFACDOC_01862 1.1e-116 K Transcriptional regulator
PAFACDOC_01863 1.8e-276 C Electron transfer flavoprotein FAD-binding domain
PAFACDOC_01864 9.5e-73 folT 2.7.13.3 T ECF transporter, substrate-specific component
PAFACDOC_01866 1.9e-92 K Bacterial regulatory proteins, tetR family
PAFACDOC_01867 2.2e-190 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PAFACDOC_01868 8e-185 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PAFACDOC_01869 5.5e-101 dhaL 2.7.1.121 S Dak2
PAFACDOC_01870 9e-57 dhaM 2.7.1.121 S PTS system fructose IIA component
PAFACDOC_01871 7.3e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAFACDOC_01872 1e-190 malR K Transcriptional regulator, LacI family
PAFACDOC_01873 2e-180 yvdE K helix_turn _helix lactose operon repressor
PAFACDOC_01874 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PAFACDOC_01875 2.9e-148 yxeH S hydrolase
PAFACDOC_01876 9e-264 ywfO S HD domain protein
PAFACDOC_01877 4.7e-157 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
PAFACDOC_01878 3.8e-78 ywiB S Domain of unknown function (DUF1934)
PAFACDOC_01879 4e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PAFACDOC_01880 3.4e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAFACDOC_01881 4.7e-246 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAFACDOC_01882 3.1e-229 tdcC E amino acid
PAFACDOC_01883 9.8e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PAFACDOC_01884 7.6e-158 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PAFACDOC_01885 6.4e-131 S YheO-like PAS domain
PAFACDOC_01886 2.5e-26
PAFACDOC_01887 3.6e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAFACDOC_01888 6.6e-240 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAFACDOC_01889 7.8e-41 rpmE2 J Ribosomal protein L31
PAFACDOC_01890 3.2e-214 J translation release factor activity
PAFACDOC_01891 9.2e-127 srtA 3.4.22.70 M sortase family
PAFACDOC_01892 1.7e-91 lemA S LemA family
PAFACDOC_01893 4.6e-139 htpX O Belongs to the peptidase M48B family
PAFACDOC_01894 2e-146
PAFACDOC_01895 3.6e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAFACDOC_01896 6.6e-258 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PAFACDOC_01897 1e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAFACDOC_01898 9.3e-214 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAFACDOC_01899 1.6e-64 ndoA L Toxic component of a toxin-antitoxin (TA) module
PAFACDOC_01900 0.0 kup P Transport of potassium into the cell
PAFACDOC_01901 2.9e-193 P ABC transporter, substratebinding protein
PAFACDOC_01902 2.2e-129 ssuC2 U Binding-protein-dependent transport system inner membrane component
PAFACDOC_01903 1.9e-133 P ATPases associated with a variety of cellular activities
PAFACDOC_01904 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PAFACDOC_01905 8.3e-204 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAFACDOC_01906 7.2e-189 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PAFACDOC_01907 1.3e-229 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PAFACDOC_01908 9.4e-130 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
PAFACDOC_01909 5.1e-215 argD 2.6.1.11, 2.6.1.17 E acetylornithine
PAFACDOC_01910 3.6e-188 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PAFACDOC_01911 4.1e-84 S QueT transporter
PAFACDOC_01912 6.2e-114 S (CBS) domain
PAFACDOC_01913 4.2e-264 S Putative peptidoglycan binding domain
PAFACDOC_01914 3.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PAFACDOC_01915 1.5e-100 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAFACDOC_01916 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAFACDOC_01917 4.3e-289 yabM S Polysaccharide biosynthesis protein
PAFACDOC_01918 2.2e-42 yabO J S4 domain protein
PAFACDOC_01920 1.1e-63 divIC D Septum formation initiator
PAFACDOC_01921 3.1e-74 yabR J RNA binding
PAFACDOC_01922 6.4e-254 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAFACDOC_01923 1.7e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PAFACDOC_01924 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAFACDOC_01925 1.2e-163 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PAFACDOC_01926 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAFACDOC_01927 3e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PAFACDOC_01928 1.8e-84 hmpT S Pfam:DUF3816
PAFACDOC_01929 1.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAFACDOC_01930 3.9e-111
PAFACDOC_01931 2.4e-149 M Glycosyl hydrolases family 25
PAFACDOC_01932 2e-143 yvpB S Peptidase_C39 like family
PAFACDOC_01933 1.1e-92 yueI S Protein of unknown function (DUF1694)
PAFACDOC_01934 1.6e-115 S Protein of unknown function (DUF554)
PAFACDOC_01935 6.4e-148 KT helix_turn_helix, mercury resistance
PAFACDOC_01936 1.7e-227 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAFACDOC_01937 6.6e-95 S Protein of unknown function (DUF1440)
PAFACDOC_01938 5.2e-174 hrtB V ABC transporter permease
PAFACDOC_01939 2.8e-120 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PAFACDOC_01940 3.7e-91 2.7.7.65 T phosphorelay sensor kinase activity
PAFACDOC_01941 4.2e-186 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PAFACDOC_01942 8.1e-99 1.5.1.3 H RibD C-terminal domain
PAFACDOC_01943 1.1e-185 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAFACDOC_01944 6.4e-117 S Membrane
PAFACDOC_01945 1.2e-155 mleP3 S Membrane transport protein
PAFACDOC_01946 8.5e-257 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
PAFACDOC_01947 1.3e-189 ynfM EGP Major facilitator Superfamily
PAFACDOC_01948 2.8e-125 hadL 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAFACDOC_01949 4.1e-270 lmrB EGP Major facilitator Superfamily
PAFACDOC_01950 2e-75 S Domain of unknown function (DUF4811)
PAFACDOC_01951 1.8e-101 rimL J Acetyltransferase (GNAT) domain
PAFACDOC_01952 9.3e-173 S Conserved hypothetical protein 698
PAFACDOC_01953 4.8e-151 rlrG K Transcriptional regulator
PAFACDOC_01954 7.6e-296 tagE5 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
PAFACDOC_01955 6.9e-268 tagE6 2.4.1.52 GT4 M Glycosyl transferases group 1
PAFACDOC_01957 1.8e-46 lytE M LysM domain
PAFACDOC_01958 1.2e-91 ogt 2.1.1.63 L Methyltransferase
PAFACDOC_01959 7.5e-166 natA S ABC transporter, ATP-binding protein
PAFACDOC_01960 1.4e-210 natB CP ABC-2 family transporter protein
PAFACDOC_01961 1.4e-128 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PAFACDOC_01962 7.3e-55 yphJ 4.1.1.44 S Carboxymuconolactone decarboxylase family
PAFACDOC_01963 3.2e-76 yphH S Cupin domain
PAFACDOC_01964 2.9e-78 K transcriptional regulator, MerR family
PAFACDOC_01965 1.4e-234 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PAFACDOC_01966 0.0 ylbB V ABC transporter permease
PAFACDOC_01967 7.5e-121 macB V ABC transporter, ATP-binding protein
PAFACDOC_01969 2.3e-116 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAFACDOC_01970 2.2e-100 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PAFACDOC_01971 8.4e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PAFACDOC_01973 3.8e-84
PAFACDOC_01974 2.8e-85 yvbK 3.1.3.25 K GNAT family
PAFACDOC_01975 3.2e-37
PAFACDOC_01976 8.2e-48
PAFACDOC_01977 1.4e-110 pgm8 G Histidine phosphatase superfamily (branch 1)
PAFACDOC_01978 3.8e-63 S Domain of unknown function (DUF4440)
PAFACDOC_01979 6.9e-156 K LysR substrate binding domain
PAFACDOC_01980 1.9e-104 GM NAD(P)H-binding
PAFACDOC_01981 1.5e-194 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PAFACDOC_01982 1.4e-150 IQ Enoyl-(Acyl carrier protein) reductase
PAFACDOC_01983 1.3e-34
PAFACDOC_01984 6.1e-76 T Belongs to the universal stress protein A family
PAFACDOC_01985 1.3e-94 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
PAFACDOC_01986 4.4e-126 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAFACDOC_01987 2.1e-31
PAFACDOC_01988 1.1e-306 U Belongs to the BCCT transporter (TC 2.A.15) family
PAFACDOC_01989 0.0 cadA P P-type ATPase
PAFACDOC_01991 1.8e-124 yyaQ S YjbR
PAFACDOC_01992 2.9e-29 S Uncharacterized protein conserved in bacteria (DUF2325)
PAFACDOC_01993 2.8e-168 S Uncharacterized protein conserved in bacteria (DUF2325)
PAFACDOC_01994 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PAFACDOC_01995 2.2e-199 frlB M SIS domain
PAFACDOC_01996 3e-26 3.2.2.10 S Belongs to the LOG family
PAFACDOC_01997 3.4e-253 nhaC C Na H antiporter NhaC
PAFACDOC_01998 1.3e-249 cycA E Amino acid permease
PAFACDOC_01999 5.7e-73 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_02000 2.7e-71 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_02001 1.6e-85 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
PAFACDOC_02002 7.7e-160 azoB GM NmrA-like family
PAFACDOC_02003 5.4e-66 K Winged helix DNA-binding domain
PAFACDOC_02004 7e-71 spx4 1.20.4.1 P ArsC family
PAFACDOC_02005 1.7e-66 yeaO S Protein of unknown function, DUF488
PAFACDOC_02006 4e-53
PAFACDOC_02007 4.1e-214 mutY L A G-specific adenine glycosylase
PAFACDOC_02008 1.9e-62
PAFACDOC_02009 4.3e-86
PAFACDOC_02010 2e-79 hsp3 O Belongs to the small heat shock protein (HSP20) family
PAFACDOC_02011 5.9e-55
PAFACDOC_02012 2.1e-14
PAFACDOC_02013 1.1e-115 GM NmrA-like family
PAFACDOC_02014 1.3e-81 elaA S GNAT family
PAFACDOC_02015 5.9e-158 EG EamA-like transporter family
PAFACDOC_02016 1.8e-119 S membrane
PAFACDOC_02017 6.8e-111 S VIT family
PAFACDOC_02018 1.3e-190 pva2 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PAFACDOC_02019 0.0 copB 3.6.3.4 P P-type ATPase
PAFACDOC_02020 4.7e-73 copR K Copper transport repressor CopY TcrY
PAFACDOC_02021 7.4e-40
PAFACDOC_02022 7.7e-73 S COG NOG18757 non supervised orthologous group
PAFACDOC_02023 1.5e-248 lmrB EGP Major facilitator Superfamily
PAFACDOC_02024 3.4e-25
PAFACDOC_02025 4.2e-49
PAFACDOC_02026 1.6e-64 ycgX S Protein of unknown function (DUF1398)
PAFACDOC_02027 5.2e-251 U Belongs to the purine-cytosine permease (2.A.39) family
PAFACDOC_02028 5.9e-214 mdtG EGP Major facilitator Superfamily
PAFACDOC_02029 2.6e-180 D Alpha beta
PAFACDOC_02030 3.1e-78 M1-874 K Domain of unknown function (DUF1836)
PAFACDOC_02031 5.9e-85 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PAFACDOC_02032 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
PAFACDOC_02033 6.4e-311 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PAFACDOC_02034 8.4e-152 ywkB S Membrane transport protein
PAFACDOC_02035 5.2e-164 yvgN C Aldo keto reductase
PAFACDOC_02036 9.2e-133 thrE S Putative threonine/serine exporter
PAFACDOC_02037 7.5e-77 S Threonine/Serine exporter, ThrE
PAFACDOC_02038 2.3e-43 S Protein of unknown function (DUF1093)
PAFACDOC_02039 1.1e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PAFACDOC_02040 2.7e-91 ymdB S Macro domain protein
PAFACDOC_02041 1.2e-95 K transcriptional regulator
PAFACDOC_02042 5.5e-50 yvlA
PAFACDOC_02043 6e-161 ypuA S Protein of unknown function (DUF1002)
PAFACDOC_02044 0.0
PAFACDOC_02045 1.7e-121 S Bacterial protein of unknown function (DUF916)
PAFACDOC_02046 8.2e-207 ica2 GT2 M Glycosyl transferase family group 2
PAFACDOC_02047 1.2e-286
PAFACDOC_02048 8.2e-205 ftsW D Belongs to the SEDS family
PAFACDOC_02049 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PAFACDOC_02050 1.5e-49 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PAFACDOC_02051 2.2e-102 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PAFACDOC_02052 1.5e-83 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAFACDOC_02053 9.6e-197 ylbL T Belongs to the peptidase S16 family
PAFACDOC_02054 6.8e-125 comEA L Competence protein ComEA
PAFACDOC_02055 6.4e-79 comEB 3.5.4.12 F ComE operon protein 2
PAFACDOC_02056 0.0 comEC S Competence protein ComEC
PAFACDOC_02057 7e-187 holA 2.7.7.7 L DNA polymerase III delta subunit
PAFACDOC_02058 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
PAFACDOC_02059 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAFACDOC_02060 7.2e-103 mdtG EGP Major Facilitator Superfamily
PAFACDOC_02061 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAFACDOC_02062 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAFACDOC_02063 1e-157 S Tetratricopeptide repeat
PAFACDOC_02064 6.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAFACDOC_02065 1.4e-213 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAFACDOC_02066 3.3e-236 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAFACDOC_02067 5.1e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
PAFACDOC_02068 2.2e-49 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PAFACDOC_02069 9.9e-73 S Iron-sulphur cluster biosynthesis
PAFACDOC_02070 4.3e-22
PAFACDOC_02071 9.2e-270 glnPH2 P ABC transporter permease
PAFACDOC_02072 1.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAFACDOC_02073 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAFACDOC_02074 2.9e-126 epsB M biosynthesis protein
PAFACDOC_02075 2.8e-123 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PAFACDOC_02076 3.5e-146 ywqE 3.1.3.48 GM PHP domain protein
PAFACDOC_02077 9.6e-180 cps4D 5.1.3.2 M RmlD substrate binding domain
PAFACDOC_02078 7.4e-126 tuaA M Bacterial sugar transferase
PAFACDOC_02079 5.6e-175 cps4F 2.4.1.21, 2.4.1.306 GT4,GT5 M Glycosyl transferases group 1
PAFACDOC_02080 2.7e-103 cps4G M Glycosyltransferase Family 4
PAFACDOC_02081 6.5e-38 cps4G M Glycosyltransferase Family 4
PAFACDOC_02082 1.3e-232
PAFACDOC_02083 3e-176 cps4I M Glycosyltransferase like family 2
PAFACDOC_02084 4.5e-261 cps4J S Polysaccharide biosynthesis protein
PAFACDOC_02085 3.8e-251 cpdA S Calcineurin-like phosphoesterase
PAFACDOC_02086 6.7e-292 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
PAFACDOC_02087 2.3e-170 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PAFACDOC_02088 1.5e-135 fruR K DeoR C terminal sensor domain
PAFACDOC_02089 2.4e-245 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAFACDOC_02090 3.2e-46
PAFACDOC_02091 8.1e-179 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAFACDOC_02092 5.6e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PAFACDOC_02093 2e-50 yrvD S Lipopolysaccharide assembly protein A domain
PAFACDOC_02094 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PAFACDOC_02095 2.9e-93 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAFACDOC_02096 1.5e-98 K Helix-turn-helix domain
PAFACDOC_02097 6.1e-211 EGP Major facilitator Superfamily
PAFACDOC_02098 8.5e-57 ybjQ S Belongs to the UPF0145 family
PAFACDOC_02099 1.1e-138 Q Methyltransferase
PAFACDOC_02100 3.6e-31
PAFACDOC_02101 1.6e-174 corA P CorA-like Mg2+ transporter protein
PAFACDOC_02102 1.9e-62 S Protein of unknown function (DUF3397)
PAFACDOC_02103 1.9e-77 mraZ K Belongs to the MraZ family
PAFACDOC_02104 5.5e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAFACDOC_02105 7.5e-54 ftsL D Cell division protein FtsL
PAFACDOC_02106 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PAFACDOC_02107 8.3e-179 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAFACDOC_02108 1.2e-260 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAFACDOC_02109 3.4e-197 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAFACDOC_02110 5.8e-163 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PAFACDOC_02111 5.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAFACDOC_02112 1.4e-229 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAFACDOC_02113 3.3e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAFACDOC_02114 1.2e-36 yggT S YGGT family
PAFACDOC_02115 3.4e-146 ylmH S S4 domain protein
PAFACDOC_02116 1.2e-86 divIVA D DivIVA domain protein
PAFACDOC_02117 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAFACDOC_02118 1.1e-189 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAFACDOC_02119 1.9e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PAFACDOC_02120 4.6e-28
PAFACDOC_02121 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAFACDOC_02122 2.6e-214 iscS 2.8.1.7 E Aminotransferase class V
PAFACDOC_02123 4.9e-57 XK27_04120 S Putative amino acid metabolism
PAFACDOC_02124 9e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAFACDOC_02125 1.3e-241 ktrB P Potassium uptake protein
PAFACDOC_02126 2.6e-115 ktrA P domain protein
PAFACDOC_02127 2.3e-120 N WxL domain surface cell wall-binding
PAFACDOC_02128 1.9e-192 S Bacterial protein of unknown function (DUF916)
PAFACDOC_02129 1.6e-266 N domain, Protein
PAFACDOC_02130 5.5e-121 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
PAFACDOC_02131 1.6e-120 S Repeat protein
PAFACDOC_02132 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PAFACDOC_02133 4.4e-172 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAFACDOC_02134 2.6e-107 mltD CBM50 M NlpC P60 family protein
PAFACDOC_02135 1.7e-28
PAFACDOC_02136 2.2e-187 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PAFACDOC_02137 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAFACDOC_02138 3.1e-33 ykzG S Belongs to the UPF0356 family
PAFACDOC_02139 1.6e-85
PAFACDOC_02140 3.1e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAFACDOC_02141 1.6e-210 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PAFACDOC_02142 8.4e-179 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PAFACDOC_02143 1.8e-208 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PAFACDOC_02144 1.2e-266 lpdA 1.8.1.4 C Dehydrogenase
PAFACDOC_02145 4.7e-163 1.1.1.27 C L-malate dehydrogenase activity
PAFACDOC_02146 3.3e-46 yktA S Belongs to the UPF0223 family
PAFACDOC_02147 3.1e-136 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PAFACDOC_02148 0.0 typA T GTP-binding protein TypA
PAFACDOC_02149 1.1e-172
PAFACDOC_02150 1.2e-103
PAFACDOC_02151 3.9e-11 ica2 GT2 M Glycosyl transferase family group 2
PAFACDOC_02152 7e-40
PAFACDOC_02154 1.3e-249 EGP Major facilitator Superfamily
PAFACDOC_02155 2e-169 znuA P Belongs to the bacterial solute-binding protein 9 family
PAFACDOC_02156 4.7e-83 cvpA S Colicin V production protein
PAFACDOC_02157 2.2e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PAFACDOC_02158 2.8e-93 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PAFACDOC_02159 2.6e-103 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
PAFACDOC_02160 1.8e-248 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PAFACDOC_02161 7.7e-103 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
PAFACDOC_02162 2.3e-212 folP 2.5.1.15 H dihydropteroate synthase
PAFACDOC_02163 6.5e-96 tag 3.2.2.20 L glycosylase
PAFACDOC_02164 2.6e-19
PAFACDOC_02165 2.7e-160 czcD P cation diffusion facilitator family transporter
PAFACDOC_02166 5.1e-54 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PAFACDOC_02167 3e-116 hly S protein, hemolysin III
PAFACDOC_02168 1.1e-44 qacH U Small Multidrug Resistance protein
PAFACDOC_02169 5.8e-59 qacC P Small Multidrug Resistance protein
PAFACDOC_02170 1.3e-215 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
PAFACDOC_02171 5.3e-179 K AI-2E family transporter
PAFACDOC_02172 4.6e-166 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAFACDOC_02173 0.0 kup P Transport of potassium into the cell
PAFACDOC_02175 2.3e-257 yhdG E C-terminus of AA_permease
PAFACDOC_02176 2.1e-82
PAFACDOC_02178 4e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAFACDOC_02179 1.7e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
PAFACDOC_02180 1.3e-184 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAFACDOC_02181 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAFACDOC_02182 9.6e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PAFACDOC_02183 9.8e-55 S Enterocin A Immunity
PAFACDOC_02184 1.9e-258 gor 1.8.1.7 C Glutathione reductase
PAFACDOC_02185 2.9e-199 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PAFACDOC_02186 4.2e-183 D Alpha beta
PAFACDOC_02187 6.9e-164 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I Squalene/phytoene synthase
PAFACDOC_02188 1.1e-294 crtI 1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31 Q Flavin containing amine oxidoreductase
PAFACDOC_02189 5e-117 yugP S Putative neutral zinc metallopeptidase
PAFACDOC_02190 4.1e-25
PAFACDOC_02191 7.1e-145 DegV S EDD domain protein, DegV family
PAFACDOC_02192 7.3e-127 lrgB M LrgB-like family
PAFACDOC_02193 5.1e-64 lrgA S LrgA family
PAFACDOC_02194 3.8e-104 J Acetyltransferase (GNAT) domain
PAFACDOC_02195 2.1e-78 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 S Calcineurin-like phosphoesterase
PAFACDOC_02196 2.1e-60 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 S Calcineurin-like phosphoesterase
PAFACDOC_02197 5.4e-36 S Phospholipase_D-nuclease N-terminal
PAFACDOC_02198 7.1e-59 S Enterocin A Immunity
PAFACDOC_02199 1.3e-87 perR P Belongs to the Fur family
PAFACDOC_02200 8.4e-105
PAFACDOC_02201 7.9e-238 S module of peptide synthetase
PAFACDOC_02202 1.1e-77 S NADPH-dependent FMN reductase
PAFACDOC_02203 1.4e-08
PAFACDOC_02204 3.9e-127 magIII L Base excision DNA repair protein, HhH-GPD family
PAFACDOC_02205 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
PAFACDOC_02206 9e-156 1.6.5.2 GM NmrA-like family
PAFACDOC_02207 2e-77 merR K MerR family regulatory protein
PAFACDOC_02208 2.1e-244 dinF V MatE
PAFACDOC_02209 1.9e-31
PAFACDOC_02212 1.5e-77 elaA S Acetyltransferase (GNAT) domain
PAFACDOC_02213 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PAFACDOC_02214 1.4e-81
PAFACDOC_02215 0.0 yhcA V MacB-like periplasmic core domain
PAFACDOC_02216 1.1e-105
PAFACDOC_02217 0.0 K PRD domain
PAFACDOC_02218 2.4e-62 S Domain of unknown function (DUF3284)
PAFACDOC_02219 1.4e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PAFACDOC_02220 1.1e-47 pts15B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PAFACDOC_02221 8.4e-214 pts15C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_02222 5.2e-289 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAFACDOC_02223 9.5e-209 EGP Major facilitator Superfamily
PAFACDOC_02224 1.5e-112 M ErfK YbiS YcfS YnhG
PAFACDOC_02225 4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAFACDOC_02226 2.4e-283 ydfD K Alanine-glyoxylate amino-transferase
PAFACDOC_02227 1.4e-102 argO S LysE type translocator
PAFACDOC_02228 7.1e-214 arcT 2.6.1.1 E Aminotransferase
PAFACDOC_02229 4.4e-77 argR K Regulates arginine biosynthesis genes
PAFACDOC_02230 2.9e-12
PAFACDOC_02231 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PAFACDOC_02232 1e-54 yheA S Belongs to the UPF0342 family
PAFACDOC_02233 5.7e-233 yhaO L Ser Thr phosphatase family protein
PAFACDOC_02234 0.0 L AAA domain
PAFACDOC_02235 2.9e-187 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAFACDOC_02236 2.1e-213
PAFACDOC_02237 3.1e-181 3.4.21.102 M Peptidase family S41
PAFACDOC_02238 7.6e-177 K LysR substrate binding domain
PAFACDOC_02239 2.1e-111 1.3.5.4 S NADPH-dependent FMN reductase
PAFACDOC_02240 0.0 1.3.5.4 C FAD binding domain
PAFACDOC_02241 1.7e-99
PAFACDOC_02242 3.5e-76 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PAFACDOC_02243 6.1e-185 ykoT GT2 M Glycosyl transferase family 2
PAFACDOC_02244 1.7e-15 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAFACDOC_02245 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAFACDOC_02246 1.7e-19 S NUDIX domain
PAFACDOC_02247 0.0 S membrane
PAFACDOC_02248 3.7e-172 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PAFACDOC_02249 6.3e-75 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PAFACDOC_02250 9e-223 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PAFACDOC_02251 1.4e-81 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PAFACDOC_02252 9.3e-106 GBS0088 S Nucleotidyltransferase
PAFACDOC_02253 5.5e-106
PAFACDOC_02254 7.9e-117 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PAFACDOC_02255 4.7e-74 K Bacterial regulatory proteins, tetR family
PAFACDOC_02256 3.9e-102 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PAFACDOC_02257 4.8e-221 patB 4.4.1.8 E Aminotransferase, class I
PAFACDOC_02258 7.4e-102 M Protein of unknown function (DUF3737)
PAFACDOC_02259 1.2e-194 C Aldo/keto reductase family
PAFACDOC_02261 0.0 mdlB V ABC transporter
PAFACDOC_02262 0.0 mdlA V ABC transporter
PAFACDOC_02263 1.3e-246 EGP Major facilitator Superfamily
PAFACDOC_02268 1e-197 yhgE V domain protein
PAFACDOC_02269 1.5e-95 K Transcriptional regulator (TetR family)
PAFACDOC_02270 1.4e-53 K helix_turn_helix, Arsenical Resistance Operon Repressor
PAFACDOC_02271 1.7e-139 endA F DNA RNA non-specific endonuclease
PAFACDOC_02272 6.3e-99 speG J Acetyltransferase (GNAT) domain
PAFACDOC_02273 2.2e-96 2.3.1.128 J Acetyltransferase (GNAT) domain
PAFACDOC_02274 1.1e-223 S CAAX protease self-immunity
PAFACDOC_02275 1.2e-307 ybiT S ABC transporter, ATP-binding protein
PAFACDOC_02276 2.8e-148 3.1.3.102, 3.1.3.104 S hydrolase
PAFACDOC_02277 0.0 S Predicted membrane protein (DUF2207)
PAFACDOC_02278 0.0 uvrA3 L excinuclease ABC
PAFACDOC_02279 3.1e-207 EGP Major facilitator Superfamily
PAFACDOC_02280 1.2e-171 ropB K Helix-turn-helix XRE-family like proteins
PAFACDOC_02281 2e-233 yxiO S Vacuole effluxer Atg22 like
PAFACDOC_02282 1.6e-254 npp S type I phosphodiesterase nucleotide pyrophosphatase
PAFACDOC_02283 1.1e-158 I alpha/beta hydrolase fold
PAFACDOC_02284 7e-130 treR K UTRA
PAFACDOC_02285 1.2e-234
PAFACDOC_02286 5.6e-39 S Cytochrome B5
PAFACDOC_02287 7.5e-89 pts21A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAFACDOC_02288 1.6e-106 2.7.7.65 T Diguanylate cyclase, GGDEF domain
PAFACDOC_02289 7.4e-64
PAFACDOC_02290 1.3e-159 T Calcineurin-like phosphoesterase superfamily domain
PAFACDOC_02291 3.2e-55
PAFACDOC_02292 5.3e-150 dicA K Helix-turn-helix domain
PAFACDOC_02293 6.8e-75 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAFACDOC_02294 7e-53 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PAFACDOC_02295 3.5e-269 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_02296 9.2e-280 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAFACDOC_02297 5.3e-184 1.1.1.219 GM Male sterility protein
PAFACDOC_02298 5.1e-75 K helix_turn_helix, mercury resistance
PAFACDOC_02299 2.3e-65 M LysM domain
PAFACDOC_02300 6.7e-87 M Lysin motif
PAFACDOC_02301 1.8e-107 S SdpI/YhfL protein family
PAFACDOC_02302 1.8e-54 nudA S ASCH
PAFACDOC_02303 9.1e-164 psaA P Belongs to the bacterial solute-binding protein 9 family
PAFACDOC_02304 4.2e-92
PAFACDOC_02305 2e-120 tag 3.2.2.20 L Methyladenine glycosylase
PAFACDOC_02306 3.3e-219 T diguanylate cyclase
PAFACDOC_02307 1.2e-73 S Psort location Cytoplasmic, score
PAFACDOC_02308 2.1e-285 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
PAFACDOC_02309 8.6e-218 ykiI
PAFACDOC_02310 0.0 V ABC transporter
PAFACDOC_02311 6.2e-310 XK27_09600 V ABC transporter, ATP-binding protein
PAFACDOC_02313 7.1e-228 amd 3.5.1.47 E Peptidase family M20/M25/M40
PAFACDOC_02314 7.7e-163 IQ KR domain
PAFACDOC_02316 7.4e-71
PAFACDOC_02317 4.3e-144 K Helix-turn-helix XRE-family like proteins
PAFACDOC_02318 9.6e-267 yjeM E Amino Acid
PAFACDOC_02319 1.1e-65 lysM M LysM domain
PAFACDOC_02320 1.3e-223 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
PAFACDOC_02321 5.4e-214 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
PAFACDOC_02322 0.0 ctpA 3.6.3.54 P P-type ATPase
PAFACDOC_02323 3.2e-43 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PAFACDOC_02324 2.4e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PAFACDOC_02325 2.2e-129 S CAAX protease self-immunity
PAFACDOC_02326 2.4e-22 plnF
PAFACDOC_02327 5.5e-13
PAFACDOC_02328 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PAFACDOC_02329 7.5e-242 mesE M Transport protein ComB
PAFACDOC_02330 1.4e-108 S CAAX protease self-immunity
PAFACDOC_02331 7.4e-118 ypbD S CAAX protease self-immunity
PAFACDOC_02332 1.2e-110 V CAAX protease self-immunity
PAFACDOC_02333 9.6e-113 S CAAX protease self-immunity
PAFACDOC_02334 1.8e-47 higA K Helix-turn-helix XRE-family like proteins
PAFACDOC_02335 0.0 helD 3.6.4.12 L DNA helicase
PAFACDOC_02336 2.1e-140 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PAFACDOC_02337 5.9e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAFACDOC_02338 9e-130 K UbiC transcription regulator-associated domain protein
PAFACDOC_02339 1.9e-253 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_02340 3.9e-24
PAFACDOC_02341 4.9e-75 S Domain of unknown function (DUF3284)
PAFACDOC_02342 4.8e-34
PAFACDOC_02343 2.8e-58 chpA T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAFACDOC_02344 8.9e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAFACDOC_02345 8.2e-168 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PAFACDOC_02346 4e-229 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PAFACDOC_02347 2.7e-177
PAFACDOC_02348 2.5e-132 cobB K SIR2 family
PAFACDOC_02349 2e-160 yunF F Protein of unknown function DUF72
PAFACDOC_02350 5.2e-71 mutT 3.6.1.55 F DNA mismatch repair protein MutT
PAFACDOC_02351 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAFACDOC_02352 2e-214 bcr1 EGP Major facilitator Superfamily
PAFACDOC_02353 1.3e-83 mutR K sequence-specific DNA binding
PAFACDOC_02355 1.5e-146 tatD L hydrolase, TatD family
PAFACDOC_02356 4.7e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PAFACDOC_02357 1.5e-158 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAFACDOC_02358 3.2e-37 veg S Biofilm formation stimulator VEG
PAFACDOC_02359 1.5e-163 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PAFACDOC_02360 1.3e-181 S Prolyl oligopeptidase family
PAFACDOC_02361 9.8e-129 fhuC 3.6.3.35 P ABC transporter
PAFACDOC_02362 9.2e-131 znuB U ABC 3 transport family
PAFACDOC_02363 2.6e-212 S ATPases associated with a variety of cellular activities
PAFACDOC_02364 8.5e-50 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAFACDOC_02365 3.5e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAFACDOC_02367 4.5e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAFACDOC_02368 2.9e-162 FbpA K Domain of unknown function (DUF814)
PAFACDOC_02369 1.3e-60 S Domain of unknown function (DU1801)
PAFACDOC_02370 4.9e-34
PAFACDOC_02371 7.2e-178 yghZ C Aldo keto reductase family protein
PAFACDOC_02372 3e-113 pgm1 G phosphoglycerate mutase
PAFACDOC_02373 7e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PAFACDOC_02374 2.3e-215 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAFACDOC_02375 5.9e-79 yiaC K Acetyltransferase (GNAT) domain
PAFACDOC_02376 1.8e-309 oppA E ABC transporter, substratebinding protein
PAFACDOC_02377 0.0 oppA E ABC transporter, substratebinding protein
PAFACDOC_02378 2.1e-157 hipB K Helix-turn-helix
PAFACDOC_02380 0.0 3.6.4.13 M domain protein
PAFACDOC_02381 5e-27 mleR K LysR substrate binding domain
PAFACDOC_02382 2.9e-128 mleR K LysR substrate binding domain
PAFACDOC_02383 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PAFACDOC_02384 1.1e-217 nhaC C Na H antiporter NhaC
PAFACDOC_02385 1.4e-164 3.5.1.10 C nadph quinone reductase
PAFACDOC_02386 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PAFACDOC_02387 5.9e-172 scrR K Transcriptional regulator, LacI family
PAFACDOC_02388 1.5e-304 scrB 3.2.1.26 GH32 G invertase
PAFACDOC_02389 0.0 scrA 2.7.1.193, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PAFACDOC_02390 0.0 rafA 3.2.1.22 G alpha-galactosidase
PAFACDOC_02391 4.1e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PAFACDOC_02392 2e-45 ygbF S Sugar efflux transporter for intercellular exchange
PAFACDOC_02393 2.9e-253 S Bacterial membrane protein YfhO
PAFACDOC_02394 1.6e-146 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_02395 2.1e-168 K LysR substrate binding domain
PAFACDOC_02396 1.9e-236 EK Aminotransferase, class I
PAFACDOC_02397 2.3e-126 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PAFACDOC_02398 8.1e-123 tcyB E ABC transporter
PAFACDOC_02399 3.6e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAFACDOC_02400 3.3e-120 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PAFACDOC_02401 5.8e-79 KT response to antibiotic
PAFACDOC_02402 9.8e-52 K Transcriptional regulator
PAFACDOC_02403 7.7e-72 XK27_06920 S Protein of unknown function (DUF1700)
PAFACDOC_02404 2.1e-126 S Putative adhesin
PAFACDOC_02405 0.0 scrA 2.7.1.193, 2.7.1.211 G phosphotransferase system
PAFACDOC_02406 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PAFACDOC_02407 4.1e-181 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PAFACDOC_02408 2.6e-205 S DUF218 domain
PAFACDOC_02409 6.8e-128 ybbM S Uncharacterised protein family (UPF0014)
PAFACDOC_02410 1.4e-116 ybbL S ABC transporter, ATP-binding protein
PAFACDOC_02411 4.2e-275 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAFACDOC_02412 9.4e-77
PAFACDOC_02413 2.2e-151 qorB 1.6.5.2 GM NmrA-like family
PAFACDOC_02414 1.1e-147 cof S haloacid dehalogenase-like hydrolase
PAFACDOC_02415 3.7e-93 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PAFACDOC_02416 4e-308 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PAFACDOC_02417 3.7e-122 mngA 2.7.1.195, 2.7.1.202 U Phosphotransferase system, EIIC
PAFACDOC_02418 2.4e-26 mngA 2.7.1.195, 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PAFACDOC_02419 1.7e-20 fryA 2.7.1.202 G COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PAFACDOC_02420 2.9e-90 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAFACDOC_02421 1.1e-159 yicL EG EamA-like transporter family
PAFACDOC_02422 1.3e-128 E lipolytic protein G-D-S-L family
PAFACDOC_02423 1.7e-176 4.1.1.52 S Amidohydrolase
PAFACDOC_02424 2.5e-112 K Transcriptional regulator C-terminal region
PAFACDOC_02425 6.9e-47 3.6.4.12 K HxlR-like helix-turn-helix
PAFACDOC_02426 4.2e-161 ypbG 2.7.1.2 GK ROK family
PAFACDOC_02427 0.0 ybfG M peptidoglycan-binding domain-containing protein
PAFACDOC_02428 5.6e-89
PAFACDOC_02429 7.6e-132 lmrA 3.6.3.44 V ABC transporter
PAFACDOC_02430 2.4e-187 lmrA 3.6.3.44 V ABC transporter
PAFACDOC_02431 5e-93 rmaB K Transcriptional regulator, MarR family
PAFACDOC_02432 7.1e-159 ccpB 5.1.1.1 K lacI family
PAFACDOC_02433 3e-121 yceE S haloacid dehalogenase-like hydrolase
PAFACDOC_02434 1.3e-119 drgA C Nitroreductase family
PAFACDOC_02435 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
PAFACDOC_02436 2.9e-117 cmpC S ATPases associated with a variety of cellular activities
PAFACDOC_02437 5.6e-154 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
PAFACDOC_02438 1.5e-167 XK27_00670 S ABC transporter
PAFACDOC_02439 1e-260
PAFACDOC_02440 7.3e-62
PAFACDOC_02441 2.5e-189 S Cell surface protein
PAFACDOC_02442 2.3e-91 S WxL domain surface cell wall-binding
PAFACDOC_02443 5.3e-63 acuB S Domain in cystathionine beta-synthase and other proteins.
PAFACDOC_02444 1.8e-31 cp12 S Domain in cystathionine beta-synthase and other proteins.
PAFACDOC_02445 3.3e-124 livF E ABC transporter
PAFACDOC_02446 5.2e-139 livG E Branched-chain amino acid ATP-binding cassette transporter
PAFACDOC_02447 5.3e-141 livM E Branched-chain amino acid transport system / permease component
PAFACDOC_02448 2.1e-149 livH U Branched-chain amino acid transport system / permease component
PAFACDOC_02449 5.4e-212 livJ E Receptor family ligand binding region
PAFACDOC_02451 7e-33
PAFACDOC_02452 1.4e-98 L Integrase core domain
PAFACDOC_02453 9.1e-50
PAFACDOC_02454 3e-08
PAFACDOC_02456 5.2e-188 rbsR K helix_turn _helix lactose operon repressor
PAFACDOC_02457 6.7e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAFACDOC_02458 3e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PAFACDOC_02459 2.7e-160 rbsU U ribose uptake protein RbsU
PAFACDOC_02460 3.8e-145 IQ NAD dependent epimerase/dehydratase family
PAFACDOC_02461 0.0 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
PAFACDOC_02462 1.1e-86 gutM K Glucitol operon activator protein (GutM)
PAFACDOC_02463 2e-100 srlA G PTS system enzyme II sorbitol-specific factor
PAFACDOC_02464 1.5e-173 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PAFACDOC_02465 8.6e-63 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PAFACDOC_02466 0.0 spxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAFACDOC_02467 8.7e-72 K Transcriptional regulator
PAFACDOC_02468 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAFACDOC_02469 1.1e-130 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PAFACDOC_02470 5.1e-57 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PAFACDOC_02472 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
PAFACDOC_02473 2.4e-67 agrB KOT May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
PAFACDOC_02474 1.8e-12
PAFACDOC_02475 8.7e-160 2.7.13.3 T GHKL domain
PAFACDOC_02476 7.4e-135 K LytTr DNA-binding domain
PAFACDOC_02477 4.9e-78 yneH 1.20.4.1 K ArsC family
PAFACDOC_02478 5.4e-291 katA 1.11.1.6 C Belongs to the catalase family
PAFACDOC_02479 9e-13 ytgB S Transglycosylase associated protein
PAFACDOC_02480 3.6e-11
PAFACDOC_02481 1.6e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
PAFACDOC_02482 2.4e-114 K UTRA
PAFACDOC_02483 1.2e-269 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAFACDOC_02484 1.6e-247 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_02485 4.1e-65
PAFACDOC_02486 6.4e-63 S Protein of unknown function (DUF1093)
PAFACDOC_02487 4.3e-207 S Membrane
PAFACDOC_02488 1.1e-43 S Protein of unknown function (DUF3781)
PAFACDOC_02489 1e-107 ydeA S intracellular protease amidase
PAFACDOC_02490 2.2e-41 K HxlR-like helix-turn-helix
PAFACDOC_02491 3.3e-66
PAFACDOC_02492 1e-64 V ABC transporter
PAFACDOC_02493 2.3e-51 K Helix-turn-helix domain
PAFACDOC_02494 1.6e-202 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PAFACDOC_02495 1.4e-46 K Helix-turn-helix domain
PAFACDOC_02496 1.2e-90 S ABC-2 family transporter protein
PAFACDOC_02497 5.7e-58 S ABC-2 family transporter protein
PAFACDOC_02498 4.6e-91 V ABC transporter, ATP-binding protein
PAFACDOC_02499 8.8e-40
PAFACDOC_02500 7.9e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAFACDOC_02501 4.9e-172 K AI-2E family transporter
PAFACDOC_02502 1.7e-210 xylR GK ROK family
PAFACDOC_02503 2.3e-81
PAFACDOC_02504 4.7e-232 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PAFACDOC_02505 3.9e-162
PAFACDOC_02506 3.2e-200 KLT Protein tyrosine kinase
PAFACDOC_02507 2.9e-23 S Protein of unknown function (DUF4064)
PAFACDOC_02508 6e-97 S Domain of unknown function (DUF4352)
PAFACDOC_02509 3.9e-75 S Psort location Cytoplasmic, score
PAFACDOC_02510 1.3e-229 1.7.1.15 S Pyridine nucleotide-disulphide oxidoreductase
PAFACDOC_02511 1.8e-122 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PAFACDOC_02512 6.2e-165 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PAFACDOC_02513 5.4e-153 nanK GK ROK family
PAFACDOC_02514 1.6e-134 kguE 2.7.1.45 G Xylose isomerase domain protein TIM barrel
PAFACDOC_02515 5.2e-207 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAFACDOC_02516 1.7e-271 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAFACDOC_02517 1.3e-159 I alpha/beta hydrolase fold
PAFACDOC_02518 1.6e-99 I alpha/beta hydrolase fold
PAFACDOC_02519 2.6e-38 I alpha/beta hydrolase fold
PAFACDOC_02520 3.7e-72 yueI S Protein of unknown function (DUF1694)
PAFACDOC_02521 7.4e-136 K Helix-turn-helix domain, rpiR family
PAFACDOC_02522 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PAFACDOC_02523 7e-112 K DeoR C terminal sensor domain
PAFACDOC_02524 1.5e-80 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAFACDOC_02525 1.1e-44 2.7.1.194, 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PAFACDOC_02526 1.1e-231 gatC G PTS system sugar-specific permease component
PAFACDOC_02527 3e-188 gutB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PAFACDOC_02528 1.8e-113 gph 3.1.3.18 S Haloacid dehalogenase-like hydrolase
PAFACDOC_02529 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAFACDOC_02530 6.7e-78 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAFACDOC_02531 2.2e-45 ulaB 2.7.1.194, 2.7.1.200 G Phosphotransferase system galactitol-specific IIB component
PAFACDOC_02532 3.2e-240 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PAFACDOC_02533 8.3e-114 tal 2.2.1.2 F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PAFACDOC_02534 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PAFACDOC_02535 4.3e-144 yxeH S hydrolase
PAFACDOC_02536 3.4e-31 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAFACDOC_02537 4.4e-25 S Immunity protein 74
PAFACDOC_02538 5.1e-52 U domain, Protein
PAFACDOC_02539 1.1e-235 M domain protein
PAFACDOC_02540 4.7e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAFACDOC_02541 0.0 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PAFACDOC_02542 1.3e-300 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAFACDOC_02543 2.6e-255 gshR 1.8.1.7 C Glutathione reductase
PAFACDOC_02544 9.9e-180 proV E ABC transporter, ATP-binding protein
PAFACDOC_02545 1.5e-275 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAFACDOC_02546 3.8e-78 3.1.26.4 L RNA-DNA hybrid ribonuclease activity
PAFACDOC_02547 3.9e-162 vdlC S Belongs to the short-chain dehydrogenases reductases (SDR) family
PAFACDOC_02548 4.5e-174 rihC 3.2.2.1 F Nucleoside
PAFACDOC_02549 2.7e-68 accB 2.3.1.12 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PAFACDOC_02550 9.3e-80
PAFACDOC_02551 9.3e-83 ywnA K Winged helix-turn-helix transcription repressor, HrcA DNA-binding
PAFACDOC_02552 1.5e-230 flhF N Uncharacterized conserved protein (DUF2075)
PAFACDOC_02553 8.8e-95 yxkA S Phosphatidylethanolamine-binding protein
PAFACDOC_02554 1.1e-54 ypaA S Protein of unknown function (DUF1304)
PAFACDOC_02555 4.2e-310 mco Q Multicopper oxidase
PAFACDOC_02556 4.6e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PAFACDOC_02557 3.2e-20 zmp1 O Zinc-dependent metalloprotease
PAFACDOC_02558 3.7e-44
PAFACDOC_02559 4.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PAFACDOC_02560 2.9e-131 ydfG S KR domain
PAFACDOC_02561 8.3e-63 hxlR K HxlR-like helix-turn-helix
PAFACDOC_02562 1e-47 S Domain of unknown function (DUF1905)
PAFACDOC_02563 0.0 M Glycosyl hydrolases family 25
PAFACDOC_02564 9.1e-267 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PAFACDOC_02565 2e-166 GM NmrA-like family
PAFACDOC_02566 1.5e-95 fadR K Bacterial regulatory proteins, tetR family
PAFACDOC_02567 4.3e-204 2.7.13.3 T GHKL domain
PAFACDOC_02568 8.2e-134 K LytTr DNA-binding domain
PAFACDOC_02569 0.0 asnB 6.3.5.4 E Asparagine synthase
PAFACDOC_02570 1.4e-94 M ErfK YbiS YcfS YnhG
PAFACDOC_02571 5.1e-210 ytbD EGP Major facilitator Superfamily
PAFACDOC_02572 2e-61 K Transcriptional regulator, HxlR family
PAFACDOC_02573 1e-116 S Haloacid dehalogenase-like hydrolase
PAFACDOC_02574 5.9e-117
PAFACDOC_02575 6.9e-210 NU Mycoplasma protein of unknown function, DUF285
PAFACDOC_02576 1.1e-62
PAFACDOC_02577 2.2e-100 S WxL domain surface cell wall-binding
PAFACDOC_02578 2.4e-187 S Cell surface protein
PAFACDOC_02579 1.8e-113 S GyrI-like small molecule binding domain
PAFACDOC_02580 1.3e-66 S Iron-sulphur cluster biosynthesis
PAFACDOC_02581 2.3e-176 1.6.5.5 C Alcohol dehydrogenase GroES-like domain
PAFACDOC_02582 1.2e-102 2.7.7.65 T Diguanylate cyclase, GGDEF domain
PAFACDOC_02583 6.8e-127 yliE T EAL domain
PAFACDOC_02584 3.2e-103 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAFACDOC_02585 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PAFACDOC_02586 2e-80
PAFACDOC_02587 4.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PAFACDOC_02588 2.6e-191 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAFACDOC_02589 5.8e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAFACDOC_02590 4.9e-22
PAFACDOC_02591 2.9e-70
PAFACDOC_02592 1.2e-163 K LysR substrate binding domain
PAFACDOC_02593 2.4e-243 P Sodium:sulfate symporter transmembrane region
PAFACDOC_02594 3.7e-287 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
PAFACDOC_02595 1.5e-264 S response to antibiotic
PAFACDOC_02596 2.8e-134 S zinc-ribbon domain
PAFACDOC_02598 3.2e-37
PAFACDOC_02599 8.3e-108 aroD S Alpha/beta hydrolase family
PAFACDOC_02600 1.7e-15 aroD S Alpha/beta hydrolase family
PAFACDOC_02601 2.6e-176 S Phosphotransferase system, EIIC
PAFACDOC_02602 2.5e-269 I acetylesterase activity
PAFACDOC_02603 1.6e-51 sdrF M Collagen binding domain
PAFACDOC_02604 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PAFACDOC_02605 1.8e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAFACDOC_02606 2.4e-113 ywnB S NAD(P)H-binding
PAFACDOC_02607 4.8e-209 brnQ U Component of the transport system for branched-chain amino acids
PAFACDOC_02609 1.1e-161 rrmA 2.1.1.187 H Methyltransferase
PAFACDOC_02610 1.7e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAFACDOC_02611 4.3e-206 XK27_05220 S AI-2E family transporter
PAFACDOC_02612 3.9e-57 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PAFACDOC_02613 1.3e-193 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PAFACDOC_02614 1.1e-115 cutC P Participates in the control of copper homeostasis
PAFACDOC_02615 2.6e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PAFACDOC_02616 4.7e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAFACDOC_02617 2.7e-120 yjbM 2.7.6.5 S RelA SpoT domain protein
PAFACDOC_02618 3.6e-114 yjbH Q Thioredoxin
PAFACDOC_02619 0.0 pepF E oligoendopeptidase F
PAFACDOC_02620 2e-180 coiA 3.6.4.12 S Competence protein
PAFACDOC_02621 2e-13 coiA 3.6.4.12 S Competence protein
PAFACDOC_02622 2.2e-131 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PAFACDOC_02623 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PAFACDOC_02624 2.2e-139 yhfI S Metallo-beta-lactamase superfamily
PAFACDOC_02625 1.3e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PAFACDOC_02635 5.5e-08
PAFACDOC_02643 4.9e-190
PAFACDOC_02644 2e-163 ytrB V ABC transporter
PAFACDOC_02645 1.4e-59 ytrA K helix_turn_helix gluconate operon transcriptional repressor
PAFACDOC_02646 8.1e-22
PAFACDOC_02647 8e-91 K acetyltransferase
PAFACDOC_02648 1e-84 K GNAT family
PAFACDOC_02649 1.1e-83 6.3.3.2 S ASCH
PAFACDOC_02650 1.3e-96 puuR K Cupin domain
PAFACDOC_02651 3.1e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAFACDOC_02652 4.5e-149 potB P ABC transporter permease
PAFACDOC_02653 2.9e-140 potC P ABC transporter permease
PAFACDOC_02654 1.5e-205 potD P ABC transporter
PAFACDOC_02655 4.3e-40
PAFACDOC_02656 3e-226 ndh 1.6.99.3 C NADH dehydrogenase
PAFACDOC_02657 8.4e-75 K Transcriptional regulator
PAFACDOC_02658 4.9e-24 elaA S GNAT family
PAFACDOC_02659 8.9e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAFACDOC_02660 6.8e-57
PAFACDOC_02661 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PAFACDOC_02662 1.8e-130
PAFACDOC_02663 2.8e-176 sepS16B
PAFACDOC_02664 7.4e-67 gcvH E Glycine cleavage H-protein
PAFACDOC_02665 3.6e-53 lytE M LysM domain protein
PAFACDOC_02666 1.8e-256 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
PAFACDOC_02667 2.8e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PAFACDOC_02669 1.5e-239 xylP1 G MFS/sugar transport protein
PAFACDOC_02670 8.7e-122 qmcA O prohibitin homologues
PAFACDOC_02671 1.1e-29
PAFACDOC_02672 6.5e-281 pipD E Dipeptidase
PAFACDOC_02673 3e-40
PAFACDOC_02674 5.7e-95 bioY S BioY family
PAFACDOC_02675 1.1e-175 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PAFACDOC_02676 1.8e-61 S CHY zinc finger
PAFACDOC_02677 7.8e-222 mtnE 2.6.1.83 E Aminotransferase
PAFACDOC_02678 3.8e-218
PAFACDOC_02679 6e-154 tagG U Transport permease protein
PAFACDOC_02680 1e-201 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PAFACDOC_02681 8.4e-44
PAFACDOC_02682 2.8e-91 K Transcriptional regulator PadR-like family
PAFACDOC_02683 1.3e-257 P Major Facilitator Superfamily
PAFACDOC_02684 4.7e-241 amtB P ammonium transporter
PAFACDOC_02685 2.6e-30
PAFACDOC_02686 5.2e-109 S membrane transporter protein
PAFACDOC_02687 2.3e-54 azlD S branched-chain amino acid
PAFACDOC_02688 5.1e-131 azlC E branched-chain amino acid
PAFACDOC_02689 3.2e-89 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PAFACDOC_02690 2.1e-236 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PAFACDOC_02691 1.3e-213 hpk31 2.7.13.3 T Histidine kinase
PAFACDOC_02692 3.2e-124 K response regulator
PAFACDOC_02693 5.5e-124 yoaK S Protein of unknown function (DUF1275)
PAFACDOC_02694 2.6e-161 prsA 3.1.3.16, 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAFACDOC_02695 5.2e-212 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAFACDOC_02696 5.2e-125 XK27_01040 S Protein of unknown function (DUF1129)
PAFACDOC_02697 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAFACDOC_02698 9.8e-31 yyzM S Bacterial protein of unknown function (DUF951)
PAFACDOC_02699 2.4e-156 spo0J K Belongs to the ParB family
PAFACDOC_02700 1.8e-136 soj D Sporulation initiation inhibitor
PAFACDOC_02701 7.9e-149 noc K Belongs to the ParB family
PAFACDOC_02702 1.9e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PAFACDOC_02703 1.2e-225 nupG F Nucleoside
PAFACDOC_02704 2.3e-219 S Bacterial membrane protein YfhO
PAFACDOC_02705 2.1e-241 npr 1.11.1.1 C NADH oxidase
PAFACDOC_02706 0.0
PAFACDOC_02707 3.5e-61
PAFACDOC_02708 9.3e-192 S Fn3-like domain
PAFACDOC_02709 4e-103 S WxL domain surface cell wall-binding
PAFACDOC_02710 3.5e-78 S WxL domain surface cell wall-binding
PAFACDOC_02711 7.8e-121 draG 3.2.2.24 O ADP-ribosylglycohydrolase
PAFACDOC_02712 3.3e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAFACDOC_02713 2e-42
PAFACDOC_02714 9.9e-82 hit FG histidine triad
PAFACDOC_02715 1.6e-134 ecsA V ABC transporter, ATP-binding protein
PAFACDOC_02716 6.2e-224 ecsB U ABC transporter
PAFACDOC_02717 3.2e-152 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PAFACDOC_02718 1.7e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAFACDOC_02719 1.6e-54 ytzB S Peptidase propeptide and YPEB domain
PAFACDOC_02720 7.4e-115 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAFACDOC_02721 8.3e-17 S Protein of unknown function (DUF1093)
PAFACDOC_02722 2.1e-20 3.4.21.19 M Belongs to the peptidase S1B family
PAFACDOC_02723 6.2e-44 S Psort location CytoplasmicMembrane, score
PAFACDOC_02725 0.0 pacL 3.6.3.8 P P-type ATPase
PAFACDOC_02726 2.7e-42
PAFACDOC_02727 2.8e-55 repA S Replication initiator protein A
PAFACDOC_02728 1.6e-184 U Relaxase/Mobilisation nuclease domain
PAFACDOC_02729 1.1e-54 S Bacterial mobilisation protein (MobC)
PAFACDOC_02730 1.7e-36 K sequence-specific DNA binding
PAFACDOC_02731 6.1e-45 S Phage derived protein Gp49-like (DUF891)
PAFACDOC_02732 2.8e-105 L Integrase
PAFACDOC_02733 1.7e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PAFACDOC_02734 3.2e-59 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PAFACDOC_02735 4.8e-62 S Protein of unknown function (DUF2992)
PAFACDOC_02736 6.8e-10 K Helix-turn-helix XRE-family like proteins
PAFACDOC_02737 1.2e-29
PAFACDOC_02738 3.1e-51 NU Mycoplasma protein of unknown function, DUF285
PAFACDOC_02739 8.1e-117 K Bacterial regulatory proteins, tetR family
PAFACDOC_02740 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAFACDOC_02741 2.5e-289 yjcE P Sodium proton antiporter
PAFACDOC_02742 5.7e-152 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PAFACDOC_02743 1.8e-159 K LysR substrate binding domain
PAFACDOC_02744 4e-281 1.3.5.4 C FAD binding domain
PAFACDOC_02745 0.0 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
PAFACDOC_02746 4.2e-231 mdxE G Bacterial extracellular solute-binding protein
PAFACDOC_02747 2.2e-227 malC P Binding-protein-dependent transport system inner membrane component
PAFACDOC_02748 1.4e-161 malD P ABC transporter permease
PAFACDOC_02749 1.6e-149 malA S maltodextrose utilization protein MalA
PAFACDOC_02750 5e-259 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
PAFACDOC_02751 4e-209 msmK P Belongs to the ABC transporter superfamily
PAFACDOC_02752 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PAFACDOC_02753 0.0 3.2.1.96 G Glycosyl hydrolase family 85
PAFACDOC_02754 4.6e-25 S Cysteine-rich secretory protein family
PAFACDOC_02755 1.1e-36 S MORN repeat
PAFACDOC_02756 0.0 XK27_09800 I Acyltransferase family
PAFACDOC_02757 7.1e-37 S Transglycosylase associated protein
PAFACDOC_02758 4.4e-84
PAFACDOC_02759 7.2e-23
PAFACDOC_02760 8.7e-72 asp S Asp23 family, cell envelope-related function
PAFACDOC_02761 5.3e-72 asp2 S Asp23 family, cell envelope-related function
PAFACDOC_02762 2.6e-149 Q Fumarylacetoacetate (FAA) hydrolase family
PAFACDOC_02763 1.5e-154 yjdB S Domain of unknown function (DUF4767)
PAFACDOC_02764 3.4e-10 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PAFACDOC_02765 1.1e-101 G Glycogen debranching enzyme
PAFACDOC_02766 0.0 pepN 3.4.11.2 E aminopeptidase
PAFACDOC_02767 7.3e-86 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PAFACDOC_02769 2.3e-24 P Concanavalin A-like lectin/glucanases superfamily
PAFACDOC_02770 0.0 yhcA V ABC transporter, ATP-binding protein
PAFACDOC_02771 1.2e-95 cadD P Cadmium resistance transporter
PAFACDOC_02772 2e-49 K Transcriptional regulator, ArsR family
PAFACDOC_02773 1.9e-116 S SNARE associated Golgi protein
PAFACDOC_02774 1.1e-46
PAFACDOC_02775 6.8e-72 T Belongs to the universal stress protein A family
PAFACDOC_02776 4.1e-284 mntH P H( )-stimulated, divalent metal cation uptake system
PAFACDOC_02777 6.1e-122 K Helix-turn-helix XRE-family like proteins
PAFACDOC_02778 2.8e-82 gtrA S GtrA-like protein
PAFACDOC_02779 6.6e-113 zmp3 O Zinc-dependent metalloprotease
PAFACDOC_02780 2.4e-121 E GDSL-like Lipase/Acylhydrolase family
PAFACDOC_02781 1.4e-77
PAFACDOC_02782 8.1e-38 S Bacteriocin-protection, YdeI or OmpD-Associated
PAFACDOC_02783 3.3e-97 FG HIT domain
PAFACDOC_02784 1.7e-173 S Aldo keto reductase
PAFACDOC_02785 1.9e-52 yitW S Pfam:DUF59
PAFACDOC_02786 1.9e-160 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAFACDOC_02787 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PAFACDOC_02788 5e-195 blaA6 V Beta-lactamase
PAFACDOC_02789 6.2e-96 V VanZ like family
PAFACDOC_02790 6e-140 K Helix-turn-helix domain
PAFACDOC_02791 2.9e-38 S TfoX C-terminal domain
PAFACDOC_02792 2.3e-227 hpk9 2.7.13.3 T GHKL domain
PAFACDOC_02793 8.4e-263
PAFACDOC_02794 8.4e-75
PAFACDOC_02795 3.6e-183 S Cell surface protein
PAFACDOC_02796 1.7e-101 S WxL domain surface cell wall-binding
PAFACDOC_02797 1.7e-43 ankB S ankyrin repeats
PAFACDOC_02798 2.1e-31
PAFACDOC_02799 6.6e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PAFACDOC_02800 3.9e-206 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAFACDOC_02801 1.2e-149 bla1 3.5.2.6 V Beta-lactamase enzyme family
PAFACDOC_02802 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAFACDOC_02803 1.1e-184 S DUF218 domain
PAFACDOC_02804 2.2e-126
PAFACDOC_02805 3.1e-63 L Belongs to the 'phage' integrase family
PAFACDOC_02812 4.5e-78 K Peptidase S24-like
PAFACDOC_02813 8.8e-20
PAFACDOC_02816 7.2e-63 S DNA binding
PAFACDOC_02823 6.3e-18
PAFACDOC_02825 2.8e-146 S Protein of unknown function (DUF1351)
PAFACDOC_02826 5.6e-217 2.7.7.65 T diguanylate cyclase
PAFACDOC_02827 3.3e-33
PAFACDOC_02828 2e-35
PAFACDOC_02829 3.3e-80 K AsnC family
PAFACDOC_02830 8.2e-173 ykfC 3.4.14.13 M NlpC/P60 family
PAFACDOC_02831 4.1e-161 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_02833 3.8e-23
PAFACDOC_02834 1.9e-138 3.6.1.13, 3.6.1.55 F NUDIX domain
PAFACDOC_02835 9.8e-214 yceI EGP Major facilitator Superfamily
PAFACDOC_02836 4.2e-47
PAFACDOC_02837 6.5e-91 S ECF-type riboflavin transporter, S component
PAFACDOC_02839 2.6e-169 EG EamA-like transporter family
PAFACDOC_02840 2.3e-38 gcvR T Belongs to the UPF0237 family
PAFACDOC_02841 3e-243 XK27_08635 S UPF0210 protein
PAFACDOC_02842 1.6e-134 K response regulator
PAFACDOC_02843 2.9e-287 yclK 2.7.13.3 T Histidine kinase
PAFACDOC_02844 9.4e-217 ywbD 2.1.1.191 J S-adenosylmethionine-dependent methyltransferase
PAFACDOC_02845 9.7e-155 glcU U sugar transport
PAFACDOC_02846 2.8e-88
PAFACDOC_02847 2.9e-176 L Initiator Replication protein
PAFACDOC_02848 2.5e-29
PAFACDOC_02849 2.3e-107 L Integrase
PAFACDOC_02850 2.4e-40 K prlF antitoxin for toxin YhaV_toxin
PAFACDOC_02851 5.3e-59 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAFACDOC_02852 0.0 ybfG M peptidoglycan-binding domain-containing protein
PAFACDOC_02854 4.4e-127 terC P integral membrane protein, YkoY family
PAFACDOC_02856 2.2e-38 sirR K Helix-turn-helix diphteria tox regulatory element
PAFACDOC_02857 1.5e-249 mntH P H( )-stimulated, divalent metal cation uptake system
PAFACDOC_02858 6.2e-57 T Belongs to the universal stress protein A family
PAFACDOC_02859 1e-96 tnpR1 L Resolvase, N terminal domain
PAFACDOC_02861 1.6e-39 L Transposase
PAFACDOC_02862 8.8e-95 L 4.5 Transposon and IS
PAFACDOC_02863 4e-151 glcU U sugar transport
PAFACDOC_02864 1.1e-95 tnp L DDE domain
PAFACDOC_02865 5.4e-64 tcmJ G COG0662 Mannose-6-phosphate isomerase
PAFACDOC_02866 6.4e-46 M domain protein
PAFACDOC_02867 6e-52 ykoF S YKOF-related Family
PAFACDOC_02868 3.3e-11 glnA 6.3.1.2 E glutamine synthetase
PAFACDOC_02869 1.5e-193 glnA 6.3.1.2 E glutamine synthetase
PAFACDOC_02870 7.6e-110 XK27_07075 V CAAX protease self-immunity
PAFACDOC_02871 1.1e-56 hxlR K HxlR-like helix-turn-helix
PAFACDOC_02872 1.5e-129 L Helix-turn-helix domain
PAFACDOC_02873 1.7e-159 L hmm pf00665
PAFACDOC_02874 6.7e-232 EGP Major facilitator Superfamily
PAFACDOC_02875 5.4e-36 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAFACDOC_02877 6.7e-246 cycA E Amino acid permease
PAFACDOC_02878 1.2e-123 repA S Replication initiator protein A
PAFACDOC_02879 5.5e-18
PAFACDOC_02880 3.8e-40 S protein conserved in bacteria
PAFACDOC_02881 2.6e-40
PAFACDOC_02882 1.2e-26
PAFACDOC_02883 1.2e-82 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PAFACDOC_02884 2.8e-239 P Sodium:sulfate symporter transmembrane region
PAFACDOC_02885 2.4e-301 1.3.5.4 C FMN_bind
PAFACDOC_02886 5.4e-132 K LysR family
PAFACDOC_02887 7.9e-60 mleR K LysR substrate binding domain
PAFACDOC_02889 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PAFACDOC_02890 2.7e-79 T Universal stress protein family
PAFACDOC_02891 2.2e-99 padR K Virulence activator alpha C-term
PAFACDOC_02892 1.5e-42 S COG NOG38524 non supervised orthologous group
PAFACDOC_02895 4.9e-57 pemK T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAFACDOC_02896 4.8e-44 T Antidote-toxin recognition MazE, bacterial antitoxin
PAFACDOC_02897 2.3e-107 L Integrase
PAFACDOC_02898 4.9e-16
PAFACDOC_02899 1.5e-65 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAFACDOC_02900 4.5e-238 asdA 4.1.1.12 E Aminotransferase class I and II
PAFACDOC_02901 1.2e-198 aspT U Predicted Permease Membrane Region
PAFACDOC_02902 1.9e-54
PAFACDOC_02903 3e-238 EGP Major Facilitator Superfamily
PAFACDOC_02904 0.0 mco Q Multicopper oxidase
PAFACDOC_02905 4.7e-25
PAFACDOC_02907 8e-18
PAFACDOC_02908 1.9e-56 XK27_01125 L PFAM IS66 Orf2 family protein
PAFACDOC_02909 3.7e-24
PAFACDOC_02910 1.5e-194 pbuX F xanthine permease
PAFACDOC_02911 7.4e-57 L Transposase IS66 family
PAFACDOC_02912 3.1e-56 tnp2PF3 L Transposase DDE domain
PAFACDOC_02913 9.1e-153 cjaA ET ABC transporter substrate-binding protein
PAFACDOC_02914 4.3e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAFACDOC_02915 4.3e-113 P ABC transporter permease
PAFACDOC_02916 4.2e-113 papP P ABC transporter, permease protein
PAFACDOC_02917 3.5e-130 L MobA MobL family protein
PAFACDOC_02918 1.3e-117
PAFACDOC_02919 1.5e-65
PAFACDOC_02920 0.0 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PAFACDOC_02921 8e-68 C lyase activity
PAFACDOC_02922 2e-184 L Psort location Cytoplasmic, score
PAFACDOC_02923 1.7e-18
PAFACDOC_02924 1.1e-43 relB L Addiction module antitoxin, RelB DinJ family
PAFACDOC_02925 5.7e-86
PAFACDOC_02926 1.2e-40
PAFACDOC_02927 7.9e-26
PAFACDOC_02928 3.6e-143 L MobA MobL family protein
PAFACDOC_02929 1.4e-125 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PAFACDOC_02931 1.6e-100 S Protein of unknown function (DUF1211)
PAFACDOC_02932 1.2e-191 1.1.1.219 GM Male sterility protein
PAFACDOC_02933 4.8e-94 K Bacterial regulatory proteins, tetR family
PAFACDOC_02934 4.7e-28 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAFACDOC_02935 1.5e-15 S Alpha/beta hydrolase of unknown function (DUF915)
PAFACDOC_02936 1.1e-130 S Phage Mu protein F like protein
PAFACDOC_02937 1.2e-12 ytgB S Transglycosylase associated protein
PAFACDOC_02938 2.1e-11
PAFACDOC_02939 3.8e-98 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PAFACDOC_02940 7e-67 L Replication protein
PAFACDOC_02941 4.7e-42 L Replication protein
PAFACDOC_02942 1.2e-23 S Family of unknown function (DUF5388)
PAFACDOC_02943 1.6e-143 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PAFACDOC_02944 3.7e-31 tnp2PF3 L manually curated
PAFACDOC_02945 1.8e-85 2.5.1.74 H UbiA prenyltransferase family
PAFACDOC_02946 1.2e-163 L PFAM Integrase catalytic region
PAFACDOC_02947 1.7e-88 L Helix-turn-helix domain
PAFACDOC_02948 3.8e-40
PAFACDOC_02949 6e-31 cspA K Cold shock protein
PAFACDOC_02950 7e-57
PAFACDOC_02951 2.7e-31 L Transposase
PAFACDOC_02952 3.1e-36 L Resolvase, N terminal domain
PAFACDOC_02954 2.6e-126 tnp L DDE domain
PAFACDOC_02956 4.8e-58
PAFACDOC_02957 4.2e-70 S Pyrimidine dimer DNA glycosylase
PAFACDOC_02958 3e-116 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAFACDOC_02959 1.7e-90 L Transposase and inactivated derivatives, IS30 family
PAFACDOC_02960 4.6e-41 dps P Belongs to the Dps family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)