ORF_ID e_value Gene_name EC_number CAZy COGs Description
IPNEDICM_00001 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
IPNEDICM_00002 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
IPNEDICM_00003 1.2e-144 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
IPNEDICM_00004 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
IPNEDICM_00005 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
IPNEDICM_00006 1.6e-244 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
IPNEDICM_00007 4.2e-182 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
IPNEDICM_00008 2.6e-35 yaaA S S4 domain protein YaaA
IPNEDICM_00009 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IPNEDICM_00010 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
IPNEDICM_00011 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
IPNEDICM_00012 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
IPNEDICM_00013 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
IPNEDICM_00014 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
IPNEDICM_00015 5.6e-36
IPNEDICM_00016 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IPNEDICM_00017 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
IPNEDICM_00018 2.8e-135
IPNEDICM_00019 1.3e-258 glnPH2 P ABC transporter permease
IPNEDICM_00020 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IPNEDICM_00021 6.4e-224 S Cysteine-rich secretory protein family
IPNEDICM_00022 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
IPNEDICM_00023 1.4e-112
IPNEDICM_00024 6.3e-202 yibE S overlaps another CDS with the same product name
IPNEDICM_00025 4.9e-129 yibF S overlaps another CDS with the same product name
IPNEDICM_00026 2.5e-144 I alpha/beta hydrolase fold
IPNEDICM_00027 0.0 G Belongs to the glycosyl hydrolase 31 family
IPNEDICM_00028 4.1e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
IPNEDICM_00029 2.3e-43 ybhL S Belongs to the BI1 family
IPNEDICM_00030 1.2e-210 S Bacterial protein of unknown function (DUF871)
IPNEDICM_00031 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IPNEDICM_00032 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
IPNEDICM_00033 1.5e-102 srtA 3.4.22.70 M sortase family
IPNEDICM_00034 2.5e-35 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
IPNEDICM_00035 5.9e-24
IPNEDICM_00036 2.1e-173 M Glycosyl hydrolases family 25
IPNEDICM_00037 5e-29
IPNEDICM_00038 7.9e-19
IPNEDICM_00040 1.1e-07
IPNEDICM_00041 2.2e-19 S Phage uncharacterised protein (Phage_XkdX)
IPNEDICM_00042 7.1e-38
IPNEDICM_00048 1.6e-36
IPNEDICM_00049 1.1e-08
IPNEDICM_00050 6.5e-125 Z012_12235 S Baseplate J-like protein
IPNEDICM_00051 9.5e-33
IPNEDICM_00052 1.2e-48
IPNEDICM_00053 5.7e-104
IPNEDICM_00054 2.1e-46
IPNEDICM_00055 1.2e-58 M LysM domain
IPNEDICM_00056 0.0 3.4.14.13 M Phage tail tape measure protein TP901
IPNEDICM_00058 9e-27
IPNEDICM_00059 4e-56
IPNEDICM_00060 9.7e-153 Z012_02110 S Protein of unknown function (DUF3383)
IPNEDICM_00061 4.7e-57
IPNEDICM_00062 1.7e-45
IPNEDICM_00063 2.6e-75
IPNEDICM_00064 2.3e-29 S Protein of unknown function (DUF4054)
IPNEDICM_00065 4.6e-142 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
IPNEDICM_00066 1.1e-59
IPNEDICM_00067 2e-83 S Uncharacterized protein conserved in bacteria (DUF2213)
IPNEDICM_00068 9.8e-16 S Lysin motif
IPNEDICM_00069 2.2e-26 S HNH endonuclease
IPNEDICM_00071 9.5e-96 S Phage Mu protein F like protein
IPNEDICM_00072 7e-142 S Protein of unknown function (DUF1073)
IPNEDICM_00073 1.8e-230 S Terminase-like family
IPNEDICM_00074 1.5e-28 L Terminase small subunit
IPNEDICM_00075 5.2e-10 hicA N HicA toxin of bacterial toxin-antitoxin,
IPNEDICM_00076 2.7e-35 S HicB_like antitoxin of bacterial toxin-antitoxin system
IPNEDICM_00084 2.1e-14
IPNEDICM_00085 1.2e-40 rusA 3.1.22.4 L Endodeoxyribonuclease RusA
IPNEDICM_00091 1.4e-51 dnaC L IstB-like ATP binding protein
IPNEDICM_00092 2.3e-33 S Conserved phage C-terminus (Phg_2220_C)
IPNEDICM_00093 2.4e-59 S Protein of unknown function (DUF1071)
IPNEDICM_00097 5e-07 K Helix-turn-helix XRE-family like proteins
IPNEDICM_00098 7.2e-10
IPNEDICM_00103 3.5e-92 S AntA/AntB antirepressor
IPNEDICM_00104 4.3e-15
IPNEDICM_00106 1.4e-12
IPNEDICM_00107 1.1e-13 ansR 3.4.21.88 K Cro/C1-type HTH DNA-binding domain
IPNEDICM_00108 5.7e-18 S Pfam:Peptidase_M78
IPNEDICM_00113 1.6e-20 S YjcQ protein
IPNEDICM_00114 4.2e-180 sip L Belongs to the 'phage' integrase family
IPNEDICM_00115 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
IPNEDICM_00116 5.4e-201 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
IPNEDICM_00117 0.0 dnaK O Heat shock 70 kDa protein
IPNEDICM_00118 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
IPNEDICM_00119 4.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
IPNEDICM_00120 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
IPNEDICM_00121 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
IPNEDICM_00122 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
IPNEDICM_00123 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
IPNEDICM_00124 3.2e-47 rplGA J ribosomal protein
IPNEDICM_00125 8.8e-47 ylxR K Protein of unknown function (DUF448)
IPNEDICM_00126 1.4e-196 nusA K Participates in both transcription termination and antitermination
IPNEDICM_00127 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
IPNEDICM_00128 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IPNEDICM_00129 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
IPNEDICM_00130 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
IPNEDICM_00131 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
IPNEDICM_00132 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
IPNEDICM_00133 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
IPNEDICM_00134 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
IPNEDICM_00135 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
IPNEDICM_00136 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
IPNEDICM_00137 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
IPNEDICM_00138 2.9e-116 plsC 2.3.1.51 I Acyltransferase
IPNEDICM_00139 3.9e-223 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
IPNEDICM_00140 0.0 pepO 3.4.24.71 O Peptidase family M13
IPNEDICM_00141 0.0 mdlB V ABC transporter
IPNEDICM_00142 0.0 mdlA V ABC transporter
IPNEDICM_00143 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
IPNEDICM_00144 3e-38 ynzC S UPF0291 protein
IPNEDICM_00145 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IPNEDICM_00146 9.8e-146 E GDSL-like Lipase/Acylhydrolase family
IPNEDICM_00147 5.4e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
IPNEDICM_00148 4.6e-213 S SLAP domain
IPNEDICM_00149 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
IPNEDICM_00150 3.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
IPNEDICM_00151 3.4e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IPNEDICM_00152 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
IPNEDICM_00153 4.9e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IPNEDICM_00154 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
IPNEDICM_00155 2.7e-258 yfnA E amino acid
IPNEDICM_00156 0.0 V FtsX-like permease family
IPNEDICM_00157 4.1e-133 cysA V ABC transporter, ATP-binding protein
IPNEDICM_00158 3.4e-23
IPNEDICM_00160 2.5e-288 pipD E Dipeptidase
IPNEDICM_00161 3.6e-161 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
IPNEDICM_00162 0.0 smc D Required for chromosome condensation and partitioning
IPNEDICM_00163 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
IPNEDICM_00164 2.1e-308 oppA E ABC transporter substrate-binding protein
IPNEDICM_00165 3.1e-240 oppA E ABC transporter substrate-binding protein
IPNEDICM_00166 9.7e-46 oppA E ABC transporter substrate-binding protein
IPNEDICM_00167 5.6e-132 oppC P Binding-protein-dependent transport system inner membrane component
IPNEDICM_00168 2.6e-172 oppB P ABC transporter permease
IPNEDICM_00169 1.5e-170 oppF P Belongs to the ABC transporter superfamily
IPNEDICM_00170 1.1e-192 oppD P Belongs to the ABC transporter superfamily
IPNEDICM_00171 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
IPNEDICM_00172 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
IPNEDICM_00173 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IPNEDICM_00174 7.6e-305 yloV S DAK2 domain fusion protein YloV
IPNEDICM_00175 4e-57 asp S Asp23 family, cell envelope-related function
IPNEDICM_00176 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
IPNEDICM_00177 1.4e-30
IPNEDICM_00178 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
IPNEDICM_00179 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
IPNEDICM_00180 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
IPNEDICM_00181 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
IPNEDICM_00182 1.1e-138 stp 3.1.3.16 T phosphatase
IPNEDICM_00183 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IPNEDICM_00184 1.6e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IPNEDICM_00185 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IPNEDICM_00186 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
IPNEDICM_00187 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
IPNEDICM_00188 1.1e-77 6.3.3.2 S ASCH
IPNEDICM_00189 2.6e-300 recN L May be involved in recombinational repair of damaged DNA
IPNEDICM_00190 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
IPNEDICM_00191 1e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
IPNEDICM_00192 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
IPNEDICM_00193 2.9e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
IPNEDICM_00194 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
IPNEDICM_00195 1.1e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IPNEDICM_00196 3.4e-71 yqhY S Asp23 family, cell envelope-related function
IPNEDICM_00197 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IPNEDICM_00198 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
IPNEDICM_00199 1.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
IPNEDICM_00200 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
IPNEDICM_00201 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
IPNEDICM_00202 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
IPNEDICM_00204 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
IPNEDICM_00205 4.3e-298 S Predicted membrane protein (DUF2207)
IPNEDICM_00206 1.2e-155 cinI S Serine hydrolase (FSH1)
IPNEDICM_00207 1e-205 M Glycosyl hydrolases family 25
IPNEDICM_00209 8.5e-178 I Carboxylesterase family
IPNEDICM_00210 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
IPNEDICM_00211 2.9e-277 V ABC-type multidrug transport system, ATPase and permease components
IPNEDICM_00212 4.5e-291 V ABC-type multidrug transport system, ATPase and permease components
IPNEDICM_00213 1.7e-148 S haloacid dehalogenase-like hydrolase
IPNEDICM_00214 7e-50
IPNEDICM_00215 1.9e-37
IPNEDICM_00216 1.2e-63 S Alpha beta hydrolase
IPNEDICM_00217 1e-23 S Alpha beta hydrolase
IPNEDICM_00218 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
IPNEDICM_00219 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
IPNEDICM_00220 7.1e-46
IPNEDICM_00221 3.1e-148 glcU U sugar transport
IPNEDICM_00222 3.7e-250 lctP C L-lactate permease
IPNEDICM_00223 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
IPNEDICM_00224 6.4e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
IPNEDICM_00225 8.8e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
IPNEDICM_00226 3.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
IPNEDICM_00227 7.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
IPNEDICM_00228 9.1e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
IPNEDICM_00229 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
IPNEDICM_00230 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
IPNEDICM_00231 1.5e-102 GM NmrA-like family
IPNEDICM_00232 3.4e-140 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_00233 2e-57 clcA P chloride
IPNEDICM_00234 2.5e-115 L PFAM Integrase catalytic
IPNEDICM_00235 1.3e-284 lsa S ABC transporter
IPNEDICM_00236 2.4e-44
IPNEDICM_00237 1.3e-122 sdaAB 4.3.1.17 E Serine dehydratase beta chain
IPNEDICM_00238 3.8e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
IPNEDICM_00239 9.7e-52 S Iron-sulfur cluster assembly protein
IPNEDICM_00240 6.9e-116 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
IPNEDICM_00241 5e-48 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
IPNEDICM_00242 3.7e-243 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
IPNEDICM_00243 1.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IPNEDICM_00244 3.3e-275 yjeM E Amino Acid
IPNEDICM_00245 5.8e-83 S Fic/DOC family
IPNEDICM_00246 1e-276
IPNEDICM_00247 3.2e-77
IPNEDICM_00248 2.3e-87 S Protein of unknown function (DUF805)
IPNEDICM_00249 5.6e-68 O OsmC-like protein
IPNEDICM_00250 2.1e-208 EGP Major facilitator Superfamily
IPNEDICM_00251 2.5e-215 sptS 2.7.13.3 T Histidine kinase
IPNEDICM_00252 6.4e-24 K response regulator
IPNEDICM_00253 5.2e-08
IPNEDICM_00254 3e-89 ntd 2.4.2.6 F Nucleoside
IPNEDICM_00255 8.6e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
IPNEDICM_00256 7.5e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
IPNEDICM_00257 2.2e-82 uspA T universal stress protein
IPNEDICM_00259 3.9e-15 phnD P Phosphonate ABC transporter
IPNEDICM_00260 3.1e-133 phnD P Phosphonate ABC transporter
IPNEDICM_00261 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
IPNEDICM_00262 1.4e-120 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
IPNEDICM_00263 1.3e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
IPNEDICM_00264 1.4e-81 L COG3385 FOG Transposase and inactivated derivatives
IPNEDICM_00265 3.7e-27 L Transposase
IPNEDICM_00266 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
IPNEDICM_00267 8.2e-85 scrR K Periplasmic binding protein domain
IPNEDICM_00269 2.4e-70 scrR K Periplasmic binding protein domain
IPNEDICM_00270 5.5e-36
IPNEDICM_00271 2e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
IPNEDICM_00272 1.1e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
IPNEDICM_00273 1.1e-220 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
IPNEDICM_00274 0.0 lacZ 3.2.1.23 G -beta-galactosidase
IPNEDICM_00275 0.0 lacS G Transporter
IPNEDICM_00276 3.2e-165 lacR K Transcriptional regulator
IPNEDICM_00277 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
IPNEDICM_00278 3.5e-145 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
IPNEDICM_00279 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
IPNEDICM_00280 7.6e-163 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
IPNEDICM_00281 2e-106 K Transcriptional regulator, AbiEi antitoxin
IPNEDICM_00282 1.2e-188 K Periplasmic binding protein-like domain
IPNEDICM_00283 5.8e-73 S domain protein
IPNEDICM_00285 4.9e-251 ade 3.5.4.2 F Adenine deaminase C-terminal domain
IPNEDICM_00286 3e-145 potD2 P ABC transporter
IPNEDICM_00287 1.6e-135 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
IPNEDICM_00288 2.2e-108 potC3 E Binding-protein-dependent transport system inner membrane component
IPNEDICM_00289 3.6e-88 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
IPNEDICM_00290 7.7e-10 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
IPNEDICM_00291 2.9e-109 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
IPNEDICM_00292 1.7e-36 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
IPNEDICM_00293 1.1e-59 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
IPNEDICM_00294 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
IPNEDICM_00295 1.9e-121 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
IPNEDICM_00296 2.3e-56 G Xylose isomerase domain protein TIM barrel
IPNEDICM_00297 8.4e-90 nanK GK ROK family
IPNEDICM_00298 2.9e-122 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
IPNEDICM_00299 3.7e-66 K Helix-turn-helix domain, rpiR family
IPNEDICM_00300 7.1e-263 E ABC transporter, substratebinding protein
IPNEDICM_00301 9.1e-10 K peptidyl-tyrosine sulfation
IPNEDICM_00303 1.2e-128 S interspecies interaction between organisms
IPNEDICM_00304 2.7e-34
IPNEDICM_00307 1.9e-21
IPNEDICM_00308 6e-148
IPNEDICM_00309 6.7e-170
IPNEDICM_00310 2e-263 glnA 6.3.1.2 E glutamine synthetase
IPNEDICM_00311 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
IPNEDICM_00312 1.5e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
IPNEDICM_00313 1.5e-65 yqhL P Rhodanese-like protein
IPNEDICM_00314 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
IPNEDICM_00315 4e-119 gluP 3.4.21.105 S Rhomboid family
IPNEDICM_00316 2.7e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IPNEDICM_00317 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
IPNEDICM_00318 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
IPNEDICM_00319 0.0 S membrane
IPNEDICM_00320 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
IPNEDICM_00321 1.3e-38 S RelB antitoxin
IPNEDICM_00322 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
IPNEDICM_00323 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
IPNEDICM_00324 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
IPNEDICM_00325 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IPNEDICM_00326 8.7e-159 isdE P Periplasmic binding protein
IPNEDICM_00327 6.3e-123 M Iron Transport-associated domain
IPNEDICM_00328 3e-09 isdH M Iron Transport-associated domain
IPNEDICM_00329 2.2e-89
IPNEDICM_00330 2.2e-113 S SLAP domain
IPNEDICM_00331 2.6e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
IPNEDICM_00332 5.7e-46 S An automated process has identified a potential problem with this gene model
IPNEDICM_00333 3e-137 S Protein of unknown function (DUF3100)
IPNEDICM_00334 4e-245 3.5.1.47 S Peptidase dimerisation domain
IPNEDICM_00335 5.8e-230 Q Imidazolonepropionase and related amidohydrolases
IPNEDICM_00336 0.0 oppA E ABC transporter
IPNEDICM_00337 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
IPNEDICM_00338 0.0 mco Q Multicopper oxidase
IPNEDICM_00339 1.9e-25
IPNEDICM_00340 1.9e-158 metQ1 P Belongs to the nlpA lipoprotein family
IPNEDICM_00341 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
IPNEDICM_00342 2.4e-62 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
IPNEDICM_00343 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
IPNEDICM_00344 1.6e-199 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
IPNEDICM_00345 8.1e-91 cjaA ET ABC transporter substrate-binding protein
IPNEDICM_00346 3e-53 cjaA ET ABC transporter substrate-binding protein
IPNEDICM_00347 1.8e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IPNEDICM_00348 2e-110 P ABC transporter permease
IPNEDICM_00349 9.6e-110 papP P ABC transporter, permease protein
IPNEDICM_00351 8.8e-62 yodB K Transcriptional regulator, HxlR family
IPNEDICM_00352 5e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IPNEDICM_00353 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
IPNEDICM_00354 2.2e-163 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
IPNEDICM_00355 1.5e-72 S Aminoacyl-tRNA editing domain
IPNEDICM_00356 1.2e-54 S Abi-like protein
IPNEDICM_00357 8e-224 S SLAP domain
IPNEDICM_00358 3.9e-128 S CAAX protease self-immunity
IPNEDICM_00359 1.3e-277 arlS 2.7.13.3 T Histidine kinase
IPNEDICM_00360 1.2e-126 K response regulator
IPNEDICM_00361 4.7e-97 yceD S Uncharacterized ACR, COG1399
IPNEDICM_00362 1.7e-215 ylbM S Belongs to the UPF0348 family
IPNEDICM_00363 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
IPNEDICM_00364 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
IPNEDICM_00365 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
IPNEDICM_00366 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
IPNEDICM_00367 4.2e-84 yqeG S HAD phosphatase, family IIIA
IPNEDICM_00368 9.2e-201 tnpB L Putative transposase DNA-binding domain
IPNEDICM_00369 6.9e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
IPNEDICM_00370 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
IPNEDICM_00371 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
IPNEDICM_00372 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
IPNEDICM_00373 4e-98 rihB 3.2.2.1 F Nucleoside
IPNEDICM_00374 3.9e-23 S domain protein
IPNEDICM_00375 1.7e-168 V ABC transporter
IPNEDICM_00376 7.7e-39 S Protein of unknown function (DUF3021)
IPNEDICM_00377 4.2e-53 K LytTr DNA-binding domain
IPNEDICM_00380 3e-107 L Transposase
IPNEDICM_00381 1.3e-96 L Transposase
IPNEDICM_00382 1.5e-180 S Domain of unknown function (DUF389)
IPNEDICM_00383 4.3e-75
IPNEDICM_00384 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
IPNEDICM_00385 1.3e-168 dnaI L Primosomal protein DnaI
IPNEDICM_00386 5.1e-251 dnaB L Replication initiation and membrane attachment
IPNEDICM_00387 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IPNEDICM_00388 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
IPNEDICM_00389 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
IPNEDICM_00390 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IPNEDICM_00391 3.5e-25 qmcA O prohibitin homologues
IPNEDICM_00392 7.4e-105 qmcA O prohibitin homologues
IPNEDICM_00393 8e-51 L RelB antitoxin
IPNEDICM_00394 4.5e-188 S Bacteriocin helveticin-J
IPNEDICM_00395 4.4e-283 M Peptidase family M1 domain
IPNEDICM_00396 1.8e-176 S SLAP domain
IPNEDICM_00397 6.9e-218 mepA V MATE efflux family protein
IPNEDICM_00398 1.7e-174 L COG3385 FOG Transposase and inactivated derivatives
IPNEDICM_00399 1.6e-105 tag 3.2.2.20 L glycosylase
IPNEDICM_00400 3.9e-84
IPNEDICM_00401 1.7e-273 S Calcineurin-like phosphoesterase
IPNEDICM_00402 0.0 asnB 6.3.5.4 E Asparagine synthase
IPNEDICM_00403 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
IPNEDICM_00404 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
IPNEDICM_00405 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IPNEDICM_00406 2.1e-103 S Iron-sulfur cluster assembly protein
IPNEDICM_00407 1.5e-230 XK27_04775 S PAS domain
IPNEDICM_00408 1e-210 yttB EGP Major facilitator Superfamily
IPNEDICM_00409 3.4e-140 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_00410 2.2e-246 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
IPNEDICM_00411 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
IPNEDICM_00412 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
IPNEDICM_00414 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
IPNEDICM_00415 6.5e-221 ecsB U ABC transporter
IPNEDICM_00416 5.7e-135 ecsA V ABC transporter, ATP-binding protein
IPNEDICM_00417 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
IPNEDICM_00418 3.9e-25
IPNEDICM_00419 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
IPNEDICM_00420 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
IPNEDICM_00421 1.1e-265
IPNEDICM_00422 2.2e-42 S Domain of unknown function DUF1829
IPNEDICM_00423 1.3e-41 L Transposase
IPNEDICM_00424 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
IPNEDICM_00425 0.0 L AAA domain
IPNEDICM_00426 1e-226 yhaO L Ser Thr phosphatase family protein
IPNEDICM_00427 7.2e-56 yheA S Belongs to the UPF0342 family
IPNEDICM_00428 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
IPNEDICM_00429 4.2e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
IPNEDICM_00430 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
IPNEDICM_00431 3.7e-27 L Transposase
IPNEDICM_00432 7.5e-103 G Phosphoglycerate mutase family
IPNEDICM_00433 7.8e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
IPNEDICM_00435 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
IPNEDICM_00436 4.5e-192 I transferase activity, transferring acyl groups other than amino-acyl groups
IPNEDICM_00437 5.6e-179 S PFAM Archaeal ATPase
IPNEDICM_00438 2.4e-73 S cog cog1373
IPNEDICM_00439 3.7e-27 L Transposase
IPNEDICM_00440 2.4e-128 S cog cog1373
IPNEDICM_00441 1.4e-109 yniG EGP Major facilitator Superfamily
IPNEDICM_00442 5.4e-237 L transposase, IS605 OrfB family
IPNEDICM_00443 4.5e-76 yniG EGP Major facilitator Superfamily
IPNEDICM_00444 4.9e-35
IPNEDICM_00446 1.3e-42
IPNEDICM_00447 1.9e-75 M LysM domain
IPNEDICM_00448 1e-20 S Enterocin A Immunity
IPNEDICM_00450 5.7e-43 2.4.1.33 V HlyD family secretion protein
IPNEDICM_00451 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
IPNEDICM_00452 2.9e-79 K LytTr DNA-binding domain
IPNEDICM_00453 2.1e-78 2.7.13.3 T GHKL domain
IPNEDICM_00455 1.1e-71 2.5.1.74 H UbiA prenyltransferase family
IPNEDICM_00456 7.7e-26
IPNEDICM_00457 5.7e-84 S PFAM Archaeal ATPase
IPNEDICM_00458 2.2e-85 S PFAM Archaeal ATPase
IPNEDICM_00459 4.6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
IPNEDICM_00460 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
IPNEDICM_00461 6.7e-98 M ErfK YbiS YcfS YnhG
IPNEDICM_00462 2.8e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IPNEDICM_00463 1.3e-240 dacA 3.4.16.4 M Belongs to the peptidase S11 family
IPNEDICM_00465 4.7e-46 pspC KT PspC domain
IPNEDICM_00466 3.3e-237 L COG2963 Transposase and inactivated derivatives
IPNEDICM_00467 0.0 pepO 3.4.24.71 O Peptidase family M13
IPNEDICM_00468 1.1e-282 phoR 2.7.13.3 T Histidine kinase
IPNEDICM_00469 9.5e-121 T Transcriptional regulatory protein, C terminal
IPNEDICM_00470 1.4e-105 phoU P Plays a role in the regulation of phosphate uptake
IPNEDICM_00471 1.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
IPNEDICM_00472 1.2e-152 pstA P Phosphate transport system permease protein PstA
IPNEDICM_00473 1.1e-159 pstC P probably responsible for the translocation of the substrate across the membrane
IPNEDICM_00474 4.2e-145 pstS P Phosphate
IPNEDICM_00475 1.3e-30
IPNEDICM_00476 6.3e-192 oppA E ABC transporter, substratebinding protein
IPNEDICM_00477 4.7e-275 ytgP S Polysaccharide biosynthesis protein
IPNEDICM_00478 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
IPNEDICM_00479 1.1e-121 3.6.1.27 I Acid phosphatase homologues
IPNEDICM_00480 2.8e-168 K LysR substrate binding domain
IPNEDICM_00481 2.3e-84 3.6.4.12 S PD-(D/E)XK nuclease family transposase
IPNEDICM_00482 6.2e-43 1.3.5.4 C FAD binding domain
IPNEDICM_00483 2.4e-231 ndh 1.6.99.3 C NADH dehydrogenase
IPNEDICM_00484 1.1e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
IPNEDICM_00485 1.8e-31 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
IPNEDICM_00486 1.3e-131 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
IPNEDICM_00487 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
IPNEDICM_00488 1.9e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
IPNEDICM_00489 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
IPNEDICM_00490 8.2e-177 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
IPNEDICM_00491 6.4e-243 cydA 1.10.3.14 C ubiquinol oxidase
IPNEDICM_00492 7e-23 cydA 1.10.3.14 C ubiquinol oxidase
IPNEDICM_00493 3.7e-130 ybbH_2 K rpiR family
IPNEDICM_00494 3.4e-195 S Bacterial protein of unknown function (DUF871)
IPNEDICM_00495 4.1e-214 2.7.1.208, 2.7.1.211 G phosphotransferase system
IPNEDICM_00496 1.8e-119 S Putative esterase
IPNEDICM_00497 3.6e-120 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
IPNEDICM_00498 1.3e-79 ybbH_2 K Helix-turn-helix domain, rpiR family
IPNEDICM_00499 8.5e-260 qacA EGP Major facilitator Superfamily
IPNEDICM_00500 1.7e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
IPNEDICM_00503 6.2e-165 psaA P Belongs to the bacterial solute-binding protein 9 family
IPNEDICM_00506 2.4e-30 L An automated process has identified a potential problem with this gene model
IPNEDICM_00507 2.1e-135 UW LPXTG-motif cell wall anchor domain protein
IPNEDICM_00508 1.3e-161 UW LPXTG-motif cell wall anchor domain protein
IPNEDICM_00509 3.3e-45 UW LPXTG-motif cell wall anchor domain protein
IPNEDICM_00510 9.1e-10 UW LPXTG-motif cell wall anchor domain protein
IPNEDICM_00511 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
IPNEDICM_00512 7.5e-100 J Acetyltransferase (GNAT) domain
IPNEDICM_00513 1.4e-110 yjbF S SNARE associated Golgi protein
IPNEDICM_00514 6e-151 I alpha/beta hydrolase fold
IPNEDICM_00515 1.4e-156 hipB K Helix-turn-helix
IPNEDICM_00516 1.4e-15 S cog cog1373
IPNEDICM_00517 1e-30 S cog cog1373
IPNEDICM_00518 7.6e-91 F Nucleoside 2-deoxyribosyltransferase
IPNEDICM_00519 3.3e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
IPNEDICM_00520 6.1e-227 L COG3547 Transposase and inactivated derivatives
IPNEDICM_00521 1.8e-163
IPNEDICM_00522 7.8e-26 K Acetyltransferase (GNAT) domain
IPNEDICM_00524 0.0 ydgH S MMPL family
IPNEDICM_00525 6.6e-99 yobS K Bacterial regulatory proteins, tetR family
IPNEDICM_00526 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
IPNEDICM_00527 1.8e-154 corA P CorA-like Mg2+ transporter protein
IPNEDICM_00528 6.7e-240 G Bacterial extracellular solute-binding protein
IPNEDICM_00529 9.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
IPNEDICM_00530 1.8e-145 gtsC P Binding-protein-dependent transport system inner membrane component
IPNEDICM_00531 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
IPNEDICM_00532 1.9e-203 malK P ATPases associated with a variety of cellular activities
IPNEDICM_00533 1.3e-281 pipD E Dipeptidase
IPNEDICM_00534 1.9e-158 endA F DNA RNA non-specific endonuclease
IPNEDICM_00535 8e-182 dnaQ 2.7.7.7 L EXOIII
IPNEDICM_00536 9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
IPNEDICM_00537 3e-116 yviA S Protein of unknown function (DUF421)
IPNEDICM_00538 1.1e-56 S Protein of unknown function (DUF3290)
IPNEDICM_00540 3.8e-139 pnuC H nicotinamide mononucleotide transporter
IPNEDICM_00541 0.0 kup P Transport of potassium into the cell
IPNEDICM_00542 7.3e-74
IPNEDICM_00543 2.1e-45 S PFAM Archaeal ATPase
IPNEDICM_00545 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
IPNEDICM_00546 5.9e-45
IPNEDICM_00547 4e-08
IPNEDICM_00548 6.6e-56
IPNEDICM_00549 2.7e-57
IPNEDICM_00550 1.6e-11
IPNEDICM_00551 8.1e-126 S PAS domain
IPNEDICM_00552 2.9e-277 V ABC transporter transmembrane region
IPNEDICM_00553 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
IPNEDICM_00554 3.1e-130 T Transcriptional regulatory protein, C terminal
IPNEDICM_00555 5.2e-187 T GHKL domain
IPNEDICM_00556 3.4e-76 S Peptidase propeptide and YPEB domain
IPNEDICM_00557 2.5e-72 S Peptidase propeptide and YPEB domain
IPNEDICM_00558 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
IPNEDICM_00559 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
IPNEDICM_00560 7e-68 V ABC transporter transmembrane region
IPNEDICM_00561 9e-161 V ABC transporter transmembrane region
IPNEDICM_00562 2.3e-309 oppA3 E ABC transporter, substratebinding protein
IPNEDICM_00563 2.4e-60 ypaA S Protein of unknown function (DUF1304)
IPNEDICM_00564 2.1e-28 S Peptidase propeptide and YPEB domain
IPNEDICM_00565 7.1e-237 L transposase, IS605 OrfB family
IPNEDICM_00566 8.8e-58 S Peptidase propeptide and YPEB domain
IPNEDICM_00567 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IPNEDICM_00568 2.5e-169 coaA 2.7.1.33 F Pantothenic acid kinase
IPNEDICM_00569 7.1e-98 E GDSL-like Lipase/Acylhydrolase
IPNEDICM_00570 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
IPNEDICM_00571 1.6e-143 aatB ET ABC transporter substrate-binding protein
IPNEDICM_00572 1e-105 glnQ 3.6.3.21 E ABC transporter
IPNEDICM_00573 1.5e-107 glnP P ABC transporter permease
IPNEDICM_00574 0.0 helD 3.6.4.12 L DNA helicase
IPNEDICM_00575 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
IPNEDICM_00576 1.4e-126 pgm3 G Phosphoglycerate mutase family
IPNEDICM_00577 3.7e-27 L Transposase
IPNEDICM_00578 1.2e-241 S response to antibiotic
IPNEDICM_00579 4.9e-125
IPNEDICM_00580 0.0 3.6.3.8 P P-type ATPase
IPNEDICM_00581 8.7e-66 2.7.1.191 G PTS system fructose IIA component
IPNEDICM_00582 4.4e-43
IPNEDICM_00583 5.9e-09
IPNEDICM_00584 9.4e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
IPNEDICM_00585 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
IPNEDICM_00586 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
IPNEDICM_00587 3.7e-27 L Transposase
IPNEDICM_00588 5.2e-104
IPNEDICM_00591 1.7e-257 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
IPNEDICM_00592 2.6e-208 glf 5.4.99.9 M UDP-galactopyranose mutase
IPNEDICM_00595 1.9e-117 cps1D M Domain of unknown function (DUF4422)
IPNEDICM_00596 6.7e-110 rfbP M Bacterial sugar transferase
IPNEDICM_00597 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
IPNEDICM_00598 1.3e-121 ywqD 2.7.10.1 D Capsular exopolysaccharide family
IPNEDICM_00599 6.5e-146 epsB M biosynthesis protein
IPNEDICM_00600 1.9e-176 brpA K Cell envelope-like function transcriptional attenuator common domain protein
IPNEDICM_00602 3.8e-216 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IPNEDICM_00603 3.5e-175 S Cysteine-rich secretory protein family
IPNEDICM_00604 1.6e-41
IPNEDICM_00605 2.6e-118 M NlpC/P60 family
IPNEDICM_00606 1.4e-136 M NlpC P60 family protein
IPNEDICM_00607 5e-88 M NlpC/P60 family
IPNEDICM_00608 2.2e-88 gmk2 2.7.4.8 F Guanylate kinase homologues.
IPNEDICM_00609 3.9e-42
IPNEDICM_00610 1.7e-279 S O-antigen ligase like membrane protein
IPNEDICM_00611 3.3e-112
IPNEDICM_00612 4.7e-221 tnpB L Putative transposase DNA-binding domain
IPNEDICM_00613 5.5e-77 nrdI F NrdI Flavodoxin like
IPNEDICM_00614 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IPNEDICM_00615 2.5e-68
IPNEDICM_00617 5.5e-30
IPNEDICM_00618 4.3e-40 S Protein of unknown function (DUF2922)
IPNEDICM_00619 8.3e-100 S SLAP domain
IPNEDICM_00620 6.7e-19 3.6.4.12 S PD-(D/E)XK nuclease family transposase
IPNEDICM_00622 2.1e-144 3.6.4.12 S PD-(D/E)XK nuclease family transposase
IPNEDICM_00623 9.1e-26
IPNEDICM_00624 9.1e-112 yvpB S Peptidase_C39 like family
IPNEDICM_00625 1.1e-83 S Threonine/Serine exporter, ThrE
IPNEDICM_00626 2.4e-136 thrE S Putative threonine/serine exporter
IPNEDICM_00627 8.9e-292 S ABC transporter
IPNEDICM_00628 8.3e-58
IPNEDICM_00629 5e-72 rimL J Acetyltransferase (GNAT) domain
IPNEDICM_00630 1.4e-34
IPNEDICM_00631 1.2e-30
IPNEDICM_00632 1.8e-111 S Protein of unknown function (DUF554)
IPNEDICM_00633 8.7e-197 brpA K Cell envelope-like function transcriptional attenuator common domain protein
IPNEDICM_00634 0.0 pepF E oligoendopeptidase F
IPNEDICM_00635 2.9e-31
IPNEDICM_00636 1.3e-69 doc S Prophage maintenance system killer protein
IPNEDICM_00639 4.6e-27 S Enterocin A Immunity
IPNEDICM_00640 1.7e-22 blpT
IPNEDICM_00642 1.6e-25 K Helix-turn-helix XRE-family like proteins
IPNEDICM_00643 1.2e-11
IPNEDICM_00644 1.5e-216 2.1.1.14 E methionine synthase, vitamin-B12 independent
IPNEDICM_00645 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
IPNEDICM_00646 2e-264 lctP C L-lactate permease
IPNEDICM_00647 5e-129 znuB U ABC 3 transport family
IPNEDICM_00648 1.6e-117 fhuC P ABC transporter
IPNEDICM_00649 1.6e-147 psaA P Belongs to the bacterial solute-binding protein 9 family
IPNEDICM_00650 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
IPNEDICM_00651 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
IPNEDICM_00652 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
IPNEDICM_00653 1.8e-136 fruR K DeoR C terminal sensor domain
IPNEDICM_00654 1.8e-218 natB CP ABC-2 family transporter protein
IPNEDICM_00655 1.1e-164 natA S ABC transporter, ATP-binding protein
IPNEDICM_00656 1.7e-67
IPNEDICM_00657 2e-23
IPNEDICM_00658 8.2e-31 yozG K Transcriptional regulator
IPNEDICM_00659 3.7e-83
IPNEDICM_00660 3e-21
IPNEDICM_00663 3.4e-140 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_00664 6.1e-269 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
IPNEDICM_00665 1.2e-127 K LytTr DNA-binding domain
IPNEDICM_00666 1.6e-132 2.7.13.3 T GHKL domain
IPNEDICM_00667 3.7e-27 L Transposase
IPNEDICM_00668 1.2e-16
IPNEDICM_00669 2.1e-255 S Archaea bacterial proteins of unknown function
IPNEDICM_00670 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
IPNEDICM_00671 3e-270 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
IPNEDICM_00672 1e-24
IPNEDICM_00673 9.5e-26
IPNEDICM_00674 2.5e-33
IPNEDICM_00675 1.4e-53 S Enterocin A Immunity
IPNEDICM_00676 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
IPNEDICM_00677 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
IPNEDICM_00678 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
IPNEDICM_00679 9.6e-121 K response regulator
IPNEDICM_00681 0.0 V ABC transporter
IPNEDICM_00682 4.2e-144 V ABC transporter, ATP-binding protein
IPNEDICM_00683 1.2e-145 V ABC transporter, ATP-binding protein
IPNEDICM_00684 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
IPNEDICM_00685 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
IPNEDICM_00686 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
IPNEDICM_00687 8.5e-154 spo0J K Belongs to the ParB family
IPNEDICM_00688 3.4e-138 soj D Sporulation initiation inhibitor
IPNEDICM_00689 1.5e-147 noc K Belongs to the ParB family
IPNEDICM_00690 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
IPNEDICM_00691 3e-53 cvpA S Colicin V production protein
IPNEDICM_00693 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
IPNEDICM_00694 6e-151 3.1.3.48 T Tyrosine phosphatase family
IPNEDICM_00695 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
IPNEDICM_00696 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
IPNEDICM_00697 2.4e-110 K WHG domain
IPNEDICM_00698 3e-37
IPNEDICM_00699 2.9e-131 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_00700 1.3e-273 pipD E Dipeptidase
IPNEDICM_00701 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
IPNEDICM_00702 3.3e-176 hrtB V ABC transporter permease
IPNEDICM_00703 3.2e-92 ygfC K Bacterial regulatory proteins, tetR family
IPNEDICM_00704 3.5e-111 G phosphoglycerate mutase
IPNEDICM_00705 4.1e-141 aroD S Alpha/beta hydrolase family
IPNEDICM_00706 2.2e-142 S Belongs to the UPF0246 family
IPNEDICM_00707 9e-121
IPNEDICM_00708 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
IPNEDICM_00709 3.9e-186 S Putative peptidoglycan binding domain
IPNEDICM_00710 4e-16
IPNEDICM_00711 2.1e-92 liaI S membrane
IPNEDICM_00712 6.6e-70 XK27_02470 K LytTr DNA-binding domain
IPNEDICM_00713 1.2e-18 S Sugar efflux transporter for intercellular exchange
IPNEDICM_00714 1.3e-250 dtpT U amino acid peptide transporter
IPNEDICM_00715 0.0 pepN 3.4.11.2 E aminopeptidase
IPNEDICM_00716 1.8e-46 lysM M LysM domain
IPNEDICM_00717 1.3e-174
IPNEDICM_00718 1.7e-152 mdtG EGP Major facilitator Superfamily
IPNEDICM_00719 6.9e-47 mdtG EGP Major facilitator Superfamily
IPNEDICM_00720 1.7e-90 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_00721 4.6e-88 ymdB S Macro domain protein
IPNEDICM_00723 4.8e-28
IPNEDICM_00726 4.3e-67 K Helix-turn-helix XRE-family like proteins
IPNEDICM_00727 3.3e-147 malG P ABC transporter permease
IPNEDICM_00728 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
IPNEDICM_00729 1.3e-213 malE G Bacterial extracellular solute-binding protein
IPNEDICM_00730 6.8e-209 msmX P Belongs to the ABC transporter superfamily
IPNEDICM_00731 9e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
IPNEDICM_00732 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
IPNEDICM_00733 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
IPNEDICM_00734 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
IPNEDICM_00735 0.0 fhaB M Rib/alpha-like repeat
IPNEDICM_00736 3.4e-140 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_00737 8.2e-179 yvdE K helix_turn _helix lactose operon repressor
IPNEDICM_00738 4.1e-36 ptp2 3.1.3.48 T Tyrosine phosphatase family
IPNEDICM_00739 4.1e-101 ptp2 3.1.3.48 T Tyrosine phosphatase family
IPNEDICM_00740 5.1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IPNEDICM_00741 1.5e-144 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
IPNEDICM_00742 1.7e-184 G Transmembrane secretion effector
IPNEDICM_00743 6.1e-136 V ABC transporter transmembrane region
IPNEDICM_00744 2.9e-224 L transposase, IS605 OrfB family
IPNEDICM_00745 1.1e-75 V ABC transporter transmembrane region
IPNEDICM_00746 6.5e-64 L RelB antitoxin
IPNEDICM_00747 2.1e-131 cobQ S glutamine amidotransferase
IPNEDICM_00748 1.8e-81 M NlpC/P60 family
IPNEDICM_00751 2.6e-155
IPNEDICM_00752 7.8e-38
IPNEDICM_00753 2e-32
IPNEDICM_00754 6.2e-163 EG EamA-like transporter family
IPNEDICM_00755 5e-165 EG EamA-like transporter family
IPNEDICM_00756 1.2e-139 yicL EG EamA-like transporter family
IPNEDICM_00757 4.3e-107
IPNEDICM_00758 1.1e-110
IPNEDICM_00759 5.8e-186 XK27_05540 S DUF218 domain
IPNEDICM_00760 9.3e-264 yheS_2 S ATPases associated with a variety of cellular activities
IPNEDICM_00761 4.7e-85
IPNEDICM_00762 3.9e-57
IPNEDICM_00763 4.7e-25 S Protein conserved in bacteria
IPNEDICM_00764 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
IPNEDICM_00765 7.7e-29 hicA S HicA toxin of bacterial toxin-antitoxin,
IPNEDICM_00767 5.3e-41
IPNEDICM_00768 1.4e-76 K DNA-templated transcription, initiation
IPNEDICM_00769 6.2e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IPNEDICM_00770 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IPNEDICM_00771 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
IPNEDICM_00774 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
IPNEDICM_00775 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
IPNEDICM_00776 1.8e-230 steT_1 E amino acid
IPNEDICM_00777 2.2e-139 puuD S peptidase C26
IPNEDICM_00779 2e-135 V HNH endonuclease
IPNEDICM_00780 6.4e-135 S PFAM Archaeal ATPase
IPNEDICM_00781 9.2e-248 yifK E Amino acid permease
IPNEDICM_00782 9.7e-234 cycA E Amino acid permease
IPNEDICM_00783 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
IPNEDICM_00784 0.0 clpE O AAA domain (Cdc48 subfamily)
IPNEDICM_00785 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
IPNEDICM_00786 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IPNEDICM_00787 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
IPNEDICM_00788 0.0 XK27_06780 V ABC transporter permease
IPNEDICM_00789 1.9e-36
IPNEDICM_00790 1.5e-289 ytgP S Polysaccharide biosynthesis protein
IPNEDICM_00791 2.7e-137 lysA2 M Glycosyl hydrolases family 25
IPNEDICM_00792 2.3e-133 S Protein of unknown function (DUF975)
IPNEDICM_00793 7.6e-177 pbpX2 V Beta-lactamase
IPNEDICM_00794 7.3e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
IPNEDICM_00795 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
IPNEDICM_00796 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
IPNEDICM_00797 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
IPNEDICM_00798 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
IPNEDICM_00799 4.1e-44
IPNEDICM_00800 1e-207 ywhK S Membrane
IPNEDICM_00801 1.5e-80 ykuL S (CBS) domain
IPNEDICM_00802 0.0 cadA P P-type ATPase
IPNEDICM_00803 2.8e-205 napA P Sodium/hydrogen exchanger family
IPNEDICM_00804 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
IPNEDICM_00805 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
IPNEDICM_00806 4.1e-276 V ABC transporter transmembrane region
IPNEDICM_00807 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
IPNEDICM_00808 5.4e-51
IPNEDICM_00809 4.2e-154 EGP Major facilitator Superfamily
IPNEDICM_00810 3e-111 ropB K Transcriptional regulator
IPNEDICM_00811 2.7e-120 S CAAX protease self-immunity
IPNEDICM_00812 1.6e-194 S DUF218 domain
IPNEDICM_00813 0.0 macB_3 V ABC transporter, ATP-binding protein
IPNEDICM_00814 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
IPNEDICM_00815 2.8e-100 S ECF transporter, substrate-specific component
IPNEDICM_00816 3.9e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
IPNEDICM_00817 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
IPNEDICM_00818 1.3e-282 xylG 3.6.3.17 S ABC transporter
IPNEDICM_00819 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
IPNEDICM_00820 2.2e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
IPNEDICM_00821 3.7e-159 yeaE S Aldo/keto reductase family
IPNEDICM_00822 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
IPNEDICM_00823 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
IPNEDICM_00824 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
IPNEDICM_00825 9.4e-72
IPNEDICM_00826 8.2e-140 cof S haloacid dehalogenase-like hydrolase
IPNEDICM_00827 8.2e-230 pbuG S permease
IPNEDICM_00828 2.1e-76 S ABC-2 family transporter protein
IPNEDICM_00829 4.7e-60 S ABC-2 family transporter protein
IPNEDICM_00830 1.4e-72 V ABC transporter, ATP-binding protein
IPNEDICM_00831 3.3e-37
IPNEDICM_00832 2.5e-119 K helix_turn_helix, mercury resistance
IPNEDICM_00833 7.5e-231 pbuG S permease
IPNEDICM_00834 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
IPNEDICM_00835 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
IPNEDICM_00836 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
IPNEDICM_00838 1.9e-83 K Transcriptional regulator
IPNEDICM_00839 6.1e-61 K Transcriptional regulator
IPNEDICM_00840 3.2e-203 S cog cog1373
IPNEDICM_00841 9.7e-146 S haloacid dehalogenase-like hydrolase
IPNEDICM_00842 2.5e-226 pbuG S permease
IPNEDICM_00843 1.3e-41 L Transposase
IPNEDICM_00844 1.4e-37 S Putative adhesin
IPNEDICM_00845 2.6e-151 V ABC transporter transmembrane region
IPNEDICM_00846 4.6e-138
IPNEDICM_00847 1.8e-31
IPNEDICM_00850 2.4e-36
IPNEDICM_00851 9.2e-57 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
IPNEDICM_00852 1.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
IPNEDICM_00853 0.0 copA 3.6.3.54 P P-type ATPase
IPNEDICM_00854 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
IPNEDICM_00855 1.2e-105
IPNEDICM_00856 7e-248 EGP Sugar (and other) transporter
IPNEDICM_00857 1.2e-18
IPNEDICM_00858 2.8e-210
IPNEDICM_00859 5.2e-91 S SLAP domain
IPNEDICM_00860 1.2e-28 S SLAP domain
IPNEDICM_00861 1.3e-117 S SLAP domain
IPNEDICM_00862 1.1e-106 S Bacteriocin helveticin-J
IPNEDICM_00863 1.2e-44
IPNEDICM_00864 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
IPNEDICM_00865 4e-32 E Zn peptidase
IPNEDICM_00866 3.9e-287 clcA P chloride
IPNEDICM_00867 6.2e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
IPNEDICM_00868 9.5e-31
IPNEDICM_00869 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
IPNEDICM_00870 6.3e-132 S SLAP domain
IPNEDICM_00872 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
IPNEDICM_00873 6.5e-180 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
IPNEDICM_00874 0.0 yjbQ P TrkA C-terminal domain protein
IPNEDICM_00875 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
IPNEDICM_00876 2.1e-161 S Oxidoreductase family, NAD-binding Rossmann fold
IPNEDICM_00877 2.8e-12
IPNEDICM_00878 9.6e-184 L DDE superfamily endonuclease
IPNEDICM_00879 3.8e-15 S Domain of Unknown Function with PDB structure (DUF3850)
IPNEDICM_00881 2.9e-12
IPNEDICM_00882 2e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
IPNEDICM_00883 2.9e-174 L Bifunctional protein
IPNEDICM_00884 1.4e-100
IPNEDICM_00885 2.1e-116
IPNEDICM_00886 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IPNEDICM_00887 1.4e-98 G Aldose 1-epimerase
IPNEDICM_00888 2.7e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
IPNEDICM_00889 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
IPNEDICM_00890 0.0 XK27_08315 M Sulfatase
IPNEDICM_00891 8.4e-265 S Fibronectin type III domain
IPNEDICM_00892 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
IPNEDICM_00893 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
IPNEDICM_00894 5.7e-69 rplI J Binds to the 23S rRNA
IPNEDICM_00895 1.9e-253 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
IPNEDICM_00896 3.4e-53
IPNEDICM_00898 4.6e-257 pepC 3.4.22.40 E aminopeptidase
IPNEDICM_00899 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
IPNEDICM_00900 1.7e-301 oppA E ABC transporter, substratebinding protein
IPNEDICM_00901 1.6e-310 oppA E ABC transporter, substratebinding protein
IPNEDICM_00902 1.4e-39 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_00903 3.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
IPNEDICM_00904 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
IPNEDICM_00905 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
IPNEDICM_00906 2.7e-199 oppD P Belongs to the ABC transporter superfamily
IPNEDICM_00907 1.9e-175 oppF P Belongs to the ABC transporter superfamily
IPNEDICM_00908 1.4e-256 pepC 3.4.22.40 E aminopeptidase
IPNEDICM_00909 3.9e-72 hsp O Belongs to the small heat shock protein (HSP20) family
IPNEDICM_00910 1.3e-28 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
IPNEDICM_00911 6e-112
IPNEDICM_00913 3.9e-110 E Belongs to the SOS response-associated peptidase family
IPNEDICM_00914 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
IPNEDICM_00915 4e-89 comEB 3.5.4.12 F MafB19-like deaminase
IPNEDICM_00916 2e-103 S TPM domain
IPNEDICM_00917 2.4e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
IPNEDICM_00918 2.5e-311 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
IPNEDICM_00919 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IPNEDICM_00920 1e-147 tatD L hydrolase, TatD family
IPNEDICM_00921 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
IPNEDICM_00922 6.7e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
IPNEDICM_00923 4.5e-39 veg S Biofilm formation stimulator VEG
IPNEDICM_00924 1.5e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
IPNEDICM_00925 2.6e-173 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
IPNEDICM_00926 5.3e-80
IPNEDICM_00927 7.8e-292 S SLAP domain
IPNEDICM_00928 6e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IPNEDICM_00932 4.2e-172 2.7.1.2 GK ROK family
IPNEDICM_00933 5.6e-43
IPNEDICM_00934 3.6e-268 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
IPNEDICM_00935 3.7e-30 S Fic/DOC family
IPNEDICM_00936 1.7e-87 L Transposase
IPNEDICM_00937 7.8e-73 L Transposase
IPNEDICM_00938 2.9e-97 D VirC1 protein
IPNEDICM_00940 1.7e-39 relB L RelB antitoxin
IPNEDICM_00941 1.6e-35 S Bacterial toxin of type II toxin-antitoxin system, YafQ
IPNEDICM_00942 6.5e-82 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
IPNEDICM_00943 1.3e-240 V N-6 DNA Methylase
IPNEDICM_00944 7.9e-16 L An automated process has identified a potential problem with this gene model
IPNEDICM_00945 9.4e-51 L An automated process has identified a potential problem with this gene model
IPNEDICM_00947 1e-66 doc S Fic/DOC family
IPNEDICM_00948 4.1e-34
IPNEDICM_00950 1.1e-23 S CAAX protease self-immunity
IPNEDICM_00951 3.4e-134 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
IPNEDICM_00953 9.6e-18 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
IPNEDICM_00954 3.4e-24 relB L Addiction module antitoxin, RelB DinJ family
IPNEDICM_00955 1.9e-47 L Psort location Cytoplasmic, score
IPNEDICM_00956 1e-18 L Psort location Cytoplasmic, score
IPNEDICM_00957 2.5e-38 L Protein of unknown function (DUF3991)
IPNEDICM_00958 1.2e-52 S COG0790 FOG TPR repeat, SEL1 subfamily
IPNEDICM_00960 2.7e-141 L An automated process has identified a potential problem with this gene model
IPNEDICM_00961 3.7e-27 L Transposase
IPNEDICM_00963 2.2e-129 blpT
IPNEDICM_00964 1.4e-107 M Transport protein ComB
IPNEDICM_00965 9.3e-116 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
IPNEDICM_00966 6.9e-69 S Domain of unknown function (DUF1934)
IPNEDICM_00967 1.5e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
IPNEDICM_00968 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
IPNEDICM_00969 9.6e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IPNEDICM_00970 1.8e-74 K acetyltransferase
IPNEDICM_00971 6.3e-284 pipD E Dipeptidase
IPNEDICM_00972 3.7e-156 msmR K AraC-like ligand binding domain
IPNEDICM_00973 6.4e-146 pbuX F xanthine permease
IPNEDICM_00974 5.6e-56 pbuX F xanthine permease
IPNEDICM_00975 9e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
IPNEDICM_00976 2.4e-43 K Helix-turn-helix
IPNEDICM_00977 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
IPNEDICM_00979 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IPNEDICM_00980 3.6e-225 3.2.1.18 GH33 M Rib/alpha-like repeat
IPNEDICM_00981 6.7e-76 S Fic/DOC family
IPNEDICM_00982 1.9e-166 repA S Replication initiator protein A
IPNEDICM_00983 1.7e-142 soj D AAA domain
IPNEDICM_00984 1.3e-28
IPNEDICM_00985 1.1e-76 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IPNEDICM_00986 4.7e-70 L IS1381, transposase OrfA
IPNEDICM_00987 1.1e-109 tnpR1 L Resolvase, N terminal domain
IPNEDICM_00988 3.6e-193 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IPNEDICM_00989 9.3e-74 nrdI F NrdI Flavodoxin like
IPNEDICM_00990 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IPNEDICM_00991 1.9e-19 L Replication initiation factor
IPNEDICM_00994 1.3e-30
IPNEDICM_00995 3.6e-69 T Toxin-antitoxin system, toxin component, MazF family
IPNEDICM_00996 3.7e-102 L Integrase
IPNEDICM_00997 7.8e-73 L Transposase
IPNEDICM_00998 1.3e-141 yfeO P Voltage gated chloride channel
IPNEDICM_00999 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
IPNEDICM_01000 1.4e-51
IPNEDICM_01001 2.1e-42
IPNEDICM_01002 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IPNEDICM_01003 9.5e-297 ybeC E amino acid
IPNEDICM_01004 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
IPNEDICM_01005 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
IPNEDICM_01006 2.5e-39 rpmE2 J Ribosomal protein L31
IPNEDICM_01007 1.2e-258 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
IPNEDICM_01008 4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
IPNEDICM_01009 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
IPNEDICM_01010 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IPNEDICM_01011 2.9e-247 mntH P H( )-stimulated, divalent metal cation uptake system
IPNEDICM_01012 5.3e-45 yitW S Iron-sulfur cluster assembly protein
IPNEDICM_01013 2e-266 sufB O assembly protein SufB
IPNEDICM_01014 2.4e-59 nifU C SUF system FeS assembly protein, NifU family
IPNEDICM_01015 5.3e-178 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IPNEDICM_01016 3.5e-174 sufD O FeS assembly protein SufD
IPNEDICM_01017 2.8e-140 sufC O FeS assembly ATPase SufC
IPNEDICM_01018 1.2e-39 C 2Fe-2S iron-sulfur cluster binding domain
IPNEDICM_01020 4.2e-35 radC L DNA repair protein
IPNEDICM_01027 5.6e-17
IPNEDICM_01031 8.3e-32 dnaG L DNA primase activity
IPNEDICM_01032 1.9e-85 3.4.22.70 M sortase family
IPNEDICM_01039 8.3e-74
IPNEDICM_01041 1.5e-227 3.2.1.97 GH101 M Psort location Cellwall, score
IPNEDICM_01042 2.5e-38 S SLAP domain
IPNEDICM_01044 4.5e-121 G Peptidase_C39 like family
IPNEDICM_01045 8.9e-177 M NlpC/P60 family
IPNEDICM_01047 1.6e-17
IPNEDICM_01050 5.4e-84 D CobQ CobB MinD ParA nucleotide binding domain protein
IPNEDICM_01052 8.4e-91
IPNEDICM_01055 6.7e-149 U TraM recognition site of TraD and TraG
IPNEDICM_01056 2.4e-212 L Putative transposase DNA-binding domain
IPNEDICM_01061 2.8e-31 repA S Replication initiator protein A
IPNEDICM_01063 1.9e-33
IPNEDICM_01067 1.4e-53 M CHAP domain
IPNEDICM_01069 1.1e-180 S regulation of response to stimulus
IPNEDICM_01073 6.3e-50 lepB 3.4.21.89 U Belongs to the peptidase S26 family
IPNEDICM_01077 5.9e-69 L Initiator Replication protein
IPNEDICM_01078 1.1e-84 endA F DNA RNA non-specific endonuclease
IPNEDICM_01084 1.6e-13
IPNEDICM_01085 1.1e-262 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
IPNEDICM_01087 7e-42
IPNEDICM_01088 7.2e-27 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
IPNEDICM_01090 8e-260 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
IPNEDICM_01097 1.1e-182 L transposase, IS605 OrfB family
IPNEDICM_01098 1.4e-13
IPNEDICM_01099 9.4e-19
IPNEDICM_01101 2.1e-13
IPNEDICM_01106 3.4e-74 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
IPNEDICM_01107 4.7e-58 yxeH S hydrolase
IPNEDICM_01108 5.4e-62 farR K Helix-turn-helix domain
IPNEDICM_01109 3.2e-113 gatY G Fructose-bisphosphate aldolase class-II
IPNEDICM_01110 9.5e-35 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
IPNEDICM_01111 1e-21 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
IPNEDICM_01112 2.6e-178 gatC G PTS system sugar-specific permease component
IPNEDICM_01113 4.4e-99 rhaB 2.7.1.12, 2.7.1.17, 2.7.1.5 G FGGY family of carbohydrate kinases, C-terminal domain
IPNEDICM_01114 1.6e-176 L transposase, IS605 OrfB family
IPNEDICM_01116 0.0 res 3.1.21.5 L Type III restriction enzyme, res subunit
IPNEDICM_01117 2.5e-224 mod 2.1.1.72 L DNA methylase
IPNEDICM_01118 1e-22
IPNEDICM_01121 1e-35 ftsH1 O AAA ATPase central domain protein
IPNEDICM_01122 2.8e-87 L Integrase
IPNEDICM_01125 3.4e-65
IPNEDICM_01128 8.1e-121 U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
IPNEDICM_01129 5.7e-256 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
IPNEDICM_01132 5.5e-08
IPNEDICM_01133 2.6e-38 mltD CBM50 M NlpC/P60 family
IPNEDICM_01139 4.9e-50 xerD L Phage integrase, N-terminal SAM-like domain
IPNEDICM_01140 5.2e-83 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IPNEDICM_01141 4.4e-08 lapA Q Transposase
IPNEDICM_01154 2.2e-128 S (CBS) domain
IPNEDICM_01155 9.6e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
IPNEDICM_01156 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
IPNEDICM_01157 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IPNEDICM_01158 1.6e-33 yabO J S4 domain protein
IPNEDICM_01159 6.8e-60 divIC D Septum formation initiator
IPNEDICM_01160 1.8e-62 yabR J S1 RNA binding domain
IPNEDICM_01161 2.6e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
IPNEDICM_01162 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IPNEDICM_01163 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
IPNEDICM_01164 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IPNEDICM_01165 1.1e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
IPNEDICM_01166 1.4e-83 K FR47-like protein
IPNEDICM_01167 1.6e-08
IPNEDICM_01168 1.6e-08
IPNEDICM_01169 1.6e-08
IPNEDICM_01171 3.5e-70 yebR 1.8.4.14 T GAF domain-containing protein
IPNEDICM_01172 3e-270 L Transposase DDE domain
IPNEDICM_01174 5.7e-37 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
IPNEDICM_01176 9.8e-156 KL domain protein
IPNEDICM_01177 3.9e-26 sip M LysM domain protein
IPNEDICM_01178 4e-126 xerS L Belongs to the 'phage' integrase family
IPNEDICM_01181 1.8e-33 K peptidyl-tyrosine sulfation
IPNEDICM_01182 1.7e-15
IPNEDICM_01183 4.1e-36 S Protein of unknown function (DUF3990)
IPNEDICM_01188 1.5e-35 S Domain of unknown function (DUF4160)
IPNEDICM_01189 7e-38
IPNEDICM_01191 1.6e-66
IPNEDICM_01198 1.2e-25 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
IPNEDICM_01204 8.9e-101
IPNEDICM_01205 1.3e-283 U Psort location Cytoplasmic, score
IPNEDICM_01206 5.8e-112
IPNEDICM_01213 2e-13
IPNEDICM_01215 5.1e-106 fabK 1.3.1.9 S Nitronate monooxygenase
IPNEDICM_01216 1.6e-82 2.8.3.1 I Coenzyme A transferase
IPNEDICM_01217 5.8e-151 2.8.3.1 I Coenzyme A transferase
IPNEDICM_01218 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
IPNEDICM_01219 1.5e-54 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
IPNEDICM_01220 3.2e-75 S ECF transporter, substrate-specific component
IPNEDICM_01221 3.8e-80 coaA 2.7.1.33 F Pantothenic acid kinase
IPNEDICM_01222 1.4e-31 O OsmC-like protein
IPNEDICM_01224 1.5e-36 oppA E ABC transporter substrate-binding protein
IPNEDICM_01225 4e-60 L Resolvase, N terminal domain
IPNEDICM_01226 8.7e-26 dnaQ 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
IPNEDICM_01227 2.9e-96 L Transposase
IPNEDICM_01228 6.1e-54 L Transposase
IPNEDICM_01229 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
IPNEDICM_01230 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IPNEDICM_01231 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IPNEDICM_01232 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
IPNEDICM_01233 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
IPNEDICM_01234 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
IPNEDICM_01235 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
IPNEDICM_01236 7.3e-211 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
IPNEDICM_01237 1.9e-89 ydiM G Major facilitator superfamily
IPNEDICM_01238 1.8e-79
IPNEDICM_01239 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
IPNEDICM_01240 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
IPNEDICM_01241 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
IPNEDICM_01242 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
IPNEDICM_01243 3.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
IPNEDICM_01244 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
IPNEDICM_01245 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
IPNEDICM_01246 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
IPNEDICM_01247 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
IPNEDICM_01248 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
IPNEDICM_01249 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
IPNEDICM_01250 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
IPNEDICM_01251 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
IPNEDICM_01252 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
IPNEDICM_01253 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IPNEDICM_01254 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
IPNEDICM_01255 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
IPNEDICM_01256 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
IPNEDICM_01257 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
IPNEDICM_01258 2.3e-24 rpmD J Ribosomal protein L30
IPNEDICM_01259 1.3e-70 rplO J Binds to the 23S rRNA
IPNEDICM_01260 1.4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
IPNEDICM_01261 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
IPNEDICM_01262 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
IPNEDICM_01263 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
IPNEDICM_01264 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
IPNEDICM_01265 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
IPNEDICM_01266 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IPNEDICM_01267 1.4e-60 rplQ J Ribosomal protein L17
IPNEDICM_01268 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IPNEDICM_01269 3.5e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IPNEDICM_01270 8.5e-137 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IPNEDICM_01271 4.8e-148 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
IPNEDICM_01272 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IPNEDICM_01273 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
IPNEDICM_01274 3.6e-183 L Phage integrase family
IPNEDICM_01275 4.1e-93 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_01276 1.6e-77 ybhL S Belongs to the BI1 family
IPNEDICM_01277 1.8e-81 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
IPNEDICM_01278 3.7e-92 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
IPNEDICM_01279 3e-130 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IPNEDICM_01280 1.1e-39 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IPNEDICM_01281 4e-40 S CRISPR-associated protein (Cas_Csn2)
IPNEDICM_01282 3.3e-127 L PFAM transposase IS116 IS110 IS902
IPNEDICM_01283 4.5e-35 S O-antigen ligase like membrane protein
IPNEDICM_01284 1.1e-81 glfT1 1.1.1.133 S Glycosyltransferase, group 2 family protein
IPNEDICM_01285 5.3e-76 M Glycosyltransferase, group 1 family protein
IPNEDICM_01286 1.7e-42 M Glycosyl transferase family 2
IPNEDICM_01287 8.7e-64 K Helix-turn-helix domain
IPNEDICM_01288 4.9e-111 K Helix-turn-helix XRE-family like proteins
IPNEDICM_01291 8.8e-29
IPNEDICM_01292 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
IPNEDICM_01293 3.3e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
IPNEDICM_01294 6e-132 S membrane transporter protein
IPNEDICM_01295 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
IPNEDICM_01296 7.3e-161 czcD P cation diffusion facilitator family transporter
IPNEDICM_01297 1.4e-23
IPNEDICM_01298 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IPNEDICM_01299 5.4e-183 S AAA domain
IPNEDICM_01300 7.3e-44
IPNEDICM_01301 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
IPNEDICM_01302 4.1e-52
IPNEDICM_01303 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
IPNEDICM_01304 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
IPNEDICM_01305 1.6e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IPNEDICM_01306 7.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
IPNEDICM_01307 5.1e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
IPNEDICM_01308 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IPNEDICM_01309 1.2e-94 sigH K Belongs to the sigma-70 factor family
IPNEDICM_01310 1.7e-34
IPNEDICM_01311 8.4e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
IPNEDICM_01312 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
IPNEDICM_01313 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
IPNEDICM_01314 1.2e-100 nusG K Participates in transcription elongation, termination and antitermination
IPNEDICM_01315 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
IPNEDICM_01316 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
IPNEDICM_01317 2.8e-157 pstS P Phosphate
IPNEDICM_01318 1.9e-162 pstC P probably responsible for the translocation of the substrate across the membrane
IPNEDICM_01319 6.5e-154 pstA P Phosphate transport system permease protein PstA
IPNEDICM_01320 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
IPNEDICM_01321 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
IPNEDICM_01322 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
IPNEDICM_01323 1.2e-47 L Transposase, IS116 IS110 IS902 family
IPNEDICM_01324 2.2e-22
IPNEDICM_01325 1.2e-139 repB EP Plasmid replication protein
IPNEDICM_01326 1e-78 S helix_turn_helix, Deoxyribose operon repressor
IPNEDICM_01327 3.7e-27 L Transposase
IPNEDICM_01329 1.9e-19
IPNEDICM_01330 2.5e-264 3.6.3.6 P Cation transporter/ATPase, N-terminus
IPNEDICM_01331 4.4e-35 3.6.3.2, 3.6.3.6 P cation transport ATPase
IPNEDICM_01332 7.8e-10 3.6.3.2, 3.6.3.6 P cation transport ATPase
IPNEDICM_01333 3.3e-164 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
IPNEDICM_01334 5.2e-170 degV S DegV family
IPNEDICM_01335 1.1e-135 V ABC transporter transmembrane region
IPNEDICM_01336 1.8e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
IPNEDICM_01338 1.4e-16
IPNEDICM_01339 1.5e-11 GT2,GT4 M family 8
IPNEDICM_01340 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
IPNEDICM_01341 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
IPNEDICM_01342 8.7e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
IPNEDICM_01343 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
IPNEDICM_01344 9e-26
IPNEDICM_01345 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
IPNEDICM_01346 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IPNEDICM_01347 5.7e-106 2.4.1.58 GT8 M family 8
IPNEDICM_01348 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
IPNEDICM_01349 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
IPNEDICM_01350 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
IPNEDICM_01351 1.1e-34 S Protein of unknown function (DUF2508)
IPNEDICM_01352 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
IPNEDICM_01353 8.9e-53 yaaQ S Cyclic-di-AMP receptor
IPNEDICM_01354 1.5e-155 holB 2.7.7.7 L DNA polymerase III
IPNEDICM_01355 1.8e-59 yabA L Involved in initiation control of chromosome replication
IPNEDICM_01356 5.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
IPNEDICM_01357 1.4e-130 fat 3.1.2.21 I Acyl-ACP thioesterase
IPNEDICM_01358 2.2e-85 S ECF transporter, substrate-specific component
IPNEDICM_01359 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
IPNEDICM_01360 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
IPNEDICM_01361 4.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
IPNEDICM_01362 1.9e-245 L Transposase IS66 family
IPNEDICM_01363 8.7e-34 S Transposase C of IS166 homeodomain
IPNEDICM_01364 9.3e-64 L PFAM IS66 Orf2 family protein
IPNEDICM_01365 7.7e-22
IPNEDICM_01366 7e-43 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
IPNEDICM_01367 6.6e-182 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
IPNEDICM_01368 3.4e-284 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
IPNEDICM_01369 0.0 uup S ABC transporter, ATP-binding protein
IPNEDICM_01370 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
IPNEDICM_01371 2.2e-54 oppA E ABC transporter substrate-binding protein
IPNEDICM_01372 1.3e-149 oppA E ABC transporter substrate-binding protein
IPNEDICM_01373 4.1e-33 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
IPNEDICM_01374 1.1e-47 S Peptidase propeptide and YPEB domain
IPNEDICM_01375 6e-46 L An automated process has identified a potential problem with this gene model
IPNEDICM_01376 1.4e-09 K FCD
IPNEDICM_01377 4.7e-26 K FCD
IPNEDICM_01378 1.6e-60 clcA P chloride
IPNEDICM_01379 8.8e-41 clcA P chloride
IPNEDICM_01380 3.7e-27 L Transposase
IPNEDICM_01381 3.8e-115 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
IPNEDICM_01383 2.6e-65 C 2Fe-2S iron-sulfur cluster binding domain
IPNEDICM_01384 4.1e-156 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
IPNEDICM_01385 4.3e-52 K helix_turn_helix gluconate operon transcriptional repressor
IPNEDICM_01386 1e-162 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
IPNEDICM_01387 1.5e-234 L Transposase DDE domain
IPNEDICM_01388 3e-112 L PFAM transposase IS116 IS110 IS902
IPNEDICM_01389 1e-190 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_01390 1.2e-10
IPNEDICM_01391 7e-143 L PFAM transposase, IS4 family protein
IPNEDICM_01392 3.7e-101 potB E Binding-protein-dependent transport system inner membrane component
IPNEDICM_01395 1.4e-140 L An automated process has identified a potential problem with this gene model
IPNEDICM_01396 1.3e-191 L COG2963 Transposase and inactivated derivatives
IPNEDICM_01397 2.8e-34 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
IPNEDICM_01399 1.1e-183 scrR K helix_turn _helix lactose operon repressor
IPNEDICM_01400 3.7e-295 scrB 3.2.1.26 GH32 G invertase
IPNEDICM_01401 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
IPNEDICM_01402 2.3e-181 M CHAP domain
IPNEDICM_01403 3.5e-75
IPNEDICM_01404 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
IPNEDICM_01405 5.9e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
IPNEDICM_01406 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
IPNEDICM_01407 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IPNEDICM_01408 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
IPNEDICM_01409 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
IPNEDICM_01410 9.6e-41 yajC U Preprotein translocase
IPNEDICM_01411 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
IPNEDICM_01412 6.2e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
IPNEDICM_01413 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
IPNEDICM_01414 2e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
IPNEDICM_01415 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
IPNEDICM_01416 2e-42 yrzL S Belongs to the UPF0297 family
IPNEDICM_01417 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IPNEDICM_01418 1.1e-50 yrzB S Belongs to the UPF0473 family
IPNEDICM_01419 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
IPNEDICM_01420 3.5e-54 trxA O Belongs to the thioredoxin family
IPNEDICM_01421 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
IPNEDICM_01422 1.1e-71 yslB S Protein of unknown function (DUF2507)
IPNEDICM_01423 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
IPNEDICM_01424 1.1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
IPNEDICM_01425 5.1e-10
IPNEDICM_01426 5.4e-113
IPNEDICM_01427 1.7e-139
IPNEDICM_01428 6.9e-100 V ATPases associated with a variety of cellular activities
IPNEDICM_01429 3.7e-146 ykuT M mechanosensitive ion channel
IPNEDICM_01430 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
IPNEDICM_01431 1.3e-36
IPNEDICM_01432 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
IPNEDICM_01433 3.2e-181 ccpA K catabolite control protein A
IPNEDICM_01434 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
IPNEDICM_01435 4.3e-55
IPNEDICM_01436 5.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
IPNEDICM_01437 2.1e-92 yutD S Protein of unknown function (DUF1027)
IPNEDICM_01438 3.4e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
IPNEDICM_01439 3.7e-100 S Protein of unknown function (DUF1461)
IPNEDICM_01440 6.8e-116 dedA S SNARE-like domain protein
IPNEDICM_01441 7.5e-183 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
IPNEDICM_01447 5.4e-60 L Resolvase, N-terminal
IPNEDICM_01448 1.6e-166 L Putative transposase DNA-binding domain
IPNEDICM_01468 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
IPNEDICM_01469 7.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
IPNEDICM_01470 1.4e-176 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
IPNEDICM_01471 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
IPNEDICM_01472 1.7e-29 secG U Preprotein translocase
IPNEDICM_01473 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
IPNEDICM_01474 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
IPNEDICM_01476 2.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
IPNEDICM_01477 1.7e-129 manY G PTS system
IPNEDICM_01478 1e-173 manN G system, mannose fructose sorbose family IID component
IPNEDICM_01479 1.1e-62 manO S Domain of unknown function (DUF956)
IPNEDICM_01480 3.3e-158 K Transcriptional regulator
IPNEDICM_01481 1.3e-85 maa S transferase hexapeptide repeat
IPNEDICM_01482 1.7e-241 cycA E Amino acid permease
IPNEDICM_01483 7.6e-49 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
IPNEDICM_01484 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
IPNEDICM_01485 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
IPNEDICM_01486 7.3e-178 mtlR K Mga helix-turn-helix domain
IPNEDICM_01487 6.8e-226 I Protein of unknown function (DUF2974)
IPNEDICM_01488 1.9e-116 yhiD S MgtC family
IPNEDICM_01490 1.4e-18 K Helix-turn-helix XRE-family like proteins
IPNEDICM_01491 6.9e-64
IPNEDICM_01492 2.6e-84
IPNEDICM_01493 1.4e-134 D Ftsk spoiiie family protein
IPNEDICM_01494 5.1e-145 S Replication initiation factor
IPNEDICM_01495 3.9e-55
IPNEDICM_01496 2.3e-26
IPNEDICM_01497 9.5e-220 L Belongs to the 'phage' integrase family
IPNEDICM_01499 1.2e-160 mtlR K Mga helix-turn-helix domain
IPNEDICM_01500 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
IPNEDICM_01501 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IPNEDICM_01502 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
IPNEDICM_01503 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
IPNEDICM_01504 2.3e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
IPNEDICM_01505 2.1e-32
IPNEDICM_01506 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
IPNEDICM_01507 2.3e-156 K Helix-turn-helix XRE-family like proteins
IPNEDICM_01508 3.9e-298 V ABC transporter transmembrane region
IPNEDICM_01509 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
IPNEDICM_01510 1.7e-193 S TerB-C domain
IPNEDICM_01511 2.6e-138 S TerB-C domain
IPNEDICM_01512 1.4e-245 P P-loop Domain of unknown function (DUF2791)
IPNEDICM_01513 0.0 lhr L DEAD DEAH box helicase
IPNEDICM_01514 1.4e-60
IPNEDICM_01515 1.3e-227 amtB P ammonium transporter
IPNEDICM_01516 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
IPNEDICM_01518 6.6e-61 psiE S Phosphate-starvation-inducible E
IPNEDICM_01519 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
IPNEDICM_01520 2.9e-69 S Iron-sulphur cluster biosynthesis
IPNEDICM_01522 2.3e-30
IPNEDICM_01523 2.6e-171 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
IPNEDICM_01524 6.2e-12
IPNEDICM_01525 1.5e-16 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IPNEDICM_01526 4.1e-78 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IPNEDICM_01527 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IPNEDICM_01528 5.8e-78 M LysM domain protein
IPNEDICM_01529 4.7e-159 D nuclear chromosome segregation
IPNEDICM_01530 1.2e-105 G Phosphoglycerate mutase family
IPNEDICM_01531 2.6e-89 G Histidine phosphatase superfamily (branch 1)
IPNEDICM_01532 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
IPNEDICM_01533 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
IPNEDICM_01535 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
IPNEDICM_01537 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
IPNEDICM_01538 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
IPNEDICM_01539 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
IPNEDICM_01540 4.4e-144 K SIS domain
IPNEDICM_01541 4.8e-44 slpX S SLAP domain
IPNEDICM_01542 5.3e-167 slpX S SLAP domain
IPNEDICM_01543 1.3e-22 3.6.4.12 S transposase or invertase
IPNEDICM_01544 6.6e-11
IPNEDICM_01545 3.2e-240 npr 1.11.1.1 C NADH oxidase
IPNEDICM_01548 4.4e-239 oppA2 E ABC transporter, substratebinding protein
IPNEDICM_01549 3.4e-45 oppA2 E ABC transporter, substratebinding protein
IPNEDICM_01550 3.3e-179
IPNEDICM_01551 4.6e-123 gntR1 K UTRA
IPNEDICM_01552 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
IPNEDICM_01553 2.1e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
IPNEDICM_01554 1.7e-204 csaB M Glycosyl transferases group 1
IPNEDICM_01555 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IPNEDICM_01556 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
IPNEDICM_01557 1.4e-204 tnpB L Putative transposase DNA-binding domain
IPNEDICM_01558 0.0 pacL 3.6.3.8 P P-type ATPase
IPNEDICM_01559 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
IPNEDICM_01560 6e-258 epsU S Polysaccharide biosynthesis protein
IPNEDICM_01561 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
IPNEDICM_01562 4.1e-83 ydcK S Belongs to the SprT family
IPNEDICM_01564 5.2e-84 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
IPNEDICM_01565 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
IPNEDICM_01566 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
IPNEDICM_01567 5.8e-203 camS S sex pheromone
IPNEDICM_01568 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IPNEDICM_01569 2.9e-268 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
IPNEDICM_01570 2.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IPNEDICM_01571 2.7e-171 yegS 2.7.1.107 G Lipid kinase
IPNEDICM_01572 4.3e-108 ybhL S Belongs to the BI1 family
IPNEDICM_01573 2.6e-57
IPNEDICM_01574 1.4e-147 I transferase activity, transferring acyl groups other than amino-acyl groups
IPNEDICM_01575 2.8e-244 nhaC C Na H antiporter NhaC
IPNEDICM_01576 6.3e-201 pbpX V Beta-lactamase
IPNEDICM_01577 4.9e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IPNEDICM_01578 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
IPNEDICM_01583 1.9e-259 emrY EGP Major facilitator Superfamily
IPNEDICM_01584 2e-91 yxdD K Bacterial regulatory proteins, tetR family
IPNEDICM_01585 0.0 4.2.1.53 S Myosin-crossreactive antigen
IPNEDICM_01586 5.5e-148 S cog cog1373
IPNEDICM_01587 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
IPNEDICM_01588 2e-157 S reductase
IPNEDICM_01589 9.3e-35
IPNEDICM_01590 5e-78 K Putative DNA-binding domain
IPNEDICM_01591 3.7e-27 L Transposase
IPNEDICM_01592 1.9e-22 K Putative DNA-binding domain
IPNEDICM_01593 7.6e-239 pyrP F Permease
IPNEDICM_01594 8.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
IPNEDICM_01595 9.2e-262 emrY EGP Major facilitator Superfamily
IPNEDICM_01596 2.7e-152 mdtG EGP Major facilitator Superfamily
IPNEDICM_01597 3.8e-139 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_01598 4.7e-182 pepA E M42 glutamyl aminopeptidase
IPNEDICM_01599 2.2e-311 ybiT S ABC transporter, ATP-binding protein
IPNEDICM_01600 5.9e-174 S Aldo keto reductase
IPNEDICM_01601 2.7e-138
IPNEDICM_01602 2.8e-202 steT E amino acid
IPNEDICM_01603 2.1e-18 steT E amino acid
IPNEDICM_01604 8.6e-243 steT E amino acid
IPNEDICM_01605 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
IPNEDICM_01606 1.9e-147 glnH ET ABC transporter
IPNEDICM_01607 1.4e-80 K Transcriptional regulator, MarR family
IPNEDICM_01608 6.9e-309 XK27_09600 V ABC transporter, ATP-binding protein
IPNEDICM_01609 0.0 V ABC transporter transmembrane region
IPNEDICM_01610 1.6e-100 S ABC-type cobalt transport system, permease component
IPNEDICM_01611 1e-246 G MFS/sugar transport protein
IPNEDICM_01612 9.8e-39 udk 2.7.1.48 F Zeta toxin
IPNEDICM_01613 3.8e-46 udk 2.7.1.48 F Zeta toxin
IPNEDICM_01614 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IPNEDICM_01615 1.2e-146 glnH ET ABC transporter substrate-binding protein
IPNEDICM_01616 3.7e-90 gluC P ABC transporter permease
IPNEDICM_01617 4.7e-109 glnP P ABC transporter permease
IPNEDICM_01618 1.1e-164 S Protein of unknown function (DUF2974)
IPNEDICM_01619 5.6e-86
IPNEDICM_01620 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
IPNEDICM_01621 8.1e-175 ulaG S Beta-lactamase superfamily domain
IPNEDICM_01622 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
IPNEDICM_01623 1.3e-231 ulaA S PTS system sugar-specific permease component
IPNEDICM_01624 4.1e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
IPNEDICM_01625 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
IPNEDICM_01626 7.2e-129 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
IPNEDICM_01627 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
IPNEDICM_01628 5.2e-68 L haloacid dehalogenase-like hydrolase
IPNEDICM_01629 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
IPNEDICM_01630 1.4e-16 L Transposase
IPNEDICM_01631 1.9e-12 L Transposase
IPNEDICM_01632 5.9e-13 K Acetyltransferase (GNAT) domain
IPNEDICM_01633 3.4e-140 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_01634 2.4e-22 S CAAX protease self-immunity
IPNEDICM_01635 1.4e-22 S CAAX protease self-immunity
IPNEDICM_01636 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
IPNEDICM_01638 1.6e-96 ybaT E Amino acid permease
IPNEDICM_01639 1.7e-07 S LPXTG cell wall anchor motif
IPNEDICM_01640 4.4e-146 S Putative ABC-transporter type IV
IPNEDICM_01642 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
IPNEDICM_01643 2e-116 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IPNEDICM_01644 1.2e-232 oppA E ABC transporter substrate-binding protein
IPNEDICM_01645 2.1e-95 oppA E ABC transporter substrate-binding protein
IPNEDICM_01646 3.2e-176 K AI-2E family transporter
IPNEDICM_01647 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
IPNEDICM_01648 4.1e-18
IPNEDICM_01649 4.1e-245 G Major Facilitator
IPNEDICM_01650 1.3e-79 E Zn peptidase
IPNEDICM_01651 1.2e-41 ps115 K Helix-turn-helix XRE-family like proteins
IPNEDICM_01652 5.6e-45
IPNEDICM_01653 4.5e-66 S Bacteriocin helveticin-J
IPNEDICM_01654 1.7e-66 S SLAP domain
IPNEDICM_01655 5.8e-45
IPNEDICM_01656 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
IPNEDICM_01657 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
IPNEDICM_01658 1.7e-174 ABC-SBP S ABC transporter
IPNEDICM_01659 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
IPNEDICM_01660 1.6e-48 P CorA-like Mg2+ transporter protein
IPNEDICM_01661 5.2e-75 P CorA-like Mg2+ transporter protein
IPNEDICM_01662 3.5e-160 yvgN C Aldo keto reductase
IPNEDICM_01663 0.0 tetP J elongation factor G
IPNEDICM_01664 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
IPNEDICM_01665 1.2e-134 EGP Major facilitator Superfamily
IPNEDICM_01667 1.7e-230 G Bacterial extracellular solute-binding protein
IPNEDICM_01668 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
IPNEDICM_01669 3.5e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IPNEDICM_01670 1e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
IPNEDICM_01671 0.0 kup P Transport of potassium into the cell
IPNEDICM_01672 9.1e-175 rihB 3.2.2.1 F Nucleoside
IPNEDICM_01673 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
IPNEDICM_01674 1.2e-154 S hydrolase
IPNEDICM_01675 2.5e-59 S Enterocin A Immunity
IPNEDICM_01676 3.1e-136 glcR K DeoR C terminal sensor domain
IPNEDICM_01677 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
IPNEDICM_01678 2e-160 rssA S Phospholipase, patatin family
IPNEDICM_01679 5.4e-147 S hydrolase
IPNEDICM_01680 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
IPNEDICM_01681 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
IPNEDICM_01682 1.6e-80
IPNEDICM_01683 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
IPNEDICM_01684 2.1e-39
IPNEDICM_01685 3.9e-119 C nitroreductase
IPNEDICM_01686 1.7e-249 yhdP S Transporter associated domain
IPNEDICM_01687 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
IPNEDICM_01688 0.0 1.3.5.4 C FAD binding domain
IPNEDICM_01689 1.1e-87 L PFAM transposase, IS4 family protein
IPNEDICM_01690 1.2e-49 L PFAM transposase, IS4 family protein
IPNEDICM_01691 1.7e-213 1.3.5.4 C FAD binding domain
IPNEDICM_01692 3.4e-126 1.3.5.4 C FAD binding domain
IPNEDICM_01693 6.4e-139 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_01694 9.7e-231 potE E amino acid
IPNEDICM_01695 2.6e-61 M Glycosyl hydrolases family 25
IPNEDICM_01696 1.3e-61 M Glycosyl hydrolases family 25
IPNEDICM_01697 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
IPNEDICM_01698 4.7e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IPNEDICM_01700 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
IPNEDICM_01701 7e-87 gtcA S Teichoic acid glycosylation protein
IPNEDICM_01702 4.1e-80 fld C Flavodoxin
IPNEDICM_01703 1.4e-163 map 3.4.11.18 E Methionine Aminopeptidase
IPNEDICM_01704 3.6e-163 yihY S Belongs to the UPF0761 family
IPNEDICM_01705 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
IPNEDICM_01706 5.6e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
IPNEDICM_01707 3.6e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
IPNEDICM_01708 9.4e-46
IPNEDICM_01709 1.8e-38 D Alpha beta
IPNEDICM_01710 1.4e-118 D Alpha beta
IPNEDICM_01711 3e-262 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IPNEDICM_01712 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
IPNEDICM_01713 1.6e-85
IPNEDICM_01714 2.7e-74
IPNEDICM_01715 1.4e-140 hlyX S Transporter associated domain
IPNEDICM_01716 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
IPNEDICM_01717 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
IPNEDICM_01718 0.0 clpE O Belongs to the ClpA ClpB family
IPNEDICM_01719 5.3e-26
IPNEDICM_01720 8.5e-41 ptsH G phosphocarrier protein HPR
IPNEDICM_01721 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IPNEDICM_01722 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
IPNEDICM_01723 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
IPNEDICM_01724 1.4e-158 coiA 3.6.4.12 S Competence protein
IPNEDICM_01725 4.6e-114 yjbH Q Thioredoxin
IPNEDICM_01726 6.8e-110 yjbK S CYTH
IPNEDICM_01727 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
IPNEDICM_01728 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
IPNEDICM_01729 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
IPNEDICM_01730 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
IPNEDICM_01731 4.2e-92 S SNARE associated Golgi protein
IPNEDICM_01732 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
IPNEDICM_01733 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
IPNEDICM_01734 2.6e-214 yubA S AI-2E family transporter
IPNEDICM_01735 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
IPNEDICM_01736 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
IPNEDICM_01737 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
IPNEDICM_01738 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
IPNEDICM_01739 1.9e-236 S Peptidase M16
IPNEDICM_01740 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
IPNEDICM_01741 5.2e-97 ymfM S Helix-turn-helix domain
IPNEDICM_01742 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IPNEDICM_01743 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
IPNEDICM_01744 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
IPNEDICM_01745 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
IPNEDICM_01746 5.1e-119 yvyE 3.4.13.9 S YigZ family
IPNEDICM_01747 4.7e-246 comFA L Helicase C-terminal domain protein
IPNEDICM_01748 9.4e-132 comFC S Competence protein
IPNEDICM_01749 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
IPNEDICM_01750 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
IPNEDICM_01751 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
IPNEDICM_01752 5.1e-17
IPNEDICM_01753 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
IPNEDICM_01754 3.5e-157 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
IPNEDICM_01755 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
IPNEDICM_01756 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
IPNEDICM_01757 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
IPNEDICM_01758 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
IPNEDICM_01759 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
IPNEDICM_01760 4.1e-90 S Short repeat of unknown function (DUF308)
IPNEDICM_01761 6.2e-165 rapZ S Displays ATPase and GTPase activities
IPNEDICM_01762 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
IPNEDICM_01763 2.1e-171 whiA K May be required for sporulation
IPNEDICM_01764 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
IPNEDICM_01765 0.0 S SH3-like domain
IPNEDICM_01766 4.9e-111 ybbL S ABC transporter, ATP-binding protein
IPNEDICM_01767 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
IPNEDICM_01768 3.1e-48 S Domain of unknown function (DUF4811)
IPNEDICM_01769 1.4e-262 lmrB EGP Major facilitator Superfamily
IPNEDICM_01770 4.2e-77 K MerR HTH family regulatory protein
IPNEDICM_01771 3.1e-139 S Cysteine-rich secretory protein family
IPNEDICM_01772 4.6e-274 ycaM E amino acid
IPNEDICM_01773 6.3e-290
IPNEDICM_01775 3.3e-189 cggR K Putative sugar-binding domain
IPNEDICM_01776 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
IPNEDICM_01777 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
IPNEDICM_01778 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
IPNEDICM_01779 6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
IPNEDICM_01780 1.2e-94
IPNEDICM_01781 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
IPNEDICM_01782 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
IPNEDICM_01783 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
IPNEDICM_01784 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
IPNEDICM_01785 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
IPNEDICM_01786 2e-163 murB 1.3.1.98 M Cell wall formation
IPNEDICM_01787 3.5e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
IPNEDICM_01788 1.3e-129 potB P ABC transporter permease
IPNEDICM_01789 4.8e-127 potC P ABC transporter permease
IPNEDICM_01790 7.3e-208 potD P ABC transporter
IPNEDICM_01791 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
IPNEDICM_01792 2e-172 ybbR S YbbR-like protein
IPNEDICM_01793 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IPNEDICM_01794 1.4e-147 S hydrolase
IPNEDICM_01795 1.8e-75 K Penicillinase repressor
IPNEDICM_01796 1.6e-118
IPNEDICM_01797 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IPNEDICM_01798 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
IPNEDICM_01799 8.3e-143 licT K CAT RNA binding domain
IPNEDICM_01800 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
IPNEDICM_01801 3.3e-296 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
IPNEDICM_01802 1e-149 D Alpha beta
IPNEDICM_01803 1.9e-47 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
IPNEDICM_01804 1.6e-73 marR K Transcriptional regulator, MarR family
IPNEDICM_01805 1.3e-48 4.2.1.59 I 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
IPNEDICM_01806 1.1e-86 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IPNEDICM_01807 2.9e-38 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IPNEDICM_01808 2.1e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
IPNEDICM_01809 1.7e-139 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
IPNEDICM_01810 2.9e-107 IQ reductase
IPNEDICM_01811 4e-210 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
IPNEDICM_01812 2.2e-49 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
IPNEDICM_01813 9.2e-61 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
IPNEDICM_01814 9.6e-237 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
IPNEDICM_01815 3.3e-139 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
IPNEDICM_01816 1.1e-128 accA 2.1.3.15, 6.4.1.2 I alpha subunit
IPNEDICM_01817 1.9e-122 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
IPNEDICM_01818 3e-80 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
IPNEDICM_01819 1.2e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IPNEDICM_01822 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
IPNEDICM_01823 1.3e-273 E amino acid
IPNEDICM_01824 0.0 L Helicase C-terminal domain protein
IPNEDICM_01825 2.4e-204 pbpX1 V Beta-lactamase
IPNEDICM_01826 5.1e-226 N Uncharacterized conserved protein (DUF2075)
IPNEDICM_01827 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
IPNEDICM_01828 2.4e-34 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
IPNEDICM_01829 3.7e-26 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
IPNEDICM_01830 5.2e-112 ica2 GT2 M Glycosyl transferase family group 2
IPNEDICM_01831 8.2e-36
IPNEDICM_01832 2.2e-90 2.7.7.65 T GGDEF domain
IPNEDICM_01833 8.8e-82 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
IPNEDICM_01835 2e-310 E Amino acid permease
IPNEDICM_01836 5.8e-100 L Helix-turn-helix domain
IPNEDICM_01837 1.3e-160 L hmm pf00665
IPNEDICM_01839 3.7e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IPNEDICM_01840 3.5e-101 ylbE GM NAD(P)H-binding
IPNEDICM_01841 7.6e-94 S VanZ like family
IPNEDICM_01842 8.9e-133 yebC K Transcriptional regulatory protein
IPNEDICM_01843 1.7e-179 comGA NU Type II IV secretion system protein
IPNEDICM_01844 1.7e-171 comGB NU type II secretion system
IPNEDICM_01845 3.1e-43 comGC U competence protein ComGC
IPNEDICM_01846 1.8e-69
IPNEDICM_01847 2.3e-41
IPNEDICM_01848 3.8e-77 comGF U Putative Competence protein ComGF
IPNEDICM_01849 1.6e-21
IPNEDICM_01850 1.9e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
IPNEDICM_01851 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IPNEDICM_01853 8.5e-151 L Belongs to the 'phage' integrase family
IPNEDICM_01854 2.6e-09 S Pfam:DUF955
IPNEDICM_01855 2.2e-25 K Helix-turn-helix domain
IPNEDICM_01856 1.3e-20 XK27_07105 K Helix-turn-helix XRE-family like proteins
IPNEDICM_01857 1.3e-30 K Helix-turn-helix domain
IPNEDICM_01859 4.1e-09 S Arc-like DNA binding domain
IPNEDICM_01861 4e-21 K Conserved phage C-terminus (Phg_2220_C)
IPNEDICM_01862 1.5e-26 S Domain of unknown function (DUF771)
IPNEDICM_01870 3.6e-34 S Phage derived protein Gp49-like (DUF891)
IPNEDICM_01871 7.1e-35 K Helix-turn-helix XRE-family like proteins
IPNEDICM_01873 1.1e-188 L N-6 DNA Methylase
IPNEDICM_01874 2.2e-26 S Type I restriction modification DNA specificity domain
IPNEDICM_01875 5.7e-11 S Single-strand binding protein family
IPNEDICM_01881 1.1e-15 S SLAP domain
IPNEDICM_01883 1.4e-24 srtA 3.4.22.70 M sortase family
IPNEDICM_01885 5.6e-40 M domain protein
IPNEDICM_01886 6.7e-15 S SLAP domain
IPNEDICM_01887 8.4e-33 M domain protein
IPNEDICM_01891 1.8e-141 U TraM recognition site of TraD and TraG
IPNEDICM_01892 3.9e-32 I mechanosensitive ion channel activity
IPNEDICM_01894 8.4e-15
IPNEDICM_01895 1.8e-159 trsE S COG0433 Predicted ATPase
IPNEDICM_01896 1.2e-32 M Peptidase family M23
IPNEDICM_01899 3.4e-17 CO COG0526, thiol-disulfide isomerase and thioredoxins
IPNEDICM_01902 2.5e-89 M Protein of unknown function (DUF3737)
IPNEDICM_01903 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
IPNEDICM_01904 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
IPNEDICM_01905 7.7e-67 S SdpI/YhfL protein family
IPNEDICM_01906 2.9e-128 K Transcriptional regulatory protein, C terminal
IPNEDICM_01907 1.6e-266 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
IPNEDICM_01908 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
IPNEDICM_01909 1.8e-12 vanZ V VanZ like family
IPNEDICM_01910 1.4e-50 L An automated process has identified a potential problem with this gene model
IPNEDICM_01911 1.7e-16 vanZ V VanZ like family
IPNEDICM_01912 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
IPNEDICM_01913 4.9e-217 EGP Major facilitator Superfamily
IPNEDICM_01914 1.7e-195 ampC V Beta-lactamase
IPNEDICM_01917 8.4e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
IPNEDICM_01918 1.7e-113 tdk 2.7.1.21 F thymidine kinase
IPNEDICM_01919 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
IPNEDICM_01920 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
IPNEDICM_01921 1.9e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
IPNEDICM_01922 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
IPNEDICM_01923 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
IPNEDICM_01924 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IPNEDICM_01925 4.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
IPNEDICM_01926 1.3e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IPNEDICM_01927 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
IPNEDICM_01928 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
IPNEDICM_01929 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
IPNEDICM_01930 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
IPNEDICM_01931 2e-30 ywzB S Protein of unknown function (DUF1146)
IPNEDICM_01932 1.2e-177 mbl D Cell shape determining protein MreB Mrl
IPNEDICM_01933 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
IPNEDICM_01934 3.3e-33 S Protein of unknown function (DUF2969)
IPNEDICM_01935 4.7e-216 rodA D Belongs to the SEDS family
IPNEDICM_01936 1.8e-78 usp6 T universal stress protein
IPNEDICM_01937 8.4e-39
IPNEDICM_01938 6.3e-238 rarA L recombination factor protein RarA
IPNEDICM_01939 1.3e-84 yueI S Protein of unknown function (DUF1694)
IPNEDICM_01940 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
IPNEDICM_01941 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
IPNEDICM_01942 6.2e-213 iscS2 2.8.1.7 E Aminotransferase class V
IPNEDICM_01943 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IPNEDICM_01944 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
IPNEDICM_01945 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
IPNEDICM_01946 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
IPNEDICM_01947 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
IPNEDICM_01948 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
IPNEDICM_01949 1.5e-94 S Protein of unknown function (DUF3990)
IPNEDICM_01950 6.5e-44
IPNEDICM_01952 0.0 3.6.3.8 P P-type ATPase
IPNEDICM_01953 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
IPNEDICM_01954 2.5e-52
IPNEDICM_01955 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
IPNEDICM_01956 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
IPNEDICM_01957 5.7e-126 S Haloacid dehalogenase-like hydrolase
IPNEDICM_01958 6.6e-108 radC L DNA repair protein
IPNEDICM_01959 2.4e-176 mreB D cell shape determining protein MreB
IPNEDICM_01960 2e-147 mreC M Involved in formation and maintenance of cell shape
IPNEDICM_01961 2.7e-94 mreD
IPNEDICM_01963 6.4e-54 S Protein of unknown function (DUF3397)
IPNEDICM_01964 6.3e-78 mraZ K Belongs to the MraZ family
IPNEDICM_01965 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
IPNEDICM_01966 1.8e-54 ftsL D Cell division protein FtsL
IPNEDICM_01967 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
IPNEDICM_01968 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IPNEDICM_01969 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
IPNEDICM_01970 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
IPNEDICM_01971 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
IPNEDICM_01972 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
IPNEDICM_01973 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IPNEDICM_01974 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
IPNEDICM_01975 1.7e-45 yggT S YGGT family
IPNEDICM_01976 5.7e-149 ylmH S S4 domain protein
IPNEDICM_01977 2.8e-74 gpsB D DivIVA domain protein
IPNEDICM_01978 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
IPNEDICM_01979 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
IPNEDICM_01980 1.1e-101 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
IPNEDICM_01981 6.7e-37
IPNEDICM_01982 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IPNEDICM_01983 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
IPNEDICM_01984 5.4e-56 XK27_04120 S Putative amino acid metabolism
IPNEDICM_01985 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
IPNEDICM_01986 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
IPNEDICM_01987 8.3e-106 S Repeat protein
IPNEDICM_01988 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
IPNEDICM_01989 1.6e-294 L Nuclease-related domain
IPNEDICM_01990 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
IPNEDICM_01991 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
IPNEDICM_01992 3.5e-32 ykzG S Belongs to the UPF0356 family
IPNEDICM_01993 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
IPNEDICM_01994 0.0 typA T GTP-binding protein TypA
IPNEDICM_01995 5.9e-211 ftsW D Belongs to the SEDS family
IPNEDICM_01996 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
IPNEDICM_01997 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
IPNEDICM_01998 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
IPNEDICM_01999 2.4e-187 ylbL T Belongs to the peptidase S16 family
IPNEDICM_02000 3.1e-79 comEA L Competence protein ComEA
IPNEDICM_02001 2.3e-30 comEC S Competence protein ComEC
IPNEDICM_02002 0.0 comEC S Competence protein ComEC
IPNEDICM_02003 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
IPNEDICM_02004 2.6e-34 rpsT J Binds directly to 16S ribosomal RNA
IPNEDICM_02005 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
IPNEDICM_02006 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
IPNEDICM_02007 1.3e-148
IPNEDICM_02008 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
IPNEDICM_02009 5.8e-215 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
IPNEDICM_02010 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
IPNEDICM_02011 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
IPNEDICM_02012 7.8e-39 yjeM E Amino Acid
IPNEDICM_02013 3.4e-175 yjeM E Amino Acid
IPNEDICM_02014 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
IPNEDICM_02015 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
IPNEDICM_02016 1.3e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
IPNEDICM_02017 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
IPNEDICM_02018 2e-219 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
IPNEDICM_02019 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IPNEDICM_02020 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
IPNEDICM_02021 2.7e-216 aspC 2.6.1.1 E Aminotransferase
IPNEDICM_02022 2.6e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IPNEDICM_02023 2.1e-194 pbpX1 V Beta-lactamase
IPNEDICM_02024 1.2e-299 I Protein of unknown function (DUF2974)
IPNEDICM_02025 1.2e-225 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IPNEDICM_02026 1.5e-31 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IPNEDICM_02027 3.9e-46 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
IPNEDICM_02028 1.5e-203 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
IPNEDICM_02029 6.8e-156 ypbG 2.7.1.2 GK ROK family
IPNEDICM_02030 1.8e-73 C nitroreductase
IPNEDICM_02031 1.9e-70 S Domain of unknown function (DUF4767)
IPNEDICM_02032 5.8e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
IPNEDICM_02033 2.5e-147 yitS S Uncharacterised protein, DegV family COG1307
IPNEDICM_02034 3.2e-101 3.6.1.27 I Acid phosphatase homologues
IPNEDICM_02035 3.4e-140 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_02036 5.6e-191 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
IPNEDICM_02038 2e-178 MA20_14895 S Conserved hypothetical protein 698
IPNEDICM_02039 1.1e-83 dps P Belongs to the Dps family
IPNEDICM_02040 3.8e-20 1.3.5.4 C FAD dependent oxidoreductase
IPNEDICM_02041 5.6e-101 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
IPNEDICM_02042 1.8e-58 S Putative adhesin
IPNEDICM_02043 3.5e-71 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
IPNEDICM_02044 2e-234 mepA V MATE efflux family protein
IPNEDICM_02045 3.4e-140 L Transposase and inactivated derivatives, IS30 family
IPNEDICM_02046 2.4e-10 L Psort location Cytoplasmic, score
IPNEDICM_02047 4e-89 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
IPNEDICM_02048 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
IPNEDICM_02049 1.5e-227 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
IPNEDICM_02050 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
IPNEDICM_02051 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IPNEDICM_02054 2e-10 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IPNEDICM_02055 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
IPNEDICM_02056 1.4e-36 S Cytochrome B5
IPNEDICM_02057 6e-168 arbZ I Phosphate acyltransferases
IPNEDICM_02058 1.6e-182 arbY M Glycosyl transferase family 8
IPNEDICM_02059 5e-184 arbY M Glycosyl transferase family 8
IPNEDICM_02060 5e-156 arbx M Glycosyl transferase family 8
IPNEDICM_02061 1.6e-148 arbV 2.3.1.51 I Acyl-transferase
IPNEDICM_02063 4.9e-34
IPNEDICM_02065 4.8e-131 K response regulator
IPNEDICM_02066 2.2e-305 vicK 2.7.13.3 T Histidine kinase
IPNEDICM_02067 1.6e-257 yycH S YycH protein
IPNEDICM_02068 3.4e-149 yycI S YycH protein
IPNEDICM_02069 4.1e-147 vicX 3.1.26.11 S domain protein
IPNEDICM_02070 1.6e-161 htrA 3.4.21.107 O serine protease
IPNEDICM_02071 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
IPNEDICM_02072 2.8e-134 S Uncharacterised protein family (UPF0236)
IPNEDICM_02073 3.1e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
IPNEDICM_02074 1.7e-201 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IPNEDICM_02075 2.2e-120 lsa S ABC transporter
IPNEDICM_02076 2.7e-83 S Protein of unknown function (DUF1211)
IPNEDICM_02077 3.1e-113 ltrA S Bacterial low temperature requirement A protein (LtrA)
IPNEDICM_02078 2.8e-119 3.6.1.55 F NUDIX domain
IPNEDICM_02079 1.5e-245 brnQ U Component of the transport system for branched-chain amino acids
IPNEDICM_02080 0.0 L Plasmid pRiA4b ORF-3-like protein
IPNEDICM_02081 1.3e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
IPNEDICM_02082 2.5e-08 S Protein of unknown function (DUF3021)
IPNEDICM_02083 9e-34 K Bacterial regulatory helix-turn-helix protein, lysR family
IPNEDICM_02085 4.2e-63 lmrB EGP Major facilitator Superfamily
IPNEDICM_02086 2.9e-122 rbtT P Major Facilitator Superfamily
IPNEDICM_02087 2.7e-202 XK27_00915 C Luciferase-like monooxygenase
IPNEDICM_02088 2.5e-86 K GNAT family
IPNEDICM_02089 1.4e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
IPNEDICM_02091 4.3e-36
IPNEDICM_02092 6.2e-288 P ABC transporter
IPNEDICM_02093 2.3e-07 V ABC-type multidrug transport system, ATPase and permease components
IPNEDICM_02094 3.7e-263 V ABC-type multidrug transport system, ATPase and permease components
IPNEDICM_02095 1.2e-250 yifK E Amino acid permease
IPNEDICM_02096 1.3e-179 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
IPNEDICM_02097 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
IPNEDICM_02098 0.0 aha1 P E1-E2 ATPase
IPNEDICM_02099 2.4e-175 F DNA/RNA non-specific endonuclease
IPNEDICM_02100 5.9e-160 metQ2 P Belongs to the nlpA lipoprotein family
IPNEDICM_02101 2.6e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IPNEDICM_02102 3.4e-73 metI P ABC transporter permease
IPNEDICM_02103 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
IPNEDICM_02104 1.9e-261 frdC 1.3.5.4 C FAD binding domain
IPNEDICM_02105 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
IPNEDICM_02106 3.5e-252 pepC 3.4.22.40 E Peptidase C1-like family
IPNEDICM_02107 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
IPNEDICM_02108 5.7e-272 P Sodium:sulfate symporter transmembrane region
IPNEDICM_02109 1.7e-153 ydjP I Alpha/beta hydrolase family
IPNEDICM_02110 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
IPNEDICM_02111 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
IPNEDICM_02112 2.4e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
IPNEDICM_02113 2.1e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
IPNEDICM_02114 9.3e-72 yeaL S Protein of unknown function (DUF441)
IPNEDICM_02115 3.5e-21
IPNEDICM_02116 3.6e-146 cbiQ P cobalt transport
IPNEDICM_02117 0.0 ykoD P ABC transporter, ATP-binding protein
IPNEDICM_02118 1.5e-95 S UPF0397 protein
IPNEDICM_02119 2.9e-66 S Domain of unknown function DUF1828
IPNEDICM_02120 5.5e-09
IPNEDICM_02121 1.5e-50
IPNEDICM_02122 2.6e-177 citR K Putative sugar-binding domain
IPNEDICM_02123 6.5e-249 yjjP S Putative threonine/serine exporter
IPNEDICM_02125 5.9e-37 M domain protein
IPNEDICM_02126 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
IPNEDICM_02127 6.5e-176 prmA J Ribosomal protein L11 methyltransferase
IPNEDICM_02128 8.5e-60
IPNEDICM_02129 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IPNEDICM_02130 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
IPNEDICM_02131 5.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
IPNEDICM_02132 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
IPNEDICM_02133 1.2e-222 patA 2.6.1.1 E Aminotransferase
IPNEDICM_02134 3.7e-27 L Transposase
IPNEDICM_02136 8.4e-25 G Peptidase_C39 like family
IPNEDICM_02137 2.8e-162 M NlpC/P60 family
IPNEDICM_02138 6.5e-91 G Peptidase_C39 like family
IPNEDICM_02139 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
IPNEDICM_02140 2.8e-77 P Cobalt transport protein
IPNEDICM_02141 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
IPNEDICM_02142 7.9e-174 K helix_turn_helix, arabinose operon control protein
IPNEDICM_02143 8.3e-157 htpX O Belongs to the peptidase M48B family
IPNEDICM_02144 5.1e-96 lemA S LemA family
IPNEDICM_02145 7.5e-192 ybiR P Citrate transporter
IPNEDICM_02146 2e-70 S Iron-sulphur cluster biosynthesis
IPNEDICM_02147 1.9e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
IPNEDICM_02148 1.2e-17
IPNEDICM_02149 1.1e-07 S Uncharacterised protein family (UPF0236)
IPNEDICM_02150 4.5e-189 ydaM M Glycosyl transferase
IPNEDICM_02151 4e-177 G Glycosyl hydrolases family 8
IPNEDICM_02152 1e-119 yfbR S HD containing hydrolase-like enzyme
IPNEDICM_02153 6.4e-159 L HNH nucleases
IPNEDICM_02154 7.3e-148 S Protein of unknown function (DUF805)
IPNEDICM_02155 3.4e-135 glnQ E ABC transporter, ATP-binding protein
IPNEDICM_02156 6.7e-290 glnP P ABC transporter permease
IPNEDICM_02157 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
IPNEDICM_02158 5.8e-64 yeaO S Protein of unknown function, DUF488
IPNEDICM_02159 1.3e-124 terC P Integral membrane protein TerC family
IPNEDICM_02160 9.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
IPNEDICM_02161 8.5e-133 cobB K SIR2 family
IPNEDICM_02162 2.8e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IPNEDICM_02163 4.8e-34 S reductase
IPNEDICM_02164 4.4e-39 S reductase
IPNEDICM_02165 2.7e-32 S reductase
IPNEDICM_02166 1.3e-148 yxeH S hydrolase
IPNEDICM_02167 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IPNEDICM_02168 1.1e-243 yfnA E Amino Acid
IPNEDICM_02169 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
IPNEDICM_02170 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
IPNEDICM_02171 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
IPNEDICM_02172 2.2e-292 I Acyltransferase
IPNEDICM_02173 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
IPNEDICM_02174 5.1e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
IPNEDICM_02175 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
IPNEDICM_02176 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
IPNEDICM_02177 6.1e-131 sip L Belongs to the 'phage' integrase family
IPNEDICM_02180 1.6e-22 S Hypothetical protein (DUF2513)
IPNEDICM_02181 7.4e-20 S Pfam:Peptidase_M78
IPNEDICM_02182 2.8e-20 ps115 K sequence-specific DNA binding
IPNEDICM_02185 1.4e-16
IPNEDICM_02186 6.7e-75 ps308 K AntA/AntB antirepressor
IPNEDICM_02187 2.5e-14
IPNEDICM_02193 5e-30 S HNH endonuclease
IPNEDICM_02194 6.1e-70 S AAA domain
IPNEDICM_02196 2.1e-151 res L Helicase C-terminal domain protein
IPNEDICM_02198 4.2e-42 S Protein of unknown function (DUF669)
IPNEDICM_02199 1.4e-272 S Phage plasmid primase, P4
IPNEDICM_02211 3.3e-37 S VRR_NUC
IPNEDICM_02213 3.4e-18
IPNEDICM_02214 5.3e-43 S HNH endonuclease
IPNEDICM_02215 4.6e-52 S Phage terminase, small subunit
IPNEDICM_02217 2.6e-22 V HNH endonuclease
IPNEDICM_02218 1.7e-228 S Phage Terminase
IPNEDICM_02220 1.5e-134 S Phage portal protein
IPNEDICM_02221 1.8e-66 S Clp protease
IPNEDICM_02222 2.6e-145 S peptidase activity
IPNEDICM_02223 1.9e-21 S Phage gp6-like head-tail connector protein
IPNEDICM_02225 8.8e-11 S Bacteriophage HK97-gp10, putative tail-component
IPNEDICM_02227 3.1e-13 S Pfam:Phage_TTP_1
IPNEDICM_02230 3.8e-134 xkdO D NLP P60 protein
IPNEDICM_02231 7.9e-31 S phage tail
IPNEDICM_02232 2e-249 S Phage minor structural protein
IPNEDICM_02234 7.9e-12 S Domain of unknown function (DUF2479)
IPNEDICM_02236 1.4e-17 GT2,GT4 LM gp58-like protein
IPNEDICM_02240 4.9e-24
IPNEDICM_02242 1.4e-38 S Bacteriophage holin of superfamily 6 (Holin_LLH)
IPNEDICM_02243 1.3e-115 M hydrolase, family 25
IPNEDICM_02245 6.8e-10
IPNEDICM_02246 2.8e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
IPNEDICM_02247 2.3e-23 S Protein of unknown function (DUF2929)
IPNEDICM_02248 0.0 dnaE 2.7.7.7 L DNA polymerase
IPNEDICM_02249 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
IPNEDICM_02250 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
IPNEDICM_02251 1e-167 cvfB S S1 domain
IPNEDICM_02252 2.9e-165 xerD D recombinase XerD
IPNEDICM_02253 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
IPNEDICM_02254 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
IPNEDICM_02255 1.6e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
IPNEDICM_02256 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
IPNEDICM_02257 2.2e-112 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
IPNEDICM_02258 2.7e-18 M Lysin motif
IPNEDICM_02259 2.2e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
IPNEDICM_02260 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
IPNEDICM_02261 4.3e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
IPNEDICM_02262 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
IPNEDICM_02263 3.9e-229 S Tetratricopeptide repeat protein
IPNEDICM_02264 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IPNEDICM_02265 1e-78 rimL J Acetyltransferase (GNAT) domain
IPNEDICM_02266 9.7e-133 S Alpha/beta hydrolase family
IPNEDICM_02267 1.7e-36 yxaM EGP Major facilitator Superfamily
IPNEDICM_02268 2.9e-117 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
IPNEDICM_02269 1e-79 S AAA domain
IPNEDICM_02270 3.3e-61 3.6.1.55 F NUDIX domain
IPNEDICM_02271 1.9e-138 2.4.2.3 F Phosphorylase superfamily
IPNEDICM_02272 9e-144 2.4.2.3 F Phosphorylase superfamily
IPNEDICM_02273 3.6e-151 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
IPNEDICM_02274 9.7e-65 yagE E amino acid
IPNEDICM_02275 8.4e-128 yagE E Amino acid permease
IPNEDICM_02276 4.3e-86 3.4.21.96 S SLAP domain
IPNEDICM_02277 8.8e-159 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
IPNEDICM_02278 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
IPNEDICM_02279 1.2e-107 hlyIII S protein, hemolysin III
IPNEDICM_02280 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
IPNEDICM_02281 7.1e-36 yozE S Belongs to the UPF0346 family
IPNEDICM_02282 1.1e-66 yjcE P NhaP-type Na H and K H
IPNEDICM_02283 1.5e-40 yjcE P Sodium proton antiporter
IPNEDICM_02284 1.9e-94 yjcE P Sodium proton antiporter
IPNEDICM_02285 8.1e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
IPNEDICM_02286 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IPNEDICM_02287 5.8e-152 dprA LU DNA protecting protein DprA
IPNEDICM_02288 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IPNEDICM_02289 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
IPNEDICM_02290 5e-141 xerC D Phage integrase, N-terminal SAM-like domain
IPNEDICM_02291 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
IPNEDICM_02292 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
IPNEDICM_02293 1.8e-180 lacX 5.1.3.3 G Aldose 1-epimerase
IPNEDICM_02294 1.4e-86 C Aldo keto reductase
IPNEDICM_02295 3.8e-48 M LysM domain protein
IPNEDICM_02296 2.9e-15 M LysM domain protein
IPNEDICM_02297 1.5e-61 L hmm pf00665
IPNEDICM_02298 1.4e-98 L Helix-turn-helix domain
IPNEDICM_02299 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
IPNEDICM_02300 3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IPNEDICM_02301 1e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IPNEDICM_02302 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
IPNEDICM_02303 1.4e-115 mmuP E amino acid
IPNEDICM_02304 1.4e-272 pepV 3.5.1.18 E dipeptidase PepV
IPNEDICM_02305 6.3e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
IPNEDICM_02306 1.7e-284 E Amino acid permease
IPNEDICM_02307 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
IPNEDICM_02308 2.3e-245 ynbB 4.4.1.1 P aluminum resistance
IPNEDICM_02309 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
IPNEDICM_02310 9.9e-82 C Flavodoxin
IPNEDICM_02311 4.8e-61 uvrA3 L excinuclease ABC, A subunit
IPNEDICM_02312 0.0 uvrA3 L excinuclease ABC, A subunit
IPNEDICM_02313 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
IPNEDICM_02314 2.1e-114 3.6.1.27 I Acid phosphatase homologues
IPNEDICM_02315 7.4e-205 L COG2826 Transposase and inactivated derivatives, IS30 family
IPNEDICM_02316 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
IPNEDICM_02317 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
IPNEDICM_02318 9.3e-204 pbpX1 V Beta-lactamase
IPNEDICM_02319 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
IPNEDICM_02320 7.5e-95 S ECF-type riboflavin transporter, S component
IPNEDICM_02321 1.3e-229 S Putative peptidoglycan binding domain
IPNEDICM_02322 9e-83 K Acetyltransferase (GNAT) domain
IPNEDICM_02323 1.7e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
IPNEDICM_02324 2.5e-191 yrvN L AAA C-terminal domain
IPNEDICM_02325 5.7e-65 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
IPNEDICM_02326 6.8e-153 treB G phosphotransferase system
IPNEDICM_02327 4.5e-111 treB G phosphotransferase system
IPNEDICM_02328 1.2e-100 treR K UTRA
IPNEDICM_02329 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
IPNEDICM_02330 5.7e-18
IPNEDICM_02331 1.5e-239 G Bacterial extracellular solute-binding protein
IPNEDICM_02332 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
IPNEDICM_02333 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
IPNEDICM_02335 0.0 S SLAP domain
IPNEDICM_02336 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
IPNEDICM_02337 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
IPNEDICM_02338 3.4e-42 S RloB-like protein
IPNEDICM_02339 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
IPNEDICM_02340 2.3e-51 3.1.21.3 V Type I restriction modification DNA specificity domain
IPNEDICM_02341 8.3e-45 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
IPNEDICM_02342 1.2e-63 S SIR2-like domain
IPNEDICM_02343 3.2e-10 S Domain of unknown function DUF87
IPNEDICM_02344 1.6e-30 S cog cog0433
IPNEDICM_02345 1.9e-110 F DNA/RNA non-specific endonuclease
IPNEDICM_02346 2.7e-34 S YSIRK type signal peptide
IPNEDICM_02348 5.5e-53
IPNEDICM_02349 1.8e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
IPNEDICM_02350 8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
IPNEDICM_02351 9.6e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
IPNEDICM_02352 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
IPNEDICM_02353 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
IPNEDICM_02354 0.0 FbpA K Fibronectin-binding protein
IPNEDICM_02355 1.1e-66
IPNEDICM_02356 1.3e-159 degV S EDD domain protein, DegV family
IPNEDICM_02357 1.1e-24 L Transposase
IPNEDICM_02358 1.5e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
IPNEDICM_02359 5.4e-203 xerS L Belongs to the 'phage' integrase family
IPNEDICM_02360 4.1e-67
IPNEDICM_02361 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
IPNEDICM_02362 5.8e-211 M Glycosyl hydrolases family 25
IPNEDICM_02363 2.8e-14 L PFAM transposase, IS4 family protein
IPNEDICM_02364 9.3e-86
IPNEDICM_02365 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IPNEDICM_02366 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
IPNEDICM_02367 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IPNEDICM_02368 4.4e-140 ypuA S Protein of unknown function (DUF1002)
IPNEDICM_02369 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
IPNEDICM_02370 7.3e-126 S Alpha/beta hydrolase family
IPNEDICM_02371 6.9e-122 yoaK S Protein of unknown function (DUF1275)
IPNEDICM_02372 1.3e-29 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
IPNEDICM_02373 1.3e-12 L TIGRFAM transposase, IS605 OrfB family
IPNEDICM_02374 1.2e-11 S Transposase C of IS166 homeodomain
IPNEDICM_02375 1.4e-59 XK27_01125 L IS66 Orf2 like protein
IPNEDICM_02377 4.4e-169 ppaC 3.6.1.1 C inorganic pyrophosphatase
IPNEDICM_02378 2.8e-182 K Transcriptional regulator
IPNEDICM_02379 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
IPNEDICM_02380 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
IPNEDICM_02381 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
IPNEDICM_02382 0.0 snf 2.7.11.1 KL domain protein
IPNEDICM_02383 2e-35
IPNEDICM_02385 3.8e-104 pncA Q Isochorismatase family
IPNEDICM_02386 4.9e-118
IPNEDICM_02389 3.6e-63
IPNEDICM_02390 1.4e-34
IPNEDICM_02391 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
IPNEDICM_02392 3.4e-79
IPNEDICM_02393 1e-242 cpdA S Calcineurin-like phosphoesterase
IPNEDICM_02394 3.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
IPNEDICM_02395 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
IPNEDICM_02396 1e-107 ypsA S Belongs to the UPF0398 family
IPNEDICM_02397 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
IPNEDICM_02398 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
IPNEDICM_02399 2.7e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
IPNEDICM_02400 1.3e-114 dnaD L DnaD domain protein
IPNEDICM_02401 5.8e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
IPNEDICM_02402 2.4e-89 ypmB S Protein conserved in bacteria
IPNEDICM_02403 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
IPNEDICM_02404 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
IPNEDICM_02405 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
IPNEDICM_02406 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
IPNEDICM_02407 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
IPNEDICM_02408 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
IPNEDICM_02409 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
IPNEDICM_02410 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
IPNEDICM_02411 8.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
IPNEDICM_02412 9.7e-169
IPNEDICM_02413 7.5e-143
IPNEDICM_02414 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
IPNEDICM_02415 1.4e-26
IPNEDICM_02416 6.7e-145
IPNEDICM_02417 5.1e-137
IPNEDICM_02418 4.5e-141
IPNEDICM_02419 9.6e-124 skfE V ATPases associated with a variety of cellular activities
IPNEDICM_02420 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
IPNEDICM_02421 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
IPNEDICM_02422 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
IPNEDICM_02423 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
IPNEDICM_02424 4.8e-81 mutT 3.6.1.55 F NUDIX domain
IPNEDICM_02425 1.4e-127 S Peptidase family M23
IPNEDICM_02426 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
IPNEDICM_02427 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
IPNEDICM_02428 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
IPNEDICM_02429 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
IPNEDICM_02430 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
IPNEDICM_02431 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
IPNEDICM_02432 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
IPNEDICM_02433 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
IPNEDICM_02434 3.5e-71 yqeY S YqeY-like protein
IPNEDICM_02435 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
IPNEDICM_02436 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
IPNEDICM_02437 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
IPNEDICM_02438 1.3e-116 S Peptidase family M23
IPNEDICM_02439 1.8e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IPNEDICM_02441 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
IPNEDICM_02442 9.4e-118
IPNEDICM_02443 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
IPNEDICM_02444 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
IPNEDICM_02445 2.6e-280 thrC 4.2.3.1 E Threonine synthase
IPNEDICM_02446 4.4e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
IPNEDICM_02447 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
IPNEDICM_02448 0.0 L PLD-like domain
IPNEDICM_02449 4.8e-42 S SnoaL-like domain
IPNEDICM_02450 5.4e-53 hipB K sequence-specific DNA binding
IPNEDICM_02451 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
IPNEDICM_02452 3.4e-27
IPNEDICM_02453 7.8e-52 V ABC-type multidrug transport system, ATPase and permease components
IPNEDICM_02454 2.6e-275 V ABC-type multidrug transport system, ATPase and permease components
IPNEDICM_02455 1.1e-136 L Transposase
IPNEDICM_02456 1.4e-94
IPNEDICM_02457 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
IPNEDICM_02458 9e-98
IPNEDICM_02459 4.9e-108 K LysR substrate binding domain
IPNEDICM_02460 1e-20
IPNEDICM_02461 2.3e-215 S Sterol carrier protein domain
IPNEDICM_02462 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
IPNEDICM_02463 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
IPNEDICM_02464 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
IPNEDICM_02465 5.7e-233 arcA 3.5.3.6 E Arginine
IPNEDICM_02466 9e-137 lysR5 K LysR substrate binding domain
IPNEDICM_02467 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
IPNEDICM_02468 1e-48 S Metal binding domain of Ada

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)