ORF_ID e_value Gene_name EC_number CAZy COGs Description
JPOMOPHI_00001 9.1e-82
JPOMOPHI_00002 2.1e-23 L Transposase, Mutator family
JPOMOPHI_00003 1.3e-245 L Transposase
JPOMOPHI_00004 4.7e-137 L IstB-like ATP binding protein
JPOMOPHI_00005 1.3e-77 S CRISPR-associated protein (Cas_Csn2)
JPOMOPHI_00006 7.5e-126 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JPOMOPHI_00007 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JPOMOPHI_00008 1.4e-13
JPOMOPHI_00009 6e-266
JPOMOPHI_00010 1.1e-297 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
JPOMOPHI_00011 3.1e-57
JPOMOPHI_00012 3e-90 3.1.21.3 L PFAM restriction modification system DNA specificity domain
JPOMOPHI_00013 4.1e-178 V Abi-like protein
JPOMOPHI_00014 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
JPOMOPHI_00015 1.5e-58 S Bacterial mobilisation protein (MobC)
JPOMOPHI_00016 0.0 ltrBE1 U Relaxase/Mobilisation nuclease domain
JPOMOPHI_00017 5.9e-100
JPOMOPHI_00020 4.4e-259 L Phage integrase, N-terminal SAM-like domain
JPOMOPHI_00022 4.3e-55
JPOMOPHI_00023 1.5e-36 M F5/8 type C domain
JPOMOPHI_00024 2.2e-190 1.1.1.65 C Aldo/keto reductase family
JPOMOPHI_00025 9.2e-43 S Protein of unknown function (DUF1778)
JPOMOPHI_00026 5.9e-94 ydgJ K helix_turn_helix multiple antibiotic resistance protein
JPOMOPHI_00027 0.0 lmrA1 V ABC transporter, ATP-binding protein
JPOMOPHI_00028 0.0 lmrA2 V ABC transporter transmembrane region
JPOMOPHI_00030 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
JPOMOPHI_00031 1.3e-107 S Phosphatidylethanolamine-binding protein
JPOMOPHI_00032 0.0 pepD E Peptidase family C69
JPOMOPHI_00033 1.1e-286 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
JPOMOPHI_00034 3e-62 S Macrophage migration inhibitory factor (MIF)
JPOMOPHI_00035 1.5e-97 S GtrA-like protein
JPOMOPHI_00036 6.2e-263 EGP Major facilitator Superfamily
JPOMOPHI_00037 1.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
JPOMOPHI_00038 2.9e-141
JPOMOPHI_00039 1.4e-136 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
JPOMOPHI_00040 8.6e-201 P NMT1/THI5 like
JPOMOPHI_00041 7.1e-121 S HAD hydrolase, family IA, variant 3
JPOMOPHI_00043 4.5e-296 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JPOMOPHI_00044 6.3e-96 S Domain of unknown function (DUF4143)
JPOMOPHI_00045 3.3e-43 S Domain of unknown function (DUF4143)
JPOMOPHI_00048 4.1e-250 S Calcineurin-like phosphoesterase
JPOMOPHI_00049 2.8e-138 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
JPOMOPHI_00050 1.1e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JPOMOPHI_00051 3.8e-133 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JPOMOPHI_00052 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
JPOMOPHI_00054 1.9e-182 S CAAX protease self-immunity
JPOMOPHI_00055 6.8e-220 pyrD 1.3.1.14 F Dihydroorotate dehydrogenase
JPOMOPHI_00056 9.8e-255 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JPOMOPHI_00057 7.4e-226 G Transmembrane secretion effector
JPOMOPHI_00058 7.3e-132 K Bacterial regulatory proteins, tetR family
JPOMOPHI_00059 2.2e-128
JPOMOPHI_00060 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JPOMOPHI_00061 6.1e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JPOMOPHI_00062 8.3e-166 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
JPOMOPHI_00063 7.1e-187
JPOMOPHI_00064 7.9e-180
JPOMOPHI_00065 3.8e-163 trxA2 O Tetratricopeptide repeat
JPOMOPHI_00066 2.8e-119 cyaA 4.6.1.1 S CYTH
JPOMOPHI_00068 1.4e-184 K Bacterial regulatory proteins, lacI family
JPOMOPHI_00069 1e-16 4.2.1.68 M carboxylic acid catabolic process
JPOMOPHI_00070 3.2e-64 4.2.1.68 M Enolase C-terminal domain-like
JPOMOPHI_00071 1.2e-15 IQ KR domain
JPOMOPHI_00072 1.4e-135 IQ KR domain
JPOMOPHI_00074 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
JPOMOPHI_00075 2e-62 psp1 3.5.99.10 J Endoribonuclease L-PSP
JPOMOPHI_00076 2.6e-180 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
JPOMOPHI_00077 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
JPOMOPHI_00078 5.7e-305 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
JPOMOPHI_00079 1.9e-81 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JPOMOPHI_00080 3.5e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
JPOMOPHI_00081 1.2e-239 hom 1.1.1.3 E Homoserine dehydrogenase
JPOMOPHI_00082 5.4e-189 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
JPOMOPHI_00083 5.2e-278 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
JPOMOPHI_00084 1.2e-64
JPOMOPHI_00085 1e-57
JPOMOPHI_00086 3.5e-163 V ATPases associated with a variety of cellular activities
JPOMOPHI_00087 1.3e-252 V Efflux ABC transporter, permease protein
JPOMOPHI_00088 2.2e-168 mdcF S Transporter, auxin efflux carrier (AEC) family protein
JPOMOPHI_00089 8.4e-240 dapE 3.5.1.18 E Peptidase dimerisation domain
JPOMOPHI_00090 0.0 rne 3.1.26.12 J Ribonuclease E/G family
JPOMOPHI_00091 3.2e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
JPOMOPHI_00092 3.1e-40 rpmA J Ribosomal L27 protein
JPOMOPHI_00093 3.7e-215 K Psort location Cytoplasmic, score
JPOMOPHI_00094 1.1e-298 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JPOMOPHI_00095 4.1e-201 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JPOMOPHI_00096 2e-230 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
JPOMOPHI_00098 5.2e-31 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
JPOMOPHI_00099 1.8e-116 nusG K Participates in transcription elongation, termination and antitermination
JPOMOPHI_00100 2.8e-173 plsC2 2.3.1.51 I Phosphate acyltransferases
JPOMOPHI_00101 2.5e-178 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
JPOMOPHI_00102 3.4e-219 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JPOMOPHI_00103 7.5e-202 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
JPOMOPHI_00104 0.0 3.2.1.97 GH101 G Glycosyl hydrolase 101 beta sandwich domain
JPOMOPHI_00105 6.9e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JPOMOPHI_00106 0.0 ftsK 2.7.11.1, 2.7.7.7, 3.4.21.110, 4.2.1.2 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
JPOMOPHI_00107 2e-113
JPOMOPHI_00109 1.8e-168 T Pfam Adenylate and Guanylate cyclase catalytic domain
JPOMOPHI_00110 6.1e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
JPOMOPHI_00111 4.1e-79 ssb1 L Single-stranded DNA-binding protein
JPOMOPHI_00112 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JPOMOPHI_00113 6.6e-70 rplI J Binds to the 23S rRNA
JPOMOPHI_00114 2e-35 S Parallel beta-helix repeats
JPOMOPHI_00115 1.2e-65 E Domain of unknown function (DUF5011)
JPOMOPHI_00117 3.7e-131 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
JPOMOPHI_00118 3.9e-129 M Protein of unknown function (DUF3152)
JPOMOPHI_00119 5.4e-186 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
JPOMOPHI_00120 2.9e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JPOMOPHI_00121 3.6e-53 acyP 3.6.1.7 C Acylphosphatase
JPOMOPHI_00122 1.2e-60 inlJ M domain protein
JPOMOPHI_00123 0.0 inlJ M domain protein
JPOMOPHI_00124 2.3e-282 M LPXTG cell wall anchor motif
JPOMOPHI_00125 1.8e-215 3.4.22.70 M Sortase family
JPOMOPHI_00126 6.5e-107 S Domain of unknown function (DUF4854)
JPOMOPHI_00127 2.4e-155 fahA Q Fumarylacetoacetate (FAA) hydrolase family
JPOMOPHI_00128 3.7e-29 2.1.1.72 S Protein conserved in bacteria
JPOMOPHI_00129 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
JPOMOPHI_00130 1.6e-132 M Mechanosensitive ion channel
JPOMOPHI_00131 3.8e-119 K Bacterial regulatory proteins, tetR family
JPOMOPHI_00132 4.2e-239 MA20_36090 S Psort location Cytoplasmic, score 8.87
JPOMOPHI_00133 1.2e-232 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
JPOMOPHI_00134 4.5e-68 M Belongs to the glycosyl hydrolase 28 family
JPOMOPHI_00136 3e-41 K Transcriptional regulator
JPOMOPHI_00137 0.0 fadD 6.2.1.3 I AMP-binding enzyme
JPOMOPHI_00138 3.5e-07 S Scramblase
JPOMOPHI_00139 1.2e-35
JPOMOPHI_00144 4e-22 tam 2.1.1.144, 2.1.1.197 S Methyltransferase domain
JPOMOPHI_00145 1.3e-12 tam 2.1.1.144, 2.1.1.197 S Methyltransferase domain
JPOMOPHI_00146 3.3e-236 K Helix-turn-helix XRE-family like proteins
JPOMOPHI_00147 3.7e-54 relB L RelB antitoxin
JPOMOPHI_00148 9.8e-17 T Toxic component of a toxin-antitoxin (TA) module
JPOMOPHI_00149 1.4e-130 K helix_turn_helix, mercury resistance
JPOMOPHI_00150 4.3e-242 yxiO S Vacuole effluxer Atg22 like
JPOMOPHI_00152 6.5e-201 yegV G pfkB family carbohydrate kinase
JPOMOPHI_00153 1.4e-29 rpmB J Ribosomal L28 family
JPOMOPHI_00154 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
JPOMOPHI_00155 1.2e-220 steT E amino acid
JPOMOPHI_00158 0.0
JPOMOPHI_00159 7.6e-249 U Sodium:dicarboxylate symporter family
JPOMOPHI_00160 5.8e-121 rsmD 2.1.1.171 L Conserved hypothetical protein 95
JPOMOPHI_00161 2.9e-105 XK27_02070 S Nitroreductase family
JPOMOPHI_00162 8.9e-83 hsp20 O Hsp20/alpha crystallin family
JPOMOPHI_00163 4.3e-162 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
JPOMOPHI_00164 6.4e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JPOMOPHI_00165 1.8e-34 CP_0960 S Belongs to the UPF0109 family
JPOMOPHI_00166 1e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
JPOMOPHI_00167 1.1e-294 ydfD EK Alanine-glyoxylate amino-transferase
JPOMOPHI_00168 5.9e-94 argO S LysE type translocator
JPOMOPHI_00169 1.9e-222 S Endonuclease/Exonuclease/phosphatase family
JPOMOPHI_00170 8.4e-272 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JPOMOPHI_00171 1.4e-164 P Cation efflux family
JPOMOPHI_00172 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
JPOMOPHI_00173 2.3e-136 guaA1 6.3.5.2 F Peptidase C26
JPOMOPHI_00174 0.0 yjjK S ABC transporter
JPOMOPHI_00175 2e-58 S Protein of unknown function (DUF3039)
JPOMOPHI_00176 1.4e-89 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JPOMOPHI_00177 3.6e-107
JPOMOPHI_00178 2.3e-113 yceD S Uncharacterized ACR, COG1399
JPOMOPHI_00179 2.3e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
JPOMOPHI_00180 6.1e-140 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JPOMOPHI_00181 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
JPOMOPHI_00182 7.6e-92 ilvN 2.2.1.6 E ACT domain
JPOMOPHI_00184 4.4e-247 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JPOMOPHI_00185 2.1e-134 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JPOMOPHI_00186 1.7e-117 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JPOMOPHI_00187 2.4e-176 S Auxin Efflux Carrier
JPOMOPHI_00190 0.0 pgi 5.3.1.9 G Belongs to the GPI family
JPOMOPHI_00191 1.5e-190
JPOMOPHI_00193 6.9e-201
JPOMOPHI_00195 3e-120 mgtC S MgtC family
JPOMOPHI_00196 0.0 mgtA 3.6.3.2 P Cation transporting ATPase, C-terminus
JPOMOPHI_00197 7.6e-102 mgtA 3.6.3.2 P Cation transporting ATPase, C-terminus
JPOMOPHI_00198 1.8e-273 abcT3 P ATPases associated with a variety of cellular activities
JPOMOPHI_00199 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
JPOMOPHI_00201 6.8e-173 K Putative sugar-binding domain
JPOMOPHI_00202 8.8e-213 gatC G PTS system sugar-specific permease component
JPOMOPHI_00203 8.8e-292 2.7.1.53 G FGGY family of carbohydrate kinases, C-terminal domain
JPOMOPHI_00204 1.1e-172 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
JPOMOPHI_00205 2.2e-128 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
JPOMOPHI_00206 5.6e-62 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JPOMOPHI_00207 3.2e-155 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JPOMOPHI_00208 2.5e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JPOMOPHI_00209 5.1e-201 K helix_turn _helix lactose operon repressor
JPOMOPHI_00210 7.1e-08 tnp7109-21 L Integrase core domain
JPOMOPHI_00211 0.0 fadD 6.2.1.3 I AMP-binding enzyme
JPOMOPHI_00212 6.9e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
JPOMOPHI_00213 9e-110 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JPOMOPHI_00216 2.9e-287 G Glycosyl hydrolases family 43
JPOMOPHI_00217 2.9e-202 K helix_turn _helix lactose operon repressor
JPOMOPHI_00219 5e-170 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
JPOMOPHI_00220 2.9e-122 L Protein of unknown function (DUF1524)
JPOMOPHI_00221 2.5e-226 mntH P H( )-stimulated, divalent metal cation uptake system
JPOMOPHI_00222 6.4e-304 EGP Major facilitator Superfamily
JPOMOPHI_00223 2e-217
JPOMOPHI_00224 1.3e-179 S G5
JPOMOPHI_00225 1.5e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
JPOMOPHI_00226 2.8e-119 F Domain of unknown function (DUF4916)
JPOMOPHI_00227 6.9e-161 mhpC I Alpha/beta hydrolase family
JPOMOPHI_00228 2.4e-08 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
JPOMOPHI_00229 0.0 enhA_2 S L,D-transpeptidase catalytic domain
JPOMOPHI_00230 3.7e-72 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
JPOMOPHI_00231 4.1e-240 S Uncharacterized conserved protein (DUF2183)
JPOMOPHI_00232 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
JPOMOPHI_00233 9.2e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
JPOMOPHI_00234 9.9e-120 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
JPOMOPHI_00235 1.6e-134 glxR K helix_turn_helix, cAMP Regulatory protein
JPOMOPHI_00236 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
JPOMOPHI_00237 1.9e-219 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
JPOMOPHI_00238 2.5e-226 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
JPOMOPHI_00239 3.1e-139 glpR K DeoR C terminal sensor domain
JPOMOPHI_00240 3.3e-252 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
JPOMOPHI_00241 6.4e-232 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
JPOMOPHI_00242 2.8e-241 EGP Sugar (and other) transporter
JPOMOPHI_00243 4.2e-43 gcvR T Belongs to the UPF0237 family
JPOMOPHI_00244 9.4e-253 S UPF0210 protein
JPOMOPHI_00245 2.9e-10 S UPF0210 protein
JPOMOPHI_00246 9.9e-109
JPOMOPHI_00247 1.1e-06 S Membrane
JPOMOPHI_00249 6.3e-122 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JPOMOPHI_00250 8.7e-68 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G Putative cell wall binding repeat
JPOMOPHI_00251 3.8e-36 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G xyloglucan:xyloglucosyl transferase activity
JPOMOPHI_00252 3.9e-184 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
JPOMOPHI_00253 2e-99
JPOMOPHI_00254 2.4e-83 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JPOMOPHI_00255 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JPOMOPHI_00256 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JPOMOPHI_00257 5.5e-95 T Forkhead associated domain
JPOMOPHI_00258 9.2e-67 B Belongs to the OprB family
JPOMOPHI_00259 7.5e-166 3.1.3.16 T Sigma factor PP2C-like phosphatases
JPOMOPHI_00260 0.0 E Transglutaminase-like superfamily
JPOMOPHI_00261 3.9e-227 S Protein of unknown function DUF58
JPOMOPHI_00262 4.8e-222 S ATPase family associated with various cellular activities (AAA)
JPOMOPHI_00263 0.0 S Fibronectin type 3 domain
JPOMOPHI_00264 2.7e-266 KLT Protein tyrosine kinase
JPOMOPHI_00265 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
JPOMOPHI_00266 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
JPOMOPHI_00267 2.6e-147 K -acetyltransferase
JPOMOPHI_00268 3.8e-249 G Major Facilitator Superfamily
JPOMOPHI_00269 8.9e-26 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
JPOMOPHI_00270 6.4e-24 relB L RelB antitoxin
JPOMOPHI_00271 5.5e-35 L Transposase
JPOMOPHI_00272 1e-132 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
JPOMOPHI_00273 8.5e-162 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JPOMOPHI_00274 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JPOMOPHI_00275 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
JPOMOPHI_00276 4.3e-292 O Subtilase family
JPOMOPHI_00277 1.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JPOMOPHI_00278 1.2e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JPOMOPHI_00279 2.3e-270 S zinc finger
JPOMOPHI_00280 4.5e-112 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
JPOMOPHI_00281 2.9e-229 aspB E Aminotransferase class-V
JPOMOPHI_00282 1.8e-157 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
JPOMOPHI_00283 5e-131 tmp1 S Domain of unknown function (DUF4391)
JPOMOPHI_00284 1.7e-148 moeB 2.7.7.80 H ThiF family
JPOMOPHI_00285 3.2e-242 cdr OP Sulfurtransferase TusA
JPOMOPHI_00286 2.4e-181 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
JPOMOPHI_00289 4.3e-203 S Endonuclease/Exonuclease/phosphatase family
JPOMOPHI_00290 7.8e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JPOMOPHI_00291 8.5e-273 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JPOMOPHI_00292 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
JPOMOPHI_00293 2.5e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JPOMOPHI_00296 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
JPOMOPHI_00297 1.5e-161
JPOMOPHI_00298 1e-256 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
JPOMOPHI_00299 0.0 plyA3 3.2.1.18 GH33 M Parallel beta-helix repeats
JPOMOPHI_00300 2.4e-90 K MarR family
JPOMOPHI_00301 0.0 V ABC transporter, ATP-binding protein
JPOMOPHI_00302 0.0 V ABC transporter transmembrane region
JPOMOPHI_00303 2.6e-167 S Patatin-like phospholipase
JPOMOPHI_00304 1.9e-152 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
JPOMOPHI_00305 2.8e-168 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
JPOMOPHI_00306 7.6e-115 S Vitamin K epoxide reductase
JPOMOPHI_00307 4.8e-165 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
JPOMOPHI_00308 6.1e-32 S Protein of unknown function (DUF3107)
JPOMOPHI_00309 7.8e-245 mphA S Aminoglycoside phosphotransferase
JPOMOPHI_00310 4.5e-280 uvrD2 3.6.4.12 L DNA helicase
JPOMOPHI_00311 1.2e-288 S Zincin-like metallopeptidase
JPOMOPHI_00312 7.6e-152 lon T Belongs to the peptidase S16 family
JPOMOPHI_00313 5.7e-47 S Protein of unknown function (DUF3052)
JPOMOPHI_00314 8.1e-196 K helix_turn _helix lactose operon repressor
JPOMOPHI_00315 3.6e-61 S Thiamine-binding protein
JPOMOPHI_00316 5.4e-164 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
JPOMOPHI_00317 2.6e-230 O AAA domain (Cdc48 subfamily)
JPOMOPHI_00318 1.3e-84
JPOMOPHI_00319 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JPOMOPHI_00320 6.8e-159 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JPOMOPHI_00321 0.0 lacZ 3.2.1.23 G Domain of unknown function (DUF4982)
JPOMOPHI_00322 1.8e-300 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
JPOMOPHI_00323 9.5e-247 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JPOMOPHI_00324 3.1e-229 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JPOMOPHI_00325 2.8e-79 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
JPOMOPHI_00326 4.8e-42 yggT S YGGT family
JPOMOPHI_00327 9.7e-90 3.1.21.3 V DivIVA protein
JPOMOPHI_00328 4e-103 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JPOMOPHI_00329 2.6e-177 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
JPOMOPHI_00331 6e-63
JPOMOPHI_00332 2.2e-137 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
JPOMOPHI_00333 3.7e-202 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JPOMOPHI_00334 5.9e-189 ftsE D Cell division ATP-binding protein FtsE
JPOMOPHI_00335 2.4e-159 ftsX D Part of the ABC transporter FtsEX involved in cellular division
JPOMOPHI_00336 6.5e-159 usp 3.5.1.28 CBM50 D CHAP domain protein
JPOMOPHI_00337 3e-76 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
JPOMOPHI_00338 8.7e-147 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
JPOMOPHI_00339 5.3e-46
JPOMOPHI_00340 5.3e-22
JPOMOPHI_00342 2.4e-183 2.7.11.1 NU Tfp pilus assembly protein FimV
JPOMOPHI_00343 3.7e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
JPOMOPHI_00344 1e-235 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JPOMOPHI_00345 2.7e-291 I acetylesterase activity
JPOMOPHI_00346 5.1e-142 recO L Involved in DNA repair and RecF pathway recombination
JPOMOPHI_00347 1.8e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JPOMOPHI_00348 1.6e-190 ywqG S Domain of unknown function (DUF1963)
JPOMOPHI_00349 1.7e-18 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
JPOMOPHI_00350 5e-36 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
JPOMOPHI_00351 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
JPOMOPHI_00352 1.6e-84 S zinc-ribbon domain
JPOMOPHI_00353 1.6e-46 yhbY J CRS1_YhbY
JPOMOPHI_00354 0.0 4.2.1.53 S MCRA family
JPOMOPHI_00357 1.2e-202 K WYL domain
JPOMOPHI_00358 1.3e-156 yvgN 1.1.1.346 S Aldo/keto reductase family
JPOMOPHI_00359 5.8e-174 dkgA 1.1.1.346 C Aldo/keto reductase family
JPOMOPHI_00360 3.4e-76 yneG S Domain of unknown function (DUF4186)
JPOMOPHI_00362 4.6e-08 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
JPOMOPHI_00363 8.9e-181 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
JPOMOPHI_00364 1.1e-256 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JPOMOPHI_00365 2.3e-223 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JPOMOPHI_00366 3.2e-112 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
JPOMOPHI_00367 7.2e-111
JPOMOPHI_00368 4.8e-122 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JPOMOPHI_00369 1.7e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
JPOMOPHI_00370 1.4e-283 S Uncharacterized protein conserved in bacteria (DUF2252)
JPOMOPHI_00371 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
JPOMOPHI_00372 1.8e-248 S Domain of unknown function (DUF5067)
JPOMOPHI_00373 1.2e-56 EGP Major facilitator Superfamily
JPOMOPHI_00374 1.8e-171 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
JPOMOPHI_00375 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
JPOMOPHI_00376 5.4e-121 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
JPOMOPHI_00377 3.6e-171
JPOMOPHI_00378 2.1e-272 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JPOMOPHI_00379 4.6e-177 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
JPOMOPHI_00380 5.1e-165 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JPOMOPHI_00381 7.5e-129 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JPOMOPHI_00382 1.1e-49 M Lysin motif
JPOMOPHI_00383 8.8e-83 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JPOMOPHI_00384 6.4e-229 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
JPOMOPHI_00385 0.0 L DNA helicase
JPOMOPHI_00386 1.3e-90 mraZ K Belongs to the MraZ family
JPOMOPHI_00387 1.5e-187 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JPOMOPHI_00388 4.1e-62 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
JPOMOPHI_00389 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
JPOMOPHI_00390 2.8e-180 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JPOMOPHI_00391 3.4e-283 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JPOMOPHI_00392 3.6e-202 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JPOMOPHI_00393 2.7e-266 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JPOMOPHI_00394 1.5e-223 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
JPOMOPHI_00395 6.5e-218 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JPOMOPHI_00396 5.8e-294 murC 6.3.2.8 M Belongs to the MurCDEF family
JPOMOPHI_00397 1.8e-157 ftsQ 6.3.2.4 D Cell division protein FtsQ
JPOMOPHI_00398 1.3e-37
JPOMOPHI_00400 1e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JPOMOPHI_00401 4.4e-236 G Major Facilitator Superfamily
JPOMOPHI_00402 1.9e-169 2.7.1.4 G pfkB family carbohydrate kinase
JPOMOPHI_00403 2.4e-223 GK ROK family
JPOMOPHI_00404 9.9e-132 cutC P Participates in the control of copper homeostasis
JPOMOPHI_00405 1.7e-215 GK ROK family
JPOMOPHI_00406 4.3e-152 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JPOMOPHI_00407 2.4e-242 nagA 3.5.1.25 G Amidohydrolase family
JPOMOPHI_00408 1.3e-304 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
JPOMOPHI_00409 6.7e-185 dppB EP Binding-protein-dependent transport system inner membrane component
JPOMOPHI_00410 8.7e-191 dppC EP Binding-protein-dependent transport system inner membrane component
JPOMOPHI_00411 0.0 P Belongs to the ABC transporter superfamily
JPOMOPHI_00412 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
JPOMOPHI_00413 4.3e-97 3.6.1.55 F NUDIX domain
JPOMOPHI_00415 3.1e-287 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
JPOMOPHI_00416 0.0 smc D Required for chromosome condensation and partitioning
JPOMOPHI_00417 7.4e-129 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
JPOMOPHI_00418 9.5e-244 yxbA 6.3.1.12 S ATP-grasp
JPOMOPHI_00419 5.8e-230 2.6.1.33 M DegT/DnrJ/EryC1/StrS aminotransferase family
JPOMOPHI_00420 5.7e-191 V Acetyltransferase (GNAT) domain
JPOMOPHI_00421 2.4e-295 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JPOMOPHI_00422 2.1e-114 sigH K Belongs to the sigma-70 factor family. ECF subfamily
JPOMOPHI_00423 2e-64
JPOMOPHI_00424 9.1e-194 galM 5.1.3.3 G Aldose 1-epimerase
JPOMOPHI_00425 1.6e-180 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JPOMOPHI_00426 7.1e-92 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JPOMOPHI_00427 1.4e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JPOMOPHI_00428 2.3e-133 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
JPOMOPHI_00429 1.4e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JPOMOPHI_00430 2.1e-25 rpmI J Ribosomal protein L35
JPOMOPHI_00431 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JPOMOPHI_00432 5.4e-178 xerD D recombinase XerD
JPOMOPHI_00433 1.8e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
JPOMOPHI_00434 1.4e-150 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JPOMOPHI_00435 6.4e-114 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JPOMOPHI_00436 8.6e-150 nrtR 3.6.1.55 F NUDIX hydrolase
JPOMOPHI_00437 3.7e-251 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JPOMOPHI_00438 6.9e-311 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
JPOMOPHI_00439 1.4e-164 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
JPOMOPHI_00440 3.4e-236 iscS1 2.8.1.7 E Aminotransferase class-V
JPOMOPHI_00441 0.0 typA T Elongation factor G C-terminus
JPOMOPHI_00442 6.4e-80
JPOMOPHI_00443 3.8e-198 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
JPOMOPHI_00444 7.1e-192 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
JPOMOPHI_00445 7.3e-42
JPOMOPHI_00446 8.6e-187 xerC D Belongs to the 'phage' integrase family. XerC subfamily
JPOMOPHI_00447 7.9e-177 appB EP Binding-protein-dependent transport system inner membrane component
JPOMOPHI_00448 1.3e-165 dppC EP N-terminal TM domain of oligopeptide transport permease C
JPOMOPHI_00449 0.0 oppD P Belongs to the ABC transporter superfamily
JPOMOPHI_00450 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
JPOMOPHI_00451 5.2e-262 pepC 3.4.22.40 E Peptidase C1-like family
JPOMOPHI_00452 3.7e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
JPOMOPHI_00453 3.2e-139 S Protein of unknown function (DUF3710)
JPOMOPHI_00454 6.1e-124 S Protein of unknown function (DUF3159)
JPOMOPHI_00455 2.1e-246 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JPOMOPHI_00456 8.3e-108
JPOMOPHI_00457 0.0 ctpE P E1-E2 ATPase
JPOMOPHI_00458 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JPOMOPHI_00460 1.1e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
JPOMOPHI_00461 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
JPOMOPHI_00462 1.1e-53 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
JPOMOPHI_00463 8.5e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JPOMOPHI_00464 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JPOMOPHI_00465 3.2e-135 3.8.1.2 S Haloacid dehalogenase-like hydrolase
JPOMOPHI_00466 4.3e-183 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JPOMOPHI_00467 1.1e-136 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
JPOMOPHI_00468 0.0 arc O AAA ATPase forming ring-shaped complexes
JPOMOPHI_00469 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
JPOMOPHI_00470 1.2e-157 hisN 3.1.3.25 G Inositol monophosphatase family
JPOMOPHI_00471 9.2e-11 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
JPOMOPHI_00472 1e-276 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
JPOMOPHI_00473 8.1e-42 hup L Belongs to the bacterial histone-like protein family
JPOMOPHI_00474 0.0 S Lysylphosphatidylglycerol synthase TM region
JPOMOPHI_00475 3.3e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
JPOMOPHI_00476 7.5e-291 S PGAP1-like protein
JPOMOPHI_00478 2.1e-74
JPOMOPHI_00479 1.6e-148 S von Willebrand factor (vWF) type A domain
JPOMOPHI_00480 7.6e-189 S von Willebrand factor (vWF) type A domain
JPOMOPHI_00481 1.4e-93
JPOMOPHI_00482 1.5e-175 S Protein of unknown function DUF58
JPOMOPHI_00483 5e-196 moxR S ATPase family associated with various cellular activities (AAA)
JPOMOPHI_00484 6.8e-144 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JPOMOPHI_00485 7.6e-71 S LytR cell envelope-related transcriptional attenuator
JPOMOPHI_00486 2.2e-44 cspA K 'Cold-shock' DNA-binding domain
JPOMOPHI_00487 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JPOMOPHI_00488 1.5e-22 S Proteins of 100 residues with WXG
JPOMOPHI_00489 7.6e-163
JPOMOPHI_00490 2.8e-134 KT Response regulator receiver domain protein
JPOMOPHI_00491 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
JPOMOPHI_00492 1e-66 cspB K 'Cold-shock' DNA-binding domain
JPOMOPHI_00493 2.1e-191 S Protein of unknown function (DUF3027)
JPOMOPHI_00494 1.4e-184 uspA T Belongs to the universal stress protein A family
JPOMOPHI_00495 0.0 clpC O ATPase family associated with various cellular activities (AAA)
JPOMOPHI_00499 5.1e-217 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
JPOMOPHI_00500 7.1e-264 hisS 6.1.1.21 J Histidyl-tRNA synthetase
JPOMOPHI_00501 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JPOMOPHI_00502 1.2e-74 K helix_turn_helix, Lux Regulon
JPOMOPHI_00503 6.9e-86 S Aminoacyl-tRNA editing domain
JPOMOPHI_00504 3.9e-139 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
JPOMOPHI_00505 3.1e-145 gluB ET Belongs to the bacterial solute-binding protein 3 family
JPOMOPHI_00506 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
JPOMOPHI_00507 8.2e-199 gluD E Binding-protein-dependent transport system inner membrane component
JPOMOPHI_00508 7.8e-194 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
JPOMOPHI_00509 0.0 L DEAD DEAH box helicase
JPOMOPHI_00510 4.5e-258 rarA L Recombination factor protein RarA
JPOMOPHI_00512 8.9e-257 EGP Major facilitator Superfamily
JPOMOPHI_00513 0.0 ecfA GP ABC transporter, ATP-binding protein
JPOMOPHI_00514 1.1e-104 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JPOMOPHI_00516 1.3e-139 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
JPOMOPHI_00517 2e-213 E Aminotransferase class I and II
JPOMOPHI_00518 3.4e-138 bioM P ATPases associated with a variety of cellular activities
JPOMOPHI_00519 1.9e-68 2.8.2.22 S Arylsulfotransferase Ig-like domain
JPOMOPHI_00520 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
JPOMOPHI_00521 0.0 S Tetratricopeptide repeat
JPOMOPHI_00522 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JPOMOPHI_00523 4.5e-208 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
JPOMOPHI_00524 8.8e-161 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
JPOMOPHI_00525 2e-86 int L Phage integrase, N-terminal SAM-like domain
JPOMOPHI_00526 4.8e-115 L DNA restriction-modification system
JPOMOPHI_00527 7.8e-33 3.1.21.4 L Recognizes the double-stranded sequence CTCGAG and cleaves after C-1
JPOMOPHI_00528 5.2e-79 S GIY-YIG catalytic domain
JPOMOPHI_00532 5.5e-33 traSA D DNA segregation ATPase FtsK SpoIIIE
JPOMOPHI_00534 4.7e-10
JPOMOPHI_00535 1.8e-286 glnA 6.3.1.2 E glutamine synthetase
JPOMOPHI_00536 7.9e-143 S Domain of unknown function (DUF4191)
JPOMOPHI_00537 3.1e-281 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JPOMOPHI_00538 5.5e-104 S Protein of unknown function (DUF3043)
JPOMOPHI_00539 1.4e-259 argE E Peptidase dimerisation domain
JPOMOPHI_00540 8.3e-191 V N-Acetylmuramoyl-L-alanine amidase
JPOMOPHI_00541 2.6e-149 ytrE V ATPases associated with a variety of cellular activities
JPOMOPHI_00542 3.8e-196
JPOMOPHI_00543 2.3e-232 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
JPOMOPHI_00544 0.0 S Uncharacterised protein family (UPF0182)
JPOMOPHI_00545 4.8e-207 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
JPOMOPHI_00546 0.0 2.7.8.14, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
JPOMOPHI_00547 7e-220 I transferase activity, transferring acyl groups other than amino-acyl groups
JPOMOPHI_00550 9e-130 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
JPOMOPHI_00551 2.1e-196 GM GDP-mannose 4,6 dehydratase
JPOMOPHI_00552 3.6e-151 GM ABC-2 type transporter
JPOMOPHI_00553 4.9e-145 tagH 3.6.3.38, 3.6.3.40 GM ABC transporter
JPOMOPHI_00554 2.7e-97 2.3.1.183 M Acetyltransferase (GNAT) domain
JPOMOPHI_00555 7.6e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JPOMOPHI_00556 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JPOMOPHI_00557 1e-295 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH chorismate binding enzyme
JPOMOPHI_00558 6.4e-153 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 E branched-chain-amino-acid transaminase activity
JPOMOPHI_00559 6.9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JPOMOPHI_00560 6.1e-100 divIC D Septum formation initiator
JPOMOPHI_00561 2e-106 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
JPOMOPHI_00562 5.8e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
JPOMOPHI_00564 1.8e-96
JPOMOPHI_00565 8.8e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
JPOMOPHI_00566 2.2e-72 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
JPOMOPHI_00567 7.5e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JPOMOPHI_00569 6.8e-107
JPOMOPHI_00570 2e-142 yplQ S Haemolysin-III related
JPOMOPHI_00571 7.3e-286 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
JPOMOPHI_00572 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
JPOMOPHI_00573 0.0 D FtsK/SpoIIIE family
JPOMOPHI_00574 2.4e-270 K Cell envelope-related transcriptional attenuator domain
JPOMOPHI_00575 5.8e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
JPOMOPHI_00576 0.0 S Glycosyl transferase, family 2
JPOMOPHI_00577 8e-261
JPOMOPHI_00578 6.3e-66 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
JPOMOPHI_00579 1.7e-156 cof 5.2.1.8 T Eukaryotic phosphomannomutase
JPOMOPHI_00580 3.7e-131 ctsW S Phosphoribosyl transferase domain
JPOMOPHI_00581 1.4e-71 rulA 3.4.21.88 KT Peptidase S24-like
JPOMOPHI_00582 1.9e-203 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
JPOMOPHI_00583 1.9e-127 T Response regulator receiver domain protein
JPOMOPHI_00584 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JPOMOPHI_00585 5.1e-102 carD K CarD-like/TRCF domain
JPOMOPHI_00586 8.5e-84 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
JPOMOPHI_00587 4.3e-139 znuB U ABC 3 transport family
JPOMOPHI_00588 2.8e-165 znuC P ATPases associated with a variety of cellular activities
JPOMOPHI_00589 2.5e-173 P Zinc-uptake complex component A periplasmic
JPOMOPHI_00590 1.8e-164 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JPOMOPHI_00591 3.3e-243 rpsA J Ribosomal protein S1
JPOMOPHI_00592 2.7e-106 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JPOMOPHI_00593 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JPOMOPHI_00594 1.7e-179 terC P Integral membrane protein, TerC family
JPOMOPHI_00595 6.6e-273 pyk 2.7.1.40 G Pyruvate kinase
JPOMOPHI_00596 1.8e-110 aspA 3.6.1.13 L NUDIX domain
JPOMOPHI_00598 1.3e-118 pdtaR T Response regulator receiver domain protein
JPOMOPHI_00599 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JPOMOPHI_00600 2.9e-173 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
JPOMOPHI_00601 6.5e-120 3.6.1.13 L NUDIX domain
JPOMOPHI_00602 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
JPOMOPHI_00603 1.7e-217 ykiI
JPOMOPHI_00605 2.7e-134 L Phage integrase family
JPOMOPHI_00606 2.9e-108 3.4.13.21 E Peptidase family S51
JPOMOPHI_00607 1.2e-274 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
JPOMOPHI_00608 9.8e-233 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JPOMOPHI_00609 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
JPOMOPHI_00610 1.2e-120 XK27_07020 S Domain of unknown function (DUF1846)
JPOMOPHI_00611 1.2e-146 XK27_07020 S Domain of unknown function (DUF1846)
JPOMOPHI_00612 1.7e-122
JPOMOPHI_00614 9.9e-112 ysdA S Protein of unknown function (DUF1294)
JPOMOPHI_00615 1.2e-27
JPOMOPHI_00616 4.4e-51
JPOMOPHI_00619 2.3e-303 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
JPOMOPHI_00620 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
JPOMOPHI_00621 3.4e-189 pit P Phosphate transporter family
JPOMOPHI_00622 1.1e-115 MA20_27875 P Protein of unknown function DUF47
JPOMOPHI_00623 4.1e-119 K helix_turn_helix, Lux Regulon
JPOMOPHI_00624 5.4e-234 T Histidine kinase
JPOMOPHI_00625 6.7e-38 pacL 3.6.3.8, 3.6.3.9 P ATPase, P-type transporting, HAD superfamily, subfamily IC
JPOMOPHI_00626 5e-187 V ATPases associated with a variety of cellular activities
JPOMOPHI_00627 3e-181 V ABC-2 family transporter protein
JPOMOPHI_00628 9.4e-203 V ABC-2 family transporter protein
JPOMOPHI_00629 1.7e-284 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
JPOMOPHI_00630 2.8e-204 L Transposase and inactivated derivatives IS30 family
JPOMOPHI_00632 1.3e-78
JPOMOPHI_00633 1.2e-64 D MobA/MobL family
JPOMOPHI_00634 8.6e-48 L Transposase
JPOMOPHI_00635 5.9e-182 tnp7109-21 L Integrase core domain
JPOMOPHI_00636 1.1e-26 2.1.1.72 S Adenine-specific methyltransferase EcoRI
JPOMOPHI_00637 9e-40
JPOMOPHI_00638 3.6e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
JPOMOPHI_00640 3e-105 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JPOMOPHI_00641 8.1e-47 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JPOMOPHI_00643 4.1e-240 pbuX F Permease family
JPOMOPHI_00644 1.9e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JPOMOPHI_00645 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
JPOMOPHI_00646 0.0 pcrA 3.6.4.12 L DNA helicase
JPOMOPHI_00647 8.2e-64 S Domain of unknown function (DUF4418)
JPOMOPHI_00648 7.9e-211 V FtsX-like permease family
JPOMOPHI_00649 1.9e-128 lolD V ABC transporter
JPOMOPHI_00650 1e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JPOMOPHI_00651 0.0 oatA I Psort location CytoplasmicMembrane, score 9.99
JPOMOPHI_00652 6.5e-136 pgm3 G Phosphoglycerate mutase family
JPOMOPHI_00653 3.8e-64 WQ51_05790 S Bacterial protein of unknown function (DUF948)
JPOMOPHI_00654 1.1e-36
JPOMOPHI_00655 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JPOMOPHI_00656 3e-75 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JPOMOPHI_00657 7.1e-188 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JPOMOPHI_00658 1.3e-47 3.4.23.43 S Type IV leader peptidase family
JPOMOPHI_00659 1.6e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JPOMOPHI_00660 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JPOMOPHI_00661 2.2e-78 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
JPOMOPHI_00662 3.4e-15
JPOMOPHI_00663 1.7e-120 K helix_turn_helix, Lux Regulon
JPOMOPHI_00664 2.6e-07 3.4.22.70 M Sortase family
JPOMOPHI_00665 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JPOMOPHI_00666 4.8e-290 sufB O FeS assembly protein SufB
JPOMOPHI_00667 5.7e-233 sufD O FeS assembly protein SufD
JPOMOPHI_00668 1.4e-144 sufC O FeS assembly ATPase SufC
JPOMOPHI_00669 1.6e-241 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JPOMOPHI_00670 1.5e-100 iscU C SUF system FeS assembly protein, NifU family
JPOMOPHI_00671 1.2e-108 yitW S Iron-sulfur cluster assembly protein
JPOMOPHI_00672 4.7e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JPOMOPHI_00673 4e-164 spoU 2.1.1.185 J SpoU rRNA Methylase family
JPOMOPHI_00675 6.1e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
JPOMOPHI_00676 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
JPOMOPHI_00677 3.4e-197 phoH T PhoH-like protein
JPOMOPHI_00678 7.4e-100 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JPOMOPHI_00679 2.7e-250 corC S CBS domain
JPOMOPHI_00680 1.5e-186 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JPOMOPHI_00681 0.0 fadD 6.2.1.3 I AMP-binding enzyme
JPOMOPHI_00682 1.1e-201 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
JPOMOPHI_00683 4.4e-44 pntA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
JPOMOPHI_00684 2.3e-233 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
JPOMOPHI_00685 4.8e-190 S alpha beta
JPOMOPHI_00686 4e-94 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
JPOMOPHI_00687 2.4e-225 ilvE 2.6.1.42 E Amino-transferase class IV
JPOMOPHI_00688 4e-46 S phosphoesterase or phosphohydrolase
JPOMOPHI_00689 5.1e-127 3.1.4.37 T RNA ligase
JPOMOPHI_00690 4.4e-135 S UPF0126 domain
JPOMOPHI_00691 9.9e-34 rpsT J Binds directly to 16S ribosomal RNA
JPOMOPHI_00692 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JPOMOPHI_00693 9.7e-245 hemN H Involved in the biosynthesis of porphyrin-containing compound
JPOMOPHI_00694 2e-12 S Membrane
JPOMOPHI_00695 1.5e-238 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
JPOMOPHI_00696 0.0 tetP J Elongation factor G, domain IV
JPOMOPHI_00697 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
JPOMOPHI_00698 7.7e-304 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
JPOMOPHI_00699 3.6e-82
JPOMOPHI_00700 1.1e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
JPOMOPHI_00701 1.4e-181 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
JPOMOPHI_00702 9.3e-156 ybeM S Carbon-nitrogen hydrolase
JPOMOPHI_00703 3e-50 S Sel1-like repeats.
JPOMOPHI_00704 2e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
JPOMOPHI_00705 3.7e-61 S Short C-terminal domain
JPOMOPHI_00706 4.6e-180 L Transposase
JPOMOPHI_00707 2.3e-31 XK26_04895
JPOMOPHI_00708 5.1e-22 XK26_04895
JPOMOPHI_00709 0.0 KL Type III restriction enzyme res subunit
JPOMOPHI_00710 9.5e-38 L Eco57I restriction-modification methylase
JPOMOPHI_00711 4.7e-137 L IstB-like ATP binding protein
JPOMOPHI_00712 1.3e-245 L Transposase
JPOMOPHI_00713 1.4e-64 rarD 3.4.17.13 E Rard protein
JPOMOPHI_00714 3e-178 I alpha/beta hydrolase fold
JPOMOPHI_00715 3.3e-208 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JPOMOPHI_00716 3.4e-100 sixA T Phosphoglycerate mutase family
JPOMOPHI_00717 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JPOMOPHI_00718 9.6e-163 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
JPOMOPHI_00720 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
JPOMOPHI_00721 8.3e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
JPOMOPHI_00722 2e-73 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
JPOMOPHI_00723 8.5e-281 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JPOMOPHI_00724 2.6e-180 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
JPOMOPHI_00725 3.8e-156 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
JPOMOPHI_00726 1.6e-179 pyrD 1.3.1.14 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JPOMOPHI_00727 6.5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JPOMOPHI_00728 5.8e-194 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
JPOMOPHI_00729 2.8e-141
JPOMOPHI_00730 1.3e-16 K Psort location Cytoplasmic, score
JPOMOPHI_00731 9.1e-16 KLT Protein tyrosine kinase
JPOMOPHI_00732 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JPOMOPHI_00733 4.8e-241 vbsD V MatE
JPOMOPHI_00734 9.6e-132 S Enoyl-(Acyl carrier protein) reductase
JPOMOPHI_00735 9.7e-132 magIII L endonuclease III
JPOMOPHI_00736 1e-93 laaE K Transcriptional regulator PadR-like family
JPOMOPHI_00737 5.8e-175 S Membrane transport protein
JPOMOPHI_00738 1.1e-65 4.1.1.44 S Cupin domain
JPOMOPHI_00739 7.2e-222 hipA 2.7.11.1 S HipA N-terminal domain
JPOMOPHI_00740 6.4e-41 K Helix-turn-helix
JPOMOPHI_00741 1.5e-43 tam 2.1.1.144, 2.1.1.197 FG trans-aconitate 2-methyltransferase activity
JPOMOPHI_00742 1e-17
JPOMOPHI_00743 1.9e-101 K Bacterial regulatory proteins, tetR family
JPOMOPHI_00744 3.3e-86 T Domain of unknown function (DUF4234)
JPOMOPHI_00745 1.2e-171 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
JPOMOPHI_00746 1.5e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
JPOMOPHI_00747 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JPOMOPHI_00748 4e-144 4.1.1.44 S Carboxymuconolactone decarboxylase family
JPOMOPHI_00749 1.3e-90 dkgB S Oxidoreductase, aldo keto reductase family protein
JPOMOPHI_00751 5.1e-289 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
JPOMOPHI_00752 0.0 pafB K WYL domain
JPOMOPHI_00753 1e-51
JPOMOPHI_00754 0.0 helY L DEAD DEAH box helicase
JPOMOPHI_00755 3e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
JPOMOPHI_00756 1.6e-142 pgp 3.1.3.18 S HAD-hyrolase-like
JPOMOPHI_00758 3.6e-90 K Putative zinc ribbon domain
JPOMOPHI_00759 7.2e-126 S GyrI-like small molecule binding domain
JPOMOPHI_00760 3.3e-24 L DNA integration
JPOMOPHI_00762 7.3e-62
JPOMOPHI_00763 3e-119 K helix_turn_helix, mercury resistance
JPOMOPHI_00764 9.6e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
JPOMOPHI_00765 3.4e-141 S Bacterial protein of unknown function (DUF881)
JPOMOPHI_00766 2.6e-31 sbp S Protein of unknown function (DUF1290)
JPOMOPHI_00767 9e-173 S Bacterial protein of unknown function (DUF881)
JPOMOPHI_00768 1e-116 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JPOMOPHI_00769 1.8e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
JPOMOPHI_00770 6.4e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
JPOMOPHI_00771 6.3e-101 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
JPOMOPHI_00772 3.5e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JPOMOPHI_00773 5.4e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
JPOMOPHI_00774 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
JPOMOPHI_00775 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
JPOMOPHI_00776 7.5e-146 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JPOMOPHI_00777 4.1e-103 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
JPOMOPHI_00778 5.7e-30
JPOMOPHI_00779 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
JPOMOPHI_00780 3.4e-242
JPOMOPHI_00781 1.4e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JPOMOPHI_00782 1.8e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
JPOMOPHI_00783 1e-99 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JPOMOPHI_00784 2.2e-38 yajC U Preprotein translocase subunit
JPOMOPHI_00785 1.8e-201 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JPOMOPHI_00786 2.5e-104 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JPOMOPHI_00787 1.8e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
JPOMOPHI_00788 1e-131 yebC K transcriptional regulatory protein
JPOMOPHI_00789 0.0 3.2.1.52 GH20 M Glycosyl hydrolase family 20, catalytic domain
JPOMOPHI_00790 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JPOMOPHI_00791 1.7e-250 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
JPOMOPHI_00795 1.5e-214
JPOMOPHI_00799 2.8e-156 S PAC2 family
JPOMOPHI_00800 5e-168 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
JPOMOPHI_00801 7.1e-160 G Fructosamine kinase
JPOMOPHI_00802 3.4e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JPOMOPHI_00803 2.3e-221 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JPOMOPHI_00804 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
JPOMOPHI_00805 1e-201 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JPOMOPHI_00806 1.2e-143 yoaK S Protein of unknown function (DUF1275)
JPOMOPHI_00807 8.3e-252 brnQ U Component of the transport system for branched-chain amino acids
JPOMOPHI_00809 3.1e-243 mepA_6 V MatE
JPOMOPHI_00810 6.1e-162 S Sucrose-6F-phosphate phosphohydrolase
JPOMOPHI_00811 3.1e-178 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
JPOMOPHI_00812 8e-33 secG U Preprotein translocase SecG subunit
JPOMOPHI_00813 5.3e-147 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JPOMOPHI_00814 2e-222 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
JPOMOPHI_00815 3.1e-173 whiA K May be required for sporulation
JPOMOPHI_00816 4.5e-177 rapZ S Displays ATPase and GTPase activities
JPOMOPHI_00817 4.3e-183 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
JPOMOPHI_00818 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JPOMOPHI_00819 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
JPOMOPHI_00820 6.1e-77
JPOMOPHI_00821 7.1e-28 V MacB-like periplasmic core domain
JPOMOPHI_00822 3.7e-117 K Transcriptional regulatory protein, C terminal
JPOMOPHI_00823 2.3e-233 qseC 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
JPOMOPHI_00824 3.2e-110 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
JPOMOPHI_00825 2.6e-302 ybiT S ABC transporter
JPOMOPHI_00826 8.5e-198 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JPOMOPHI_00827 1.1e-307 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
JPOMOPHI_00828 3.1e-206 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
JPOMOPHI_00829 2.4e-217 GK ROK family
JPOMOPHI_00830 6.9e-178 2.7.1.2 GK ROK family
JPOMOPHI_00831 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
JPOMOPHI_00832 5.5e-167 G ABC transporter permease
JPOMOPHI_00833 1.4e-173 G Binding-protein-dependent transport system inner membrane component
JPOMOPHI_00834 2.2e-243 G Bacterial extracellular solute-binding protein
JPOMOPHI_00835 4.3e-305 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JPOMOPHI_00836 5.3e-74 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JPOMOPHI_00837 1.4e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
JPOMOPHI_00838 8.3e-229 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
JPOMOPHI_00839 1.8e-176 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
JPOMOPHI_00840 2.4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JPOMOPHI_00841 2.4e-133 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
JPOMOPHI_00842 1.8e-127 3.2.1.8 S alpha beta
JPOMOPHI_00843 4.8e-146 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JPOMOPHI_00844 1.4e-145 rpsB J Belongs to the universal ribosomal protein uS2 family
JPOMOPHI_00845 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JPOMOPHI_00846 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
JPOMOPHI_00847 3.4e-91
JPOMOPHI_00848 2.5e-200 guaB 1.1.1.205 F IMP dehydrogenase family protein
JPOMOPHI_00849 1.3e-240 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
JPOMOPHI_00850 5.1e-274 G ABC transporter substrate-binding protein
JPOMOPHI_00851 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
JPOMOPHI_00852 6.4e-130 M Peptidase family M23
JPOMOPHI_00854 6.2e-196 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JPOMOPHI_00855 5.3e-104 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
JPOMOPHI_00856 5.6e-158 yeaZ 2.3.1.234 O Glycoprotease family
JPOMOPHI_00857 1.7e-119 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
JPOMOPHI_00858 5.3e-181 holA 2.7.7.7 L DNA polymerase III delta subunit
JPOMOPHI_00859 0.0 comE S Competence protein
JPOMOPHI_00860 1e-81 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
JPOMOPHI_00861 2.2e-22 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
JPOMOPHI_00862 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
JPOMOPHI_00863 2.9e-168 ET Bacterial periplasmic substrate-binding proteins
JPOMOPHI_00864 4.8e-171 corA P CorA-like Mg2+ transporter protein
JPOMOPHI_00865 4e-161 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
JPOMOPHI_00866 2.6e-299 E Serine carboxypeptidase
JPOMOPHI_00867 0.0 S Psort location Cytoplasmic, score 8.87
JPOMOPHI_00868 3.9e-110 S Domain of unknown function (DUF4194)
JPOMOPHI_00869 1.5e-283 S Psort location Cytoplasmic, score 8.87
JPOMOPHI_00870 9e-161 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JPOMOPHI_00871 8.4e-63 yeaO K Protein of unknown function, DUF488
JPOMOPHI_00872 1.2e-114 ydaF_1 J Acetyltransferase (GNAT) domain
JPOMOPHI_00873 8.3e-90 MA20_25245 K FR47-like protein
JPOMOPHI_00874 7e-56 K Transcriptional regulator
JPOMOPHI_00875 4.5e-36 2.7.7.1, 3.6.1.13, 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
JPOMOPHI_00876 2.5e-183 S Acetyltransferase (GNAT) domain
JPOMOPHI_00877 1.3e-76 qseC 2.7.13.3 T Histidine kinase
JPOMOPHI_00878 5.5e-132 S SOS response associated peptidase (SRAP)
JPOMOPHI_00879 1.9e-23
JPOMOPHI_00880 7.8e-27
JPOMOPHI_00881 6.9e-78 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JPOMOPHI_00882 9.2e-162 rpoC M heme binding
JPOMOPHI_00883 2.5e-27 EGP Major facilitator Superfamily
JPOMOPHI_00884 4.8e-39 EGP Major facilitator Superfamily
JPOMOPHI_00886 1.7e-154
JPOMOPHI_00887 1.5e-66 ypjC S Putative ABC-transporter type IV
JPOMOPHI_00888 2.3e-110 ycaK 1.6.5.2 S NADPH-dependent FMN reductase
JPOMOPHI_00889 1.8e-192 V VanZ like family
JPOMOPHI_00890 4.2e-147 KT RESPONSE REGULATOR receiver
JPOMOPHI_00891 2.7e-70 pdxH S Pfam:Pyridox_oxidase
JPOMOPHI_00892 4.2e-140 yijF S Domain of unknown function (DUF1287)
JPOMOPHI_00893 2.5e-132 C Putative TM nitroreductase
JPOMOPHI_00894 4.1e-114
JPOMOPHI_00896 1.2e-254 nplT 3.2.1.1 GH13 G Alpha amylase, catalytic domain
JPOMOPHI_00897 1.1e-77 S Bacterial PH domain
JPOMOPHI_00898 4.2e-138 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
JPOMOPHI_00899 1.3e-67 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JPOMOPHI_00900 1e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JPOMOPHI_00902 9.1e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JPOMOPHI_00903 1.2e-143 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JPOMOPHI_00904 2.8e-94
JPOMOPHI_00905 3.1e-237 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JPOMOPHI_00906 6.6e-284 thrC 4.2.3.1 E Threonine synthase N terminus
JPOMOPHI_00907 2.3e-117 S ABC-2 family transporter protein
JPOMOPHI_00908 6.9e-125 S ABC-2 family transporter protein
JPOMOPHI_00909 2.5e-175 V ATPases associated with a variety of cellular activities
JPOMOPHI_00910 3.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
JPOMOPHI_00911 8.9e-124 S Haloacid dehalogenase-like hydrolase
JPOMOPHI_00912 4.9e-294 recN L May be involved in recombinational repair of damaged DNA
JPOMOPHI_00913 7.3e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JPOMOPHI_00914 6.6e-236 trkB P Cation transport protein
JPOMOPHI_00915 3.4e-115 trkA P TrkA-N domain
JPOMOPHI_00916 4.4e-102
JPOMOPHI_00917 1.4e-136 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
JPOMOPHI_00919 9.5e-189 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
JPOMOPHI_00920 4.2e-156 L Tetratricopeptide repeat
JPOMOPHI_00921 6.3e-254 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JPOMOPHI_00922 6.6e-142 S Putative ABC-transporter type IV
JPOMOPHI_00923 7.2e-109 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
JPOMOPHI_00924 1.4e-281 argH 4.3.2.1 E argininosuccinate lyase
JPOMOPHI_00925 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
JPOMOPHI_00926 3.5e-283 3.6.4.12 K Putative DNA-binding domain
JPOMOPHI_00927 5.4e-95 3.1.21.3 V Type I restriction modification DNA specificity domain
JPOMOPHI_00928 0.0 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
JPOMOPHI_00929 1.4e-155 S Domain of unknown function (DUF4357)
JPOMOPHI_00930 2.4e-30
JPOMOPHI_00931 1e-178 L Phage integrase family
JPOMOPHI_00932 4.1e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
JPOMOPHI_00933 7.1e-84 argR K Regulates arginine biosynthesis genes
JPOMOPHI_00934 1.9e-183 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JPOMOPHI_00935 4.3e-247 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
JPOMOPHI_00936 3.7e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
JPOMOPHI_00937 1.3e-215 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JPOMOPHI_00938 3.2e-203 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JPOMOPHI_00939 1.3e-87
JPOMOPHI_00940 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
JPOMOPHI_00941 7e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JPOMOPHI_00942 5.4e-161 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JPOMOPHI_00943 2.5e-127 ybbL V ATPases associated with a variety of cellular activities
JPOMOPHI_00944 5.5e-136 ybbM V Uncharacterised protein family (UPF0014)
JPOMOPHI_00945 1.3e-41 IQ oxidoreductase activity
JPOMOPHI_00947 9.2e-90 K AraC-like ligand binding domain
JPOMOPHI_00948 1.4e-237 rutG F Permease family
JPOMOPHI_00949 1.1e-158 3.1.3.73 G Phosphoglycerate mutase family
JPOMOPHI_00950 3.2e-49 estB S Phospholipase/Carboxylesterase
JPOMOPHI_00951 3.1e-187 MA20_14895 S Conserved hypothetical protein 698
JPOMOPHI_00952 6.6e-145 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
JPOMOPHI_00953 1.9e-115 3.1.3.27 E haloacid dehalogenase-like hydrolase
JPOMOPHI_00954 8.4e-290 2.4.1.166 GT2 M Glycosyltransferase like family 2
JPOMOPHI_00956 0.0 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
JPOMOPHI_00957 1.2e-125 ypfH S Phospholipase/Carboxylesterase
JPOMOPHI_00958 1.3e-72 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
JPOMOPHI_00959 3.9e-25
JPOMOPHI_00960 1.2e-34 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
JPOMOPHI_00961 2.4e-65 S Zincin-like metallopeptidase
JPOMOPHI_00962 3.9e-86 S Helix-turn-helix
JPOMOPHI_00963 9.3e-199 S Short C-terminal domain
JPOMOPHI_00964 2e-22
JPOMOPHI_00965 4e-08
JPOMOPHI_00966 1.1e-168
JPOMOPHI_00968 4.5e-79 K Psort location Cytoplasmic, score
JPOMOPHI_00969 5.9e-257 KLT Protein tyrosine kinase
JPOMOPHI_00970 4.5e-60 S Cupin 2, conserved barrel domain protein
JPOMOPHI_00971 2.3e-156 ksgA 2.1.1.182 J Methyltransferase domain
JPOMOPHI_00972 5.6e-59 yccF S Inner membrane component domain
JPOMOPHI_00973 1.9e-119 E Psort location Cytoplasmic, score 8.87
JPOMOPHI_00974 5.2e-248 XK27_00240 K Fic/DOC family
JPOMOPHI_00975 1.4e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JPOMOPHI_00976 4.9e-229 mtnE 2.6.1.83 E Aminotransferase class I and II
JPOMOPHI_00977 2.9e-93 metI P Binding-protein-dependent transport system inner membrane component
JPOMOPHI_00978 1.5e-203 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JPOMOPHI_00979 3.9e-182 1.2.4.1 C Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit
JPOMOPHI_00980 2.9e-187 acoA 1.2.4.1 C Dehydrogenase E1 component
JPOMOPHI_00981 9.3e-147 P NLPA lipoprotein
JPOMOPHI_00982 1.2e-166 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
JPOMOPHI_00983 1.5e-144 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JPOMOPHI_00984 2.2e-265 pip 3.4.11.5 S alpha/beta hydrolase fold
JPOMOPHI_00985 0.0 tcsS2 T Histidine kinase
JPOMOPHI_00986 7.9e-132 K helix_turn_helix, Lux Regulon
JPOMOPHI_00987 0.0 phoN I PAP2 superfamily
JPOMOPHI_00988 0.0 MV MacB-like periplasmic core domain
JPOMOPHI_00989 4e-162 V ABC transporter, ATP-binding protein
JPOMOPHI_00990 4.2e-35 M Domain of unknown function (DUF1906)
JPOMOPHI_00991 5.3e-139
JPOMOPHI_00992 1.6e-94
JPOMOPHI_00993 2.6e-252 metY 2.5.1.49 E Aminotransferase class-V
JPOMOPHI_00994 3.6e-157 S Putative ABC-transporter type IV
JPOMOPHI_00995 1.5e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
JPOMOPHI_00996 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
JPOMOPHI_00997 1.3e-57 ybaZ 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
JPOMOPHI_00998 4.7e-282 dprA 5.99.1.2 LU DNA recombination-mediator protein A
JPOMOPHI_00999 1.9e-294 comM O Magnesium chelatase, subunit ChlI C-terminal
JPOMOPHI_01000 1.1e-70 yraN L Belongs to the UPF0102 family
JPOMOPHI_01001 5.6e-183 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
JPOMOPHI_01002 4.4e-118 safC S O-methyltransferase
JPOMOPHI_01003 8.4e-168 fmt2 3.2.2.10 S Belongs to the LOG family
JPOMOPHI_01004 7e-226 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JPOMOPHI_01005 1e-234 patB 4.4.1.8 E Aminotransferase, class I II
JPOMOPHI_01008 1.7e-243 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JPOMOPHI_01009 9.4e-127 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JPOMOPHI_01010 1.1e-112 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JPOMOPHI_01011 1.1e-253 clcA_2 P Voltage gated chloride channel
JPOMOPHI_01012 5.3e-235 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JPOMOPHI_01013 6e-249 rnd 3.1.13.5 J 3'-5' exonuclease
JPOMOPHI_01014 4.4e-114 S Protein of unknown function (DUF3000)
JPOMOPHI_01015 3.9e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JPOMOPHI_01016 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
JPOMOPHI_01017 6.4e-40
JPOMOPHI_01018 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JPOMOPHI_01019 3.5e-224 S Peptidase dimerisation domain
JPOMOPHI_01020 1.3e-91 P ABC-type metal ion transport system permease component
JPOMOPHI_01021 5.5e-166 S Sucrose-6F-phosphate phosphohydrolase
JPOMOPHI_01022 2.1e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JPOMOPHI_01023 1.1e-49 relB L RelB antitoxin
JPOMOPHI_01024 1.1e-39 T Toxic component of a toxin-antitoxin (TA) module
JPOMOPHI_01025 1.2e-172 E Belongs to the peptidase S1B family
JPOMOPHI_01027 3.1e-34
JPOMOPHI_01028 1.1e-205 S HipA-like C-terminal domain
JPOMOPHI_01029 2e-232 hsdM 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
JPOMOPHI_01030 4.6e-73 S EcsC protein family
JPOMOPHI_01032 1.6e-26 L DNA integration
JPOMOPHI_01033 1.1e-26
JPOMOPHI_01034 7.8e-131 fic D Fic/DOC family
JPOMOPHI_01035 8.1e-233 L Phage integrase family
JPOMOPHI_01036 2.6e-27
JPOMOPHI_01037 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JPOMOPHI_01038 3.8e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
JPOMOPHI_01039 1.4e-47 S Domain of unknown function (DUF4193)
JPOMOPHI_01040 3.2e-184 S Protein of unknown function (DUF3071)
JPOMOPHI_01041 6.5e-237 S Type I phosphodiesterase / nucleotide pyrophosphatase
JPOMOPHI_01042 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
JPOMOPHI_01043 0.0 lhr L DEAD DEAH box helicase
JPOMOPHI_01044 3.9e-25 yozG K Cro/C1-type HTH DNA-binding domain
JPOMOPHI_01045 7.4e-42 S Protein of unknown function (DUF2975)
JPOMOPHI_01046 1.9e-117 aspA 4.3.1.1 E Fumarase C C-terminus
JPOMOPHI_01047 2.6e-109 aspA 4.3.1.1 E Fumarase C C-terminus
JPOMOPHI_01048 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
JPOMOPHI_01049 6.3e-181 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JPOMOPHI_01050 1.7e-122
JPOMOPHI_01051 8.8e-201 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
JPOMOPHI_01052 0.0 pknL 2.7.11.1 KLT PASTA
JPOMOPHI_01053 3.9e-133 plsC2 2.3.1.51 I Phosphate acyltransferases
JPOMOPHI_01054 4.3e-109
JPOMOPHI_01055 7.9e-191 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JPOMOPHI_01056 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JPOMOPHI_01057 2.5e-110 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JPOMOPHI_01059 3.6e-27 marR5 K Winged helix DNA-binding domain
JPOMOPHI_01060 9.3e-74 recX S Modulates RecA activity
JPOMOPHI_01061 2.6e-214 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JPOMOPHI_01062 8.2e-40 S Protein of unknown function (DUF3046)
JPOMOPHI_01063 6.1e-80 K Helix-turn-helix XRE-family like proteins
JPOMOPHI_01064 2.2e-96 cinA 3.5.1.42 S Belongs to the CinA family
JPOMOPHI_01065 4.6e-120 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JPOMOPHI_01066 0.0 ftsK D FtsK SpoIIIE family protein
JPOMOPHI_01067 2.7e-137 fic D Fic/DOC family
JPOMOPHI_01068 3e-185 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JPOMOPHI_01069 2.1e-279 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JPOMOPHI_01070 4.1e-127 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
JPOMOPHI_01071 1.1e-167 ydeD EG EamA-like transporter family
JPOMOPHI_01072 9.5e-131 ybhL S Belongs to the BI1 family
JPOMOPHI_01073 3.1e-86 S Domain of unknown function (DUF5067)
JPOMOPHI_01074 1.1e-262 T Histidine kinase
JPOMOPHI_01075 5.3e-116 K helix_turn_helix, Lux Regulon
JPOMOPHI_01076 1.2e-117 S Protein of unknown function DUF262
JPOMOPHI_01077 3.1e-275 S Protein of unknown function DUF262
JPOMOPHI_01078 5.7e-302 gmk 2.4.2.10, 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
JPOMOPHI_01079 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
JPOMOPHI_01080 7.6e-238 carA 6.3.5.5 F Belongs to the CarA family
JPOMOPHI_01081 8e-88 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JPOMOPHI_01082 3.3e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JPOMOPHI_01084 1.1e-190 EGP Transmembrane secretion effector
JPOMOPHI_01085 0.0 S Esterase-like activity of phytase
JPOMOPHI_01086 8.1e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JPOMOPHI_01087 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JPOMOPHI_01088 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JPOMOPHI_01089 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JPOMOPHI_01091 6.5e-198 ltaE 4.1.2.48 E Beta-eliminating lyase
JPOMOPHI_01092 1.2e-227 M Glycosyl transferase 4-like domain
JPOMOPHI_01093 0.0 M Parallel beta-helix repeats
JPOMOPHI_01094 2.2e-235 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JPOMOPHI_01095 3.8e-139 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
JPOMOPHI_01096 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
JPOMOPHI_01097 7.2e-108
JPOMOPHI_01098 8.5e-51 S Protein of unknown function (DUF4230)
JPOMOPHI_01099 9.6e-152 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
JPOMOPHI_01100 8.9e-33 K DNA-binding transcription factor activity
JPOMOPHI_01101 4.7e-69 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JPOMOPHI_01102 2e-32
JPOMOPHI_01103 5.5e-305 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
JPOMOPHI_01104 1.3e-292 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JPOMOPHI_01105 6.8e-187 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
JPOMOPHI_01106 5e-240 purD 6.3.4.13 F Belongs to the GARS family
JPOMOPHI_01107 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
JPOMOPHI_01108 1.7e-246 S Putative esterase
JPOMOPHI_01109 0.0 lysX S Uncharacterised conserved protein (DUF2156)
JPOMOPHI_01111 2.3e-162 P Zinc-uptake complex component A periplasmic
JPOMOPHI_01112 2.5e-138 S cobalamin synthesis protein
JPOMOPHI_01113 2.6e-46 rpmB J Ribosomal L28 family
JPOMOPHI_01114 7.5e-49 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JPOMOPHI_01115 2e-42 rpmE2 J Ribosomal protein L31
JPOMOPHI_01116 5.9e-13 rpmJ J Ribosomal protein L36
JPOMOPHI_01117 2.3e-23 J Ribosomal L32p protein family
JPOMOPHI_01118 4.5e-200 ycgR S Predicted permease
JPOMOPHI_01119 8.5e-153 S TIGRFAM TIGR03943 family protein
JPOMOPHI_01120 9.8e-45
JPOMOPHI_01121 8.7e-74 zur P Belongs to the Fur family
JPOMOPHI_01122 6.2e-229 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JPOMOPHI_01123 4.7e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JPOMOPHI_01124 1.1e-178 adh3 C Zinc-binding dehydrogenase
JPOMOPHI_01125 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JPOMOPHI_01127 2.4e-38 S Memo-like protein
JPOMOPHI_01128 3.3e-225 K Putative ATP-dependent DNA helicase recG C-terminal
JPOMOPHI_01129 2.3e-159 K Helix-turn-helix domain, rpiR family
JPOMOPHI_01130 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JPOMOPHI_01131 1.1e-247 dgt 3.1.5.1 F Phosphohydrolase-associated domain
JPOMOPHI_01132 2.6e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JPOMOPHI_01133 3.4e-269 yhdG E aromatic amino acid transport protein AroP K03293
JPOMOPHI_01134 7.1e-94 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JPOMOPHI_01135 1.2e-31 J Acetyltransferase (GNAT) domain
JPOMOPHI_01136 2.3e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
JPOMOPHI_01137 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
JPOMOPHI_01138 2.7e-219 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
JPOMOPHI_01139 4e-192 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
JPOMOPHI_01140 4.4e-109
JPOMOPHI_01141 9.2e-189 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JPOMOPHI_01142 7.5e-155 sapF E ATPases associated with a variety of cellular activities
JPOMOPHI_01143 4e-142 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
JPOMOPHI_01144 1.2e-164 EP Binding-protein-dependent transport system inner membrane component
JPOMOPHI_01145 1.4e-170 P Binding-protein-dependent transport system inner membrane component
JPOMOPHI_01146 3.9e-309 E ABC transporter, substrate-binding protein, family 5
JPOMOPHI_01147 3.6e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JPOMOPHI_01148 5e-273 G Bacterial extracellular solute-binding protein
JPOMOPHI_01149 2.1e-70 G carbohydrate transport
JPOMOPHI_01150 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
JPOMOPHI_01151 1.8e-122 G ABC transporter permease
JPOMOPHI_01152 3.2e-189 K Periplasmic binding protein domain
JPOMOPHI_01153 7.7e-21 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
JPOMOPHI_01154 0.0 3.2.1.51 GH29 G Alpha-L-fucosidase
JPOMOPHI_01155 4.7e-18 L Helix-turn-helix domain
JPOMOPHI_01156 4.4e-18 S Protein of unknown function (DUF2442)
JPOMOPHI_01157 2.6e-16 K Helix-turn-helix domain
JPOMOPHI_01158 4.7e-137 L IstB-like ATP binding protein
JPOMOPHI_01159 1.3e-245 L Transposase
JPOMOPHI_01160 2.9e-107 L Belongs to the 'phage' integrase family
JPOMOPHI_01161 2.6e-52 2.1.1.72, 3.1.21.3 L Type I restriction modification DNA specificity domain
JPOMOPHI_01162 2.3e-244 hsdM 2.1.1.72 V HsdM N-terminal domain
JPOMOPHI_01163 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
JPOMOPHI_01164 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JPOMOPHI_01165 1.5e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
JPOMOPHI_01166 3e-273 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
JPOMOPHI_01167 1.1e-124 XK27_08050 O prohibitin homologues
JPOMOPHI_01168 1.2e-241 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
JPOMOPHI_01169 2.4e-231 metC 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
JPOMOPHI_01170 4.7e-260 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
JPOMOPHI_01171 4e-226 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
JPOMOPHI_01172 0.0 macB_2 V ATPases associated with a variety of cellular activities
JPOMOPHI_01173 0.0 ctpE P E1-E2 ATPase
JPOMOPHI_01174 5.2e-92 K acetyltransferase
JPOMOPHI_01175 3.2e-53 racA K MerR, DNA binding
JPOMOPHI_01176 1.1e-197 yghZ C Aldo/keto reductase family
JPOMOPHI_01177 6.7e-101 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
JPOMOPHI_01178 4.1e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
JPOMOPHI_01179 1.1e-149 map 3.4.11.18 E Methionine aminopeptidase
JPOMOPHI_01180 4.6e-73 S Short repeat of unknown function (DUF308)
JPOMOPHI_01181 4.5e-25 S Short repeat of unknown function (DUF308)
JPOMOPHI_01182 0.0 pepO 3.4.24.71 O Peptidase family M13
JPOMOPHI_01183 1.5e-118 L Single-strand binding protein family
JPOMOPHI_01184 1.7e-102 L Resolvase, N terminal domain
JPOMOPHI_01185 5.6e-178 L Helix-turn-helix domain
JPOMOPHI_01186 1.4e-69
JPOMOPHI_01187 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JPOMOPHI_01190 2.4e-267 recD2 3.6.4.12 L PIF1-like helicase
JPOMOPHI_01191 5.3e-161 supH S Sucrose-6F-phosphate phosphohydrolase
JPOMOPHI_01192 3.7e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
JPOMOPHI_01193 3.4e-69 KT Transcriptional regulatory protein, C terminal
JPOMOPHI_01194 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
JPOMOPHI_01195 3.5e-288 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
JPOMOPHI_01196 1e-191 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
JPOMOPHI_01197 5.2e-116 ywlC 2.7.7.87 J Belongs to the SUA5 family
JPOMOPHI_01198 1.1e-45 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
JPOMOPHI_01199 2.7e-185 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JPOMOPHI_01200 1.2e-189 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JPOMOPHI_01201 3.9e-36 rpmE J Binds the 23S rRNA
JPOMOPHI_01203 3.5e-191 K helix_turn_helix, arabinose operon control protein
JPOMOPHI_01204 2.6e-163 glcU G Sugar transport protein
JPOMOPHI_01205 5.7e-178 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, C-terminal alpha/beta domain
JPOMOPHI_01206 3.5e-257 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
JPOMOPHI_01207 1.3e-101
JPOMOPHI_01208 4.8e-129 S Metallo-beta-lactamase domain protein
JPOMOPHI_01209 1.3e-245 L Transposase
JPOMOPHI_01210 4.7e-137 L IstB-like ATP binding protein
JPOMOPHI_01211 8.3e-170 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
JPOMOPHI_01212 1.2e-141 3.5.2.6 V Beta-lactamase enzyme family
JPOMOPHI_01213 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
JPOMOPHI_01214 1.6e-163 EG EamA-like transporter family
JPOMOPHI_01216 2e-125 V FtsX-like permease family
JPOMOPHI_01217 7.5e-147 S Sulfite exporter TauE/SafE
JPOMOPHI_01219 3.4e-216 MA20_36090 S Psort location Cytoplasmic, score 8.87
JPOMOPHI_01220 3.4e-252 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
JPOMOPHI_01221 2.1e-35 1.1.1.122, 1.1.1.65 C Aldo/keto reductase family
JPOMOPHI_01222 1.2e-72 EGP Major facilitator superfamily
JPOMOPHI_01223 3.7e-179 glkA 2.7.1.2 G ROK family
JPOMOPHI_01224 7.8e-299 S ATPases associated with a variety of cellular activities
JPOMOPHI_01225 1.2e-55 EGP Major facilitator Superfamily
JPOMOPHI_01226 1.1e-158 I alpha/beta hydrolase fold
JPOMOPHI_01227 1.1e-110 S Pyridoxamine 5'-phosphate oxidase
JPOMOPHI_01229 1.3e-55 S DUF218 domain
JPOMOPHI_01230 6.3e-17 S Protein of unknown function (DUF979)
JPOMOPHI_01231 1.7e-114 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JPOMOPHI_01233 5.7e-126
JPOMOPHI_01234 4.2e-57 M domain, Protein
JPOMOPHI_01236 2.4e-306 yjjK S ATP-binding cassette protein, ChvD family
JPOMOPHI_01237 0.0 3.2.1.52, 3.2.1.83 GH16,GH20 G hydrolase family 20, catalytic
JPOMOPHI_01238 2.1e-171 tesB I Thioesterase-like superfamily
JPOMOPHI_01239 2.2e-75 S Protein of unknown function (DUF3180)
JPOMOPHI_01240 5.8e-288 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JPOMOPHI_01241 5.2e-164 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JPOMOPHI_01242 4.5e-100 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
JPOMOPHI_01243 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JPOMOPHI_01244 9.4e-98 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JPOMOPHI_01245 4.3e-211 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JPOMOPHI_01246 2.9e-260 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
JPOMOPHI_01247 6.2e-307
JPOMOPHI_01248 4.9e-168 natA V ATPases associated with a variety of cellular activities
JPOMOPHI_01249 1.3e-232 epsG M Glycosyl transferase family 21
JPOMOPHI_01250 9.6e-273 S AI-2E family transporter
JPOMOPHI_01251 1.9e-177 3.4.14.13 M Glycosyltransferase like family 2
JPOMOPHI_01252 5.2e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
JPOMOPHI_01255 3.5e-65 S Domain of unknown function (DUF4190)
JPOMOPHI_01256 6.9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JPOMOPHI_01257 4e-175 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JPOMOPHI_01259 4.2e-47 S Helix-turn-helix domain
JPOMOPHI_01260 1.7e-268 lacS G Psort location CytoplasmicMembrane, score 10.00
JPOMOPHI_01261 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
JPOMOPHI_01262 5.4e-181 lacR K Transcriptional regulator, LacI family
JPOMOPHI_01263 4e-229 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
JPOMOPHI_01264 3.9e-119 K Transcriptional regulatory protein, C terminal
JPOMOPHI_01265 4.8e-101
JPOMOPHI_01266 1.8e-95 V N-Acetylmuramoyl-L-alanine amidase
JPOMOPHI_01267 1.6e-143 L IstB-like ATP binding protein
JPOMOPHI_01268 5.8e-296 L PFAM Integrase catalytic
JPOMOPHI_01269 3.2e-59 V N-Acetylmuramoyl-L-alanine amidase
JPOMOPHI_01270 7.4e-109 ytrE V ABC transporter
JPOMOPHI_01271 1.5e-171
JPOMOPHI_01273 1.1e-219 vex3 V ABC transporter permease
JPOMOPHI_01274 1e-210 vex1 V Efflux ABC transporter, permease protein
JPOMOPHI_01275 9.9e-112 vex2 V ABC transporter, ATP-binding protein
JPOMOPHI_01276 5.4e-44 azlD E Branched-chain amino acid transport protein (AzlD)
JPOMOPHI_01277 4.8e-196 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
JPOMOPHI_01278 7.6e-94 ptpA 3.1.3.48 T low molecular weight
JPOMOPHI_01279 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
JPOMOPHI_01280 1.9e-174 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JPOMOPHI_01281 5e-72 attW O OsmC-like protein
JPOMOPHI_01282 6e-191 T Universal stress protein family
JPOMOPHI_01283 2.1e-106 M NlpC/P60 family
JPOMOPHI_01284 1.2e-175 usp 3.5.1.28 CBM50 S CHAP domain
JPOMOPHI_01285 3.2e-214 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JPOMOPHI_01286 3.1e-39
JPOMOPHI_01287 7e-218 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
JPOMOPHI_01288 1.7e-117 phoU P Plays a role in the regulation of phosphate uptake
JPOMOPHI_01289 1e-09 EGP Major facilitator Superfamily
JPOMOPHI_01290 4.9e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JPOMOPHI_01291 4.3e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
JPOMOPHI_01292 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
JPOMOPHI_01294 4.3e-217 araJ EGP Major facilitator Superfamily
JPOMOPHI_01295 0.0 S Domain of unknown function (DUF4037)
JPOMOPHI_01296 1.5e-112 S Protein of unknown function (DUF4125)
JPOMOPHI_01297 7.3e-135
JPOMOPHI_01298 3.6e-289 pspC KT PspC domain
JPOMOPHI_01299 2.7e-266 tcsS3 KT PspC domain
JPOMOPHI_01300 9.2e-126 degU K helix_turn_helix, Lux Regulon
JPOMOPHI_01301 5.3e-278 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JPOMOPHI_01303 2.3e-142 pgl 3.1.1.31 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
JPOMOPHI_01304 4.2e-186 opcA G Glucose-6-phosphate dehydrogenase subunit
JPOMOPHI_01305 0.0 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JPOMOPHI_01306 4.5e-99
JPOMOPHI_01307 0.0 nagLU 3.1.4.53, 3.2.1.21, 3.2.1.50 GH3 G Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
JPOMOPHI_01309 3e-240 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JPOMOPHI_01310 0.0 nucH 3.1.3.5 F 5'-nucleotidase, C-terminal domain
JPOMOPHI_01311 6.7e-212 I Diacylglycerol kinase catalytic domain
JPOMOPHI_01312 1.3e-151 arbG K CAT RNA binding domain
JPOMOPHI_01313 0.0 crr G pts system, glucose-specific IIABC component
JPOMOPHI_01315 1.9e-29 M Spy0128-like isopeptide containing domain
JPOMOPHI_01316 1.8e-42 M Spy0128-like isopeptide containing domain
JPOMOPHI_01318 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
JPOMOPHI_01319 4.4e-261 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JPOMOPHI_01320 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
JPOMOPHI_01321 1.4e-203 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JPOMOPHI_01322 5.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JPOMOPHI_01324 2.3e-105
JPOMOPHI_01325 1e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JPOMOPHI_01326 1.8e-229 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
JPOMOPHI_01327 7.6e-236 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JPOMOPHI_01328 4.7e-84 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JPOMOPHI_01329 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JPOMOPHI_01330 2.8e-188 nusA K Participates in both transcription termination and antitermination
JPOMOPHI_01331 1.6e-161
JPOMOPHI_01332 1.7e-33
JPOMOPHI_01334 5e-153 E Transglutaminase/protease-like homologues
JPOMOPHI_01335 0.0 gcs2 S A circularly permuted ATPgrasp
JPOMOPHI_01336 6.4e-173 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JPOMOPHI_01337 0.0 3.2.1.52 GH20 G hydrolase family 20, catalytic
JPOMOPHI_01338 2.8e-64 rplQ J Ribosomal protein L17
JPOMOPHI_01339 8.9e-184 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JPOMOPHI_01340 1.1e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JPOMOPHI_01341 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JPOMOPHI_01342 6.5e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
JPOMOPHI_01343 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JPOMOPHI_01344 3.8e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JPOMOPHI_01345 4.7e-249 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JPOMOPHI_01346 6.1e-63 rplO J binds to the 23S rRNA
JPOMOPHI_01347 1e-24 rpmD J Ribosomal protein L30p/L7e
JPOMOPHI_01348 1.5e-100 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JPOMOPHI_01349 1.1e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JPOMOPHI_01350 2.1e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JPOMOPHI_01351 4.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JPOMOPHI_01352 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JPOMOPHI_01353 2.2e-102 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JPOMOPHI_01354 3.5e-52 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JPOMOPHI_01355 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JPOMOPHI_01356 3.5e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JPOMOPHI_01357 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
JPOMOPHI_01358 5.8e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JPOMOPHI_01359 7.5e-96 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JPOMOPHI_01360 4.3e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JPOMOPHI_01361 4.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JPOMOPHI_01362 4.2e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JPOMOPHI_01363 2.6e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JPOMOPHI_01364 3.9e-119 rplD J Forms part of the polypeptide exit tunnel
JPOMOPHI_01365 4.2e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JPOMOPHI_01366 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
JPOMOPHI_01367 1.4e-58 ywiC S YwiC-like protein
JPOMOPHI_01368 1.5e-86 ywiC S YwiC-like protein
JPOMOPHI_01369 8.7e-167 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
JPOMOPHI_01370 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JPOMOPHI_01371 6.3e-232 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
JPOMOPHI_01372 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
JPOMOPHI_01373 8.8e-68 rpsI J Belongs to the universal ribosomal protein uS9 family
JPOMOPHI_01374 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JPOMOPHI_01375 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
JPOMOPHI_01376 3e-120
JPOMOPHI_01377 6.2e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
JPOMOPHI_01378 1.1e-256 M Bacterial capsule synthesis protein PGA_cap
JPOMOPHI_01380 2.3e-240 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JPOMOPHI_01381 1.9e-225 dapC E Aminotransferase class I and II
JPOMOPHI_01382 9e-61 fdxA C 4Fe-4S binding domain
JPOMOPHI_01383 6.9e-215 murB 1.3.1.98 M Cell wall formation
JPOMOPHI_01384 1.9e-25 rpmG J Ribosomal protein L33
JPOMOPHI_01388 2.7e-51 moxR S ATPase family associated with various cellular activities (AAA)
JPOMOPHI_01389 2.1e-132 bla1 3.5.2.6 V Beta-lactamase enzyme family
JPOMOPHI_01390 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JPOMOPHI_01391 6.3e-148
JPOMOPHI_01392 2e-93 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
JPOMOPHI_01393 1.2e-120 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
JPOMOPHI_01394 3.2e-38 fmdB S Putative regulatory protein
JPOMOPHI_01395 5.6e-110 flgA NO SAF
JPOMOPHI_01396 9.6e-42
JPOMOPHI_01397 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
JPOMOPHI_01398 4.7e-238 T Forkhead associated domain
JPOMOPHI_01400 1.3e-37 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JPOMOPHI_01401 2.1e-88 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JPOMOPHI_01402 5e-182 xynB2 1.1.1.169 E lipolytic protein G-D-S-L family
JPOMOPHI_01403 0.0 guxA1 3.2.1.18, 3.2.1.91 GH33,GH6 G BNR repeat-like domain
JPOMOPHI_01404 8.8e-222 pbuO S Permease family
JPOMOPHI_01405 1.4e-12 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
JPOMOPHI_01406 3.3e-169 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
JPOMOPHI_01407 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JPOMOPHI_01408 6.2e-180 pstA P Phosphate transport system permease
JPOMOPHI_01409 3.8e-171 pstC P probably responsible for the translocation of the substrate across the membrane
JPOMOPHI_01410 3e-172 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
JPOMOPHI_01411 1.3e-128 KT Transcriptional regulatory protein, C terminal
JPOMOPHI_01412 4.2e-245 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
JPOMOPHI_01413 1.2e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JPOMOPHI_01414 1.4e-239 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JPOMOPHI_01415 1.8e-107 K helix_turn_helix, Arsenical Resistance Operon Repressor
JPOMOPHI_01416 8.1e-244 EGP Major facilitator Superfamily
JPOMOPHI_01417 3.3e-219 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JPOMOPHI_01418 2.2e-169 L Excalibur calcium-binding domain
JPOMOPHI_01419 3.2e-269 pepC 3.4.22.40 E Peptidase C1-like family
JPOMOPHI_01420 7.6e-46 D nuclear chromosome segregation
JPOMOPHI_01421 8e-128 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JPOMOPHI_01422 4.2e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
JPOMOPHI_01423 1.8e-187 yfiH Q Multi-copper polyphenol oxidoreductase laccase
JPOMOPHI_01424 0.0 yegQ O Peptidase family U32 C-terminal domain
JPOMOPHI_01425 3.6e-94 L Transposase and inactivated derivatives IS30 family
JPOMOPHI_01426 4.6e-168 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
JPOMOPHI_01427 2.2e-41 nrdH O Glutaredoxin
JPOMOPHI_01428 1.5e-98 nrdI F Probably involved in ribonucleotide reductase function
JPOMOPHI_01429 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JPOMOPHI_01430 1.8e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JPOMOPHI_01431 1e-73 megL 2.5.1.48, 4.4.1.1, 4.4.1.11, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
JPOMOPHI_01432 0.0 S Predicted membrane protein (DUF2207)
JPOMOPHI_01433 1e-91 lemA S LemA family
JPOMOPHI_01434 2.1e-115 xylR K purine nucleotide biosynthetic process
JPOMOPHI_01435 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
JPOMOPHI_01436 3e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JPOMOPHI_01437 2.9e-117
JPOMOPHI_01438 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
JPOMOPHI_01440 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
JPOMOPHI_01441 1.1e-98 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JPOMOPHI_01442 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
JPOMOPHI_01443 7.2e-308 pccB I Carboxyl transferase domain
JPOMOPHI_01444 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
JPOMOPHI_01445 1.6e-92 bioY S BioY family
JPOMOPHI_01446 1.6e-149 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
JPOMOPHI_01447 0.0
JPOMOPHI_01448 2.3e-145 QT PucR C-terminal helix-turn-helix domain
JPOMOPHI_01449 2.8e-131 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
JPOMOPHI_01450 8.7e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
JPOMOPHI_01451 1.5e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JPOMOPHI_01452 2.7e-166 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JPOMOPHI_01453 0.0 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JPOMOPHI_01454 1.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JPOMOPHI_01455 4.6e-62 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JPOMOPHI_01456 1.2e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JPOMOPHI_01458 8.6e-145 atpB C it plays a direct role in the translocation of protons across the membrane
JPOMOPHI_01459 4.1e-208 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JPOMOPHI_01461 9.2e-36
JPOMOPHI_01462 0.0 K RNA polymerase II activating transcription factor binding
JPOMOPHI_01463 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
JPOMOPHI_01464 5.2e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
JPOMOPHI_01466 1.3e-102 mntP P Probably functions as a manganese efflux pump
JPOMOPHI_01467 1.4e-125
JPOMOPHI_01468 2e-135 KT Transcriptional regulatory protein, C terminal
JPOMOPHI_01469 3e-127 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JPOMOPHI_01470 8.1e-293 E Bacterial extracellular solute-binding proteins, family 5 Middle
JPOMOPHI_01471 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JPOMOPHI_01472 0.0 S domain protein
JPOMOPHI_01473 4.7e-73 tyrA 5.4.99.5 E Chorismate mutase type II
JPOMOPHI_01474 3.1e-90 lrp_3 K helix_turn_helix ASNC type
JPOMOPHI_01475 7.2e-236 E Aminotransferase class I and II
JPOMOPHI_01476 5.1e-306 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JPOMOPHI_01477 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
JPOMOPHI_01478 2.5e-52 S Protein of unknown function (DUF2469)
JPOMOPHI_01479 8.7e-198 2.3.1.57 J Acetyltransferase (GNAT) domain
JPOMOPHI_01480 1.9e-286 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JPOMOPHI_01481 9.2e-289 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JPOMOPHI_01482 6.2e-48 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JPOMOPHI_01483 7.2e-60 V ABC transporter
JPOMOPHI_01484 1.5e-37 V ABC transporter
JPOMOPHI_01485 2.2e-154 spoU 2.1.1.185 J RNA methyltransferase TrmH family
JPOMOPHI_01486 5.9e-129 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JPOMOPHI_01487 1.3e-214 rmuC S RmuC family
JPOMOPHI_01488 9.6e-43 csoR S Metal-sensitive transcriptional repressor
JPOMOPHI_01489 0.0 pacS 3.6.3.54 P E1-E2 ATPase
JPOMOPHI_01490 0.0 ubiB S ABC1 family
JPOMOPHI_01491 3.5e-19 S granule-associated protein
JPOMOPHI_01492 7.5e-143 cobQ S CobB/CobQ-like glutamine amidotransferase domain
JPOMOPHI_01493 3.7e-277 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
JPOMOPHI_01494 7.5e-258 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
JPOMOPHI_01495 1.6e-250 dinF V MatE
JPOMOPHI_01496 2.2e-19 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
JPOMOPHI_01497 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
JPOMOPHI_01498 1e-54 glnB K Nitrogen regulatory protein P-II
JPOMOPHI_01499 2.9e-219 amt U Ammonium Transporter Family
JPOMOPHI_01500 2.6e-193 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JPOMOPHI_01502 1.2e-116 icaR K Bacterial regulatory proteins, tetR family
JPOMOPHI_01503 2.8e-196 XK27_01805 M Glycosyltransferase like family 2
JPOMOPHI_01504 0.0 S Glycosyl hydrolases related to GH101 family, GH129
JPOMOPHI_01505 1e-303 pepD E Peptidase family C69
JPOMOPHI_01506 8.7e-69 XK26_04485 P Cobalt transport protein
JPOMOPHI_01507 9.8e-82
JPOMOPHI_01508 0.0 V ABC transporter transmembrane region
JPOMOPHI_01509 1.8e-301 V ABC transporter, ATP-binding protein
JPOMOPHI_01510 1.7e-81 K Winged helix DNA-binding domain
JPOMOPHI_01511 9.8e-15
JPOMOPHI_01512 9.9e-281 M LPXTG cell wall anchor motif
JPOMOPHI_01513 0.0 M chlorophyll binding
JPOMOPHI_01514 9.3e-178 3.4.22.70 M Sortase family
JPOMOPHI_01516 5.1e-09 S Sucrose-6F-phosphate phosphohydrolase
JPOMOPHI_01517 2.1e-162 S Sucrose-6F-phosphate phosphohydrolase
JPOMOPHI_01518 1e-240 S Putative ABC-transporter type IV
JPOMOPHI_01519 7e-81
JPOMOPHI_01520 1.6e-35 Q phosphatase activity
JPOMOPHI_01521 6.8e-294 bglA 3.2.1.86 GT1 G Glycosyl hydrolase family 1
JPOMOPHI_01522 3.1e-40 celC 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
JPOMOPHI_01523 4.3e-49 celA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
JPOMOPHI_01524 2.1e-249 gmuC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JPOMOPHI_01525 3e-66 S haloacid dehalogenase-like hydrolase
JPOMOPHI_01526 3.6e-131 yydK K UTRA
JPOMOPHI_01527 1.3e-70 S FMN_bind
JPOMOPHI_01528 5.7e-149 macB V ABC transporter, ATP-binding protein
JPOMOPHI_01529 2.6e-204 Z012_06715 V FtsX-like permease family
JPOMOPHI_01530 4.8e-222 macB_2 V ABC transporter permease
JPOMOPHI_01531 9.2e-234 S Predicted membrane protein (DUF2318)
JPOMOPHI_01532 1.8e-106 tpd P Fe2+ transport protein
JPOMOPHI_01533 4.6e-308 efeU_1 P Iron permease FTR1 family
JPOMOPHI_01534 5.9e-22 G MFS/sugar transport protein
JPOMOPHI_01535 1.1e-200 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JPOMOPHI_01536 5.4e-57 S Fic/DOC family
JPOMOPHI_01537 1.3e-32 S Fic/DOC family
JPOMOPHI_01538 3.6e-291 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JPOMOPHI_01539 5e-38 ptsH G PTS HPr component phosphorylation site
JPOMOPHI_01540 4.4e-200 K helix_turn _helix lactose operon repressor
JPOMOPHI_01541 3.5e-211 holB 2.7.7.7 L DNA polymerase III
JPOMOPHI_01542 1.3e-118 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JPOMOPHI_01543 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JPOMOPHI_01544 2.3e-188 3.6.1.27 I PAP2 superfamily
JPOMOPHI_01545 0.0 vpr M PA domain
JPOMOPHI_01546 8e-123 yplQ S Haemolysin-III related
JPOMOPHI_01547 5.4e-233 glf 5.4.99.9 M UDP-galactopyranose mutase
JPOMOPHI_01548 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
JPOMOPHI_01549 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JPOMOPHI_01550 3.5e-279 S Calcineurin-like phosphoesterase
JPOMOPHI_01551 3e-15 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
JPOMOPHI_01552 2.9e-284 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
JPOMOPHI_01553 1.7e-116
JPOMOPHI_01554 1.7e-212 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JPOMOPHI_01556 1.8e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
JPOMOPHI_01557 2e-135 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
JPOMOPHI_01558 6.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JPOMOPHI_01559 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
JPOMOPHI_01560 3.5e-213 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
JPOMOPHI_01561 3.1e-57 S TIGRFAM helicase secretion neighborhood TadE-like protein
JPOMOPHI_01562 5.3e-54 U TadE-like protein
JPOMOPHI_01563 9.3e-41 S Protein of unknown function (DUF4244)
JPOMOPHI_01564 3.2e-15 gspF NU Type II secretion system (T2SS), protein F
JPOMOPHI_01565 1.7e-15 gspF NU Type II secretion system (T2SS), protein F
JPOMOPHI_01566 1.3e-117 U Type ii secretion system
JPOMOPHI_01567 3.4e-191 cpaF U Type II IV secretion system protein
JPOMOPHI_01568 2.6e-152 cpaE D bacterial-type flagellum organization
JPOMOPHI_01569 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JPOMOPHI_01570 6.3e-201 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
JPOMOPHI_01571 5e-91
JPOMOPHI_01572 1.7e-45 cbiM P PDGLE domain
JPOMOPHI_01573 8.2e-28 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
JPOMOPHI_01574 4.5e-208 S Glycosyltransferase, group 2 family protein
JPOMOPHI_01575 1.5e-261
JPOMOPHI_01577 8.7e-27 thiS 2.8.1.10 H ThiS family
JPOMOPHI_01578 1.6e-163 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
JPOMOPHI_01579 0.0 S Psort location Cytoplasmic, score 8.87
JPOMOPHI_01580 5.3e-28 gtrB GT2 M Glycosyl transferase family 2
JPOMOPHI_01581 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
JPOMOPHI_01582 6.9e-246 V ABC transporter permease
JPOMOPHI_01583 9e-184 V ABC transporter
JPOMOPHI_01584 7.9e-137 T HD domain
JPOMOPHI_01585 3e-164 S Glutamine amidotransferase domain
JPOMOPHI_01586 0.0 kup P Transport of potassium into the cell
JPOMOPHI_01587 3.8e-184 tatD L TatD related DNase
JPOMOPHI_01588 2.9e-207 xylR 5.3.1.12 G MFS/sugar transport protein
JPOMOPHI_01589 1.5e-54 xylR 5.3.1.12 G MFS/sugar transport protein
JPOMOPHI_01591 3.4e-83 K Transcriptional regulator
JPOMOPHI_01592 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JPOMOPHI_01593 1.6e-130
JPOMOPHI_01594 1.5e-58
JPOMOPHI_01595 4e-168 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JPOMOPHI_01596 7.7e-126 dedA S SNARE associated Golgi protein
JPOMOPHI_01598 1.6e-134 S HAD hydrolase, family IA, variant 3
JPOMOPHI_01599 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR Asp-box repeat
JPOMOPHI_01600 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR repeat-like domain
JPOMOPHI_01601 5.2e-87 hspR K transcriptional regulator, MerR family
JPOMOPHI_01602 3.3e-170 dnaJ1 O DnaJ molecular chaperone homology domain
JPOMOPHI_01603 5.3e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JPOMOPHI_01604 0.0 dnaK O Heat shock 70 kDa protein
JPOMOPHI_01605 0.0 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
JPOMOPHI_01606 2.9e-190 K Psort location Cytoplasmic, score
JPOMOPHI_01607 1.9e-08 traX S TraX protein
JPOMOPHI_01609 1.8e-138 G Phosphoglycerate mutase family
JPOMOPHI_01610 9.6e-69 S Protein of unknown function (DUF4235)
JPOMOPHI_01611 2.5e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
JPOMOPHI_01612 4.1e-45
JPOMOPHI_01614 1.5e-157 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
JPOMOPHI_01615 1.8e-14 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
JPOMOPHI_01617 1.7e-142 cobB2 K Sir2 family
JPOMOPHI_01618 2.2e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
JPOMOPHI_01619 1.2e-82 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JPOMOPHI_01620 1.5e-143 ypfH S Phospholipase/Carboxylesterase
JPOMOPHI_01621 0.0 yjcE P Sodium/hydrogen exchanger family
JPOMOPHI_01622 5.3e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
JPOMOPHI_01623 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
JPOMOPHI_01624 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
JPOMOPHI_01626 9.9e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JPOMOPHI_01627 1e-270 KLT Domain of unknown function (DUF4032)
JPOMOPHI_01628 1.7e-154
JPOMOPHI_01629 8.3e-158 3.4.22.70 M Sortase family
JPOMOPHI_01630 1.7e-221 M LPXTG-motif cell wall anchor domain protein
JPOMOPHI_01631 0.0 S LPXTG-motif cell wall anchor domain protein
JPOMOPHI_01632 6.6e-104 L Helix-turn-helix domain
JPOMOPHI_01633 3.3e-211 ugpC E Belongs to the ABC transporter superfamily
JPOMOPHI_01634 2.9e-173 K Psort location Cytoplasmic, score
JPOMOPHI_01635 0.0 KLT Protein tyrosine kinase
JPOMOPHI_01636 1.4e-150 O Thioredoxin
JPOMOPHI_01638 1.1e-211 S G5
JPOMOPHI_01639 7e-170 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JPOMOPHI_01640 1.2e-167 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JPOMOPHI_01641 6.7e-113 S LytR cell envelope-related transcriptional attenuator
JPOMOPHI_01642 1e-278 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
JPOMOPHI_01643 5.2e-124 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
JPOMOPHI_01644 0.0 M Conserved repeat domain
JPOMOPHI_01645 0.0 murJ KLT MviN-like protein
JPOMOPHI_01646 1e-202 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JPOMOPHI_01647 6.1e-244 parB K Belongs to the ParB family
JPOMOPHI_01648 1.2e-177 parA D CobQ CobB MinD ParA nucleotide binding domain protein
JPOMOPHI_01649 1.7e-125 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
JPOMOPHI_01650 1.5e-92 jag S Putative single-stranded nucleic acids-binding domain
JPOMOPHI_01651 1e-171 yidC U Membrane protein insertase, YidC Oxa1 family
JPOMOPHI_01652 4.5e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
JPOMOPHI_01653 4.1e-300 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JPOMOPHI_01654 6e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JPOMOPHI_01655 2.1e-241 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JPOMOPHI_01656 3.1e-88 S Protein of unknown function (DUF721)
JPOMOPHI_01657 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JPOMOPHI_01658 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JPOMOPHI_01659 1.2e-73 S Transmembrane domain of unknown function (DUF3566)
JPOMOPHI_01660 2.5e-13 abfA1 3.2.1.55 GH51 G arabinose metabolic process
JPOMOPHI_01661 1.2e-06 S Parallel beta-helix repeats
JPOMOPHI_01662 2.3e-186 G Glycosyl hydrolases family 43
JPOMOPHI_01663 6.1e-187 K Periplasmic binding protein domain
JPOMOPHI_01664 6.1e-229 I Serine aminopeptidase, S33
JPOMOPHI_01665 6.7e-09 K helix_turn _helix lactose operon repressor
JPOMOPHI_01667 1.9e-24 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
JPOMOPHI_01668 2.3e-259 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
JPOMOPHI_01669 4.1e-93 gntR K FCD
JPOMOPHI_01670 2.5e-50 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JPOMOPHI_01671 0.0 3.2.1.55 GH51 G arabinose metabolic process
JPOMOPHI_01674 0.0 G Glycosyl hydrolase family 20, domain 2
JPOMOPHI_01675 5.7e-189 K helix_turn _helix lactose operon repressor
JPOMOPHI_01676 8.6e-78 ulaC 2.7.1.194, 2.7.1.197, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JPOMOPHI_01677 3.3e-40 ulaC 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
JPOMOPHI_01678 1.6e-261 ulaA 2.7.1.194 S PTS system sugar-specific permease component
JPOMOPHI_01679 2.3e-136 S Protein of unknown function DUF45
JPOMOPHI_01680 1.9e-83 dps P Belongs to the Dps family
JPOMOPHI_01681 7.6e-189 yddG EG EamA-like transporter family
JPOMOPHI_01682 1.2e-241 ytfL P Transporter associated domain
JPOMOPHI_01683 2.8e-76 K helix_turn _helix lactose operon repressor
JPOMOPHI_01684 4.4e-118 cah 4.2.1.1 P Reversible hydration of carbon dioxide
JPOMOPHI_01685 2.9e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
JPOMOPHI_01686 0.0 trxB1 1.8.1.9 C Thioredoxin domain
JPOMOPHI_01687 1.9e-308 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
JPOMOPHI_01688 2.2e-235 yhjX EGP Major facilitator Superfamily
JPOMOPHI_01689 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JPOMOPHI_01690 0.0 yjjP S Threonine/Serine exporter, ThrE
JPOMOPHI_01691 1.2e-178 S Amidohydrolase family
JPOMOPHI_01692 2.2e-193 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
JPOMOPHI_01693 6.5e-204 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
JPOMOPHI_01694 1e-47 S Protein of unknown function (DUF3073)
JPOMOPHI_01695 5.2e-87 K LytTr DNA-binding domain
JPOMOPHI_01696 2.5e-13 T protein histidine kinase activity
JPOMOPHI_01697 4.8e-76 T protein histidine kinase activity
JPOMOPHI_01698 1.2e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
JPOMOPHI_01699 1.7e-27 I transferase activity, transferring acyl groups other than amino-acyl groups
JPOMOPHI_01700 0.0 lytC 2.1.1.197, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
JPOMOPHI_01701 2.3e-173 rfbJ M Glycosyl transferase family 2
JPOMOPHI_01702 0.0
JPOMOPHI_01703 2.1e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
JPOMOPHI_01704 0.0 3.6.4.12 K Putative DNA-binding domain
JPOMOPHI_01705 3.9e-289 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
JPOMOPHI_01706 1.6e-42 L Transposase DDE domain
JPOMOPHI_01707 1.7e-16 L Transposase
JPOMOPHI_01708 1.1e-139 L HTH-like domain
JPOMOPHI_01709 2.5e-155 L Transposase, Mutator family
JPOMOPHI_01710 1.2e-168 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JPOMOPHI_01711 7.4e-130 rgpC U Transport permease protein
JPOMOPHI_01712 1.3e-208 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
JPOMOPHI_01713 2.5e-294 S Tetratricopeptide repeat
JPOMOPHI_01714 0.0 rgpF M Rhamnan synthesis protein F
JPOMOPHI_01715 4.9e-193 M Glycosyltransferase like family 2
JPOMOPHI_01716 2.8e-196 L Transposase and inactivated derivatives IS30 family
JPOMOPHI_01717 4.4e-258 S Domain of unknown function (DUF4143)
JPOMOPHI_01718 1.7e-16 yccF S Inner membrane component domain
JPOMOPHI_01719 4.5e-12
JPOMOPHI_01720 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
JPOMOPHI_01721 9.6e-42 tnp7109-21 L Integrase core domain
JPOMOPHI_01722 2.3e-56 L IstB-like ATP binding protein
JPOMOPHI_01723 4.4e-74 V ATPases associated with a variety of cellular activities
JPOMOPHI_01724 5.8e-73 I Sterol carrier protein
JPOMOPHI_01725 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
JPOMOPHI_01726 3.4e-35
JPOMOPHI_01727 1.2e-143 gluP 3.4.21.105 S Rhomboid family
JPOMOPHI_01728 1.8e-117 L HTH-like domain
JPOMOPHI_01729 6.4e-254 L ribosomal rna small subunit methyltransferase
JPOMOPHI_01730 2.6e-66 crgA D Involved in cell division
JPOMOPHI_01731 7.9e-143 S Bacterial protein of unknown function (DUF881)
JPOMOPHI_01732 4.4e-233 srtA 3.4.22.70 M Sortase family
JPOMOPHI_01733 3.4e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
JPOMOPHI_01734 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
JPOMOPHI_01735 2e-183 T Protein tyrosine kinase
JPOMOPHI_01736 3.7e-263 pbpA M penicillin-binding protein
JPOMOPHI_01737 6.8e-265 rodA D Belongs to the SEDS family
JPOMOPHI_01738 3.7e-259 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
JPOMOPHI_01739 7.9e-94 fhaB T Inner membrane component of T3SS, cytoplasmic domain
JPOMOPHI_01740 1e-130 fhaA T Protein of unknown function (DUF2662)
JPOMOPHI_01741 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
JPOMOPHI_01742 0.0 pip S YhgE Pip domain protein
JPOMOPHI_01743 0.0 pip S YhgE Pip domain protein
JPOMOPHI_01744 4.3e-205 pldB 3.1.1.5 I Serine aminopeptidase, S33
JPOMOPHI_01745 2.8e-166 yicL EG EamA-like transporter family
JPOMOPHI_01746 2.6e-103
JPOMOPHI_01748 5.4e-197 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JPOMOPHI_01750 0.0 KL Domain of unknown function (DUF3427)
JPOMOPHI_01751 3.2e-89 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
JPOMOPHI_01752 3.3e-41 D DivIVA domain protein
JPOMOPHI_01753 2.7e-52 ybjQ S Putative heavy-metal-binding
JPOMOPHI_01754 1.1e-155 I Serine aminopeptidase, S33
JPOMOPHI_01755 7e-86 yjcF Q Acetyltransferase (GNAT) domain
JPOMOPHI_01757 4.9e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
JPOMOPHI_01758 2.4e-231 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
JPOMOPHI_01759 0.0 cadA P E1-E2 ATPase
JPOMOPHI_01760 1.6e-271 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
JPOMOPHI_01761 7.6e-169 htpX O Belongs to the peptidase M48B family
JPOMOPHI_01763 3.2e-25 S Putative lactococcus lactis phage r1t holin
JPOMOPHI_01764 6.2e-122 3.5.1.28 M NLP P60 protein
JPOMOPHI_01765 7.4e-55 S SPP1 phage holin
JPOMOPHI_01767 1e-41
JPOMOPHI_01768 4.4e-86 L DNA integration
JPOMOPHI_01769 6.6e-27
JPOMOPHI_01771 1.2e-79 S Psort location Cytoplasmic, score
JPOMOPHI_01772 4.3e-59
JPOMOPHI_01773 3.7e-84 NT phage tail tape measure protein
JPOMOPHI_01775 1.4e-17
JPOMOPHI_01776 2.5e-65 eae N domain, Protein
JPOMOPHI_01777 1.6e-37
JPOMOPHI_01778 2.3e-07
JPOMOPHI_01779 1.1e-29
JPOMOPHI_01780 1.2e-14 S Phage protein Gp19/Gp15/Gp42
JPOMOPHI_01781 2.6e-148 S Phage capsid family
JPOMOPHI_01782 8e-29
JPOMOPHI_01783 3.9e-45
JPOMOPHI_01784 7.7e-86 S Phage portal protein, SPP1 Gp6-like
JPOMOPHI_01785 5.5e-150 S Terminase
JPOMOPHI_01786 1.2e-13
JPOMOPHI_01789 3.9e-12
JPOMOPHI_01790 2e-65 1.8.4.10, 1.8.4.8 EH sulfate reduction
JPOMOPHI_01791 1.7e-12 L Phage plasmid primase, P4 family domain protein
JPOMOPHI_01792 2.8e-17 V HNH nucleases
JPOMOPHI_01794 2.1e-100
JPOMOPHI_01800 1.3e-25 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
JPOMOPHI_01801 1.6e-35 V HNH endonuclease
JPOMOPHI_01803 4e-65 K ParB-like nuclease domain
JPOMOPHI_01805 2.2e-11
JPOMOPHI_01806 2.8e-48 ssb1 L Single-stranded DNA-binding protein
JPOMOPHI_01814 5.9e-86 S KilA-N
JPOMOPHI_01815 8e-35
JPOMOPHI_01816 2.9e-68
JPOMOPHI_01817 2.7e-60
JPOMOPHI_01818 9.4e-113 int8 L Phage integrase family
JPOMOPHI_01819 3e-309 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
JPOMOPHI_01820 3e-31 S Bacterial mobilisation protein (MobC)
JPOMOPHI_01821 6.7e-127 S Domain of unknown function (DUF4417)
JPOMOPHI_01823 1.9e-61
JPOMOPHI_01824 1e-60
JPOMOPHI_01825 2e-12 E IrrE N-terminal-like domain
JPOMOPHI_01826 4.9e-57 K Cro/C1-type HTH DNA-binding domain
JPOMOPHI_01827 5.3e-245 3.5.1.104 G Polysaccharide deacetylase
JPOMOPHI_01828 2.1e-199 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
JPOMOPHI_01829 1.9e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JPOMOPHI_01830 3.1e-162 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JPOMOPHI_01831 1.9e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JPOMOPHI_01832 2e-194 K helix_turn _helix lactose operon repressor
JPOMOPHI_01833 1.6e-73 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
JPOMOPHI_01834 5e-296 scrT G Transporter major facilitator family protein
JPOMOPHI_01835 3.3e-253 yhjE EGP Sugar (and other) transporter
JPOMOPHI_01836 2.8e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JPOMOPHI_01837 1.7e-201 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JPOMOPHI_01838 8.8e-184 gmk 1.1.1.23, 2.7.4.8 S Protein of unknown function (DUF559)
JPOMOPHI_01839 0.0 lacZ 3.2.1.23 G Psort location Cytoplasmic, score 8.87
JPOMOPHI_01840 1.3e-274 aroP E aromatic amino acid transport protein AroP K03293
JPOMOPHI_01841 2.4e-101 K Transcriptional regulator C-terminal region
JPOMOPHI_01842 2.6e-129 V ABC transporter
JPOMOPHI_01843 0.0 V FtsX-like permease family
JPOMOPHI_01844 8.6e-84 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JPOMOPHI_01845 3e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JPOMOPHI_01846 9.9e-39 E ABC transporter
JPOMOPHI_01847 7.6e-100 bcp 1.11.1.15 O Redoxin
JPOMOPHI_01848 1.1e-157 S Virulence factor BrkB
JPOMOPHI_01849 2.1e-41 XAC3035 O Glutaredoxin
JPOMOPHI_01850 4.8e-48

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)