ORF_ID e_value Gene_name EC_number CAZy COGs Description
JGIIAPLE_00001 1.7e-07 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JGIIAPLE_00006 7.7e-09 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_00009 6.9e-16 dltB M membrane protein involved in D-alanine export
JGIIAPLE_00013 2.3e-09 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_00016 2.7e-10 yvkC 2.7.9.2 GT Phosphotransferase
JGIIAPLE_00018 3.3e-08 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
JGIIAPLE_00023 2.2e-10 yccK C Aldo keto reductase
JGIIAPLE_00024 4.5e-09 citR K Transcriptional regulator
JGIIAPLE_00028 5.9e-13 mcsA 2.7.14.1 S protein with conserved CXXC pairs
JGIIAPLE_00030 1.7e-11 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JGIIAPLE_00031 6.7e-10 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JGIIAPLE_00032 4.4e-15 menF 5.4.4.2 HQ Isochorismate synthase
JGIIAPLE_00035 2.7e-14 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JGIIAPLE_00036 2.4e-11 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
JGIIAPLE_00038 1.3e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
JGIIAPLE_00039 3.7e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JGIIAPLE_00040 4.1e-30 yazB K transcriptional
JGIIAPLE_00041 2.7e-88 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JGIIAPLE_00042 8.2e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JGIIAPLE_00043 2.6e-160 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JGIIAPLE_00044 1.6e-168 pabC 2.6.1.42, 4.1.3.38 EH 4-amino-4-deoxychorismate lyase
JGIIAPLE_00045 1.5e-106 pabA 2.6.1.85, 4.1.3.27 EH Anthranilate synthase
JGIIAPLE_00046 4.7e-271 pabB 2.6.1.85 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JGIIAPLE_00047 8.9e-170 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
JGIIAPLE_00048 3.1e-153 yacD 5.2.1.8 O peptidyl-prolyl isomerase
JGIIAPLE_00049 2.9e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JGIIAPLE_00050 1.5e-146 coaX 2.7.1.33 F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JGIIAPLE_00051 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JGIIAPLE_00052 7.9e-94 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JGIIAPLE_00053 3.5e-274 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JGIIAPLE_00054 6.7e-187 KLT serine threonine protein kinase
JGIIAPLE_00055 1.5e-124 yabS S protein containing a von Willebrand factor type A (vWA) domain
JGIIAPLE_00056 0.0 spoIIE 3.1.3.16, 3.1.3.3 KT stage II sporulation protein E
JGIIAPLE_00059 8.5e-58 yabR J RNA binding protein (contains ribosomal protein S1 domain)
JGIIAPLE_00060 1.1e-44 divIC D Septum formation initiator
JGIIAPLE_00061 3.9e-108 yabQ S spore cortex biosynthesis protein
JGIIAPLE_00062 1.5e-49 yabP S Sporulation protein YabP
JGIIAPLE_00063 1.1e-37 yabO J COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
JGIIAPLE_00064 2.7e-245 mazG 3.6.1.66, 3.6.1.9 S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
JGIIAPLE_00065 2.4e-287 yabM S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
JGIIAPLE_00066 1.5e-92 spoVT K stage V sporulation protein
JGIIAPLE_00067 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JGIIAPLE_00068 2.4e-39 yabK S Peptide ABC transporter permease
JGIIAPLE_00069 8e-105 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JGIIAPLE_00070 3.9e-97 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JGIIAPLE_00071 9.4e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JGIIAPLE_00072 6.6e-230 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JGIIAPLE_00074 4.6e-48 spoVG D Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
JGIIAPLE_00075 3.8e-63 yabJ 3.5.99.10 J translation initiation inhibitor, yjgF family
JGIIAPLE_00076 2.6e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
JGIIAPLE_00077 4.1e-161 ispE 2.1.1.182, 2.7.1.148 I Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JGIIAPLE_00078 8.3e-27 sspF S DNA topological change
JGIIAPLE_00079 7.8e-39 veg S protein conserved in bacteria
JGIIAPLE_00080 3.3e-137 yabG S peptidase
JGIIAPLE_00081 2.4e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JGIIAPLE_00082 8.4e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JGIIAPLE_00083 4.3e-194 rpfB GH23 T protein conserved in bacteria
JGIIAPLE_00084 1.8e-144 tatD L hydrolase, TatD
JGIIAPLE_00085 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JGIIAPLE_00086 8.8e-44 abrB K COG2002 Regulators of stationary sporulation gene expression
JGIIAPLE_00087 4.3e-158 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JGIIAPLE_00088 1.5e-49 yazA L endonuclease containing a URI domain
JGIIAPLE_00089 2.5e-138 yabB 2.1.1.223 S Conserved hypothetical protein 95
JGIIAPLE_00090 4.8e-31 yabA L Involved in initiation control of chromosome replication
JGIIAPLE_00091 2.1e-146 yaaT S stage 0 sporulation protein
JGIIAPLE_00092 2.2e-182 holB 2.7.7.7 L DNA polymerase III
JGIIAPLE_00093 1.5e-71 yaaR S protein conserved in bacteria
JGIIAPLE_00094 2.2e-54 yaaQ S protein conserved in bacteria
JGIIAPLE_00095 3.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JGIIAPLE_00096 1.1e-275 adiA 4.1.1.17, 4.1.1.18, 4.1.1.19 E Orn Lys Arg decarboxylase
JGIIAPLE_00097 4.5e-203 yaaN P Belongs to the TelA family
JGIIAPLE_00098 4.7e-103 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
JGIIAPLE_00099 3.4e-31 csfB S Inhibitor of sigma-G Gin
JGIIAPLE_00104 4.2e-14 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
JGIIAPLE_00106 3.1e-11 rhiB IQ polyketide synthase
JGIIAPLE_00110 2.8e-11 yxbD 3.2.2.20 K Acetyltransferase (GNAT) domain
JGIIAPLE_00111 1.8e-15 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
JGIIAPLE_00112 2.7e-13 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JGIIAPLE_00118 4.6e-07 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JGIIAPLE_00120 8.8e-13 KT May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
JGIIAPLE_00121 2.6e-08 gerAB E Spore germination protein
JGIIAPLE_00124 1.4e-16 T PhoQ Sensor
JGIIAPLE_00125 1.1e-07 lutB C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
JGIIAPLE_00130 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_00131 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_00132 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_00137 8.9e-11 srfAB Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_00140 1.6e-09 ybaR P COG0659 Sulfate permease and related transporters (MFS superfamily)
JGIIAPLE_00141 2.7e-07 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
JGIIAPLE_00142 3.1e-08 gerQ S Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
JGIIAPLE_00144 1.2e-07 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JGIIAPLE_00145 7.2e-09 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
JGIIAPLE_00153 1.9e-12 yxlA F Belongs to the purine-cytosine permease (2.A.39) family
JGIIAPLE_00154 1.9e-13 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
JGIIAPLE_00159 2.7e-182 yaaC S YaaC-like Protein
JGIIAPLE_00160 1.8e-273 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
JGIIAPLE_00161 5.2e-248 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JGIIAPLE_00162 2.2e-157 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
JGIIAPLE_00163 8e-108 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JGIIAPLE_00164 4.3e-207 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JGIIAPLE_00165 1.3e-09
JGIIAPLE_00166 2.2e-122 dck 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxycytidine kinase
JGIIAPLE_00167 3.2e-115 dgk 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxyguanosine kinase
JGIIAPLE_00168 5.6e-215 yaaH M Glycoside Hydrolase Family
JGIIAPLE_00169 2.4e-98 yaaI Q COG1335 Amidases related to nicotinamidase
JGIIAPLE_00170 1e-84 tadA 3.5.4.1, 3.5.4.3, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JGIIAPLE_00171 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JGIIAPLE_00172 5.3e-37 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JGIIAPLE_00173 3.9e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JGIIAPLE_00174 7.9e-32 yaaL S Protein of unknown function (DUF2508)
JGIIAPLE_00175 3.7e-36 bofA S Sigma-K factor-processing regulatory protein BofA
JGIIAPLE_00179 5.3e-14 T PhoQ Sensor
JGIIAPLE_00180 6.8e-15 ycdA S Domain of unknown function (DUF5105)
JGIIAPLE_00182 3.7e-07 pdaB 3.5.1.104 G Polysaccharide deacetylase
JGIIAPLE_00184 9.7e-09 manA 5.3.1.8 G mannose-6-phosphate isomerase
JGIIAPLE_00187 1.6e-07 S Ion transport 2 domain protein
JGIIAPLE_00188 2.5e-11 yuaB
JGIIAPLE_00192 1.7e-09 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
JGIIAPLE_00207 6.4e-08 ppaX 3.1.3.18, 3.6.1.1 S Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
JGIIAPLE_00208 1.4e-12 ytfP S HI0933-like protein
JGIIAPLE_00211 1.1e-07 yjcE P COG0025 NhaP-type Na H and K H antiporters
JGIIAPLE_00217 8.6e-15 ntdB 3.1.3.92 S Sucrose-6F-phosphate phosphohydrolase
JGIIAPLE_00218 7.1e-11 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGIIAPLE_00220 3.4e-39 S COG NOG14552 non supervised orthologous group
JGIIAPLE_00230 5.5e-22 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JGIIAPLE_00237 5.2e-08 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
JGIIAPLE_00239 4.7e-11 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JGIIAPLE_00249 2e-07 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JGIIAPLE_00253 6.2e-08 araR K transcriptional
JGIIAPLE_00269 7.1e-11 rsbU 3.1.3.3 KT phosphatase
JGIIAPLE_00288 6.3e-09 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
JGIIAPLE_00290 2e-09 rasP M zinc metalloprotease
JGIIAPLE_00291 6.8e-10 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
JGIIAPLE_00296 3.8e-14 cwlD 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
JGIIAPLE_00297 1.7e-07 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
JGIIAPLE_00309 1.2e-09 yfkC M Mechanosensitive ion channel
JGIIAPLE_00330 2.2e-14 dppA E D-aminopeptidase
JGIIAPLE_00331 2.8e-08 kinE 2.7.13.3 T Histidine kinase
JGIIAPLE_00333 1.5e-08 alsT E Sodium alanine symporter
JGIIAPLE_00342 1.1e-11 ltaS 2.7.8.20 M Belongs to the LTA synthase family
JGIIAPLE_00344 4.5e-13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_00345 1.1e-09 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_00346 4.5e-08 bla 3.5.2.6 V beta-lactamase
JGIIAPLE_00347 2.2e-07 yhfW CE COG0665 Glycine D-amino acid oxidases (deaminating)
JGIIAPLE_00349 2.6e-18 cydA 1.10.3.14 C oxidase, subunit
JGIIAPLE_00352 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_00353 0.0 6.3.2.14 Q amino acid activation for nonribosomal peptide biosynthetic process
JGIIAPLE_00354 2.8e-64 yngL S Protein of unknown function (DUF1360)
JGIIAPLE_00355 1.3e-306 yngK T Glycosyl hydrolase-like 10
JGIIAPLE_00357 1.8e-31 S Family of unknown function (DUF5367)
JGIIAPLE_00358 4.4e-211 yngJ 1.3.8.1, 1.3.99.12 I acyl-CoA dehydrogenase
JGIIAPLE_00359 0.0 yngI IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
JGIIAPLE_00360 3e-251 yngH 6.3.4.14, 6.4.1.2, 6.4.1.3, 6.4.1.4 I Biotin carboxylase
JGIIAPLE_00361 6e-32 pycB 2.3.1.12, 6.4.1.1 I Biotin carboxyl carrier protein
JGIIAPLE_00362 8e-168 mvaB 4.1.3.4, 6.4.1.4 E Hydroxymethylglutaryl-CoA lyase
JGIIAPLE_00363 2.2e-137 yngF 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
JGIIAPLE_00364 6.3e-290 yngE 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
JGIIAPLE_00365 1.9e-233 nrnB S phosphohydrolase (DHH superfamily)
JGIIAPLE_00366 5.5e-104 yngC S membrane-associated protein
JGIIAPLE_00367 4.1e-164 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
JGIIAPLE_00368 2.4e-80 yngA S membrane
JGIIAPLE_00369 4.4e-299 xynD3 3.2.1.55 CBM6,GH43 G Belongs to the glycosyl hydrolase 43 family
JGIIAPLE_00370 3.7e-251 xynC 3.2.1.136 GH5 M Belongs to the glycosyl hydrolase 30 family
JGIIAPLE_00372 2.4e-297 bglC5 3.2.1.4 GH5,GH9 G PFAM glycoside hydrolase family 5
JGIIAPLE_00373 8.2e-252 agcS E Sodium alanine symporter
JGIIAPLE_00374 1.3e-57 ynfC
JGIIAPLE_00375 2.3e-12
JGIIAPLE_00376 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JGIIAPLE_00377 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JGIIAPLE_00378 6.6e-69 yccU S CoA-binding protein
JGIIAPLE_00379 5e-94 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JGIIAPLE_00380 4.1e-49 yneR S Belongs to the HesB IscA family
JGIIAPLE_00381 1.3e-53 yneQ
JGIIAPLE_00382 1.2e-73 yneP S Thioesterase-like superfamily
JGIIAPLE_00383 3.9e-35 tlp S Belongs to the Tlp family
JGIIAPLE_00384 3.1e-08 sspN S Small acid-soluble spore protein N family
JGIIAPLE_00386 4.1e-92 yneN CO alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JGIIAPLE_00387 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JGIIAPLE_00388 2.2e-14 sspO S Belongs to the SspO family
JGIIAPLE_00389 3.9e-19 sspP S Belongs to the SspP family
JGIIAPLE_00390 4.1e-65 hspX O Spore coat protein
JGIIAPLE_00391 4.2e-74 yneK S Protein of unknown function (DUF2621)
JGIIAPLE_00392 5.1e-76 yneJ O COG4846 Membrane protein involved in cytochrome C biogenesis
JGIIAPLE_00393 7.2e-59 cheB 3.1.1.61, 3.5.1.44 T cheY-homologous receiver domain
JGIIAPLE_00394 7.1e-127 ccdA O cytochrome c biogenesis protein
JGIIAPLE_00395 7.5e-14 ynzD S Spo0E like sporulation regulatory protein
JGIIAPLE_00396 1.8e-28 yneF S UPF0154 protein
JGIIAPLE_00397 2.2e-81 yneE S Sporulation inhibitor of replication protein sirA
JGIIAPLE_00398 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JGIIAPLE_00399 1.3e-32 ynzC S UPF0291 protein
JGIIAPLE_00400 9.2e-113 yneB L resolvase
JGIIAPLE_00401 3.4e-49 yneA D Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
JGIIAPLE_00402 2.6e-109 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JGIIAPLE_00404 2e-79 fosB 2.5.1.18 H Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
JGIIAPLE_00405 5.8e-74 yndM S Protein of unknown function (DUF2512)
JGIIAPLE_00406 8.6e-139 yndL S Replication protein
JGIIAPLE_00408 0.0 yndJ S YndJ-like protein
JGIIAPLE_00409 2.6e-117 yndH S Domain of unknown function (DUF4166)
JGIIAPLE_00410 7.7e-154 yndG S DoxX-like family
JGIIAPLE_00411 4.2e-220 gerLC S Spore germination protein
JGIIAPLE_00412 4.5e-197 gerAB U Spore germination
JGIIAPLE_00413 5.7e-286 gerAA EG Spore germination protein
JGIIAPLE_00416 5.2e-80 yndB S Activator of Hsp90 ATPase homolog 1-like protein
JGIIAPLE_00417 1.8e-71
JGIIAPLE_00418 7.9e-25 tatA U protein secretion
JGIIAPLE_00421 1.3e-134 S Domain of unknown function, YrpD
JGIIAPLE_00423 1.2e-165 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JGIIAPLE_00425 5.2e-15
JGIIAPLE_00426 4.9e-78 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
JGIIAPLE_00427 6.3e-84 yncE S Protein of unknown function (DUF2691)
JGIIAPLE_00428 2.7e-219 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JGIIAPLE_00429 3.5e-247 iolT EGP Major facilitator Superfamily
JGIIAPLE_00430 1.4e-113 yokF 3.1.31.1 L RNA catabolic process
JGIIAPLE_00431 6e-293 xylB 2.7.1.12, 2.7.1.17, 2.7.1.5 G xylulose kinase
JGIIAPLE_00432 4e-264 xylA 5.3.1.5 G Belongs to the xylose isomerase family
JGIIAPLE_00433 1e-215 xylR GK ROK family
JGIIAPLE_00434 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
JGIIAPLE_00435 2.7e-255 xynT G MFS/sugar transport protein
JGIIAPLE_00436 1.1e-83 XK27_05370 5.3.1.24 E phosphoribosylanthranilate isomerase activity
JGIIAPLE_00438 6.4e-60 ynaF
JGIIAPLE_00439 1.9e-123 ynaE S Domain of unknown function (DUF3885)
JGIIAPLE_00440 2e-99 ynaD J Acetyltransferase (GNAT) domain
JGIIAPLE_00441 4.9e-145 ynaC
JGIIAPLE_00442 6.8e-80 G regulation of fungal-type cell wall biogenesis
JGIIAPLE_00443 5.8e-39
JGIIAPLE_00444 2.5e-32
JGIIAPLE_00445 5e-10
JGIIAPLE_00446 7e-261 glnA 6.3.1.2 E glutamine synthetase
JGIIAPLE_00447 1.1e-68 glnR K transcriptional
JGIIAPLE_00448 3.3e-244 ynbB 4.4.1.1 P COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
JGIIAPLE_00449 5.5e-231 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JGIIAPLE_00450 1.7e-176 spoVK O stage V sporulation protein K
JGIIAPLE_00451 8e-116 cwlC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
JGIIAPLE_00452 2e-109 ymaB
JGIIAPLE_00453 4.5e-188 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JGIIAPLE_00454 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JGIIAPLE_00455 1.9e-49 nrdI 1.17.4.1 F Probably involved in ribonucleotide reductase function
JGIIAPLE_00456 4.5e-22 ymzA
JGIIAPLE_00457 6.3e-23
JGIIAPLE_00458 1.9e-33 hfq J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
JGIIAPLE_00459 9.3e-175 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JGIIAPLE_00460 2.1e-46 ymaF S YmaF family
JGIIAPLE_00462 4.9e-51 ebrA P Small Multidrug Resistance protein
JGIIAPLE_00463 4.7e-55 ebrB P COG2076 Membrane transporters of cations and cationic drugs
JGIIAPLE_00464 5.4e-80 ymaD O redox protein, regulator of disulfide bond formation
JGIIAPLE_00465 2.1e-126 ymaC S Replication protein
JGIIAPLE_00466 4.6e-252 aprX O Belongs to the peptidase S8 family
JGIIAPLE_00467 6.6e-164 ymaE S Metallo-beta-lactamase superfamily
JGIIAPLE_00468 1.2e-61 ymzB
JGIIAPLE_00469 2.5e-233 cypA C Cytochrome P450
JGIIAPLE_00470 0.0 pks13 HQ Beta-ketoacyl synthase
JGIIAPLE_00471 0.0 dhbF IQ polyketide synthase
JGIIAPLE_00472 0.0 pfaA 4.1.1.35 GT4 IQ polyketide synthase
JGIIAPLE_00473 0.0 pfaA Q Polyketide synthase of type I
JGIIAPLE_00474 0.0 rhiB IQ polyketide synthase
JGIIAPLE_00475 2.7e-137 pksI I Belongs to the enoyl-CoA hydratase isomerase family
JGIIAPLE_00476 2.6e-143 pksH 4.2.1.18 I enoyl-CoA hydratase
JGIIAPLE_00477 1.3e-245 pksG 2.3.3.10 I synthase
JGIIAPLE_00478 2.7e-238 pksF 2.3.1.179, 2.3.1.41 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
JGIIAPLE_00479 1.4e-37 acpK IQ Phosphopantetheine attachment site
JGIIAPLE_00480 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
JGIIAPLE_00481 2.4e-186 pksD Q Acyl transferase domain
JGIIAPLE_00482 2.6e-163 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
JGIIAPLE_00483 2.5e-129 pksB 3.1.2.6 S Polyketide biosynthesis
JGIIAPLE_00484 4.4e-109 pksA K Transcriptional regulator
JGIIAPLE_00485 1.2e-97 ymcC S Membrane
JGIIAPLE_00487 2.3e-70 S Regulatory protein YrvL
JGIIAPLE_00488 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JGIIAPLE_00489 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JGIIAPLE_00490 2.2e-88 cotE S Spore coat protein
JGIIAPLE_00491 9.2e-69 ymcA 3.6.3.21 S Belongs to the UPF0342 family
JGIIAPLE_00492 2.7e-296 miaB 2.8.4.3 J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JGIIAPLE_00493 6.5e-218 kbl 2.3.1.29, 2.3.1.47 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
JGIIAPLE_00494 2.7e-199 tdh 1.1.1.103 C Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
JGIIAPLE_00495 1.2e-36 spoVS S Stage V sporulation protein S
JGIIAPLE_00496 1.9e-152 ymdB S protein conserved in bacteria
JGIIAPLE_00497 2.1e-224 rny S Endoribonuclease that initiates mRNA decay
JGIIAPLE_00498 1e-215 pbpX V Beta-lactamase
JGIIAPLE_00499 8.1e-188 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JGIIAPLE_00500 1.9e-236 cinA 3.5.1.42 S Belongs to the CinA family
JGIIAPLE_00501 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JGIIAPLE_00502 1.9e-124 ymfM S protein conserved in bacteria
JGIIAPLE_00503 1.8e-142 ymfK S Protein of unknown function (DUF3388)
JGIIAPLE_00504 4.8e-41 ymfJ S Protein of unknown function (DUF3243)
JGIIAPLE_00505 9.2e-130 ymfI 1.1.1.100, 1.3.1.28 S Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
JGIIAPLE_00506 1.4e-242 ymfH S zinc protease
JGIIAPLE_00507 2.6e-236 ymfF S Peptidase M16
JGIIAPLE_00508 1.5e-206 ymfD EGP Major facilitator Superfamily
JGIIAPLE_00509 1.4e-133 ymfC K Transcriptional regulator
JGIIAPLE_00510 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
JGIIAPLE_00511 4.4e-32 S YlzJ-like protein
JGIIAPLE_00512 5.3e-133 tepA 3.4.21.92 OU COG0740 Protease subunit of ATP-dependent Clp proteases
JGIIAPLE_00513 1.9e-308 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JGIIAPLE_00514 1.4e-156 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JGIIAPLE_00515 5.9e-222 dapG 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
JGIIAPLE_00516 1.4e-192 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JGIIAPLE_00517 4.3e-109 spoVFB H Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
JGIIAPLE_00518 2.9e-162 spoVFA 1.1.1.29, 1.1.1.399, 1.1.1.95 CH Dipicolinate synthase subunit A
JGIIAPLE_00519 2.6e-42 ymxH S YlmC YmxH family
JGIIAPLE_00520 4.4e-233 pepR S Belongs to the peptidase M16 family
JGIIAPLE_00521 4.2e-183 ylxY 3.5.1.104 G Sporulation protein, polysaccharide deacetylase
JGIIAPLE_00522 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
JGIIAPLE_00523 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JGIIAPLE_00524 6.1e-182 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
JGIIAPLE_00525 1.3e-173 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JGIIAPLE_00526 5e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JGIIAPLE_00527 3e-44 ylxP S protein conserved in bacteria
JGIIAPLE_00528 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JGIIAPLE_00529 3.1e-47 ylxQ J ribosomal protein
JGIIAPLE_00530 3.4e-32 ylxR K nucleic-acid-binding protein implicated in transcription termination
JGIIAPLE_00531 1.1e-203 nusA K Participates in both transcription termination and antitermination
JGIIAPLE_00532 3.3e-80 rimP S Required for maturation of 30S ribosomal subunits
JGIIAPLE_00533 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JGIIAPLE_00534 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JGIIAPLE_00535 7.7e-233 rasP M zinc metalloprotease
JGIIAPLE_00536 4.6e-216 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
JGIIAPLE_00537 1.2e-138 cdsA 2.7.7.41 S Belongs to the CDS family
JGIIAPLE_00538 8.3e-145 uppS 2.5.1.31 I Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JGIIAPLE_00539 6.4e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JGIIAPLE_00540 2.7e-126 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
JGIIAPLE_00541 6.3e-157 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JGIIAPLE_00542 1e-131 rpsB J Belongs to the universal ribosomal protein uS2 family
JGIIAPLE_00543 4.3e-78 ylxL
JGIIAPLE_00544 5.6e-138 sigD K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JGIIAPLE_00545 1.1e-86 cheD 3.5.1.44 NT Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
JGIIAPLE_00546 1.3e-111 cheC NT COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
JGIIAPLE_00547 2.8e-79 cheW NT COG0835 Chemotaxis signal transduction protein
JGIIAPLE_00548 0.0 cheA 2.7.13.3 NT COG0643 Chemotaxis protein histidine kinase and related kinases
JGIIAPLE_00549 5.8e-197 cheB 3.1.1.61, 3.5.1.44 NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
JGIIAPLE_00550 7.5e-158 flhG D Belongs to the ParA family
JGIIAPLE_00551 5.2e-201 flhF N Flagellar biosynthesis regulator FlhF
JGIIAPLE_00552 0.0 flhA N Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JGIIAPLE_00553 1.4e-190 flhB N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JGIIAPLE_00554 3.6e-132 fliR N Flagellar biosynthetic protein FliR
JGIIAPLE_00555 2.2e-36 fliQ N Role in flagellar biosynthesis
JGIIAPLE_00556 1.6e-109 fliP N Plays a role in the flagellum-specific transport system
JGIIAPLE_00557 9.3e-97 fliZ N Flagellar biosynthesis protein, FliO
JGIIAPLE_00558 1.6e-58 cheB 3.1.1.61, 3.5.1.44 T response regulator
JGIIAPLE_00559 4.5e-184 fliN N FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JGIIAPLE_00560 1.9e-181 fliM N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
JGIIAPLE_00561 4.6e-49 fliL N Controls the rotational direction of flagella during chemotaxis
JGIIAPLE_00562 8.2e-140 flgG N Flagellar basal body rod
JGIIAPLE_00563 1.7e-72 flgD N Flagellar basal body rod modification protein
JGIIAPLE_00564 1.2e-221 fliK N Flagellar hook-length control protein
JGIIAPLE_00565 7.7e-37 ylxF S MgtE intracellular N domain
JGIIAPLE_00566 1.5e-69 fliJ N Flagellar biosynthesis chaperone
JGIIAPLE_00567 2.5e-242 fliI 3.6.3.14 NU COG1157 Flagellar biosynthesis type III secretory pathway ATPase
JGIIAPLE_00568 2.5e-106 fliH NU COG1317 Flagellar biosynthesis type III secretory pathway protein
JGIIAPLE_00569 2e-178 fliG N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
JGIIAPLE_00570 5.9e-218 fliF N The M ring may be actively involved in energy transduction
JGIIAPLE_00571 7.2e-29 fliF N The M ring may be actively involved in energy transduction
JGIIAPLE_00572 1.9e-31 fliE N Flagellar hook-basal body
JGIIAPLE_00573 6.9e-75 flgC N Belongs to the flagella basal body rod proteins family
JGIIAPLE_00574 2.3e-63 flgB N Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
JGIIAPLE_00575 9.2e-136 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JGIIAPLE_00576 1.5e-250 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JGIIAPLE_00577 4.4e-92 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JGIIAPLE_00578 2.5e-169 xerC L tyrosine recombinase XerC
JGIIAPLE_00579 7.4e-247 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JGIIAPLE_00580 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JGIIAPLE_00581 1.7e-170 dprA LU Rossmann fold nucleotide-binding protein involved in DNA uptake
JGIIAPLE_00582 1.1e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JGIIAPLE_00583 3.4e-211 sucC 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
JGIIAPLE_00584 3e-44 ylqH S homolog of the cytoplasmic domain of flagellar protein FhlB
JGIIAPLE_00585 8.5e-291 ylqG
JGIIAPLE_00586 4.1e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JGIIAPLE_00587 4.2e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JGIIAPLE_00588 1.4e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JGIIAPLE_00589 9.2e-138 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
JGIIAPLE_00590 5.3e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JGIIAPLE_00591 1.3e-61 ylqD S YlqD protein
JGIIAPLE_00592 1.2e-36 ylqC S Belongs to the UPF0109 family
JGIIAPLE_00593 1.1e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
JGIIAPLE_00594 6e-236 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JGIIAPLE_00595 1.6e-49 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JGIIAPLE_00596 2.9e-87
JGIIAPLE_00597 8.8e-176 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JGIIAPLE_00598 0.0 smc D Required for chromosome condensation and partitioning
JGIIAPLE_00599 1.2e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JGIIAPLE_00600 2.8e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JGIIAPLE_00601 6.1e-129 IQ reductase
JGIIAPLE_00602 9.1e-170 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
JGIIAPLE_00603 4.3e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
JGIIAPLE_00604 4e-80 fapR 5.3.1.23 K Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
JGIIAPLE_00605 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JGIIAPLE_00606 9.3e-156 sdaAA 4.3.1.17 E L-serine dehydratase
JGIIAPLE_00607 1.9e-118 sdaAB 4.3.1.17 E L-serine dehydratase
JGIIAPLE_00608 2.7e-302 yloV S kinase related to dihydroxyacetone kinase
JGIIAPLE_00609 5.5e-59 asp S protein conserved in bacteria
JGIIAPLE_00610 4.2e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
JGIIAPLE_00611 3.1e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
JGIIAPLE_00612 4.2e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
JGIIAPLE_00613 8.6e-170 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
JGIIAPLE_00614 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
JGIIAPLE_00615 2.4e-141 stp 3.1.3.16 T phosphatase
JGIIAPLE_00616 4.8e-207 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
JGIIAPLE_00617 2.9e-254 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JGIIAPLE_00618 3.8e-176 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JGIIAPLE_00619 6e-85 def 2.1.2.9, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JGIIAPLE_00620 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JGIIAPLE_00621 8.8e-226 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JGIIAPLE_00622 2.2e-28 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
JGIIAPLE_00623 3.1e-110 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
JGIIAPLE_00624 1.5e-40 ylzA S Belongs to the UPF0296 family
JGIIAPLE_00625 2.4e-156 yloC S stress-induced protein
JGIIAPLE_00626 0.0 yloB 3.6.3.8 P COG0474 Cation transport ATPase
JGIIAPLE_00627 0.0 FbpA K RNA-binding protein homologous to eukaryotic snRNP
JGIIAPLE_00628 4.3e-83 cysG 1.3.1.76, 4.99.1.4 H Siroheme synthase
JGIIAPLE_00629 2e-146 cbiX 4.99.1.3, 4.99.1.4, 5.4.99.60, 5.4.99.61 S Sirohydrochlorin ferrochelatase
JGIIAPLE_00630 2.2e-145 hemD 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
JGIIAPLE_00631 7.3e-109 cysC 2.7.1.25 P Catalyzes the synthesis of activated sulfate
JGIIAPLE_00632 1.3e-223 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
JGIIAPLE_00633 1.1e-179 cysP P phosphate transporter
JGIIAPLE_00634 3.5e-142 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
JGIIAPLE_00636 2.9e-116 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JGIIAPLE_00637 8e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
JGIIAPLE_00638 2.9e-176 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JGIIAPLE_00639 4.8e-145 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
JGIIAPLE_00640 0.0 carB 6.3.5.5 F Belongs to the CarB family
JGIIAPLE_00641 5e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
JGIIAPLE_00642 1.7e-251 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JGIIAPLE_00643 1.4e-167 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
JGIIAPLE_00644 9e-232 pyrP F Xanthine uracil
JGIIAPLE_00645 2.7e-94 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JGIIAPLE_00646 1.1e-164 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JGIIAPLE_00647 1.8e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JGIIAPLE_00648 1.3e-63 dksA T COG1734 DnaK suppressor protein
JGIIAPLE_00649 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JGIIAPLE_00650 2.6e-67 divIVA D Cell division initiation protein
JGIIAPLE_00651 6.7e-139 ylmH 5.4.99.23, 5.4.99.24 S conserved protein, contains S4-like domain
JGIIAPLE_00652 1.3e-39 yggT S membrane
JGIIAPLE_00653 1.4e-62 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
JGIIAPLE_00654 2.9e-125 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JGIIAPLE_00655 1.1e-158 yfiH S Belongs to the multicopper oxidase YfiH RL5 family
JGIIAPLE_00656 2.4e-37 ylmC S sporulation protein
JGIIAPLE_00657 1.3e-256 argE 3.5.1.16 E Acetylornithine deacetylase
JGIIAPLE_00658 1.1e-147 modF 3.6.3.21, 3.6.3.34 P COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
JGIIAPLE_00659 3.6e-140 sigG K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JGIIAPLE_00660 1.4e-125 sigE K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JGIIAPLE_00661 4.4e-172 spoIIGA M aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
JGIIAPLE_00662 0.0 bpr O COG1404 Subtilisin-like serine proteases
JGIIAPLE_00663 2e-203 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JGIIAPLE_00664 2.4e-229 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
JGIIAPLE_00665 6.2e-58 sbp S small basic protein
JGIIAPLE_00666 1e-102 ylxX S protein conserved in bacteria
JGIIAPLE_00667 2.4e-103 ylxW S protein conserved in bacteria
JGIIAPLE_00668 2.6e-138 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
JGIIAPLE_00669 5.3e-167 murB 1.3.1.98 M cell wall formation
JGIIAPLE_00670 2.3e-201 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JGIIAPLE_00671 5.7e-186 spoVE D Belongs to the SEDS family
JGIIAPLE_00672 2.6e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JGIIAPLE_00673 3.2e-170 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JGIIAPLE_00674 5.2e-281 murE 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JGIIAPLE_00675 0.0 ftsI 3.4.16.4 M stage V sporulation protein D
JGIIAPLE_00676 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
JGIIAPLE_00677 3.7e-44 ftsL D Essential cell division protein
JGIIAPLE_00678 6.6e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JGIIAPLE_00679 2.9e-78 mraZ K Belongs to the MraZ family
JGIIAPLE_00680 2.9e-309 bshC S Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
JGIIAPLE_00681 7.3e-169 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JGIIAPLE_00682 4e-89 ylbP K n-acetyltransferase
JGIIAPLE_00683 6.8e-75 ylbO S SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
JGIIAPLE_00684 1.2e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
JGIIAPLE_00685 1.3e-90 yceD S metal-binding, possibly nucleic acid-binding protein
JGIIAPLE_00687 2.8e-235 ylbM S Belongs to the UPF0348 family
JGIIAPLE_00688 6.8e-187 ylbL T Belongs to the peptidase S16 family
JGIIAPLE_00689 7.5e-138 ylbK S esterase of the alpha-beta hydrolase superfamily
JGIIAPLE_00690 3.8e-221 ylbJ S Sporulation integral membrane protein YlbJ
JGIIAPLE_00691 3.9e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JGIIAPLE_00692 1.9e-98 rsmD 2.1.1.171 L Methyltransferase
JGIIAPLE_00693 7.5e-39 ylbG S UPF0298 protein
JGIIAPLE_00694 1.8e-75 ylbF S Belongs to the UPF0342 family
JGIIAPLE_00695 6.7e-37 ylbE S YlbE-like protein
JGIIAPLE_00696 4.1e-63 ylbD S Putative coat protein
JGIIAPLE_00697 3e-201 ylbC S protein with SCP PR1 domains
JGIIAPLE_00698 2.6e-74 ylbB T COG0517 FOG CBS domain
JGIIAPLE_00699 7e-62 ylbA S YugN-like family
JGIIAPLE_00700 3e-167 ctaG S cytochrome c oxidase
JGIIAPLE_00701 4.2e-53 ctaF 1.10.3.12, 1.9.3.1 C COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
JGIIAPLE_00702 3.3e-112 cyoC 1.10.3.12, 1.9.3.1 C COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
JGIIAPLE_00703 0.0 ctaD 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JGIIAPLE_00704 6.2e-191 ctaC 1.9.3.1 C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
JGIIAPLE_00705 3.2e-164 ctaB 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
JGIIAPLE_00706 2.6e-166 ctaA 2.5.1.141 O Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
JGIIAPLE_00707 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JGIIAPLE_00708 4.5e-214 ftsW D Belongs to the SEDS family
JGIIAPLE_00709 8.7e-44 ylaN S Belongs to the UPF0358 family
JGIIAPLE_00710 1.6e-171 glsA 3.5.1.2 E Belongs to the glutaminase family
JGIIAPLE_00711 2.7e-85 ylaL S Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JGIIAPLE_00712 8e-249 phoH T ATPase related to phosphate starvation-inducible protein PhoH
JGIIAPLE_00713 1.1e-89 ylaJ S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
JGIIAPLE_00714 2.5e-32 ylaI S protein conserved in bacteria
JGIIAPLE_00715 4.2e-47 ylaH S YlaH-like protein
JGIIAPLE_00716 0.0 typA T GTP-binding protein TypA
JGIIAPLE_00717 8.2e-22 S Family of unknown function (DUF5325)
JGIIAPLE_00718 1.8e-38 ylaE
JGIIAPLE_00719 1.2e-11 sigC S Putative zinc-finger
JGIIAPLE_00720 2.7e-91 ylaC K Belongs to the sigma-70 factor family. ECF subfamily
JGIIAPLE_00721 2.7e-42 ylaB
JGIIAPLE_00722 0.0 ylaA
JGIIAPLE_00723 2.2e-293 mpl 3.4.24.28, 3.4.24.29 E Peptidase M4
JGIIAPLE_00724 6.5e-173 Q Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JGIIAPLE_00725 6.9e-78 ykzC S Acetyltransferase (GNAT) family
JGIIAPLE_00726 4.6e-151 suhB 3.1.3.25 G Inositol monophosphatase
JGIIAPLE_00727 7.1e-26 ykzI
JGIIAPLE_00728 7.1e-118 yktB S Belongs to the UPF0637 family
JGIIAPLE_00729 1.6e-42 yktA S Belongs to the UPF0223 family
JGIIAPLE_00730 3.5e-277 speA 4.1.1.19 E Arginine
JGIIAPLE_00731 1.3e-63 slp CO COG0526, thiol-disulfide isomerase and thioredoxins
JGIIAPLE_00732 2.4e-243 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
JGIIAPLE_00733 9.9e-231 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
JGIIAPLE_00734 2.9e-179 pdhB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
JGIIAPLE_00735 9.9e-192 pdhA 1.2.4.1, 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
JGIIAPLE_00736 2e-115 recN L Putative cell-wall binding lipoprotein
JGIIAPLE_00738 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JGIIAPLE_00739 1.4e-147 ykrA S hydrolases of the HAD superfamily
JGIIAPLE_00740 8.2e-31 ykzG S Belongs to the UPF0356 family
JGIIAPLE_00741 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JGIIAPLE_00742 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
JGIIAPLE_00743 4e-116 ktrA P COG0569 K transport systems, NAD-binding component
JGIIAPLE_00744 1.6e-162 ykqA P Gamma-glutamyl cyclotransferase, AIG2-like
JGIIAPLE_00745 2.7e-241 kinC 2.7.13.3 T COG0642 Signal transduction histidine kinase
JGIIAPLE_00746 1.5e-43 abrB K of stationary sporulation gene expression
JGIIAPLE_00747 7.7e-183 mreB D Rod-share determining protein MreBH
JGIIAPLE_00748 1.1e-12 S Uncharacterized protein YkpC
JGIIAPLE_00749 2e-238 ampS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
JGIIAPLE_00750 1.5e-169 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JGIIAPLE_00751 5.8e-310 ybiT S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
JGIIAPLE_00752 8.1e-39 ykoA
JGIIAPLE_00753 4.8e-105 sipT 3.4.21.89 U Belongs to the peptidase S26 family
JGIIAPLE_00754 0.0 fruA 2.7.1.202 GT COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
JGIIAPLE_00755 6.2e-168 fruK 2.7.1.11, 2.7.1.56 G Belongs to the carbohydrate kinase PfkB family
JGIIAPLE_00756 3.1e-136 fruR K Transcriptional regulator
JGIIAPLE_00757 2.1e-211 yknZ V COG0577 ABC-type antimicrobial peptide transport system, permease component
JGIIAPLE_00758 2.5e-124 macB V ABC transporter, ATP-binding protein
JGIIAPLE_00759 3e-159 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JGIIAPLE_00760 1e-117 yknW S Yip1 domain
JGIIAPLE_00761 0.0 yknV V COG1132 ABC-type multidrug transport system, ATPase and permease components
JGIIAPLE_00762 0.0 yknU V COG1132 ABC-type multidrug transport system, ATPase and permease components
JGIIAPLE_00763 2.8e-32 moaD 2.8.1.12 H Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
JGIIAPLE_00764 8.5e-84 moaE 2.8.1.12 H COG0314 Molybdopterin converting factor, large subunit
JGIIAPLE_00765 9.9e-94 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
JGIIAPLE_00766 8.1e-246 moeA 2.10.1.1 H molybdopterin
JGIIAPLE_00767 5.3e-192 moeB 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
JGIIAPLE_00768 3.9e-110 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
JGIIAPLE_00769 2.9e-147 yknT
JGIIAPLE_00770 5.8e-95 rok K Repressor of ComK
JGIIAPLE_00771 4.4e-82 ykuV CO thiol-disulfide
JGIIAPLE_00772 3.9e-101 ykuU O Alkyl hydroperoxide reductase
JGIIAPLE_00773 8.8e-142 ykuT M Mechanosensitive ion channel
JGIIAPLE_00774 9e-37 ykuS S Belongs to the UPF0180 family
JGIIAPLE_00775 5.8e-216 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
JGIIAPLE_00776 1.1e-74 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
JGIIAPLE_00777 3.2e-80 fld C Flavodoxin
JGIIAPLE_00778 3.2e-177 ykuO
JGIIAPLE_00779 5.7e-88 fld C Flavodoxin domain
JGIIAPLE_00780 3.5e-168 ccpC K Transcriptional regulator
JGIIAPLE_00781 1.6e-76 ykuL S CBS domain
JGIIAPLE_00782 3.9e-27 ykzF S Antirepressor AbbA
JGIIAPLE_00783 4.4e-94 ykuK S Ribonuclease H-like
JGIIAPLE_00784 3.9e-37 ykuJ S protein conserved in bacteria
JGIIAPLE_00785 5.2e-234 ykuI T Diguanylate phosphodiesterase
JGIIAPLE_00787 1.7e-93 M Peptidoglycan-binding domain 1 protein
JGIIAPLE_00788 0.0 3.2.1.132 M Putative peptidoglycan binding domain
JGIIAPLE_00789 2.2e-142 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_00790 9.4e-166 ykuE S Metallophosphoesterase
JGIIAPLE_00791 4.6e-88 ykuD S protein conserved in bacteria
JGIIAPLE_00792 1.6e-238 ykuC EGP Major facilitator Superfamily
JGIIAPLE_00793 1.7e-84 ykyB S YkyB-like protein
JGIIAPLE_00794 1.6e-168 cheV 2.7.13.3 T Chemotaxis protein CheV
JGIIAPLE_00795 2.2e-15
JGIIAPLE_00796 8e-224 patA 2.6.1.1 E Aminotransferase
JGIIAPLE_00797 0.0 pilS 2.7.13.3 T Histidine kinase
JGIIAPLE_00798 0.0 mrdA 3.4.16.4 M Penicillin-binding Protein
JGIIAPLE_00799 8e-124 ykwD J protein with SCP PR1 domains
JGIIAPLE_00800 5e-159 glxR 1.1.1.31, 1.1.1.60 I COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
JGIIAPLE_00801 2e-264 mcpC NT chemotaxis protein
JGIIAPLE_00802 1.2e-131 ykwB 2.3.1.1 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JGIIAPLE_00803 2.6e-202 splB 4.1.99.14 L Spore photoproduct lyase
JGIIAPLE_00804 7.2e-39 splA S Transcriptional regulator
JGIIAPLE_00805 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JGIIAPLE_00806 2.1e-39 ptsH G phosphocarrier protein HPr
JGIIAPLE_00807 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JGIIAPLE_00808 4.5e-128 glcT K antiterminator
JGIIAPLE_00810 9.8e-180 ykvZ 5.1.1.1 K Transcriptional regulator
JGIIAPLE_00811 8.7e-209 pepQ 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
JGIIAPLE_00812 3.8e-09
JGIIAPLE_00813 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
JGIIAPLE_00814 4.9e-90 stoA CO thiol-disulfide
JGIIAPLE_00815 9.9e-239 ykvU S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
JGIIAPLE_00816 1.7e-103 ykvT 3.5.1.28 M Cell Wall Hydrolase
JGIIAPLE_00817 2.8e-28
JGIIAPLE_00818 6e-25 ykvS S protein conserved in bacteria
JGIIAPLE_00819 5.6e-46 ykvR S Protein of unknown function (DUF3219)
JGIIAPLE_00820 8.5e-133 G Glycosyl hydrolases family 18
JGIIAPLE_00821 1.2e-35 3.5.1.104 M LysM domain
JGIIAPLE_00822 2.7e-76 ykvP 3.5.1.28 M Glycosyl transferases group 1
JGIIAPLE_00823 1.1e-147 ykvP 3.5.1.28 M Glycosyl transferases group 1
JGIIAPLE_00824 8.2e-134 IQ Enoyl-(Acyl carrier protein) reductase
JGIIAPLE_00825 2e-61 ykvN K Transcriptional regulator
JGIIAPLE_00826 2e-96 queF 1.7.1.13 S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JGIIAPLE_00827 1.3e-139 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
JGIIAPLE_00828 2.8e-81 queD 4.1.2.50, 4.2.3.12 H synthase
JGIIAPLE_00829 7.3e-126 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JGIIAPLE_00830 8.7e-182 ykvI S membrane
JGIIAPLE_00831 0.0 clpE O Belongs to the ClpA ClpB family
JGIIAPLE_00832 2.7e-138 motA N flagellar motor
JGIIAPLE_00833 2.5e-125 motB N Flagellar motor protein
JGIIAPLE_00834 1.3e-75 ykvE K transcriptional
JGIIAPLE_00835 2.5e-275 kinD 2.7.13.3 T COG0642 Signal transduction histidine kinase
JGIIAPLE_00836 1.4e-64 eag
JGIIAPLE_00837 6.4e-09 S Spo0E like sporulation regulatory protein
JGIIAPLE_00838 1.3e-51 XK27_09985 S Protein of unknown function (DUF1232)
JGIIAPLE_00839 1.3e-96 mtnD 1.13.11.53, 1.13.11.54 S Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
JGIIAPLE_00840 7.2e-115 mtnB 3.1.3.87, 4.1.2.17, 4.2.1.109, 5.1.3.4 E Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
JGIIAPLE_00841 7.5e-137 mtnX 3.1.3.87, 4.2.1.109 E Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
JGIIAPLE_00842 4.1e-231 mtnW 5.3.2.5 G Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
JGIIAPLE_00843 8e-232 mtnE 2.6.1.83 E Aminotransferase
JGIIAPLE_00844 3.5e-151 mtnU 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
JGIIAPLE_00845 7.5e-230 mtnK 2.7.1.100 F Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
JGIIAPLE_00846 3.3e-197 mtnA 5.3.1.23 E Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
JGIIAPLE_00848 7e-89 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JGIIAPLE_00849 0.0 kinE 2.7.13.3 T Histidine kinase
JGIIAPLE_00850 6.5e-190 ykrP G COG3594 Fucose 4-O-acetylase and related acetyltransferases
JGIIAPLE_00851 4.5e-22 ykzE
JGIIAPLE_00852 1.2e-10 ydfR S Protein of unknown function (DUF421)
JGIIAPLE_00853 1.7e-233 ktrB P COG0168 Trk-type K transport systems, membrane components
JGIIAPLE_00854 7e-156 htpX O Belongs to the peptidase M48B family
JGIIAPLE_00855 1.5e-124 ykrK S Domain of unknown function (DUF1836)
JGIIAPLE_00856 1.9e-26 sspD S small acid-soluble spore protein
JGIIAPLE_00857 8.2e-117 rsgI S Anti-sigma factor N-terminus
JGIIAPLE_00858 9.5e-130 sigI K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JGIIAPLE_00859 2.1e-177 ykoY P COG0861 Membrane protein TerC, possibly involved in tellurium resistance
JGIIAPLE_00860 1.4e-116 ykoX S membrane-associated protein
JGIIAPLE_00861 0.0 ydcR 2.7.7.65 T Diguanylate cyclase
JGIIAPLE_00862 3.2e-161 ku L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
JGIIAPLE_00863 0.0 ligD 6.5.1.1 L ATP-dependent DNA ligase
JGIIAPLE_00864 2.5e-186 ykoT GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
JGIIAPLE_00865 0.0 ykoS
JGIIAPLE_00866 7.1e-155 ykoQ S Calcineurin-like phosphoesterase superfamily domain
JGIIAPLE_00867 3.7e-99 ykoP G polysaccharide deacetylase
JGIIAPLE_00868 2.3e-220 ugtP 2.4.1.315 GT28 M COG0707 UDP-N-acetylglucosamine LPS N-acetylglucosamine transferase
JGIIAPLE_00869 1.3e-81 mhqR K transcriptional
JGIIAPLE_00870 6.9e-26 ykoL
JGIIAPLE_00871 5.9e-18
JGIIAPLE_00872 1.4e-53 tnrA K transcriptional
JGIIAPLE_00873 2.2e-222 mgtE P Acts as a magnesium transporter
JGIIAPLE_00876 4.4e-86 ykoJ S Peptidase propeptide and YPEB domain
JGIIAPLE_00877 1.1e-113 ykoI S Peptidase propeptide and YPEB domain
JGIIAPLE_00878 9.4e-245 ykoH 2.7.13.3 T Histidine kinase
JGIIAPLE_00879 2.4e-124 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_00880 7.9e-111 ykoF S YKOF-related Family
JGIIAPLE_00881 6.9e-99 ykoE S ABC-type cobalt transport system, permease component
JGIIAPLE_00882 4.6e-311 P ABC transporter, ATP-binding protein
JGIIAPLE_00883 1.8e-136 ykoC P Cobalt transport protein
JGIIAPLE_00884 6.3e-151 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
JGIIAPLE_00885 1.7e-176 isp O Belongs to the peptidase S8 family
JGIIAPLE_00886 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JGIIAPLE_00887 2.8e-87 guaD 3.5.4.12, 3.5.4.3, 3.5.4.33 FJ COG0590 Cytosine adenosine deaminases
JGIIAPLE_00889 8.4e-72 ohrB O Organic hydroperoxide resistance protein
JGIIAPLE_00890 3.9e-75 ohrR K COG1846 Transcriptional regulators
JGIIAPLE_00891 1.3e-70 ohrA O Organic hydroperoxide resistance protein
JGIIAPLE_00892 2.5e-228 proA 1.2.1.41, 1.2.1.81 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JGIIAPLE_00893 1e-201 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JGIIAPLE_00894 3.9e-170 purU 2.7.7.72, 3.5.1.10 F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
JGIIAPLE_00895 1.1e-50 ykkD P Multidrug resistance protein
JGIIAPLE_00896 3.5e-55 ykkC P Multidrug resistance protein
JGIIAPLE_00897 1e-98 ykkB 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
JGIIAPLE_00898 1e-98 ykkA S Protein of unknown function (DUF664)
JGIIAPLE_00899 5.4e-130 ykjA S Protein of unknown function (DUF421)
JGIIAPLE_00900 1e-07
JGIIAPLE_00901 1e-226 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
JGIIAPLE_00902 1.5e-92 ykhA 3.1.2.20 I Acyl-CoA hydrolase
JGIIAPLE_00903 5.3e-161 ykgA E Amidinotransferase
JGIIAPLE_00904 7.4e-205 pgl 3.1.1.31 G 6-phosphogluconolactonase
JGIIAPLE_00905 7.7e-188 ykfD E Belongs to the ABC transporter superfamily
JGIIAPLE_00906 5.3e-172 ykfC 3.4.14.13 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
JGIIAPLE_00907 3.2e-203 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
JGIIAPLE_00908 8.1e-179 ykfA 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
JGIIAPLE_00910 0.0 dppE E ABC transporter substrate-binding protein
JGIIAPLE_00911 3.4e-191 dppD P Belongs to the ABC transporter superfamily
JGIIAPLE_00912 3.9e-176 dppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
JGIIAPLE_00913 1.1e-159 dppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
JGIIAPLE_00914 7.9e-154 dppA E D-aminopeptidase
JGIIAPLE_00915 1e-137 proG 1.5.1.2 E Pyrroline-5-carboxylate reductase
JGIIAPLE_00916 8.5e-214 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JGIIAPLE_00918 1.3e-179 ykcC GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
JGIIAPLE_00919 0.0 ykcB M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JGIIAPLE_00921 7.2e-183 mhqA E COG0346 Lactoylglutathione lyase and related lyases
JGIIAPLE_00922 9.4e-242 steT E amino acid
JGIIAPLE_00923 6.9e-110 ykaA P COG1392 Phosphate transport regulator (distant homolog of PhoU)
JGIIAPLE_00924 5.8e-175 pit P phosphate transporter
JGIIAPLE_00925 1.8e-136 spoIISA S Toxin SpoIISA, type II toxin-antitoxin system
JGIIAPLE_00926 6.7e-23 spoIISB S Stage II sporulation protein SB
JGIIAPLE_00927 1.2e-163 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
JGIIAPLE_00928 9.3e-40 xhlB S SPP1 phage holin
JGIIAPLE_00929 2.8e-39 xhlA S Haemolysin XhlA
JGIIAPLE_00930 1.2e-154 xepA
JGIIAPLE_00931 1.7e-23 xkdX
JGIIAPLE_00932 2.6e-55 xkdW S XkdW protein
JGIIAPLE_00933 0.0
JGIIAPLE_00934 6.7e-41
JGIIAPLE_00935 4e-104 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
JGIIAPLE_00936 6e-191 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
JGIIAPLE_00937 9.6e-71 xkdS S Protein of unknown function (DUF2634)
JGIIAPLE_00938 2.1e-39 xkdR S Protein of unknown function (DUF2577)
JGIIAPLE_00939 4.8e-182 yqbQ 3.2.1.96 G NLP P60 protein
JGIIAPLE_00940 3.7e-122 xkdP S Lysin motif
JGIIAPLE_00941 0.0 xkdO L Transglycosylase SLT domain
JGIIAPLE_00942 1.9e-77 S Phage XkdN-like tail assembly chaperone protein, TAC
JGIIAPLE_00943 6.1e-76 xkdM S Phage tail tube protein
JGIIAPLE_00944 2.5e-256 xkdK S Phage tail sheath C-terminal domain
JGIIAPLE_00945 1.9e-77 xkdJ
JGIIAPLE_00946 4.4e-88 xkdI S Bacteriophage HK97-gp10, putative tail-component
JGIIAPLE_00947 8.7e-65 yqbH S Domain of unknown function (DUF3599)
JGIIAPLE_00948 5.5e-65 yqbG S Protein of unknown function (DUF3199)
JGIIAPLE_00949 5.8e-169 xkdG S Phage capsid family
JGIIAPLE_00950 1.2e-133 yqbD 2.1.1.72 L Putative phage serine protease XkdF
JGIIAPLE_00951 5.4e-286 yqbA S portal protein
JGIIAPLE_00952 9.6e-255 xtmB S phage terminase, large subunit
JGIIAPLE_00953 4.8e-140 xtmA L phage terminase small subunit
JGIIAPLE_00954 4.4e-86 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
JGIIAPLE_00955 4.6e-10 yqaO S Phage-like element PBSX protein XtrA
JGIIAPLE_00958 6.4e-119 xkdC L Bacterial dnaA protein
JGIIAPLE_00959 5.9e-157 xkdB K sequence-specific DNA binding
JGIIAPLE_00961 3.2e-56 xre K Helix-turn-helix XRE-family like proteins
JGIIAPLE_00962 1.6e-111 xkdA E IrrE N-terminal-like domain
JGIIAPLE_00963 4.4e-160 ydbD P Catalase
JGIIAPLE_00964 4.2e-112 yjqB S Pfam:DUF867
JGIIAPLE_00965 2.1e-61 yjqA S Bacterial PH domain
JGIIAPLE_00966 9.1e-170 xlyA 3.5.1.28 CBM50 M N-acetylmuramoyl-L-alanine amidase
JGIIAPLE_00967 6.3e-41 S YCII-related domain
JGIIAPLE_00969 2.1e-213 S response regulator aspartate phosphatase
JGIIAPLE_00970 9.4e-247 ftsH2 3.4.21.53 O AAA domain (dynein-related subfamily)
JGIIAPLE_00971 3.3e-80 yjoA S DinB family
JGIIAPLE_00972 4.3e-130 MA20_18170 S membrane transporter protein
JGIIAPLE_00973 2e-288 uxaA 4.2.1.7, 4.4.1.24 G Altronate
JGIIAPLE_00974 2.1e-287 uxaB 1.1.1.17, 1.1.1.58 G tagaturonate reductase activity
JGIIAPLE_00975 2.3e-184 exuR K transcriptional
JGIIAPLE_00976 3.7e-227 exuT G Sugar (and other) transporter
JGIIAPLE_00977 2.3e-153 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_00978 4.7e-215 uxuA 4.2.1.8 G Catalyzes the dehydration of D-mannonate
JGIIAPLE_00979 1.6e-193 rspB 1.1.1.380 E Alcohol dehydrogenase GroES-like domain
JGIIAPLE_00980 3e-195 yjmC 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
JGIIAPLE_00981 5.8e-250 yjmB G symporter YjmB
JGIIAPLE_00982 6.3e-284 uxaC 5.3.1.12 G glucuronate isomerase
JGIIAPLE_00983 2.6e-219 yjlD 1.6.99.3 C NADH dehydrogenase
JGIIAPLE_00984 7.1e-66 yjlC S Protein of unknown function (DUF1641)
JGIIAPLE_00985 2.8e-93 yjlB S Cupin domain
JGIIAPLE_00986 1.8e-176 yjlA EG Putative multidrug resistance efflux transporter
JGIIAPLE_00987 5.2e-136 pstB 3.6.3.27 P ATPases associated with a variety of cellular activities
JGIIAPLE_00988 1.9e-122 ybbM S transport system, permease component
JGIIAPLE_00989 1.2e-146 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
JGIIAPLE_00990 8.2e-30
JGIIAPLE_00991 4.5e-219 oleD GT1 CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
JGIIAPLE_00992 3.8e-226 yjiB 1.14.13.154, 1.14.15.8 C Cytochrome P450
JGIIAPLE_00994 2e-117 yjhB 3.6.1.13, 3.6.1.55 F ADP-ribose pyrophosphatase
JGIIAPLE_00995 8.7e-07 S Domain of unknown function (DUF4352)
JGIIAPLE_00996 4.3e-95 yjgD S Protein of unknown function (DUF1641)
JGIIAPLE_00997 0.0 yjgC 1.17.1.10, 1.17.1.9 C formate dehydrogenase (NAD+) activity
JGIIAPLE_00998 8.9e-104 yjgB S Domain of unknown function (DUF4309)
JGIIAPLE_00999 1.2e-45 T PhoQ Sensor
JGIIAPLE_01000 1.6e-171 yjfC O Predicted Zn-dependent protease (DUF2268)
JGIIAPLE_01001 3.6e-21 yjfB S Putative motility protein
JGIIAPLE_01002 5.5e-83 S Protein of unknown function (DUF2690)
JGIIAPLE_01003 4.9e-265 xynD 3.5.1.104 G Polysaccharide deacetylase
JGIIAPLE_01005 3.3e-175 cyoE 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
JGIIAPLE_01006 2.7e-52 yjdJ S Domain of unknown function (DUF4306)
JGIIAPLE_01007 4.2e-29 S Domain of unknown function (DUF4177)
JGIIAPLE_01008 8e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JGIIAPLE_01010 2.5e-94 yjdG 2.3.1.128 J Acetyltransferase (GNAT) domain
JGIIAPLE_01011 4.8e-51 yjdF S Protein of unknown function (DUF2992)
JGIIAPLE_01012 6.7e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
JGIIAPLE_01013 0.0 manP 2.7.1.191, 2.7.1.202 G phosphotransferase system
JGIIAPLE_01014 0.0 manR 2.7.1.200, 2.7.1.202 GKT transcriptional antiterminator
JGIIAPLE_01016 2.4e-141 IQ Enoyl-(Acyl carrier protein) reductase
JGIIAPLE_01017 2.2e-47 yjcS S Antibiotic biosynthesis monooxygenase
JGIIAPLE_01018 1.1e-92 yqaS L DNA packaging
JGIIAPLE_01019 4.1e-49 S YjcQ protein
JGIIAPLE_01020 1.6e-72 yjcP
JGIIAPLE_01021 8.5e-81 L Transposase
JGIIAPLE_01024 2.6e-44 yjcN
JGIIAPLE_01025 2.1e-190 S Putative amidase domain
JGIIAPLE_01028 1.1e-212 yjcL S Protein of unknown function (DUF819)
JGIIAPLE_01029 3.7e-99 rimJ 2.3.1.128 J Alanine acetyltransferase
JGIIAPLE_01030 2.9e-218 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
JGIIAPLE_01031 3.8e-215 metB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
JGIIAPLE_01032 1.8e-138 yjcH P COG2382 Enterochelin esterase and related enzymes
JGIIAPLE_01033 2.9e-93 yjcG J Belongs to the 2H phosphoesterase superfamily. YjcG family
JGIIAPLE_01034 3e-72 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JGIIAPLE_01035 1.7e-38
JGIIAPLE_01036 0.0 yjcD 3.6.4.12 L DNA helicase
JGIIAPLE_01037 2.9e-38 spoVIF S Stage VI sporulation protein F
JGIIAPLE_01040 8.7e-57 yjcA S Protein of unknown function (DUF1360)
JGIIAPLE_01041 2.3e-55 cotV S Spore Coat Protein X and V domain
JGIIAPLE_01042 3e-32 cotW
JGIIAPLE_01043 6.4e-77 cotX S Spore Coat Protein X and V domain
JGIIAPLE_01044 3.4e-96 cotY S Spore coat protein Z
JGIIAPLE_01045 5.2e-83 cotZ S Spore coat protein
JGIIAPLE_01046 5.9e-54 yjbX S Spore coat protein
JGIIAPLE_01047 3.2e-141 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
JGIIAPLE_01048 5.3e-150 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
JGIIAPLE_01049 6e-188 thiF 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
JGIIAPLE_01050 1.5e-135 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
JGIIAPLE_01051 3e-30 thiS H thiamine diphosphate biosynthetic process
JGIIAPLE_01052 7.2e-219 thiO 1.4.3.19 E Glycine oxidase
JGIIAPLE_01053 3.8e-108 tenI 2.5.1.3, 5.3.99.10 H Transcriptional regulator TenI
JGIIAPLE_01054 3.4e-137 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JGIIAPLE_01055 0.0 yjbQ P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
JGIIAPLE_01056 3e-128 prpE 3.1.3.16, 3.6.1.41 T Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
JGIIAPLE_01057 9.5e-161 yjbO 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JGIIAPLE_01058 2.1e-151 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JGIIAPLE_01059 2.6e-112 yjbM 2.7.6.5 S GTP pyrophosphokinase
JGIIAPLE_01060 7.1e-62 yjbL S Belongs to the UPF0738 family
JGIIAPLE_01061 2.4e-101 yjbK S protein conserved in bacteria
JGIIAPLE_01062 1.5e-87 yjbJ M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
JGIIAPLE_01063 3.7e-72 yjbI S Bacterial-like globin
JGIIAPLE_01064 3.3e-169 yjbH Q dithiol-disulfide isomerase involved in polyketide biosynthesis
JGIIAPLE_01066 1.8e-20
JGIIAPLE_01067 0.0 pepF E oligoendopeptidase F
JGIIAPLE_01068 2.3e-223 yjbF S Competence protein
JGIIAPLE_01069 2.3e-116 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
JGIIAPLE_01070 6e-112 yjbE P Integral membrane protein TerC family
JGIIAPLE_01071 2.1e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JGIIAPLE_01072 6.9e-104 yjbC K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JGIIAPLE_01073 8.6e-196 yjbB EGP Major Facilitator Superfamily
JGIIAPLE_01074 5.5e-172 oppF E Belongs to the ABC transporter superfamily
JGIIAPLE_01075 3e-198 oppD P Belongs to the ABC transporter superfamily
JGIIAPLE_01076 7.7e-166 oppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
JGIIAPLE_01077 2.7e-166 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
JGIIAPLE_01078 0.0 oppA E ABC transporter substrate-binding protein
JGIIAPLE_01079 6.1e-185 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
JGIIAPLE_01080 5e-147 yjbA S Belongs to the UPF0736 family
JGIIAPLE_01081 7.9e-163 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
JGIIAPLE_01082 1.3e-171 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
JGIIAPLE_01083 1.6e-251 appA E COG0747 ABC-type dipeptide transport system, periplasmic component
JGIIAPLE_01084 6.5e-187 appF E Belongs to the ABC transporter superfamily
JGIIAPLE_01085 1.8e-184 appD P Belongs to the ABC transporter superfamily
JGIIAPLE_01086 7.8e-151 yjaZ O Zn-dependent protease
JGIIAPLE_01087 1.8e-234 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
JGIIAPLE_01088 3.9e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JGIIAPLE_01089 2.7e-22 yjzB
JGIIAPLE_01090 7.3e-26 comZ S ComZ
JGIIAPLE_01091 1.1e-183 med S Transcriptional activator protein med
JGIIAPLE_01092 7.3e-103 yjaV
JGIIAPLE_01093 6.2e-142 yjaU I carboxylic ester hydrolase activity
JGIIAPLE_01094 2.3e-16 yjzD S Protein of unknown function (DUF2929)
JGIIAPLE_01095 9.5e-28 yjzC S YjzC-like protein
JGIIAPLE_01096 3.8e-176 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JGIIAPLE_01097 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase ammonia chain
JGIIAPLE_01098 3.9e-206 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
JGIIAPLE_01099 4.4e-219 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
JGIIAPLE_01100 2.2e-137 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
JGIIAPLE_01101 3.1e-231 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JGIIAPLE_01102 5.4e-200 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JGIIAPLE_01103 1.7e-88 norB G Major Facilitator Superfamily
JGIIAPLE_01104 4.3e-272 yitY C D-arabinono-1,4-lactone oxidase
JGIIAPLE_01105 1.5e-22 pilT S Proteolipid membrane potential modulator
JGIIAPLE_01106 4.7e-51 yitW S metal-sulfur cluster biosynthetic enzyme
JGIIAPLE_01107 4.5e-143 yjfP S COG1073 Hydrolases of the alpha beta superfamily
JGIIAPLE_01108 1.9e-155 yitU 3.1.3.104 S hydrolases of the HAD superfamily
JGIIAPLE_01110 1.2e-17 S Protein of unknown function (DUF3813)
JGIIAPLE_01111 1.9e-72 ipi S Intracellular proteinase inhibitor
JGIIAPLE_01112 6.6e-148 yitT S Uncharacterized protein conserved in bacteria (DUF2179)
JGIIAPLE_01113 8.4e-159 yitS S protein conserved in bacteria
JGIIAPLE_01114 2.2e-311 nprB 3.4.24.28 E Peptidase M4
JGIIAPLE_01115 1.4e-44 yitR S Domain of unknown function (DUF3784)
JGIIAPLE_01116 2e-95
JGIIAPLE_01117 1.5e-58 K Transcriptional regulator PadR-like family
JGIIAPLE_01118 1.5e-97 S Sporulation delaying protein SdpA
JGIIAPLE_01119 2.8e-171
JGIIAPLE_01120 8.5e-94
JGIIAPLE_01121 4e-161 cvfB S protein conserved in bacteria
JGIIAPLE_01122 8.6e-55 yajQ S Belongs to the UPF0234 family
JGIIAPLE_01123 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
JGIIAPLE_01124 2e-82 yjcF S Acetyltransferase (GNAT) domain
JGIIAPLE_01125 1.8e-161 yitH K Acetyltransferase (GNAT) domain
JGIIAPLE_01126 4e-229 yitG EGP Major facilitator Superfamily
JGIIAPLE_01127 5.4e-222 yitF 5.5.1.27 M Belongs to the mandelate racemase muconate lactonizing enzyme family
JGIIAPLE_01128 7.2e-113 yitE S Uncharacterised 5xTM membrane BCR, YitT family COG1284
JGIIAPLE_01129 1.9e-141 yitD 4.4.1.19 S synthase
JGIIAPLE_01130 4.9e-125 comB 3.1.3.71 H Belongs to the ComB family
JGIIAPLE_01131 9.2e-143 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
JGIIAPLE_01132 3.2e-233 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
JGIIAPLE_01133 4.9e-113 cysC 1.8.4.10, 1.8.4.8, 2.7.1.25, 2.7.7.4 P Catalyzes the synthesis of activated sulfate
JGIIAPLE_01134 3.1e-155 yisY I hydrolases or acyltransferases (alpha beta hydrolase superfamily)
JGIIAPLE_01135 4e-36 mcbG S Pentapeptide repeats (9 copies)
JGIIAPLE_01136 1.7e-281 yisV K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
JGIIAPLE_01137 6.4e-108 argO S Lysine exporter protein LysE YggA
JGIIAPLE_01138 1.3e-93 yisT S DinB family
JGIIAPLE_01139 4.5e-199 yisS 1.1.1.370 S Oxidoreductase family, C-terminal alpha/beta domain
JGIIAPLE_01140 2.4e-184 purR K helix_turn _helix lactose operon repressor
JGIIAPLE_01141 1.2e-160 yisR K Transcriptional regulator
JGIIAPLE_01142 4e-243 yisQ V Mate efflux family protein
JGIIAPLE_01143 6.8e-150 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I phytoene
JGIIAPLE_01144 2.1e-88 yizA S Damage-inducible protein DinB
JGIIAPLE_01145 0.0 asnO 6.3.5.4 E Asparagine synthase
JGIIAPLE_01146 7.2e-106 yisN S Protein of unknown function (DUF2777)
JGIIAPLE_01147 0.0 wprA O Belongs to the peptidase S8 family
JGIIAPLE_01148 3e-57 yisL S UPF0344 protein
JGIIAPLE_01149 3.2e-172 yisK Q COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
JGIIAPLE_01150 1.7e-176 cotH M Spore Coat
JGIIAPLE_01151 1.5e-22 yisI S Spo0E like sporulation regulatory protein
JGIIAPLE_01152 1.9e-33 gerPA S Spore germination protein
JGIIAPLE_01153 4e-34 gerPB S cell differentiation
JGIIAPLE_01154 1.8e-54 gerPC S Spore germination protein
JGIIAPLE_01155 6.3e-24 gerPD S Spore germination protein
JGIIAPLE_01156 3e-66 gerPE S Spore germination protein GerPE
JGIIAPLE_01157 4.5e-32 gerPF S Spore germination protein gerPA/gerPF
JGIIAPLE_01158 6e-51 yisB V COG1403 Restriction endonuclease
JGIIAPLE_01159 0.0 sbcC L COG0419 ATPase involved in DNA repair
JGIIAPLE_01160 1.7e-221 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
JGIIAPLE_01161 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
JGIIAPLE_01162 0.0 addB 3.1.21.3, 3.6.4.12 L ATP-dependent helicase deoxyribonuclease subunit B
JGIIAPLE_01163 2.2e-78 yhjR S Rubrerythrin
JGIIAPLE_01164 2e-36 yhjQ C COG1145 Ferredoxin
JGIIAPLE_01165 0.0 S Sugar transport-related sRNA regulator N-term
JGIIAPLE_01166 3.1e-215 EGP Transmembrane secretion effector
JGIIAPLE_01167 3.8e-202 abrB S membrane
JGIIAPLE_01168 7e-189 yhjM 5.1.1.1 K Transcriptional regulator
JGIIAPLE_01169 4.4e-255 ntdA 2.6.1.104 E Belongs to the DegT DnrJ EryC1 family
JGIIAPLE_01170 1.8e-161 ntdB 3.1.3.92 S Sucrose-6F-phosphate phosphohydrolase
JGIIAPLE_01171 1.1e-200 thuB 1.1.1.361 S Oxidoreductase family, C-terminal alpha/beta domain
JGIIAPLE_01172 6.9e-215 glcP G Major Facilitator Superfamily
JGIIAPLE_01173 1.2e-94 yhjH K helix_turn_helix multiple antibiotic resistance protein
JGIIAPLE_01174 1.1e-286 yhjG CH FAD binding domain
JGIIAPLE_01175 1.2e-91 sipV 3.4.21.89 U Belongs to the peptidase S26 family
JGIIAPLE_01176 9.1e-110 yhjE S SNARE associated Golgi protein
JGIIAPLE_01177 5e-60 yhjD
JGIIAPLE_01178 6.9e-27 yhjC S Protein of unknown function (DUF3311)
JGIIAPLE_01179 6.1e-266 yhjB E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JGIIAPLE_01180 7.8e-42 yhjA S Excalibur calcium-binding domain
JGIIAPLE_01181 2.1e-168 IQ Enoyl-(Acyl carrier protein) reductase
JGIIAPLE_01182 4.2e-109 comK K Competence transcription factor
JGIIAPLE_01183 1.3e-32 yhzC S IDEAL
JGIIAPLE_01184 1.6e-157 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_01185 1.1e-302 yhfW CE COG0665 Glycine D-amino acid oxidases (deaminating)
JGIIAPLE_01186 1.7e-182 hemAT NT chemotaxis protein
JGIIAPLE_01187 5e-91 bioY S BioY family
JGIIAPLE_01188 1e-281 yhfT 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
JGIIAPLE_01189 2.3e-201 vraB 2.3.1.9 I Belongs to the thiolase family
JGIIAPLE_01190 1.9e-109 yhfR 3.1.3.73 G Belongs to the phosphoglycerate mutase family
JGIIAPLE_01191 4.3e-159 yfmC M Periplasmic binding protein
JGIIAPLE_01192 8.3e-182 yhfP 1.1.1.1 C Quinone oxidoreductase
JGIIAPLE_01193 9.2e-80 VY92_01935 K acetyltransferase
JGIIAPLE_01194 2.3e-204 aprE 3.4.21.62 O Belongs to the peptidase S8 family
JGIIAPLE_01195 5.4e-242 yhfN 3.4.24.84 O Peptidase M48
JGIIAPLE_01196 1.9e-65 yhfM
JGIIAPLE_01197 7.3e-302 fadD 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
JGIIAPLE_01198 2.6e-112 yhfK GM NmrA-like family
JGIIAPLE_01199 2e-191 lplJ 6.3.1.20 H Lipoate-protein ligase
JGIIAPLE_01200 1.8e-141 yhfI S COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
JGIIAPLE_01201 3.8e-227 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
JGIIAPLE_01202 1.7e-72 3.4.13.21 S ASCH
JGIIAPLE_01203 1.6e-199 yhfE 3.2.1.4 GH5,GH9 G peptidase M42
JGIIAPLE_01204 9.8e-138 yhfC S Putative membrane peptidase family (DUF2324)
JGIIAPLE_01205 3e-184 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JGIIAPLE_01206 1e-238 yhgE S YhgE Pip N-terminal domain protein
JGIIAPLE_01207 1.4e-101 yhgD K Transcriptional regulator
JGIIAPLE_01208 1.7e-268 hemG 1.14.19.9, 1.3.3.15, 1.3.3.4 H Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JGIIAPLE_01209 7.3e-180 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
JGIIAPLE_01210 1.7e-204 hemE 4.1.1.37 H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JGIIAPLE_01211 0.0 pbpF 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JGIIAPLE_01212 1.3e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
JGIIAPLE_01213 7.5e-17 1.15.1.2 C Rubrerythrin
JGIIAPLE_01214 4.2e-248 yhfA C membrane
JGIIAPLE_01215 2.3e-231 yhaA 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
JGIIAPLE_01216 4.8e-115 ecsC S EcsC protein family
JGIIAPLE_01217 1.8e-215 ecsB U ABC transporter
JGIIAPLE_01218 4.6e-137 ecsA V transporter (ATP-binding protein)
JGIIAPLE_01219 4.7e-81 hit FG COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
JGIIAPLE_01220 9.9e-205 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JGIIAPLE_01221 3.6e-80 trpP S Tryptophan transporter TrpP
JGIIAPLE_01222 7e-39 yhaH S YtxH-like protein
JGIIAPLE_01223 1e-113 hpr K Negative regulator of protease production and sporulation
JGIIAPLE_01224 1.3e-54 yhaI S Protein of unknown function (DUF1878)
JGIIAPLE_01225 8.7e-90 yhaK S Putative zincin peptidase
JGIIAPLE_01226 1.9e-121 prsA 5.2.1.8 M plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
JGIIAPLE_01227 1.6e-21 yhaL S Sporulation protein YhaL
JGIIAPLE_01228 1.5e-177 yhaM L Shows a 3'-5' exoribonuclease activity
JGIIAPLE_01229 0.0 yhaN L AAA domain
JGIIAPLE_01230 3.6e-227 yhaO L DNA repair exonuclease
JGIIAPLE_01231 4.2e-215 yhaP CP COG1668 ABC-type Na efflux pump, permease component
JGIIAPLE_01232 1.8e-167 yhaQ S ABC transporter, ATP-binding protein
JGIIAPLE_01233 1.1e-26 S YhzD-like protein
JGIIAPLE_01234 1.9e-133 yhaR 5.3.3.18 I enoyl-CoA hydratase
JGIIAPLE_01236 7.8e-88 yhaT P regulatory, ligand-binding protein related to C-terminal domains of K channels
JGIIAPLE_01237 1.7e-208 yhaU P COG0475 Kef-type K transport systems, membrane components
JGIIAPLE_01238 7.1e-294 hemZ H coproporphyrinogen III oxidase
JGIIAPLE_01239 4.3e-142 yhaX S haloacid dehalogenase-like hydrolase
JGIIAPLE_01240 3.1e-206 yhaZ L DNA alkylation repair enzyme
JGIIAPLE_01241 9.5e-48 yheA S Belongs to the UPF0342 family
JGIIAPLE_01242 6.7e-204 yheB S Belongs to the UPF0754 family
JGIIAPLE_01243 4.3e-216 yheC HJ YheC/D like ATP-grasp
JGIIAPLE_01244 1.6e-268 gshB 6.3.2.2, 6.3.2.3 HJ YheC/D like ATP-grasp
JGIIAPLE_01245 1.3e-36 yheE S Family of unknown function (DUF5342)
JGIIAPLE_01246 6.3e-28 sspB S spore protein
JGIIAPLE_01247 3.7e-111 yheG GM NAD(P)H-binding
JGIIAPLE_01248 0.0 yheH V COG1132 ABC-type multidrug transport system, ATPase and permease components
JGIIAPLE_01249 0.0 yheI V COG1132 ABC-type multidrug transport system, ATPase and permease components
JGIIAPLE_01250 3.4e-84 nhaX T Belongs to the universal stress protein A family
JGIIAPLE_01251 2.2e-233 nhaC C Na H antiporter
JGIIAPLE_01252 1.1e-153 dat 2.6.1.21 E Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
JGIIAPLE_01253 1.7e-151 yheN G deacetylase
JGIIAPLE_01254 1.2e-140 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
JGIIAPLE_01255 6.6e-204 yhdY M Mechanosensitive ion channel
JGIIAPLE_01257 3.3e-135 yhdW 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
JGIIAPLE_01258 5.1e-66 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JGIIAPLE_01259 2.8e-47 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JGIIAPLE_01260 1.1e-240 corC1 P COG1253 Hemolysins and related proteins containing CBS domains
JGIIAPLE_01261 1.4e-223 yhdR 2.6.1.1 E Aminotransferase
JGIIAPLE_01262 4.1e-74 cueR K transcriptional
JGIIAPLE_01263 3.1e-240 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
JGIIAPLE_01264 3e-110 plsC 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
JGIIAPLE_01265 1.5e-191 yhdN C Aldo keto reductase
JGIIAPLE_01266 5.5e-86 sigM K Belongs to the sigma-70 factor family. ECF subfamily
JGIIAPLE_01267 6.6e-201 yhdL S Sigma factor regulator N-terminal
JGIIAPLE_01268 8.1e-45 yhdK S Sigma-M inhibitor protein
JGIIAPLE_01269 6.9e-77 BH1582 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JGIIAPLE_01270 3.7e-276 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
JGIIAPLE_01271 1.5e-242 yhdH S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
JGIIAPLE_01272 3.4e-250 yhdG E amino acid
JGIIAPLE_01273 4.9e-162 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_01274 1.4e-206 citA 2.3.3.1 C Belongs to the citrate synthase family
JGIIAPLE_01275 3.8e-162 citR K Transcriptional regulator
JGIIAPLE_01276 2.5e-141 lytE 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
JGIIAPLE_01277 5.8e-258 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
JGIIAPLE_01278 2.1e-276 ycgB S Stage V sporulation protein R
JGIIAPLE_01279 8.7e-239 ygxB M Conserved TM helix
JGIIAPLE_01280 3.5e-76 nsrR K Transcriptional regulator
JGIIAPLE_01281 7.9e-189 cwlS 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
JGIIAPLE_01282 4.8e-54 yhdC S Protein of unknown function (DUF3889)
JGIIAPLE_01283 1.2e-38 yhdB S YhdB-like protein
JGIIAPLE_01284 1.4e-84 azr 1.7.1.6 S NADPH-dependent FMN reductase
JGIIAPLE_01285 1.1e-113 yhcZ K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JGIIAPLE_01286 5.5e-214 yhcY 2.7.13.3 T Histidine kinase
JGIIAPLE_01287 0.0 pmmB 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
JGIIAPLE_01288 0.0 glpD 1.1.5.3 C Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JGIIAPLE_01289 4.6e-293 glpK 2.7.1.30 C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JGIIAPLE_01290 1.9e-152 glpF G Belongs to the MIP aquaporin (TC 1.A.8) family
JGIIAPLE_01291 5.2e-104 glpP K Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
JGIIAPLE_01292 1.1e-261 yhxA E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JGIIAPLE_01293 2.7e-304 yhcX 3.5.1.3 K Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
JGIIAPLE_01294 4.6e-120 yhcW 5.4.2.6 S hydrolase
JGIIAPLE_01295 9.9e-68 yhcV S COG0517 FOG CBS domain
JGIIAPLE_01296 9.3e-68 yhcU S Family of unknown function (DUF5365)
JGIIAPLE_01297 7.9e-171 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JGIIAPLE_01298 7.6e-106 yhcS 3.4.22.70 M COG3764 Sortase (surface protein transpeptidase)
JGIIAPLE_01299 0.0 yhcR 3.1.3.5, 3.1.31.1 F Belongs to the 5'-nucleotidase family
JGIIAPLE_01300 5.2e-100 yhcQ M Spore coat protein
JGIIAPLE_01301 2.5e-167 yhcP
JGIIAPLE_01302 2.1e-68 yhcN S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
JGIIAPLE_01303 3.7e-44 yhcM
JGIIAPLE_01304 6.3e-220 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
JGIIAPLE_01305 1.2e-197 yhcK 2.7.7.65 T COG2199 FOG GGDEF domain
JGIIAPLE_01306 5.2e-153 metQ M Belongs to the nlpA lipoprotein family
JGIIAPLE_01307 1e-30 cspB K Cold-shock protein
JGIIAPLE_01308 3.9e-165 yhcI S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
JGIIAPLE_01309 2.6e-166 yhcH V ABC transporter, ATP-binding protein
JGIIAPLE_01310 1.6e-123 yhcG V ABC transporter, ATP-binding protein
JGIIAPLE_01311 6.6e-60 yhcF K Transcriptional regulator
JGIIAPLE_01312 7.8e-55
JGIIAPLE_01314 2.8e-37 yhcC
JGIIAPLE_01315 1e-98 yhcB 1.6.5.2 S Belongs to the WrbA family
JGIIAPLE_01316 3.1e-271 yhcA EGP Major facilitator Superfamily
JGIIAPLE_01317 3.1e-97 yhbJ V COG1566 Multidrug resistance efflux pump
JGIIAPLE_01318 2.2e-76 yhbI K DNA-binding transcription factor activity
JGIIAPLE_01319 2.5e-225 yhbH S Belongs to the UPF0229 family
JGIIAPLE_01320 0.0 prkA T Ser protein kinase
JGIIAPLE_01321 8.2e-75 yhbF M COG1664 Integral membrane protein CcmA involved in cell shape determination
JGIIAPLE_01322 1.6e-65 yhbE M COG1664 Integral membrane protein CcmA involved in cell shape determination
JGIIAPLE_01323 1.2e-109 yhbD K Protein of unknown function (DUF4004)
JGIIAPLE_01324 8.2e-87 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JGIIAPLE_01325 4.4e-177 yhbB S Putative amidase domain
JGIIAPLE_01326 2.1e-224 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JGIIAPLE_01327 7.9e-114 yhzB S B3/4 domain
JGIIAPLE_01329 4.4e-29 K Transcriptional regulator
JGIIAPLE_01330 4.1e-78 ygaO
JGIIAPLE_01331 6e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JGIIAPLE_01333 3.1e-217 ssuD 1.14.14.5 C Catalyzes the desulfonation of aliphatic sulfonates
JGIIAPLE_01334 1.5e-147 ssuC P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
JGIIAPLE_01335 1.7e-171 ssuA M Sulfonate ABC transporter
JGIIAPLE_01336 1.1e-145 ssuB P COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
JGIIAPLE_01337 3.2e-291 katA 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
JGIIAPLE_01339 1.9e-266 ygaK C Berberine and berberine like
JGIIAPLE_01340 0.0 thiC 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JGIIAPLE_01341 5.9e-134 pepE 3.4.11.2, 3.4.13.21 E Belongs to the peptidase S51 family
JGIIAPLE_01342 3e-27
JGIIAPLE_01343 2.7e-143 spo0M S COG4326 Sporulation control protein
JGIIAPLE_01347 2e-08
JGIIAPLE_01355 7.8e-08
JGIIAPLE_01364 1.1e-11 T PhoQ Sensor
JGIIAPLE_01368 6.1e-08 yheG GM NAD(P)H-binding
JGIIAPLE_01376 1.2e-07 fadB 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
JGIIAPLE_01378 2e-13 ybeC E amino acid
JGIIAPLE_01389 1.2e-08 oppA E ABC transporter substrate-binding protein
JGIIAPLE_01391 2.6e-17 serA 1.1.1.399, 1.1.1.95 E Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JGIIAPLE_01392 1.1e-12
JGIIAPLE_01395 2.4e-07 yclK 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
JGIIAPLE_01400 1.5e-11 yxjG 2.1.1.14 E Methionine synthase
JGIIAPLE_01404 1.5e-19 rhiB IQ polyketide synthase
JGIIAPLE_01412 2.6e-21 purD 6.3.4.13 F Belongs to the GARS family
JGIIAPLE_01422 1.1e-12 ytzE K DNA-binding transcription factor activity
JGIIAPLE_01423 1.4e-13 yisQ V Mate efflux family protein
JGIIAPLE_01426 1.6e-11 srfAB Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_01427 2.4e-15 ymcA 3.6.3.21 S Belongs to the UPF0342 family
JGIIAPLE_01432 2.2e-07 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JGIIAPLE_01433 2.5e-07 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JGIIAPLE_01434 5.6e-15 yufQ S Belongs to the binding-protein-dependent transport system permease family
JGIIAPLE_01438 9.5e-24 yjbC K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JGIIAPLE_01441 1.2e-07 ykuO
JGIIAPLE_01449 2.1e-10 bdbC O Required for disulfide bond formation in some proteins
JGIIAPLE_01457 3.2e-09 yvsH E Arginine ornithine antiporter
JGIIAPLE_01459 6.5e-11 ylbB T COG0517 FOG CBS domain
JGIIAPLE_01460 4.3e-90 thiT S Thiamine transporter protein (Thia_YuaJ)
JGIIAPLE_01461 3.4e-94 M1-753 M FR47-like protein
JGIIAPLE_01462 4.1e-188 yuaG 3.4.21.72 S protein conserved in bacteria
JGIIAPLE_01463 1.4e-77 yuaF OU Membrane protein implicated in regulation of membrane protease activity
JGIIAPLE_01464 3.9e-84 yuaE S DinB superfamily
JGIIAPLE_01465 7.9e-108 yuaD
JGIIAPLE_01466 2.9e-229 gbsB 1.1.1.1 C alcohol dehydrogenase
JGIIAPLE_01467 8e-282 gbsA 1.2.1.8 C Belongs to the aldehyde dehydrogenase family
JGIIAPLE_01468 1.1e-95 yuaC K Belongs to the GbsR family
JGIIAPLE_01469 2.2e-91 yuaB
JGIIAPLE_01470 5e-122 ktrA P COG0569 K transport systems, NAD-binding component
JGIIAPLE_01471 5.4e-237 ktrB P Potassium
JGIIAPLE_01472 1e-38 yiaA S yiaA/B two helix domain
JGIIAPLE_01473 6.4e-153 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JGIIAPLE_01474 6.2e-277 yubD P Major Facilitator Superfamily
JGIIAPLE_01475 2.6e-88 cdoA 1.13.11.20 S Cysteine dioxygenase type I
JGIIAPLE_01477 1.2e-133 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
JGIIAPLE_01478 6.3e-197 yubA S transporter activity
JGIIAPLE_01479 3.3e-183 ygjR S Oxidoreductase
JGIIAPLE_01480 1.4e-253 rhaA 2.7.1.5, 5.3.1.14 G Belongs to the rhamnose isomerase family
JGIIAPLE_01481 2.5e-55 rhaM 5.1.3.32 G Involved in the anomeric conversion of L-rhamnose
JGIIAPLE_01482 1.3e-281 rhaB 2.7.1.12, 2.7.1.17, 2.7.1.5, 5.3.1.14 G Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
JGIIAPLE_01483 1e-134 fucR K COG1349 Transcriptional regulators of sugar metabolism
JGIIAPLE_01484 0.0 rhaD 1.1.1.1, 4.1.2.19 IQ Class II Aldolase and Adducin N-terminal domain
JGIIAPLE_01485 5.1e-239 mcpA NT chemotaxis protein
JGIIAPLE_01486 2.2e-295 mcpA NT chemotaxis protein
JGIIAPLE_01487 1.5e-222 mcpA NT chemotaxis protein
JGIIAPLE_01488 3.2e-225 mcpA NT chemotaxis protein
JGIIAPLE_01489 2.6e-140 tgl 2.3.2.13 S protein-glutamine gamma-glutamyltransferase activity
JGIIAPLE_01490 1e-35
JGIIAPLE_01491 2.1e-72 yugU S Uncharacterised protein family UPF0047
JGIIAPLE_01492 0.0 yugT 3.2.1.10, 3.2.1.20 GH13,GH31 G COG0366 Glycosidases
JGIIAPLE_01493 2.6e-236 yugS S COG1253 Hemolysins and related proteins containing CBS domains
JGIIAPLE_01494 1.4e-116 yugP S Zn-dependent protease
JGIIAPLE_01495 4.6e-39
JGIIAPLE_01496 1.1e-53 mstX S Membrane-integrating protein Mistic
JGIIAPLE_01497 1.7e-182 yugO P COG1226 Kef-type K transport systems
JGIIAPLE_01498 1.3e-72 yugN S YugN-like family
JGIIAPLE_01500 4.2e-261 pgi 5.3.1.9 G Belongs to the GPI family
JGIIAPLE_01501 2.8e-229 yugK C Dehydrogenase
JGIIAPLE_01502 8.9e-228 yugJ C oxidoreductases, Fe-dependent alcohol dehydrogenase family
JGIIAPLE_01503 1.1e-34 yuzA S Domain of unknown function (DUF378)
JGIIAPLE_01504 8.9e-63 yugI 5.3.1.9 J RNA binding protein (contains ribosomal protein S1 domain)
JGIIAPLE_01505 4.3e-200 yugH 2.6.1.1 E Aminotransferase
JGIIAPLE_01506 1.6e-85 alaR K Transcriptional regulator
JGIIAPLE_01507 1e-156 yugF I Hydrolase
JGIIAPLE_01508 9.8e-42 yugE S Domain of unknown function (DUF1871)
JGIIAPLE_01509 1.8e-228 patB 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
JGIIAPLE_01510 4.6e-233 T PhoQ Sensor
JGIIAPLE_01511 2e-70 kapB G Kinase associated protein B
JGIIAPLE_01512 1.9e-115 kapD L the KinA pathway to sporulation
JGIIAPLE_01514 3.5e-186 yuxJ EGP Major facilitator Superfamily
JGIIAPLE_01515 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Penicillin-binding Protein
JGIIAPLE_01516 6.3e-75 yuxK S protein conserved in bacteria
JGIIAPLE_01517 6.3e-78 yufK S Family of unknown function (DUF5366)
JGIIAPLE_01518 9.9e-294 dcuS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
JGIIAPLE_01519 2.3e-125 dcuR T COG4565 Response regulator of citrate malate metabolism
JGIIAPLE_01520 2.5e-192 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
JGIIAPLE_01521 1.1e-273 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
JGIIAPLE_01522 6.5e-185 yufP S Belongs to the binding-protein-dependent transport system permease family
JGIIAPLE_01523 4.5e-169 yufQ S Belongs to the binding-protein-dependent transport system permease family
JGIIAPLE_01524 1.3e-233 maeN C COG3493 Na citrate symporter
JGIIAPLE_01525 1.9e-14
JGIIAPLE_01526 0.0 phaA 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
JGIIAPLE_01527 5.4e-69 mrpB P Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
JGIIAPLE_01528 1.5e-50 phaC 1.6.5.3 P Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
JGIIAPLE_01529 3.8e-263 mrpD CP Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
JGIIAPLE_01530 4.8e-79 mrpE P Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
JGIIAPLE_01531 7.2e-38 phaF P Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
JGIIAPLE_01532 5.2e-60 phaG P COG1320 Multisubunit Na H antiporter, MnhG subunit
JGIIAPLE_01533 9.2e-65 ydiI Q protein, possibly involved in aromatic compounds catabolism
JGIIAPLE_01534 5.1e-116 comA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JGIIAPLE_01535 8.2e-221 comP 2.7.13.3 T Histidine kinase
JGIIAPLE_01536 1.9e-193 comP 2.7.13.3 T Histidine kinase
JGIIAPLE_01538 2.5e-162 comQ H Polyprenyl synthetase
JGIIAPLE_01540 1.1e-22 yuzC
JGIIAPLE_01541 2.2e-232 yuxH 3.1.4.52 T signal transduction protein containing EAL and modified HD-GYP domains
JGIIAPLE_01542 3.6e-266 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JGIIAPLE_01543 2.9e-104 pncA Q COG1335 Amidases related to nicotinamidase
JGIIAPLE_01544 1.6e-67 yueI S Protein of unknown function (DUF1694)
JGIIAPLE_01545 7.4e-39 yueH S YueH-like protein
JGIIAPLE_01546 2.1e-32 yueG S Spore germination protein gerPA/gerPF
JGIIAPLE_01547 1.9e-190 yueF S transporter activity
JGIIAPLE_01548 6.1e-72 S Protein of unknown function (DUF2283)
JGIIAPLE_01549 2.9e-24 S Protein of unknown function (DUF2642)
JGIIAPLE_01550 4.8e-96 yueE S phosphohydrolase
JGIIAPLE_01551 4.4e-132 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_01552 6.6e-65 yueC S Family of unknown function (DUF5383)
JGIIAPLE_01553 0.0 esaA S type VII secretion protein EsaA
JGIIAPLE_01554 0.0 essC D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
JGIIAPLE_01555 2.3e-211 essB S WXG100 protein secretion system (Wss), protein YukC
JGIIAPLE_01556 7.7e-41 yukD S WXG100 protein secretion system (Wss), protein YukD
JGIIAPLE_01557 2.8e-45 esxA S Belongs to the WXG100 family
JGIIAPLE_01558 2.6e-236 yukF QT Transcriptional regulator
JGIIAPLE_01559 1.2e-205 ald 1.4.1.1 E Belongs to the AlaDH PNT family
JGIIAPLE_01560 1.1e-132 yukJ S Uncharacterized conserved protein (DUF2278)
JGIIAPLE_01561 3.8e-36 mbtH S MbtH-like protein
JGIIAPLE_01562 0.0 dhbF Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_01563 1.4e-178 entB 3.3.2.1, 6.3.2.14 Q Isochorismatase family
JGIIAPLE_01564 0.0 entE 2.7.7.58, 6.3.2.14 Q 2,3-dihydroxybenzoate-AMP ligase
JGIIAPLE_01565 2.3e-226 entC 5.4.4.2 HQ Isochorismate synthase
JGIIAPLE_01566 7.3e-141 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_01567 1.3e-167 besA S Putative esterase
JGIIAPLE_01568 5.8e-122 yuiH S Oxidoreductase molybdopterin binding domain
JGIIAPLE_01569 1.1e-93 bioY S Biotin biosynthesis protein
JGIIAPLE_01570 3.9e-211 yuiF S antiporter
JGIIAPLE_01571 1.5e-280 pepA 3.4.11.1, 3.4.11.5 E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JGIIAPLE_01572 1.2e-77 yuiD S protein conserved in bacteria
JGIIAPLE_01573 9.5e-118 yuiC S protein conserved in bacteria
JGIIAPLE_01574 8.4e-27 yuiB S Putative membrane protein
JGIIAPLE_01575 2.5e-236 yumB 1.6.99.3 C NADH dehydrogenase
JGIIAPLE_01576 3.5e-188 yumC 1.18.1.2, 1.19.1.1 C reductase
JGIIAPLE_01578 4.9e-187 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JGIIAPLE_01579 9e-118 paiB K Putative FMN-binding domain
JGIIAPLE_01580 4.7e-72 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JGIIAPLE_01581 3.7e-63 erpA S Belongs to the HesB IscA family
JGIIAPLE_01582 2.2e-162 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JGIIAPLE_01583 2.4e-199 yutK F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JGIIAPLE_01584 3.2e-39 yuzB S Belongs to the UPF0349 family
JGIIAPLE_01585 1.2e-199 yutJ 1.6.99.3 C NADH dehydrogenase
JGIIAPLE_01586 3.5e-57 yuzD S protein conserved in bacteria
JGIIAPLE_01587 1.2e-35 yutI O COG0694 Thioredoxin-like proteins and domains
JGIIAPLE_01588 0.0 yuxL 3.4.14.5, 3.4.19.1 EU peptidase
JGIIAPLE_01589 8.6e-173 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
JGIIAPLE_01590 2.3e-198 thrC 4.2.3.1 E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
JGIIAPLE_01591 2.7e-241 hom 1.1.1.3 E homoserine dehydrogenase
JGIIAPLE_01592 2e-199 yutH S Spore coat protein
JGIIAPLE_01593 2.5e-77 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
JGIIAPLE_01594 6.5e-142 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
JGIIAPLE_01595 1e-75 yutE S Protein of unknown function DUF86
JGIIAPLE_01596 9.7e-48 yutD S protein conserved in bacteria
JGIIAPLE_01597 4.9e-111 yutC S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
JGIIAPLE_01598 1e-167 lipA 2.8.1.8 H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JGIIAPLE_01599 4.5e-196 lytH M Peptidase, M23
JGIIAPLE_01600 8.4e-134 yunB S Sporulation protein YunB (Spo_YunB)
JGIIAPLE_01601 4.8e-48 yunC S Domain of unknown function (DUF1805)
JGIIAPLE_01602 5.8e-266 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
JGIIAPLE_01603 2e-141 yunE S membrane transporter protein
JGIIAPLE_01604 4.3e-171 yunF S Protein of unknown function DUF72
JGIIAPLE_01605 3e-62 yunG
JGIIAPLE_01606 1e-259 allB 3.5.2.5 F Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
JGIIAPLE_01607 1.2e-302 pucR QT COG2508 Regulator of polyketide synthase expression
JGIIAPLE_01608 2.1e-236 pbuX F Permease family
JGIIAPLE_01609 1.3e-224 pbuX F xanthine
JGIIAPLE_01610 6.6e-284 uraD 1.7.3.3, 3.5.1.41, 4.1.1.97 Q Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin
JGIIAPLE_01611 7.3e-61 uraH 3.5.2.17, 4.1.1.97 S Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily
JGIIAPLE_01612 7.9e-99 1.17.1.4, 1.2.5.3, 1.3.99.16 C COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
JGIIAPLE_01613 0.0 xdhA 1.17.1.4 C COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
JGIIAPLE_01614 3.4e-152 ygfM 1.17.1.4, 1.2.5.3 C COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
JGIIAPLE_01615 3.6e-111 pucB 1.1.1.328, 1.17.1.4, 2.7.7.76 S MobA-like NTP transferase domain
JGIIAPLE_01616 1.7e-190 pucA 1.17.1.4 O COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
JGIIAPLE_01618 1.9e-239 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
JGIIAPLE_01619 1.6e-238 pucF 3.5.1.6, 3.5.1.87, 3.5.3.9 E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
JGIIAPLE_01620 2.4e-169 bsn L Ribonuclease
JGIIAPLE_01621 1.2e-205 msmX P Belongs to the ABC transporter superfamily
JGIIAPLE_01622 1.1e-135 yurK K UTRA
JGIIAPLE_01623 1.5e-163 yurL 2.7.1.218 G pfkB family carbohydrate kinase
JGIIAPLE_01624 7.3e-169 yurM P COG0395 ABC-type sugar transport system, permease component
JGIIAPLE_01625 1.4e-156 yurN G Binding-protein-dependent transport system inner membrane component
JGIIAPLE_01626 1.3e-240 yurO G COG1653 ABC-type sugar transport system, periplasmic component
JGIIAPLE_01627 1.8e-184 frlB M Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
JGIIAPLE_01628 2.8e-66 yurQ 2.7.7.7 L COG0322 Nuclease subunit of the excinuclease complex
JGIIAPLE_01629 1.8e-209 yurR 1.4.5.1 E COG0665 Glycine D-amino acid oxidases (deaminating)
JGIIAPLE_01631 1e-41
JGIIAPLE_01632 7.6e-67 yurT E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JGIIAPLE_01633 3.5e-271 sufB O FeS cluster assembly
JGIIAPLE_01634 1.4e-77 nifU C COG0822 NifU homolog involved in Fe-S cluster formation
JGIIAPLE_01635 9.4e-236 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JGIIAPLE_01636 1.4e-245 sufD O assembly protein SufD
JGIIAPLE_01637 2.3e-142 sufC O COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
JGIIAPLE_01638 1.1e-62 yurZ 2.3.1.12, 4.1.1.44 S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JGIIAPLE_01639 1.9e-147 metQ P Belongs to the NlpA lipoprotein family
JGIIAPLE_01640 1.4e-95 metI P COG2011 ABC-type metal ion transport system, permease component
JGIIAPLE_01641 4.8e-185 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JGIIAPLE_01642 2.4e-56 yusD S SCP-2 sterol transfer family
JGIIAPLE_01643 5.6e-55 traF CO Thioredoxin
JGIIAPLE_01644 3.3e-74 rnmV 3.1.26.8 L COG1658 Small primase-like proteins (Toprim domain)
JGIIAPLE_01645 1.1e-39 yusG S Protein of unknown function (DUF2553)
JGIIAPLE_01646 9.3e-65 gcvH E Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
JGIIAPLE_01647 2.8e-63 arsC 1.20.4.1 P Belongs to the ArsC family
JGIIAPLE_01648 0.0 fadE 1.3.8.1 I acyl-CoA dehydrogenase
JGIIAPLE_01649 1.4e-217 fadA 2.3.1.16 I Belongs to the thiolase family
JGIIAPLE_01650 0.0 fadB 1.1.1.35, 4.2.1.17, 5.1.2.3 I 3-hydroxyacyl-CoA dehydrogenase
JGIIAPLE_01651 4.7e-09 S YuzL-like protein
JGIIAPLE_01652 2.2e-165 fadM E Proline dehydrogenase
JGIIAPLE_01653 5.1e-40
JGIIAPLE_01654 3.2e-53 yusN M Coat F domain
JGIIAPLE_01655 5.4e-75 yusO K Iron dependent repressor, N-terminal DNA binding domain
JGIIAPLE_01656 3.8e-293 yusP P Major facilitator superfamily
JGIIAPLE_01657 8.4e-66 yusQ S Tautomerase enzyme
JGIIAPLE_01658 2.5e-62 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_01659 2.5e-50 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_01660 2.7e-160 yusT K LysR substrate binding domain
JGIIAPLE_01661 3.8e-47 yusU S Protein of unknown function (DUF2573)
JGIIAPLE_01662 1e-153 yusV 3.6.3.34 HP ABC transporter
JGIIAPLE_01663 5.6e-66 S YusW-like protein
JGIIAPLE_01664 6.3e-258 pepF2 E COG1164 Oligoendopeptidase F
JGIIAPLE_01665 3.9e-34 pepF2 E COG1164 Oligoendopeptidase F
JGIIAPLE_01666 4.7e-154 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_01667 1.2e-79 dps P Ferritin-like domain
JGIIAPLE_01668 9.6e-237 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JGIIAPLE_01669 3.4e-126 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_01670 4.3e-250 cssS 2.7.13.3 T PhoQ Sensor
JGIIAPLE_01671 4.3e-158 yuxN K Transcriptional regulator
JGIIAPLE_01672 2.5e-261 fumC 1.1.1.38, 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
JGIIAPLE_01673 2.3e-24 S Protein of unknown function (DUF3970)
JGIIAPLE_01674 2.2e-247 gerAA EG Spore germination protein
JGIIAPLE_01675 9.1e-198 gerAB E Spore germination protein
JGIIAPLE_01676 4.6e-189 gerAC S Spore germination B3/ GerAC like, C-terminal
JGIIAPLE_01677 1.3e-108 vraR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JGIIAPLE_01678 5.5e-187 vraS 2.7.13.3 T Histidine kinase
JGIIAPLE_01679 5.6e-127 yvqF S Cell wall-active antibiotics response 4TMS YvqF
JGIIAPLE_01680 9.3e-129 liaG S Putative adhesin
JGIIAPLE_01681 2.5e-105 liaH KT COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
JGIIAPLE_01682 5.6e-62 liaI S membrane
JGIIAPLE_01683 4.8e-227 yvqJ EGP Major facilitator Superfamily
JGIIAPLE_01684 6.5e-102 yvqK 2.5.1.17 S Adenosyltransferase
JGIIAPLE_01685 2.8e-249 yvrA 3.6.3.34 HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
JGIIAPLE_01686 7.7e-186 btuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_01687 1.8e-170 yvrC P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
JGIIAPLE_01688 6.2e-140 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_01689 1.5e-171 yvrE G SMP-30/Gluconolaconase/LRE-like region
JGIIAPLE_01690 0.0 T PhoQ Sensor
JGIIAPLE_01691 3.2e-131 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_01692 3.6e-22
JGIIAPLE_01693 1.8e-96 yvrI K RNA polymerase
JGIIAPLE_01694 2.4e-19 S YvrJ protein family
JGIIAPLE_01695 7.3e-230 oxdC 4.1.1.2 G Oxalate decarboxylase
JGIIAPLE_01696 1.3e-64 yvrL S Regulatory protein YrvL
JGIIAPLE_01697 1.8e-210 yvrN V COG0577 ABC-type antimicrobial peptide transport system, permease component
JGIIAPLE_01698 7.1e-124 macB V ABC transporter, ATP-binding protein
JGIIAPLE_01699 4.8e-176 M Efflux transporter rnd family, mfp subunit
JGIIAPLE_01700 4.4e-149 fhuC 3.6.3.34 HP ABC transporter
JGIIAPLE_01701 5.3e-176 fhuG P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_01702 9.3e-184 fhuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_01703 2.1e-179 fhuD P ABC transporter
JGIIAPLE_01705 2.6e-237 yvsH E Arginine ornithine antiporter
JGIIAPLE_01706 6.5e-16 S Small spore protein J (Spore_SspJ)
JGIIAPLE_01707 1e-84 yvsG S LexA-binding, inner membrane-associated putative hydrolase
JGIIAPLE_01708 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
JGIIAPLE_01709 8e-171 yvgK P COG1910 Periplasmic molybdate-binding protein domain
JGIIAPLE_01710 5.8e-138 modA P COG0725 ABC-type molybdate transport system, periplasmic component
JGIIAPLE_01711 4.7e-120 modB P COG4149 ABC-type molybdate transport system, permease component
JGIIAPLE_01712 9.1e-158 yvgN S reductase
JGIIAPLE_01713 5.4e-86 yvgO
JGIIAPLE_01714 0.0 yjcE P COG0025 NhaP-type Na H and K H antiporters
JGIIAPLE_01715 0.0 cysI 1.7.7.1, 1.8.1.2, 1.8.7.1 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
JGIIAPLE_01716 0.0 cysJ 1.8.1.2 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
JGIIAPLE_01717 0.0 helD 3.6.4.12 L DNA helicase
JGIIAPLE_01718 4.1e-107 yvgT S membrane
JGIIAPLE_01719 2.2e-72 bdbC O Required for disulfide bond formation in some proteins
JGIIAPLE_01720 1.6e-104 bdbD O Thioredoxin
JGIIAPLE_01721 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
JGIIAPLE_01722 0.0 copA 3.6.3.54 P P-type ATPase
JGIIAPLE_01723 1.5e-29 copZ P Copper resistance protein CopZ
JGIIAPLE_01724 2.2e-48 csoR S transcriptional
JGIIAPLE_01725 2.1e-199 yvaA 1.1.1.371 S Oxidoreductase
JGIIAPLE_01726 2.4e-118 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JGIIAPLE_01727 0.0 yvaC S Fusaric acid resistance protein-like
JGIIAPLE_01728 5.7e-73 yvaD S Family of unknown function (DUF5360)
JGIIAPLE_01729 2.8e-55 yvaE P Small Multidrug Resistance protein
JGIIAPLE_01730 4.1e-101 K Bacterial regulatory proteins, tetR family
JGIIAPLE_01731 9.1e-131 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_01733 1.6e-82 smpB O Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JGIIAPLE_01734 0.0 rnr K 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
JGIIAPLE_01735 5.6e-143 est 3.1.1.1 S Carboxylesterase
JGIIAPLE_01736 2.4e-23 secG U Preprotein translocase subunit SecG
JGIIAPLE_01737 3.7e-153 yvaM S Serine aminopeptidase, S33
JGIIAPLE_01738 7.5e-36 yvzC K Transcriptional
JGIIAPLE_01739 4e-69 K transcriptional
JGIIAPLE_01740 8e-70 yvaO K Cro/C1-type HTH DNA-binding domain
JGIIAPLE_01741 2.2e-54 yodB K transcriptional
JGIIAPLE_01742 4.2e-226 NT chemotaxis protein
JGIIAPLE_01743 8.1e-112 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
JGIIAPLE_01744 1.1e-172 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
JGIIAPLE_01745 2.5e-110 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
JGIIAPLE_01746 3e-212 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
JGIIAPLE_01747 8.7e-61 yvbF K Belongs to the GbsR family
JGIIAPLE_01748 7.9e-13 S Sporulation delaying protein SdpA
JGIIAPLE_01749 7.6e-172
JGIIAPLE_01750 4.4e-08
JGIIAPLE_01751 3.3e-96 sdpI S Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane
JGIIAPLE_01752 4.5e-45 sdpR K transcriptional
JGIIAPLE_01753 8.7e-114 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
JGIIAPLE_01754 2.5e-172 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
JGIIAPLE_01755 4.5e-112 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
JGIIAPLE_01756 8.8e-212 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
JGIIAPLE_01757 1.4e-98 yvbF K Belongs to the GbsR family
JGIIAPLE_01758 6.4e-103 yvbG U UPF0056 membrane protein
JGIIAPLE_01759 8.6e-113 yvbH S YvbH-like oligomerisation region
JGIIAPLE_01760 4.2e-124 exoY M Membrane
JGIIAPLE_01761 0.0 tcaA S response to antibiotic
JGIIAPLE_01762 7.7e-82 yvbK 3.1.3.25 K acetyltransferase
JGIIAPLE_01763 8.4e-243 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JGIIAPLE_01764 1.3e-298 gpmI 5.4.2.12 G Catalyzes the interconversion of 2-phosphoglycerate and
JGIIAPLE_01765 4.3e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JGIIAPLE_01766 1e-218 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
JGIIAPLE_01767 6.2e-185 gapA 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JGIIAPLE_01768 6.3e-185 cggR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
JGIIAPLE_01769 1.6e-252 araE EGP Major facilitator Superfamily
JGIIAPLE_01770 5.5e-203 araR K transcriptional
JGIIAPLE_01771 1.5e-191 yvbT C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JGIIAPLE_01772 3.9e-159 yvbU K Transcriptional regulator
JGIIAPLE_01773 8.5e-157 yvbV EG EamA-like transporter family
JGIIAPLE_01774 2.8e-241 yvbW E COG1113 Gamma-aminobutyrate permease and related permeases
JGIIAPLE_01775 4.3e-197 yvbX S Glycosyl hydrolase
JGIIAPLE_01776 2.3e-133 lutC S Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
JGIIAPLE_01777 1.2e-274 lutB C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
JGIIAPLE_01778 1.5e-137 lutA C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
JGIIAPLE_01779 2.6e-106 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JGIIAPLE_01780 8.9e-201 desK 2.7.13.3 T Histidine kinase
JGIIAPLE_01781 6.2e-134 yvfS V COG0842 ABC-type multidrug transport system, permease component
JGIIAPLE_01782 3e-162 yvfR V COG1131 ABC-type multidrug transport system, ATPase component
JGIIAPLE_01783 2.6e-157 rsbQ S Alpha/beta hydrolase family
JGIIAPLE_01784 1.4e-199 rsbU 3.1.3.3 T response regulator
JGIIAPLE_01785 2.6e-252 galA 3.2.1.89 G arabinogalactan
JGIIAPLE_01786 0.0 lacA 3.2.1.23 G beta-galactosidase
JGIIAPLE_01787 3.2e-150 ganQ P transport
JGIIAPLE_01788 1.3e-232 malC P COG1175 ABC-type sugar transport systems, permease components
JGIIAPLE_01789 2.9e-232 cycB G COG2182 Maltose-binding periplasmic proteins domains
JGIIAPLE_01790 1.8e-184 lacR K Transcriptional regulator
JGIIAPLE_01791 6.6e-111 yvfI K COG2186 Transcriptional regulators
JGIIAPLE_01792 1.4e-309 yvfH C L-lactate permease
JGIIAPLE_01793 6.5e-243 rpoN K COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
JGIIAPLE_01794 1e-31 yvfG S YvfG protein
JGIIAPLE_01795 5.8e-188 yvfF GM Exopolysaccharide biosynthesis protein
JGIIAPLE_01796 1.2e-224 epsN 2.6.1.102 E Belongs to the DegT DnrJ EryC1 family
JGIIAPLE_01797 2.2e-58 epsM GM COG0110 Acetyltransferase (isoleucine patch superfamily)
JGIIAPLE_01798 2.6e-109 epsL M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
JGIIAPLE_01799 8.9e-260 pglK S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
JGIIAPLE_01800 1.9e-197 epsJ GT2 S COG0463 Glycosyltransferases involved in cell wall biogenesis
JGIIAPLE_01801 3.6e-207 epsI GM pyruvyl transferase
JGIIAPLE_01802 3.6e-196 epsH GT2 S Glycosyltransferase like family 2
JGIIAPLE_01803 4.8e-207 epsG S EpsG family
JGIIAPLE_01804 5.3e-220 epsF GT4 M Glycosyl transferases group 1
JGIIAPLE_01805 4.1e-158 epsE GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
JGIIAPLE_01806 2e-224 epsD GT4 M Glycosyl transferase 4-like
JGIIAPLE_01807 0.0 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 GM Polysaccharide biosynthesis protein
JGIIAPLE_01808 1e-114 epsB 2.7.10.2 D COG0489 ATPases involved in chromosome partitioning
JGIIAPLE_01809 4e-122 ywqC M biosynthesis protein
JGIIAPLE_01810 5.7e-77 slr K transcriptional
JGIIAPLE_01811 4.8e-287 pnbA CE10 I Belongs to the type-B carboxylesterase lipase family
JGIIAPLE_01813 4.6e-93 padC Q Phenolic acid decarboxylase
JGIIAPLE_01814 1.3e-48 MA20_18690 S Protein of unknown function (DUF3237)
JGIIAPLE_01815 3.1e-127 racX 5.1.1.13 M Belongs to the aspartate glutamate racemases family
JGIIAPLE_01816 9.6e-266 pbpE V Beta-lactamase
JGIIAPLE_01817 1.2e-274 sacB 2.4.1.10 GH68 M levansucrase activity
JGIIAPLE_01818 0.0 levB 3.2.1.26, 3.2.1.64, 3.2.1.65, 3.2.1.80 GH32 G Belongs to the glycosyl hydrolase 32 family
JGIIAPLE_01819 1.8e-295 yveA E amino acid
JGIIAPLE_01820 2.6e-106 yvdT K Transcriptional regulator
JGIIAPLE_01821 6.7e-51 ykkC P Small Multidrug Resistance protein
JGIIAPLE_01822 4.1e-50 sugE P Small Multidrug Resistance protein
JGIIAPLE_01823 2.2e-93 yvdQ S Protein of unknown function (DUF3231)
JGIIAPLE_01824 9.2e-269 ygaK C COG0277 FAD FMN-containing dehydrogenases
JGIIAPLE_01825 1.5e-183 S Patatin-like phospholipase
JGIIAPLE_01827 1.2e-103 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JGIIAPLE_01828 1.3e-122 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
JGIIAPLE_01829 0.0 malL 3.2.1.10 GH13 G COG0366 Glycosidases
JGIIAPLE_01830 0.0 yvdK 2.4.1.8 GH65 G Glycoside hydrolase, family 65
JGIIAPLE_01831 1.2e-158 malA S Protein of unknown function (DUF1189)
JGIIAPLE_01832 7.8e-149 malD P transport
JGIIAPLE_01833 5.3e-245 malC P COG1175 ABC-type sugar transport systems, permease components
JGIIAPLE_01834 1.3e-235 mdxE G COG2182 Maltose-binding periplasmic proteins domains
JGIIAPLE_01835 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Alpha amylase, N-terminal ig-like domain
JGIIAPLE_01836 3.6e-174 yvdE K Transcriptional regulator
JGIIAPLE_01837 3.3e-106 yvdD 3.2.2.10 S Belongs to the LOG family
JGIIAPLE_01838 6.8e-53 yvdC S MazG nucleotide pyrophosphohydrolase domain
JGIIAPLE_01839 2.1e-288 sulP P COG0659 Sulfate permease and related transporters (MFS superfamily)
JGIIAPLE_01840 5.7e-106 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
JGIIAPLE_01841 1.3e-184 ghrB 1.1.1.215, 1.1.1.26, 1.1.1.43, 1.1.1.79, 1.1.1.81 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JGIIAPLE_01842 0.0 yxdM V ABC transporter (permease)
JGIIAPLE_01843 5.6e-141 yvcR V ABC transporter, ATP-binding protein
JGIIAPLE_01844 2.3e-198 yvcQ 2.7.13.3 T His Kinase A (phosphoacceptor) domain
JGIIAPLE_01845 3.9e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_01846 1.8e-33
JGIIAPLE_01847 8.6e-147 nhoA 2.3.1.118 Q Belongs to the arylamine N-acetyltransferase family
JGIIAPLE_01848 1.6e-36 crh G Phosphocarrier protein Chr
JGIIAPLE_01849 1.4e-170 whiA K May be required for sporulation
JGIIAPLE_01850 7.3e-178 ybhK S Required for morphogenesis under gluconeogenic growth conditions
JGIIAPLE_01851 5.7e-166 rapZ S Displays ATPase and GTPase activities
JGIIAPLE_01852 1.8e-89 yvcI 3.6.1.55 F COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
JGIIAPLE_01853 1.4e-175 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JGIIAPLE_01854 1.4e-102 usp CBM50 M protein conserved in bacteria
JGIIAPLE_01855 2.4e-278 S COG0457 FOG TPR repeat
JGIIAPLE_01856 0.0 msbA2 3.6.3.44 V ABC transporter
JGIIAPLE_01858 0.0
JGIIAPLE_01859 4.6e-121
JGIIAPLE_01860 8e-114 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E belongs to the PRA-CH family
JGIIAPLE_01861 2.8e-137 hisF E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
JGIIAPLE_01862 3.1e-133 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JGIIAPLE_01863 1.7e-116 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JGIIAPLE_01864 2.1e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
JGIIAPLE_01865 6.6e-232 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JGIIAPLE_01866 1.5e-115 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
JGIIAPLE_01867 4.8e-221 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
JGIIAPLE_01868 4.5e-140 yvpB NU protein conserved in bacteria
JGIIAPLE_01869 5.5e-121 hrpW 4.2.2.10, 4.2.2.2 G Pectate lyase
JGIIAPLE_01870 3e-82 yvoF S COG0110 Acetyltransferase (isoleucine patch superfamily)
JGIIAPLE_01871 1.3e-119 ppaX 3.1.3.18, 3.6.1.1 S Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
JGIIAPLE_01872 1.5e-164 yvoD P COG0370 Fe2 transport system protein B
JGIIAPLE_01873 4.9e-148 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JGIIAPLE_01874 1.7e-168 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JGIIAPLE_01875 6.8e-223 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
JGIIAPLE_01876 8.9e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JGIIAPLE_01877 3.6e-134 yvoA K transcriptional
JGIIAPLE_01878 0.0 yvnB 3.1.4.53 Q Calcineurin-like phosphoesterase
JGIIAPLE_01879 8.5e-84 adcR K helix_turn_helix multiple antibiotic resistance protein
JGIIAPLE_01880 8.2e-232 cypX 1.14.15.13 C Cytochrome P450
JGIIAPLE_01881 1.6e-137 yvmC 2.3.2.22 S Involved in the biosynthesis of pulcherrimin, a red extracellular pigment. It uses activated amino acids in the form of aminoacyl-tRNAs (aa-tRNAs) as substrates to catalyze the ATP- independent formation of cyclodipeptides which are intermediates in diketopiperazine (DKP) biosynthetic pathways. Catalyzes the formation of cyclo(L-Leu-L-Leu) (cLL) from L-leucyl-tRNA(Leu). Can also incorporate various nonpolar residues, such as L- phenylalanine, L-leucine and methionine, into cyclodipeptides
JGIIAPLE_01882 3e-87 yvmB K helix_turn_helix multiple antibiotic resistance protein
JGIIAPLE_01883 2.7e-203 yvmA EGP Major facilitator Superfamily
JGIIAPLE_01884 1.2e-50 yvlD S Membrane
JGIIAPLE_01885 2.6e-26 pspB KT PspC domain
JGIIAPLE_01886 3.4e-168 yvlB S Putative adhesin
JGIIAPLE_01887 8e-49 yvlA
JGIIAPLE_01888 6.7e-34 yvkN
JGIIAPLE_01889 2.9e-79 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JGIIAPLE_01890 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
JGIIAPLE_01891 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JGIIAPLE_01892 1.2e-30 csbA S protein conserved in bacteria
JGIIAPLE_01893 0.0 yvkC 2.7.9.2 GT Phosphotransferase
JGIIAPLE_01894 7e-101 yvkB K Transcriptional regulator
JGIIAPLE_01895 7.9e-228 yvkA EGP Major facilitator Superfamily
JGIIAPLE_01896 4.9e-221 minJ O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JGIIAPLE_01897 1.8e-72 swrA S Swarming motility protein
JGIIAPLE_01898 6.9e-270 ctpB 3.4.21.102 M Belongs to the peptidase S41A family
JGIIAPLE_01899 1.6e-155 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
JGIIAPLE_01900 1.6e-123 ftsE D cell division ATP-binding protein FtsE
JGIIAPLE_01901 5.3e-56 cccB C COG2010 Cytochrome c, mono- and diheme variants
JGIIAPLE_01902 5.5e-142 yvjA S Uncharacterized protein conserved in bacteria (DUF2179)
JGIIAPLE_01903 6.1e-185 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JGIIAPLE_01904 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JGIIAPLE_01905 2.2e-102 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JGIIAPLE_01906 2.8e-66
JGIIAPLE_01907 1.9e-08 fliT S bacterial-type flagellum organization
JGIIAPLE_01908 2.9e-69 fliS N flagellar protein FliS
JGIIAPLE_01909 1.3e-266 fliD N morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JGIIAPLE_01910 6.1e-57 flaG N flagellar protein FlaG
JGIIAPLE_01911 1.9e-156 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JGIIAPLE_01912 2e-30 csrA T Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
JGIIAPLE_01913 2.7e-73 fliW S Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
JGIIAPLE_01914 2.6e-50 yviE
JGIIAPLE_01915 1.1e-156 flgL N Belongs to the bacterial flagellin family
JGIIAPLE_01916 1.2e-264 flgK N flagellar hook-associated protein
JGIIAPLE_01917 2.4e-78 flgN NOU FlgN protein
JGIIAPLE_01918 4.2e-40 flgM KNU Negative regulator of flagellin synthesis
JGIIAPLE_01919 7e-74 yvyF S flagellar protein
JGIIAPLE_01920 2.7e-129 comFC S Phosphoribosyl transferase domain
JGIIAPLE_01921 5.7e-46 comFB S Late competence development protein ComFB
JGIIAPLE_01922 5.6e-269 comFA L COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JGIIAPLE_01923 7.3e-155 degV S protein conserved in bacteria
JGIIAPLE_01924 2e-126 degU KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JGIIAPLE_01925 5.1e-183 degS 2.7.13.3 T Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
JGIIAPLE_01926 2e-120 yvyE 3.4.13.9 S Domain of unknown function (DUF1949)
JGIIAPLE_01927 6e-163 yvhJ K Transcriptional regulator
JGIIAPLE_01928 2.6e-181 tagO 2.7.8.33, 2.7.8.35 M COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
JGIIAPLE_01929 4.4e-238 tuaH M Teichuronic acid biosynthesis glycosyltransferase tuaH
JGIIAPLE_01930 2.1e-145 tuaG GT2 M Glycosyltransferase like family 2
JGIIAPLE_01931 6e-115 tuaF M protein involved in exopolysaccharide biosynthesis
JGIIAPLE_01932 1.7e-263 tuaE M Teichuronic acid biosynthesis protein
JGIIAPLE_01933 2.4e-259 tuaD 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JGIIAPLE_01934 7.4e-222 tuaC 2.4.1.21, 3.2.1.1 GH13,GT4,GT5 GM Teichuronic acid
JGIIAPLE_01935 3.3e-248 wzxC S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
JGIIAPLE_01936 4.6e-112 tuaA M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
JGIIAPLE_01937 3e-268 lytC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
JGIIAPLE_01938 0.0 lytB 3.5.1.28 D Stage II sporulation protein
JGIIAPLE_01939 6e-38
JGIIAPLE_01940 6.1e-163 lytR K May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
JGIIAPLE_01941 8.2e-218 mnaA 5.1.3.14 M Belongs to the UDP-N-acetylglucosamine 2-epimerase family
JGIIAPLE_01942 9e-164 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
JGIIAPLE_01943 0.0 ggaB GT2 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
JGIIAPLE_01944 8.1e-257 ggaA M Glycosyltransferase like family 2
JGIIAPLE_01946 1.6e-100 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
JGIIAPLE_01947 1.8e-279 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
JGIIAPLE_01948 1.1e-150 tagG GM Transport permease protein
JGIIAPLE_01949 0.0 tagF 2.7.8.12 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JGIIAPLE_01950 0.0 tagE 2.4.1.52 GT4 M Glycosyl transferase 1 domain A
JGIIAPLE_01951 5.7e-70 tagD 2.7.7.15, 2.7.7.39 IM Cytidylyltransferase
JGIIAPLE_01952 1.8e-144 tagA 2.4.1.187 GT26 M Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
JGIIAPLE_01953 5e-215 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JGIIAPLE_01954 1.2e-260
JGIIAPLE_01955 7.2e-217 atl 3.2.1.96, 3.5.1.28 GH73 G Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JGIIAPLE_01956 7.1e-191 pmi 5.3.1.8 G mannose-6-phosphate isomerase
JGIIAPLE_01957 3.5e-266 gerBA EG Spore germination protein
JGIIAPLE_01958 7.5e-200 gerBB E Spore germination protein
JGIIAPLE_01959 7.6e-216 gerAC S Spore germination protein
JGIIAPLE_01960 1.9e-248 ywtG EGP Major facilitator Superfamily
JGIIAPLE_01961 8.4e-171 ywtF K Transcriptional regulator
JGIIAPLE_01962 7e-161 ywtE 3.1.3.104 S hydrolases of the HAD superfamily
JGIIAPLE_01963 5.4e-240 pgdS CBM50 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
JGIIAPLE_01964 3.6e-21 ywtC
JGIIAPLE_01965 1.7e-218 capA M enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
JGIIAPLE_01966 8.6e-70 pgsC S biosynthesis protein
JGIIAPLE_01967 6.1e-224 murD 6.3.2.9 M COG0769 UDP-N-acetylmuramyl tripeptide synthase
JGIIAPLE_01968 1.9e-178 rbsR K transcriptional
JGIIAPLE_01969 2.9e-162 rbsK 2.7.1.15, 2.7.1.4 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JGIIAPLE_01970 2.8e-64 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
JGIIAPLE_01971 2.3e-276 rbsA 3.6.3.17 G Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
JGIIAPLE_01972 1.4e-154 rbsC G Belongs to the binding-protein-dependent transport system permease family
JGIIAPLE_01973 4.4e-161 rbsB G COG1879 ABC-type sugar transport system, periplasmic component
JGIIAPLE_01974 4.6e-94 batE T Sh3 type 3 domain protein
JGIIAPLE_01975 3.6e-48 ywsA S Protein of unknown function (DUF3892)
JGIIAPLE_01976 1.5e-97 ywrO S NADPH-quinone reductase (modulator of drug activity B)
JGIIAPLE_01977 1.3e-145 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
JGIIAPLE_01978 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
JGIIAPLE_01979 1.1e-169 alsR K LysR substrate binding domain
JGIIAPLE_01980 1.9e-220 ywrK P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JGIIAPLE_01981 7.5e-126 ywrJ
JGIIAPLE_01982 7.6e-131 cotB
JGIIAPLE_01983 1.2e-210 cotH M Spore Coat
JGIIAPLE_01984 3.7e-12
JGIIAPLE_01985 8.1e-111 ywrF S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JGIIAPLE_01986 2.9e-54 S Domain of unknown function (DUF4181)
JGIIAPLE_01987 9.6e-310 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
JGIIAPLE_01988 2.1e-82 ywrC K Transcriptional regulator
JGIIAPLE_01989 2.4e-104 ywrB P Chromate transporter
JGIIAPLE_01990 6.9e-90 ywrA P COG2059 Chromate transport protein ChrA
JGIIAPLE_01992 2.7e-102 ywqN S NAD(P)H-dependent
JGIIAPLE_01993 2.9e-162 K Transcriptional regulator
JGIIAPLE_01994 4.5e-137 nfi 3.1.21.7 L DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
JGIIAPLE_01995 1.7e-52 S MORN repeat variant
JGIIAPLE_01996 0.0 ywqJ L nucleic acid phosphodiester bond hydrolysis
JGIIAPLE_01997 1.3e-38 ywqI S Family of unknown function (DUF5344)
JGIIAPLE_01998 3.3e-15 S Domain of unknown function (DUF5082)
JGIIAPLE_01999 3.4e-154 ywqG S Domain of unknown function (DUF1963)
JGIIAPLE_02000 3e-248 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JGIIAPLE_02001 1.4e-141 ywqE 3.1.3.48 GM COG4464 Capsular polysaccharide biosynthesis protein
JGIIAPLE_02002 1.1e-119 ywqD 2.7.10.1 D COG0489 ATPases involved in chromosome partitioning
JGIIAPLE_02003 2e-116 ywqC M biosynthesis protein
JGIIAPLE_02004 1.2e-17
JGIIAPLE_02005 3.8e-309 ywqB S SWIM zinc finger
JGIIAPLE_02006 0.0 ywqA L COG0553 Superfamily II DNA RNA helicases, SNF2 family
JGIIAPLE_02007 3.6e-157 ywpJ 3.1.3.104 S hydrolases of the HAD superfamily
JGIIAPLE_02008 8.8e-139 glcR K COG1349 Transcriptional regulators of sugar metabolism
JGIIAPLE_02009 9.8e-58 ssbB L Single-stranded DNA-binding protein
JGIIAPLE_02010 1.3e-66 ywpG
JGIIAPLE_02011 1.1e-66 ywpF S YwpF-like protein
JGIIAPLE_02012 8e-51 srtA 3.4.22.70 M Sortase family
JGIIAPLE_02013 1.9e-153 ywpD T Histidine kinase
JGIIAPLE_02014 1.5e-54 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JGIIAPLE_02015 4.6e-82 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
JGIIAPLE_02016 2.1e-199 S aspartate phosphatase
JGIIAPLE_02017 1.5e-141 flhP N flagellar basal body
JGIIAPLE_02018 6.9e-126 flhO N flagellar basal body
JGIIAPLE_02019 3.5e-180 mbl D Rod shape-determining protein
JGIIAPLE_02020 3e-44 spoIIID K Stage III sporulation protein D
JGIIAPLE_02021 2.1e-70 ywoH K COG1846 Transcriptional regulators
JGIIAPLE_02022 2.7e-211 ywoG EGP Major facilitator Superfamily
JGIIAPLE_02023 1.2e-231 ywoF P Right handed beta helix region
JGIIAPLE_02024 3e-281 ybbW FH COG1953 Cytosine uracil thiamine allantoin permeases
JGIIAPLE_02025 4.4e-242 ywoD EGP Major facilitator superfamily
JGIIAPLE_02026 4e-104 phzA Q Isochorismatase family
JGIIAPLE_02027 1.2e-77
JGIIAPLE_02028 2.5e-225 amt P Ammonium transporter
JGIIAPLE_02029 1.6e-58 nrgB K Belongs to the P(II) protein family
JGIIAPLE_02030 3.4e-103 bcrC 3.6.1.27 I COG0671 Membrane-associated phospholipid phosphatase
JGIIAPLE_02031 3.5e-73 ywnJ S VanZ like family
JGIIAPLE_02032 5.5e-126 spoIIQ M COG0739 Membrane proteins related to metalloendopeptidases
JGIIAPLE_02033 6.4e-90 ywnH 2.3.1.183 M COG1247 Sortase and related acyltransferases
JGIIAPLE_02034 2.7e-14 ywnC S Family of unknown function (DUF5362)
JGIIAPLE_02035 2.2e-70 ywnF S Family of unknown function (DUF5392)
JGIIAPLE_02036 1.2e-277 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JGIIAPLE_02037 4.1e-144 mta K transcriptional
JGIIAPLE_02038 2.6e-59 ywnC S Family of unknown function (DUF5362)
JGIIAPLE_02039 1.6e-114 ywnB S NAD(P)H-binding
JGIIAPLE_02040 1.7e-64 ywnA K Transcriptional regulator
JGIIAPLE_02041 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
JGIIAPLE_02042 5.9e-64 ureB 3.5.1.5 E Belongs to the urease beta subunit family
JGIIAPLE_02043 6.3e-51 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
JGIIAPLE_02045 3.8e-11 csbD K CsbD-like
JGIIAPLE_02046 3e-84 ywmF S Peptidase M50
JGIIAPLE_02047 1.3e-103 S response regulator aspartate phosphatase
JGIIAPLE_02048 7e-192 moaA 4.1.99.22, 4.6.1.17 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JGIIAPLE_02049 2.6e-146 fdhD C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JGIIAPLE_02051 7.2e-121 ywmD S protein containing a von Willebrand factor type A (vWA) domain
JGIIAPLE_02052 1.7e-122 ywmC S protein containing a von Willebrand factor type A (vWA) domain
JGIIAPLE_02053 2e-178 spoIID D Stage II sporulation protein D
JGIIAPLE_02054 1.2e-241 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JGIIAPLE_02055 1.6e-134 ywmB S TATA-box binding
JGIIAPLE_02056 1.3e-32 ywzB S membrane
JGIIAPLE_02057 4.3e-88 ywmA
JGIIAPLE_02058 5.9e-54 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
JGIIAPLE_02059 1.2e-266 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JGIIAPLE_02060 1.1e-150 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JGIIAPLE_02061 6.9e-281 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JGIIAPLE_02062 1.1e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JGIIAPLE_02063 3.8e-45 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JGIIAPLE_02064 1.6e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JGIIAPLE_02065 4.6e-129 atpB C it plays a direct role in the translocation of protons across the membrane
JGIIAPLE_02066 2.5e-62 atpI S ATP synthase
JGIIAPLE_02067 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JGIIAPLE_02068 2.1e-238 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JGIIAPLE_02069 7.2e-95 ywlG S Belongs to the UPF0340 family
JGIIAPLE_02070 1.7e-81 rpiB 5.3.1.6 G Ribose 5-phosphate isomerase
JGIIAPLE_02071 1.7e-78 ywlE 3.1.3.48, 3.9.1.2, 5.3.1.6 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JGIIAPLE_02072 1.7e-91 mntP P Probably functions as a manganese efflux pump
JGIIAPLE_02073 1.2e-196 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
JGIIAPLE_02074 1.2e-76 ywlB 1.20.4.1, 2.3.1.1 E Belongs to the acetyltransferase family. ArgA subfamily
JGIIAPLE_02075 6.1e-112 spoIIR S stage II sporulation protein R
JGIIAPLE_02076 3.4e-56 ywlA S Uncharacterised protein family (UPF0715)
JGIIAPLE_02078 2.3e-159 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JGIIAPLE_02079 9.5e-192 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JGIIAPLE_02080 8.2e-69 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JGIIAPLE_02081 1.7e-91 racA K Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
JGIIAPLE_02082 8.6e-160 ywkB S Membrane transport protein
JGIIAPLE_02083 0.0 sfcA 1.1.1.38 C malic enzyme
JGIIAPLE_02084 2.4e-104 tdk 2.7.1.21 F thymidine kinase
JGIIAPLE_02085 1.1e-32 rpmE J Binds the 23S rRNA
JGIIAPLE_02086 2.8e-238 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JGIIAPLE_02087 1.9e-175 glpX 3.1.3.11, 3.1.3.37 G fructose-1,6-bisphosphatase
JGIIAPLE_02088 8.6e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JGIIAPLE_02089 1.5e-112 tal 2.2.1.2 G Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JGIIAPLE_02090 7.2e-158 fbaA 4.1.2.13, 4.1.2.29 G Aldolase
JGIIAPLE_02091 1.1e-62 spo0F T COG0784 FOG CheY-like receiver
JGIIAPLE_02092 2.4e-92 ywjG S Domain of unknown function (DUF2529)
JGIIAPLE_02093 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JGIIAPLE_02094 1.5e-49 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
JGIIAPLE_02095 2.6e-211 acdA 1.3.8.1, 1.3.8.7 I acyl-CoA dehydrogenase
JGIIAPLE_02096 0.0 fadF C COG0247 Fe-S oxidoreductase
JGIIAPLE_02097 2.3e-223 clsB I Belongs to the phospholipase D family. Cardiolipin synthase subfamily
JGIIAPLE_02098 6.6e-184 uvsE L Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
JGIIAPLE_02099 2.7e-42 ywjC
JGIIAPLE_02100 4.8e-96 ywjB H RibD C-terminal domain
JGIIAPLE_02101 0.0 ywjA V ABC transporter
JGIIAPLE_02102 6.4e-287 ywiE I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JGIIAPLE_02103 1.8e-124 narI 1.7.5.1 C nitrate reductase, gamma
JGIIAPLE_02104 2.4e-98 narJ 1.7.5.1 C nitrate reductase
JGIIAPLE_02105 1e-297 narH 1.7.5.1 C Nitrate reductase, beta
JGIIAPLE_02106 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JGIIAPLE_02107 7e-86 arfM T cyclic nucleotide binding
JGIIAPLE_02108 4.3e-140 ywiC S YwiC-like protein
JGIIAPLE_02109 5.3e-130 fnr K helix_turn_helix, cAMP Regulatory protein
JGIIAPLE_02110 9.8e-214 narK P COG2223 Nitrate nitrite transporter
JGIIAPLE_02111 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
JGIIAPLE_02112 4.7e-73 ywiB S protein conserved in bacteria
JGIIAPLE_02113 1e-07 S Bacteriocin subtilosin A
JGIIAPLE_02114 2.6e-271 C Fe-S oxidoreductases
JGIIAPLE_02116 3.3e-132 cbiO V ABC transporter
JGIIAPLE_02117 3.1e-237 mgtA 3.6.3.2 P ATPase, P-type transporting, HAD superfamily, subfamily IC
JGIIAPLE_02118 2.7e-219 2.7.1.26, 2.7.7.2 L Peptidase, M16
JGIIAPLE_02119 1.2e-249 L Peptidase, M16
JGIIAPLE_02121 2.9e-249 ywhL CO amine dehydrogenase activity
JGIIAPLE_02122 2.5e-205 ywhK CO amine dehydrogenase activity
JGIIAPLE_02123 2.3e-79 S aspartate phosphatase
JGIIAPLE_02125 1e-84 ywhH S Aminoacyl-tRNA editing domain
JGIIAPLE_02126 9.2e-169 speB 3.5.3.11 E Belongs to the arginase family
JGIIAPLE_02127 1.4e-158 speE 2.5.1.16 E Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JGIIAPLE_02128 0.0 pbpG 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JGIIAPLE_02129 5.2e-95 ywhD S YwhD family
JGIIAPLE_02130 5.1e-119 ywhC S Peptidase family M50
JGIIAPLE_02131 2.7e-25 dmpI 5.3.2.6 G 4-oxalocrotonate tautomerase
JGIIAPLE_02132 3.3e-71 ywhA K Transcriptional regulator
JGIIAPLE_02133 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JGIIAPLE_02135 2.6e-242 mmr U Major Facilitator Superfamily
JGIIAPLE_02136 2.8e-79 yffB K Transcriptional regulator
JGIIAPLE_02137 5.4e-89 ywgA 2.1.1.72, 3.1.21.3
JGIIAPLE_02138 1.8e-256 ywfO S COG1078 HD superfamily phosphohydrolases
JGIIAPLE_02139 3.1e-36 ywzC S Belongs to the UPF0741 family
JGIIAPLE_02140 1.6e-111 rsfA_1
JGIIAPLE_02141 5.2e-159 ywfM EG EamA-like transporter family
JGIIAPLE_02142 6.6e-156 lipL 2.3.1.200, 2.3.1.204 H Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
JGIIAPLE_02143 9.2e-164 cysL K Transcriptional regulator
JGIIAPLE_02144 6.6e-176 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C In Salmonella this enzyme is required for ethanolamine catabolism
JGIIAPLE_02145 1.1e-146 ywfI C May function as heme-dependent peroxidase
JGIIAPLE_02146 4e-139 IQ Enoyl-(Acyl carrier protein) reductase
JGIIAPLE_02147 2.7e-235 ywfG 2.6.1.83 E Aminotransferase class I and II
JGIIAPLE_02148 2.9e-210 bacE EGP Major facilitator Superfamily
JGIIAPLE_02149 3.6e-271 purD 6.3.2.49, 6.3.4.13 F Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)
JGIIAPLE_02150 1.3e-139 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_02151 1.3e-136 bacB 5.3.3.19, 5.4.99.5 S Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the
JGIIAPLE_02152 8.6e-113 pheA 1.1.1.3, 1.3.1.12, 4.1.1.100, 4.2.1.51, 5.4.99.5 E Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate
JGIIAPLE_02153 4.6e-206 ywfA EGP Major facilitator Superfamily
JGIIAPLE_02154 4e-262 lysP E amino acid
JGIIAPLE_02155 0.0 rocB E arginine degradation protein
JGIIAPLE_02156 1.4e-297 putA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
JGIIAPLE_02157 7.5e-244 rocG 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
JGIIAPLE_02158 1.8e-78
JGIIAPLE_02159 3.5e-87 spsL 5.1.3.13 M Spore Coat
JGIIAPLE_02160 5.3e-161 spsK 1.1.1.133 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
JGIIAPLE_02161 1e-181 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
JGIIAPLE_02162 1.9e-138 spsI 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JGIIAPLE_02163 1.7e-190 spsG M Spore Coat
JGIIAPLE_02164 9.7e-132 spsF M Spore Coat
JGIIAPLE_02165 3.2e-214 spsE 2.5.1.56 M acid synthase
JGIIAPLE_02166 4e-164 spsD 2.3.1.210 K Spore Coat
JGIIAPLE_02167 1.6e-224 spsC E Belongs to the DegT DnrJ EryC1 family
JGIIAPLE_02168 1.5e-269 spsB M Capsule polysaccharide biosynthesis protein
JGIIAPLE_02169 2.8e-145 spsA M Spore Coat
JGIIAPLE_02170 4.8e-75 gerQ S Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
JGIIAPLE_02171 4.3e-59 ywdK S small membrane protein
JGIIAPLE_02172 1.3e-238 ywdJ F Xanthine uracil
JGIIAPLE_02173 7.7e-49 ywdI S Family of unknown function (DUF5327)
JGIIAPLE_02174 5.9e-263 ywdH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
JGIIAPLE_02175 5e-130 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JGIIAPLE_02176 1.1e-152 ywdF GT2,GT4 S Glycosyltransferase like family 2
JGIIAPLE_02178 1.4e-113 ywdD
JGIIAPLE_02179 1.3e-57 pex K Transcriptional regulator PadR-like family
JGIIAPLE_02180 9.3e-147 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
JGIIAPLE_02181 2e-28 ywdA
JGIIAPLE_02182 9.5e-296 scrB 3.2.1.26, 3.2.1.65, 3.2.1.80 GH32 G invertase
JGIIAPLE_02183 3.9e-254 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JGIIAPLE_02184 1e-139 focA P Formate/nitrite transporter
JGIIAPLE_02185 2.4e-150 sacT K transcriptional antiterminator
JGIIAPLE_02187 0.0 vpr O Belongs to the peptidase S8 family
JGIIAPLE_02188 5.1e-187 ywcH C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JGIIAPLE_02189 7.2e-138 nfrA 1.5.1.38, 1.5.1.39 C Oxidoreductase
JGIIAPLE_02190 2.9e-202 rodA D Belongs to the SEDS family
JGIIAPLE_02191 6e-39 ywcE S Required for proper spore morphogenesis. Important for spore germination
JGIIAPLE_02192 2.6e-64 qoxD 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
JGIIAPLE_02193 1.2e-111 qoxC 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
JGIIAPLE_02194 0.0 qoxB 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JGIIAPLE_02195 2.1e-177 cyoA 1.10.3.10, 1.10.3.12 C Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
JGIIAPLE_02196 1e-35 ywzA S membrane
JGIIAPLE_02197 3.7e-306 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
JGIIAPLE_02198 6.2e-229 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JGIIAPLE_02199 9.5e-60 gtcA S GtrA-like protein
JGIIAPLE_02200 2.2e-122 ywcC K transcriptional regulator
JGIIAPLE_02202 9.8e-49 ywcB S Protein of unknown function, DUF485
JGIIAPLE_02203 1.4e-268 ywcA S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JGIIAPLE_02204 1.9e-112 ywbO Q dithiol-disulfide isomerase involved in polyketide biosynthesis
JGIIAPLE_02205 2.6e-225 ywbN P Dyp-type peroxidase family protein
JGIIAPLE_02206 2e-187 ycdO P periplasmic lipoprotein involved in iron transport
JGIIAPLE_02207 8.2e-255 P COG0672 High-affinity Fe2 Pb2 permease
JGIIAPLE_02208 4.1e-116 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
JGIIAPLE_02209 2.8e-143 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JGIIAPLE_02210 4.3e-153 ywbI K Transcriptional regulator
JGIIAPLE_02211 6.5e-58 ywbH S Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
JGIIAPLE_02212 2.3e-111 ywbG M effector of murein hydrolase
JGIIAPLE_02213 1.9e-209 ywbF EGP Major facilitator Superfamily
JGIIAPLE_02214 1.2e-28 ywbE S Uncharacterized conserved protein (DUF2196)
JGIIAPLE_02215 8.9e-223 ywbD 2.1.1.191 J Methyltransferase
JGIIAPLE_02216 4.4e-67 ywbC 4.4.1.5 E glyoxalase
JGIIAPLE_02217 1.8e-127 ywbB S Protein of unknown function (DUF2711)
JGIIAPLE_02218 5.8e-247 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JGIIAPLE_02219 1.6e-277 epr 3.4.21.62 O Belongs to the peptidase S8 family
JGIIAPLE_02220 5.2e-243 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JGIIAPLE_02221 4e-153 sacY K transcriptional antiterminator
JGIIAPLE_02222 7e-169 gspA M General stress
JGIIAPLE_02223 1.7e-128 ywaF S Integral membrane protein
JGIIAPLE_02224 8.1e-88 ywaE K Transcriptional regulator
JGIIAPLE_02225 4.4e-233 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JGIIAPLE_02226 1.4e-251 ywaD 3.4.11.10, 3.4.11.6 S PA domain
JGIIAPLE_02227 5e-116 ywaC 2.7.6.5 S protein conserved in bacteria
JGIIAPLE_02228 5.4e-167 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
JGIIAPLE_02229 5e-14 S D-Ala-teichoic acid biosynthesis protein
JGIIAPLE_02230 7.9e-293 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_02231 1.2e-232 dltB M membrane protein involved in D-alanine export
JGIIAPLE_02232 1.5e-36 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_02233 2.3e-231 dltD M COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JGIIAPLE_02234 6.6e-139 dltE M Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_02235 3.1e-206 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
JGIIAPLE_02236 1.1e-253 licH 3.2.1.86 GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
JGIIAPLE_02237 6.7e-38 licA 2.7.1.196, 2.7.1.205 G phosphotransferase system
JGIIAPLE_02238 7.4e-250 licC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JGIIAPLE_02239 2.3e-50 licB 2.7.1.196, 2.7.1.205 G transporter subunit IIB
JGIIAPLE_02240 0.0 licR 2.7.1.202 GKT Mga helix-turn-helix domain
JGIIAPLE_02241 1.1e-19 yxzF
JGIIAPLE_02242 1e-110 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
JGIIAPLE_02243 0.0 katX 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
JGIIAPLE_02244 2.1e-216 yxlH EGP Major facilitator Superfamily
JGIIAPLE_02245 1.8e-139 yxlG S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
JGIIAPLE_02246 5.1e-167 yxlF V ABC transporter, ATP-binding protein
JGIIAPLE_02247 7.6e-28 yxlE S Phospholipase_D-nuclease N-terminal
JGIIAPLE_02248 1.2e-31
JGIIAPLE_02249 3.9e-48 yxlC S Family of unknown function (DUF5345)
JGIIAPLE_02250 4.7e-91 sigY K Belongs to the sigma-70 factor family. ECF subfamily
JGIIAPLE_02251 2.3e-254 yxlA F Belongs to the purine-cytosine permease (2.A.39) family
JGIIAPLE_02252 8e-162 nnrD 4.2.1.136, 5.1.99.6 G Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JGIIAPLE_02253 0.0 cydD V ATP-binding protein
JGIIAPLE_02254 0.0 cydD V ATP-binding
JGIIAPLE_02255 2.9e-190 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase, subunit II
JGIIAPLE_02256 1.3e-268 cydA 1.10.3.14 C oxidase, subunit
JGIIAPLE_02257 1.5e-229 cimH C COG3493 Na citrate symporter
JGIIAPLE_02258 0.0 3.4.24.84 O Peptidase family M48
JGIIAPLE_02260 3e-156 yxkH G Polysaccharide deacetylase
JGIIAPLE_02261 5.9e-205 msmK P Belongs to the ABC transporter superfamily
JGIIAPLE_02262 4.8e-165 lrp QT PucR C-terminal helix-turn-helix domain
JGIIAPLE_02263 2.5e-275 aldY 1.2.1.3 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
JGIIAPLE_02264 1.9e-147 yxkD S Uncharacterised 5xTM membrane BCR, YitT family COG1284
JGIIAPLE_02265 4.1e-73 yxkC S Domain of unknown function (DUF4352)
JGIIAPLE_02266 4.6e-196 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JGIIAPLE_02267 1.3e-95 yxkA S Phosphatidylethanolamine-binding protein
JGIIAPLE_02268 1.9e-166 yxjO K LysR substrate binding domain
JGIIAPLE_02269 2.4e-78 S Protein of unknown function (DUF1453)
JGIIAPLE_02270 1.5e-193 yxjM T Signal transduction histidine kinase
JGIIAPLE_02271 8.9e-116 K helix_turn_helix, Lux Regulon
JGIIAPLE_02272 3.6e-235 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
JGIIAPLE_02275 1e-87 yxjI S LURP-one-related
JGIIAPLE_02276 5.5e-222 yxjG 2.1.1.14 E Methionine synthase
JGIIAPLE_02277 1e-220 yxjG 2.1.1.14 E Methionine synthase
JGIIAPLE_02278 1.3e-137 IQ Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
JGIIAPLE_02279 5.2e-116 scoB 2.8.3.5 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
JGIIAPLE_02280 1.4e-130 scoA 2.8.3.5 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JGIIAPLE_02281 2.6e-253 yxjC EG COG2610 H gluconate symporter and related permeases
JGIIAPLE_02282 3.1e-161 rlmA 2.1.1.187 Q Methyltransferase domain
JGIIAPLE_02283 1.9e-212 nupG F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JGIIAPLE_02284 1.2e-22 T Domain of unknown function (DUF4163)
JGIIAPLE_02285 2.7e-48 yxiS
JGIIAPLE_02286 0.0 katE 1.11.1.6, 3.5.1.124 P serves to protect cells from the toxic effects of hydrogen peroxide
JGIIAPLE_02287 6.6e-224 citH C Citrate transporter
JGIIAPLE_02288 5e-144 exoK GH16 M licheninase activity
JGIIAPLE_02289 8.3e-151 licT K transcriptional antiterminator
JGIIAPLE_02290 6.6e-114
JGIIAPLE_02291 3e-232 yxiO S COG2270 Permeases of the major facilitator superfamily
JGIIAPLE_02292 1e-265 dbpA 3.6.4.13 JKL DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
JGIIAPLE_02293 7.5e-219 3.2.1.14 GH18 E GDSL-like Lipase/Acylhydrolase
JGIIAPLE_02296 1.6e-48 yxiJ S YxiJ-like protein
JGIIAPLE_02297 1.2e-96 yxiI S Protein of unknown function (DUF2716)
JGIIAPLE_02298 3.8e-81
JGIIAPLE_02299 4.9e-46
JGIIAPLE_02300 3.7e-75 yxiG
JGIIAPLE_02301 6.4e-63
JGIIAPLE_02302 1.7e-84
JGIIAPLE_02303 1.5e-71 yxxG
JGIIAPLE_02304 0.0 wapA M COG3209 Rhs family protein
JGIIAPLE_02305 2.9e-168 yxxF EG EamA-like transporter family
JGIIAPLE_02306 1.1e-72 yxiE T Belongs to the universal stress protein A family
JGIIAPLE_02307 6.6e-281 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JGIIAPLE_02308 0.0 bglF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JGIIAPLE_02309 3.6e-51
JGIIAPLE_02310 2.2e-78 S SMI1 / KNR4 family
JGIIAPLE_02311 0.0 S nuclease activity
JGIIAPLE_02312 3.6e-39 yxiC S Family of unknown function (DUF5344)
JGIIAPLE_02313 2.1e-21 S Domain of unknown function (DUF5082)
JGIIAPLE_02314 6.3e-284 yxiA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
JGIIAPLE_02315 5e-78 hutP K Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
JGIIAPLE_02316 2.3e-284 hutH 4.3.1.3 E Histidine ammonia-lyase
JGIIAPLE_02317 0.0 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JGIIAPLE_02318 1.2e-238 hutI 3.5.2.7 Q Imidazolone-5-propionate hydrolase
JGIIAPLE_02319 8e-182 hutG 3.5.3.11, 3.5.3.8 E Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
JGIIAPLE_02320 6.1e-252 lysP E amino acid
JGIIAPLE_02321 4.2e-234 pdp 2.4.2.2, 2.4.2.4 F phosphorylase
JGIIAPLE_02322 9.8e-206 nupC F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JGIIAPLE_02323 7e-116 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JGIIAPLE_02324 3.5e-174 deoR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
JGIIAPLE_02325 3e-153 yxxB S Domain of Unknown Function (DUF1206)
JGIIAPLE_02326 6.8e-201 eutH E Ethanolamine utilisation protein, EutH
JGIIAPLE_02327 2e-255 yxeQ S MmgE/PrpD family
JGIIAPLE_02328 3.8e-215 yxeP 3.5.1.47 E hydrolase activity
JGIIAPLE_02329 5.4e-133 yxeO 3.6.3.21 P ABC transporter, ATP-binding protein
JGIIAPLE_02330 5.4e-108 yxeN P COG0765 ABC-type amino acid transport system, permease component
JGIIAPLE_02331 2.5e-144 yxeM M Belongs to the bacterial solute-binding protein 3 family
JGIIAPLE_02332 7.3e-94 yxeL K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JGIIAPLE_02333 2.2e-254 yxeK C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JGIIAPLE_02335 8.8e-192 yxeI 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
JGIIAPLE_02336 6.2e-151 yidA S hydrolases of the HAD superfamily
JGIIAPLE_02339 1.3e-20 yxeE
JGIIAPLE_02340 1.9e-16 yxeD
JGIIAPLE_02341 8.5e-69
JGIIAPLE_02342 6e-177 fhuD P ABC transporter
JGIIAPLE_02343 1.5e-58 yxeA S Protein of unknown function (DUF1093)
JGIIAPLE_02344 0.0 yxdM V ABC transporter (permease)
JGIIAPLE_02345 9.4e-141 yxdL V ABC transporter, ATP-binding protein
JGIIAPLE_02346 1.3e-182 T PhoQ Sensor
JGIIAPLE_02347 4.2e-124 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_02348 5.4e-161 iolJ 4.1.2.13, 4.1.2.29 F Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
JGIIAPLE_02349 1.9e-139 iolI 5.3.99.11 G Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
JGIIAPLE_02350 2.3e-167 iolH G Xylose isomerase-like TIM barrel
JGIIAPLE_02351 2.8e-196 iolG 1.1.1.18, 1.1.1.369 S Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
JGIIAPLE_02352 1.3e-235 iolF EGP Major facilitator Superfamily
JGIIAPLE_02353 2.1e-176 iolE 4.2.1.44 G Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
JGIIAPLE_02354 0.0 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
JGIIAPLE_02355 2.9e-179 iolC 2.7.1.92 G Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
JGIIAPLE_02356 1.1e-155 iolB 5.3.1.30 G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
JGIIAPLE_02357 1.4e-281 iolA 1.2.1.18, 1.2.1.27 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
JGIIAPLE_02358 3.3e-138 iolR K COG1349 Transcriptional regulators of sugar metabolism
JGIIAPLE_02359 3.7e-176 iolS C Aldo keto reductase
JGIIAPLE_02361 8.3e-48 yxcD S Protein of unknown function (DUF2653)
JGIIAPLE_02362 2.3e-246 csbC EGP Major facilitator Superfamily
JGIIAPLE_02363 0.0 htpG O Molecular chaperone. Has ATPase activity
JGIIAPLE_02365 5.7e-152 IQ Enoyl-(Acyl carrier protein) reductase
JGIIAPLE_02366 2.2e-215 yxbF K Bacterial regulatory proteins, tetR family
JGIIAPLE_02367 1.4e-248 alkH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
JGIIAPLE_02368 1.6e-85 yxbD 3.2.2.20 K Acetyltransferase (GNAT) domain
JGIIAPLE_02369 2.2e-187 yxbC 1.14.11.47 S A domain family that is part of the cupin metalloenzyme superfamily.
JGIIAPLE_02370 3.3e-127 yxbB Q Met-10+ like-protein
JGIIAPLE_02371 4.9e-44 S Coenzyme PQQ synthesis protein D (PqqD)
JGIIAPLE_02372 1.1e-86 yxnB
JGIIAPLE_02373 0.0 asnB 6.3.5.4 E Asparagine synthase
JGIIAPLE_02374 7.6e-214 yxaM U MFS_1 like family
JGIIAPLE_02375 6.8e-93 S PQQ-like domain
JGIIAPLE_02376 3.5e-65 S Family of unknown function (DUF5391)
JGIIAPLE_02377 1.1e-75 yxaI S membrane protein domain
JGIIAPLE_02378 1.4e-228 P Protein of unknown function (DUF418)
JGIIAPLE_02379 1.5e-199 yxaG 1.13.11.24 S AraC-like ligand binding domain
JGIIAPLE_02380 7.1e-101 yxaF K Transcriptional regulator
JGIIAPLE_02381 2.3e-201 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_02382 4.4e-71 yxaD K helix_turn_helix multiple antibiotic resistance protein
JGIIAPLE_02383 5.2e-50 S LrgA family
JGIIAPLE_02384 2.6e-118 yxaC M effector of murein hydrolase
JGIIAPLE_02385 1.3e-193 yxaB GM Polysaccharide pyruvyl transferase
JGIIAPLE_02386 7e-209 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
JGIIAPLE_02387 7.3e-127 gntR K transcriptional
JGIIAPLE_02388 4.6e-304 gntK 2.7.1.12, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
JGIIAPLE_02389 4.5e-231 gntP EG COG2610 H gluconate symporter and related permeases
JGIIAPLE_02390 3.8e-273 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JGIIAPLE_02391 2.1e-105 ahpC 1.11.1.15 O Alkyl hydroperoxide reductase
JGIIAPLE_02392 3.8e-287 ahpF O Alkyl hydroperoxide reductase
JGIIAPLE_02393 6.4e-292 bglA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JGIIAPLE_02394 2.3e-34 2.7.1.199 G phosphoenolpyruvate-dependent sugar phosphotransferase system
JGIIAPLE_02395 1.3e-128 yydK K Transcriptional regulator
JGIIAPLE_02396 7.6e-13
JGIIAPLE_02397 3.3e-119 S ABC-2 family transporter protein
JGIIAPLE_02398 1.8e-110 prrC P ABC transporter
JGIIAPLE_02399 8.4e-134 yydH O Peptidase M50
JGIIAPLE_02400 7.7e-185 S Radical SAM superfamily
JGIIAPLE_02401 8e-12
JGIIAPLE_02402 0.0 fbp 3.1.3.11 G Firmicute fructose-1,6-bisphosphatase
JGIIAPLE_02403 0.0 S Uncharacterised protein conserved in bacteria (DUF2326)
JGIIAPLE_02404 3.5e-65
JGIIAPLE_02405 7.3e-280 S Calcineurin-like phosphoesterase
JGIIAPLE_02406 5.2e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JGIIAPLE_02407 1.1e-09 S YyzF-like protein
JGIIAPLE_02408 4.2e-71
JGIIAPLE_02409 3e-234 fdhA 1.1.1.1, 1.1.1.14, 1.1.1.284, 1.2.1.46 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
JGIIAPLE_02411 2.1e-33 yycQ S Protein of unknown function (DUF2651)
JGIIAPLE_02412 1.6e-221 yycP
JGIIAPLE_02413 5.8e-132 yycO S Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
JGIIAPLE_02414 3.1e-86 yycN 2.3.1.128 K Acetyltransferase
JGIIAPLE_02415 5e-188 S aspartate phosphatase
JGIIAPLE_02417 2.3e-167 rocF 3.5.3.1, 3.5.3.11 E Belongs to the arginase family
JGIIAPLE_02418 9.7e-261 rocE E amino acid
JGIIAPLE_02419 3.1e-234 rocD 2.6.1.11, 2.6.1.13, 2.6.1.17 E Catalyzes the interconversion of ornithine to glutamate semialdehyde
JGIIAPLE_02420 1.5e-258 rocR KT COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
JGIIAPLE_02421 8.4e-221 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JGIIAPLE_02422 8.7e-150 vicX 3.1.26.11 S COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
JGIIAPLE_02423 7.3e-155 yycI S protein conserved in bacteria
JGIIAPLE_02424 3.6e-260 yycH S protein conserved in bacteria
JGIIAPLE_02425 0.0 vicK 2.7.13.3 T Histidine kinase
JGIIAPLE_02426 1.1e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_02428 9.3e-17 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_02429 2.1e-08 ydbD P Catalase
JGIIAPLE_02433 8.8e-12 3.4.24.84 O Peptidase family M48
JGIIAPLE_02434 5.4e-07 pks13 HQ Beta-ketoacyl synthase
JGIIAPLE_02436 4.7e-11 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
JGIIAPLE_02444 3e-07 araE EGP Major facilitator Superfamily
JGIIAPLE_02448 2.9e-26 yrkN K Acetyltransferase (GNAT) family
JGIIAPLE_02449 5.9e-08 ytdP K Transcriptional regulator
JGIIAPLE_02450 3.3e-13 rimL 1.1.1.25 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
JGIIAPLE_02455 8.1e-12 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
JGIIAPLE_02478 5.2e-12 phaA 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
JGIIAPLE_02479 2.6e-08 ydhC K FCD
JGIIAPLE_02480 9.2e-10 yobO M Pectate lyase superfamily protein
JGIIAPLE_02481 1.7e-10 ypbS S Protein of unknown function (DUF2533)
JGIIAPLE_02482 8e-15 S Sugar transport-related sRNA regulator N-term
JGIIAPLE_02483 1.3e-09 kdgT P The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system
JGIIAPLE_02487 1.6e-07 cymR K Transcriptional regulator
JGIIAPLE_02490 2.6e-09 motA N flagellar motor
JGIIAPLE_02497 9.3e-116
JGIIAPLE_02498 0.0 XK26_06135 M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
JGIIAPLE_02499 6.2e-145 S Phage tail protein
JGIIAPLE_02500 0.0 S Pfam Transposase IS66
JGIIAPLE_02501 6.4e-115
JGIIAPLE_02502 0.0 G Exopolysaccharide biosynthesis protein
JGIIAPLE_02503 6.5e-164
JGIIAPLE_02505 1.6e-186 3.5.1.28 M Ami_2
JGIIAPLE_02506 4.4e-32 bhlA S BhlA holin family
JGIIAPLE_02507 5.5e-40 S SPP1 phage holin
JGIIAPLE_02508 3.4e-74 O protein disulfide oxidoreductase activity
JGIIAPLE_02509 4.1e-242 M COG0463 Glycosyltransferases involved in cell wall biogenesis
JGIIAPLE_02510 1.2e-70 CO cell redox homeostasis
JGIIAPLE_02511 0.0 V Peptidase C39 family
JGIIAPLE_02514 1.9e-239 S impB/mucB/samB family C-terminal domain
JGIIAPLE_02515 5.8e-55 S YolD-like protein
JGIIAPLE_02516 2.5e-42
JGIIAPLE_02518 6.8e-09 S Domain of unknown function (DUF4879)
JGIIAPLE_02520 2.8e-99 J Acetyltransferase (GNAT) domain
JGIIAPLE_02521 3.2e-109 yokK S SMI1 / KNR4 family
JGIIAPLE_02522 1.9e-94 yokJ S SMI1 / KNR4 family (SUKH-1)
JGIIAPLE_02523 1.2e-302 UW nuclease activity
JGIIAPLE_02524 6.7e-92 yokH G SMI1 / KNR4 family
JGIIAPLE_02525 4.1e-203
JGIIAPLE_02526 3.3e-113 yokF 3.1.31.1 L RNA catabolic process
JGIIAPLE_02527 1.1e-83 S Bacterial PH domain
JGIIAPLE_02528 8.4e-156 aacC 2.3.1.81 V aminoglycoside
JGIIAPLE_02531 8.9e-95
JGIIAPLE_02532 1.6e-107
JGIIAPLE_02533 2.7e-307 yokA L Recombinase
JGIIAPLE_02534 1.4e-96 4.2.1.115 GM Polysaccharide biosynthesis protein
JGIIAPLE_02535 1.4e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
JGIIAPLE_02536 7e-103 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JGIIAPLE_02537 1.6e-70 ypoP K transcriptional
JGIIAPLE_02538 2.6e-223 mepA V MATE efflux family protein
JGIIAPLE_02539 5.5e-29 ypmT S Uncharacterized ympT
JGIIAPLE_02540 5e-99 ypmS S protein conserved in bacteria
JGIIAPLE_02541 1.3e-137 ypmR E GDSL-like Lipase/Acylhydrolase
JGIIAPLE_02542 3.2e-109 ypmQ S protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
JGIIAPLE_02543 3.1e-40 ypmP S Protein of unknown function (DUF2535)
JGIIAPLE_02544 4.4e-244 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JGIIAPLE_02545 1.6e-185 pspF K Transcriptional regulator
JGIIAPLE_02546 4.2e-110 hlyIII S protein, Hemolysin III
JGIIAPLE_02547 7.4e-112 ypkP 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
JGIIAPLE_02548 7.9e-96 folA 1.1.1.262, 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JGIIAPLE_02549 4.3e-157 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JGIIAPLE_02550 3.3e-92 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
JGIIAPLE_02551 7.8e-114 ypjP S YpjP-like protein
JGIIAPLE_02552 1.3e-145 ypiP 2.1.1.242 AJ Putative SAM-dependent methyltransferase
JGIIAPLE_02553 1.7e-75 yphP S Belongs to the UPF0403 family
JGIIAPLE_02554 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
JGIIAPLE_02555 1.8e-156 ypgR C COG0694 Thioredoxin-like proteins and domains
JGIIAPLE_02556 3.1e-110 ypgQ S phosphohydrolase
JGIIAPLE_02557 2.3e-89 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
JGIIAPLE_02558 7.3e-177 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JGIIAPLE_02559 2e-216 ugtP 2.4.1.315 GT28 M Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
JGIIAPLE_02560 7.9e-31 cspD K Cold-shock protein
JGIIAPLE_02561 3.8e-16 degR
JGIIAPLE_02562 8.1e-31 S Protein of unknown function (DUF2564)
JGIIAPLE_02563 2.6e-27 ypeQ S Zinc-finger
JGIIAPLE_02564 8.9e-127 ypeP 3.1.26.4 L COG0328 Ribonuclease HI
JGIIAPLE_02565 1.1e-121 ypdP S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JGIIAPLE_02566 8.5e-69 rnhA 3.1.26.4 L Ribonuclease
JGIIAPLE_02568 1.5e-166 polA 2.7.7.7 L 5'3' exonuclease
JGIIAPLE_02569 2e-07
JGIIAPLE_02570 1e-38 ypbS S Protein of unknown function (DUF2533)
JGIIAPLE_02571 0.0 ypbR S Dynamin family
JGIIAPLE_02572 5.1e-87 ypbQ S protein conserved in bacteria
JGIIAPLE_02573 4.4e-208 bcsA Q Naringenin-chalcone synthase
JGIIAPLE_02574 1.6e-228 pbuX F xanthine
JGIIAPLE_02575 8.8e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JGIIAPLE_02576 4.2e-294 ypwA 3.4.17.19 E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JGIIAPLE_02577 5e-171 kdgT P The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system
JGIIAPLE_02578 7e-104 eda 2.7.1.45, 4.1.2.14, 4.1.3.42 G 2-dehydro-3-deoxy-phosphogluconate aldolase
JGIIAPLE_02579 2.9e-187 kdgK 2.7.1.45 G COG0524 Sugar kinases, ribokinase family
JGIIAPLE_02580 3.9e-187 ptxS K transcriptional
JGIIAPLE_02581 1.7e-159 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
JGIIAPLE_02582 7.1e-133 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_02583 0.0 ypvA 3.6.4.12 KL COG1199 Rad3-related DNA helicases
JGIIAPLE_02585 5.4e-225 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
JGIIAPLE_02586 2.8e-45 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
JGIIAPLE_02587 3.3e-92 ypsA S Belongs to the UPF0398 family
JGIIAPLE_02588 1.3e-237 yprB L RNase_H superfamily
JGIIAPLE_02589 0.0 yprA L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
JGIIAPLE_02590 1.9e-81 ypqE 2.7.1.199 G COG2190 Phosphotransferase system IIA components
JGIIAPLE_02591 8.6e-72 hspX O Belongs to the small heat shock protein (HSP20) family
JGIIAPLE_02592 1.2e-48 yppG S YppG-like protein
JGIIAPLE_02594 2e-11 yppE S Bacterial domain of unknown function (DUF1798)
JGIIAPLE_02597 2.6e-188 yppC S Protein of unknown function (DUF2515)
JGIIAPLE_02598 1.2e-114 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
JGIIAPLE_02599 0.0 ponA 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 M penicillin-binding protein
JGIIAPLE_02600 4.7e-93 ypoC
JGIIAPLE_02601 2.2e-122 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JGIIAPLE_02602 5.7e-129 dnaD L DNA replication protein DnaD
JGIIAPLE_02603 5.8e-252 asnS 6.1.1.22 J asparaginyl-tRNA
JGIIAPLE_02604 1.5e-222 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
JGIIAPLE_02605 3.4e-80 ypmB S protein conserved in bacteria
JGIIAPLE_02606 6.7e-23 ypmA S Protein of unknown function (DUF4264)
JGIIAPLE_02607 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
JGIIAPLE_02608 3.5e-64 panD 4.1.1.11 H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
JGIIAPLE_02609 1.2e-157 panC 2.7.4.25, 6.3.2.1 H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JGIIAPLE_02610 1.4e-150 panB 2.1.2.11 H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
JGIIAPLE_02611 8.7e-184 birA 6.3.4.15 K Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
JGIIAPLE_02612 4.4e-222 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
JGIIAPLE_02613 3.7e-210 bshA GT4 M N-acetyl-alpha-D-glucosaminyl L-malate synthase
JGIIAPLE_02614 6.9e-130 bshB1 S proteins, LmbE homologs
JGIIAPLE_02615 6.5e-72 mgsA 2.7.1.24, 4.2.3.3 G methylglyoxal synthase
JGIIAPLE_02616 6.3e-148 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
JGIIAPLE_02617 3.1e-56 ypjD 2.5.1.19 S Nucleotide pyrophosphohydrolase
JGIIAPLE_02618 8.1e-157 ypjC S Uncharacterized protein conserved in bacteria (DUF2179)
JGIIAPLE_02619 6.1e-143 ypjB S sporulation protein
JGIIAPLE_02620 4.4e-98 ypjA S membrane
JGIIAPLE_02621 1.5e-146 qcrC C Menaquinol-cytochrome c reductase cytochrome b c subunit
JGIIAPLE_02622 5.2e-127 petB C COG1290 Cytochrome b subunit of the bc complex
JGIIAPLE_02623 9.3e-97 qcrA C Menaquinol-cytochrome c reductase
JGIIAPLE_02624 8.5e-78 ypiF S Protein of unknown function (DUF2487)
JGIIAPLE_02625 2.8e-99 ypiB S Belongs to the UPF0302 family
JGIIAPLE_02626 4.1e-234 S COG0457 FOG TPR repeat
JGIIAPLE_02627 8.9e-237 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
JGIIAPLE_02628 1.2e-208 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
JGIIAPLE_02629 2.9e-204 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JGIIAPLE_02630 5.5e-144 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
JGIIAPLE_02631 4e-231 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
JGIIAPLE_02632 6.5e-119 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
JGIIAPLE_02633 4.7e-113 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
JGIIAPLE_02634 1.2e-180 trpD 2.4.2.18, 4.1.3.27 E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JGIIAPLE_02635 6.6e-295 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JGIIAPLE_02636 1e-63 aroH 2.7.4.25, 5.4.99.5 E Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
JGIIAPLE_02637 8.1e-207 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JGIIAPLE_02638 5.5e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JGIIAPLE_02639 2.9e-142 cheR 2.1.1.80 NT COG1352 Methylase of chemotaxis methyl-accepting proteins
JGIIAPLE_02640 9.1e-80 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
JGIIAPLE_02641 4.5e-194 hepT 2.5.1.30, 2.5.1.83, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JGIIAPLE_02642 8.6e-133 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
JGIIAPLE_02643 5.6e-138 hepS 2.5.1.30 H Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
JGIIAPLE_02644 2.3e-34 mtrB K Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
JGIIAPLE_02645 7.1e-101 folE 3.5.4.16 H GTP cyclohydrolase
JGIIAPLE_02646 4.7e-42 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JGIIAPLE_02647 3.7e-279 spoIVA S ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JGIIAPLE_02648 5.4e-138 yphF
JGIIAPLE_02649 1.6e-18 yphE S Protein of unknown function (DUF2768)
JGIIAPLE_02650 2.3e-190 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
JGIIAPLE_02651 3.9e-248 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
JGIIAPLE_02652 1.6e-28 ypzH
JGIIAPLE_02653 2.5e-161 seaA S YIEGIA protein
JGIIAPLE_02654 1.3e-102 yphA
JGIIAPLE_02655 1e-07 S YpzI-like protein
JGIIAPLE_02656 4.1e-187 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
JGIIAPLE_02657 4.3e-206 rpsA 1.17.7.4 J Ribosomal protein S1
JGIIAPLE_02658 1.9e-113 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
JGIIAPLE_02659 1.8e-23 S Family of unknown function (DUF5359)
JGIIAPLE_02660 9.2e-113 ypfA M Flagellar protein YcgR
JGIIAPLE_02661 6.5e-254 hemX 2.1.1.107, 4.2.1.75 H sporulation protein
JGIIAPLE_02662 4.7e-155 sleB 3.5.1.28 M Spore cortex-lytic enzyme
JGIIAPLE_02663 1e-119 prsW S Involved in the degradation of specific anti-sigma factors
JGIIAPLE_02664 1.6e-174 ypdA 1.18.1.2, 1.19.1.1, 1.8.1.9 O COG0492 Thioredoxin reductase
JGIIAPLE_02665 2.6e-244 gudB 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
JGIIAPLE_02666 2.4e-104 mecB NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
JGIIAPLE_02667 1.8e-147 ypbG S Calcineurin-like phosphoesterase superfamily domain
JGIIAPLE_02668 2.8e-81 ypbF S Protein of unknown function (DUF2663)
JGIIAPLE_02669 4.6e-81 ypbE M Lysin motif
JGIIAPLE_02670 2.2e-100 ypbD S metal-dependent membrane protease
JGIIAPLE_02671 3.2e-286 recQ 3.6.4.12 L DNA helicase
JGIIAPLE_02672 3.8e-201 ypbB 5.1.3.1 S protein conserved in bacteria
JGIIAPLE_02673 4.7e-41 fer C Ferredoxin
JGIIAPLE_02674 5.8e-87 fmnP U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JGIIAPLE_02675 1.5e-294 serA 1.1.1.399, 1.1.1.95 E Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JGIIAPLE_02676 9e-136 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
JGIIAPLE_02677 6.8e-201 rsiX
JGIIAPLE_02678 2.6e-103 sigX K Belongs to the sigma-70 factor family. ECF subfamily
JGIIAPLE_02679 0.0 resE 2.7.13.3 T Histidine kinase
JGIIAPLE_02680 2.3e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_02681 3.9e-215 ccsA O 'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
JGIIAPLE_02682 0.0 ccs1 O COG1333 ResB protein required for cytochrome c biosynthesis
JGIIAPLE_02683 1.3e-99 resA CO Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
JGIIAPLE_02684 6.9e-133 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JGIIAPLE_02685 1.9e-87 spmB S Spore maturation protein
JGIIAPLE_02686 3.5e-103 spmA S Spore maturation protein
JGIIAPLE_02687 1.2e-213 dacB 3.4.16.4 M Belongs to the peptidase S11 family
JGIIAPLE_02688 4e-98 ypuI S Protein of unknown function (DUF3907)
JGIIAPLE_02689 1.9e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JGIIAPLE_02690 4.5e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JGIIAPLE_02691 4.1e-70 ypuF S Domain of unknown function (DUF309)
JGIIAPLE_02692 4.5e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JGIIAPLE_02693 3.9e-81 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
JGIIAPLE_02694 9.8e-230 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JGIIAPLE_02695 1.5e-115 ribE 2.5.1.9 H Riboflavin synthase
JGIIAPLE_02696 1.3e-204 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JGIIAPLE_02697 6e-55 ypuD
JGIIAPLE_02698 5.2e-101 sipT 3.4.21.89 U Belongs to the peptidase S26 family
JGIIAPLE_02699 2.3e-33 yhcC S nucleic-acid-binding protein containing a Zn-ribbon domain
JGIIAPLE_02700 1.5e-17 S SNARE associated Golgi protein
JGIIAPLE_02703 8e-81 ppiB 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JGIIAPLE_02704 1.3e-149 ypuA S Secreted protein
JGIIAPLE_02705 5.2e-256 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
JGIIAPLE_02706 1.4e-273 spoVAF EG Stage V sporulation protein AF
JGIIAPLE_02707 1.4e-110 spoVAEA S stage V sporulation protein
JGIIAPLE_02708 2.2e-57 spoVAEB S stage V sporulation protein
JGIIAPLE_02709 9e-192 spoVAD I Stage V sporulation protein AD
JGIIAPLE_02710 2.3e-78 spoVAC S stage V sporulation protein AC
JGIIAPLE_02711 1e-67 spoVAB S Stage V sporulation protein AB
JGIIAPLE_02712 7.4e-112 spoVAA S Stage V sporulation protein AA
JGIIAPLE_02713 2.4e-136 sigF K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JGIIAPLE_02714 1.8e-75 spoIIAB 2.7.11.1 F Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
JGIIAPLE_02715 3.9e-57 spoIIAA T Belongs to the anti-sigma-factor antagonist family
JGIIAPLE_02716 2.8e-213 dacF 3.4.16.4 M Belongs to the peptidase S11 family
JGIIAPLE_02717 1.7e-148 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JGIIAPLE_02718 1.2e-232 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
JGIIAPLE_02719 2.6e-166 xerD L recombinase XerD
JGIIAPLE_02720 3.7e-37 S Protein of unknown function (DUF4227)
JGIIAPLE_02721 2.4e-80 fur P Belongs to the Fur family
JGIIAPLE_02722 2.3e-108 spoIIM S Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
JGIIAPLE_02723 2e-32 yqkK
JGIIAPLE_02724 5.5e-242 mleA 1.1.1.38 C malic enzyme
JGIIAPLE_02725 3.1e-235 mleN C Na H antiporter
JGIIAPLE_02726 2.9e-268 aspA 4.2.1.2, 4.3.1.1 E Aspartate ammonia-lyase
JGIIAPLE_02727 3.6e-185 ansA 3.5.1.1 EJ L-asparaginase
JGIIAPLE_02728 4.5e-58 ansR K Transcriptional regulator
JGIIAPLE_02729 3e-223 yqxK 3.6.4.12 L DNA helicase
JGIIAPLE_02730 1.2e-92 nudF 3.6.1.13 L Belongs to the Nudix hydrolase family
JGIIAPLE_02732 4.4e-169 yqkF C oxidoreductases (related to aryl-alcohol dehydrogenases)
JGIIAPLE_02733 4e-14 yqkE S Protein of unknown function (DUF3886)
JGIIAPLE_02734 2.4e-175 yqkD S COG1073 Hydrolases of the alpha beta superfamily
JGIIAPLE_02735 9.4e-39 yqkC S Protein of unknown function (DUF2552)
JGIIAPLE_02736 2.8e-54 yqkB S Belongs to the HesB IscA family
JGIIAPLE_02737 4.7e-196 yqkA K GrpB protein
JGIIAPLE_02738 8e-60 yqjZ 2.3.1.128, 2.5.1.18 S enzyme involved in biosynthesis of extracellular polysaccharides
JGIIAPLE_02739 3.6e-87 yqjY K acetyltransferase
JGIIAPLE_02740 2.2e-49 S YolD-like protein
JGIIAPLE_02741 3.1e-239 polYB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JGIIAPLE_02743 5.2e-226 yqjV G Major Facilitator Superfamily
JGIIAPLE_02745 7.2e-73 yqjT 3.1.26.4 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JGIIAPLE_02746 2.4e-178 coaA 2.7.1.33 F Pantothenic acid kinase
JGIIAPLE_02747 2.4e-264 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
JGIIAPLE_02748 3.5e-143 yqjQ S Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_02749 3.4e-180 yqjP S COG0491 Zn-dependent hydrolases, including glyoxylases
JGIIAPLE_02750 8.6e-148 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JGIIAPLE_02751 0.0 rocB E arginine degradation protein
JGIIAPLE_02752 1.4e-192 namA 1.6.99.1 C Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
JGIIAPLE_02753 9.6e-146 yqjL S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
JGIIAPLE_02754 2.9e-173 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
JGIIAPLE_02755 1.6e-290 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JGIIAPLE_02756 6.9e-267 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JGIIAPLE_02757 7.3e-236 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JGIIAPLE_02758 4.5e-24 yqzJ
JGIIAPLE_02759 5.7e-144 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JGIIAPLE_02760 3.6e-142 yqjF S Uncharacterized conserved protein (COG2071)
JGIIAPLE_02761 1.6e-202 yqjE 3.4.11.4 E COG2195 Di- and tripeptidases
JGIIAPLE_02762 4.4e-291 mmdA 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
JGIIAPLE_02763 2.2e-75 mce 4.4.1.5, 5.1.99.1, 5.4.99.2 E COG0346 Lactoylglutathione lyase and related lyases
JGIIAPLE_02765 1.4e-98 yqjB S protein conserved in bacteria
JGIIAPLE_02766 1.1e-175 yqjA S Putative aromatic acid exporter C-terminal domain
JGIIAPLE_02767 2e-129 artM 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
JGIIAPLE_02768 6.2e-109 artQ E COG0765 ABC-type amino acid transport system, permease component
JGIIAPLE_02769 6.3e-137 artP ET Belongs to the bacterial solute-binding protein 3 family
JGIIAPLE_02770 9.3e-77 yqiW S Belongs to the UPF0403 family
JGIIAPLE_02771 8.8e-167 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
JGIIAPLE_02772 7.9e-208 norA EGP Major facilitator Superfamily
JGIIAPLE_02773 2.6e-152 bmrR K helix_turn_helix, mercury resistance
JGIIAPLE_02774 3.5e-233 bfmBB 2.3.1.168, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
JGIIAPLE_02775 1.8e-184 bfmBAB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
JGIIAPLE_02776 1.9e-186 bfmBAA 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
JGIIAPLE_02777 3.4e-269 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
JGIIAPLE_02778 1.2e-202 buk 2.7.2.7 C Belongs to the acetokinase family
JGIIAPLE_02779 2.2e-207 ldh 1.4.1.9 E Belongs to the Glu Leu Phe Val dehydrogenases family
JGIIAPLE_02780 7.1e-156 pta 2.3.1.19, 2.3.1.8 C phosphate butyryltransferase
JGIIAPLE_02781 0.0 bkdR 2.7.13.3 KT Transcriptional regulator
JGIIAPLE_02782 4e-34 yqzF S Protein of unknown function (DUF2627)
JGIIAPLE_02783 7.1e-164 prpB 4.1.3.30 G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JGIIAPLE_02784 5.7e-277 prpD 4.2.1.79 S 2-methylcitrate dehydratase
JGIIAPLE_02785 8.1e-210 prpC 2.3.3.1, 2.3.3.5 C Belongs to the citrate synthase family
JGIIAPLE_02786 1.8e-212 mmgC I acyl-CoA dehydrogenase
JGIIAPLE_02787 4.7e-157 hbdA 1.1.1.157 I Dehydrogenase
JGIIAPLE_02788 1.2e-219 mmgA 2.3.1.9 I Belongs to the thiolase family
JGIIAPLE_02789 1.8e-133 yqiK 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
JGIIAPLE_02790 5.4e-107 amiC 3.5.1.28 M Cell wall hydrolase autolysin
JGIIAPLE_02791 5.9e-27
JGIIAPLE_02792 1.3e-215 yqiG C COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
JGIIAPLE_02794 3.2e-144 KT May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
JGIIAPLE_02795 1.2e-238 rseP 3.4.21.116 M Stage IV sporulation protein B
JGIIAPLE_02796 0.0 recN L May be involved in recombinational repair of damaged DNA
JGIIAPLE_02797 1.7e-78 argR K Regulates arginine biosynthesis genes
JGIIAPLE_02798 6.6e-156 rrmJ 2.1.1.226, 2.1.1.227 J rRNA methylase
JGIIAPLE_02799 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JGIIAPLE_02800 7.7e-163 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JGIIAPLE_02801 5.8e-39 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JGIIAPLE_02802 2.2e-246 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JGIIAPLE_02803 1e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JGIIAPLE_02804 1.9e-65 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JGIIAPLE_02805 2.1e-67 yqhY S protein conserved in bacteria
JGIIAPLE_02806 1.5e-255 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
JGIIAPLE_02807 1.5e-64 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
JGIIAPLE_02808 9.9e-91 spoIIIAH S SpoIIIAH-like protein
JGIIAPLE_02809 6.9e-103 spoIIIAG S stage III sporulation protein AG
JGIIAPLE_02810 3.1e-102 spoIIIAF S Stage III sporulation protein AF (Spore_III_AF)
JGIIAPLE_02811 1.3e-197 spoIIIAE S stage III sporulation protein AE
JGIIAPLE_02812 2.3e-58 spoIIIAD S Stage III sporulation protein AD
JGIIAPLE_02813 7.6e-29 spoIIIAC S stage III sporulation protein AC
JGIIAPLE_02814 2.9e-85 spoIIIAB S Stage III sporulation protein
JGIIAPLE_02815 1.2e-171 spoIIIAA S stage III sporulation protein AA
JGIIAPLE_02816 7.9e-37 yqhV S Protein of unknown function (DUF2619)
JGIIAPLE_02817 5.4e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JGIIAPLE_02818 8.9e-174 yqhT 3.4.11.9, 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
JGIIAPLE_02819 1.5e-77 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
JGIIAPLE_02820 2.3e-93 yqhR S Conserved membrane protein YqhR
JGIIAPLE_02821 9.4e-175 yqhQ S Protein of unknown function (DUF1385)
JGIIAPLE_02822 2.2e-61 yqhP
JGIIAPLE_02823 8.1e-165 yqhO S esterase of the alpha-beta hydrolase superfamily
JGIIAPLE_02824 9.4e-74 mntR K Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
JGIIAPLE_02825 5.2e-161 lipM 6.3.1.20 H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
JGIIAPLE_02826 2.3e-63 yqhL P COG0607 Rhodanese-related sulfurtransferase
JGIIAPLE_02827 2.8e-287 gcvPB 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JGIIAPLE_02828 3.4e-255 gcvPA 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JGIIAPLE_02829 9.6e-208 gcvT 1.4.4.2, 2.1.2.10 E The glycine cleavage system catalyzes the degradation of glycine
JGIIAPLE_02830 0.0 yqhH L COG0553 Superfamily II DNA RNA helicases, SNF2 family
JGIIAPLE_02831 2.5e-152 yqhG S Bacterial protein YqhG of unknown function
JGIIAPLE_02832 1.2e-24 sinI S Anti-repressor SinI
JGIIAPLE_02833 1e-54 sinR K transcriptional
JGIIAPLE_02834 2.3e-142 tasA S Cell division protein FtsN
JGIIAPLE_02835 6.7e-59 sipW 3.4.21.89 U Signal peptidase
JGIIAPLE_02836 2.1e-116 yqxM
JGIIAPLE_02837 7.3e-54 yqzG S Protein of unknown function (DUF3889)
JGIIAPLE_02838 1.4e-26 yqzE S YqzE-like protein
JGIIAPLE_02839 3.7e-42 S ComG operon protein 7
JGIIAPLE_02840 5.5e-49 comGF U Putative Competence protein ComGF
JGIIAPLE_02841 1.1e-59 comGE
JGIIAPLE_02842 4.4e-71 gspH NU protein transport across the cell outer membrane
JGIIAPLE_02843 1.4e-47 comGC U Required for transformation and DNA binding
JGIIAPLE_02844 1.6e-175 comGB NU COG1459 Type II secretory pathway, component PulF
JGIIAPLE_02845 3.9e-201 comGA NU COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JGIIAPLE_02847 7.2e-175 corA P Mg2 transporter protein
JGIIAPLE_02848 5.2e-240 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
JGIIAPLE_02849 1.7e-151 yqhA T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
JGIIAPLE_02851 2.7e-64 yqgZ 1.20.4.1 P Belongs to the ArsC family
JGIIAPLE_02852 1.8e-37 yqgY S Protein of unknown function (DUF2626)
JGIIAPLE_02853 1.9e-123 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
JGIIAPLE_02854 8.9e-23 yqgW S Protein of unknown function (DUF2759)
JGIIAPLE_02855 6.9e-50 yqgV S Thiamine-binding protein
JGIIAPLE_02856 2.7e-199 yqgU
JGIIAPLE_02857 1.4e-222 yqgT 3.4.19.11 E Gamma-D-glutamyl-L-diamino acid endopeptidase
JGIIAPLE_02858 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
JGIIAPLE_02859 5.2e-181 glcK 2.7.1.2 G Glucokinase
JGIIAPLE_02860 3.1e-33 yqgQ S Protein conserved in bacteria
JGIIAPLE_02861 1.4e-268 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
JGIIAPLE_02862 2.5e-09 yqgO
JGIIAPLE_02863 2.7e-105 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JGIIAPLE_02864 9.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
JGIIAPLE_02865 3.2e-203 yqgM 2.4.1.11, 2.4.1.18 GH57,GT4 M Glycosyl transferases group 1
JGIIAPLE_02867 9.2e-51 yqzD
JGIIAPLE_02868 1.9e-75 yqzC S YceG-like family
JGIIAPLE_02869 9.8e-146 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JGIIAPLE_02870 6.4e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JGIIAPLE_02871 4.4e-158 pstA P Phosphate transport system permease
JGIIAPLE_02872 1.3e-160 pstC P probably responsible for the translocation of the substrate across the membrane
JGIIAPLE_02873 5.3e-151 pstS P Phosphate
JGIIAPLE_02874 0.0 pbpA 3.4.16.4 M penicillin-binding protein
JGIIAPLE_02875 2.5e-231 yqgE EGP Major facilitator superfamily
JGIIAPLE_02876 6.3e-116 sodA 1.15.1.1 P radicals which are normally produced within the cells and which are toxic to biological systems
JGIIAPLE_02877 4e-73 yqgC S protein conserved in bacteria
JGIIAPLE_02878 8.5e-134 yqgB S Protein of unknown function (DUF1189)
JGIIAPLE_02879 2.2e-75 yqgA
JGIIAPLE_02880 5.2e-47 yqfZ M LysM domain
JGIIAPLE_02881 2.8e-202 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JGIIAPLE_02882 4.3e-62 yqfX S membrane
JGIIAPLE_02883 1.2e-108 yqfW S Belongs to the 5'(3')-deoxyribonucleotidase family
JGIIAPLE_02884 1.9e-77 zur P Belongs to the Fur family
JGIIAPLE_02885 1.6e-157 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
JGIIAPLE_02886 2.1e-36 yqfT S Protein of unknown function (DUF2624)
JGIIAPLE_02887 8.8e-167 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JGIIAPLE_02888 1.7e-243 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
JGIIAPLE_02889 2.9e-14 yqfQ S YqfQ-like protein
JGIIAPLE_02890 2.6e-177 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JGIIAPLE_02891 5.1e-212 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JGIIAPLE_02892 6.1e-117 trmK 2.1.1.217 S SAM-dependent methyltransferase
JGIIAPLE_02893 1.6e-61 cccA C COG2010 Cytochrome c, mono- and diheme variants
JGIIAPLE_02894 1.2e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JGIIAPLE_02895 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JGIIAPLE_02896 4.5e-88 yaiI S Belongs to the UPF0178 family
JGIIAPLE_02897 5.8e-149 yqfL 2.7.11.33, 2.7.4.28 S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
JGIIAPLE_02898 4.5e-112 ccpN K CBS domain
JGIIAPLE_02899 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
JGIIAPLE_02900 3.3e-174 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
JGIIAPLE_02901 4.8e-145 recO L Involved in DNA repair and RecF pathway recombination
JGIIAPLE_02902 8.4e-19 S YqzL-like protein
JGIIAPLE_02903 3.1e-167 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JGIIAPLE_02904 7.1e-71 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
JGIIAPLE_02905 1.6e-61 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
JGIIAPLE_02906 5.1e-81 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JGIIAPLE_02907 0.0 yqfF S membrane-associated HD superfamily hydrolase
JGIIAPLE_02909 1.1e-175 phoH T Phosphate starvation-inducible protein PhoH
JGIIAPLE_02910 1.5e-185 yqfD 3.1.3.102, 3.1.3.104 S Stage IV sporulation
JGIIAPLE_02911 2.7e-45 yqfC S sporulation protein YqfC
JGIIAPLE_02912 6e-25 yqfB
JGIIAPLE_02913 4.3e-122 yqfA S UPF0365 protein
JGIIAPLE_02914 5.4e-229 yqeZ O COG1030 Membrane-bound serine protease (ClpP class)
JGIIAPLE_02915 2.5e-61 yqeY S Yqey-like protein
JGIIAPLE_02916 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
JGIIAPLE_02917 1.6e-158 yqeW P COG1283 Na phosphate symporter
JGIIAPLE_02918 2.1e-260 yqeV 2.8.4.5 J ribosomal protein S12 methylthiotransferase
JGIIAPLE_02919 1.4e-141 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
JGIIAPLE_02920 5.4e-175 prmA J Methylates ribosomal protein L11
JGIIAPLE_02921 4.2e-182 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JGIIAPLE_02922 0.0 dnaK O Heat shock 70 kDa protein
JGIIAPLE_02923 3.8e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JGIIAPLE_02924 4.7e-188 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JGIIAPLE_02925 4.8e-218 hemN H Involved in the biosynthesis of porphyrin-containing compound
JGIIAPLE_02926 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JGIIAPLE_02927 1e-54 yqxA S Protein of unknown function (DUF3679)
JGIIAPLE_02928 6.9e-223 spoIIP M stage II sporulation protein P
JGIIAPLE_02929 1.3e-204 gpr 3.4.24.78 C Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JGIIAPLE_02930 9.7e-37 rpsT J Binds directly to 16S ribosomal RNA
JGIIAPLE_02931 1.1e-189 holA 2.7.7.7 L DNA polymerase III delta subunit
JGIIAPLE_02932 4.1e-15 S YqzM-like protein
JGIIAPLE_02933 0.0 comEC S Competence protein ComEC
JGIIAPLE_02934 2.1e-105 comEB 3.5.4.12 F ComE operon protein 2
JGIIAPLE_02935 3e-105 wza L COG1555 DNA uptake protein and related DNA-binding proteins
JGIIAPLE_02936 8.4e-148 comER E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JGIIAPLE_02937 2.9e-139 yqeM Q Methyltransferase
JGIIAPLE_02938 6.9e-62 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JGIIAPLE_02939 7.4e-103 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
JGIIAPLE_02940 2.7e-108 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JGIIAPLE_02941 2.1e-45 yhbY J RNA-binding protein containing KH domain, possibly ribosomal protein
JGIIAPLE_02942 2.7e-157 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JGIIAPLE_02943 9.1e-214 yqeH S In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
JGIIAPLE_02944 5.3e-95 yqeG S hydrolase of the HAD superfamily
JGIIAPLE_02946 6.2e-142 yqeF E GDSL-like Lipase/Acylhydrolase
JGIIAPLE_02947 2.1e-137 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
JGIIAPLE_02948 4.7e-106 yqeD S SNARE associated Golgi protein
JGIIAPLE_02949 1.2e-171 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase
JGIIAPLE_02950 2.3e-133 yqeB
JGIIAPLE_02951 1.1e-74 nucB M Deoxyribonuclease NucA/NucB
JGIIAPLE_02952 3.3e-56 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JGIIAPLE_02953 1.4e-281 cisA2 L Recombinase
JGIIAPLE_02954 1.8e-77 arsC 1.20.4.1 T Catalyzes the reduction of arsenate As(V) to arsenite As(III)
JGIIAPLE_02955 6e-183 arsB 1.20.4.1 P Arsenic resistance protein
JGIIAPLE_02956 2.8e-73 cadI 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JGIIAPLE_02957 1.6e-54 arsR K ArsR family transcriptional regulator
JGIIAPLE_02958 1.1e-152 yqcI S YqcI/YcgG family
JGIIAPLE_02959 1.6e-96 S Tetratricopeptide repeat
JGIIAPLE_02962 3.8e-277 A Pre-toxin TG
JGIIAPLE_02963 1.1e-104 S Suppressor of fused protein (SUFU)
JGIIAPLE_02965 5e-60
JGIIAPLE_02967 1.1e-144 xlyA 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
JGIIAPLE_02968 2.6e-68 S Bacteriophage holin family
JGIIAPLE_02969 4.8e-165 xepA
JGIIAPLE_02970 1.3e-23
JGIIAPLE_02971 4.1e-56 xkdW S XkdW protein
JGIIAPLE_02972 2e-221
JGIIAPLE_02973 9.6e-40
JGIIAPLE_02974 9.9e-103 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
JGIIAPLE_02975 6e-191 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
JGIIAPLE_02976 9.6e-71 xkdS S Protein of unknown function (DUF2634)
JGIIAPLE_02977 1.8e-38 xkdR S Protein of unknown function (DUF2577)
JGIIAPLE_02978 2.4e-181 yqbQ 3.2.1.96 G NLP P60 protein
JGIIAPLE_02979 9e-114 xkdP S Lysin motif
JGIIAPLE_02980 0.0 xkdO L Transglycosylase SLT domain
JGIIAPLE_02981 1.8e-67 S Phage XkdN-like tail assembly chaperone protein, TAC
JGIIAPLE_02983 3.6e-76 xkdM S Phage tail tube protein
JGIIAPLE_02984 5.5e-256 xkdK S Phage tail sheath C-terminal domain
JGIIAPLE_02985 3.2e-26
JGIIAPLE_02986 1.4e-77
JGIIAPLE_02987 4.3e-94 S Bacteriophage HK97-gp10, putative tail-component
JGIIAPLE_02988 6.7e-65 yqbH S Domain of unknown function (DUF3599)
JGIIAPLE_02989 2.1e-67 S Protein of unknown function (DUF3199)
JGIIAPLE_02990 3.6e-51 S YqbF, hypothetical protein domain
JGIIAPLE_02991 1.9e-167 xkdG S Phage capsid family
JGIIAPLE_02992 5.1e-128 yqbD 2.1.1.72 L Putative phage serine protease XkdF
JGIIAPLE_02993 2e-115
JGIIAPLE_02994 5.7e-169 S Phage Mu protein F like protein
JGIIAPLE_02995 5.9e-296 yqbA S portal protein
JGIIAPLE_02996 2.4e-253 S phage terminase, large subunit
JGIIAPLE_02997 6.3e-107 yqaS L DNA packaging
JGIIAPLE_02999 6.5e-81 L Transposase
JGIIAPLE_03000 1.6e-166
JGIIAPLE_03001 2.1e-31 yqaO S Phage-like element PBSX protein XtrA
JGIIAPLE_03002 7.2e-74 rusA L Endodeoxyribonuclease RusA
JGIIAPLE_03004 5.9e-168 xkdC L IstB-like ATP binding protein
JGIIAPLE_03005 4.7e-123 3.1.3.16 L DnaD domain protein
JGIIAPLE_03006 2.5e-155 recT L RecT family
JGIIAPLE_03007 1.5e-180 yqaJ L YqaJ-like viral recombinase domain
JGIIAPLE_03011 1.2e-103
JGIIAPLE_03013 6.5e-37 K Helix-turn-helix XRE-family like proteins
JGIIAPLE_03014 1.1e-56 K sequence-specific DNA binding
JGIIAPLE_03016 1e-101 adk 2.7.4.3 F adenylate kinase activity
JGIIAPLE_03017 1.4e-100 yqaB E IrrE N-terminal-like domain
JGIIAPLE_03018 2.2e-61 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JGIIAPLE_03019 2e-68 psiE S Protein PsiE homolog
JGIIAPLE_03020 9e-237 yrkQ T Histidine kinase
JGIIAPLE_03021 1.1e-127 T Transcriptional regulator
JGIIAPLE_03022 8.2e-224 yrkO P Protein of unknown function (DUF418)
JGIIAPLE_03023 6e-105 yrkN K Acetyltransferase (GNAT) family
JGIIAPLE_03024 1.5e-97 ywrO S Flavodoxin-like fold
JGIIAPLE_03025 2.8e-79 S Protein of unknown function with HXXEE motif
JGIIAPLE_03026 4.3e-117 yrkJ S membrane transporter protein
JGIIAPLE_03027 2.4e-36 yrkI O Belongs to the sulfur carrier protein TusA family
JGIIAPLE_03028 2.3e-212 yrkH P Rhodanese Homology Domain
JGIIAPLE_03029 1.7e-99 yrkF OP Belongs to the sulfur carrier protein TusA family
JGIIAPLE_03030 5.1e-84 yrkE O DsrE/DsrF/DrsH-like family
JGIIAPLE_03031 7.8e-39 yrkD S protein conserved in bacteria
JGIIAPLE_03032 2.6e-108 yrkC G Cupin domain
JGIIAPLE_03033 4.8e-151 bltR K helix_turn_helix, mercury resistance
JGIIAPLE_03034 3.5e-211 blt EGP Major facilitator Superfamily
JGIIAPLE_03035 1.4e-83 bltD 2.3.1.57 K FR47-like protein
JGIIAPLE_03036 4.5e-236 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
JGIIAPLE_03037 2.1e-17 S YrzO-like protein
JGIIAPLE_03038 1.7e-171 yrdR EG EamA-like transporter family
JGIIAPLE_03039 5.9e-160 yrdQ K Transcriptional regulator
JGIIAPLE_03040 2e-199 trkA P Oxidoreductase
JGIIAPLE_03041 3.5e-158 czcD P COG1230 Co Zn Cd efflux system component
JGIIAPLE_03042 1.3e-66 yodA S tautomerase
JGIIAPLE_03043 7.7e-163 gltR K LysR substrate binding domain
JGIIAPLE_03045 1.5e-231 brnQ E Component of the transport system for branched-chain amino acids
JGIIAPLE_03046 2.5e-50 azlD E Branched-chain amino acid transport protein (AzlD)
JGIIAPLE_03047 3.3e-138 azlC E AzlC protein
JGIIAPLE_03048 2.2e-79 bkdR K helix_turn_helix ASNC type
JGIIAPLE_03049 4.1e-46 yrdF K ribonuclease inhibitor
JGIIAPLE_03050 4.1e-231 cypA C Cytochrome P450
JGIIAPLE_03052 3.1e-101 yrdC 3.5.1.19 Q Isochorismatase family
JGIIAPLE_03053 1.9e-57 S Protein of unknown function (DUF2568)
JGIIAPLE_03054 1.2e-91 yrdA S DinB family
JGIIAPLE_03055 7.6e-168 aadK G Streptomycin adenylyltransferase
JGIIAPLE_03056 1.5e-194 yrpB 1.13.12.16 S COG2070 Dioxygenases related to 2-nitropropane dioxygenase
JGIIAPLE_03057 7.4e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
JGIIAPLE_03058 3e-125 yrpD S Domain of unknown function, YrpD
JGIIAPLE_03060 5.4e-117 adcA S ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
JGIIAPLE_03061 6.3e-96 sigZ K Belongs to the sigma-70 factor family. ECF subfamily
JGIIAPLE_03062 4.5e-188 yrpG C Aldo/keto reductase family
JGIIAPLE_03063 9.5e-226 yraO C Citrate transporter
JGIIAPLE_03064 1.2e-163 yraN K Transcriptional regulator
JGIIAPLE_03065 2.4e-206 yraM S PrpF protein
JGIIAPLE_03067 2.7e-157 csn 3.2.1.132 M Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
JGIIAPLE_03068 7.6e-42 yraL S COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JGIIAPLE_03069 3.2e-155 S Alpha beta hydrolase
JGIIAPLE_03070 1.7e-60 T sh3 domain protein
JGIIAPLE_03071 2.4e-61 T sh3 domain protein
JGIIAPLE_03072 1.3e-66 E Glyoxalase-like domain
JGIIAPLE_03073 5.3e-37 yraG
JGIIAPLE_03074 6.4e-63 yraF M Spore coat protein
JGIIAPLE_03075 2.9e-223 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284, 1.2.1.46 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
JGIIAPLE_03076 2.6e-26 yraE
JGIIAPLE_03077 1.1e-49 yraD M Spore coat protein
JGIIAPLE_03078 4.3e-47 yraB K helix_turn_helix, mercury resistance
JGIIAPLE_03079 3.2e-29 yphJ 4.1.1.44 S peroxiredoxin activity
JGIIAPLE_03080 1.9e-200 adhA 1.1.1.1 C alcohol dehydrogenase
JGIIAPLE_03081 5e-90 yhbO 1.11.1.6, 3.5.1.124 S protease
JGIIAPLE_03082 0.0 sacC 3.2.1.26, 3.2.1.65, 3.2.1.80 GH32 G Belongs to the glycosyl hydrolase 32 family
JGIIAPLE_03083 1.5e-152 manZ G COG3716 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IID
JGIIAPLE_03084 4.9e-116 manY G COG3715 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IIC
JGIIAPLE_03085 8.2e-82 levE 2.7.1.202 G PTS system mannose fructose sorbose family
JGIIAPLE_03086 3.9e-75 levD 2.7.1.202 G PTS system fructose IIA component
JGIIAPLE_03087 0.0 levR K PTS system fructose IIA component
JGIIAPLE_03088 1.6e-255 cycA E COG1113 Gamma-aminobutyrate permease and related permeases
JGIIAPLE_03089 3.6e-106 yrhP E LysE type translocator
JGIIAPLE_03090 1.1e-150 yrhO K Archaeal transcriptional regulator TrmB
JGIIAPLE_03091 4.3e-86 sigV K Belongs to the sigma-70 factor family. ECF subfamily
JGIIAPLE_03092 1.7e-151 rsiV S Protein of unknown function (DUF3298)
JGIIAPLE_03093 0.0 yrhL I Acyltransferase family
JGIIAPLE_03094 1.5e-46 yrhK S YrhK-like protein
JGIIAPLE_03095 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
JGIIAPLE_03096 4.8e-105 Z012_03230 K Tetracycline repressor, C-terminal all-alpha domain
JGIIAPLE_03097 4.5e-97 yrhH Q methyltransferase
JGIIAPLE_03100 1.8e-142 focA P Formate nitrite
JGIIAPLE_03101 7.8e-61 yrhF S Uncharacterized conserved protein (DUF2294)
JGIIAPLE_03102 0.0 fdhA 1.17.1.10, 1.17.1.9 C formate dehydrogenase (NAD+) activity
JGIIAPLE_03103 1.4e-78 yrhD S Protein of unknown function (DUF1641)
JGIIAPLE_03104 4.6e-35 yrhC S YrhC-like protein
JGIIAPLE_03105 2.6e-211 mccB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
JGIIAPLE_03106 1.2e-171 mccA 2.5.1.134, 2.5.1.47 E Cysteine synthase
JGIIAPLE_03107 4.2e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JGIIAPLE_03108 1.2e-120 yrrT 4.4.1.21 Q Could be a S-adenosyl-L-methionine-dependent methyltransferase
JGIIAPLE_03109 7e-27 yrzA S Protein of unknown function (DUF2536)
JGIIAPLE_03110 4.2e-63 yrrS S Protein of unknown function (DUF1510)
JGIIAPLE_03111 0.0 pbpI 3.4.16.4 M Penicillin-binding Protein
JGIIAPLE_03112 2.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JGIIAPLE_03113 4.7e-114 udk 2.7.1.48 F Cytidine monophosphokinase
JGIIAPLE_03114 2.7e-246 yegQ O COG0826 Collagenase and related proteases
JGIIAPLE_03115 7.8e-174 yegQ O Peptidase U32
JGIIAPLE_03116 5.9e-120 yrrM 2.1.1.104 S O-methyltransferase
JGIIAPLE_03117 1.6e-183 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JGIIAPLE_03118 1.2e-45 yrzB S Belongs to the UPF0473 family
JGIIAPLE_03119 2.1e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JGIIAPLE_03120 1.7e-41 yrzL S Belongs to the UPF0297 family
JGIIAPLE_03121 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JGIIAPLE_03122 2.7e-170 yrrI S AI-2E family transporter
JGIIAPLE_03123 1.3e-131 glnQ 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
JGIIAPLE_03124 5.1e-145 glnH ET Belongs to the bacterial solute-binding protein 3 family
JGIIAPLE_03125 3.6e-109 gluC P ABC transporter
JGIIAPLE_03126 7.6e-107 glnP P ABC transporter
JGIIAPLE_03127 8e-08 S Protein of unknown function (DUF3918)
JGIIAPLE_03128 9.8e-31 yrzR
JGIIAPLE_03129 1.8e-83 yrrD S protein conserved in bacteria
JGIIAPLE_03130 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
JGIIAPLE_03131 1.4e-15 S COG0457 FOG TPR repeat
JGIIAPLE_03132 2.3e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
JGIIAPLE_03133 4.7e-213 iscS 2.8.1.7 E Cysteine desulfurase
JGIIAPLE_03134 1.2e-70 cymR K Transcriptional regulator
JGIIAPLE_03135 2e-236 rarA L COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
JGIIAPLE_03136 2.8e-137 yrvM H COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
JGIIAPLE_03137 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JGIIAPLE_03138 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
JGIIAPLE_03140 3.9e-263 lytH 3.5.1.28 M COG3103 SH3 domain protein
JGIIAPLE_03141 1.9e-68 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JGIIAPLE_03142 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JGIIAPLE_03143 5.9e-91 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JGIIAPLE_03144 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
JGIIAPLE_03145 1.3e-48 yrvD S Lipopolysaccharide assembly protein A domain
JGIIAPLE_03146 1.7e-87 yrvC P regulatory, ligand-binding protein related to C-terminal domains of K channels
JGIIAPLE_03147 0.0 secF U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JGIIAPLE_03148 9.4e-49 yrzD S Post-transcriptional regulator
JGIIAPLE_03149 5.7e-270 spoVB S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
JGIIAPLE_03150 2.2e-114 yrbG S membrane
JGIIAPLE_03151 1.2e-74 yrzE S Protein of unknown function (DUF3792)
JGIIAPLE_03152 1.1e-38 yajC U Preprotein translocase subunit YajC
JGIIAPLE_03153 5.2e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
JGIIAPLE_03154 2e-194 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JGIIAPLE_03155 2.6e-18 yrzS S Protein of unknown function (DUF2905)
JGIIAPLE_03156 6.6e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JGIIAPLE_03157 1.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JGIIAPLE_03158 4.8e-93 bofC S BofC C-terminal domain
JGIIAPLE_03159 5.3e-253 csbX EGP Major facilitator Superfamily
JGIIAPLE_03160 1.3e-193 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
JGIIAPLE_03161 6.5e-119 yrzF T serine threonine protein kinase
JGIIAPLE_03163 2.6e-35 S Family of unknown function (DUF5412)
JGIIAPLE_03165 1.8e-262 alsT E Sodium alanine symporter
JGIIAPLE_03166 1.9e-127 yebC K transcriptional regulatory protein
JGIIAPLE_03167 3.8e-49 S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
JGIIAPLE_03168 9.8e-158 safA M spore coat assembly protein SafA
JGIIAPLE_03169 2.8e-215 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JGIIAPLE_03170 5.4e-161 nadC 1.4.3.16, 2.4.2.19 H Belongs to the NadC ModD family
JGIIAPLE_03171 2.7e-307 nadB 1.3.5.4, 1.4.3.16 H Catalyzes the oxidation of L-aspartate to iminoaspartate
JGIIAPLE_03172 1.2e-230 nifS 2.8.1.7 E Cysteine desulfurase
JGIIAPLE_03173 3.6e-94 niaR S small molecule binding protein (contains 3H domain)
JGIIAPLE_03174 3.4e-163 pheA 4.2.1.51 E Prephenate dehydratase
JGIIAPLE_03175 2.2e-73 pheB 5.4.99.5 S Belongs to the UPF0735 family
JGIIAPLE_03176 1.5e-231 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JGIIAPLE_03177 1.5e-106 spo0B T Sporulation initiation phospho-transferase B, C-terminal
JGIIAPLE_03178 2.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
JGIIAPLE_03179 4.1e-56 ysxB J ribosomal protein
JGIIAPLE_03180 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
JGIIAPLE_03181 9.2e-161 spoIVFB S Stage IV sporulation protein
JGIIAPLE_03182 3.8e-145 spoIVFA M COG0739 Membrane proteins related to metalloendopeptidases
JGIIAPLE_03183 2.5e-144 minD D Belongs to the ParA family
JGIIAPLE_03184 1.4e-108 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
JGIIAPLE_03185 1.4e-84 mreD M shape-determining protein
JGIIAPLE_03186 2.8e-157 mreC M Involved in formation and maintenance of cell shape
JGIIAPLE_03187 1.8e-184 mreB D Rod shape-determining protein MreB
JGIIAPLE_03188 5.9e-126 radC E Belongs to the UPF0758 family
JGIIAPLE_03189 2.8e-102 maf D septum formation protein Maf
JGIIAPLE_03190 1.1e-168 spoIIB S Sporulation related domain
JGIIAPLE_03191 6.6e-85 comC 3.4.23.43 NOU COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
JGIIAPLE_03192 4.3e-247 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
JGIIAPLE_03193 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JGIIAPLE_03194 1.6e-25
JGIIAPLE_03195 1.6e-199 ysxE S A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JGIIAPLE_03196 1.9e-226 spoVID M stage VI sporulation protein D
JGIIAPLE_03197 4.6e-249 hemL 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
JGIIAPLE_03198 5.6e-183 hemB 4.2.1.24 H Belongs to the ALAD family
JGIIAPLE_03199 4.4e-146 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
JGIIAPLE_03200 3e-173 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
JGIIAPLE_03201 3.6e-146 hemX O cytochrome C
JGIIAPLE_03202 3.5e-247 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
JGIIAPLE_03203 1.4e-89 ysxD
JGIIAPLE_03204 1.2e-106 engB D Necessary for normal cell division and for the maintenance of normal septation
JGIIAPLE_03205 0.0 lon 3.4.21.53 O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JGIIAPLE_03206 2.3e-311 lonB 2.7.7.7, 3.4.21.53 LO Belongs to the peptidase S16 family
JGIIAPLE_03207 3.4e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JGIIAPLE_03208 8.3e-227 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JGIIAPLE_03209 2.3e-187 ysoA H Tetratricopeptide repeat
JGIIAPLE_03210 8.1e-116 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JGIIAPLE_03211 1.7e-276 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JGIIAPLE_03212 3.3e-200 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
JGIIAPLE_03213 4e-292 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JGIIAPLE_03214 3.1e-192 ilvC 1.1.1.86 EH Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JGIIAPLE_03215 3.2e-84 ilvN 2.2.1.6 E Acetolactate synthase
JGIIAPLE_03216 0.0 ilvB 2.2.1.6 E Acetolactate synthase
JGIIAPLE_03218 7.6e-82 ysnE K acetyltransferase
JGIIAPLE_03219 9.1e-134 ysnF S protein conserved in bacteria
JGIIAPLE_03221 1.4e-92 ysnB S Phosphoesterase
JGIIAPLE_03222 4.5e-103 rdgB 3.6.1.66 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JGIIAPLE_03223 1.8e-133 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JGIIAPLE_03224 2.9e-196 gerM S COG5401 Spore germination protein
JGIIAPLE_03225 2.1e-154 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
JGIIAPLE_03226 2.3e-75 ysmB 2.4.2.28 K helix_turn_helix multiple antibiotic resistance protein
JGIIAPLE_03227 3.3e-30 gerE K Transcriptional regulator
JGIIAPLE_03228 7.7e-79 ybgC 3.1.2.23, 3.1.2.28 S thioesterase
JGIIAPLE_03229 4.6e-148 sdhB 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
JGIIAPLE_03230 0.0 sdhA 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
JGIIAPLE_03231 2.4e-107 sdhC C succinate dehydrogenase
JGIIAPLE_03232 1.2e-79 yslB S Protein of unknown function (DUF2507)
JGIIAPLE_03233 1.3e-216 lysC 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
JGIIAPLE_03234 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JGIIAPLE_03235 2e-52 trxA O Belongs to the thioredoxin family
JGIIAPLE_03236 4e-305 xsa 3.2.1.55 GH51 G Alpha-L-arabinofuranosidase C-terminus
JGIIAPLE_03238 4.2e-178 etfA C Electron transfer flavoprotein
JGIIAPLE_03239 1.2e-135 etfB C Electron transfer flavoprotein
JGIIAPLE_03240 3.1e-136 fadB 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
JGIIAPLE_03241 2.7e-100 fadR K Transcriptional regulator
JGIIAPLE_03242 0.0 lcfA 6.2.1.3 IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
JGIIAPLE_03243 7.3e-68 yshE S membrane
JGIIAPLE_03244 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JGIIAPLE_03245 0.0 polX L COG1796 DNA polymerase IV (family X)
JGIIAPLE_03246 1.3e-85 cvpA S membrane protein, required for colicin V production
JGIIAPLE_03247 2.4e-40 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JGIIAPLE_03248 4e-170 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JGIIAPLE_03249 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JGIIAPLE_03250 2.8e-196 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JGIIAPLE_03251 3.1e-133 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JGIIAPLE_03252 2.6e-32 sspI S Belongs to the SspI family
JGIIAPLE_03253 4.4e-208 ysfB KT regulator
JGIIAPLE_03254 7.2e-264 glcD 1.1.3.15 C Glycolate oxidase subunit
JGIIAPLE_03255 5.6e-258 glcF C Glycolate oxidase
JGIIAPLE_03256 3.6e-38 ysfE 4.4.1.5 E lactoylglutathione lyase activity
JGIIAPLE_03258 0.0 cstA T Carbon starvation protein
JGIIAPLE_03259 4.6e-301 abfA 3.2.1.55 GH51 G alpha-L-arabinofuranosidase activity
JGIIAPLE_03260 3.4e-144 araQ G transport system permease
JGIIAPLE_03261 1.4e-167 araP G carbohydrate transport
JGIIAPLE_03262 2.8e-254 araN G carbohydrate transport
JGIIAPLE_03263 5e-226 egsA 1.1.1.261 I Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
JGIIAPLE_03264 4.1e-147 araL 3.1.3.41 G Haloacid dehalogenase-like hydrolase
JGIIAPLE_03265 8.4e-133 araD 4.1.2.17, 4.2.1.109, 5.1.3.4 G COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
JGIIAPLE_03266 0.0 araB 2.7.1.16 C Belongs to the ribulokinase family
JGIIAPLE_03267 1.9e-294 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
JGIIAPLE_03268 2.1e-190 abnA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
JGIIAPLE_03269 4.5e-205 ysdC G COG1363 Cellulase M and related proteins
JGIIAPLE_03270 9.2e-68 ysdB S Sigma-w pathway protein YsdB
JGIIAPLE_03271 7.5e-45 ysdA S Membrane
JGIIAPLE_03272 3.6e-58 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JGIIAPLE_03273 9e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
JGIIAPLE_03274 3.3e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JGIIAPLE_03276 2.4e-111 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
JGIIAPLE_03277 2.2e-49 lrgA S Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgB, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
JGIIAPLE_03278 6.3e-131 lytT T COG3279 Response regulator of the LytR AlgR family
JGIIAPLE_03279 0.0 lytS 2.7.13.3 T Histidine kinase
JGIIAPLE_03280 1.5e-149 ysaA S HAD-hyrolase-like
JGIIAPLE_03281 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JGIIAPLE_03282 3.8e-159 ytxC S YtxC-like family
JGIIAPLE_03283 4.9e-111 ytxB S SNARE associated Golgi protein
JGIIAPLE_03284 3e-173 dnaI L Primosomal protein DnaI
JGIIAPLE_03285 3.5e-266 dnaB L Membrane attachment protein
JGIIAPLE_03286 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JGIIAPLE_03287 2e-67 speH 4.1.1.50 E Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JGIIAPLE_03288 2.8e-193 gapB 1.2.1.12, 1.2.1.59 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JGIIAPLE_03289 9.9e-67 ytcD K Transcriptional regulator
JGIIAPLE_03290 4.9e-205 ytbD EGP Major facilitator Superfamily
JGIIAPLE_03291 8.9e-161 ytbE S reductase
JGIIAPLE_03292 7.6e-98 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JGIIAPLE_03293 1.1e-107 ytaF P Probably functions as a manganese efflux pump
JGIIAPLE_03294 2e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
JGIIAPLE_03295 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JGIIAPLE_03296 0.0 phoR 2.7.13.3 T Signal transduction histidine kinase
JGIIAPLE_03297 2.2e-131 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_03298 1.1e-170 mdh 1.1.1.37 C Catalyzes the reversible oxidation of malate to oxaloacetate
JGIIAPLE_03299 1.8e-242 icd 1.1.1.42 C isocitrate
JGIIAPLE_03300 4.7e-210 citZ 2.3.3.1 C Belongs to the citrate synthase family
JGIIAPLE_03301 4.7e-71 yeaL S membrane
JGIIAPLE_03302 2.6e-192 ytvI S sporulation integral membrane protein YtvI
JGIIAPLE_03303 1.8e-63 fxsA S COG3030 Protein affecting phage T7 exclusion by the F plasmid
JGIIAPLE_03304 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
JGIIAPLE_03305 3.4e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
JGIIAPLE_03306 4.3e-183 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
JGIIAPLE_03307 8.4e-162 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JGIIAPLE_03308 1.5e-225 ytsJ 1.1.1.38 C Malate dehydrogenase
JGIIAPLE_03309 0.0 dnaE 2.7.7.7 L DNA polymerase
JGIIAPLE_03310 3.2e-56 ytrH S Sporulation protein YtrH
JGIIAPLE_03311 8.2e-69 ytrI
JGIIAPLE_03312 9.2e-29
JGIIAPLE_03313 7.8e-182 nrnA 3.1.13.3, 3.1.3.7 S COG0618 Exopolyphosphatase-related proteins
JGIIAPLE_03314 2.4e-47 ytpI S YtpI-like protein
JGIIAPLE_03315 8e-241 ytoI K transcriptional regulator containing CBS domains
JGIIAPLE_03316 1.2e-158 ytnM S membrane transporter protein
JGIIAPLE_03317 4.9e-240 ytnL 3.5.1.47 E hydrolase activity
JGIIAPLE_03318 6.3e-128 ribF 2.7.1.26, 2.7.7.2 H Riboflavin kinase
JGIIAPLE_03319 1e-256 moxC C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JGIIAPLE_03320 2.9e-47 ytnI O COG0695 Glutaredoxin and related proteins
JGIIAPLE_03321 1.2e-185 ytmO C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JGIIAPLE_03322 1e-142 tcyN 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
JGIIAPLE_03323 7.6e-121 tcyM U Binding-protein-dependent transport system inner membrane component
JGIIAPLE_03324 3.7e-123 tcyL P Binding-protein-dependent transport system inner membrane component
JGIIAPLE_03325 1.5e-149 tcyK M Bacterial periplasmic substrate-binding proteins
JGIIAPLE_03326 9.5e-152 tcyK ET Bacterial periplasmic substrate-binding proteins
JGIIAPLE_03327 1.5e-100 ytmI K Acetyltransferase (GNAT) domain
JGIIAPLE_03328 2.9e-173 ytlI K LysR substrate binding domain
JGIIAPLE_03329 1.7e-130 ytkL S Belongs to the UPF0173 family
JGIIAPLE_03330 1.1e-141 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_03332 3.1e-267 argH 4.3.2.1 E argininosuccinate lyase
JGIIAPLE_03333 2.3e-234 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
JGIIAPLE_03334 3.6e-88 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
JGIIAPLE_03335 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JGIIAPLE_03336 7e-165 ytxK 2.1.1.72 L DNA methylase
JGIIAPLE_03337 2.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JGIIAPLE_03338 8.7e-70 ytfJ S Sporulation protein YtfJ
JGIIAPLE_03339 5.6e-116 ytfI S Protein of unknown function (DUF2953)
JGIIAPLE_03340 1.3e-87 yteJ S RDD family
JGIIAPLE_03341 2.4e-181 sppA OU signal peptide peptidase SppA
JGIIAPLE_03342 2.2e-148 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JGIIAPLE_03343 0.0 ytcJ S amidohydrolase
JGIIAPLE_03344 2e-307 acsA 6.2.1.1, 6.2.1.2 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
JGIIAPLE_03345 2e-29 sspB S spore protein
JGIIAPLE_03346 3.5e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JGIIAPLE_03347 2.2e-210 iscS2 2.8.1.7 E Cysteine desulfurase
JGIIAPLE_03348 4.9e-238 brnQ E Component of the transport system for branched-chain amino acids
JGIIAPLE_03349 4.1e-274 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JGIIAPLE_03350 1.6e-154 hisK 3.1.3.15 E COG1387 Histidinol phosphatase and related hydrolases of the PHP family
JGIIAPLE_03351 3.4e-109 yttP K Transcriptional regulator
JGIIAPLE_03352 1.2e-88 ytsP 1.8.4.14 T GAF domain-containing protein
JGIIAPLE_03353 0.0 ytrP 2.7.7.65 T COG2199 FOG GGDEF domain
JGIIAPLE_03354 2.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JGIIAPLE_03356 3.6e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JGIIAPLE_03357 0.0 acsA 6.2.1.1 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
JGIIAPLE_03358 3.6e-122 acuA K Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
JGIIAPLE_03359 1.6e-117 acuB S Domain in cystathionine beta-synthase and other proteins.
JGIIAPLE_03360 1.9e-225 acuC BQ histone deacetylase
JGIIAPLE_03361 1.4e-125 motS N Flagellar motor protein
JGIIAPLE_03362 7.1e-147 motA N flagellar motor
JGIIAPLE_03363 1.7e-182 ccpA K catabolite control protein A
JGIIAPLE_03364 4.9e-196 aroF 2.5.1.54, 5.4.99.5 E Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
JGIIAPLE_03365 4.4e-55 ytxJ O Protein of unknown function (DUF2847)
JGIIAPLE_03366 6.6e-17 ytxH S COG4980 Gas vesicle protein
JGIIAPLE_03367 2.1e-17 ytxG S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JGIIAPLE_03368 1.6e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
JGIIAPLE_03369 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
JGIIAPLE_03370 9.7e-109 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JGIIAPLE_03371 9.8e-149 ytpQ S Belongs to the UPF0354 family
JGIIAPLE_03372 2.1e-57 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
JGIIAPLE_03373 5.9e-79 ytoQ S Nucleoside 2-deoxyribosyltransferase YtoQ
JGIIAPLE_03374 4.7e-207 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
JGIIAPLE_03375 9.8e-52 ytzB S small secreted protein
JGIIAPLE_03376 0.0 sfcA 1.1.1.38 C Malate dehydrogenase
JGIIAPLE_03377 6.4e-151 ytnP S COG0491 Zn-dependent hydrolases, including glyoxylases
JGIIAPLE_03378 1.4e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JGIIAPLE_03379 2e-45 ytzH S YtzH-like protein
JGIIAPLE_03380 6.1e-151 ytmP 2.7.1.89 M Phosphotransferase
JGIIAPLE_03381 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
JGIIAPLE_03382 2.9e-181 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
JGIIAPLE_03383 1.3e-165 ytlQ
JGIIAPLE_03384 4.3e-103 ligT 3.1.4.58, 3.5.1.42 J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JGIIAPLE_03385 8.6e-173 ytkP 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
JGIIAPLE_03386 7.1e-272 pepV 3.5.1.18 E Dipeptidase
JGIIAPLE_03387 7.2e-226 pbuO S permease
JGIIAPLE_03388 3.9e-207 ythQ U Bacterial ABC transporter protein EcsB
JGIIAPLE_03389 4.3e-132 ythP V ABC transporter
JGIIAPLE_03390 2.4e-33 ytzE K COG1349 Transcriptional regulators of sugar metabolism
JGIIAPLE_03391 2.6e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JGIIAPLE_03392 1.3e-293 ytgP S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
JGIIAPLE_03393 8.2e-232 ytfP S HI0933-like protein
JGIIAPLE_03394 3.4e-283 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
JGIIAPLE_03395 3.1e-26 yteV S Sporulation protein Cse60
JGIIAPLE_03396 4.8e-117 yteU S Integral membrane protein
JGIIAPLE_03397 2.6e-249 yteT S Oxidoreductase family, C-terminal alpha/beta domain
JGIIAPLE_03398 4.6e-73 yteS G transport
JGIIAPLE_03399 4.7e-226 yteR 3.2.1.172 GH105 G unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
JGIIAPLE_03400 2e-172 lplB G COG4209 ABC-type polysaccharide transport system, permease component
JGIIAPLE_03401 0.0 ytdP K Transcriptional regulator
JGIIAPLE_03402 1.2e-290 ytcQ G COG1653 ABC-type sugar transport system, periplasmic component
JGIIAPLE_03403 1.5e-150 ytcP G COG0395 ABC-type sugar transport system, permease component
JGIIAPLE_03404 9.6e-138 udh 1.1.1.203, 1.1.1.388 GM NAD dependent epimerase/dehydratase family
JGIIAPLE_03405 1.9e-225 bioI 1.14.14.46 C Cytochrome P450
JGIIAPLE_03406 2.2e-190 bioB 2.8.1.6 H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JGIIAPLE_03407 3.7e-128 bioD 6.3.3.3 H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
JGIIAPLE_03408 1.4e-220 bioF 2.3.1.29, 2.3.1.47, 6.2.1.14 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
JGIIAPLE_03409 2.4e-261 bioA 2.6.1.105, 2.6.1.62 H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
JGIIAPLE_03410 1.6e-142 bioW 2.3.1.47, 6.2.1.14 H Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
JGIIAPLE_03411 1.3e-173 ytaP S Acetyl xylan esterase (AXE1)
JGIIAPLE_03412 2.3e-190 msmR K Transcriptional regulator
JGIIAPLE_03413 2.3e-248 msmE G Bacterial extracellular solute-binding protein
JGIIAPLE_03414 3.7e-168 amyD P ABC transporter
JGIIAPLE_03415 1.5e-144 amyC P ABC transporter (permease)
JGIIAPLE_03416 4e-253 melA 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
JGIIAPLE_03417 2.1e-51 ytwF P Sulfurtransferase
JGIIAPLE_03418 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
JGIIAPLE_03419 7.7e-55 ytvB S Protein of unknown function (DUF4257)
JGIIAPLE_03420 6e-143 pfyP T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
JGIIAPLE_03421 2.1e-211 yttB EGP Major facilitator Superfamily
JGIIAPLE_03422 1.8e-43 yttA 2.7.13.3 S Pfam Transposase IS66
JGIIAPLE_03423 0.0 bceB V ABC transporter (permease)
JGIIAPLE_03424 1.1e-138 bceA V ABC transporter, ATP-binding protein
JGIIAPLE_03425 5.6e-186 T PhoQ Sensor
JGIIAPLE_03426 5.2e-130 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_03427 8.5e-235 ytrF V COG0577 ABC-type antimicrobial peptide transport system, permease component
JGIIAPLE_03428 3.1e-127 ytrE V ABC transporter, ATP-binding protein
JGIIAPLE_03429 5.9e-148
JGIIAPLE_03430 6.1e-169 P ABC-2 family transporter protein
JGIIAPLE_03431 1.1e-161 ytrB P abc transporter atp-binding protein
JGIIAPLE_03432 5.1e-66 ytrA K GntR family transcriptional regulator
JGIIAPLE_03434 6.7e-41 ytzC S Protein of unknown function (DUF2524)
JGIIAPLE_03435 2.1e-190 yhcC S Fe-S oxidoreductase
JGIIAPLE_03436 3.3e-106 ytqB J Putative rRNA methylase
JGIIAPLE_03437 5.7e-216 ytpB 4.2.3.130 S Tetraprenyl-beta-curcumene synthase
JGIIAPLE_03438 3.3e-149 ytpA 3.1.1.5 I Alpha beta hydrolase
JGIIAPLE_03439 1.6e-59 ytoA S COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JGIIAPLE_03440 8.4e-257 ytnA E COG1113 Gamma-aminobutyrate permease and related permeases
JGIIAPLE_03441 0.0 asnB 6.3.5.4 E Asparagine synthase
JGIIAPLE_03442 4.3e-225 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JGIIAPLE_03443 2.2e-311 pckA 4.1.1.49 C Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JGIIAPLE_03444 1.2e-38 ytmB S Protein of unknown function (DUF2584)
JGIIAPLE_03445 5.5e-149 ytmA E COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
JGIIAPLE_03446 5e-190 ytlA P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
JGIIAPLE_03447 1.4e-144 ytlC P ABC transporter
JGIIAPLE_03448 1.8e-142 ytlD P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
JGIIAPLE_03449 2.8e-87 ytkD 3.6.1.55 L Belongs to the Nudix hydrolase family
JGIIAPLE_03450 5.4e-63 ytkC S Bacteriophage holin family
JGIIAPLE_03451 2.1e-76 dps P Belongs to the Dps family
JGIIAPLE_03453 3.6e-73 ytkA S YtkA-like
JGIIAPLE_03454 1.6e-87 luxS 4.4.1.21 T Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
JGIIAPLE_03455 5.7e-103 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
JGIIAPLE_03456 3.6e-41 rpmE2 J Ribosomal protein L31
JGIIAPLE_03457 4.7e-249 cydA 1.10.3.14 C oxidase, subunit
JGIIAPLE_03458 7.3e-189 cydB 1.10.3.14 C COG1294 Cytochrome bd-type quinol oxidase, subunit 2
JGIIAPLE_03459 1.1e-24 S Domain of Unknown Function (DUF1540)
JGIIAPLE_03460 1.4e-151 troD P 'COG1108 ABC-type Mn2 Zn2 transport systems, permease components'
JGIIAPLE_03461 3.2e-234 mntC P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
JGIIAPLE_03462 1.2e-140 mntB P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
JGIIAPLE_03463 1.8e-170 troA P Belongs to the bacterial solute-binding protein 9 family
JGIIAPLE_03464 1.4e-214 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
JGIIAPLE_03465 2.4e-278 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
JGIIAPLE_03466 4.2e-155 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JGIIAPLE_03467 3.8e-156 menH 4.2.99.20 S Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
JGIIAPLE_03468 0.0 menD 2.2.1.9 H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
JGIIAPLE_03469 8.5e-273 menF 5.4.4.2 HQ Isochorismate synthase
JGIIAPLE_03470 2.6e-132 dksA T COG1734 DnaK suppressor protein
JGIIAPLE_03471 1e-153 galU 2.7.7.9 M Nucleotidyl transferase
JGIIAPLE_03472 1.5e-244 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JGIIAPLE_03473 3.9e-181 ytcB 5.1.3.2 M NAD-dependent epimerase dehydratase
JGIIAPLE_03474 3.6e-235 ytcC M Glycosyltransferase Family 4
JGIIAPLE_03476 2.3e-206 cotS S Seems to be required for the assembly of the CotSA protein in spores
JGIIAPLE_03477 1.8e-217 cotSA M Glycosyl transferases group 1
JGIIAPLE_03478 1.8e-206 cotI S Spore coat protein
JGIIAPLE_03479 9.9e-77 tspO T membrane
JGIIAPLE_03480 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
JGIIAPLE_03481 4.3e-288 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
JGIIAPLE_03482 1.3e-177 glgD 2.4.1.21, 2.7.7.27 GT5 G Glucose-1-phosphate adenylyltransferase, GlgD subunit
JGIIAPLE_03483 3.6e-197 glgC 2.7.7.27 G Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JGIIAPLE_03484 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JGIIAPLE_03496 2.3e-07 ftsW D Belongs to the SEDS family
JGIIAPLE_03498 9.3e-13 ydaO E amino acid
JGIIAPLE_03500 2.8e-09 cysC 2.7.1.25 P Catalyzes the synthesis of activated sulfate
JGIIAPLE_03501 1.1e-10 helD 3.6.4.12 L DNA helicase
JGIIAPLE_03502 1.1e-09 yqfL 2.7.11.33, 2.7.4.28 S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
JGIIAPLE_03505 5.8e-08 yxeM M Belongs to the bacterial solute-binding protein 3 family
JGIIAPLE_03506 2.6e-07 yokA L Recombinase
JGIIAPLE_03510 7e-16 ccs1 O COG1333 ResB protein required for cytochrome c biosynthesis
JGIIAPLE_03511 2.3e-16 ydcK S Belongs to the SprT family
JGIIAPLE_03513 1.2e-14 lytS 2.7.13.3 T Histidine kinase
JGIIAPLE_03517 2.9e-13 yclK 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
JGIIAPLE_03519 8.6e-09 rocE E amino acid
JGIIAPLE_03520 3e-07 rocE E amino acid
JGIIAPLE_03522 1.6e-12 P ABC-2 family transporter protein
JGIIAPLE_03524 4.3e-09 yobR 2.3.1.1 J FR47-like protein
JGIIAPLE_03526 3.4e-16 yprA L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
JGIIAPLE_03528 5e-227 ydeG EGP Major facilitator Superfamily
JGIIAPLE_03529 1.5e-143 yddR S Zn-dependent hydrolases of the beta-lactamase fold
JGIIAPLE_03530 9.6e-100 yddQ 3.5.1.19 Q Isochorismatase family
JGIIAPLE_03531 3.9e-78 lrpB K transcriptional
JGIIAPLE_03532 2.4e-71 lrpA K transcriptional
JGIIAPLE_03533 2.7e-188 luxA C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JGIIAPLE_03534 3.4e-161
JGIIAPLE_03536 1.4e-74 S response regulator aspartate phosphatase
JGIIAPLE_03537 9.5e-128 S TIR domain
JGIIAPLE_03538 4.1e-65 S Domain of unknown function with cystatin-like fold (DUF4467)
JGIIAPLE_03539 8.7e-87 yddI
JGIIAPLE_03540 2.4e-189 yddH CBM50 M Lysozyme-like
JGIIAPLE_03541 0.0 yddG S maturation of SSU-rRNA
JGIIAPLE_03542 2e-55 S Domain of unknown function (DUF1874)
JGIIAPLE_03543 0.0 yddE S AAA-like domain
JGIIAPLE_03544 2.4e-95 yddD S TcpE family
JGIIAPLE_03545 3e-40 yddC
JGIIAPLE_03546 1.5e-173 yddB S Conjugative transposon protein TcpC
JGIIAPLE_03547 1.2e-32 yddA
JGIIAPLE_03550 1.5e-205 nicK L Replication initiation factor
JGIIAPLE_03551 1e-273 ydcQ D Ftsk spoiiie family protein
JGIIAPLE_03552 5.1e-63 S Bacterial protein of unknown function (DUF961)
JGIIAPLE_03554 8.3e-41
JGIIAPLE_03555 1.1e-16
JGIIAPLE_03556 4.3e-62 yvaO K Transcriptional
JGIIAPLE_03557 1.3e-90 immA E IrrE N-terminal-like domain
JGIIAPLE_03558 1.9e-211 L Belongs to the 'phage' integrase family
JGIIAPLE_03566 1.6e-84 ydcK S Belongs to the SprT family
JGIIAPLE_03567 0.0 yhgF K COG2183 Transcriptional accessory protein
JGIIAPLE_03568 1.6e-76 ydcH K helix_turn_helix multiple antibiotic resistance protein
JGIIAPLE_03569 1.5e-82 ydcG S EVE domain
JGIIAPLE_03572 4.8e-108 rsbX 3.1.3.16, 3.1.3.3 KT Sigma factor PP2C-like phosphatases
JGIIAPLE_03573 3.4e-138 sigB K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JGIIAPLE_03574 2.4e-86 rsbW 2.7.11.1 F Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
JGIIAPLE_03575 7e-53 rsbV T Belongs to the anti-sigma-factor antagonist family
JGIIAPLE_03576 7.1e-189 rsbU 3.1.3.3 KT phosphatase
JGIIAPLE_03577 1.3e-69 rsbT 2.7.11.1 T COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
JGIIAPLE_03578 5.2e-57 rsbS T antagonist
JGIIAPLE_03579 1.3e-143 rsbR T Positive regulator of sigma-B
JGIIAPLE_03580 2.5e-56 ndoA L Toxic component of a toxin-antitoxin (TA) module
JGIIAPLE_03581 4.8e-42 ndoAI K transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
JGIIAPLE_03582 2.3e-223 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JGIIAPLE_03583 2.9e-183 ydcC M COG2834 Outer membrane lipoprotein-sorting protein
JGIIAPLE_03584 2.5e-59 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JGIIAPLE_03585 1.8e-107 ydcA 3.4.21.105 S membrane protein (homolog of Drosophila rhomboid)
JGIIAPLE_03586 2.2e-263 ydbT S Membrane
JGIIAPLE_03587 2.1e-82 ydbS S Bacterial PH domain
JGIIAPLE_03588 9e-249 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
JGIIAPLE_03589 1.9e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JGIIAPLE_03590 4.6e-202 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JGIIAPLE_03591 2.3e-56 ydbP 2.7.1.180, 5.3.4.1 CO Thioredoxin
JGIIAPLE_03592 1.9e-150 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JGIIAPLE_03593 2.2e-07 S Fur-regulated basic protein A
JGIIAPLE_03594 1.1e-18 S Fur-regulated basic protein B
JGIIAPLE_03595 3e-220 ydbM 1.3.8.1 I acyl-CoA dehydrogenase
JGIIAPLE_03596 2.7e-52 ydbL
JGIIAPLE_03597 5.5e-125 ydbK S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
JGIIAPLE_03598 3.6e-171 ydbJ V ABC transporter, ATP-binding protein
JGIIAPLE_03599 4.4e-181 ydbI S AI-2E family transporter
JGIIAPLE_03600 6.3e-227 dctA U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
JGIIAPLE_03601 8.1e-120 dctR T COG4565 Response regulator of citrate malate metabolism
JGIIAPLE_03602 2.5e-297 dctS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
JGIIAPLE_03603 2.7e-199 dctB G COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
JGIIAPLE_03604 3.2e-155 ydbD P Catalase
JGIIAPLE_03605 2.8e-63 ydbC S Domain of unknown function (DUF4937
JGIIAPLE_03606 8.9e-59 ydbB G Cupin domain
JGIIAPLE_03608 3.8e-148 ydbA 3.6.3.4, 3.6.3.54 P EcsC protein family
JGIIAPLE_03609 3.3e-77 ydaT S Uncharacterized protein conserved in bacteria (DUF2188)
JGIIAPLE_03611 1e-224 mntH P H( )-stimulated, divalent metal cation uptake system
JGIIAPLE_03612 9.4e-40
JGIIAPLE_03613 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
JGIIAPLE_03614 4.6e-79 mutT 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
JGIIAPLE_03615 0.0 ydaO E amino acid
JGIIAPLE_03616 0.0 ydaN S Bacterial cellulose synthase subunit
JGIIAPLE_03617 4.5e-233 ydaM M Glycosyl transferase family group 2
JGIIAPLE_03618 0.0 ydaL S Uncharacterized protein conserved in bacteria (DUF2334)
JGIIAPLE_03619 2e-152 ydaK T Diguanylate cyclase, GGDEF domain
JGIIAPLE_03620 1.5e-208 ydaJ M Belongs to the glycosyl hydrolase 8 (cellulase D) family
JGIIAPLE_03621 0.0 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JGIIAPLE_03622 2.5e-74 lrpC K Transcriptional regulator
JGIIAPLE_03623 5.1e-47 ydzA EGP Major facilitator Superfamily
JGIIAPLE_03624 4.1e-139 amj U Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
JGIIAPLE_03625 6.8e-77 ydaG 1.4.3.5 S general stress protein
JGIIAPLE_03626 5e-104 rimL 1.1.1.25 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
JGIIAPLE_03627 1.2e-96 MA20_27600 5.3.1.15 S Cupin 2, conserved barrel domain protein
JGIIAPLE_03628 1.4e-161 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_03629 1.1e-99 ydaC Q Methyltransferase domain
JGIIAPLE_03630 1.4e-294 ydaB IQ acyl-CoA ligase
JGIIAPLE_03631 0.0 mtlR K transcriptional regulator, MtlR
JGIIAPLE_03632 2.8e-176 ydhF S Oxidoreductase
JGIIAPLE_03633 0.0 pbpC 3.4.16.4 M Penicillin-binding Protein
JGIIAPLE_03634 1.4e-49 yczJ S biosynthesis
JGIIAPLE_03636 9.9e-120 ycsK E anatomical structure formation involved in morphogenesis
JGIIAPLE_03637 1.2e-132 kipR K Transcriptional regulator
JGIIAPLE_03638 5.1e-187 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
JGIIAPLE_03639 1.9e-135 kipI 3.5.1.54 E Allophanate hydrolase subunit 1
JGIIAPLE_03640 9.6e-149 ycsI S Belongs to the D-glutamate cyclase family
JGIIAPLE_03641 6.5e-213 ycsG P COG1914 Mn2 and Fe2 transporters of the NRAMP family
JGIIAPLE_03642 1.2e-140 ycsF S Belongs to the UPF0271 (lamB) family
JGIIAPLE_03643 8e-137 ycsE 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
JGIIAPLE_03645 5.4e-68 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
JGIIAPLE_03646 5e-113 M1-673 3.1.1.45 Q COG0412 Dienelactone hydrolase and related enzymes
JGIIAPLE_03647 7.6e-76 sipT 3.4.21.89 U Belongs to the peptidase S26 family
JGIIAPLE_03648 3.2e-10 sipT 3.4.21.89 U Belongs to the peptidase S26 family
JGIIAPLE_03649 3.8e-201 ycsA 1.1.1.83, 1.1.1.93, 4.1.1.73 CE Tartrate dehydrogenase
JGIIAPLE_03650 7.3e-211 mtlD 1.1.1.17 G COG0246 Mannitol-1-phosphate altronate dehydrogenases
JGIIAPLE_03651 2e-71 mtlF 2.7.1.197 G COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
JGIIAPLE_03652 5.6e-240 mtlA 2.7.1.197 G COG2213 Phosphotransferase system, mannitol-specific IIBC component
JGIIAPLE_03653 7.3e-56
JGIIAPLE_03654 1.7e-107 ycnK K COG1349 Transcriptional regulators of sugar metabolism
JGIIAPLE_03655 1.4e-308 ycnJ P protein, homolog of Cu resistance protein CopC
JGIIAPLE_03656 1.3e-100 ycnI S protein conserved in bacteria
JGIIAPLE_03657 9.9e-146 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_03658 6.1e-149 glcU U Glucose uptake
JGIIAPLE_03659 3.4e-266 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
JGIIAPLE_03660 4.4e-247 gabT 2.6.1.19, 2.6.1.22 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JGIIAPLE_03661 1.3e-273 gabR K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
JGIIAPLE_03662 2.2e-51 yczG K helix_turn_helix, Arsenical Resistance Operon Repressor
JGIIAPLE_03663 1.6e-45 ycnE S Monooxygenase
JGIIAPLE_03664 4.4e-135 nfrA2 1.5.1.38, 1.5.1.39 C Oxidoreductase
JGIIAPLE_03665 6.5e-154 ycnC K Transcriptional regulator
JGIIAPLE_03666 1.4e-251 ycnB EGP Major facilitator Superfamily
JGIIAPLE_03667 5.5e-175 yclQ P COG4607 ABC-type enterochelin transport system, periplasmic component
JGIIAPLE_03668 4.7e-137 yclP 3.6.3.34 P ABC transporter, ATP-binding protein
JGIIAPLE_03669 2.6e-164 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_03670 1.6e-161 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_03671 7.5e-242 lysC 2.7.2.4 E Belongs to the aspartokinase family
JGIIAPLE_03674 5.2e-71 S aspartate phosphatase
JGIIAPLE_03675 1.8e-262 yclK 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
JGIIAPLE_03676 1.4e-127 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_03677 1.7e-204 yclI V ABC transporter (permease) YclI
JGIIAPLE_03678 3.9e-122 yclH P ABC transporter
JGIIAPLE_03679 9.9e-200 gerKB F Spore germination protein
JGIIAPLE_03680 1.3e-232 gerKC S spore germination
JGIIAPLE_03681 6.8e-282 gerKA EG Spore germination protein
JGIIAPLE_03683 2.9e-310 yclG M Pectate lyase superfamily protein
JGIIAPLE_03684 1.5e-267 dtpT E amino acid peptide transporter
JGIIAPLE_03685 6.2e-162 yclE 3.4.11.5 S Alpha beta hydrolase
JGIIAPLE_03686 1.1e-83 yclD
JGIIAPLE_03687 4e-39 bsdD 4.1.1.61 S response to toxic substance
JGIIAPLE_03688 1.8e-283 yclC 4.1.1.61 H Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate
JGIIAPLE_03689 2e-109 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
JGIIAPLE_03690 4.9e-162 bsdA K LysR substrate binding domain
JGIIAPLE_03691 1.5e-141 tcyA ET Belongs to the bacterial solute-binding protein 3 family
JGIIAPLE_03692 6.2e-123 tcyB P COG0765 ABC-type amino acid transport system, permease component
JGIIAPLE_03693 2.8e-134 tcyC 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
JGIIAPLE_03694 4.4e-115 yczE S membrane
JGIIAPLE_03695 5.5e-113 acpT 2.7.8.7 H Belongs to the P-Pant transferase superfamily
JGIIAPLE_03696 4.4e-255 ycxD K GntR family transcriptional regulator
JGIIAPLE_03697 7.4e-164 ycxC EG EamA-like transporter family
JGIIAPLE_03698 4.9e-91 S YcxB-like protein
JGIIAPLE_03699 4.2e-228 EGP Major Facilitator Superfamily
JGIIAPLE_03700 5.7e-140 srfAD Q thioesterase
JGIIAPLE_03701 0.0 srfAC Q COG1020 Non-ribosomal peptide synthetase modules and related proteins
JGIIAPLE_03702 0.0 srfAB Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_03703 0.0 srfAA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JGIIAPLE_03704 1.3e-63 hxlR K transcriptional
JGIIAPLE_03705 3.3e-107 hxlA 4.1.2.43 G 3-hexulose-6-phosphate synthase
JGIIAPLE_03706 4.6e-97 hxlB 4.1.2.43, 5.3.1.27 G SIS domain
JGIIAPLE_03707 3e-187 tlpC 2.7.13.3 NT chemotaxis protein
JGIIAPLE_03708 3.2e-72 nucA M Deoxyribonuclease NucA/NucB
JGIIAPLE_03709 3.4e-70 nin S Competence protein J (ComJ)
JGIIAPLE_03710 1.2e-298 yckE 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JGIIAPLE_03711 3.5e-52 yckD S Protein of unknown function (DUF2680)
JGIIAPLE_03712 3.3e-77 yckC S membrane
JGIIAPLE_03715 1.1e-132 yckB ET COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain
JGIIAPLE_03716 2.4e-116 yecS P COG0765 ABC-type amino acid transport system, permease component
JGIIAPLE_03717 1.4e-228 yciC S GTPases (G3E family)
JGIIAPLE_03718 5.5e-109 yciB M ErfK YbiS YcfS YnhG
JGIIAPLE_03719 1.4e-172 folE2 3.5.4.16 S Converts GTP to 7,8-dihydroneopterin triphosphate
JGIIAPLE_03720 7.6e-222 nasA P COG2223 Nitrate nitrite transporter
JGIIAPLE_03721 0.0 nirB 1.7.1.15 C Assimilatory nitrate reductase (electron transfer subunit)
JGIIAPLE_03722 0.0 nasC C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JGIIAPLE_03723 0.0 nirB 1.7.1.15 C Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JGIIAPLE_03724 4.6e-57 nirD 1.7.1.15 P Nitrite reductase
JGIIAPLE_03725 9.3e-283 cobA 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
JGIIAPLE_03726 1.3e-193 ycgT 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
JGIIAPLE_03727 5.7e-163 I alpha/beta hydrolase fold
JGIIAPLE_03728 1.2e-139 ycgR S permeases
JGIIAPLE_03729 2.6e-147 ycgQ S membrane
JGIIAPLE_03730 1.6e-227 ycgP QT COG2508 Regulator of polyketide synthase expression
JGIIAPLE_03731 1.3e-76 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JGIIAPLE_03732 1.4e-163 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JGIIAPLE_03733 7.3e-294 rocA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
JGIIAPLE_03734 5.1e-170 ycgM E Proline dehydrogenase
JGIIAPLE_03735 2.9e-145 ycgL S Predicted nucleotidyltransferase
JGIIAPLE_03736 2.9e-184 cah 3.1.1.41 Q Acetyl xylan esterase (AXE1)
JGIIAPLE_03737 2.2e-179 oxyR3 K LysR substrate binding domain
JGIIAPLE_03738 3.6e-145 yafE Q ubiE/COQ5 methyltransferase family
JGIIAPLE_03739 3e-104 aroK 2.7.1.71, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JGIIAPLE_03740 2.5e-109 tmrB S AAA domain
JGIIAPLE_03741 1.5e-149 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
JGIIAPLE_03742 2.4e-112 ycgI S Domain of unknown function (DUF1989)
JGIIAPLE_03743 5.6e-250 ycgH E COG1113 Gamma-aminobutyrate permease and related permeases
JGIIAPLE_03744 1.2e-151 yqcI S YqcI/YcgG family
JGIIAPLE_03745 6.8e-113 ycgF E Lysine exporter protein LysE YggA
JGIIAPLE_03746 3.4e-77 emrR K helix_turn_helix multiple antibiotic resistance protein
JGIIAPLE_03747 6.2e-269 mdr EGP Major facilitator Superfamily
JGIIAPLE_03748 6.5e-293 lctP C L-lactate permease
JGIIAPLE_03749 3.3e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
JGIIAPLE_03750 0.0 amyE 3.2.1.1 GH13 G alpha-amylase
JGIIAPLE_03751 1.1e-98 ycgB
JGIIAPLE_03752 1e-257 ycgA S Membrane
JGIIAPLE_03753 1.2e-219 amhX S amidohydrolase
JGIIAPLE_03754 5.3e-164 opuAC E glycine betaine
JGIIAPLE_03755 1.3e-127 opuAB P glycine betaine
JGIIAPLE_03756 5.1e-229 proV 3.6.3.32 E glycine betaine
JGIIAPLE_03757 1.6e-45 K helix_turn_helix, Arsenical Resistance Operon Repressor
JGIIAPLE_03758 1.9e-209 yceJ EGP Uncharacterised MFS-type transporter YbfB
JGIIAPLE_03759 1e-218 naiP P Uncharacterised MFS-type transporter YbfB
JGIIAPLE_03760 2e-192 yceH P Belongs to the TelA family
JGIIAPLE_03761 0.0 yceG S Putative component of 'biosynthetic module'
JGIIAPLE_03762 6.3e-137 terC P Protein of unknown function (DUF475)
JGIIAPLE_03763 4.6e-108 yceE T proteins involved in stress response, homologs of TerZ and
JGIIAPLE_03764 2.8e-105 yceD T proteins involved in stress response, homologs of TerZ and
JGIIAPLE_03765 3.9e-110 yceC 3.5.4.33 T proteins involved in stress response, homologs of TerZ and
JGIIAPLE_03766 5.4e-189 yceB C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JGIIAPLE_03767 1.7e-135 adcB P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
JGIIAPLE_03768 2.5e-132 adcC P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
JGIIAPLE_03769 6.6e-168 adcA P Belongs to the bacterial solute-binding protein 9 family
JGIIAPLE_03770 0.0 ycdG 3.2.1.10 GH13 G COG0366 Glycosidases
JGIIAPLE_03771 1.6e-140 IQ Enoyl-(Acyl carrier protein) reductase
JGIIAPLE_03772 5.5e-174 S response regulator aspartate phosphatase
JGIIAPLE_03773 1.7e-95 cwlK M D-alanyl-D-alanine carboxypeptidase
JGIIAPLE_03774 6.7e-268 ycdC K Belongs to the sigma-70 factor family. ECF subfamily
JGIIAPLE_03775 5.9e-282 ycdB K Belongs to the sigma-70 factor family. ECF subfamily
JGIIAPLE_03776 6.6e-177 ycdA S Domain of unknown function (DUF5105)
JGIIAPLE_03777 1.6e-174 yccK C Aldo keto reductase
JGIIAPLE_03778 4.5e-203 natB CP ABC-2 family transporter protein
JGIIAPLE_03779 4.1e-133 natA 3.6.3.7 CP ATPases associated with a variety of cellular activities
JGIIAPLE_03780 1.2e-126 lytR_2 T LytTr DNA-binding domain
JGIIAPLE_03781 2e-161 2.7.13.3 T GHKL domain
JGIIAPLE_03782 9.5e-200 yccF K DNA-templated transcriptional preinitiation complex assembly
JGIIAPLE_03783 2e-59 S RDD family
JGIIAPLE_03784 5.6e-115 lip 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
JGIIAPLE_03785 2.2e-202 ansB 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
JGIIAPLE_03786 4.8e-102 yxaF K Transcriptional regulator
JGIIAPLE_03787 5.8e-229 lmrB EGP the major facilitator superfamily
JGIIAPLE_03788 6.2e-210 ycbU E Selenocysteine lyase
JGIIAPLE_03789 1.4e-121 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JGIIAPLE_03790 1.2e-124 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JGIIAPLE_03791 5e-28 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
JGIIAPLE_03792 0.0 phoD 3.1.3.1 P COG3540 Phosphodiesterase alkaline phosphatase D
JGIIAPLE_03793 6.6e-136 ycbR T vWA found in TerF C terminus
JGIIAPLE_03794 1.3e-78 sleB 3.5.1.28 M Cell wall
JGIIAPLE_03795 8.2e-53 ycbP S Protein of unknown function (DUF2512)
JGIIAPLE_03796 2.1e-115 S ABC-2 family transporter protein
JGIIAPLE_03797 4.8e-168 ycbN V ABC transporter, ATP-binding protein
JGIIAPLE_03798 2.4e-170 T PhoQ Sensor
JGIIAPLE_03799 1.7e-125 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JGIIAPLE_03800 7.3e-172 eamA1 EG spore germination
JGIIAPLE_03801 4.4e-24 rtpA K Tryptophan RNA-binding attenuator protein inhibitory protein
JGIIAPLE_03802 1.8e-178 ycbJ S Macrolide 2'-phosphotransferase
JGIIAPLE_03803 3.7e-298 garD 4.2.1.42, 4.2.1.7 G Altronate
JGIIAPLE_03804 1.5e-124 ycbG K FCD
JGIIAPLE_03805 2.2e-270 gudD 4.2.1.40 M Belongs to the mandelate racemase muconate lactonizing enzyme family
JGIIAPLE_03806 1.2e-255 gudP G COG0477 Permeases of the major facilitator superfamily
JGIIAPLE_03807 3.7e-274 ycbD C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
JGIIAPLE_03808 2.7e-174 kdgD 4.2.1.41 EM 5-dehydro-4-deoxyglucarate dehydratase activity
JGIIAPLE_03809 9e-170 glnL T Regulator
JGIIAPLE_03810 1.5e-229 phoQ 2.7.13.3 T Histidine kinase
JGIIAPLE_03811 1.5e-188 glsA 3.5.1.2 E Belongs to the glutaminase family
JGIIAPLE_03812 2.3e-257 agcS E Sodium alanine symporter
JGIIAPLE_03814 9.3e-183 mmuM 1.5.1.20, 2.1.1.10 H homocysteine
JGIIAPLE_03815 6.7e-262 mmuP E amino acid
JGIIAPLE_03816 5.4e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
JGIIAPLE_03818 4.9e-128 K UTRA
JGIIAPLE_03819 2.1e-137 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JGIIAPLE_03820 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JGIIAPLE_03821 4.9e-216 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
JGIIAPLE_03822 3.9e-192 yceA S Belongs to the UPF0176 family
JGIIAPLE_03823 6.7e-167 ybfP K Transcriptional regulator
JGIIAPLE_03824 4.3e-258 S Erythromycin esterase
JGIIAPLE_03825 3.2e-46 ybfN
JGIIAPLE_03826 5.6e-149 psd 4.1.1.65 I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
JGIIAPLE_03827 2.7e-85 ybfM S SNARE associated Golgi protein
JGIIAPLE_03828 3.2e-95 pssA 2.7.8.8 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JGIIAPLE_03829 2.5e-169 S Alpha/beta hydrolase family
JGIIAPLE_03831 6.9e-178 mpr 3.4.21.19 M Belongs to the peptidase S1B family
JGIIAPLE_03832 1.9e-214 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JGIIAPLE_03833 2.3e-145 msmR K AraC-like ligand binding domain
JGIIAPLE_03834 8.8e-162 ybfH EG EamA-like transporter family
JGIIAPLE_03835 0.0 ybfG 3.2.1.132 M Domain of unknown function (DUF1906)
JGIIAPLE_03837 2.2e-224 ybfB G COG0477 Permeases of the major facilitator superfamily
JGIIAPLE_03838 1.6e-171 ybfA 3.4.15.5 K FR47-like protein
JGIIAPLE_03839 2.9e-35 S Protein of unknown function (DUF2651)
JGIIAPLE_03840 7.3e-258 glpT G -transporter
JGIIAPLE_03841 5.6e-166 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
JGIIAPLE_03842 1.8e-290 ybeC E amino acid
JGIIAPLE_03843 4.9e-41 ybyB
JGIIAPLE_03844 1.4e-247 cypC 1.11.2.4, 1.14.14.1 Q Cytochrome P450
JGIIAPLE_03845 7.2e-152 ybxI 3.5.2.6 V beta-lactamase
JGIIAPLE_03846 4.9e-30 ybxH S Family of unknown function (DUF5370)
JGIIAPLE_03847 3.7e-38 csgA S Sigma-G-dependent sporulation-specific SASP protein
JGIIAPLE_03848 2.4e-259 yifK E COG1113 Gamma-aminobutyrate permease and related permeases
JGIIAPLE_03849 1.5e-217 ybdO S Domain of unknown function (DUF4885)
JGIIAPLE_03850 4.8e-154 ybdN
JGIIAPLE_03851 1.6e-140 KLT Protein tyrosine kinase
JGIIAPLE_03853 1.8e-173 T His Kinase A (phospho-acceptor) domain
JGIIAPLE_03854 1.5e-123 T Transcriptional regulatory protein, C terminal
JGIIAPLE_03855 6.2e-182 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
JGIIAPLE_03856 9.6e-79 txn CO Thioredoxin-like
JGIIAPLE_03857 7.8e-91 C HEAT repeats
JGIIAPLE_03858 4e-248 skfF S ABC transporter
JGIIAPLE_03859 1.9e-135 skfE V ABC transporter
JGIIAPLE_03860 1.6e-277 V CAAX protease self-immunity
JGIIAPLE_03861 9.1e-239 J 4Fe-4S single cluster domain
JGIIAPLE_03863 2e-203 ybcL EGP Major facilitator Superfamily
JGIIAPLE_03864 5.1e-50 ybzH K Helix-turn-helix domain
JGIIAPLE_03865 4.7e-61 ybcI S Uncharacterized conserved protein (DUF2294)
JGIIAPLE_03866 3.9e-47
JGIIAPLE_03867 3.7e-96 can 4.2.1.1 P carbonic anhydrase
JGIIAPLE_03868 0.0 ybcC S Belongs to the UPF0753 family
JGIIAPLE_03869 1.5e-278 ndhF 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
JGIIAPLE_03870 5.1e-101 ogt 2.1.1.63, 3.2.2.21 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JGIIAPLE_03871 1.4e-121 adaA 3.2.2.21 K Transcriptional regulator
JGIIAPLE_03872 2.1e-176 alkA 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JGIIAPLE_03873 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JGIIAPLE_03874 9.3e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JGIIAPLE_03875 3e-225 ybbR S protein conserved in bacteria
JGIIAPLE_03876 2.7e-146 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JGIIAPLE_03877 1.7e-103 rsiW K Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
JGIIAPLE_03878 8.5e-99 sigW K Belongs to the sigma-70 factor family. ECF subfamily
JGIIAPLE_03884 3.9e-78 ybbK 2.4.2.1, 6.3.2.4 S Protein of unknown function (DUF523)
JGIIAPLE_03885 6.4e-87 ybbJ J acetyltransferase
JGIIAPLE_03886 2.1e-163 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JGIIAPLE_03887 1.1e-150 ybbH K transcriptional
JGIIAPLE_03888 9.8e-234 ybbF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JGIIAPLE_03889 4e-256 yfeW 3.4.16.4 V Belongs to the UPF0214 family
JGIIAPLE_03890 0.0 ybbD 3.2.1.52 G Belongs to the glycosyl hydrolase 3 family
JGIIAPLE_03891 4.4e-241 ybbC 3.2.1.52 S protein conserved in bacteria
JGIIAPLE_03892 5.4e-308 ybbB K COG2207 AraC-type DNA-binding domain-containing proteins
JGIIAPLE_03893 7.2e-167 feuA P Iron-uptake system-binding protein
JGIIAPLE_03894 1.1e-176 feuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_03895 3e-179 feuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_03896 2.2e-142 ybbA S Putative esterase
JGIIAPLE_03897 1.2e-161 ybaS 1.1.1.58 S Na -dependent transporter
JGIIAPLE_03899 4.6e-250 ybaR P COG0659 Sulfate permease and related transporters (MFS superfamily)
JGIIAPLE_03902 8e-12 yycI S protein conserved in bacteria
JGIIAPLE_03906 5.3e-10 skfF S ABC transporter
JGIIAPLE_03911 2.9e-10 S Ion transport 2 domain protein
JGIIAPLE_03916 4.2e-08 ybeC E amino acid
JGIIAPLE_03917 2.4e-11 cspB K Cold shock
JGIIAPLE_03918 1.4e-14 feuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_03922 2.3e-10 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JGIIAPLE_03924 2.9e-11 cheA 2.7.13.3 NT COG0643 Chemotaxis protein histidine kinase and related kinases
JGIIAPLE_03925 3.2e-09 yqeD S SNARE associated Golgi protein
JGIIAPLE_03926 1.5e-07 ysxB J ribosomal protein
JGIIAPLE_03930 1.4e-15 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JGIIAPLE_03931 2.1e-14 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
JGIIAPLE_03934 2.5e-07 V ABC-2 family transporter protein
JGIIAPLE_03936 6.7e-167 ygxA S Nucleotidyltransferase-like
JGIIAPLE_03937 1.5e-56 ygzB S UPF0295 protein
JGIIAPLE_03938 4e-80 perR P Belongs to the Fur family
JGIIAPLE_03939 2.8e-87 bcp 1.11.1.15 O Peroxiredoxin
JGIIAPLE_03940 1.2e-246 gsaB 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
JGIIAPLE_03941 8.7e-180 ygaE S Membrane
JGIIAPLE_03942 1.8e-301 ygaD V ABC transporter
JGIIAPLE_03943 1.3e-104 ygaC J Belongs to the UPF0374 family
JGIIAPLE_03944 1.5e-37 ygaB S YgaB-like protein
JGIIAPLE_03945 2.4e-08 sspE S Small, acid-soluble spore protein, gamma-type
JGIIAPLE_03946 2.9e-134 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JGIIAPLE_03947 6.9e-36 yfhS
JGIIAPLE_03948 8.6e-212 mutY L A G-specific
JGIIAPLE_03949 5.5e-186 yfhP S membrane-bound metal-dependent
JGIIAPLE_03950 0.0 yfhO S Bacterial membrane protein YfhO
JGIIAPLE_03951 2.7e-185 csbB GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
JGIIAPLE_03952 6.7e-172 yfhM S Alpha beta hydrolase
JGIIAPLE_03953 3.5e-51 yfhL S SdpI/YhfL protein family
JGIIAPLE_03954 9.2e-92 batE T Bacterial SH3 domain homologues
JGIIAPLE_03955 1.3e-44 yfhJ S WVELL protein
JGIIAPLE_03956 6.2e-20 sspK S reproduction
JGIIAPLE_03957 1.1e-209 yfhI EGP Major facilitator Superfamily
JGIIAPLE_03959 9.7e-52 yfhH S Protein of unknown function (DUF1811)
JGIIAPLE_03960 1.1e-141 recX 2.4.1.337 GT4 S Modulates RecA activity
JGIIAPLE_03961 4.9e-173 yfhF S nucleoside-diphosphate sugar epimerase
JGIIAPLE_03963 2.1e-25 yfhD S YfhD-like protein
JGIIAPLE_03964 3.9e-107 yfhC C nitroreductase
JGIIAPLE_03965 1.8e-167 yfhB 5.3.3.17 S PhzF family
JGIIAPLE_03966 5.2e-171 yfhA P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_03967 3.1e-176 yfiZ P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_03968 6.2e-182 yfiY P ABC transporter substrate-binding protein
JGIIAPLE_03969 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JGIIAPLE_03970 3.1e-81 yfiV K transcriptional
JGIIAPLE_03971 8.7e-287 yfiU EGP Major facilitator Superfamily
JGIIAPLE_03972 3.3e-100 yfiT S Belongs to the metal hydrolase YfiT family
JGIIAPLE_03973 5.1e-221 yfiS EGP Major facilitator Superfamily
JGIIAPLE_03974 2e-109 yfiR K Transcriptional regulator
JGIIAPLE_03975 9e-198 yfiQ G COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
JGIIAPLE_03976 4.4e-80 estA 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
JGIIAPLE_03977 8.3e-99 padR K transcriptional
JGIIAPLE_03978 4.6e-208 V COG0842 ABC-type multidrug transport system, permease component
JGIIAPLE_03979 9.8e-214 V ABC-2 family transporter protein
JGIIAPLE_03980 6.2e-171 V ABC transporter, ATP-binding protein
JGIIAPLE_03981 3.2e-113 KT LuxR family transcriptional regulator
JGIIAPLE_03982 1.1e-214 yxjM T Histidine kinase
JGIIAPLE_03984 1.1e-233 S Oxidoreductase
JGIIAPLE_03985 8.4e-184 G Xylose isomerase
JGIIAPLE_03986 1.8e-262 iolT EGP Major facilitator Superfamily
JGIIAPLE_03987 1.5e-177 K AraC-like ligand binding domain
JGIIAPLE_03988 5.7e-163 yfiE 1.13.11.2 S glyoxalase
JGIIAPLE_03989 9.8e-65 mhqP S DoxX
JGIIAPLE_03990 0.0 yfiC V COG1132 ABC-type multidrug transport system, ATPase and permease components
JGIIAPLE_03991 2.1e-310 yfiB3 V ABC transporter
JGIIAPLE_03992 4.7e-296 glvC 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JGIIAPLE_03993 2.1e-140 glvR K Helix-turn-helix domain, rpiR family
JGIIAPLE_03994 9.9e-263 aglB 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
JGIIAPLE_03995 1.1e-44 yfjA S Belongs to the WXG100 family
JGIIAPLE_03996 9.2e-191 yfjB
JGIIAPLE_03997 4.1e-144 yfjC
JGIIAPLE_03998 1.8e-101 yfjD S Family of unknown function (DUF5381)
JGIIAPLE_03999 1.3e-80 S Family of unknown function (DUF5381)
JGIIAPLE_04000 4e-56 yfjF S UPF0060 membrane protein
JGIIAPLE_04001 1.2e-25 sspH S Belongs to the SspH family
JGIIAPLE_04002 0.0 acoR KQ COG3284 Transcriptional activator of acetoin glycerol metabolism
JGIIAPLE_04003 6.4e-257 acoL 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
JGIIAPLE_04004 2.9e-197 acoC 2.3.1.12, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
JGIIAPLE_04005 1e-190 acoB C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
JGIIAPLE_04006 1.2e-191 acoA C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
JGIIAPLE_04007 3e-29 yfjL
JGIIAPLE_04008 3.9e-86 yfjM S Psort location Cytoplasmic, score
JGIIAPLE_04009 5.1e-192 yfjN J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JGIIAPLE_04010 1.6e-39 S YfzA-like protein
JGIIAPLE_04011 1.1e-267 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JGIIAPLE_04012 1e-167 yfjP 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JGIIAPLE_04013 1.7e-184 corA P Mediates influx of magnesium ions
JGIIAPLE_04014 4.2e-150 yfjR 1.1.1.31 I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
JGIIAPLE_04015 2.6e-154 pdaA G deacetylase
JGIIAPLE_04016 1.1e-26 yfjT
JGIIAPLE_04017 5.4e-222 yfkA S YfkB-like domain
JGIIAPLE_04018 6e-149 yfkC M Mechanosensitive ion channel
JGIIAPLE_04019 1.2e-146 yfkD S YfkD-like protein
JGIIAPLE_04020 6.1e-183 cax P COG0387 Ca2 H antiporter
JGIIAPLE_04021 6.9e-220 ycaD EGP COG0477 Permeases of the major facilitator superfamily
JGIIAPLE_04022 5e-08
JGIIAPLE_04023 9.7e-144 yihY S Belongs to the UPF0761 family
JGIIAPLE_04024 8.4e-51 yfkI S gas vesicle protein
JGIIAPLE_04025 2.2e-84 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JGIIAPLE_04026 2.1e-29 yfkK S Belongs to the UPF0435 family
JGIIAPLE_04027 6.8e-207 ydiM EGP Major facilitator Superfamily
JGIIAPLE_04028 1.6e-91 yfkM 1.11.1.6, 3.5.1.124 S protease
JGIIAPLE_04029 0.0 cpdB 3.1.3.5, 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
JGIIAPLE_04030 1.6e-125 yfkO C nitroreductase
JGIIAPLE_04031 1.8e-133 treR K transcriptional
JGIIAPLE_04032 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
JGIIAPLE_04033 8.5e-257 treP 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
JGIIAPLE_04034 1.5e-283 yfkQ EG Spore germination protein
JGIIAPLE_04035 5.1e-207 yfkR S spore germination
JGIIAPLE_04037 1.6e-194 E Spore germination protein
JGIIAPLE_04038 3.2e-256 agcS_1 E Sodium alanine symporter
JGIIAPLE_04039 6e-67 yhdN S Domain of unknown function (DUF1992)
JGIIAPLE_04040 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
JGIIAPLE_04041 1.1e-250 nagE 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
JGIIAPLE_04042 1.1e-138 map 3.4.11.18 E Methionine aminopeptidase
JGIIAPLE_04043 2.4e-50 yflH S Protein of unknown function (DUF3243)
JGIIAPLE_04044 4.1e-19 yflI
JGIIAPLE_04045 4e-18 yflJ S Protein of unknown function (DUF2639)
JGIIAPLE_04046 9e-124 yflK S protein conserved in bacteria
JGIIAPLE_04047 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
JGIIAPLE_04048 1.3e-217 nos 1.14.14.47 C Belongs to the NOS family. Bacterial NOS oxygenase subfamily
JGIIAPLE_04049 5.5e-152 yflN S COG0491 Zn-dependent hydrolases, including glyoxylases
JGIIAPLE_04050 8.5e-227 citM C Citrate transporter
JGIIAPLE_04051 3e-181 yflP S Tripartite tricarboxylate transporter family receptor
JGIIAPLE_04052 8.9e-119 citT T response regulator
JGIIAPLE_04053 1e-290 citS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
JGIIAPLE_04054 3.2e-235 yflS P Sodium:sulfate symporter transmembrane region
JGIIAPLE_04055 3.8e-240 pel 4.2.2.10, 4.2.2.2 G Pectate lyase
JGIIAPLE_04056 7.6e-58 yflT S Heat induced stress protein YflT
JGIIAPLE_04057 2.9e-24 S Protein of unknown function (DUF3212)
JGIIAPLE_04058 3.4e-169 fecB P COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
JGIIAPLE_04059 4.3e-170 viuD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_04060 1.2e-169 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JGIIAPLE_04061 1.1e-149 yfmF 3.6.3.34 P ATPases associated with a variety of cellular activities
JGIIAPLE_04062 3.3e-296 1.14.99.50 S Sulfatase-modifying factor enzyme 1
JGIIAPLE_04063 7.7e-214 G Major Facilitator Superfamily
JGIIAPLE_04064 8.5e-190 yfmJ S N-terminal domain of oxidoreductase
JGIIAPLE_04065 7.5e-82 yfmK 2.3.1.128 K acetyltransferase
JGIIAPLE_04066 6.3e-202 yfmL 3.6.4.13 L COG0513 Superfamily II DNA and RNA helicases
JGIIAPLE_04067 1.9e-297 yfmM S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
JGIIAPLE_04068 1.5e-209 yfmO EGP Major facilitator Superfamily
JGIIAPLE_04069 2.8e-70 yfmP K transcriptional
JGIIAPLE_04070 3e-75 yfmQ S Uncharacterised protein from bacillus cereus group
JGIIAPLE_04071 0.0 yfmR S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
JGIIAPLE_04072 1.1e-113 yfmS NT chemotaxis protein
JGIIAPLE_04073 2.8e-279 yfmT 1.2.1.3, 1.2.1.67 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
JGIIAPLE_04074 1.3e-241 yfnA E amino acid
JGIIAPLE_04075 7.8e-134 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
JGIIAPLE_04076 2e-206 fsr P COG0477 Permeases of the major facilitator superfamily
JGIIAPLE_04077 3.5e-190 yfnD M Nucleotide-diphospho-sugar transferase
JGIIAPLE_04078 1.4e-225 yfnE 2.4.1.338 GT2 S Glycosyltransferase like family 2
JGIIAPLE_04079 3.8e-181 yfnF M Nucleotide-diphospho-sugar transferase
JGIIAPLE_04080 1.9e-172 yfnG 4.2.1.45 M dehydratase
JGIIAPLE_04081 2.1e-148 rfbF 2.7.7.33 JM Nucleotidyl transferase
JGIIAPLE_04082 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
JGIIAPLE_04083 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
JGIIAPLE_04084 3.6e-199 yetN S Protein of unknown function (DUF3900)
JGIIAPLE_04085 7.8e-213 yetM CH FAD binding domain
JGIIAPLE_04086 6.4e-90 yetL K helix_turn_helix multiple antibiotic resistance protein
JGIIAPLE_04087 1.3e-171 yetK EG EamA-like transporter family
JGIIAPLE_04088 5.3e-105 yetJ S Belongs to the BI1 family
JGIIAPLE_04089 8.9e-20 yezD S Uncharacterized small protein (DUF2292)
JGIIAPLE_04090 4.4e-43 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
JGIIAPLE_04091 4e-89 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
JGIIAPLE_04092 2e-64 yetH E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JGIIAPLE_04093 4.4e-55 isdI 1.14.99.48, 1.14.99.57 S Antibiotic biosynthesis monooxygenase
JGIIAPLE_04094 6.1e-123 yetF S membrane
JGIIAPLE_04095 3.3e-258 lplD 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
JGIIAPLE_04096 1.7e-162 lplC G Binding-protein-dependent transport system inner membrane component
JGIIAPLE_04097 1.3e-176 lplB G COG4209 ABC-type polysaccharide transport system, permease component
JGIIAPLE_04098 9.6e-291 lplA G Bacterial extracellular solute-binding protein
JGIIAPLE_04099 0.0 yetA
JGIIAPLE_04100 0.0 yesZ 3.2.1.23 G beta-galactosidase activity
JGIIAPLE_04101 3e-124 yesY E GDSL-like Lipase/Acylhydrolase
JGIIAPLE_04102 0.0 yesX 4.2.2.23, 4.2.2.24 PL11 E cell wall organization
JGIIAPLE_04103 0.0 yesX 4.2.2.23, 4.2.2.24 PL11 E cell wall organization
JGIIAPLE_04104 1e-113 yesV S Protein of unknown function, DUF624
JGIIAPLE_04105 8.9e-132 yesU S Domain of unknown function (DUF1961)
JGIIAPLE_04106 3.8e-133 E GDSL-like Lipase/Acylhydrolase
JGIIAPLE_04107 0.0 yesS K Transcriptional regulator
JGIIAPLE_04108 1.6e-199 3.2.1.172 GH105 S Glycosyl Hydrolase Family 88
JGIIAPLE_04109 1.3e-165 yesQ P Binding-protein-dependent transport system inner membrane component
JGIIAPLE_04110 2.8e-171 yesP G Binding-protein-dependent transport system inner membrane component
JGIIAPLE_04111 5e-248 yesO G Bacterial extracellular solute-binding protein
JGIIAPLE_04112 2.9e-204 yesN K helix_turn_helix, arabinose operon control protein
JGIIAPLE_04113 0.0 yesM 2.7.13.3 T Histidine kinase
JGIIAPLE_04114 4.4e-104 yesL S Protein of unknown function, DUF624
JGIIAPLE_04116 4.2e-103 yesJ K Acetyltransferase (GNAT) family
JGIIAPLE_04117 5.2e-104 cotJC P Spore Coat
JGIIAPLE_04118 1.5e-45 cotJB S CotJB protein
JGIIAPLE_04119 5.3e-45 cotJA S Spore coat associated protein JA (CotJA)
JGIIAPLE_04120 2.2e-159 yesF GM NAD(P)H-binding
JGIIAPLE_04121 9.7e-82 yesE S SnoaL-like domain
JGIIAPLE_04122 1.2e-103 dhaR3 K Transcriptional regulator
JGIIAPLE_04124 9.4e-127 yeeN K transcriptional regulatory protein
JGIIAPLE_04126 5.5e-214 S Tetratricopeptide repeat
JGIIAPLE_04127 1.8e-192 3.4.24.40 CO amine dehydrogenase activity
JGIIAPLE_04128 0.0 L nucleic acid phosphodiester bond hydrolysis
JGIIAPLE_04129 5.5e-83 S Protein of unknown function, DUF600
JGIIAPLE_04130 6.2e-31 S Colicin immunity protein / pyocin immunity protein
JGIIAPLE_04132 1.8e-212 pstS P T5orf172
JGIIAPLE_04133 0.0 yeeB L DEAD-like helicases superfamily
JGIIAPLE_04134 0.0 yeeA V Type II restriction enzyme, methylase subunits
JGIIAPLE_04135 3.2e-53 L Resolvase, N terminal domain
JGIIAPLE_04136 3.2e-98 L Recombinase
JGIIAPLE_04137 1.2e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JGIIAPLE_04138 3e-170 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
JGIIAPLE_04139 0.0 swrC V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JGIIAPLE_04140 4e-156 yerO K Transcriptional regulator
JGIIAPLE_04141 3.1e-270 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JGIIAPLE_04142 1.2e-274 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JGIIAPLE_04143 2.1e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JGIIAPLE_04144 2e-264 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JGIIAPLE_04145 1.6e-123 sapB S MgtC SapB transporter
JGIIAPLE_04146 1.1e-197 yerI S homoserine kinase type II (protein kinase fold)
JGIIAPLE_04147 4.1e-220 camS S COG4851 Protein involved in sex pheromone biosynthesis
JGIIAPLE_04148 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JGIIAPLE_04149 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
JGIIAPLE_04150 2.2e-125 pcrB I 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
JGIIAPLE_04152 3.2e-305 yerD 1.4.7.1 E Belongs to the glutamate synthase family
JGIIAPLE_04153 4.8e-51 yerC S protein conserved in bacteria
JGIIAPLE_04154 3e-192 yerB S Protein of unknown function (DUF3048) C-terminal domain
JGIIAPLE_04155 0.0 yerA 3.5.4.2 F adenine deaminase
JGIIAPLE_04156 2.7e-27 S Protein of unknown function (DUF2892)
JGIIAPLE_04157 2.3e-232 yjeH E Amino acid permease
JGIIAPLE_04158 3.5e-73 K helix_turn_helix ASNC type
JGIIAPLE_04159 1.7e-235 purD 6.3.4.13 F Belongs to the GARS family
JGIIAPLE_04160 1.2e-288 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
JGIIAPLE_04161 1.3e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JGIIAPLE_04162 7.6e-178 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
JGIIAPLE_04163 1.2e-271 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JGIIAPLE_04164 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JGIIAPLE_04165 5.1e-130 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JGIIAPLE_04166 2.9e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JGIIAPLE_04167 1.2e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
JGIIAPLE_04168 9.6e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JGIIAPLE_04169 7e-217 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JGIIAPLE_04170 2.5e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JGIIAPLE_04171 8e-28 yebG S NETI protein
JGIIAPLE_04172 4e-93 yebE S UPF0316 protein
JGIIAPLE_04174 1.1e-118 yebC M Membrane
JGIIAPLE_04175 6e-212 pbuG S permease
JGIIAPLE_04176 3.7e-306 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
JGIIAPLE_04177 0.0 yebA E COG1305 Transglutaminase-like enzymes
JGIIAPLE_04178 9.5e-225 yeaD S conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
JGIIAPLE_04179 1.6e-177 yeaC S COG0714 MoxR-like ATPases
JGIIAPLE_04180 7.6e-155 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JGIIAPLE_04181 2.6e-253 gabP E COG1113 Gamma-aminobutyrate permease and related permeases
JGIIAPLE_04182 0.0 cotA 1.10.3.4, 1.16.3.3 Q multicopper oxidases
JGIIAPLE_04183 2.4e-181 yeaA S Protein of unknown function (DUF4003)
JGIIAPLE_04184 9.5e-160 ydjP I Alpha/beta hydrolase family
JGIIAPLE_04185 1.4e-34 ydjO S Cold-inducible protein YdjO
JGIIAPLE_04187 4.4e-157 ydjN U Involved in the tonB-independent uptake of proteins
JGIIAPLE_04188 4.5e-64 ydjM M Lytic transglycolase
JGIIAPLE_04189 5.2e-195 bdhA 1.1.1.303, 1.1.1.4 E Dehydrogenase
JGIIAPLE_04190 2.7e-258 iolT EGP Major facilitator Superfamily
JGIIAPLE_04191 4.7e-196 S Ion transport 2 domain protein
JGIIAPLE_04192 1.4e-149 ydjI S virion core protein (lumpy skin disease virus)
JGIIAPLE_04193 1.6e-137 ydjH S COG1512 Beta-propeller domains of methanol dehydrogenase type
JGIIAPLE_04194 3.4e-178 ydjG 3.6.4.12 L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JGIIAPLE_04195 5.1e-114 pspA KT Phage shock protein A
JGIIAPLE_04196 1.5e-175 ydjE 2.7.1.4 G pfkB family carbohydrate kinase
JGIIAPLE_04197 7.1e-256 gutA G MFS/sugar transport protein
JGIIAPLE_04198 3.8e-201 gutB 1.1.1.14 E Dehydrogenase
JGIIAPLE_04199 0.0 K NB-ARC domain
JGIIAPLE_04200 1.1e-08 ydjC S Abhydrolase domain containing 18
JGIIAPLE_04201 4.9e-257 J LlaJI restriction endonuclease
JGIIAPLE_04202 1.2e-199 V AAA domain (dynein-related subfamily)
JGIIAPLE_04204 1.6e-232 ydiP 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
JGIIAPLE_04205 1.1e-250 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
JGIIAPLE_04206 6.4e-66 KL Phage plasmid primase P4 family
JGIIAPLE_04207 1.2e-281 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JGIIAPLE_04208 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JGIIAPLE_04209 7.9e-129 ydiL S CAAX protease self-immunity
JGIIAPLE_04210 2.9e-27 ydiK S Domain of unknown function (DUF4305)
JGIIAPLE_04211 8.4e-126 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JGIIAPLE_04212 7.5e-22 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
JGIIAPLE_04213 8.8e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JGIIAPLE_04214 5.5e-89 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
JGIIAPLE_04215 0.0 ydiF S ABC transporter
JGIIAPLE_04216 3.6e-188 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JGIIAPLE_04217 1.3e-84 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
JGIIAPLE_04218 9e-127 yeaZ 2.3.1.234 O COG1214 Inactive homolog of metal-dependent proteases
JGIIAPLE_04219 9.1e-86 ydiB 2.7.1.221, 5.1.1.1 S ATPase or kinase
JGIIAPLE_04220 4.6e-185 thiL 2.7.4.16 H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
JGIIAPLE_04223 9.1e-13 gtcA S GtrA-like protein
JGIIAPLE_04224 1.8e-10 msmE G Bacterial extracellular solute-binding protein
JGIIAPLE_04227 7.2e-12 dhbF IQ polyketide synthase
JGIIAPLE_04229 6.5e-11 dbpA 3.6.4.13 JKL DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
JGIIAPLE_04231 3.3e-09 tetL EGP Major facilitator Superfamily
JGIIAPLE_04232 1.3e-08 moeB 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
JGIIAPLE_04239 5.5e-11 yqbA S portal protein
JGIIAPLE_04242 6.7e-09 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JGIIAPLE_04247 1.5e-08 yfhP S membrane-bound metal-dependent
JGIIAPLE_04248 5.8e-08 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JGIIAPLE_04251 2.8e-10 murE 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JGIIAPLE_04254 1.2e-07 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
JGIIAPLE_04256 4.7e-16 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JGIIAPLE_04257 4.3e-275 dacC 3.4.16.4 M D-alanyl-D-alanine carboxypeptidase
JGIIAPLE_04258 6e-193 yoxA 5.1.3.3 G Aldose 1-epimerase
JGIIAPLE_04259 2.3e-246 yoeA V MATE efflux family protein
JGIIAPLE_04260 1.1e-98 yoeB S IseA DL-endopeptidase inhibitor
JGIIAPLE_04262 2.2e-96 L Integrase
JGIIAPLE_04263 3e-34 yoeD G Helix-turn-helix domain
JGIIAPLE_04264 0.0 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
JGIIAPLE_04265 2.5e-158 gltR1 K Transcriptional regulator
JGIIAPLE_04266 5e-187 yogA C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
JGIIAPLE_04267 2.7e-293 gltD 1.4.1.13, 1.4.1.14 E COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
JGIIAPLE_04268 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase
JGIIAPLE_04269 7.8e-155 gltC K Transcriptional regulator
JGIIAPLE_04270 4.1e-206 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JGIIAPLE_04271 2.5e-144 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JGIIAPLE_04272 1.9e-59 rtp K Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
JGIIAPLE_04273 2.2e-123 fabG 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JGIIAPLE_04274 3e-42 yoxC S Bacterial protein of unknown function (DUF948)
JGIIAPLE_04275 3.1e-144 yoxB
JGIIAPLE_04276 7.5e-97 yoaA 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
JGIIAPLE_04277 6.2e-235 yoaB EGP Major facilitator Superfamily
JGIIAPLE_04278 1e-284 yoaC 2.7.1.12, 2.7.1.17, 2.7.1.189, 2.7.1.5 G FGGY family of carbohydrate kinases, C-terminal domain
JGIIAPLE_04279 1.7e-190 yoaD 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JGIIAPLE_04280 0.0 yoaE C belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JGIIAPLE_04281 1.9e-33 yoaF
JGIIAPLE_04282 2.2e-08 ywlA S Uncharacterised protein family (UPF0715)
JGIIAPLE_04283 7e-14
JGIIAPLE_04284 1.5e-38 S Protein of unknown function (DUF4025)
JGIIAPLE_04285 1.7e-187 mcpU NT methyl-accepting chemotaxis protein
JGIIAPLE_04286 8.7e-281 hpaB 1.14.14.9 Q COG2368 Aromatic ring hydroxylase
JGIIAPLE_04287 3.8e-133 yoaJ G Endoglucanase C-terminal domain subunit and related proteins
JGIIAPLE_04288 2.3e-111 yoaK S Membrane
JGIIAPLE_04289 2.3e-198 pelB 4.2.2.10, 4.2.2.2 G Amb_all
JGIIAPLE_04290 1.1e-132 yoqW S Belongs to the SOS response-associated peptidase family
JGIIAPLE_04292 3.8e-234 oxdC 4.1.1.2 G Oxalate decarboxylase
JGIIAPLE_04294 1.5e-146 yoaP 3.1.3.18 K YoaP-like
JGIIAPLE_04295 1.2e-66 yoaQ S Evidence 4 Homologs of previously reported genes of
JGIIAPLE_04296 4.1e-89
JGIIAPLE_04297 2.4e-172 yoaR V vancomycin resistance protein
JGIIAPLE_04298 4.3e-75 yoaS S Protein of unknown function (DUF2975)
JGIIAPLE_04299 4.2e-37 yozG K Transcriptional regulator
JGIIAPLE_04300 1.1e-149 yoaT S Protein of unknown function (DUF817)
JGIIAPLE_04301 8.6e-159 yoaU K LysR substrate binding domain
JGIIAPLE_04302 6e-160 yijE EG EamA-like transporter family
JGIIAPLE_04303 3.7e-78 yoaW
JGIIAPLE_04304 1.1e-118 yoaZ 1.11.1.6, 3.5.1.124 S DJ-1/PfpI family
JGIIAPLE_04305 2.3e-170 bla 3.5.2.6 V beta-lactamase
JGIIAPLE_04309 0.0 pps 2.7.9.2 GT phosphoenolpyruvate synthase
JGIIAPLE_04310 1.8e-121 xlnB 3.2.1.8 G Glycosyl hydrolases family 11
JGIIAPLE_04311 1.4e-37 S TM2 domain
JGIIAPLE_04312 5.7e-58 K Helix-turn-helix
JGIIAPLE_04314 1.6e-69 yoaQ S Evidence 4 Homologs of previously reported genes of
JGIIAPLE_04315 6.6e-127 yoqW S Belongs to the SOS response-associated peptidase family
JGIIAPLE_04316 1.8e-178 yobF
JGIIAPLE_04321 1.7e-207 S aspartate phosphatase
JGIIAPLE_04323 1.2e-123 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JGIIAPLE_04324 1.4e-59 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JGIIAPLE_04325 2.6e-38 S YolD-like protein
JGIIAPLE_04326 1.2e-49
JGIIAPLE_04327 0.0 K Psort location Cytoplasmic, score
JGIIAPLE_04328 2.7e-157 yobJ
JGIIAPLE_04329 3e-86 S SMI1-KNR4 cell-wall
JGIIAPLE_04330 0.0 L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
JGIIAPLE_04331 7.9e-105 yokH G SMI1 / KNR4 family
JGIIAPLE_04332 9.5e-280 iaaM 1.4.3.4 E COG1231 Monoamine oxidase
JGIIAPLE_04333 0.0 yobO M Pectate lyase superfamily protein
JGIIAPLE_04334 9.9e-55 csaA 6.1.1.10, 6.1.1.20, 6.1.1.6 J tRNA-binding protein
JGIIAPLE_04335 2.7e-137 yobQ K helix_turn_helix, arabinose operon control protein
JGIIAPLE_04336 2.5e-143 yobR 2.3.1.1 J FR47-like protein
JGIIAPLE_04337 3e-99 yobS K Transcriptional regulator
JGIIAPLE_04338 4.2e-132 yobT S COG0491 Zn-dependent hydrolases, including glyoxylases
JGIIAPLE_04339 1.5e-88 yobU K Bacterial transcription activator, effector binding domain
JGIIAPLE_04340 9e-178 yobV K WYL domain
JGIIAPLE_04341 2.5e-95 yobW
JGIIAPLE_04342 1e-51 czrA K transcriptional
JGIIAPLE_04343 4.4e-118 pvaA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
JGIIAPLE_04344 1.5e-92 yozB S membrane
JGIIAPLE_04345 2.2e-145
JGIIAPLE_04346 1.9e-94 yocC
JGIIAPLE_04347 6.9e-189 yocD 3.4.17.13 V peptidase S66
JGIIAPLE_04348 4.1e-203 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
JGIIAPLE_04349 3.2e-198 desK 2.7.13.3 T Histidine kinase
JGIIAPLE_04350 1e-105 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JGIIAPLE_04351 7.1e-113 yocH CBM50 M COG1388 FOG LysM repeat
JGIIAPLE_04352 0.0 recQ 3.6.4.12 L DNA helicase
JGIIAPLE_04353 7.9e-114 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
JGIIAPLE_04354 3.3e-83 dksA T general stress protein
JGIIAPLE_04355 6.4e-54 yocL
JGIIAPLE_04356 6.6e-34
JGIIAPLE_04357 1.3e-87 yocM O Belongs to the small heat shock protein (HSP20) family
JGIIAPLE_04358 1.1e-40 yozN
JGIIAPLE_04359 1.9e-36 yocN
JGIIAPLE_04360 4.2e-56 yozO S Bacterial PH domain
JGIIAPLE_04361 2.7e-31 yozC
JGIIAPLE_04362 4e-289 dhaS 1.2.1.3, 1.2.1.39 C Belongs to the aldehyde dehydrogenase family
JGIIAPLE_04363 0.0 sqhC 4.2.1.137, 5.4.99.7 I COG1657 Squalene cyclase
JGIIAPLE_04364 5.4e-166 sodA 1.15.1.1 P Superoxide dismutase
JGIIAPLE_04365 3.4e-231 yocR S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
JGIIAPLE_04366 5.1e-168 yocS S -transporter
JGIIAPLE_04367 1.8e-194 sucB 2.3.1.61 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
JGIIAPLE_04368 0.0 sucA 1.2.4.2, 4.1.1.71 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
JGIIAPLE_04369 0.0 yojO P Von Willebrand factor
JGIIAPLE_04370 1.1e-161 yojN S ATPase family associated with various cellular activities (AAA)
JGIIAPLE_04371 1e-110 sodC 1.15.1.1 P Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JGIIAPLE_04372 1.6e-198 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
JGIIAPLE_04373 1.8e-231 yojK CG UDP-glucoronosyl and UDP-glucosyl transferase
JGIIAPLE_04374 1.2e-109 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JGIIAPLE_04376 4.2e-245 norM V Multidrug efflux pump
JGIIAPLE_04377 8.4e-151 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
JGIIAPLE_04378 2.1e-125 yojG S deacetylase
JGIIAPLE_04379 2.2e-60 yojF S Protein of unknown function (DUF1806)
JGIIAPLE_04380 1.5e-43
JGIIAPLE_04381 3.5e-163 rarD S -transporter
JGIIAPLE_04382 2.6e-61 yozR S COG0071 Molecular chaperone (small heat shock protein)
JGIIAPLE_04383 3.4e-09
JGIIAPLE_04384 8.2e-209 gntP EG COG2610 H gluconate symporter and related permeases
JGIIAPLE_04385 3.8e-66 yodA S tautomerase
JGIIAPLE_04386 1.7e-57 yodB K transcriptional
JGIIAPLE_04387 4.8e-108 yodC C nitroreductase
JGIIAPLE_04388 3.8e-113 mhqD S Carboxylesterase
JGIIAPLE_04389 5.8e-174 yodE E COG0346 Lactoylglutathione lyase and related lyases
JGIIAPLE_04390 6.2e-28 S Protein of unknown function (DUF3311)
JGIIAPLE_04391 4.2e-270 yodF E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JGIIAPLE_04392 1.9e-253 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
JGIIAPLE_04393 1.7e-128 yodH Q Methyltransferase
JGIIAPLE_04394 5.2e-24 yodI
JGIIAPLE_04395 2.5e-139 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
JGIIAPLE_04396 3.2e-127 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
JGIIAPLE_04397 5.3e-09
JGIIAPLE_04398 3.6e-54 yodL S YodL-like
JGIIAPLE_04399 5.4e-107 yodM 3.6.1.27 I Acid phosphatase homologues
JGIIAPLE_04400 2.8e-24 yozD S YozD-like protein
JGIIAPLE_04402 1.4e-124 yodN
JGIIAPLE_04403 1.4e-36 yozE S Belongs to the UPF0346 family
JGIIAPLE_04404 2.9e-47 yokU S YokU-like protein, putative antitoxin
JGIIAPLE_04405 1.4e-278 kamA 5.4.3.2 E lysine 2,3-aminomutase
JGIIAPLE_04406 2.5e-155 yodP 2.3.1.264 K Acetyltransferase (GNAT) family
JGIIAPLE_04407 1.4e-258 yodQ 3.5.1.16 E Acetylornithine deacetylase
JGIIAPLE_04408 1.6e-117 scoB 2.8.3.5, 2.8.3.8, 2.8.3.9 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
JGIIAPLE_04409 8.1e-10 yodS 2.8.3.8, 2.8.3.9 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JGIIAPLE_04410 1.6e-249 yodT H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JGIIAPLE_04412 2.9e-145 yiiD K acetyltransferase
JGIIAPLE_04413 1e-256 cgeD M maturation of the outermost layer of the spore
JGIIAPLE_04414 3.5e-38 cgeC
JGIIAPLE_04415 1.2e-65 cgeA
JGIIAPLE_04416 3.3e-188 cgeB S Spore maturation protein
JGIIAPLE_04417 3.6e-213 phy 3.1.3.8 I Myo-inositol-hexaphosphate 3-phosphohydrolase
JGIIAPLE_04418 2.5e-63 4.2.1.115 GM Polysaccharide biosynthesis protein
JGIIAPLE_04420 3.6e-108 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
JGIIAPLE_04421 1.4e-10 K Cro/C1-type HTH DNA-binding domain
JGIIAPLE_04429 1.9e-168 S Calcineurin-like phosphoesterase
JGIIAPLE_04430 2.5e-30 sspB S spore protein
JGIIAPLE_04435 8.9e-83 yosT L Bacterial transcription activator, effector binding domain
JGIIAPLE_04436 2.4e-77 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
JGIIAPLE_04437 6.1e-38 O Glutaredoxin
JGIIAPLE_04438 2.8e-66 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JGIIAPLE_04439 3.3e-97 L HNH endonuclease
JGIIAPLE_04440 1e-107 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JGIIAPLE_04441 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JGIIAPLE_04442 2.3e-117 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JGIIAPLE_04443 5.1e-66 nrdI 1.17.4.1 F Probably involved in ribonucleotide reductase function
JGIIAPLE_04460 1.5e-255 dcm 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
JGIIAPLE_04462 1.2e-96 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
JGIIAPLE_04463 5.9e-88 tmk 2.1.1.45, 2.7.4.9 F dTDP biosynthetic process
JGIIAPLE_04468 9.9e-115 DR0488 S protein conserved in bacteria
JGIIAPLE_04469 0.0 2.7.7.7 L DNA polymerase
JGIIAPLE_04470 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
JGIIAPLE_04471 1.2e-224 L DNA primase activity
JGIIAPLE_04472 3.6e-285 3.6.4.12 J DnaB-like helicase C terminal domain
JGIIAPLE_04473 1.4e-86
JGIIAPLE_04474 7.6e-180 L AAA domain
JGIIAPLE_04475 1.3e-170
JGIIAPLE_04480 0.0 M Parallel beta-helix repeats
JGIIAPLE_04481 7.7e-149 S Pfam:DUF867
JGIIAPLE_04484 1e-130 yoqW S Belongs to the SOS response-associated peptidase family
JGIIAPLE_04485 2.4e-155 ligB 6.5.1.1, 6.5.1.6, 6.5.1.7 L ATP-dependent DNA ligase
JGIIAPLE_04486 2.3e-77
JGIIAPLE_04493 1e-44
JGIIAPLE_04495 1.5e-97 S Protein of unknown function (DUF1273)
JGIIAPLE_04497 3e-78 yoqH M LysM domain
JGIIAPLE_04500 8.8e-12 S Protein of unknown function (DUF2815)
JGIIAPLE_04501 6.2e-137 kilA S Phage regulatory protein Rha (Phage_pRha)
JGIIAPLE_04512 1.1e-33 K Transcriptional regulator
JGIIAPLE_04513 2.1e-177
JGIIAPLE_04514 6e-263 S DNA-sulfur modification-associated
JGIIAPLE_04515 6.8e-198 L Belongs to the 'phage' integrase family
JGIIAPLE_04520 6.6e-106
JGIIAPLE_04522 1.2e-86
JGIIAPLE_04523 1.1e-96 S Super-infection exclusion protein B
JGIIAPLE_04528 1.1e-07 ywlA S Uncharacterised protein family (UPF0715)
JGIIAPLE_04529 3.8e-259
JGIIAPLE_04530 4.6e-35 K Cro/C1-type HTH DNA-binding domain
JGIIAPLE_04531 1.4e-256
JGIIAPLE_04533 5.9e-238
JGIIAPLE_04535 4e-17
JGIIAPLE_04536 5.7e-55 bldD K domain, Protein
JGIIAPLE_04539 0.0
JGIIAPLE_04540 1.8e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JGIIAPLE_04542 2.6e-230
JGIIAPLE_04545 1.8e-175
JGIIAPLE_04546 0.0 gp17a S Terminase-like family
JGIIAPLE_04547 6.3e-282
JGIIAPLE_04548 2.1e-266
JGIIAPLE_04549 1.6e-94
JGIIAPLE_04550 5.7e-186
JGIIAPLE_04551 5.1e-81
JGIIAPLE_04552 1.1e-68
JGIIAPLE_04554 1.4e-121
JGIIAPLE_04555 2.6e-91
JGIIAPLE_04556 8.1e-131
JGIIAPLE_04557 1.6e-90
JGIIAPLE_04560 1e-57
JGIIAPLE_04561 1.1e-172
JGIIAPLE_04562 8.1e-07
JGIIAPLE_04563 2.5e-10 xkdX
JGIIAPLE_04564 2.5e-86
JGIIAPLE_04565 6.3e-70
JGIIAPLE_04566 2.1e-193 xerH A Belongs to the 'phage' integrase family
JGIIAPLE_04574 5.3e-14 qoxB 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JGIIAPLE_04576 3.7e-14 yceB C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JGIIAPLE_04578 7.1e-09 flgK N flagellar hook-associated protein
JGIIAPLE_04581 5.2e-15 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
JGIIAPLE_04582 1.9e-08 ywqB S SWIM zinc finger
JGIIAPLE_04583 5.2e-10 ydbB G Cupin domain
JGIIAPLE_04585 5.6e-08 ybhK S Required for morphogenesis under gluconeogenic growth conditions
JGIIAPLE_04587 1.9e-11 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JGIIAPLE_04591 2.7e-10 ybeC E amino acid
JGIIAPLE_04593 1.4e-10 yjcA S Protein of unknown function (DUF1360)
JGIIAPLE_04594 7.8e-18 argE 3.5.1.16 E Acetylornithine deacetylase
JGIIAPLE_04603 1.4e-112 ydeA 1.11.1.6, 3.5.1.124 S DJ-1/PfpI family
JGIIAPLE_04604 8.7e-30 cspL K Cold shock
JGIIAPLE_04605 6.1e-79 carD K Transcription factor
JGIIAPLE_04606 4.6e-35 ydzE EG spore germination
JGIIAPLE_04607 1.1e-166 rhaS5 K AraC-like ligand binding domain
JGIIAPLE_04608 2.3e-173 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
JGIIAPLE_04609 2.5e-166 ydeE K AraC family transcriptional regulator
JGIIAPLE_04610 2.2e-265 K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
JGIIAPLE_04611 3.4e-220 ydeG EGP Major facilitator superfamily
JGIIAPLE_04612 2.9e-47 ydeH
JGIIAPLE_04613 8.9e-107 ydeI S Bacteriocin-protection, YdeI or OmpD-Associated
JGIIAPLE_04614 4e-116
JGIIAPLE_04615 1.8e-153 ydeK EG -transporter
JGIIAPLE_04616 1.5e-274 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
JGIIAPLE_04617 4.2e-74 maoC I N-terminal half of MaoC dehydratase
JGIIAPLE_04618 8.6e-107 ydeN S Serine hydrolase
JGIIAPLE_04619 1.1e-58 K HxlR-like helix-turn-helix
JGIIAPLE_04620 1.9e-153 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
JGIIAPLE_04621 4.8e-69 ydeP K Transcriptional regulator
JGIIAPLE_04622 1.6e-108 ydeQ S NADPH-quinone reductase (modulator of drug activity B)
JGIIAPLE_04623 1.2e-195 ydeR EGP Major facilitator Superfamily
JGIIAPLE_04624 8.4e-105 ydeS K Transcriptional regulator
JGIIAPLE_04625 1.3e-57 arsR K transcriptional
JGIIAPLE_04626 5.2e-232 arsB P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JGIIAPLE_04627 7.2e-149 ydfB J GNAT acetyltransferase
JGIIAPLE_04628 1e-162 ydfC EG EamA-like transporter family
JGIIAPLE_04629 1.9e-275 ydfD K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
JGIIAPLE_04630 5.9e-117 ydfE S Flavin reductase like domain
JGIIAPLE_04631 2.7e-123 ydfF K helix_turn_helix, Arsenical Resistance Operon Repressor
JGIIAPLE_04632 1.5e-79 ydfG S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JGIIAPLE_04634 5.3e-180 ydfH 2.7.13.3 T Histidine kinase
JGIIAPLE_04635 1.4e-110 ydfI K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JGIIAPLE_04636 0.0 ydfJ S drug exporters of the RND superfamily
JGIIAPLE_04637 1.9e-177 S Alpha/beta hydrolase family
JGIIAPLE_04638 5.9e-118 S Protein of unknown function (DUF554)
JGIIAPLE_04639 3.2e-147 K Bacterial transcription activator, effector binding domain
JGIIAPLE_04640 1.6e-155 fieF P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JGIIAPLE_04641 9.6e-112 ydfN C nitroreductase
JGIIAPLE_04642 3.6e-187 ydfO E COG0346 Lactoylglutathione lyase and related lyases
JGIIAPLE_04643 8.8e-63 mhqP S DoxX
JGIIAPLE_04644 1.3e-57 traF CO Thioredoxin
JGIIAPLE_04645 7.1e-15 ydgA S Spore germination protein gerPA/gerPF
JGIIAPLE_04646 6.3e-29
JGIIAPLE_04648 4.4e-118 ydfR S Protein of unknown function (DUF421)
JGIIAPLE_04649 5.2e-122 ydfS S Protein of unknown function (DUF421)
JGIIAPLE_04650 1.7e-75 cotP O Belongs to the small heat shock protein (HSP20) family
JGIIAPLE_04651 1.4e-37 ydgA S Spore germination protein gerPA/gerPF
JGIIAPLE_04652 1.3e-41 ydgB S Spore germination protein gerPA/gerPF
JGIIAPLE_04653 1.5e-101 K Bacterial regulatory proteins, tetR family
JGIIAPLE_04654 1.9e-53 S DoxX-like family
JGIIAPLE_04655 2.4e-86 yycN 2.3.1.128 K Acetyltransferase
JGIIAPLE_04656 4.2e-308 expZ S ABC transporter
JGIIAPLE_04657 4e-251 cycA E COG1113 Gamma-aminobutyrate permease and related permeases
JGIIAPLE_04658 4.6e-91 dinB S DinB family
JGIIAPLE_04659 4.7e-80 K helix_turn_helix multiple antibiotic resistance protein
JGIIAPLE_04660 0.0 ydgH S drug exporters of the RND superfamily
JGIIAPLE_04661 1e-113 drgA C nitroreductase
JGIIAPLE_04662 1.1e-69 ydgJ K Winged helix DNA-binding domain
JGIIAPLE_04663 2.5e-209 tcaB EGP Major facilitator Superfamily
JGIIAPLE_04664 1.2e-121 ydhB S membrane transporter protein
JGIIAPLE_04665 6.5e-122 ydhC K FCD
JGIIAPLE_04666 3.3e-244 ydhD M Glycosyl hydrolase
JGIIAPLE_04667 7e-228 ydhE CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
JGIIAPLE_04668 1.9e-127
JGIIAPLE_04669 1.4e-259 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
JGIIAPLE_04670 4.6e-69 frataxin S Domain of unknown function (DU1801)
JGIIAPLE_04672 4.1e-86 K Acetyltransferase (GNAT) domain
JGIIAPLE_04673 1.8e-184 ydhJ S Metal dependent phosphohydrolases with conserved 'HD' motif.
JGIIAPLE_04674 1.7e-99 ydhK M Protein of unknown function (DUF1541)
JGIIAPLE_04675 4.6e-200 pbuE EGP Major facilitator Superfamily
JGIIAPLE_04676 1.1e-47 ydhM 2.7.1.196, 2.7.1.205 G phosphotransferase system
JGIIAPLE_04677 3.5e-52 ydhN3 2.7.1.196, 2.7.1.205 G phosphotransferase system
JGIIAPLE_04678 2e-239 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JGIIAPLE_04679 2.4e-288 ydhP 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JGIIAPLE_04680 3.9e-133 ydhQ K UTRA
JGIIAPLE_04681 9.2e-172 gmuE 2.7.1.2, 2.7.1.4 GK COG1940 Transcriptional regulator sugar kinase
JGIIAPLE_04682 4.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
JGIIAPLE_04683 7.3e-216 gmuG 3.2.1.78 GH26 G Belongs to the glycosyl hydrolase 26 family
JGIIAPLE_04684 8.7e-78 ydhU P Catalase
JGIIAPLE_04685 1.1e-16 ydhU P Manganese containing catalase
JGIIAPLE_04688 2.5e-12 ybaC 3.4.11.5 S Alpha/beta hydrolase family
JGIIAPLE_04689 5.7e-12 ftsI 3.4.16.4 M Penicillin-binding Protein
JGIIAPLE_04691 4.8e-23 yngA S membrane
JGIIAPLE_04694 9.8e-10 wapA M COG3209 Rhs family protein
JGIIAPLE_04698 7.6e-17 fliH NU COG1317 Flagellar biosynthesis type III secretory pathway protein
JGIIAPLE_04699 2.7e-11 yhdW 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
JGIIAPLE_04703 2.1e-10 flgL N Belongs to the bacterial flagellin family
JGIIAPLE_04706 4.1e-12 bpr O COG1404 Subtilisin-like serine proteases
JGIIAPLE_04707 1e-09 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JGIIAPLE_04708 3.4e-16 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JGIIAPLE_04710 2e-14 mdxE G COG2182 Maltose-binding periplasmic proteins domains
JGIIAPLE_04711 6.4e-15 qoxC 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
JGIIAPLE_04712 8.9e-10 ywhC S Peptidase family M50
JGIIAPLE_04714 2.8e-07 yerI S homoserine kinase type II (protein kinase fold)
JGIIAPLE_04720 1.3e-10 alkH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
JGIIAPLE_04728 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JGIIAPLE_04729 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JGIIAPLE_04730 1.8e-37 yaaB S Domain of unknown function (DUF370)
JGIIAPLE_04731 1.4e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JGIIAPLE_04732 2.4e-33 yaaA S S4 domain
JGIIAPLE_04733 6.1e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JGIIAPLE_04734 6e-252 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JGIIAPLE_04735 3e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
JGIIAPLE_04736 1.7e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JGIIAPLE_04737 6.5e-108 jag S single-stranded nucleic acid binding R3H
JGIIAPLE_04738 3.1e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JGIIAPLE_04739 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
JGIIAPLE_04740 2.2e-131 rsmG 2.1.1.170 J Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
JGIIAPLE_04741 1.9e-150 noc D Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
JGIIAPLE_04742 1.5e-74 S Bacterial PH domain
JGIIAPLE_04743 2.2e-134 soj D COG1192 ATPases involved in chromosome partitioning
JGIIAPLE_04744 2.1e-149 spo0J K Belongs to the ParB family
JGIIAPLE_04745 1.6e-111 yyaC S Sporulation protein YyaC
JGIIAPLE_04746 8.1e-177 yyaD S Membrane
JGIIAPLE_04747 2.3e-33 yyzM S protein conserved in bacteria
JGIIAPLE_04748 0.0 yyaE C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JGIIAPLE_04749 4e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JGIIAPLE_04750 4.3e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
JGIIAPLE_04751 2.9e-69 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JGIIAPLE_04752 5.1e-37 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JGIIAPLE_04753 8.1e-145 xth 3.1.11.2 L exodeoxyribonuclease III
JGIIAPLE_04754 3.3e-180 ccpB 3.5.1.4, 5.1.1.1 K Transcriptional regulator
JGIIAPLE_04755 4e-68 yyaH 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JGIIAPLE_04756 5.1e-96 maa 2.3.1.79 S Bacterial transferase hexapeptide (six repeats)
JGIIAPLE_04757 3.8e-246 EGP Major facilitator superfamily
JGIIAPLE_04758 9.5e-169 yyaK S CAAX protease self-immunity
JGIIAPLE_04759 0.0 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
JGIIAPLE_04760 3.3e-161 yyaM EG EamA-like transporter family
JGIIAPLE_04761 5.1e-61 yyaN K MerR HTH family regulatory protein
JGIIAPLE_04762 9.7e-44 yyaL O Highly conserved protein containing a thioredoxin domain
JGIIAPLE_04763 1.7e-249 tetL EGP Major facilitator Superfamily
JGIIAPLE_04764 1.7e-107 yyaP 1.5.1.3 H RibD C-terminal domain
JGIIAPLE_04765 5.4e-67 yyaQ S YjbR
JGIIAPLE_04766 5.4e-100 yyaR K Acetyltransferase (GNAT) domain
JGIIAPLE_04767 1.5e-101 yyaS S Membrane
JGIIAPLE_04768 5.9e-79 yjcF S Acetyltransferase (GNAT) domain
JGIIAPLE_04769 5.6e-77 yybA 2.3.1.57 K transcriptional
JGIIAPLE_04770 3e-127 S Metallo-beta-lactamase superfamily
JGIIAPLE_04771 2.7e-77 yybC
JGIIAPLE_04772 2e-79 yjcF S Acetyltransferase (GNAT) domain
JGIIAPLE_04773 2.1e-165 yybE K Transcriptional regulator
JGIIAPLE_04774 3.2e-220 ynfM EGP Major facilitator Superfamily
JGIIAPLE_04775 3e-124 yybG S Pentapeptide repeat-containing protein
JGIIAPLE_04776 5.9e-67 yybH S SnoaL-like domain
JGIIAPLE_04777 6.2e-132
JGIIAPLE_04778 2.6e-115 V ATPases associated with a variety of cellular activities
JGIIAPLE_04779 2e-127 S Protein of unknown function (DUF2705)
JGIIAPLE_04780 9e-122
JGIIAPLE_04781 4.1e-125
JGIIAPLE_04782 1.3e-78 yybN S Protein of unknown function (DUF2712)
JGIIAPLE_04783 1e-16
JGIIAPLE_04784 2.3e-240 yybO G COG0477 Permeases of the major facilitator superfamily
JGIIAPLE_04786 1.3e-70
JGIIAPLE_04787 1.1e-164 ppaC 3.6.1.1 C Inorganic pyrophosphatase
JGIIAPLE_04788 1.4e-68 ydeP3 K Transcriptional regulator
JGIIAPLE_04789 3.9e-84 cotF M Spore coat protein
JGIIAPLE_04791 2.9e-160 yybS S membrane
JGIIAPLE_04792 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
JGIIAPLE_04793 2.2e-73 rplI J binds to the 23S rRNA
JGIIAPLE_04794 0.0 yycA M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JGIIAPLE_04795 8.4e-221 yeaN P COG2807 Cyanate permease
JGIIAPLE_04796 1.9e-15 yycC K YycC-like protein
JGIIAPLE_04798 1.9e-29 yycD S Uncharacterized protein conserved in bacteria (DUF2188)
JGIIAPLE_04799 3e-251 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
JGIIAPLE_04800 8e-78 yycE 3.4.21.26, 5.3.1.24 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JGIIAPLE_04801 1.7e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JGIIAPLE_04806 2.8e-07 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGIIAPLE_04809 3.9e-11 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JGIIAPLE_04821 2e-16 yvgK P COG1910 Periplasmic molybdate-binding protein domain
JGIIAPLE_04822 6.2e-09 yveA E amino acid
JGIIAPLE_04826 2.4e-10 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JGIIAPLE_04828 5e-09 yvrC P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
JGIIAPLE_04830 5.7e-09 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
JGIIAPLE_04831 2.3e-11 ysoA H Tetratricopeptide repeat
JGIIAPLE_04834 6.2e-11 yitS S protein conserved in bacteria
JGIIAPLE_04838 3.6e-18 ydjN U Involved in the tonB-independent uptake of proteins
JGIIAPLE_04840 2.3e-13 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JGIIAPLE_04842 9.9e-11 T PhoQ Sensor
JGIIAPLE_04843 6.7e-11 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JGIIAPLE_04845 1.2e-140 pdaB 3.5.1.104 G Polysaccharide deacetylase
JGIIAPLE_04846 1.3e-102 kbaA 2.7.8.43 S Involved in the activation of the KinB signaling pathway of sporulation
JGIIAPLE_04847 1.2e-84 gerD
JGIIAPLE_04848 1.4e-198 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
JGIIAPLE_04849 1.1e-132 cwlD 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
JGIIAPLE_04850 9.7e-66 ybaK S Protein of unknown function (DUF2521)
JGIIAPLE_04851 8.2e-145 ybaJ Q Methyltransferase domain
JGIIAPLE_04852 4.7e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
JGIIAPLE_04853 6.4e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JGIIAPLE_04854 2.8e-142 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JGIIAPLE_04855 4.7e-119 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JGIIAPLE_04856 1.7e-154 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JGIIAPLE_04857 5.1e-156 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JGIIAPLE_04858 3.6e-58 rplQ J Ribosomal protein L17
JGIIAPLE_04859 3.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGIIAPLE_04860 2.1e-64 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JGIIAPLE_04861 3.1e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JGIIAPLE_04862 4.2e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
JGIIAPLE_04863 1.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JGIIAPLE_04864 3.7e-142 map 3.4.11.18 E Methionine aminopeptidase
JGIIAPLE_04865 5.7e-123 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JGIIAPLE_04866 4.2e-234 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JGIIAPLE_04867 1.8e-72 rplO J binds to the 23S rRNA
JGIIAPLE_04868 1.9e-23 rpmD J Ribosomal protein L30
JGIIAPLE_04869 3.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JGIIAPLE_04870 4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JGIIAPLE_04871 1.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JGIIAPLE_04872 3.9e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JGIIAPLE_04873 3.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JGIIAPLE_04874 4.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JGIIAPLE_04875 6.2e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JGIIAPLE_04876 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JGIIAPLE_04877 3.5e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JGIIAPLE_04878 1.7e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
JGIIAPLE_04879 1.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JGIIAPLE_04880 6.2e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JGIIAPLE_04881 4.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JGIIAPLE_04882 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JGIIAPLE_04883 1.5e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JGIIAPLE_04884 1.2e-43 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JGIIAPLE_04885 3e-105 rplD J Forms part of the polypeptide exit tunnel
JGIIAPLE_04886 6.3e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JGIIAPLE_04887 7.5e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
JGIIAPLE_04888 9.1e-186 ybaC 3.4.11.5 S Alpha/beta hydrolase family
JGIIAPLE_04889 2.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JGIIAPLE_04890 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JGIIAPLE_04891 6e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JGIIAPLE_04892 8.5e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JGIIAPLE_04893 8e-33 ybxF J Belongs to the eukaryotic ribosomal protein eL8 family
JGIIAPLE_04894 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGIIAPLE_04895 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JGIIAPLE_04896 8.2e-108 rsmC 2.1.1.172 J Methyltransferase
JGIIAPLE_04897 1.3e-42 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JGIIAPLE_04898 5.1e-79 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JGIIAPLE_04899 1.1e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JGIIAPLE_04900 2.8e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JGIIAPLE_04901 5.2e-96 nusG K Participates in transcription elongation, termination and antitermination
JGIIAPLE_04902 1e-21 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
JGIIAPLE_04903 4.4e-115 sigH K Belongs to the sigma-70 factor family
JGIIAPLE_04904 1.2e-88 yacP S RNA-binding protein containing a PIN domain
JGIIAPLE_04905 1.2e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JGIIAPLE_04906 1e-72 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JGIIAPLE_04907 4.9e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
JGIIAPLE_04908 7.2e-118 cysE 2.3.1.30 E Serine acetyltransferase
JGIIAPLE_04909 1.9e-280 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JGIIAPLE_04910 3.1e-86 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
JGIIAPLE_04911 3.8e-125 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
JGIIAPLE_04912 2.7e-197 yacL S COG4956 Integral membrane protein (PIN domain superfamily)
JGIIAPLE_04913 1.3e-196 disA 2.7.7.85 L Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
JGIIAPLE_04914 9.6e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JGIIAPLE_04915 0.0 clpC O Belongs to the ClpA ClpB family
JGIIAPLE_04916 6.1e-202 mcsB 2.7.14.1, 2.7.3.2, 2.7.3.3 E Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
JGIIAPLE_04917 4.7e-47 mcsA 2.7.14.1 S protein with conserved CXXC pairs
JGIIAPLE_04918 2.9e-76 ctsR K Belongs to the CtsR family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)