ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDLKFIBB_00001 3.1e-240 oppA E ABC transporter substrate-binding protein
PDLKFIBB_00002 2.1e-308 oppA E ABC transporter substrate-binding protein
PDLKFIBB_00003 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDLKFIBB_00004 0.0 smc D Required for chromosome condensation and partitioning
PDLKFIBB_00005 3.6e-161 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDLKFIBB_00006 2.5e-288 pipD E Dipeptidase
PDLKFIBB_00008 3.4e-23
PDLKFIBB_00009 4.1e-133 cysA V ABC transporter, ATP-binding protein
PDLKFIBB_00010 0.0 V FtsX-like permease family
PDLKFIBB_00011 2.7e-258 yfnA E amino acid
PDLKFIBB_00012 3.9e-54 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDLKFIBB_00013 4.9e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDLKFIBB_00014 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDLKFIBB_00015 3.4e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDLKFIBB_00016 3.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDLKFIBB_00017 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDLKFIBB_00018 4.6e-213 S SLAP domain
PDLKFIBB_00019 5.4e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
PDLKFIBB_00020 9.8e-146 E GDSL-like Lipase/Acylhydrolase family
PDLKFIBB_00021 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDLKFIBB_00022 3e-38 ynzC S UPF0291 protein
PDLKFIBB_00023 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
PDLKFIBB_00024 0.0 mdlA V ABC transporter
PDLKFIBB_00025 0.0 mdlB V ABC transporter
PDLKFIBB_00026 0.0 pepO 3.4.24.71 O Peptidase family M13
PDLKFIBB_00027 3.9e-223 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PDLKFIBB_00028 2.9e-116 plsC 2.3.1.51 I Acyltransferase
PDLKFIBB_00029 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
PDLKFIBB_00030 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
PDLKFIBB_00031 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDLKFIBB_00032 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDLKFIBB_00033 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDLKFIBB_00034 2.1e-137 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDLKFIBB_00035 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
PDLKFIBB_00036 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PDLKFIBB_00037 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDLKFIBB_00038 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDLKFIBB_00039 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
PDLKFIBB_00040 1.4e-196 nusA K Participates in both transcription termination and antitermination
PDLKFIBB_00041 8.8e-47 ylxR K Protein of unknown function (DUF448)
PDLKFIBB_00042 3.2e-47 rplGA J ribosomal protein
PDLKFIBB_00043 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDLKFIBB_00044 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDLKFIBB_00045 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDLKFIBB_00046 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDLKFIBB_00047 4.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDLKFIBB_00048 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDLKFIBB_00049 0.0 dnaK O Heat shock 70 kDa protein
PDLKFIBB_00050 2.2e-202 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDLKFIBB_00051 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDLKFIBB_00052 4.2e-180 sip L Belongs to the 'phage' integrase family
PDLKFIBB_00053 1.6e-20 S YjcQ protein
PDLKFIBB_00058 3.3e-18 S Pfam:Peptidase_M78
PDLKFIBB_00059 6.5e-23 K Cro/C1-type HTH DNA-binding domain
PDLKFIBB_00060 9.5e-12 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00061 6.7e-81 S DNA binding
PDLKFIBB_00065 2.9e-12
PDLKFIBB_00066 1.5e-95 S AntA/AntB antirepressor
PDLKFIBB_00071 7.2e-10
PDLKFIBB_00072 5e-07 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00076 6.5e-57 S Protein of unknown function (DUF1071)
PDLKFIBB_00077 9.9e-31 S Conserved phage C-terminus (Phg_2220_C)
PDLKFIBB_00078 3.2e-51 dnaC L IstB-like ATP binding protein
PDLKFIBB_00084 1.2e-40 rusA 3.1.22.4 L Endodeoxyribonuclease RusA
PDLKFIBB_00085 2.1e-14
PDLKFIBB_00094 2.7e-35 S HicB_like antitoxin of bacterial toxin-antitoxin system
PDLKFIBB_00095 5.2e-10 hicA N HicA toxin of bacterial toxin-antitoxin,
PDLKFIBB_00096 2.7e-25 L Terminase small subunit
PDLKFIBB_00097 9.8e-232 S Terminase-like family
PDLKFIBB_00098 7.6e-141 S Protein of unknown function (DUF1073)
PDLKFIBB_00099 4.9e-100 S Phage Mu protein F like protein
PDLKFIBB_00100 1.1e-07 S Lysin motif
PDLKFIBB_00101 8.7e-87 S Uncharacterized protein conserved in bacteria (DUF2213)
PDLKFIBB_00102 8.2e-60
PDLKFIBB_00103 7.1e-143 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
PDLKFIBB_00104 3.2e-31 S Protein of unknown function (DUF4054)
PDLKFIBB_00105 9.8e-75
PDLKFIBB_00106 3.6e-43
PDLKFIBB_00107 1.2e-55
PDLKFIBB_00108 5.7e-153 Z012_02110 S Protein of unknown function (DUF3383)
PDLKFIBB_00109 4e-56
PDLKFIBB_00110 6.9e-27
PDLKFIBB_00112 0.0 3.4.14.13 M Phage tail tape measure protein TP901
PDLKFIBB_00113 1.2e-58 M LysM domain
PDLKFIBB_00114 2.1e-46
PDLKFIBB_00115 5.7e-104
PDLKFIBB_00116 1.2e-48
PDLKFIBB_00117 9.5e-33
PDLKFIBB_00118 1.7e-125 Z012_12235 S Baseplate J-like protein
PDLKFIBB_00119 1.1e-08
PDLKFIBB_00120 1.6e-36
PDLKFIBB_00123 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDLKFIBB_00124 0.0 typA T GTP-binding protein TypA
PDLKFIBB_00125 5.9e-211 ftsW D Belongs to the SEDS family
PDLKFIBB_00126 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PDLKFIBB_00127 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PDLKFIBB_00128 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDLKFIBB_00129 2.4e-187 ylbL T Belongs to the peptidase S16 family
PDLKFIBB_00130 3.1e-79 comEA L Competence protein ComEA
PDLKFIBB_00131 0.0 comEC S Competence protein ComEC
PDLKFIBB_00132 8.2e-174 holA 2.7.7.7 L DNA polymerase III delta subunit
PDLKFIBB_00133 2.6e-34 rpsT J Binds directly to 16S ribosomal RNA
PDLKFIBB_00134 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDLKFIBB_00135 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDLKFIBB_00136 1.3e-148
PDLKFIBB_00137 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDLKFIBB_00138 5.8e-215 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDLKFIBB_00139 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDLKFIBB_00140 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
PDLKFIBB_00141 7.8e-39 yjeM E Amino Acid
PDLKFIBB_00142 3.4e-175 yjeM E Amino Acid
PDLKFIBB_00143 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDLKFIBB_00144 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDLKFIBB_00145 1.3e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDLKFIBB_00146 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDLKFIBB_00147 2e-219 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDLKFIBB_00148 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDLKFIBB_00149 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDLKFIBB_00150 2.7e-216 aspC 2.6.1.1 E Aminotransferase
PDLKFIBB_00151 2.6e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDLKFIBB_00152 2.1e-194 pbpX1 V Beta-lactamase
PDLKFIBB_00153 1.2e-299 I Protein of unknown function (DUF2974)
PDLKFIBB_00154 5.8e-112 ltrA S Bacterial low temperature requirement A protein (LtrA)
PDLKFIBB_00155 7.4e-120 3.6.1.55 F NUDIX domain
PDLKFIBB_00156 1.8e-243 brnQ U Component of the transport system for branched-chain amino acids
PDLKFIBB_00157 0.0 L Plasmid pRiA4b ORF-3-like protein
PDLKFIBB_00158 3.2e-65 K HxlR family
PDLKFIBB_00159 1.4e-47
PDLKFIBB_00160 1.7e-136 S Protein of unknown function (DUF805)
PDLKFIBB_00161 1.5e-155 L HNH nucleases
PDLKFIBB_00162 4.9e-119 yfbR S HD containing hydrolase-like enzyme
PDLKFIBB_00163 5.2e-177 G Glycosyl hydrolases family 8
PDLKFIBB_00164 4e-216 ydaM M Glycosyl transferase
PDLKFIBB_00166 8.1e-117
PDLKFIBB_00167 2.8e-48 S Peptidase propeptide and YPEB domain
PDLKFIBB_00168 4.8e-138 L An automated process has identified a potential problem with this gene model
PDLKFIBB_00170 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PDLKFIBB_00171 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PDLKFIBB_00172 1.8e-228 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PDLKFIBB_00173 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PDLKFIBB_00174 9.8e-135 glnQ E ABC transporter, ATP-binding protein
PDLKFIBB_00175 6.3e-288 glnP P ABC transporter permease
PDLKFIBB_00176 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PDLKFIBB_00177 5.8e-64 yeaO S Protein of unknown function, DUF488
PDLKFIBB_00178 1.3e-124 terC P Integral membrane protein TerC family
PDLKFIBB_00179 9.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PDLKFIBB_00180 8.5e-133 cobB K SIR2 family
PDLKFIBB_00181 4e-50
PDLKFIBB_00182 2.8e-100
PDLKFIBB_00183 9.9e-180
PDLKFIBB_00184 5.8e-83 S Fic/DOC family
PDLKFIBB_00185 3.3e-275 yjeM E Amino Acid
PDLKFIBB_00186 1.2e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDLKFIBB_00187 6.9e-47 mdtG EGP Major facilitator Superfamily
PDLKFIBB_00188 1.7e-152 mdtG EGP Major facilitator Superfamily
PDLKFIBB_00189 1.3e-174
PDLKFIBB_00190 2.8e-47 lysM M LysM domain
PDLKFIBB_00191 0.0 pepN 3.4.11.2 E aminopeptidase
PDLKFIBB_00192 3.8e-80 coaA 2.7.1.33 F Pantothenic acid kinase
PDLKFIBB_00193 3.2e-75 S ECF transporter, substrate-specific component
PDLKFIBB_00194 1.5e-54 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDLKFIBB_00195 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
PDLKFIBB_00196 5.8e-151 2.8.3.1 I Coenzyme A transferase
PDLKFIBB_00197 1.6e-82 2.8.3.1 I Coenzyme A transferase
PDLKFIBB_00198 7.4e-93 fabK 1.3.1.9 S Nitronate monooxygenase
PDLKFIBB_00199 0.0 XK27_08315 M Sulfatase
PDLKFIBB_00200 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDLKFIBB_00201 2.7e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDLKFIBB_00202 1.4e-98 G Aldose 1-epimerase
PDLKFIBB_00203 6.2e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDLKFIBB_00204 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDLKFIBB_00205 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDLKFIBB_00208 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PDLKFIBB_00209 1.7e-77 2.5.1.74 H UbiA prenyltransferase family
PDLKFIBB_00211 4.1e-247 3.2.1.18 GH33 M Rib/alpha-like repeat
PDLKFIBB_00212 8.8e-29
PDLKFIBB_00215 4.9e-111 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00216 2.5e-75 K Helix-turn-helix domain
PDLKFIBB_00217 1.5e-25 S CAAX protease self-immunity
PDLKFIBB_00218 1.4e-22 S CAAX protease self-immunity
PDLKFIBB_00219 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00221 1.6e-96 ybaT E Amino acid permease
PDLKFIBB_00222 1.7e-07 S LPXTG cell wall anchor motif
PDLKFIBB_00223 4.4e-146 S Putative ABC-transporter type IV
PDLKFIBB_00225 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDLKFIBB_00226 1.1e-294 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDLKFIBB_00227 2e-116 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDLKFIBB_00228 1.2e-232 oppA E ABC transporter substrate-binding protein
PDLKFIBB_00229 8.6e-97 oppA E ABC transporter substrate-binding protein
PDLKFIBB_00230 1.4e-176 K AI-2E family transporter
PDLKFIBB_00231 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PDLKFIBB_00232 4.1e-18
PDLKFIBB_00233 5.2e-248 G Major Facilitator
PDLKFIBB_00234 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
PDLKFIBB_00235 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PDLKFIBB_00236 1.7e-174 ABC-SBP S ABC transporter
PDLKFIBB_00237 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDLKFIBB_00238 1.6e-48 P CorA-like Mg2+ transporter protein
PDLKFIBB_00239 5.2e-75 P CorA-like Mg2+ transporter protein
PDLKFIBB_00240 3.5e-160 yvgN C Aldo keto reductase
PDLKFIBB_00241 0.0 tetP J elongation factor G
PDLKFIBB_00242 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
PDLKFIBB_00243 1.2e-134 EGP Major facilitator Superfamily
PDLKFIBB_00245 1.9e-117 cps1D M Domain of unknown function (DUF4422)
PDLKFIBB_00246 6.7e-110 rfbP M Bacterial sugar transferase
PDLKFIBB_00247 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
PDLKFIBB_00248 1.3e-121 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PDLKFIBB_00249 6.5e-146 epsB M biosynthesis protein
PDLKFIBB_00250 1.9e-176 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDLKFIBB_00251 0.0 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PDLKFIBB_00252 1.4e-137 licR 2.7.1.200, 2.7.1.202 G Mga helix-turn-helix domain
PDLKFIBB_00253 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PDLKFIBB_00254 8.2e-85 scrR K Periplasmic binding protein domain
PDLKFIBB_00255 3.9e-201 XK27_00915 C Luciferase-like monooxygenase
PDLKFIBB_00256 6.5e-87 K GNAT family
PDLKFIBB_00257 4.4e-123 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PDLKFIBB_00259 1.5e-36
PDLKFIBB_00260 9.5e-289 P ABC transporter
PDLKFIBB_00261 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDLKFIBB_00263 4.7e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKFIBB_00264 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
PDLKFIBB_00265 1.3e-61 M Glycosyl hydrolases family 25
PDLKFIBB_00266 2.6e-61 M Glycosyl hydrolases family 25
PDLKFIBB_00267 2.2e-85 S Protein of unknown function (DUF805)
PDLKFIBB_00268 2.3e-69 O OsmC-like protein
PDLKFIBB_00269 7.2e-209 EGP Major facilitator Superfamily
PDLKFIBB_00270 2.6e-103 sptS 2.7.13.3 T Histidine kinase
PDLKFIBB_00271 1.1e-103 sptS 2.7.13.3 T Histidine kinase
PDLKFIBB_00272 3.2e-105 K response regulator
PDLKFIBB_00273 3.4e-100 2.7.6.5 T Region found in RelA / SpoT proteins
PDLKFIBB_00274 3.5e-107 S Protein of unknown function (DUF1211)
PDLKFIBB_00275 1.4e-273 lsa S ABC transporter
PDLKFIBB_00276 2.8e-24 S Alpha beta hydrolase
PDLKFIBB_00277 1.9e-237 brnQ U Component of the transport system for branched-chain amino acids
PDLKFIBB_00278 5.5e-281 ybgG 3.2.1.170 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PDLKFIBB_00279 1.4e-150 mngA 2.7.1.195, 2.7.1.202 U system, fructose-specific IIC component
PDLKFIBB_00280 5.3e-37 mngA 2.7.1.195, 2.7.1.202 G Psort location Cytoplasmic, score 9.98
PDLKFIBB_00281 2e-42 fryA 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDLKFIBB_00282 3.9e-287 clcA P chloride
PDLKFIBB_00283 4e-32 E Zn peptidase
PDLKFIBB_00284 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00285 1.2e-44
PDLKFIBB_00286 9.1e-106 S Bacteriocin helveticin-J
PDLKFIBB_00287 3.7e-243 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PDLKFIBB_00288 5e-48 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDLKFIBB_00289 6.9e-116 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDLKFIBB_00290 9.7e-52 S Iron-sulfur cluster assembly protein
PDLKFIBB_00291 3.8e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PDLKFIBB_00292 1.3e-122 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PDLKFIBB_00293 2.1e-56 pstS P Phosphate
PDLKFIBB_00294 2e-88 pstS P Phosphate
PDLKFIBB_00295 1.9e-162 pstC P probably responsible for the translocation of the substrate across the membrane
PDLKFIBB_00296 1.2e-155 pstA P Phosphate transport system permease protein PstA
PDLKFIBB_00297 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDLKFIBB_00298 8.6e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDLKFIBB_00299 1.1e-116 phoU P Plays a role in the regulation of phosphate uptake
PDLKFIBB_00300 1.2e-88 L An automated process has identified a potential problem with this gene model
PDLKFIBB_00301 3e-12 GT2,GT4 M family 8
PDLKFIBB_00302 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDLKFIBB_00303 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDLKFIBB_00304 1.5e-139 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PDLKFIBB_00305 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
PDLKFIBB_00306 9e-26
PDLKFIBB_00307 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDLKFIBB_00308 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDLKFIBB_00309 5.7e-106 2.4.1.58 GT8 M family 8
PDLKFIBB_00310 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
PDLKFIBB_00311 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDLKFIBB_00312 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDLKFIBB_00313 1.1e-34 S Protein of unknown function (DUF2508)
PDLKFIBB_00314 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDLKFIBB_00315 8.9e-53 yaaQ S Cyclic-di-AMP receptor
PDLKFIBB_00316 1.5e-155 holB 2.7.7.7 L DNA polymerase III
PDLKFIBB_00317 1.8e-59 yabA L Involved in initiation control of chromosome replication
PDLKFIBB_00318 5.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDLKFIBB_00319 1.4e-130 fat 3.1.2.21 I Acyl-ACP thioesterase
PDLKFIBB_00320 2.2e-85 S ECF transporter, substrate-specific component
PDLKFIBB_00321 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PDLKFIBB_00322 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PDLKFIBB_00323 4.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDLKFIBB_00324 1.9e-245 L Transposase IS66 family
PDLKFIBB_00325 8.7e-34 S Transposase C of IS166 homeodomain
PDLKFIBB_00326 9.3e-64 L PFAM IS66 Orf2 family protein
PDLKFIBB_00327 7.7e-22
PDLKFIBB_00328 7e-43 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PDLKFIBB_00329 6.6e-182 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PDLKFIBB_00330 7.4e-279 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PDLKFIBB_00331 0.0 uup S ABC transporter, ATP-binding protein
PDLKFIBB_00332 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDLKFIBB_00333 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PDLKFIBB_00334 3.9e-298 V ABC transporter transmembrane region
PDLKFIBB_00335 0.0 L PLD-like domain
PDLKFIBB_00336 4.8e-42 S SnoaL-like domain
PDLKFIBB_00337 5.4e-53 hipB K sequence-specific DNA binding
PDLKFIBB_00338 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
PDLKFIBB_00339 2.3e-309 oppA3 E ABC transporter, substratebinding protein
PDLKFIBB_00340 2.4e-60 ypaA S Protein of unknown function (DUF1304)
PDLKFIBB_00341 2.1e-28 S Peptidase propeptide and YPEB domain
PDLKFIBB_00342 7.1e-237 L transposase, IS605 OrfB family
PDLKFIBB_00343 2.5e-35 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PDLKFIBB_00344 5.9e-24
PDLKFIBB_00345 1e-172 M Glycosyl hydrolases family 25
PDLKFIBB_00346 8.6e-29
PDLKFIBB_00347 7.9e-19
PDLKFIBB_00349 1.1e-07
PDLKFIBB_00350 1.1e-18 S Phage uncharacterised protein (Phage_XkdX)
PDLKFIBB_00351 1.1e-25
PDLKFIBB_00352 1.4e-34
PDLKFIBB_00353 3.6e-63
PDLKFIBB_00356 4.9e-118
PDLKFIBB_00357 3.8e-104 pncA Q Isochorismatase family
PDLKFIBB_00359 2e-35
PDLKFIBB_00360 9.2e-262 emrY EGP Major facilitator Superfamily
PDLKFIBB_00361 4.4e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDLKFIBB_00362 7.6e-239 pyrP F Permease
PDLKFIBB_00363 1.5e-102 srtA 3.4.22.70 M sortase family
PDLKFIBB_00364 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PDLKFIBB_00365 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDLKFIBB_00366 2.3e-17
PDLKFIBB_00370 6.5e-29 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PDLKFIBB_00371 1.5e-83 S N-acetylmuramoyl-L-alanine amidase activity
PDLKFIBB_00372 6.3e-77 S cog cog1373
PDLKFIBB_00373 5.6e-179 S PFAM Archaeal ATPase
PDLKFIBB_00374 4.5e-192 I transferase activity, transferring acyl groups other than amino-acyl groups
PDLKFIBB_00375 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PDLKFIBB_00376 4.3e-109 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PDLKFIBB_00377 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDLKFIBB_00378 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDLKFIBB_00379 7.8e-62 2.4.1.83 GT2 S GtrA-like protein
PDLKFIBB_00380 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PDLKFIBB_00381 1.4e-262 lmrB EGP Major facilitator Superfamily
PDLKFIBB_00382 4.2e-77 K MerR HTH family regulatory protein
PDLKFIBB_00383 3.1e-139 S Cysteine-rich secretory protein family
PDLKFIBB_00384 4.6e-274 ycaM E amino acid
PDLKFIBB_00385 2.8e-290
PDLKFIBB_00387 2.6e-189 cggR K Putative sugar-binding domain
PDLKFIBB_00388 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDLKFIBB_00389 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PDLKFIBB_00390 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDLKFIBB_00391 2.3e-198 L COG2826 Transposase and inactivated derivatives, IS30 family
PDLKFIBB_00392 1.2e-94
PDLKFIBB_00393 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PDLKFIBB_00394 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDLKFIBB_00395 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDLKFIBB_00396 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PDLKFIBB_00397 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
PDLKFIBB_00398 2e-163 murB 1.3.1.98 M Cell wall formation
PDLKFIBB_00399 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDLKFIBB_00400 1.3e-129 potB P ABC transporter permease
PDLKFIBB_00401 4.8e-127 potC P ABC transporter permease
PDLKFIBB_00402 7.3e-208 potD P ABC transporter
PDLKFIBB_00403 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDLKFIBB_00404 2e-172 ybbR S YbbR-like protein
PDLKFIBB_00405 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDLKFIBB_00406 1.4e-147 S hydrolase
PDLKFIBB_00407 1.8e-75 K Penicillinase repressor
PDLKFIBB_00408 1.6e-118
PDLKFIBB_00409 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDLKFIBB_00410 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDLKFIBB_00411 4.2e-92 S SNARE associated Golgi protein
PDLKFIBB_00412 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PDLKFIBB_00413 1.2e-168 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDLKFIBB_00414 5.3e-76 M Glycosyltransferase, group 1 family protein
PDLKFIBB_00415 5.1e-82 glfT1 1.1.1.133 S Glycosyltransferase, group 2 family protein
PDLKFIBB_00416 8.2e-44 S O-antigen ligase like membrane protein
PDLKFIBB_00418 5.5e-30
PDLKFIBB_00419 4.3e-40 S Protein of unknown function (DUF2922)
PDLKFIBB_00420 1.8e-131 S SLAP domain
PDLKFIBB_00421 8.3e-40 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDLKFIBB_00422 3e-130 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDLKFIBB_00423 3.7e-92 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PDLKFIBB_00424 1.8e-81 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PDLKFIBB_00425 1.3e-51
PDLKFIBB_00426 2.7e-57
PDLKFIBB_00427 1.6e-11
PDLKFIBB_00428 8.1e-126 S PAS domain
PDLKFIBB_00429 5.1e-48 S SLAP domain
PDLKFIBB_00430 8e-210
PDLKFIBB_00431 1.2e-18
PDLKFIBB_00432 7.3e-175 EGP Sugar (and other) transporter
PDLKFIBB_00434 7.9e-13 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PDLKFIBB_00435 1.2e-127 K LytTr DNA-binding domain
PDLKFIBB_00436 2.7e-132 2.7.13.3 T GHKL domain
PDLKFIBB_00437 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDLKFIBB_00438 1.1e-71 yslB S Protein of unknown function (DUF2507)
PDLKFIBB_00439 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDLKFIBB_00440 1.1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDLKFIBB_00441 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDLKFIBB_00442 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDLKFIBB_00443 9.1e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDLKFIBB_00444 7.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDLKFIBB_00445 3.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PDLKFIBB_00446 8.8e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDLKFIBB_00447 6.4e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDLKFIBB_00448 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDLKFIBB_00449 3.7e-250 lctP C L-lactate permease
PDLKFIBB_00450 3.1e-148 glcU U sugar transport
PDLKFIBB_00451 7.1e-46
PDLKFIBB_00452 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PDLKFIBB_00453 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDLKFIBB_00454 1e-23 S Alpha beta hydrolase
PDLKFIBB_00455 1.2e-63 S Alpha beta hydrolase
PDLKFIBB_00456 1.9e-37
PDLKFIBB_00457 7e-50
PDLKFIBB_00458 1.7e-148 S haloacid dehalogenase-like hydrolase
PDLKFIBB_00459 4.5e-291 V ABC-type multidrug transport system, ATPase and permease components
PDLKFIBB_00460 2.9e-277 V ABC-type multidrug transport system, ATPase and permease components
PDLKFIBB_00461 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
PDLKFIBB_00462 8.5e-178 I Carboxylesterase family
PDLKFIBB_00464 1e-205 M Glycosyl hydrolases family 25
PDLKFIBB_00465 4.5e-155 cinI S Serine hydrolase (FSH1)
PDLKFIBB_00466 9.8e-239 S Predicted membrane protein (DUF2207)
PDLKFIBB_00467 3.3e-42 S Predicted membrane protein (DUF2207)
PDLKFIBB_00468 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PDLKFIBB_00469 3.2e-101 3.6.1.27 I Acid phosphatase homologues
PDLKFIBB_00470 2.5e-147 yitS S Uncharacterised protein, DegV family COG1307
PDLKFIBB_00471 5.8e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDLKFIBB_00472 3.1e-229 pbuG S permease
PDLKFIBB_00473 2.5e-119 K helix_turn_helix, mercury resistance
PDLKFIBB_00474 1.2e-225 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKFIBB_00475 1.5e-31 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKFIBB_00476 3.9e-46 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKFIBB_00477 1.5e-203 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKFIBB_00479 4.1e-153 L Belongs to the 'phage' integrase family
PDLKFIBB_00481 5.5e-07 S Pfam:DUF955
PDLKFIBB_00482 2.6e-18 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00483 2.5e-264 3.6.3.6 P Cation transporter/ATPase, N-terminus
PDLKFIBB_00484 4.4e-35 3.6.3.2, 3.6.3.6 P cation transport ATPase
PDLKFIBB_00485 7.8e-10 3.6.3.2, 3.6.3.6 P cation transport ATPase
PDLKFIBB_00486 1e-78 S helix_turn_helix, Deoxyribose operon repressor
PDLKFIBB_00487 3.3e-140 repB EP Plasmid replication protein
PDLKFIBB_00488 2.2e-22
PDLKFIBB_00489 1e-30 S cog cog1373
PDLKFIBB_00490 7.6e-91 F Nucleoside 2-deoxyribosyltransferase
PDLKFIBB_00491 3.3e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PDLKFIBB_00492 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDLKFIBB_00493 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDLKFIBB_00494 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
PDLKFIBB_00495 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDLKFIBB_00496 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PDLKFIBB_00497 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PDLKFIBB_00498 1.6e-294 L Nuclease-related domain
PDLKFIBB_00499 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDLKFIBB_00500 8.3e-106 S Repeat protein
PDLKFIBB_00501 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDLKFIBB_00502 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDLKFIBB_00503 5.4e-56 XK27_04120 S Putative amino acid metabolism
PDLKFIBB_00504 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
PDLKFIBB_00505 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDLKFIBB_00506 6.7e-37
PDLKFIBB_00507 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PDLKFIBB_00508 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
PDLKFIBB_00509 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDLKFIBB_00510 2.8e-74 gpsB D DivIVA domain protein
PDLKFIBB_00511 5.7e-149 ylmH S S4 domain protein
PDLKFIBB_00512 1.7e-45 yggT S YGGT family
PDLKFIBB_00513 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDLKFIBB_00514 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDLKFIBB_00515 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDLKFIBB_00516 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDLKFIBB_00517 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDLKFIBB_00518 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDLKFIBB_00519 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDLKFIBB_00520 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PDLKFIBB_00521 1.8e-54 ftsL D Cell division protein FtsL
PDLKFIBB_00522 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDLKFIBB_00523 6.3e-78 mraZ K Belongs to the MraZ family
PDLKFIBB_00524 6.4e-54 S Protein of unknown function (DUF3397)
PDLKFIBB_00526 1.5e-152
PDLKFIBB_00527 3e-24
PDLKFIBB_00528 2.3e-120 S AAA domain, putative AbiEii toxin, Type IV TA system
PDLKFIBB_00529 1.7e-160 scrR K Periplasmic binding protein domain
PDLKFIBB_00530 5.5e-36
PDLKFIBB_00531 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDLKFIBB_00532 3.5e-32 ykzG S Belongs to the UPF0356 family
PDLKFIBB_00533 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
PDLKFIBB_00534 2e-157 S reductase
PDLKFIBB_00535 9.3e-35
PDLKFIBB_00536 3.9e-113 L PFAM Integrase catalytic
PDLKFIBB_00537 2e-57 clcA P chloride
PDLKFIBB_00538 1.2e-210 S Bacterial protein of unknown function (DUF871)
PDLKFIBB_00540 2.3e-43 ybhL S Belongs to the BI1 family
PDLKFIBB_00542 2.9e-139 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDLKFIBB_00543 2.6e-275 V ABC-type multidrug transport system, ATPase and permease components
PDLKFIBB_00544 7.8e-52 V ABC-type multidrug transport system, ATPase and permease components
PDLKFIBB_00545 2.9e-174 L Bifunctional protein
PDLKFIBB_00546 3.4e-126 1.3.5.4 C FAD binding domain
PDLKFIBB_00547 1.7e-213 1.3.5.4 C FAD binding domain
PDLKFIBB_00548 1.2e-49 L PFAM transposase, IS4 family protein
PDLKFIBB_00549 1.4e-87 L PFAM transposase, IS4 family protein
PDLKFIBB_00550 0.0 1.3.5.4 C FAD binding domain
PDLKFIBB_00551 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDLKFIBB_00552 1.7e-249 yhdP S Transporter associated domain
PDLKFIBB_00553 3.9e-119 C nitroreductase
PDLKFIBB_00554 2.1e-39
PDLKFIBB_00555 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDLKFIBB_00556 1.6e-80
PDLKFIBB_00557 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
PDLKFIBB_00558 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PDLKFIBB_00559 5.4e-147 S hydrolase
PDLKFIBB_00560 2e-160 rssA S Phospholipase, patatin family
PDLKFIBB_00561 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDLKFIBB_00562 3.1e-136 glcR K DeoR C terminal sensor domain
PDLKFIBB_00563 2.5e-59 S Enterocin A Immunity
PDLKFIBB_00564 1.2e-154 S hydrolase
PDLKFIBB_00565 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
PDLKFIBB_00566 9.1e-175 rihB 3.2.2.1 F Nucleoside
PDLKFIBB_00567 0.0 kup P Transport of potassium into the cell
PDLKFIBB_00568 1e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDLKFIBB_00569 3.5e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDLKFIBB_00570 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
PDLKFIBB_00571 1.3e-235 G Bacterial extracellular solute-binding protein
PDLKFIBB_00572 3.7e-61 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDLKFIBB_00573 1.4e-212 4.2.1.6, 5.1.2.2 M Mandelate racemase muconate lactonizing enzyme
PDLKFIBB_00574 5.2e-104
PDLKFIBB_00576 1.4e-94
PDLKFIBB_00577 5.8e-64 L Transposase
PDLKFIBB_00578 1.3e-30
PDLKFIBB_00579 3.6e-69 T Toxin-antitoxin system, toxin component, MazF family
PDLKFIBB_00580 3.7e-102 L Integrase
PDLKFIBB_00581 3e-279 L Transposase
PDLKFIBB_00582 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PDLKFIBB_00583 1.3e-149 oppA E ABC transporter substrate-binding protein
PDLKFIBB_00584 2.2e-54 oppA E ABC transporter substrate-binding protein
PDLKFIBB_00585 6.1e-227 L COG3547 Transposase and inactivated derivatives
PDLKFIBB_00586 3e-270 L Transposase DDE domain
PDLKFIBB_00587 1.5e-234 L Transposase DDE domain
PDLKFIBB_00588 1.1e-183 scrR K helix_turn _helix lactose operon repressor
PDLKFIBB_00589 3.7e-295 scrB 3.2.1.26 GH32 G invertase
PDLKFIBB_00590 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PDLKFIBB_00591 2.3e-181 M CHAP domain
PDLKFIBB_00592 3.5e-75
PDLKFIBB_00593 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDLKFIBB_00594 5.9e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDLKFIBB_00595 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDLKFIBB_00596 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDLKFIBB_00597 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDLKFIBB_00598 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDLKFIBB_00599 9.6e-41 yajC U Preprotein translocase
PDLKFIBB_00600 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDLKFIBB_00601 6.2e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDLKFIBB_00602 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PDLKFIBB_00603 2e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDLKFIBB_00604 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDLKFIBB_00605 2e-42 yrzL S Belongs to the UPF0297 family
PDLKFIBB_00606 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDLKFIBB_00607 1.1e-50 yrzB S Belongs to the UPF0473 family
PDLKFIBB_00608 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDLKFIBB_00609 3.5e-54 trxA O Belongs to the thioredoxin family
PDLKFIBB_00610 1.4e-98 L Helix-turn-helix domain
PDLKFIBB_00611 9.6e-184 L DDE superfamily endonuclease
PDLKFIBB_00612 3e-112 L PFAM transposase IS116 IS110 IS902
PDLKFIBB_00613 1.8e-79
PDLKFIBB_00614 4.6e-25 dnaQ 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PDLKFIBB_00615 4e-60 L Resolvase, N terminal domain
PDLKFIBB_00616 4.7e-26 K FCD
PDLKFIBB_00617 1.6e-60 clcA P chloride
PDLKFIBB_00618 1.4e-31 O OsmC-like protein
PDLKFIBB_00620 9.7e-231 potE E amino acid
PDLKFIBB_00621 7.9e-238 cydA 1.10.3.14 C ubiquinol oxidase
PDLKFIBB_00622 8.2e-177 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PDLKFIBB_00623 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PDLKFIBB_00624 1.9e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PDLKFIBB_00625 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PDLKFIBB_00626 2.7e-152 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDLKFIBB_00627 2e-12 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDLKFIBB_00628 1.1e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PDLKFIBB_00629 2.4e-231 ndh 1.6.99.3 C NADH dehydrogenase
PDLKFIBB_00630 6.2e-43 1.3.5.4 C FAD binding domain
PDLKFIBB_00631 2.3e-84 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDLKFIBB_00632 2.8e-168 K LysR substrate binding domain
PDLKFIBB_00633 1.1e-121 3.6.1.27 I Acid phosphatase homologues
PDLKFIBB_00634 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDLKFIBB_00635 4.7e-275 ytgP S Polysaccharide biosynthesis protein
PDLKFIBB_00636 6.3e-192 oppA E ABC transporter, substratebinding protein
PDLKFIBB_00637 1.3e-30
PDLKFIBB_00638 4.2e-145 pstS P Phosphate
PDLKFIBB_00639 1.1e-159 pstC P probably responsible for the translocation of the substrate across the membrane
PDLKFIBB_00640 1.2e-152 pstA P Phosphate transport system permease protein PstA
PDLKFIBB_00641 1.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDLKFIBB_00642 1.4e-105 phoU P Plays a role in the regulation of phosphate uptake
PDLKFIBB_00643 9.5e-121 T Transcriptional regulatory protein, C terminal
PDLKFIBB_00644 1.3e-280 phoR 2.7.13.3 T Histidine kinase
PDLKFIBB_00645 4.7e-60 S ABC-2 family transporter protein
PDLKFIBB_00646 8.2e-179 yvdE K helix_turn _helix lactose operon repressor
PDLKFIBB_00647 4.1e-36 ptp2 3.1.3.48 T Tyrosine phosphatase family
PDLKFIBB_00648 1e-105 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PDLKFIBB_00649 4.6e-88 ymdB S Macro domain protein
PDLKFIBB_00651 6.4e-88 yoaK S Protein of unknown function (DUF1275)
PDLKFIBB_00652 5.3e-17 yoaK S Protein of unknown function (DUF1275)
PDLKFIBB_00653 5.3e-175 L Transposase
PDLKFIBB_00654 3.8e-115 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PDLKFIBB_00655 6.8e-156 ypbG 2.7.1.2 GK ROK family
PDLKFIBB_00656 1e-95
PDLKFIBB_00657 3e-37
PDLKFIBB_00658 7.1e-14 K WHG domain
PDLKFIBB_00659 7.9e-82 K WHG domain
PDLKFIBB_00660 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PDLKFIBB_00661 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
PDLKFIBB_00662 6e-151 3.1.3.48 T Tyrosine phosphatase family
PDLKFIBB_00663 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDLKFIBB_00665 3e-53 cvpA S Colicin V production protein
PDLKFIBB_00666 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PDLKFIBB_00667 1.5e-147 noc K Belongs to the ParB family
PDLKFIBB_00668 3.4e-138 soj D Sporulation initiation inhibitor
PDLKFIBB_00669 8.5e-154 spo0J K Belongs to the ParB family
PDLKFIBB_00670 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
PDLKFIBB_00671 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDLKFIBB_00672 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
PDLKFIBB_00673 1.2e-145 V ABC transporter, ATP-binding protein
PDLKFIBB_00674 4.2e-144 V ABC transporter, ATP-binding protein
PDLKFIBB_00675 0.0 V ABC transporter
PDLKFIBB_00677 9.6e-121 K response regulator
PDLKFIBB_00678 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PDLKFIBB_00679 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDLKFIBB_00680 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PDLKFIBB_00681 1.4e-53 S Enterocin A Immunity
PDLKFIBB_00682 2.5e-33
PDLKFIBB_00683 9.5e-26
PDLKFIBB_00684 1e-24
PDLKFIBB_00685 4e-175 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PDLKFIBB_00686 3.4e-38 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PDLKFIBB_00687 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PDLKFIBB_00688 2.1e-255 S Archaea bacterial proteins of unknown function
PDLKFIBB_00689 1.2e-16
PDLKFIBB_00690 1.3e-125 S Uncharacterised protein family (UPF0236)
PDLKFIBB_00691 1.4e-140 L An automated process has identified a potential problem with this gene model
PDLKFIBB_00692 1.6e-77 ybhL S Belongs to the BI1 family
PDLKFIBB_00693 3.8e-139 pnuC H nicotinamide mononucleotide transporter
PDLKFIBB_00694 5.6e-65 L PFAM transposase IS116 IS110 IS902
PDLKFIBB_00695 1.1e-20 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00696 5.5e-148 S cog cog1373
PDLKFIBB_00697 0.0 4.2.1.53 S Myosin-crossreactive antigen
PDLKFIBB_00698 2e-91 yxdD K Bacterial regulatory proteins, tetR family
PDLKFIBB_00699 1.9e-259 emrY EGP Major facilitator Superfamily
PDLKFIBB_00704 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
PDLKFIBB_00705 4.9e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDLKFIBB_00706 6.3e-201 pbpX V Beta-lactamase
PDLKFIBB_00707 2.8e-244 nhaC C Na H antiporter NhaC
PDLKFIBB_00708 1.4e-147 I transferase activity, transferring acyl groups other than amino-acyl groups
PDLKFIBB_00709 2.6e-57
PDLKFIBB_00710 4.3e-108 ybhL S Belongs to the BI1 family
PDLKFIBB_00711 2.7e-171 yegS 2.7.1.107 G Lipid kinase
PDLKFIBB_00712 2.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDLKFIBB_00713 2.9e-268 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDLKFIBB_00714 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDLKFIBB_00715 5.8e-203 camS S sex pheromone
PDLKFIBB_00716 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDLKFIBB_00717 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PDLKFIBB_00718 5.2e-84 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PDLKFIBB_00720 4.1e-83 ydcK S Belongs to the SprT family
PDLKFIBB_00721 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
PDLKFIBB_00722 6e-258 epsU S Polysaccharide biosynthesis protein
PDLKFIBB_00723 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDLKFIBB_00724 0.0 pacL 3.6.3.8 P P-type ATPase
PDLKFIBB_00725 1.4e-204 tnpB L Putative transposase DNA-binding domain
PDLKFIBB_00726 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDLKFIBB_00727 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDLKFIBB_00728 1.7e-204 csaB M Glycosyl transferases group 1
PDLKFIBB_00729 2.1e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PDLKFIBB_00730 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PDLKFIBB_00731 4.6e-123 gntR1 K UTRA
PDLKFIBB_00732 3.3e-179
PDLKFIBB_00733 3.4e-45 oppA2 E ABC transporter, substratebinding protein
PDLKFIBB_00734 4.4e-239 oppA2 E ABC transporter, substratebinding protein
PDLKFIBB_00737 2.7e-239 npr 1.11.1.1 C NADH oxidase
PDLKFIBB_00738 6.6e-11
PDLKFIBB_00739 1.3e-22 3.6.4.12 S transposase or invertase
PDLKFIBB_00740 6e-163 slpX S SLAP domain
PDLKFIBB_00741 4.8e-44 slpX S SLAP domain
PDLKFIBB_00742 4.4e-144 K SIS domain
PDLKFIBB_00743 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PDLKFIBB_00744 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PDLKFIBB_00745 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PDLKFIBB_00747 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PDLKFIBB_00749 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PDLKFIBB_00750 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PDLKFIBB_00751 2.6e-89 G Histidine phosphatase superfamily (branch 1)
PDLKFIBB_00752 1.2e-105 G Phosphoglycerate mutase family
PDLKFIBB_00753 4.7e-159 D nuclear chromosome segregation
PDLKFIBB_00754 5.8e-78 M LysM domain protein
PDLKFIBB_00755 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKFIBB_00756 4.1e-78 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKFIBB_00757 1.5e-16 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKFIBB_00758 6.2e-12
PDLKFIBB_00759 2.3e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PDLKFIBB_00760 2.3e-30
PDLKFIBB_00762 2.9e-69 S Iron-sulphur cluster biosynthesis
PDLKFIBB_00763 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
PDLKFIBB_00764 6.2e-59 psiE S Phosphate-starvation-inducible E
PDLKFIBB_00766 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PDLKFIBB_00767 4.3e-228 amtB P ammonium transporter
PDLKFIBB_00768 1.4e-60
PDLKFIBB_00769 0.0 lhr L DEAD DEAH box helicase
PDLKFIBB_00770 1.4e-245 P P-loop Domain of unknown function (DUF2791)
PDLKFIBB_00771 2.6e-138 S TerB-C domain
PDLKFIBB_00772 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDLKFIBB_00773 6.2e-213 iscS2 2.8.1.7 E Aminotransferase class V
PDLKFIBB_00774 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDLKFIBB_00775 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDLKFIBB_00776 1.3e-84 yueI S Protein of unknown function (DUF1694)
PDLKFIBB_00777 6.3e-238 rarA L recombination factor protein RarA
PDLKFIBB_00778 8.4e-39
PDLKFIBB_00779 1.8e-78 usp6 T universal stress protein
PDLKFIBB_00780 4.7e-216 rodA D Belongs to the SEDS family
PDLKFIBB_00781 3.3e-33 S Protein of unknown function (DUF2969)
PDLKFIBB_00782 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PDLKFIBB_00783 1.2e-177 mbl D Cell shape determining protein MreB Mrl
PDLKFIBB_00784 2e-30 ywzB S Protein of unknown function (DUF1146)
PDLKFIBB_00785 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDLKFIBB_00786 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDLKFIBB_00787 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDLKFIBB_00788 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDLKFIBB_00789 1.3e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDLKFIBB_00790 4.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDLKFIBB_00791 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDLKFIBB_00792 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PDLKFIBB_00793 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDLKFIBB_00794 1.9e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDLKFIBB_00795 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDLKFIBB_00796 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDLKFIBB_00797 1.7e-113 tdk 2.7.1.21 F thymidine kinase
PDLKFIBB_00798 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PDLKFIBB_00799 3.8e-48 M LysM domain protein
PDLKFIBB_00800 2.9e-15 M LysM domain protein
PDLKFIBB_00801 1.5e-102 GM NmrA-like family
PDLKFIBB_00802 6e-85 hipB K Helix-turn-helix
PDLKFIBB_00803 1.8e-73 C nitroreductase
PDLKFIBB_00804 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
PDLKFIBB_00805 5.6e-86
PDLKFIBB_00806 1.1e-164 S Protein of unknown function (DUF2974)
PDLKFIBB_00807 4.7e-109 glnP P ABC transporter permease
PDLKFIBB_00808 3.7e-90 gluC P ABC transporter permease
PDLKFIBB_00809 1.2e-146 glnH ET ABC transporter substrate-binding protein
PDLKFIBB_00810 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDLKFIBB_00811 3.8e-46 udk 2.7.1.48 F Zeta toxin
PDLKFIBB_00812 9.8e-39 udk 2.7.1.48 F Zeta toxin
PDLKFIBB_00813 1e-246 G MFS/sugar transport protein
PDLKFIBB_00814 1.6e-100 S ABC-type cobalt transport system, permease component
PDLKFIBB_00815 0.0 V ABC transporter transmembrane region
PDLKFIBB_00816 6.9e-309 XK27_09600 V ABC transporter, ATP-binding protein
PDLKFIBB_00817 1.4e-80 K Transcriptional regulator, MarR family
PDLKFIBB_00818 1.9e-147 glnH ET ABC transporter
PDLKFIBB_00819 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
PDLKFIBB_00820 8.6e-243 steT E amino acid
PDLKFIBB_00821 2.4e-26 steT E amino acid
PDLKFIBB_00822 2.8e-202 steT E amino acid
PDLKFIBB_00823 2.7e-138
PDLKFIBB_00824 5.9e-174 S Aldo keto reductase
PDLKFIBB_00825 2.2e-311 ybiT S ABC transporter, ATP-binding protein
PDLKFIBB_00826 5.5e-149 pepA E M42 glutamyl aminopeptidase
PDLKFIBB_00828 1.2e-47 L Transposase, IS116 IS110 IS902 family
PDLKFIBB_00829 6.3e-33 S Domain of unknown function (DUF4767)
PDLKFIBB_00830 0.0 fhaB M Rib/alpha-like repeat
PDLKFIBB_00831 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PDLKFIBB_00832 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PDLKFIBB_00833 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PDLKFIBB_00834 9e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PDLKFIBB_00835 6.8e-209 msmX P Belongs to the ABC transporter superfamily
PDLKFIBB_00836 1.3e-213 malE G Bacterial extracellular solute-binding protein
PDLKFIBB_00837 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
PDLKFIBB_00838 3.3e-147 malG P ABC transporter permease
PDLKFIBB_00839 9.6e-67 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00841 5.4e-60 L Resolvase, N-terminal
PDLKFIBB_00842 9.7e-167 L Putative transposase DNA-binding domain
PDLKFIBB_00844 4.8e-28
PDLKFIBB_00847 2.3e-133 S Protein of unknown function (DUF975)
PDLKFIBB_00848 2.7e-137 lysA2 M Glycosyl hydrolases family 25
PDLKFIBB_00849 7.9e-291 ytgP S Polysaccharide biosynthesis protein
PDLKFIBB_00850 1.9e-36
PDLKFIBB_00851 0.0 XK27_06780 V ABC transporter permease
PDLKFIBB_00852 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
PDLKFIBB_00853 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKFIBB_00854 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKFIBB_00855 0.0 clpE O AAA domain (Cdc48 subfamily)
PDLKFIBB_00856 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDLKFIBB_00857 9.7e-234 cycA E Amino acid permease
PDLKFIBB_00858 9.2e-248 yifK E Amino acid permease
PDLKFIBB_00859 6.4e-135 S PFAM Archaeal ATPase
PDLKFIBB_00860 2.4e-172 V HNH endonuclease
PDLKFIBB_00862 2.2e-139 puuD S peptidase C26
PDLKFIBB_00863 1.8e-230 steT_1 E amino acid
PDLKFIBB_00864 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
PDLKFIBB_00865 1.6e-108
PDLKFIBB_00866 1.6e-97 3.1.4.37 S AAA domain
PDLKFIBB_00867 1.4e-67 S Sel1-like repeats.
PDLKFIBB_00869 2.6e-105 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PDLKFIBB_00870 5.5e-53
PDLKFIBB_00871 9.1e-282 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PDLKFIBB_00872 2.8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDLKFIBB_00873 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDLKFIBB_00874 2.3e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDLKFIBB_00875 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PDLKFIBB_00876 0.0 FbpA K Fibronectin-binding protein
PDLKFIBB_00877 1.1e-66
PDLKFIBB_00878 2.3e-159 degV S EDD domain protein, DegV family
PDLKFIBB_00879 3.3e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDLKFIBB_00880 1.8e-203 xerS L Belongs to the 'phage' integrase family
PDLKFIBB_00881 4.1e-67
PDLKFIBB_00882 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
PDLKFIBB_00883 1.5e-211 M Glycosyl hydrolases family 25
PDLKFIBB_00884 2e-39 S Transglycosylase associated protein
PDLKFIBB_00887 4e-20 L PFAM transposase, IS4 family protein
PDLKFIBB_00888 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PDLKFIBB_00889 1.2e-100 treR K UTRA
PDLKFIBB_00890 4.5e-111 treB G phosphotransferase system
PDLKFIBB_00891 6.8e-153 treB G phosphotransferase system
PDLKFIBB_00892 8.2e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDLKFIBB_00893 1.9e-191 yrvN L AAA C-terminal domain
PDLKFIBB_00894 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDLKFIBB_00895 9e-83 K Acetyltransferase (GNAT) domain
PDLKFIBB_00896 1.3e-229 S Putative peptidoglycan binding domain
PDLKFIBB_00897 7.5e-95 S ECF-type riboflavin transporter, S component
PDLKFIBB_00898 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PDLKFIBB_00899 9.3e-204 pbpX1 V Beta-lactamase
PDLKFIBB_00900 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
PDLKFIBB_00901 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDLKFIBB_00902 7.4e-205 L COG2826 Transposase and inactivated derivatives, IS30 family
PDLKFIBB_00903 2.1e-114 3.6.1.27 I Acid phosphatase homologues
PDLKFIBB_00904 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PDLKFIBB_00905 0.0 uvrA3 L excinuclease ABC, A subunit
PDLKFIBB_00906 9.9e-82 C Flavodoxin
PDLKFIBB_00907 4.1e-172 L COG3385 FOG Transposase and inactivated derivatives
PDLKFIBB_00908 1.6e-105 tag 3.2.2.20 L glycosylase
PDLKFIBB_00909 3.9e-84
PDLKFIBB_00910 1.6e-271 S Calcineurin-like phosphoesterase
PDLKFIBB_00911 0.0 asnB 6.3.5.4 E Asparagine synthase
PDLKFIBB_00912 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
PDLKFIBB_00913 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PDLKFIBB_00914 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDLKFIBB_00915 6.2e-103 S Iron-sulfur cluster assembly protein
PDLKFIBB_00916 1.5e-230 XK27_04775 S PAS domain
PDLKFIBB_00917 1.4e-210 yttB EGP Major facilitator Superfamily
PDLKFIBB_00918 0.0 pepO 3.4.24.71 O Peptidase family M13
PDLKFIBB_00919 0.0 kup P Transport of potassium into the cell
PDLKFIBB_00920 7.3e-74
PDLKFIBB_00921 2.1e-45 S PFAM Archaeal ATPase
PDLKFIBB_00923 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PDLKFIBB_00924 5.9e-45
PDLKFIBB_00925 2.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PDLKFIBB_00926 1.7e-129 manY G PTS system
PDLKFIBB_00927 1e-173 manN G system, mannose fructose sorbose family IID component
PDLKFIBB_00928 1.1e-62 manO S Domain of unknown function (DUF956)
PDLKFIBB_00929 3.3e-158 K Transcriptional regulator
PDLKFIBB_00930 1.3e-85 maa S transferase hexapeptide repeat
PDLKFIBB_00931 9.8e-242 cycA E Amino acid permease
PDLKFIBB_00932 3.9e-125 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDLKFIBB_00933 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDLKFIBB_00934 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDLKFIBB_00935 0.0 mtlR K Mga helix-turn-helix domain
PDLKFIBB_00936 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PDLKFIBB_00937 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKFIBB_00938 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PDLKFIBB_00939 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
PDLKFIBB_00940 2.3e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
PDLKFIBB_00941 2.1e-32
PDLKFIBB_00942 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PDLKFIBB_00943 2.3e-156 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00944 2.8e-65 K LytTr DNA-binding domain
PDLKFIBB_00945 3.1e-44 S Protein of unknown function (DUF3021)
PDLKFIBB_00946 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PDLKFIBB_00947 3.3e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDLKFIBB_00948 6e-132 S membrane transporter protein
PDLKFIBB_00949 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
PDLKFIBB_00950 7.3e-161 czcD P cation diffusion facilitator family transporter
PDLKFIBB_00951 1.4e-23
PDLKFIBB_00952 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDLKFIBB_00953 5.4e-183 S AAA domain
PDLKFIBB_00954 7.3e-44
PDLKFIBB_00955 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
PDLKFIBB_00956 4.1e-52
PDLKFIBB_00957 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PDLKFIBB_00958 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDLKFIBB_00959 3.3e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDLKFIBB_00960 5.2e-278 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDLKFIBB_00961 5.1e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDLKFIBB_00962 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDLKFIBB_00963 4.2e-95 sigH K Belongs to the sigma-70 factor family
PDLKFIBB_00964 1.7e-34
PDLKFIBB_00965 6e-79 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PDLKFIBB_00966 1.6e-185 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PDLKFIBB_00967 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDLKFIBB_00968 2.2e-129 blpT
PDLKFIBB_00972 3e-21
PDLKFIBB_00973 3.7e-83
PDLKFIBB_00974 8.2e-31 yozG K Transcriptional regulator
PDLKFIBB_00975 2e-23
PDLKFIBB_00976 1.7e-67
PDLKFIBB_00977 1.1e-164 natA S ABC transporter, ATP-binding protein
PDLKFIBB_00978 1.8e-218 natB CP ABC-2 family transporter protein
PDLKFIBB_00979 1.8e-136 fruR K DeoR C terminal sensor domain
PDLKFIBB_00980 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PDLKFIBB_00981 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PDLKFIBB_00982 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDLKFIBB_00983 1.6e-147 psaA P Belongs to the bacterial solute-binding protein 9 family
PDLKFIBB_00984 1.6e-117 fhuC P ABC transporter
PDLKFIBB_00985 5e-129 znuB U ABC 3 transport family
PDLKFIBB_00986 2e-264 lctP C L-lactate permease
PDLKFIBB_00987 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDLKFIBB_00988 1.5e-216 2.1.1.14 E methionine synthase, vitamin-B12 independent
PDLKFIBB_00989 1.2e-11
PDLKFIBB_00990 1.6e-25 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_00992 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
PDLKFIBB_00993 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDLKFIBB_00994 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDLKFIBB_00995 1.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PDLKFIBB_00996 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDLKFIBB_00997 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDLKFIBB_00998 3.4e-71 yqhY S Asp23 family, cell envelope-related function
PDLKFIBB_00999 1.1e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDLKFIBB_01000 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDLKFIBB_01001 2.9e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDLKFIBB_01002 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDLKFIBB_01003 1e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDLKFIBB_01004 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDLKFIBB_01005 2.6e-300 recN L May be involved in recombinational repair of damaged DNA
PDLKFIBB_01006 1.1e-77 6.3.3.2 S ASCH
PDLKFIBB_01007 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PDLKFIBB_01008 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDLKFIBB_01009 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDLKFIBB_01010 5.7e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDLKFIBB_01011 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDLKFIBB_01012 1.1e-138 stp 3.1.3.16 T phosphatase
PDLKFIBB_01013 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PDLKFIBB_01014 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDLKFIBB_01015 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PDLKFIBB_01016 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
PDLKFIBB_01017 1.4e-30
PDLKFIBB_01018 3.3e-102 L Belongs to the 'phage' integrase family
PDLKFIBB_01020 1.7e-15 E Pfam:DUF955
PDLKFIBB_01022 6.2e-18 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_01023 2.2e-100 K ORF6N domain
PDLKFIBB_01024 2.4e-47
PDLKFIBB_01029 2.4e-71 S AAA domain
PDLKFIBB_01031 6e-143 res L Helicase C-terminal domain protein
PDLKFIBB_01033 2.6e-39 S Protein of unknown function (DUF669)
PDLKFIBB_01034 1.3e-09
PDLKFIBB_01035 6.8e-09 S HNH endonuclease
PDLKFIBB_01036 1.1e-274 S Phage plasmid primase, P4
PDLKFIBB_01039 5.9e-26 S Domain of Unknown Function (DUF1599)
PDLKFIBB_01040 7e-38 S VRR-NUC domain
PDLKFIBB_01042 1.4e-10
PDLKFIBB_01043 1.5e-13 arpU S Phage transcriptional regulator, ArpU family
PDLKFIBB_01045 2.7e-49 S HNH endonuclease
PDLKFIBB_01046 4.2e-56 S Phage terminase, small subunit
PDLKFIBB_01048 1.7e-212 S Phage Terminase
PDLKFIBB_01050 2.2e-133 S Phage portal protein
PDLKFIBB_01051 1.9e-87 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PDLKFIBB_01052 1.6e-52 S peptidase activity
PDLKFIBB_01053 5.5e-19 S Phage gp6-like head-tail connector protein
PDLKFIBB_01055 2.8e-12 S Bacteriophage HK97-gp10, putative tail-component
PDLKFIBB_01057 1.2e-12 S Pfam:Phage_TTP_1
PDLKFIBB_01060 5.2e-133 M Phage tail tape measure protein TP901
PDLKFIBB_01061 1.1e-32 S phage tail
PDLKFIBB_01062 4.3e-142 S Phage minor structural protein
PDLKFIBB_01064 6.9e-08 S Domain of unknown function (DUF2479)
PDLKFIBB_01065 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PDLKFIBB_01066 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDLKFIBB_01067 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
PDLKFIBB_01068 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDLKFIBB_01069 3.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDLKFIBB_01070 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDLKFIBB_01071 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDLKFIBB_01072 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDLKFIBB_01073 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDLKFIBB_01074 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PDLKFIBB_01075 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDLKFIBB_01076 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDLKFIBB_01077 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDLKFIBB_01078 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDLKFIBB_01079 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDLKFIBB_01080 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDLKFIBB_01081 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDLKFIBB_01082 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDLKFIBB_01083 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDLKFIBB_01084 2.3e-24 rpmD J Ribosomal protein L30
PDLKFIBB_01085 2.6e-71 rplO J Binds to the 23S rRNA
PDLKFIBB_01086 9e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDLKFIBB_01087 1e-119 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDLKFIBB_01088 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDLKFIBB_01089 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PDLKFIBB_01090 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDLKFIBB_01091 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDLKFIBB_01092 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDLKFIBB_01093 1.4e-60 rplQ J Ribosomal protein L17
PDLKFIBB_01094 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDLKFIBB_01095 3.5e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDLKFIBB_01096 8.5e-137 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDLKFIBB_01097 4.8e-148 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDLKFIBB_01098 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDLKFIBB_01099 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
PDLKFIBB_01100 8.9e-133 L Phage integrase family
PDLKFIBB_01101 1.8e-163
PDLKFIBB_01102 7.8e-26 K Acetyltransferase (GNAT) domain
PDLKFIBB_01104 0.0 ydgH S MMPL family
PDLKFIBB_01105 6.6e-99 yobS K Bacterial regulatory proteins, tetR family
PDLKFIBB_01106 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
PDLKFIBB_01107 1.8e-154 corA P CorA-like Mg2+ transporter protein
PDLKFIBB_01108 2.3e-240 G Bacterial extracellular solute-binding protein
PDLKFIBB_01109 9.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PDLKFIBB_01110 1.8e-145 gtsC P Binding-protein-dependent transport system inner membrane component
PDLKFIBB_01111 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
PDLKFIBB_01112 1.9e-203 malK P ATPases associated with a variety of cellular activities
PDLKFIBB_01113 1.3e-281 pipD E Dipeptidase
PDLKFIBB_01114 1.9e-158 endA F DNA RNA non-specific endonuclease
PDLKFIBB_01115 8e-182 dnaQ 2.7.7.7 L EXOIII
PDLKFIBB_01116 9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PDLKFIBB_01117 3e-116 yviA S Protein of unknown function (DUF421)
PDLKFIBB_01118 1.1e-56 S Protein of unknown function (DUF3290)
PDLKFIBB_01119 4e-98 rihB 3.2.2.1 F Nucleoside
PDLKFIBB_01120 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDLKFIBB_01121 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PDLKFIBB_01122 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDLKFIBB_01123 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PDLKFIBB_01124 8.6e-199 tnpB L Putative transposase DNA-binding domain
PDLKFIBB_01125 4.2e-84 yqeG S HAD phosphatase, family IIIA
PDLKFIBB_01126 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
PDLKFIBB_01127 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDLKFIBB_01128 6.6e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PDLKFIBB_01129 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDLKFIBB_01130 4.6e-216 ylbM S Belongs to the UPF0348 family
PDLKFIBB_01131 4.7e-97 yceD S Uncharacterized ACR, COG1399
PDLKFIBB_01132 1.2e-126 K response regulator
PDLKFIBB_01133 1.3e-277 arlS 2.7.13.3 T Histidine kinase
PDLKFIBB_01134 1e-12
PDLKFIBB_01135 1.5e-97 S CAAX protease self-immunity
PDLKFIBB_01136 6.1e-224 S SLAP domain
PDLKFIBB_01137 5.7e-83 S Aminoacyl-tRNA editing domain
PDLKFIBB_01138 2.4e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDLKFIBB_01139 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PDLKFIBB_01140 2.2e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDLKFIBB_01141 4.5e-58 yodB K Transcriptional regulator, HxlR family
PDLKFIBB_01143 1.4e-86 C Aldo keto reductase
PDLKFIBB_01144 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
PDLKFIBB_01145 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PDLKFIBB_01146 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PDLKFIBB_01147 5e-141 xerC D Phage integrase, N-terminal SAM-like domain
PDLKFIBB_01148 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PDLKFIBB_01149 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDLKFIBB_01150 5.8e-152 dprA LU DNA protecting protein DprA
PDLKFIBB_01151 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDLKFIBB_01152 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDLKFIBB_01153 1.9e-94 yjcE P Sodium proton antiporter
PDLKFIBB_01154 1.5e-40 yjcE P Sodium proton antiporter
PDLKFIBB_01155 1.1e-66 yjcE P NhaP-type Na H and K H
PDLKFIBB_01156 7.1e-36 yozE S Belongs to the UPF0346 family
PDLKFIBB_01157 2e-144 DegV S Uncharacterised protein, DegV family COG1307
PDLKFIBB_01158 1.2e-107 hlyIII S protein, hemolysin III
PDLKFIBB_01159 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDLKFIBB_01160 8.8e-159 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDLKFIBB_01161 4.3e-86 3.4.21.96 S SLAP domain
PDLKFIBB_01162 8.4e-128 yagE E Amino acid permease
PDLKFIBB_01163 9.7e-65 yagE E amino acid
PDLKFIBB_01164 4.2e-172 2.7.1.2 GK ROK family
PDLKFIBB_01165 5.6e-43
PDLKFIBB_01166 3.6e-268 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDLKFIBB_01167 6.9e-69 S Domain of unknown function (DUF1934)
PDLKFIBB_01168 1.5e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDLKFIBB_01169 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDLKFIBB_01170 9.6e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDLKFIBB_01171 1.8e-74 K acetyltransferase
PDLKFIBB_01172 5.7e-285 pipD E Dipeptidase
PDLKFIBB_01173 2.5e-152 msmR K AraC-like ligand binding domain
PDLKFIBB_01174 1.4e-226 pbuX F xanthine permease
PDLKFIBB_01175 9e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDLKFIBB_01176 2.4e-43 K Helix-turn-helix
PDLKFIBB_01177 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDLKFIBB_01179 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDLKFIBB_01180 9.1e-54 papP P ABC transporter, permease protein
PDLKFIBB_01181 5.3e-116 P ABC transporter permease
PDLKFIBB_01182 1.5e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDLKFIBB_01183 1e-156 cjaA ET ABC transporter substrate-binding protein
PDLKFIBB_01184 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDLKFIBB_01185 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDLKFIBB_01186 2e-61 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDLKFIBB_01187 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PDLKFIBB_01188 7.1e-158 metQ1 P Belongs to the nlpA lipoprotein family
PDLKFIBB_01189 1.9e-25
PDLKFIBB_01190 0.0 mco Q Multicopper oxidase
PDLKFIBB_01191 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
PDLKFIBB_01192 0.0 oppA E ABC transporter
PDLKFIBB_01193 8.4e-229 Q Imidazolonepropionase and related amidohydrolases
PDLKFIBB_01194 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
PDLKFIBB_01195 1e-137 S Protein of unknown function (DUF3100)
PDLKFIBB_01196 9.7e-83 S An automated process has identified a potential problem with this gene model
PDLKFIBB_01197 6e-112
PDLKFIBB_01199 1.7e-110 E Belongs to the SOS response-associated peptidase family
PDLKFIBB_01200 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDLKFIBB_01201 4e-89 comEB 3.5.4.12 F MafB19-like deaminase
PDLKFIBB_01202 2e-103 S TPM domain
PDLKFIBB_01203 2.4e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PDLKFIBB_01204 2.5e-311 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PDLKFIBB_01205 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDLKFIBB_01206 1e-147 tatD L hydrolase, TatD family
PDLKFIBB_01207 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDLKFIBB_01208 6.7e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDLKFIBB_01209 4.5e-39 veg S Biofilm formation stimulator VEG
PDLKFIBB_01210 1.5e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PDLKFIBB_01211 2.6e-173 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDLKFIBB_01212 5.3e-80
PDLKFIBB_01213 7.3e-290 S SLAP domain
PDLKFIBB_01214 6e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDLKFIBB_01215 5.4e-13
PDLKFIBB_01216 4.1e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDLKFIBB_01217 0.0 G Belongs to the glycosyl hydrolase 31 family
PDLKFIBB_01218 2.5e-144 I alpha/beta hydrolase fold
PDLKFIBB_01219 4.9e-129 yibF S overlaps another CDS with the same product name
PDLKFIBB_01220 6.3e-202 yibE S overlaps another CDS with the same product name
PDLKFIBB_01221 1.4e-112
PDLKFIBB_01222 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDLKFIBB_01223 6.4e-224 S Cysteine-rich secretory protein family
PDLKFIBB_01224 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDLKFIBB_01225 1.3e-258 glnPH2 P ABC transporter permease
PDLKFIBB_01226 2.8e-135
PDLKFIBB_01227 7.1e-124 luxT K Bacterial regulatory proteins, tetR family
PDLKFIBB_01228 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDLKFIBB_01229 5.6e-36
PDLKFIBB_01230 1.4e-206 pepC 3.4.22.40 E Peptidase C1-like family
PDLKFIBB_01231 1.5e-32 pepC 3.4.22.40 E Peptidase C1-like family
PDLKFIBB_01232 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDLKFIBB_01233 1.9e-261 frdC 1.3.5.4 C FAD binding domain
PDLKFIBB_01234 1.5e-266 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDLKFIBB_01235 2e-73 metI P ABC transporter permease
PDLKFIBB_01236 3e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDLKFIBB_01237 2e-160 metQ2 P Belongs to the nlpA lipoprotein family
PDLKFIBB_01238 1.9e-175 F DNA/RNA non-specific endonuclease
PDLKFIBB_01239 0.0 aha1 P E1-E2 ATPase
PDLKFIBB_01240 2.2e-90 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDLKFIBB_01241 9.1e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDLKFIBB_01242 1.9e-248 yifK E Amino acid permease
PDLKFIBB_01243 1.2e-264 V ABC-type multidrug transport system, ATPase and permease components
PDLKFIBB_01245 5.3e-41
PDLKFIBB_01246 1.4e-76 K DNA-templated transcription, initiation
PDLKFIBB_01247 1.1e-25
PDLKFIBB_01248 4.3e-145 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDLKFIBB_01250 1e-19 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDLKFIBB_01251 7e-99 S SLAP domain
PDLKFIBB_01253 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDLKFIBB_01254 6.5e-180 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PDLKFIBB_01255 0.0 yjbQ P TrkA C-terminal domain protein
PDLKFIBB_01256 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PDLKFIBB_01257 2.1e-161 S Oxidoreductase family, NAD-binding Rossmann fold
PDLKFIBB_01258 2.1e-130
PDLKFIBB_01259 2.1e-116
PDLKFIBB_01260 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDLKFIBB_01261 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
PDLKFIBB_01262 4.9e-111 ybbL S ABC transporter, ATP-binding protein
PDLKFIBB_01263 0.0 S SH3-like domain
PDLKFIBB_01264 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDLKFIBB_01265 2.1e-171 whiA K May be required for sporulation
PDLKFIBB_01266 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PDLKFIBB_01267 6.2e-165 rapZ S Displays ATPase and GTPase activities
PDLKFIBB_01268 4.1e-90 S Short repeat of unknown function (DUF308)
PDLKFIBB_01269 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDLKFIBB_01270 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDLKFIBB_01271 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDLKFIBB_01272 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDLKFIBB_01273 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PDLKFIBB_01274 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDLKFIBB_01275 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDLKFIBB_01276 5.1e-17
PDLKFIBB_01277 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDLKFIBB_01278 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDLKFIBB_01279 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDLKFIBB_01280 9.4e-132 comFC S Competence protein
PDLKFIBB_01281 4.7e-246 comFA L Helicase C-terminal domain protein
PDLKFIBB_01282 5.1e-119 yvyE 3.4.13.9 S YigZ family
PDLKFIBB_01283 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
PDLKFIBB_01284 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
PDLKFIBB_01285 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDLKFIBB_01286 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDLKFIBB_01287 5.2e-97 ymfM S Helix-turn-helix domain
PDLKFIBB_01288 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
PDLKFIBB_01289 1.9e-236 S Peptidase M16
PDLKFIBB_01290 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PDLKFIBB_01291 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PDLKFIBB_01292 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
PDLKFIBB_01293 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDLKFIBB_01294 2.6e-214 yubA S AI-2E family transporter
PDLKFIBB_01295 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDLKFIBB_01296 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PDLKFIBB_01297 1.2e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDLKFIBB_01298 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PDLKFIBB_01299 1.1e-220 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDLKFIBB_01300 0.0 lacZ 3.2.1.23 G -beta-galactosidase
PDLKFIBB_01301 2.6e-103 lacS G Transporter
PDLKFIBB_01302 8.9e-207 lacS G Transporter
PDLKFIBB_01303 5.4e-165 lacR K Transcriptional regulator
PDLKFIBB_01304 7.2e-221 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PDLKFIBB_01305 9.3e-80 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PDLKFIBB_01306 2.1e-142 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PDLKFIBB_01307 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDLKFIBB_01308 7.6e-163 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
PDLKFIBB_01309 2e-106 K Transcriptional regulator, AbiEi antitoxin
PDLKFIBB_01310 1.2e-188 K Periplasmic binding protein-like domain
PDLKFIBB_01311 2.8e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDLKFIBB_01312 4.8e-34 S reductase
PDLKFIBB_01313 4.4e-39 S reductase
PDLKFIBB_01314 2.7e-32 S reductase
PDLKFIBB_01315 1.3e-148 yxeH S hydrolase
PDLKFIBB_01316 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDLKFIBB_01317 2.4e-243 yfnA E Amino Acid
PDLKFIBB_01318 1.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
PDLKFIBB_01319 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDLKFIBB_01320 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDLKFIBB_01321 5.3e-294 I Acyltransferase
PDLKFIBB_01322 5.8e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDLKFIBB_01323 1.3e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKFIBB_01324 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
PDLKFIBB_01325 2.2e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PDLKFIBB_01326 4.3e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PDLKFIBB_01327 9.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDLKFIBB_01328 3.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDLKFIBB_01329 2.6e-35 yaaA S S4 domain protein YaaA
PDLKFIBB_01330 4e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDLKFIBB_01331 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDLKFIBB_01332 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDLKFIBB_01333 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PDLKFIBB_01334 2.7e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDLKFIBB_01335 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDLKFIBB_01336 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PDLKFIBB_01337 5.7e-69 rplI J Binds to the 23S rRNA
PDLKFIBB_01338 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDLKFIBB_01339 2.3e-165 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PDLKFIBB_01342 3.8e-216 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDLKFIBB_01343 3.5e-175 S Cysteine-rich secretory protein family
PDLKFIBB_01344 1.6e-41
PDLKFIBB_01345 2.6e-118 M NlpC/P60 family
PDLKFIBB_01346 1.4e-136 M NlpC P60 family protein
PDLKFIBB_01347 5e-88 M NlpC/P60 family
PDLKFIBB_01348 2.2e-88 gmk2 2.7.4.8 F Guanylate kinase homologues.
PDLKFIBB_01349 3.9e-42
PDLKFIBB_01350 2.9e-279 S O-antigen ligase like membrane protein
PDLKFIBB_01351 3.3e-112
PDLKFIBB_01352 4.7e-221 tnpB L Putative transposase DNA-binding domain
PDLKFIBB_01353 5.5e-77 nrdI F NrdI Flavodoxin like
PDLKFIBB_01354 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDLKFIBB_01355 2.5e-68
PDLKFIBB_01356 9.1e-112 yvpB S Peptidase_C39 like family
PDLKFIBB_01357 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDLKFIBB_01358 1.6e-161 htrA 3.4.21.107 O serine protease
PDLKFIBB_01359 4.1e-147 vicX 3.1.26.11 S domain protein
PDLKFIBB_01360 3.4e-149 yycI S YycH protein
PDLKFIBB_01361 1.6e-257 yycH S YycH protein
PDLKFIBB_01362 2.2e-305 vicK 2.7.13.3 T Histidine kinase
PDLKFIBB_01363 4.8e-131 K response regulator
PDLKFIBB_01365 4.9e-34
PDLKFIBB_01367 1.6e-148 arbV 2.3.1.51 I Acyl-transferase
PDLKFIBB_01368 5e-156 arbx M Glycosyl transferase family 8
PDLKFIBB_01369 5e-184 arbY M Glycosyl transferase family 8
PDLKFIBB_01370 1.6e-182 arbY M Glycosyl transferase family 8
PDLKFIBB_01371 6e-168 arbZ I Phosphate acyltransferases
PDLKFIBB_01372 1.4e-36 S Cytochrome B5
PDLKFIBB_01373 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
PDLKFIBB_01374 2e-10 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDLKFIBB_01375 6.5e-249 yjjP S Putative threonine/serine exporter
PDLKFIBB_01376 2.6e-177 citR K Putative sugar-binding domain
PDLKFIBB_01377 1.5e-50
PDLKFIBB_01378 5.5e-09
PDLKFIBB_01379 2.9e-66 S Domain of unknown function DUF1828
PDLKFIBB_01380 1.5e-95 S UPF0397 protein
PDLKFIBB_01381 0.0 ykoD P ABC transporter, ATP-binding protein
PDLKFIBB_01382 1.4e-145 cbiQ P cobalt transport
PDLKFIBB_01383 7e-22
PDLKFIBB_01384 9.3e-72 yeaL S Protein of unknown function (DUF441)
PDLKFIBB_01385 2.4e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PDLKFIBB_01386 2.4e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PDLKFIBB_01387 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
PDLKFIBB_01388 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PDLKFIBB_01389 1.7e-153 ydjP I Alpha/beta hydrolase family
PDLKFIBB_01390 2.6e-272 P Sodium:sulfate symporter transmembrane region
PDLKFIBB_01391 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
PDLKFIBB_01392 7.5e-183 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PDLKFIBB_01393 6.8e-116 dedA S SNARE-like domain protein
PDLKFIBB_01394 3.7e-100 S Protein of unknown function (DUF1461)
PDLKFIBB_01395 3.4e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDLKFIBB_01396 2.1e-92 yutD S Protein of unknown function (DUF1027)
PDLKFIBB_01397 5.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PDLKFIBB_01398 4.3e-55
PDLKFIBB_01399 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PDLKFIBB_01400 3.2e-181 ccpA K catabolite control protein A
PDLKFIBB_01401 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDLKFIBB_01402 1.3e-36
PDLKFIBB_01403 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PDLKFIBB_01404 3.7e-146 ykuT M mechanosensitive ion channel
PDLKFIBB_01405 6.9e-100 V ATPases associated with a variety of cellular activities
PDLKFIBB_01406 1.7e-139
PDLKFIBB_01407 5.4e-113
PDLKFIBB_01408 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDLKFIBB_01409 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDLKFIBB_01410 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDLKFIBB_01411 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PDLKFIBB_01412 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDLKFIBB_01413 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDLKFIBB_01414 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDLKFIBB_01416 2.7e-34
PDLKFIBB_01417 1.2e-128 S interspecies interaction between organisms
PDLKFIBB_01419 9.1e-10 K peptidyl-tyrosine sulfation
PDLKFIBB_01420 7.1e-263 E ABC transporter, substratebinding protein
PDLKFIBB_01421 3.7e-66 K Helix-turn-helix domain, rpiR family
PDLKFIBB_01422 2.9e-122 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PDLKFIBB_01423 8.4e-90 nanK GK ROK family
PDLKFIBB_01424 2.3e-56 G Xylose isomerase domain protein TIM barrel
PDLKFIBB_01425 1.9e-121 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDLKFIBB_01426 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDLKFIBB_01427 1.1e-59 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PDLKFIBB_01428 1.7e-36 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PDLKFIBB_01429 2.9e-109 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PDLKFIBB_01430 7.7e-10 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDLKFIBB_01431 3.6e-88 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDLKFIBB_01432 5.7e-18
PDLKFIBB_01433 1.5e-239 G Bacterial extracellular solute-binding protein
PDLKFIBB_01434 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
PDLKFIBB_01435 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
PDLKFIBB_01437 0.0 S SLAP domain
PDLKFIBB_01438 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
PDLKFIBB_01439 2.2e-213 S AAA domain, putative AbiEii toxin, Type IV TA system
PDLKFIBB_01440 1.4e-283 hsdM 2.1.1.72 V type I restriction-modification system
PDLKFIBB_01441 1.8e-129 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PDLKFIBB_01442 4.1e-15 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_01443 4e-24 S Domain of unknown function (DUF771)
PDLKFIBB_01445 3.5e-09
PDLKFIBB_01450 1.5e-54 S Protein of unknown function (DUF1351)
PDLKFIBB_01451 8.3e-46 S ERF superfamily
PDLKFIBB_01452 2.6e-23 K Conserved phage C-terminus (Phg_2220_C)
PDLKFIBB_01453 8.7e-20 K transcriptional
PDLKFIBB_01455 2.6e-21 radC L DNA repair protein
PDLKFIBB_01466 4.5e-49 Q DNA (cytosine-5-)-methyltransferase activity
PDLKFIBB_01471 4e-69 S ORF6C domain
PDLKFIBB_01473 1e-10 S VRR_NUC
PDLKFIBB_01475 2e-09
PDLKFIBB_01481 1.1e-20 S N-methyltransferase activity
PDLKFIBB_01484 9.6e-187 S Terminase-like family
PDLKFIBB_01485 1.9e-91 S Protein of unknown function (DUF1073)
PDLKFIBB_01486 9.6e-56 S Phage Mu protein F like protein
PDLKFIBB_01487 4.8e-20 S Lysin motif
PDLKFIBB_01488 1.3e-53 S Uncharacterized protein conserved in bacteria (DUF2213)
PDLKFIBB_01489 1e-22
PDLKFIBB_01490 7.7e-37 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
PDLKFIBB_01491 1.6e-27 S Protein of unknown function (DUF4054)
PDLKFIBB_01492 7.7e-42
PDLKFIBB_01493 2.7e-10
PDLKFIBB_01494 1.6e-27
PDLKFIBB_01495 1.7e-133 Z012_02110 S Protein of unknown function (DUF3383)
PDLKFIBB_01496 2.3e-11
PDLKFIBB_01497 1.1e-11
PDLKFIBB_01498 2.1e-188 M Phage tail tape measure protein TP901
PDLKFIBB_01499 6.5e-59 M LysM domain
PDLKFIBB_01500 2.7e-46
PDLKFIBB_01501 1.8e-103
PDLKFIBB_01502 5.9e-37
PDLKFIBB_01503 1.7e-28
PDLKFIBB_01504 6.7e-114 Z012_12235 S Baseplate J-like protein
PDLKFIBB_01505 2.9e-09
PDLKFIBB_01506 2.5e-20
PDLKFIBB_01507 2.7e-94 mreD
PDLKFIBB_01508 2e-147 mreC M Involved in formation and maintenance of cell shape
PDLKFIBB_01509 2.4e-176 mreB D cell shape determining protein MreB
PDLKFIBB_01510 2.3e-108 radC L DNA repair protein
PDLKFIBB_01511 5.7e-126 S Haloacid dehalogenase-like hydrolase
PDLKFIBB_01512 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDLKFIBB_01513 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDLKFIBB_01514 2.5e-52
PDLKFIBB_01515 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
PDLKFIBB_01516 0.0 3.6.3.8 P P-type ATPase
PDLKFIBB_01518 6.5e-44
PDLKFIBB_01519 1.5e-94 S Protein of unknown function (DUF3990)
PDLKFIBB_01520 1.5e-180 S Domain of unknown function (DUF389)
PDLKFIBB_01521 8.8e-223 L Transposase
PDLKFIBB_01524 4.2e-53 K LytTr DNA-binding domain
PDLKFIBB_01525 7.7e-39 S Protein of unknown function (DUF3021)
PDLKFIBB_01526 6.3e-168 V ABC transporter
PDLKFIBB_01527 8e-92 S domain protein
PDLKFIBB_01528 4.9e-251 ade 3.5.4.2 F Adenine deaminase C-terminal domain
PDLKFIBB_01529 3e-145 potD2 P ABC transporter
PDLKFIBB_01530 1.4e-136 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDLKFIBB_01531 2.2e-108 potC3 E Binding-protein-dependent transport system inner membrane component
PDLKFIBB_01532 3.8e-103 potB E Binding-protein-dependent transport system inner membrane component
PDLKFIBB_01533 1.3e-141 yfeO P Voltage gated chloride channel
PDLKFIBB_01534 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
PDLKFIBB_01535 1.4e-51
PDLKFIBB_01536 2.1e-42
PDLKFIBB_01537 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDLKFIBB_01538 9.5e-297 ybeC E amino acid
PDLKFIBB_01539 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
PDLKFIBB_01540 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PDLKFIBB_01541 2.5e-39 rpmE2 J Ribosomal protein L31
PDLKFIBB_01542 1.2e-258 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDLKFIBB_01543 4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDLKFIBB_01544 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDLKFIBB_01545 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDLKFIBB_01547 9.5e-220 L Belongs to the 'phage' integrase family
PDLKFIBB_01548 2.3e-26
PDLKFIBB_01549 3.9e-55
PDLKFIBB_01550 4e-139 S Replication initiation factor
PDLKFIBB_01551 1.4e-134 D Ftsk spoiiie family protein
PDLKFIBB_01552 2.6e-84
PDLKFIBB_01553 6.9e-64
PDLKFIBB_01554 1.4e-18 K Helix-turn-helix XRE-family like proteins
PDLKFIBB_01556 9.2e-119 yhiD S MgtC family
PDLKFIBB_01557 8e-227 I Protein of unknown function (DUF2974)
PDLKFIBB_01558 1.4e-16
PDLKFIBB_01560 1.5e-166 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PDLKFIBB_01561 4.2e-135 V ABC transporter transmembrane region
PDLKFIBB_01562 3.7e-168 degV S DegV family
PDLKFIBB_01563 4e-57 K Helix-turn-helix domain
PDLKFIBB_01564 2.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDLKFIBB_01565 2.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
PDLKFIBB_01566 5.6e-183 K Transcriptional regulator
PDLKFIBB_01567 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDLKFIBB_01568 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDLKFIBB_01569 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDLKFIBB_01570 0.0 snf 2.7.11.1 KL domain protein
PDLKFIBB_01571 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
PDLKFIBB_01572 3.6e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PDLKFIBB_01573 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PDLKFIBB_01574 3.5e-71 yqeY S YqeY-like protein
PDLKFIBB_01575 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
PDLKFIBB_01576 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDLKFIBB_01577 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDLKFIBB_01578 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
PDLKFIBB_01579 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PDLKFIBB_01580 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PDLKFIBB_01581 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDLKFIBB_01582 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDLKFIBB_01583 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDLKFIBB_01584 2.3e-245 ynbB 4.4.1.1 P aluminum resistance
PDLKFIBB_01585 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PDLKFIBB_01586 1.7e-284 E Amino acid permease
PDLKFIBB_01587 6.3e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PDLKFIBB_01588 1.4e-272 pepV 3.5.1.18 E dipeptidase PepV
PDLKFIBB_01589 1.4e-115 mmuP E amino acid
PDLKFIBB_01590 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PDLKFIBB_01591 1e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDLKFIBB_01592 3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDLKFIBB_01593 1.2e-149 xerD L Phage integrase, N-terminal SAM-like domain
PDLKFIBB_01594 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDLKFIBB_01595 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDLKFIBB_01596 1.7e-29 secG U Preprotein translocase
PDLKFIBB_01597 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDLKFIBB_01598 1.4e-176 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDLKFIBB_01599 7.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
PDLKFIBB_01600 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PDLKFIBB_01628 1.2e-222 patA 2.6.1.1 E Aminotransferase
PDLKFIBB_01629 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDLKFIBB_01630 5.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PDLKFIBB_01631 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDLKFIBB_01632 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDLKFIBB_01633 8.5e-60
PDLKFIBB_01634 6.5e-176 prmA J Ribosomal protein L11 methyltransferase
PDLKFIBB_01635 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDLKFIBB_01636 5.9e-37 M domain protein
PDLKFIBB_01638 0.0 S membrane
PDLKFIBB_01639 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PDLKFIBB_01640 1.3e-38 S RelB antitoxin
PDLKFIBB_01641 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PDLKFIBB_01642 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDLKFIBB_01643 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
PDLKFIBB_01644 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PDLKFIBB_01645 8.7e-159 isdE P Periplasmic binding protein
PDLKFIBB_01646 6.3e-123 M Iron Transport-associated domain
PDLKFIBB_01647 3e-09 isdH M Iron Transport-associated domain
PDLKFIBB_01648 8.4e-89
PDLKFIBB_01649 1.1e-112 S SLAP domain
PDLKFIBB_01650 1.2e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDLKFIBB_01651 8.2e-230 pbuG S permease
PDLKFIBB_01652 8.2e-140 cof S haloacid dehalogenase-like hydrolase
PDLKFIBB_01653 9.4e-72
PDLKFIBB_01654 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDLKFIBB_01655 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDLKFIBB_01656 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDLKFIBB_01657 3.7e-159 yeaE S Aldo/keto reductase family
PDLKFIBB_01658 2.2e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
PDLKFIBB_01659 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
PDLKFIBB_01660 1.3e-282 xylG 3.6.3.17 S ABC transporter
PDLKFIBB_01661 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
PDLKFIBB_01662 3.9e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
PDLKFIBB_01663 2.8e-100 S ECF transporter, substrate-specific component
PDLKFIBB_01664 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PDLKFIBB_01665 0.0 macB_3 V ABC transporter, ATP-binding protein
PDLKFIBB_01666 1.6e-194 S DUF218 domain
PDLKFIBB_01667 2.7e-120 S CAAX protease self-immunity
PDLKFIBB_01668 3e-111 ropB K Transcriptional regulator
PDLKFIBB_01669 4.2e-154 EGP Major facilitator Superfamily
PDLKFIBB_01670 5.4e-51
PDLKFIBB_01671 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
PDLKFIBB_01672 4.1e-276 V ABC transporter transmembrane region
PDLKFIBB_01673 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
PDLKFIBB_01674 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PDLKFIBB_01675 2.8e-205 napA P Sodium/hydrogen exchanger family
PDLKFIBB_01676 0.0 cadA P P-type ATPase
PDLKFIBB_01677 1.5e-80 ykuL S (CBS) domain
PDLKFIBB_01678 1e-207 ywhK S Membrane
PDLKFIBB_01679 4.1e-44
PDLKFIBB_01680 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
PDLKFIBB_01681 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDLKFIBB_01682 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
PDLKFIBB_01683 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDLKFIBB_01684 7.3e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDLKFIBB_01685 7.6e-177 pbpX2 V Beta-lactamase
PDLKFIBB_01686 3e-80 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDLKFIBB_01687 1.9e-122 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PDLKFIBB_01688 1.1e-128 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PDLKFIBB_01689 3.3e-139 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDLKFIBB_01690 9.6e-237 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PDLKFIBB_01691 9.2e-61 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PDLKFIBB_01692 2.2e-49 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDLKFIBB_01693 4e-210 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDLKFIBB_01694 8.4e-107 IQ reductase
PDLKFIBB_01695 1.7e-139 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PDLKFIBB_01696 2.1e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDLKFIBB_01697 2.9e-38 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDLKFIBB_01698 1.1e-86 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDLKFIBB_01699 1.3e-48 4.2.1.59 I 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
PDLKFIBB_01700 1.6e-73 marR K Transcriptional regulator, MarR family
PDLKFIBB_01701 1.5e-80
PDLKFIBB_01702 5.6e-132 oppC P Binding-protein-dependent transport system inner membrane component
PDLKFIBB_01703 2.6e-172 oppB P ABC transporter permease
PDLKFIBB_01704 1.5e-170 oppF P Belongs to the ABC transporter superfamily
PDLKFIBB_01705 1.1e-192 oppD P Belongs to the ABC transporter superfamily
PDLKFIBB_01706 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDLKFIBB_01707 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDLKFIBB_01708 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDLKFIBB_01709 7.6e-305 yloV S DAK2 domain fusion protein YloV
PDLKFIBB_01710 4e-57 asp S Asp23 family, cell envelope-related function
PDLKFIBB_01711 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PDLKFIBB_01714 6.2e-165 psaA P Belongs to the bacterial solute-binding protein 9 family
PDLKFIBB_01717 6.4e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDLKFIBB_01718 8.5e-260 qacA EGP Major facilitator Superfamily
PDLKFIBB_01720 1.3e-79 ybbH_2 K Helix-turn-helix domain, rpiR family
PDLKFIBB_01721 3.6e-120 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PDLKFIBB_01722 1.8e-119 S Putative esterase
PDLKFIBB_01723 4.1e-214 2.7.1.208, 2.7.1.211 G phosphotransferase system
PDLKFIBB_01724 3.4e-195 S Bacterial protein of unknown function (DUF871)
PDLKFIBB_01725 3.7e-130 ybbH_2 K rpiR family
PDLKFIBB_01726 1.2e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDLKFIBB_01729 6.3e-159 xth 3.1.11.2 L exodeoxyribonuclease III
PDLKFIBB_01730 1.3e-273 E amino acid
PDLKFIBB_01731 0.0 L Helicase C-terminal domain protein
PDLKFIBB_01732 4.8e-205 pbpX1 V Beta-lactamase
PDLKFIBB_01733 5.1e-226 N Uncharacterized conserved protein (DUF2075)
PDLKFIBB_01734 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDLKFIBB_01735 1.9e-21
PDLKFIBB_01736 1.7e-147
PDLKFIBB_01737 1.5e-169
PDLKFIBB_01738 2e-263 glnA 6.3.1.2 E glutamine synthetase
PDLKFIBB_01739 7.8e-222 ynbB 4.4.1.1 P aluminum resistance
PDLKFIBB_01740 1e-168 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDLKFIBB_01741 1.5e-65 yqhL P Rhodanese-like protein
PDLKFIBB_01742 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
PDLKFIBB_01743 3.1e-119 gluP 3.4.21.105 S Rhomboid family
PDLKFIBB_01744 2.1e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDLKFIBB_01745 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDLKFIBB_01746 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PDLKFIBB_01747 2.6e-155
PDLKFIBB_01748 7.8e-38
PDLKFIBB_01749 2e-32
PDLKFIBB_01750 6.2e-163 EG EamA-like transporter family
PDLKFIBB_01751 5e-165 EG EamA-like transporter family
PDLKFIBB_01752 1.2e-139 yicL EG EamA-like transporter family
PDLKFIBB_01753 4.3e-107
PDLKFIBB_01754 1.1e-110
PDLKFIBB_01755 5.8e-186 XK27_05540 S DUF218 domain
PDLKFIBB_01756 9.3e-264 yheS_2 S ATPases associated with a variety of cellular activities
PDLKFIBB_01757 4.7e-85
PDLKFIBB_01758 3.9e-57
PDLKFIBB_01759 4.7e-25 S Protein conserved in bacteria
PDLKFIBB_01760 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
PDLKFIBB_01762 1.8e-81 M NlpC/P60 family
PDLKFIBB_01763 2.1e-131 cobQ S glutamine amidotransferase
PDLKFIBB_01764 6.5e-64 L RelB antitoxin
PDLKFIBB_01765 1.1e-75 V ABC transporter transmembrane region
PDLKFIBB_01766 2.9e-224 L transposase, IS605 OrfB family
PDLKFIBB_01767 6.1e-136 V ABC transporter transmembrane region
PDLKFIBB_01768 1.7e-184 G Transmembrane secretion effector
PDLKFIBB_01769 1.5e-144 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDLKFIBB_01770 3.4e-30 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDLKFIBB_01771 7.4e-194 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDLKFIBB_01772 1.7e-22 blpT
PDLKFIBB_01773 4.6e-27 S Enterocin A Immunity
PDLKFIBB_01776 1.3e-69 doc S Prophage maintenance system killer protein
PDLKFIBB_01777 2.9e-31
PDLKFIBB_01778 0.0 pepF E oligoendopeptidase F
PDLKFIBB_01779 8.7e-197 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDLKFIBB_01780 1.8e-111 S Protein of unknown function (DUF554)
PDLKFIBB_01781 1.2e-30
PDLKFIBB_01782 1.4e-34
PDLKFIBB_01783 5e-72 rimL J Acetyltransferase (GNAT) domain
PDLKFIBB_01784 8.3e-58
PDLKFIBB_01785 8.9e-292 S ABC transporter
PDLKFIBB_01786 2.4e-136 thrE S Putative threonine/serine exporter
PDLKFIBB_01787 4.7e-46 pspC KT PspC domain
PDLKFIBB_01789 1.3e-240 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDLKFIBB_01790 2.8e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDLKFIBB_01791 6.7e-98 M ErfK YbiS YcfS YnhG
PDLKFIBB_01792 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PDLKFIBB_01793 4.6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PDLKFIBB_01794 2.2e-85 S PFAM Archaeal ATPase
PDLKFIBB_01795 3.9e-36 S PFAM Archaeal ATPase
PDLKFIBB_01796 7.1e-34 S PFAM Archaeal ATPase
PDLKFIBB_01797 7.7e-26
PDLKFIBB_01798 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDLKFIBB_01799 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDLKFIBB_01800 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDLKFIBB_01801 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDLKFIBB_01802 2.6e-166 xerD D recombinase XerD
PDLKFIBB_01803 1.9e-169 cvfB S S1 domain
PDLKFIBB_01804 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PDLKFIBB_01805 3.6e-182 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDLKFIBB_01806 0.0 dnaE 2.7.7.7 L DNA polymerase
PDLKFIBB_01807 2.3e-23 S Protein of unknown function (DUF2929)
PDLKFIBB_01808 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
PDLKFIBB_01809 3.4e-79
PDLKFIBB_01810 1e-242 cpdA S Calcineurin-like phosphoesterase
PDLKFIBB_01811 3.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PDLKFIBB_01812 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDLKFIBB_01813 1e-107 ypsA S Belongs to the UPF0398 family
PDLKFIBB_01814 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDLKFIBB_01815 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PDLKFIBB_01816 2.7e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDLKFIBB_01817 1.3e-114 dnaD L DnaD domain protein
PDLKFIBB_01818 5.8e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PDLKFIBB_01819 2.4e-89 ypmB S Protein conserved in bacteria
PDLKFIBB_01820 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PDLKFIBB_01821 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PDLKFIBB_01822 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PDLKFIBB_01823 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PDLKFIBB_01824 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PDLKFIBB_01825 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PDLKFIBB_01826 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDLKFIBB_01827 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
PDLKFIBB_01828 8.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PDLKFIBB_01829 9.7e-169
PDLKFIBB_01830 7.5e-143
PDLKFIBB_01831 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDLKFIBB_01832 1.4e-26
PDLKFIBB_01833 6.7e-145
PDLKFIBB_01834 5.1e-137
PDLKFIBB_01835 4.5e-141
PDLKFIBB_01836 9.6e-124 skfE V ATPases associated with a variety of cellular activities
PDLKFIBB_01837 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
PDLKFIBB_01838 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDLKFIBB_01839 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDLKFIBB_01840 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
PDLKFIBB_01841 4.8e-81 mutT 3.6.1.55 F NUDIX domain
PDLKFIBB_01842 9.1e-37 S Putative adhesin
PDLKFIBB_01843 3.7e-261 V ABC transporter transmembrane region
PDLKFIBB_01844 1.1e-139
PDLKFIBB_01845 3.7e-20
PDLKFIBB_01848 2.4e-36
PDLKFIBB_01849 4.9e-58 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDLKFIBB_01850 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDLKFIBB_01851 0.0 copA 3.6.3.54 P P-type ATPase
PDLKFIBB_01852 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PDLKFIBB_01853 1.5e-103
PDLKFIBB_01854 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PDLKFIBB_01855 9e-98
PDLKFIBB_01856 4.9e-108 K LysR substrate binding domain
PDLKFIBB_01857 1e-20
PDLKFIBB_01858 2.3e-215 S Sterol carrier protein domain
PDLKFIBB_01859 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PDLKFIBB_01860 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
PDLKFIBB_01861 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDLKFIBB_01862 5.7e-233 arcA 3.5.3.6 E Arginine
PDLKFIBB_01863 9e-137 lysR5 K LysR substrate binding domain
PDLKFIBB_01864 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PDLKFIBB_01865 1e-48 S Metal binding domain of Ada
PDLKFIBB_01866 0.0 clpE O Belongs to the ClpA ClpB family
PDLKFIBB_01867 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
PDLKFIBB_01868 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDLKFIBB_01869 1.4e-140 hlyX S Transporter associated domain
PDLKFIBB_01870 2.7e-74
PDLKFIBB_01871 1.6e-85
PDLKFIBB_01872 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
PDLKFIBB_01873 3e-262 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDLKFIBB_01874 1.4e-118 D Alpha beta
PDLKFIBB_01875 1.8e-38 D Alpha beta
PDLKFIBB_01876 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
PDLKFIBB_01877 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDLKFIBB_01878 2.6e-280 thrC 4.2.3.1 E Threonine synthase
PDLKFIBB_01879 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PDLKFIBB_01880 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDLKFIBB_01881 9.4e-118
PDLKFIBB_01882 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDLKFIBB_01884 1.8e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDLKFIBB_01885 1.3e-116 S Peptidase family M23
PDLKFIBB_01886 1.9e-12 L Transposase
PDLKFIBB_01887 1.4e-16 L Transposase
PDLKFIBB_01888 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDLKFIBB_01889 5.2e-68 L haloacid dehalogenase-like hydrolase
PDLKFIBB_01890 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PDLKFIBB_01891 8e-128 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
PDLKFIBB_01892 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
PDLKFIBB_01893 4.1e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PDLKFIBB_01894 1.3e-231 ulaA S PTS system sugar-specific permease component
PDLKFIBB_01895 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDLKFIBB_01896 8.1e-175 ulaG S Beta-lactamase superfamily domain
PDLKFIBB_01898 1.6e-08
PDLKFIBB_01899 1.6e-08
PDLKFIBB_01900 1.6e-08
PDLKFIBB_01901 1.4e-83 K FR47-like protein
PDLKFIBB_01902 1.1e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDLKFIBB_01903 2.1e-182 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDLKFIBB_01904 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDLKFIBB_01905 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDLKFIBB_01906 2.6e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDLKFIBB_01907 1.8e-62 yabR J S1 RNA binding domain
PDLKFIBB_01908 6.8e-60 divIC D Septum formation initiator
PDLKFIBB_01909 4.4e-151 S Metal-independent alpha-mannosidase (GH125)
PDLKFIBB_01911 3.8e-184 manA 5.3.1.8 G mannose-6-phosphate isomerase
PDLKFIBB_01912 2.7e-155 L Transposase
PDLKFIBB_01916 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
PDLKFIBB_01917 4.2e-61 V Abi-like protein
PDLKFIBB_01918 1.7e-32 L AAA domain
PDLKFIBB_01919 1.4e-126 pgm3 G Phosphoglycerate mutase family
PDLKFIBB_01920 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PDLKFIBB_01921 0.0 helD 3.6.4.12 L DNA helicase
PDLKFIBB_01922 1.5e-107 glnP P ABC transporter permease
PDLKFIBB_01923 1e-105 glnQ 3.6.3.21 E ABC transporter
PDLKFIBB_01924 1.6e-143 aatB ET ABC transporter substrate-binding protein
PDLKFIBB_01925 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
PDLKFIBB_01926 7.1e-98 E GDSL-like Lipase/Acylhydrolase
PDLKFIBB_01927 2.5e-169 coaA 2.7.1.33 F Pantothenic acid kinase
PDLKFIBB_01928 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDLKFIBB_01929 8.8e-58 S Peptidase propeptide and YPEB domain
PDLKFIBB_01930 8.4e-265 S Fibronectin type III domain
PDLKFIBB_01931 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDLKFIBB_01932 3.4e-53
PDLKFIBB_01934 4.6e-257 pepC 3.4.22.40 E aminopeptidase
PDLKFIBB_01935 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDLKFIBB_01936 1.7e-301 oppA E ABC transporter, substratebinding protein
PDLKFIBB_01937 1.6e-310 oppA E ABC transporter, substratebinding protein
PDLKFIBB_01938 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PDLKFIBB_01939 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDLKFIBB_01940 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDLKFIBB_01941 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDLKFIBB_01942 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDLKFIBB_01943 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDLKFIBB_01944 9.5e-31
PDLKFIBB_01945 6.2e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDLKFIBB_01948 1.7e-195 ampC V Beta-lactamase
PDLKFIBB_01949 4.9e-217 EGP Major facilitator Superfamily
PDLKFIBB_01950 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
PDLKFIBB_01951 1.1e-104 vanZ V VanZ like family
PDLKFIBB_01952 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDLKFIBB_01953 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
PDLKFIBB_01954 4.4e-129 K Transcriptional regulatory protein, C terminal
PDLKFIBB_01955 7.7e-67 S SdpI/YhfL protein family
PDLKFIBB_01956 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
PDLKFIBB_01957 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
PDLKFIBB_01958 1.2e-78 M Protein of unknown function (DUF3737)
PDLKFIBB_01959 7.4e-15 M Protein of unknown function (DUF3737)
PDLKFIBB_01961 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDLKFIBB_01962 9.5e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
PDLKFIBB_01963 1.6e-21
PDLKFIBB_01964 3.8e-77 comGF U Putative Competence protein ComGF
PDLKFIBB_01965 2.3e-41
PDLKFIBB_01966 1.8e-69
PDLKFIBB_01967 3.1e-43 comGC U competence protein ComGC
PDLKFIBB_01968 1.7e-171 comGB NU type II secretion system
PDLKFIBB_01969 1.7e-179 comGA NU Type II IV secretion system protein
PDLKFIBB_01970 8.9e-133 yebC K Transcriptional regulatory protein
PDLKFIBB_01971 7.6e-94 S VanZ like family
PDLKFIBB_01972 3.5e-101 ylbE GM NAD(P)H-binding
PDLKFIBB_01973 3.7e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDLKFIBB_01975 1.3e-160 L hmm pf00665
PDLKFIBB_01976 5.8e-100 L Helix-turn-helix domain
PDLKFIBB_01977 2e-310 E Amino acid permease
PDLKFIBB_01979 8.8e-82 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDLKFIBB_01980 2.8e-90 2.7.7.65 T GGDEF domain
PDLKFIBB_01981 8.2e-36
PDLKFIBB_01982 5.2e-112 ica2 GT2 M Glycosyl transferase family group 2
PDLKFIBB_01983 3.7e-26 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PDLKFIBB_01984 1.2e-92 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
PDLKFIBB_01985 1e-149 D Alpha beta
PDLKFIBB_01986 1e-297 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDLKFIBB_01987 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
PDLKFIBB_01988 8.3e-143 licT K CAT RNA binding domain
PDLKFIBB_01989 2e-234 mepA V MATE efflux family protein
PDLKFIBB_01990 3.5e-71 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
PDLKFIBB_01991 1.8e-58 S Putative adhesin
PDLKFIBB_01992 5.6e-101 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDLKFIBB_01993 3.8e-20 1.3.5.4 C FAD dependent oxidoreductase
PDLKFIBB_01994 1.1e-83 dps P Belongs to the Dps family
PDLKFIBB_01995 2e-178 MA20_14895 S Conserved hypothetical protein 698
PDLKFIBB_01997 5.6e-191 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDLKFIBB_01998 2.9e-277 V ABC transporter transmembrane region
PDLKFIBB_01999 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PDLKFIBB_02000 3.1e-130 T Transcriptional regulatory protein, C terminal
PDLKFIBB_02001 5.2e-187 T GHKL domain
PDLKFIBB_02002 3.4e-76 S Peptidase propeptide and YPEB domain
PDLKFIBB_02003 2.5e-72 S Peptidase propeptide and YPEB domain
PDLKFIBB_02004 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PDLKFIBB_02005 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
PDLKFIBB_02006 7e-68 V ABC transporter transmembrane region
PDLKFIBB_02007 9e-161 V ABC transporter transmembrane region
PDLKFIBB_02008 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDLKFIBB_02009 2.7e-18 M Lysin motif
PDLKFIBB_02010 2.2e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PDLKFIBB_02011 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
PDLKFIBB_02012 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PDLKFIBB_02013 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDLKFIBB_02014 1.4e-75 S Tetratricopeptide repeat protein
PDLKFIBB_02015 3.8e-99 S Tetratricopeptide repeat protein
PDLKFIBB_02016 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDLKFIBB_02017 1.2e-241 S response to antibiotic
PDLKFIBB_02018 4.9e-125
PDLKFIBB_02019 0.0 3.6.3.8 P P-type ATPase
PDLKFIBB_02020 8.7e-66 2.7.1.191 G PTS system fructose IIA component
PDLKFIBB_02021 4.4e-43
PDLKFIBB_02022 5.9e-09
PDLKFIBB_02023 9.4e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
PDLKFIBB_02024 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
PDLKFIBB_02025 3.9e-72 hsp O Belongs to the small heat shock protein (HSP20) family
PDLKFIBB_02026 1.4e-256 pepC 3.4.22.40 E aminopeptidase
PDLKFIBB_02027 1.9e-175 oppF P Belongs to the ABC transporter superfamily
PDLKFIBB_02028 2.7e-199 oppD P Belongs to the ABC transporter superfamily
PDLKFIBB_02029 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDLKFIBB_02030 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDLKFIBB_02031 3.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDLKFIBB_02032 2.1e-135 UW LPXTG-motif cell wall anchor domain protein
PDLKFIBB_02033 1.3e-161 UW LPXTG-motif cell wall anchor domain protein
PDLKFIBB_02034 3.3e-45 UW LPXTG-motif cell wall anchor domain protein
PDLKFIBB_02035 9.1e-10 UW LPXTG-motif cell wall anchor domain protein
PDLKFIBB_02036 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDLKFIBB_02037 7.5e-100 J Acetyltransferase (GNAT) domain
PDLKFIBB_02038 1.4e-110 yjbF S SNARE associated Golgi protein
PDLKFIBB_02039 2.7e-151 I alpha/beta hydrolase fold
PDLKFIBB_02040 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDLKFIBB_02041 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
PDLKFIBB_02042 6.8e-110 yjbK S CYTH
PDLKFIBB_02043 4.6e-114 yjbH Q Thioredoxin
PDLKFIBB_02044 1.4e-158 coiA 3.6.4.12 S Competence protein
PDLKFIBB_02045 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDLKFIBB_02046 1.1e-65 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDLKFIBB_02047 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDLKFIBB_02048 8.5e-41 ptsH G phosphocarrier protein HPR
PDLKFIBB_02049 5.3e-26
PDLKFIBB_02050 7e-87 gtcA S Teichoic acid glycosylation protein
PDLKFIBB_02051 4.1e-80 fld C Flavodoxin
PDLKFIBB_02052 1.4e-163 map 3.4.11.18 E Methionine Aminopeptidase
PDLKFIBB_02053 3.6e-163 yihY S Belongs to the UPF0761 family
PDLKFIBB_02054 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PDLKFIBB_02055 5.6e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PDLKFIBB_02056 3.6e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PDLKFIBB_02057 2.9e-247 mntH P H( )-stimulated, divalent metal cation uptake system
PDLKFIBB_02058 2.4e-45 yitW S Iron-sulfur cluster assembly protein
PDLKFIBB_02059 2e-266 sufB O assembly protein SufB
PDLKFIBB_02060 2.4e-59 nifU C SUF system FeS assembly protein, NifU family
PDLKFIBB_02061 5.3e-178 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDLKFIBB_02062 3.5e-174 sufD O FeS assembly protein SufD
PDLKFIBB_02063 2.8e-140 sufC O FeS assembly ATPase SufC
PDLKFIBB_02064 6.8e-08
PDLKFIBB_02065 3e-89 ntd 2.4.2.6 F Nucleoside
PDLKFIBB_02066 8.6e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDLKFIBB_02067 7.5e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
PDLKFIBB_02068 2.2e-82 uspA T universal stress protein
PDLKFIBB_02070 1.2e-161 phnD P Phosphonate ABC transporter
PDLKFIBB_02071 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PDLKFIBB_02072 1.4e-120 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PDLKFIBB_02073 1.3e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PDLKFIBB_02074 1.2e-74
PDLKFIBB_02075 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDLKFIBB_02076 2.1e-168 dnaI L Primosomal protein DnaI
PDLKFIBB_02077 5.1e-251 dnaB L Replication initiation and membrane attachment
PDLKFIBB_02078 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDLKFIBB_02079 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDLKFIBB_02080 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDLKFIBB_02081 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDLKFIBB_02082 3.5e-25 qmcA O prohibitin homologues
PDLKFIBB_02083 7.4e-105 qmcA O prohibitin homologues
PDLKFIBB_02084 8e-51 L RelB antitoxin
PDLKFIBB_02085 4.5e-188 S Bacteriocin helveticin-J
PDLKFIBB_02086 4.4e-283 M Peptidase family M1 domain
PDLKFIBB_02087 1.8e-176 S SLAP domain
PDLKFIBB_02088 6.9e-218 mepA V MATE efflux family protein
PDLKFIBB_02089 9.7e-247 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PDLKFIBB_02090 1.4e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDLKFIBB_02091 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PDLKFIBB_02093 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDLKFIBB_02094 6.5e-221 ecsB U ABC transporter
PDLKFIBB_02095 5.7e-135 ecsA V ABC transporter, ATP-binding protein
PDLKFIBB_02096 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
PDLKFIBB_02097 3.9e-25
PDLKFIBB_02098 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDLKFIBB_02099 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PDLKFIBB_02100 1.1e-265
PDLKFIBB_02101 2.4e-51 S Domain of unknown function DUF1829
PDLKFIBB_02102 2.9e-23
PDLKFIBB_02103 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDLKFIBB_02104 0.0 L AAA domain
PDLKFIBB_02105 1e-226 yhaO L Ser Thr phosphatase family protein
PDLKFIBB_02106 7.2e-56 yheA S Belongs to the UPF0342 family
PDLKFIBB_02107 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDLKFIBB_02108 4.2e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDLKFIBB_02109 1.4e-109 yniG EGP Major facilitator Superfamily
PDLKFIBB_02110 5.4e-237 L transposase, IS605 OrfB family
PDLKFIBB_02111 1.2e-76 yniG EGP Major facilitator Superfamily
PDLKFIBB_02112 4.9e-35
PDLKFIBB_02114 1.3e-42
PDLKFIBB_02115 1.9e-75 M LysM domain
PDLKFIBB_02116 3.2e-156 htpX O Belongs to the peptidase M48B family
PDLKFIBB_02117 5.1e-96 lemA S LemA family
PDLKFIBB_02118 7.5e-192 ybiR P Citrate transporter
PDLKFIBB_02119 2e-70 S Iron-sulphur cluster biosynthesis
PDLKFIBB_02120 1.9e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PDLKFIBB_02121 1.2e-17
PDLKFIBB_02122 2.1e-188 L COG2826 Transposase and inactivated derivatives, IS30 family
PDLKFIBB_02123 1.2e-49 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDLKFIBB_02124 7e-135 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PDLKFIBB_02125 1.3e-68 GM NAD(P)H-binding
PDLKFIBB_02126 8.9e-34 S Domain of unknown function (DUF4440)
PDLKFIBB_02127 6.6e-90 K LysR substrate binding domain
PDLKFIBB_02129 3.3e-45 K Tetracycline repressor, C-terminal all-alpha domain
PDLKFIBB_02130 3.2e-79 S X-Pro dipeptidyl-peptidase (S15 family)
PDLKFIBB_02131 7.7e-10 C Flavodoxin
PDLKFIBB_02132 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDLKFIBB_02133 1.8e-104 3.2.2.20 K acetyltransferase
PDLKFIBB_02135 1.8e-196 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDLKFIBB_02136 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
PDLKFIBB_02137 4.1e-21 K Helix-turn-helix domain, rpiR family
PDLKFIBB_02138 1.3e-71 K Helix-turn-helix domain, rpiR family
PDLKFIBB_02139 2.5e-226 pbuG S permease
PDLKFIBB_02140 9.7e-146 S haloacid dehalogenase-like hydrolase
PDLKFIBB_02141 2e-225 S cog cog1373
PDLKFIBB_02142 6.1e-61 K Transcriptional regulator
PDLKFIBB_02143 1.1e-93 K Transcriptional regulator
PDLKFIBB_02144 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PDLKFIBB_02145 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
PDLKFIBB_02146 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
PDLKFIBB_02147 9e-121
PDLKFIBB_02148 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
PDLKFIBB_02149 3.9e-186 S Putative peptidoglycan binding domain
PDLKFIBB_02150 4e-16
PDLKFIBB_02151 2.1e-92 liaI S membrane
PDLKFIBB_02152 6.6e-70 XK27_02470 K LytTr DNA-binding domain
PDLKFIBB_02153 1.2e-18 S Sugar efflux transporter for intercellular exchange
PDLKFIBB_02154 1.3e-250 dtpT U amino acid peptide transporter
PDLKFIBB_02155 8.4e-25 G Peptidase_C39 like family
PDLKFIBB_02156 2.8e-162 M NlpC/P60 family
PDLKFIBB_02157 6.5e-91 G Peptidase_C39 like family
PDLKFIBB_02158 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PDLKFIBB_02159 2.8e-77 P Cobalt transport protein
PDLKFIBB_02160 6.9e-248 cbiO1 S ABC transporter, ATP-binding protein
PDLKFIBB_02161 4.3e-172 K helix_turn_helix, arabinose operon control protein
PDLKFIBB_02162 9.3e-86
PDLKFIBB_02163 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDLKFIBB_02164 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
PDLKFIBB_02165 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDLKFIBB_02166 4.4e-140 ypuA S Protein of unknown function (DUF1002)
PDLKFIBB_02167 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
PDLKFIBB_02168 7.3e-126 S Alpha/beta hydrolase family
PDLKFIBB_02169 3.4e-129 S (CBS) domain
PDLKFIBB_02170 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDLKFIBB_02171 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDLKFIBB_02172 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDLKFIBB_02173 2.2e-142 S Belongs to the UPF0246 family
PDLKFIBB_02174 4.1e-141 aroD S Alpha/beta hydrolase family
PDLKFIBB_02175 3.5e-111 G phosphoglycerate mutase
PDLKFIBB_02176 3.2e-92 ygfC K Bacterial regulatory proteins, tetR family
PDLKFIBB_02177 3.3e-176 hrtB V ABC transporter permease
PDLKFIBB_02178 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PDLKFIBB_02179 1.9e-272 pipD E Dipeptidase

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)