ORF_ID e_value Gene_name EC_number CAZy COGs Description
DMIJIMIF_00001 7.8e-236 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DMIJIMIF_00002 1.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DMIJIMIF_00003 2.6e-35 yaaA S S4 domain protein YaaA
DMIJIMIF_00004 6.2e-210 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DMIJIMIF_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DMIJIMIF_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DMIJIMIF_00007 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
DMIJIMIF_00008 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DMIJIMIF_00009 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DMIJIMIF_00010 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
DMIJIMIF_00011 5.7e-69 rplI J Binds to the 23S rRNA
DMIJIMIF_00012 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
DMIJIMIF_00013 3.5e-166 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
DMIJIMIF_00014 4.6e-166 degV S DegV family
DMIJIMIF_00015 1.2e-168 scrK 2.7.1.2, 2.7.1.4 GK ROK family
DMIJIMIF_00017 3.5e-15 S Transglycosylase associated protein
DMIJIMIF_00018 1.6e-230 I Protein of unknown function (DUF2974)
DMIJIMIF_00019 9.8e-121 yhiD S MgtC family
DMIJIMIF_00022 4.2e-127
DMIJIMIF_00023 1.2e-28
DMIJIMIF_00024 1.4e-06 S LPXTG cell wall anchor motif
DMIJIMIF_00025 1.7e-145 S Putative ABC-transporter type IV
DMIJIMIF_00027 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DMIJIMIF_00028 1.8e-37 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DMIJIMIF_00029 0.0 oppA E ABC transporter substrate-binding protein
DMIJIMIF_00030 3.2e-176 K AI-2E family transporter
DMIJIMIF_00031 6.8e-104 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
DMIJIMIF_00032 6.9e-18
DMIJIMIF_00033 2.3e-248 G Major Facilitator
DMIJIMIF_00034 8.8e-81 E Zn peptidase
DMIJIMIF_00035 1e-41 ps115 K Helix-turn-helix XRE-family like proteins
DMIJIMIF_00036 6.8e-43
DMIJIMIF_00037 2e-52 S Bacteriocin helveticin-J
DMIJIMIF_00038 1.3e-37
DMIJIMIF_00039 4.4e-45
DMIJIMIF_00040 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
DMIJIMIF_00041 2.9e-117 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
DMIJIMIF_00042 1.7e-174 ABC-SBP S ABC transporter
DMIJIMIF_00043 1.3e-288 V ABC-type multidrug transport system, ATPase and permease components
DMIJIMIF_00044 6.4e-148 ropB K Helix-turn-helix domain
DMIJIMIF_00045 1.1e-135 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DMIJIMIF_00046 5.5e-87
DMIJIMIF_00047 2.7e-74 M LysM domain
DMIJIMIF_00049 1.4e-82
DMIJIMIF_00050 4e-118 K Helix-turn-helix domain
DMIJIMIF_00051 0.0 tetP J elongation factor G
DMIJIMIF_00052 8.7e-145 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
DMIJIMIF_00053 6.8e-51
DMIJIMIF_00055 8.7e-72 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DMIJIMIF_00056 1.9e-132 EGP Major facilitator Superfamily
DMIJIMIF_00057 6.2e-193 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DMIJIMIF_00060 5.3e-158 xth 3.1.11.2 L exodeoxyribonuclease III
DMIJIMIF_00061 5.1e-273 E amino acid
DMIJIMIF_00062 0.0 L Helicase C-terminal domain protein
DMIJIMIF_00063 6.2e-205 pbpX1 V Beta-lactamase
DMIJIMIF_00064 4.6e-227 N Uncharacterized conserved protein (DUF2075)
DMIJIMIF_00065 1.2e-70 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
DMIJIMIF_00066 1.2e-85 S COG NOG38524 non supervised orthologous group
DMIJIMIF_00070 1.2e-85 S COG NOG38524 non supervised orthologous group
DMIJIMIF_00073 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
DMIJIMIF_00074 1.4e-36 S Cytochrome B5
DMIJIMIF_00075 3e-167 arbZ I Phosphate acyltransferases
DMIJIMIF_00076 1.6e-182 arbY M Glycosyl transferase family 8
DMIJIMIF_00077 3.4e-185 arbY M Glycosyl transferase family 8
DMIJIMIF_00078 6.9e-156 arbx M Glycosyl transferase family 8
DMIJIMIF_00079 1.2e-148 arbV 2.3.1.51 I Acyl-transferase
DMIJIMIF_00081 4.9e-34
DMIJIMIF_00083 4.8e-131 K response regulator
DMIJIMIF_00084 2.2e-305 vicK 2.7.13.3 T Histidine kinase
DMIJIMIF_00085 1.3e-257 yycH S YycH protein
DMIJIMIF_00086 2.9e-148 yycI S YycH protein
DMIJIMIF_00087 1.4e-147 vicX 3.1.26.11 S domain protein
DMIJIMIF_00088 3.3e-151 htrA 3.4.21.107 O serine protease
DMIJIMIF_00089 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DMIJIMIF_00090 8.8e-29 S SLAP domain
DMIJIMIF_00091 7.5e-163 M NlpC/P60 family
DMIJIMIF_00092 1.3e-91 G Peptidase_C39 like family
DMIJIMIF_00093 1e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
DMIJIMIF_00094 6.2e-77 P Cobalt transport protein
DMIJIMIF_00095 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
DMIJIMIF_00096 7.9e-174 K helix_turn_helix, arabinose operon control protein
DMIJIMIF_00097 1.2e-74 K Helix-turn-helix domain
DMIJIMIF_00098 1.4e-32 K Helix-turn-helix domain
DMIJIMIF_00099 4.1e-87
DMIJIMIF_00101 9.1e-139 L COG2826 Transposase and inactivated derivatives, IS30 family
DMIJIMIF_00102 2.9e-76 M LysM domain
DMIJIMIF_00103 2.1e-83
DMIJIMIF_00104 2.4e-156 htpX O Belongs to the peptidase M48B family
DMIJIMIF_00105 2.7e-97 lemA S LemA family
DMIJIMIF_00106 3.9e-196 ybiR P Citrate transporter
DMIJIMIF_00107 2.7e-70 S Iron-sulphur cluster biosynthesis
DMIJIMIF_00108 1.9e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
DMIJIMIF_00109 1.2e-17
DMIJIMIF_00110 6.3e-101
DMIJIMIF_00112 1.1e-162 ydaM M Glycosyl transferase
DMIJIMIF_00113 2.2e-43 ydaM M Glycosyl transferase
DMIJIMIF_00114 6.2e-178 G Glycosyl hydrolases family 8
DMIJIMIF_00115 1.4e-121 yfbR S HD containing hydrolase-like enzyme
DMIJIMIF_00116 1.5e-155 L HNH nucleases
DMIJIMIF_00117 1.2e-137 S Protein of unknown function (DUF805)
DMIJIMIF_00118 3.1e-136 glnQ E ABC transporter, ATP-binding protein
DMIJIMIF_00119 2.4e-284 glnP P ABC transporter permease
DMIJIMIF_00120 6.3e-119 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
DMIJIMIF_00121 2e-64 yeaO S Protein of unknown function, DUF488
DMIJIMIF_00122 9.6e-125 terC P Integral membrane protein TerC family
DMIJIMIF_00123 3.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
DMIJIMIF_00124 3.8e-133 cobB K SIR2 family
DMIJIMIF_00125 4.2e-86
DMIJIMIF_00126 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DMIJIMIF_00127 1.3e-181 S Alpha/beta hydrolase of unknown function (DUF915)
DMIJIMIF_00128 8.8e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DMIJIMIF_00129 4.4e-140 ypuA S Protein of unknown function (DUF1002)
DMIJIMIF_00130 8.3e-156 epsV 2.7.8.12 S glycosyl transferase family 2
DMIJIMIF_00131 1.5e-126 S Alpha/beta hydrolase family
DMIJIMIF_00132 6.8e-148 K Helix-turn-helix domain
DMIJIMIF_00133 3.9e-18
DMIJIMIF_00134 3.7e-59
DMIJIMIF_00136 8.4e-200 EGP Major Facilitator Superfamily
DMIJIMIF_00137 5.9e-140 noxC 1.5.1.39 C coenzyme F420-1:gamma-L-glutamate ligase activity
DMIJIMIF_00138 1.3e-117
DMIJIMIF_00140 2.6e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DMIJIMIF_00141 3.8e-125 luxT K Bacterial regulatory proteins, tetR family
DMIJIMIF_00142 2.8e-135
DMIJIMIF_00143 1.3e-258 glnPH2 P ABC transporter permease
DMIJIMIF_00144 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DMIJIMIF_00145 5.8e-225 S Cysteine-rich secretory protein family
DMIJIMIF_00146 1.8e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
DMIJIMIF_00147 8.9e-112
DMIJIMIF_00148 1.4e-201 yibE S overlaps another CDS with the same product name
DMIJIMIF_00149 1.7e-129 yibF S overlaps another CDS with the same product name
DMIJIMIF_00150 3.4e-144 I alpha/beta hydrolase fold
DMIJIMIF_00151 0.0 G Belongs to the glycosyl hydrolase 31 family
DMIJIMIF_00152 3.5e-216 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
DMIJIMIF_00153 6.6e-60 K Helix-turn-helix XRE-family like proteins
DMIJIMIF_00154 5.8e-21
DMIJIMIF_00155 3.1e-27
DMIJIMIF_00156 1.7e-32
DMIJIMIF_00157 1.1e-38
DMIJIMIF_00159 9.1e-139 L COG2826 Transposase and inactivated derivatives, IS30 family
DMIJIMIF_00161 4e-30
DMIJIMIF_00163 2.1e-23 O Preprotein translocase subunit SecB
DMIJIMIF_00165 1.3e-232 L COG3547 Transposase and inactivated derivatives
DMIJIMIF_00168 2.5e-34 S Bacteriophage abortive infection AbiH
DMIJIMIF_00172 1.3e-08 S Protein of unknown function (DUF3232)
DMIJIMIF_00173 1.3e-232 L COG3547 Transposase and inactivated derivatives
DMIJIMIF_00174 9.8e-46
DMIJIMIF_00175 1.5e-61 S Bacterial toxin of type II toxin-antitoxin system, YafQ
DMIJIMIF_00176 4.5e-274 S Archaea bacterial proteins of unknown function
DMIJIMIF_00177 2.3e-08
DMIJIMIF_00178 3.6e-90 ntd 2.4.2.6 F Nucleoside
DMIJIMIF_00179 7e-89 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DMIJIMIF_00180 1.7e-148 ptp3 3.1.3.48 T Tyrosine phosphatase family
DMIJIMIF_00181 1.2e-83 uspA T universal stress protein
DMIJIMIF_00182 1.2e-150 phnD P Phosphonate ABC transporter
DMIJIMIF_00183 4.1e-136 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DMIJIMIF_00184 8.8e-118 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
DMIJIMIF_00185 2.2e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
DMIJIMIF_00186 2.1e-105 tag 3.2.2.20 L glycosylase
DMIJIMIF_00187 1.5e-83
DMIJIMIF_00188 3.8e-273 S Calcineurin-like phosphoesterase
DMIJIMIF_00189 0.0 asnB 6.3.5.4 E Asparagine synthase
DMIJIMIF_00190 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
DMIJIMIF_00191 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
DMIJIMIF_00192 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DMIJIMIF_00193 2.1e-103 S Iron-sulfur cluster assembly protein
DMIJIMIF_00194 1.5e-230 XK27_04775 S PAS domain
DMIJIMIF_00195 1.6e-211 yttB EGP Major facilitator Superfamily
DMIJIMIF_00196 0.0 pepO 3.4.24.71 O Peptidase family M13
DMIJIMIF_00197 0.0 kup P Transport of potassium into the cell
DMIJIMIF_00198 8.6e-75
DMIJIMIF_00199 2.1e-45 S PFAM Archaeal ATPase
DMIJIMIF_00200 2.3e-10 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DMIJIMIF_00201 3.3e-59 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DMIJIMIF_00202 4.5e-45
DMIJIMIF_00204 1.9e-27
DMIJIMIF_00205 1.1e-40 S Protein of unknown function (DUF2922)
DMIJIMIF_00206 2.7e-189 S SLAP domain
DMIJIMIF_00207 3e-56 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DMIJIMIF_00208 1.5e-25
DMIJIMIF_00209 1.2e-85 K DNA-templated transcription, initiation
DMIJIMIF_00211 7.8e-73
DMIJIMIF_00212 1.1e-190 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
DMIJIMIF_00213 7.1e-131 S SLAP domain
DMIJIMIF_00214 2.5e-80 L transposase, IS605 OrfB family
DMIJIMIF_00217 3.2e-74 K Copper transport repressor CopY TcrY
DMIJIMIF_00218 0.0 copB 3.6.3.4 P P-type ATPase
DMIJIMIF_00220 2.8e-42 L Type III restriction enzyme, res subunit
DMIJIMIF_00222 5e-100 cadD P Cadmium resistance transporter
DMIJIMIF_00223 2.4e-43 L transposase activity
DMIJIMIF_00224 1.7e-213 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DMIJIMIF_00225 8.7e-209 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
DMIJIMIF_00226 0.0 yjbQ P TrkA C-terminal domain protein
DMIJIMIF_00227 5.7e-115 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DMIJIMIF_00228 2.2e-179 S Oxidoreductase family, NAD-binding Rossmann fold
DMIJIMIF_00229 9.5e-144
DMIJIMIF_00230 2.3e-136
DMIJIMIF_00231 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DMIJIMIF_00232 1.3e-99 G Aldose 1-epimerase
DMIJIMIF_00233 2.1e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DMIJIMIF_00234 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DMIJIMIF_00235 0.0 XK27_08315 M Sulfatase
DMIJIMIF_00236 1.6e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DMIJIMIF_00237 1.2e-53
DMIJIMIF_00239 1.6e-257 pepC 3.4.22.40 E aminopeptidase
DMIJIMIF_00240 2.6e-123 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
DMIJIMIF_00241 5e-301 oppA E ABC transporter, substratebinding protein
DMIJIMIF_00242 1.7e-309 oppA E ABC transporter, substratebinding protein
DMIJIMIF_00243 4.8e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DMIJIMIF_00244 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
DMIJIMIF_00245 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
DMIJIMIF_00246 4.2e-200 oppD P Belongs to the ABC transporter superfamily
DMIJIMIF_00247 1.9e-175 oppF P Belongs to the ABC transporter superfamily
DMIJIMIF_00248 1.4e-256 pepC 3.4.22.40 E aminopeptidase
DMIJIMIF_00249 2.9e-67 hsp O Belongs to the small heat shock protein (HSP20) family
DMIJIMIF_00250 2.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DMIJIMIF_00251 1.2e-112
DMIJIMIF_00253 7.8e-111 E Belongs to the SOS response-associated peptidase family
DMIJIMIF_00254 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
DMIJIMIF_00255 1.4e-89 comEB 3.5.4.12 F MafB19-like deaminase
DMIJIMIF_00256 1e-102 S TPM domain
DMIJIMIF_00257 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
DMIJIMIF_00259 1.3e-112 V ABC-type multidrug transport system, ATPase and permease components
DMIJIMIF_00260 8.4e-134 KLT Protein kinase domain
DMIJIMIF_00261 2.4e-159 V ABC-type multidrug transport system, ATPase and permease components
DMIJIMIF_00262 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DMIJIMIF_00263 3e-147 tatD L hydrolase, TatD family
DMIJIMIF_00264 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DMIJIMIF_00265 2.5e-161 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DMIJIMIF_00266 1.2e-39 veg S Biofilm formation stimulator VEG
DMIJIMIF_00267 2.9e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
DMIJIMIF_00268 8.9e-174 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DMIJIMIF_00269 5.3e-80
DMIJIMIF_00270 0.0 S SLAP domain
DMIJIMIF_00271 6e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DMIJIMIF_00272 9.7e-169 2.7.1.2 GK ROK family
DMIJIMIF_00273 6.5e-44
DMIJIMIF_00274 5.5e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
DMIJIMIF_00275 1.1e-68 S Domain of unknown function (DUF1934)
DMIJIMIF_00276 4e-48 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
DMIJIMIF_00277 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DMIJIMIF_00278 9.6e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DMIJIMIF_00279 2.7e-75 K acetyltransferase
DMIJIMIF_00280 1.9e-280 pipD E Dipeptidase
DMIJIMIF_00281 1.7e-153 msmR K AraC-like ligand binding domain
DMIJIMIF_00282 1.6e-225 pbuX F xanthine permease
DMIJIMIF_00283 4.5e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DMIJIMIF_00285 1.3e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
DMIJIMIF_00286 0.0 3.2.1.18 GH33 M Rib/alpha-like repeat
DMIJIMIF_00289 7.9e-57 ps115 K Helix-turn-helix XRE-family like proteins
DMIJIMIF_00290 1.2e-19 yjdF S Protein of unknown function (DUF2992)
DMIJIMIF_00291 2.3e-59 hxlR K Transcriptional regulator, HxlR family
DMIJIMIF_00292 2.6e-81 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
DMIJIMIF_00293 4.9e-116 L Resolvase, N-terminal
DMIJIMIF_00294 3.8e-251 L Putative transposase DNA-binding domain
DMIJIMIF_00295 2.8e-106 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
DMIJIMIF_00296 2.3e-95 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DMIJIMIF_00297 4e-95
DMIJIMIF_00298 1.5e-145 yfeO P Voltage gated chloride channel
DMIJIMIF_00299 3.3e-186 5.3.3.2 C FMN-dependent dehydrogenase
DMIJIMIF_00300 2.8e-52
DMIJIMIF_00301 2.1e-42
DMIJIMIF_00302 7.5e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DMIJIMIF_00303 7.8e-299 ybeC E amino acid
DMIJIMIF_00304 6.9e-158 S Sucrose-6F-phosphate phosphohydrolase
DMIJIMIF_00305 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
DMIJIMIF_00306 2.5e-39 rpmE2 J Ribosomal protein L31
DMIJIMIF_00307 5e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DMIJIMIF_00308 2.4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
DMIJIMIF_00309 3.5e-233 L Transposase
DMIJIMIF_00310 7.4e-169 yjjC V ABC transporter
DMIJIMIF_00311 2.5e-292 M Exporter of polyketide antibiotics
DMIJIMIF_00312 3.3e-115 K Transcriptional regulator
DMIJIMIF_00313 3.5e-233 L Transposase
DMIJIMIF_00314 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DMIJIMIF_00315 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DMIJIMIF_00316 3.4e-129 S (CBS) domain
DMIJIMIF_00317 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DMIJIMIF_00318 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DMIJIMIF_00319 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DMIJIMIF_00320 1.6e-33 yabO J S4 domain protein
DMIJIMIF_00321 6.8e-60 divIC D Septum formation initiator
DMIJIMIF_00322 6.3e-63 yabR J S1 RNA binding domain
DMIJIMIF_00323 4.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DMIJIMIF_00324 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DMIJIMIF_00325 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DMIJIMIF_00326 2.3e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DMIJIMIF_00327 1.4e-284 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
DMIJIMIF_00329 1.6e-08
DMIJIMIF_00330 1.6e-08
DMIJIMIF_00331 1.6e-08
DMIJIMIF_00333 1.1e-80 yebR 1.8.4.14 T GAF domain-containing protein
DMIJIMIF_00334 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DMIJIMIF_00335 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DMIJIMIF_00336 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DMIJIMIF_00337 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
DMIJIMIF_00338 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DMIJIMIF_00339 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DMIJIMIF_00340 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DMIJIMIF_00341 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
DMIJIMIF_00342 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DMIJIMIF_00343 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
DMIJIMIF_00344 5.3e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DMIJIMIF_00345 4.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DMIJIMIF_00346 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DMIJIMIF_00347 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DMIJIMIF_00348 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DMIJIMIF_00349 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DMIJIMIF_00350 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
DMIJIMIF_00351 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DMIJIMIF_00352 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DMIJIMIF_00353 5.8e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DMIJIMIF_00354 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DMIJIMIF_00355 6.8e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DMIJIMIF_00356 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DMIJIMIF_00357 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DMIJIMIF_00358 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DMIJIMIF_00359 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DMIJIMIF_00360 2.3e-24 rpmD J Ribosomal protein L30
DMIJIMIF_00361 2.6e-71 rplO J Binds to the 23S rRNA
DMIJIMIF_00362 1.4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DMIJIMIF_00363 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DMIJIMIF_00364 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DMIJIMIF_00365 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
DMIJIMIF_00366 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DMIJIMIF_00367 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DMIJIMIF_00368 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DMIJIMIF_00369 1.4e-60 rplQ J Ribosomal protein L17
DMIJIMIF_00370 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DMIJIMIF_00371 5.4e-158 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DMIJIMIF_00372 2.6e-138 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DMIJIMIF_00373 7.8e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DMIJIMIF_00374 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DMIJIMIF_00375 7.9e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
DMIJIMIF_00376 1.2e-41 V Type II restriction enzyme, methylase subunits
DMIJIMIF_00377 0.0 V Type II restriction enzyme, methylase subunits
DMIJIMIF_00380 2e-155 M Belongs to the glycosyl hydrolase 28 family
DMIJIMIF_00381 1.6e-58 K Acetyltransferase (GNAT) domain
DMIJIMIF_00382 3.3e-106 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
DMIJIMIF_00383 1.6e-117 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DMIJIMIF_00384 6.4e-134 S membrane transporter protein
DMIJIMIF_00385 5.8e-126 gpmB G Belongs to the phosphoglycerate mutase family
DMIJIMIF_00386 5.1e-162 czcD P cation diffusion facilitator family transporter
DMIJIMIF_00387 1.4e-23
DMIJIMIF_00388 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DMIJIMIF_00389 1.1e-183 S AAA domain
DMIJIMIF_00390 3.3e-44
DMIJIMIF_00391 7.9e-268 pepC 3.4.22.40 E Peptidase C1-like family
DMIJIMIF_00392 6.4e-53
DMIJIMIF_00393 1.5e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
DMIJIMIF_00394 1.7e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DMIJIMIF_00395 1.6e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DMIJIMIF_00396 2e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
DMIJIMIF_00397 2.3e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DMIJIMIF_00398 5e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DMIJIMIF_00399 5.5e-95 sigH K Belongs to the sigma-70 factor family
DMIJIMIF_00400 1.7e-34
DMIJIMIF_00401 1.5e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
DMIJIMIF_00402 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DMIJIMIF_00403 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DMIJIMIF_00404 1.1e-101 nusG K Participates in transcription elongation, termination and antitermination
DMIJIMIF_00405 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DMIJIMIF_00406 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DMIJIMIF_00407 7.3e-158 pstS P Phosphate
DMIJIMIF_00408 3.9e-163 pstC P probably responsible for the translocation of the substrate across the membrane
DMIJIMIF_00409 1.2e-155 pstA P Phosphate transport system permease protein PstA
DMIJIMIF_00410 1.4e-144 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DMIJIMIF_00411 7.8e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DMIJIMIF_00412 7.5e-118 phoU P Plays a role in the regulation of phosphate uptake
DMIJIMIF_00413 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DMIJIMIF_00414 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DMIJIMIF_00415 6e-141 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
DMIJIMIF_00416 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
DMIJIMIF_00417 9e-26
DMIJIMIF_00418 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DMIJIMIF_00419 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DMIJIMIF_00420 9.4e-43 2.4.1.58 GT8 M family 8
DMIJIMIF_00421 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
DMIJIMIF_00422 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DMIJIMIF_00423 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DMIJIMIF_00424 1.1e-34 S Protein of unknown function (DUF2508)
DMIJIMIF_00425 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DMIJIMIF_00426 8.9e-53 yaaQ S Cyclic-di-AMP receptor
DMIJIMIF_00427 3e-156 holB 2.7.7.7 L DNA polymerase III
DMIJIMIF_00428 1.8e-59 yabA L Involved in initiation control of chromosome replication
DMIJIMIF_00429 3e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DMIJIMIF_00430 1.7e-136 fat 3.1.2.21 I Acyl-ACP thioesterase
DMIJIMIF_00431 2.4e-87 S ECF transporter, substrate-specific component
DMIJIMIF_00432 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
DMIJIMIF_00433 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
DMIJIMIF_00434 1.8e-195 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DMIJIMIF_00435 1.3e-232 L COG3547 Transposase and inactivated derivatives
DMIJIMIF_00436 2.2e-111 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DMIJIMIF_00437 3.8e-163 S Oxidoreductase family, NAD-binding Rossmann fold
DMIJIMIF_00438 2e-113 K UTRA
DMIJIMIF_00440 9.4e-112 dnaX 2.4.99.16, 2.7.7.7 GH13 M domain protein
DMIJIMIF_00441 2e-95 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DMIJIMIF_00442 1.1e-162 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DMIJIMIF_00443 3.6e-220 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
DMIJIMIF_00444 0.0 uup S ABC transporter, ATP-binding protein
DMIJIMIF_00445 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DMIJIMIF_00446 1e-184 scrR K helix_turn _helix lactose operon repressor
DMIJIMIF_00447 2.4e-294 scrB 3.2.1.26 GH32 G invertase
DMIJIMIF_00448 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
DMIJIMIF_00449 2.3e-181 M CHAP domain
DMIJIMIF_00450 6e-75
DMIJIMIF_00451 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DMIJIMIF_00452 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DMIJIMIF_00453 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DMIJIMIF_00454 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DMIJIMIF_00455 4.5e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DMIJIMIF_00456 6.7e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DMIJIMIF_00457 9.6e-41 yajC U Preprotein translocase
DMIJIMIF_00458 5.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DMIJIMIF_00459 5.9e-216 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DMIJIMIF_00460 4.7e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
DMIJIMIF_00461 4.7e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
DMIJIMIF_00462 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DMIJIMIF_00463 2e-42 yrzL S Belongs to the UPF0297 family
DMIJIMIF_00464 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DMIJIMIF_00465 1.1e-50 yrzB S Belongs to the UPF0473 family
DMIJIMIF_00466 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DMIJIMIF_00467 3.5e-54 trxA O Belongs to the thioredoxin family
DMIJIMIF_00468 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DMIJIMIF_00469 1.1e-71 yslB S Protein of unknown function (DUF2507)
DMIJIMIF_00470 1.7e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
DMIJIMIF_00471 6.9e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DMIJIMIF_00472 8.1e-146 ykuT M mechanosensitive ion channel
DMIJIMIF_00473 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DMIJIMIF_00474 1.3e-36
DMIJIMIF_00475 9.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DMIJIMIF_00476 4.9e-182 ccpA K catabolite control protein A
DMIJIMIF_00477 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
DMIJIMIF_00478 4.3e-55
DMIJIMIF_00479 5.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
DMIJIMIF_00480 1e-91 yutD S Protein of unknown function (DUF1027)
DMIJIMIF_00481 2.6e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
DMIJIMIF_00482 8.3e-100 S Protein of unknown function (DUF1461)
DMIJIMIF_00483 2.3e-116 dedA S SNARE-like domain protein
DMIJIMIF_00484 2.3e-184 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
DMIJIMIF_00487 1.2e-85 S COG NOG38524 non supervised orthologous group
DMIJIMIF_00515 1.2e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
DMIJIMIF_00516 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
DMIJIMIF_00517 4.4e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DMIJIMIF_00518 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DMIJIMIF_00519 1.7e-29 secG U Preprotein translocase
DMIJIMIF_00520 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
DMIJIMIF_00521 6.7e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DMIJIMIF_00522 1.2e-85 S COG NOG38524 non supervised orthologous group
DMIJIMIF_00525 2.6e-166 psaA P Belongs to the bacterial solute-binding protein 9 family
DMIJIMIF_00528 7.8e-219 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DMIJIMIF_00529 4.5e-261 qacA EGP Major facilitator Superfamily
DMIJIMIF_00530 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
DMIJIMIF_00531 7.8e-155 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DMIJIMIF_00532 9.8e-194 S Bacterial protein of unknown function (DUF871)
DMIJIMIF_00533 4.6e-149 ybbH_2 K rpiR family
DMIJIMIF_00534 2.3e-273 cydA 1.10.3.14 C ubiquinol oxidase
DMIJIMIF_00535 3e-179 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
DMIJIMIF_00536 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
DMIJIMIF_00537 1.9e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DMIJIMIF_00538 1.3e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
DMIJIMIF_00539 1.6e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DMIJIMIF_00540 1.2e-160 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
DMIJIMIF_00541 1.8e-231 ndh 1.6.99.3 C NADH dehydrogenase
DMIJIMIF_00542 1.9e-89 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DMIJIMIF_00544 9.8e-169 K LysR substrate binding domain
DMIJIMIF_00545 3.2e-121 3.6.1.27 I Acid phosphatase homologues
DMIJIMIF_00546 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
DMIJIMIF_00547 8e-299 ytgP S Polysaccharide biosynthesis protein
DMIJIMIF_00548 4.3e-47 pspC KT PspC domain
DMIJIMIF_00550 2.5e-239 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DMIJIMIF_00551 1.8e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DMIJIMIF_00552 1.6e-99 M ErfK YbiS YcfS YnhG
DMIJIMIF_00553 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
DMIJIMIF_00554 8.7e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
DMIJIMIF_00555 1.7e-96 3.6.1.55 L NUDIX domain
DMIJIMIF_00556 6.6e-77 menA 2.5.1.74 H UbiA prenyltransferase family
DMIJIMIF_00558 3.6e-45
DMIJIMIF_00559 1.9e-09
DMIJIMIF_00560 5.4e-126 2.7.13.3 T GHKL domain
DMIJIMIF_00561 5.4e-144 K LytTr DNA-binding domain
DMIJIMIF_00562 8.9e-32
DMIJIMIF_00563 7.9e-47
DMIJIMIF_00565 1.4e-94
DMIJIMIF_00567 5.5e-133 K Helix-turn-helix domain, rpiR family
DMIJIMIF_00568 1.1e-242 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DMIJIMIF_00569 1.3e-220 I transferase activity, transferring acyl groups other than amino-acyl groups
DMIJIMIF_00570 1.2e-160 K Transcriptional regulator, LysR family
DMIJIMIF_00571 7.3e-169 mdcH 2.3.1.39 I Acyl transferase domain
DMIJIMIF_00572 0.0 mdcA 2.3.1.187 I Malonate decarboxylase, alpha subunit, transporter
DMIJIMIF_00573 7.1e-52 mdcC C Malonate decarboxylase delta subunit (MdcD)
DMIJIMIF_00574 0.0 mdcD 4.1.1.87 I Malonate decarboxylase gamma subunit (MdcE)
DMIJIMIF_00575 3.1e-124 mdcG 2.7.7.66 H Phosphoribosyl-dephospho-CoA transferase MdcG
DMIJIMIF_00576 1.5e-154 yisY 1.11.1.10 S Alpha/beta hydrolase family
DMIJIMIF_00577 3.4e-149 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
DMIJIMIF_00578 1.3e-54
DMIJIMIF_00579 5.7e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DMIJIMIF_00580 2.1e-252 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DMIJIMIF_00581 3.1e-141 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
DMIJIMIF_00582 7.9e-111 G Phosphoglycerate mutase family
DMIJIMIF_00583 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
DMIJIMIF_00584 5.5e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DMIJIMIF_00585 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
DMIJIMIF_00586 4.7e-55 yheA S Belongs to the UPF0342 family
DMIJIMIF_00587 1.9e-233 yhaO L Ser Thr phosphatase family protein
DMIJIMIF_00588 0.0 L AAA domain
DMIJIMIF_00589 5.8e-188 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
DMIJIMIF_00590 1.1e-36
DMIJIMIF_00591 5.5e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
DMIJIMIF_00592 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DMIJIMIF_00593 3.9e-25
DMIJIMIF_00594 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
DMIJIMIF_00595 1.7e-134 ecsA V ABC transporter, ATP-binding protein
DMIJIMIF_00596 5e-221 ecsB U ABC transporter
DMIJIMIF_00597 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DMIJIMIF_00598 1.3e-13 S Protein of unknown function (DUF805)
DMIJIMIF_00599 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
DMIJIMIF_00600 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DMIJIMIF_00601 5.2e-248 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
DMIJIMIF_00602 5.9e-129 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
DMIJIMIF_00603 2.4e-184 mntH P H( )-stimulated, divalent metal cation uptake system
DMIJIMIF_00604 8.3e-41 M Peptidase family M1 domain
DMIJIMIF_00605 5.8e-163 M Peptidase family M1 domain
DMIJIMIF_00606 7.8e-51 S Alpha beta hydrolase
DMIJIMIF_00608 2.9e-187 S Bacteriocin helveticin-J
DMIJIMIF_00609 3.1e-50 L RelB antitoxin
DMIJIMIF_00610 6.1e-136 qmcA O prohibitin homologues
DMIJIMIF_00611 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DMIJIMIF_00612 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
DMIJIMIF_00613 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DMIJIMIF_00614 6e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DMIJIMIF_00615 2.3e-251 dnaB L Replication initiation and membrane attachment
DMIJIMIF_00616 3.6e-168 dnaI L Primosomal protein DnaI
DMIJIMIF_00617 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DMIJIMIF_00618 5.9e-174 V Abi-like protein
DMIJIMIF_00619 3.5e-91
DMIJIMIF_00620 7.8e-76 K LytTr DNA-binding domain
DMIJIMIF_00621 3.8e-75 S Protein of unknown function (DUF3021)
DMIJIMIF_00622 1.3e-165 V ABC transporter
DMIJIMIF_00623 7.9e-116 S domain protein
DMIJIMIF_00624 6.4e-80 yyaR K Acetyltransferase (GNAT) domain
DMIJIMIF_00625 2.2e-73 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DMIJIMIF_00626 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
DMIJIMIF_00627 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DMIJIMIF_00628 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DMIJIMIF_00629 9.2e-201 tnpB L Putative transposase DNA-binding domain
DMIJIMIF_00630 4.2e-84 yqeG S HAD phosphatase, family IIIA
DMIJIMIF_00631 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
DMIJIMIF_00632 1.2e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DMIJIMIF_00633 6.6e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
DMIJIMIF_00634 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DMIJIMIF_00635 1.2e-216 ylbM S Belongs to the UPF0348 family
DMIJIMIF_00636 5.5e-98 yceD S Uncharacterized ACR, COG1399
DMIJIMIF_00637 1.2e-126 K response regulator
DMIJIMIF_00638 1.3e-277 arlS 2.7.13.3 T Histidine kinase
DMIJIMIF_00639 1.2e-49 S CAAX protease self-immunity
DMIJIMIF_00640 1e-223 S SLAP domain
DMIJIMIF_00641 1.2e-85 S Aminoacyl-tRNA editing domain
DMIJIMIF_00642 7.6e-164 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DMIJIMIF_00643 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
DMIJIMIF_00644 1.9e-138 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DMIJIMIF_00645 3.6e-63 yodB K Transcriptional regulator, HxlR family
DMIJIMIF_00647 1.5e-110 papP P ABC transporter, permease protein
DMIJIMIF_00648 2.8e-117 P ABC transporter permease
DMIJIMIF_00649 9.7e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DMIJIMIF_00650 2.9e-162 cjaA ET ABC transporter substrate-binding protein
DMIJIMIF_00651 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DMIJIMIF_00652 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DMIJIMIF_00653 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DMIJIMIF_00654 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
DMIJIMIF_00655 1e-156 metQ1 P Belongs to the nlpA lipoprotein family
DMIJIMIF_00656 1.3e-24
DMIJIMIF_00657 0.0 mco Q Multicopper oxidase
DMIJIMIF_00658 1.6e-146 S Sucrose-6F-phosphate phosphohydrolase
DMIJIMIF_00659 0.0 oppA E ABC transporter
DMIJIMIF_00660 7.3e-233 Q Imidazolonepropionase and related amidohydrolases
DMIJIMIF_00661 2.2e-219 3.5.1.47 S Peptidase dimerisation domain
DMIJIMIF_00662 3.5e-138 S Protein of unknown function (DUF3100)
DMIJIMIF_00663 4.4e-83 S An automated process has identified a potential problem with this gene model
DMIJIMIF_00664 2.9e-50 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DMIJIMIF_00665 1.2e-111 S SLAP domain
DMIJIMIF_00666 2.4e-88
DMIJIMIF_00667 3e-09 isdH M Iron Transport-associated domain
DMIJIMIF_00668 6.3e-123 M Iron Transport-associated domain
DMIJIMIF_00669 1.5e-158 isdE P Periplasmic binding protein
DMIJIMIF_00670 5.6e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DMIJIMIF_00671 7.5e-138 fhuC 3.6.3.34 HP abc transporter atp-binding protein
DMIJIMIF_00672 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DMIJIMIF_00673 1.2e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
DMIJIMIF_00674 1.3e-38 S RelB antitoxin
DMIJIMIF_00675 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
DMIJIMIF_00676 0.0 S membrane
DMIJIMIF_00677 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
DMIJIMIF_00678 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
DMIJIMIF_00679 2.1e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DMIJIMIF_00680 3.1e-119 gluP 3.4.21.105 S Rhomboid family
DMIJIMIF_00681 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
DMIJIMIF_00682 1.5e-65 yqhL P Rhodanese-like protein
DMIJIMIF_00683 9.2e-170 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DMIJIMIF_00684 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
DMIJIMIF_00685 5.8e-263 glnA 6.3.1.2 E glutamine synthetase
DMIJIMIF_00686 8.7e-170
DMIJIMIF_00687 3.1e-144
DMIJIMIF_00688 5e-248 L Transposase
DMIJIMIF_00689 1.4e-62
DMIJIMIF_00690 4.5e-260 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
DMIJIMIF_00691 0.0 O Belongs to the peptidase S8 family
DMIJIMIF_00692 2.9e-174 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
DMIJIMIF_00693 1.9e-93 dhaL 2.7.1.121 S Dak2
DMIJIMIF_00694 1.3e-55 dhaM 2.7.1.121 S PTS system fructose IIA component
DMIJIMIF_00695 1.2e-121 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
DMIJIMIF_00696 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DMIJIMIF_00697 9e-186 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
DMIJIMIF_00698 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
DMIJIMIF_00699 2.5e-186 lacR K Transcriptional regulator
DMIJIMIF_00700 0.0 lacS G Transporter
DMIJIMIF_00701 0.0 lacZ 3.2.1.23 G -beta-galactosidase
DMIJIMIF_00702 2.1e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DMIJIMIF_00703 1.3e-287 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
DMIJIMIF_00704 2.9e-195 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
DMIJIMIF_00705 5.5e-36
DMIJIMIF_00706 2.3e-173 scrR K Periplasmic binding protein domain
DMIJIMIF_00707 2.7e-238 msmE G Bacterial extracellular solute-binding protein
DMIJIMIF_00708 4.8e-157 msmF P Binding-protein-dependent transport system inner membrane component
DMIJIMIF_00709 5.2e-153 msmG P Binding-protein-dependent transport system inner membrane component
DMIJIMIF_00710 8e-210 msmX P Belongs to the ABC transporter superfamily
DMIJIMIF_00711 0.0 rafA 3.2.1.22 G alpha-galactosidase
DMIJIMIF_00712 2.7e-282 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
DMIJIMIF_00713 2.8e-111 2.7.6.5 T Region found in RelA / SpoT proteins
DMIJIMIF_00714 1.4e-105 K response regulator
DMIJIMIF_00715 1.4e-221 sptS 2.7.13.3 T Histidine kinase
DMIJIMIF_00716 3.2e-209 EGP Major facilitator Superfamily
DMIJIMIF_00717 5e-69 O OsmC-like protein
DMIJIMIF_00718 2.6e-94 S Protein of unknown function (DUF805)
DMIJIMIF_00719 2.2e-78
DMIJIMIF_00720 1.1e-283
DMIJIMIF_00721 1.2e-137 S Fic/DOC family
DMIJIMIF_00722 6.6e-304 S SLAP domain
DMIJIMIF_00723 1.9e-275 yjeM E Amino Acid
DMIJIMIF_00724 6.8e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DMIJIMIF_00725 4.4e-244 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
DMIJIMIF_00727 2.3e-113 L Resolvase, N-terminal
DMIJIMIF_00728 2.4e-258 L Putative transposase DNA-binding domain
DMIJIMIF_00729 6.5e-49 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
DMIJIMIF_00730 4.6e-120 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
DMIJIMIF_00731 3.3e-52 S Iron-sulfur cluster assembly protein
DMIJIMIF_00732 1.7e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
DMIJIMIF_00733 9e-124 sdaAB 4.3.1.17 E Serine dehydratase beta chain
DMIJIMIF_00734 6.9e-44
DMIJIMIF_00735 1.2e-285 lsa S ABC transporter
DMIJIMIF_00736 1.3e-73 clcA P chloride
DMIJIMIF_00737 1.1e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DMIJIMIF_00738 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
DMIJIMIF_00739 6.3e-168 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DMIJIMIF_00740 4.6e-94 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DMIJIMIF_00741 1.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
DMIJIMIF_00742 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DMIJIMIF_00743 4.2e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
DMIJIMIF_00744 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
DMIJIMIF_00745 5.4e-09 higA K Helix-turn-helix XRE-family like proteins
DMIJIMIF_00746 9.5e-142 glcU U sugar transport
DMIJIMIF_00747 8.4e-47
DMIJIMIF_00748 2.2e-78 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
DMIJIMIF_00749 2e-11 S SLAP domain
DMIJIMIF_00751 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
DMIJIMIF_00752 1.2e-42 S Alpha beta hydrolase
DMIJIMIF_00753 1.9e-37
DMIJIMIF_00754 2.6e-52
DMIJIMIF_00755 4.6e-154 S haloacid dehalogenase-like hydrolase
DMIJIMIF_00756 2.7e-291 V ABC-type multidrug transport system, ATPase and permease components
DMIJIMIF_00757 3.4e-278 V ABC-type multidrug transport system, ATPase and permease components
DMIJIMIF_00758 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
DMIJIMIF_00759 2.9e-178 I Carboxylesterase family
DMIJIMIF_00761 8.4e-208 M Glycosyl hydrolases family 25
DMIJIMIF_00762 2.1e-160 cinI S Serine hydrolase (FSH1)
DMIJIMIF_00763 1e-299 S Predicted membrane protein (DUF2207)
DMIJIMIF_00764 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
DMIJIMIF_00766 1.9e-256 S Uncharacterized protein conserved in bacteria (DUF2325)
DMIJIMIF_00767 1.4e-150 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
DMIJIMIF_00768 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
DMIJIMIF_00769 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
DMIJIMIF_00770 3e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DMIJIMIF_00771 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DMIJIMIF_00772 3.4e-71 yqhY S Asp23 family, cell envelope-related function
DMIJIMIF_00773 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DMIJIMIF_00774 1.4e-150 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DMIJIMIF_00775 2.9e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DMIJIMIF_00776 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DMIJIMIF_00777 7e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DMIJIMIF_00778 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
DMIJIMIF_00779 3.9e-301 recN L May be involved in recombinational repair of damaged DNA
DMIJIMIF_00780 1.1e-77 6.3.3.2 S ASCH
DMIJIMIF_00781 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
DMIJIMIF_00782 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DMIJIMIF_00783 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DMIJIMIF_00784 1.9e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DMIJIMIF_00785 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DMIJIMIF_00786 1.3e-139 stp 3.1.3.16 T phosphatase
DMIJIMIF_00787 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
DMIJIMIF_00788 3.3e-166 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
DMIJIMIF_00789 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
DMIJIMIF_00790 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
DMIJIMIF_00791 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
DMIJIMIF_00792 4e-57 asp S Asp23 family, cell envelope-related function
DMIJIMIF_00793 2e-305 yloV S DAK2 domain fusion protein YloV
DMIJIMIF_00794 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DMIJIMIF_00795 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
DMIJIMIF_00796 4.4e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DMIJIMIF_00797 1.1e-192 oppD P Belongs to the ABC transporter superfamily
DMIJIMIF_00798 1.5e-170 oppF P Belongs to the ABC transporter superfamily
DMIJIMIF_00799 5.7e-172 oppB P ABC transporter permease
DMIJIMIF_00800 1.8e-130 oppC P Binding-protein-dependent transport system inner membrane component
DMIJIMIF_00801 0.0 oppA E ABC transporter substrate-binding protein
DMIJIMIF_00802 8.3e-310 oppA E ABC transporter substrate-binding protein
DMIJIMIF_00803 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DMIJIMIF_00804 0.0 smc D Required for chromosome condensation and partitioning
DMIJIMIF_00805 2.5e-162 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DMIJIMIF_00806 3.8e-289 pipD E Dipeptidase
DMIJIMIF_00807 2.1e-07
DMIJIMIF_00808 2.4e-133 cysA V ABC transporter, ATP-binding protein
DMIJIMIF_00809 0.0 V FtsX-like permease family
DMIJIMIF_00810 2.2e-260 yfnA E amino acid
DMIJIMIF_00811 4.6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DMIJIMIF_00812 5.8e-229 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DMIJIMIF_00813 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
DMIJIMIF_00814 2.2e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DMIJIMIF_00815 5e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
DMIJIMIF_00816 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DMIJIMIF_00817 3.8e-215 S SLAP domain
DMIJIMIF_00818 4.9e-122 ung2 3.2.2.27 L Uracil-DNA glycosylase
DMIJIMIF_00819 3.7e-145 E GDSL-like Lipase/Acylhydrolase family
DMIJIMIF_00820 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DMIJIMIF_00821 3e-38 ynzC S UPF0291 protein
DMIJIMIF_00822 4.2e-30 yneF S Uncharacterised protein family (UPF0154)
DMIJIMIF_00823 0.0 mdlA V ABC transporter
DMIJIMIF_00824 0.0 mdlB V ABC transporter
DMIJIMIF_00825 0.0 pepO 3.4.24.71 O Peptidase family M13
DMIJIMIF_00826 3.1e-22 npr 1.11.1.1 C NADH oxidase
DMIJIMIF_00827 4.4e-85 dps P Belongs to the Dps family
DMIJIMIF_00828 4.5e-311 oppA E ABC transporter substrate-binding protein
DMIJIMIF_00829 1.3e-132 S SLAP domain
DMIJIMIF_00830 1.2e-98 L An automated process has identified a potential problem with this gene model
DMIJIMIF_00831 7e-19 3.1.3.48 D FIVAR domain
DMIJIMIF_00832 2.6e-22
DMIJIMIF_00833 1.6e-63 L PFAM IS66 Orf2 family protein
DMIJIMIF_00834 8.7e-34 S Transposase C of IS166 homeodomain
DMIJIMIF_00835 7.5e-247 L Transposase IS66 family
DMIJIMIF_00836 1.2e-286 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
DMIJIMIF_00837 2e-227 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
DMIJIMIF_00838 1.9e-112 plsC 2.3.1.51 I Acyltransferase
DMIJIMIF_00839 1.2e-191 yabB 2.1.1.223 L Methyltransferase small domain
DMIJIMIF_00840 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
DMIJIMIF_00841 8.3e-185 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DMIJIMIF_00842 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
DMIJIMIF_00843 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DMIJIMIF_00844 1.6e-137 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DMIJIMIF_00845 9.6e-136 cdsA 2.7.7.41 I Belongs to the CDS family
DMIJIMIF_00846 7.5e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
DMIJIMIF_00847 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DMIJIMIF_00848 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DMIJIMIF_00849 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
DMIJIMIF_00850 1.3e-197 nusA K Participates in both transcription termination and antitermination
DMIJIMIF_00851 8.8e-47 ylxR K Protein of unknown function (DUF448)
DMIJIMIF_00852 3.2e-47 rplGA J ribosomal protein
DMIJIMIF_00853 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DMIJIMIF_00854 3e-60 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DMIJIMIF_00855 3.4e-158 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DMIJIMIF_00856 7.1e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
DMIJIMIF_00857 4.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DMIJIMIF_00858 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DMIJIMIF_00859 0.0 dnaK O Heat shock 70 kDa protein
DMIJIMIF_00860 1.9e-201 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DMIJIMIF_00861 9.3e-80 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
DMIJIMIF_00862 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DMIJIMIF_00863 8.1e-112 srtA 3.4.22.70 M sortase family
DMIJIMIF_00864 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
DMIJIMIF_00865 9.7e-97 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DMIJIMIF_00866 8.1e-201 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
DMIJIMIF_00867 3.2e-211 S Bacterial protein of unknown function (DUF871)
DMIJIMIF_00869 1.6e-39 ybhL S Belongs to the BI1 family
DMIJIMIF_00870 1.3e-24 S Metal binding domain of Ada
DMIJIMIF_00871 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
DMIJIMIF_00872 6.9e-137 lysR5 K LysR substrate binding domain
DMIJIMIF_00873 1.4e-147 arcA 3.5.3.6 E Arginine
DMIJIMIF_00874 8.3e-47 arcA 3.5.3.6 E Arginine
DMIJIMIF_00875 3.9e-108 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DMIJIMIF_00876 2.2e-108 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
DMIJIMIF_00877 2e-97 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
DMIJIMIF_00878 5.6e-222 S Sterol carrier protein domain
DMIJIMIF_00879 1e-20
DMIJIMIF_00880 2e-109 K LysR substrate binding domain
DMIJIMIF_00881 9e-98
DMIJIMIF_00882 1.9e-118 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
DMIJIMIF_00883 2.1e-95
DMIJIMIF_00884 3.1e-287 V ABC-type multidrug transport system, ATPase and permease components
DMIJIMIF_00885 8.6e-282 V ABC-type multidrug transport system, ATPase and permease components
DMIJIMIF_00886 2.1e-73 hipB K sequence-specific DNA binding
DMIJIMIF_00887 1.1e-41 S SnoaL-like domain
DMIJIMIF_00888 0.0 L PLD-like domain
DMIJIMIF_00889 2.6e-100 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
DMIJIMIF_00890 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
DMIJIMIF_00891 8.1e-282 thrC 4.2.3.1 E Threonine synthase
DMIJIMIF_00892 5e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
DMIJIMIF_00893 1.9e-158 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DMIJIMIF_00894 7.2e-118
DMIJIMIF_00895 4.9e-162 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
DMIJIMIF_00897 3.5e-108 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DMIJIMIF_00898 4.5e-117 S Peptidase family M23
DMIJIMIF_00899 1e-120 polA_2 2.7.7.7 L DNA polymerase
DMIJIMIF_00900 1e-96 S Protein of unknown function (DUF2815)
DMIJIMIF_00901 1.3e-202 L Protein of unknown function (DUF2800)
DMIJIMIF_00902 4.8e-25
DMIJIMIF_00903 4.4e-21
DMIJIMIF_00905 8.8e-152
DMIJIMIF_00906 7.5e-25
DMIJIMIF_00907 1.1e-223
DMIJIMIF_00908 1.8e-37 K Cro/C1-type HTH DNA-binding domain
DMIJIMIF_00909 2.5e-243 mod 2.1.1.72, 3.1.21.5 L DNA methylase
DMIJIMIF_00910 0.0 res 2.1.1.72, 3.1.21.5 L Type III restriction enzyme, res subunit
DMIJIMIF_00911 3e-216 K DNA binding
DMIJIMIF_00912 0.0 L helicase activity
DMIJIMIF_00913 1e-160 S Bacteriophage abortive infection AbiH
DMIJIMIF_00914 8.7e-104
DMIJIMIF_00915 6.7e-223 L Transposase
DMIJIMIF_00916 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
DMIJIMIF_00917 3.9e-34 copZ C Heavy-metal-associated domain
DMIJIMIF_00918 2.4e-30 dps P Belongs to the Dps family
DMIJIMIF_00919 1.1e-40 dps P Belongs to the Dps family
DMIJIMIF_00920 1.5e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
DMIJIMIF_00922 2.4e-75 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DMIJIMIF_00923 6.7e-223 L Transposase
DMIJIMIF_00924 0.0 UW LPXTG-motif cell wall anchor domain protein
DMIJIMIF_00925 1e-64 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DMIJIMIF_00926 9.4e-34 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DMIJIMIF_00927 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
DMIJIMIF_00928 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
DMIJIMIF_00929 8.5e-129 sufC O FeS assembly ATPase SufC
DMIJIMIF_00930 6.7e-226 sufD O FeS assembly protein SufD
DMIJIMIF_00931 2.4e-231 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DMIJIMIF_00932 4.8e-73 nifU C SUF system FeS assembly protein, NifU family
DMIJIMIF_00933 1.6e-268 sufB O assembly protein SufB
DMIJIMIF_00934 2.7e-49 yitW S Iron-sulfur cluster assembly protein
DMIJIMIF_00935 1.6e-68 yqeY S YqeY-like protein
DMIJIMIF_00936 9.5e-175 phoH T phosphate starvation-inducible protein PhoH
DMIJIMIF_00937 2.9e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DMIJIMIF_00938 1.6e-163 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DMIJIMIF_00939 1.3e-232 L COG3547 Transposase and inactivated derivatives
DMIJIMIF_00940 1.5e-236 L transposase, IS605 OrfB family
DMIJIMIF_00941 1.1e-136 recO L Involved in DNA repair and RecF pathway recombination
DMIJIMIF_00942 1e-178 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
DMIJIMIF_00943 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
DMIJIMIF_00944 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DMIJIMIF_00945 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DMIJIMIF_00946 1.9e-247 L Transposase
DMIJIMIF_00947 2.6e-41 L Helix-turn-helix domain
DMIJIMIF_00948 3.1e-102 L PFAM Integrase catalytic region
DMIJIMIF_00949 6.3e-221 L Transposase
DMIJIMIF_00951 6.9e-94 S Cell surface protein
DMIJIMIF_00953 2.1e-171 L Transposase
DMIJIMIF_00954 2.3e-127 S Peptidase family M23
DMIJIMIF_00955 4.8e-81 mutT 3.6.1.55 F NUDIX domain
DMIJIMIF_00956 1.2e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
DMIJIMIF_00957 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DMIJIMIF_00958 4.4e-241 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
DMIJIMIF_00959 1.6e-61 yvoA_1 K Transcriptional regulator, GntR family
DMIJIMIF_00960 9.6e-124 skfE V ATPases associated with a variety of cellular activities
DMIJIMIF_00961 1.1e-142
DMIJIMIF_00962 1.7e-137
DMIJIMIF_00963 6.7e-145
DMIJIMIF_00964 3.8e-27
DMIJIMIF_00965 8.8e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DMIJIMIF_00966 1.8e-144
DMIJIMIF_00967 4.3e-169
DMIJIMIF_00968 1.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
DMIJIMIF_00969 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
DMIJIMIF_00970 8.2e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
DMIJIMIF_00971 7.8e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
DMIJIMIF_00972 3.7e-179 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
DMIJIMIF_00973 2.6e-134 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
DMIJIMIF_00974 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
DMIJIMIF_00975 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
DMIJIMIF_00976 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
DMIJIMIF_00977 2.4e-89 ypmB S Protein conserved in bacteria
DMIJIMIF_00978 3e-256 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
DMIJIMIF_00979 1.3e-114 dnaD L DnaD domain protein
DMIJIMIF_00980 2.7e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DMIJIMIF_00981 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
DMIJIMIF_00982 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
DMIJIMIF_00983 1e-107 ypsA S Belongs to the UPF0398 family
DMIJIMIF_00984 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
DMIJIMIF_00985 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
DMIJIMIF_00986 1e-242 cpdA S Calcineurin-like phosphoesterase
DMIJIMIF_00987 7.6e-79
DMIJIMIF_00988 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
DMIJIMIF_00989 9.4e-94 cca 2.7.7.19, 2.7.7.72 J Aminoglycoside-2''-adenylyltransferase
DMIJIMIF_00990 7e-200 L transposition, DNA-mediated
DMIJIMIF_00991 2e-33
DMIJIMIF_00992 3.6e-63
DMIJIMIF_00995 3.8e-118
DMIJIMIF_00996 1e-104 pncA Q Isochorismatase family
DMIJIMIF_00998 3.4e-35
DMIJIMIF_00999 1.2e-79 snf 2.7.11.1 KL domain protein
DMIJIMIF_01000 0.0 snf 2.7.11.1 KL domain protein
DMIJIMIF_01001 4.6e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DMIJIMIF_01002 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DMIJIMIF_01003 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DMIJIMIF_01004 2.1e-182 K Transcriptional regulator
DMIJIMIF_01005 7.3e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
DMIJIMIF_01006 1.1e-112 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DMIJIMIF_01007 4e-57 K Helix-turn-helix domain
DMIJIMIF_01008 2.7e-123 yoaK S Protein of unknown function (DUF1275)
DMIJIMIF_01009 2e-39 S Transglycosylase associated protein
DMIJIMIF_01010 2e-211 M Glycosyl hydrolases family 25
DMIJIMIF_01011 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
DMIJIMIF_01012 4.1e-67
DMIJIMIF_01013 1.2e-202 xerS L Belongs to the 'phage' integrase family
DMIJIMIF_01014 1.3e-300 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DMIJIMIF_01015 3.5e-160 degV S EDD domain protein, DegV family
DMIJIMIF_01016 1.1e-66
DMIJIMIF_01017 0.0 FbpA K Fibronectin-binding protein
DMIJIMIF_01018 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
DMIJIMIF_01019 4.6e-199 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
DMIJIMIF_01020 1.3e-168 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DMIJIMIF_01021 1.4e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DMIJIMIF_01022 2.4e-282 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
DMIJIMIF_01023 5.5e-53
DMIJIMIF_01024 2.6e-222 L Transposase
DMIJIMIF_01025 4.4e-158 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
DMIJIMIF_01026 2e-178 D nuclear chromosome segregation
DMIJIMIF_01027 7.8e-28
DMIJIMIF_01028 7.2e-32 S Helix-turn-helix domain
DMIJIMIF_01029 0.0 tetP J Elongation factor G, domain IV
DMIJIMIF_01030 9.3e-63 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
DMIJIMIF_01031 9.7e-74 S Sel1-like repeats.
DMIJIMIF_01032 1.1e-104 3.1.4.37 S AAA domain
DMIJIMIF_01033 8.6e-182
DMIJIMIF_01034 4.7e-31
DMIJIMIF_01035 3.1e-80 S HIRAN
DMIJIMIF_01036 1.9e-60
DMIJIMIF_01039 7.5e-247 L Transposase IS66 family
DMIJIMIF_01040 8.7e-34 S Transposase C of IS166 homeodomain
DMIJIMIF_01041 1.6e-63 L PFAM IS66 Orf2 family protein
DMIJIMIF_01042 2.6e-22
DMIJIMIF_01043 1.5e-285 1.3.5.4 C FMN_bind
DMIJIMIF_01044 2.3e-37 K LysR substrate binding domain
DMIJIMIF_01045 1.3e-61
DMIJIMIF_01046 2.7e-142 mrr L restriction endonuclease
DMIJIMIF_01047 7.7e-118 L restriction endonuclease
DMIJIMIF_01049 5.7e-48 S KAP family P-loop domain
DMIJIMIF_01050 1.8e-148 3.1.21.3 V Type I restriction modification DNA specificity domain
DMIJIMIF_01051 6.1e-258 hsdM 2.1.1.72 V type I restriction-modification system
DMIJIMIF_01052 6.5e-09 S CAAX amino terminal protease
DMIJIMIF_01053 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
DMIJIMIF_01054 3.7e-247 S SLAP domain
DMIJIMIF_01056 2.9e-237 XK27_01810 S Calcineurin-like phosphoesterase
DMIJIMIF_01057 1.3e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
DMIJIMIF_01058 5e-240 G Bacterial extracellular solute-binding protein
DMIJIMIF_01059 1.3e-17
DMIJIMIF_01060 6.7e-267 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
DMIJIMIF_01061 2.8e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DMIJIMIF_01062 7.3e-191 yrvN L AAA C-terminal domain
DMIJIMIF_01063 1.7e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
DMIJIMIF_01064 1.4e-83 K Acetyltransferase (GNAT) domain
DMIJIMIF_01065 3.8e-251 L Putative transposase DNA-binding domain
DMIJIMIF_01066 4.9e-116 L Resolvase, N-terminal
DMIJIMIF_01067 2.9e-229 S Putative peptidoglycan binding domain
DMIJIMIF_01068 2.2e-94 S ECF-type riboflavin transporter, S component
DMIJIMIF_01069 1.1e-99 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
DMIJIMIF_01070 1.2e-203 pbpX1 V Beta-lactamase
DMIJIMIF_01071 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
DMIJIMIF_01072 7e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DMIJIMIF_01073 9.1e-223 L Transposase
DMIJIMIF_01074 1.2e-112 3.6.1.27 I Acid phosphatase homologues
DMIJIMIF_01075 9.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
DMIJIMIF_01076 0.0 uvrA3 L excinuclease ABC, A subunit
DMIJIMIF_01077 3.4e-82 C Flavodoxin
DMIJIMIF_01078 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
DMIJIMIF_01079 3.2e-247 ynbB 4.4.1.1 P aluminum resistance
DMIJIMIF_01080 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
DMIJIMIF_01081 1.7e-284 E Amino acid permease
DMIJIMIF_01082 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
DMIJIMIF_01083 2e-274 pepV 3.5.1.18 E dipeptidase PepV
DMIJIMIF_01084 9.9e-79 mmuP E amino acid
DMIJIMIF_01085 2.9e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
DMIJIMIF_01086 9.2e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DMIJIMIF_01087 1e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DMIJIMIF_01088 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
DMIJIMIF_01089 6.8e-66 M LysM domain protein
DMIJIMIF_01090 3.7e-44 S aldo-keto reductase (NADP) activity
DMIJIMIF_01091 1.4e-74 C Aldo keto reductase
DMIJIMIF_01092 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
DMIJIMIF_01093 5e-54 L COG3547 Transposase and inactivated derivatives
DMIJIMIF_01094 5.8e-112 L COG3547 Transposase and inactivated derivatives
DMIJIMIF_01095 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
DMIJIMIF_01096 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DMIJIMIF_01097 2.2e-141 xerC D Phage integrase, N-terminal SAM-like domain
DMIJIMIF_01098 2.7e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
DMIJIMIF_01099 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DMIJIMIF_01100 1.3e-151 dprA LU DNA protecting protein DprA
DMIJIMIF_01101 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DMIJIMIF_01102 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DMIJIMIF_01103 1.5e-175 yjcE P Sodium proton antiporter
DMIJIMIF_01104 7.1e-36 yozE S Belongs to the UPF0346 family
DMIJIMIF_01105 2e-144 DegV S Uncharacterised protein, DegV family COG1307
DMIJIMIF_01106 1.2e-107 hlyIII S protein, hemolysin III
DMIJIMIF_01107 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
DMIJIMIF_01108 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
DMIJIMIF_01109 1.9e-86 3.4.21.96 S SLAP domain
DMIJIMIF_01110 1.3e-38 yagE E amino acid
DMIJIMIF_01111 6e-37 yagE E amino acid
DMIJIMIF_01112 7e-81 yagE E amino acid
DMIJIMIF_01113 6.9e-150 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
DMIJIMIF_01114 3.7e-145 2.4.2.3 F Phosphorylase superfamily
DMIJIMIF_01115 6.9e-144 2.4.2.3 F Phosphorylase superfamily
DMIJIMIF_01116 4e-38 S AAA domain
DMIJIMIF_01117 1.5e-124 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
DMIJIMIF_01118 1.4e-55 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
DMIJIMIF_01119 1.8e-92 yxaM EGP Major facilitator Superfamily
DMIJIMIF_01120 8.1e-70 yxaM EGP Major facilitator Superfamily
DMIJIMIF_01121 4.3e-112 XK27_07525 3.6.1.55 F NUDIX domain
DMIJIMIF_01122 7.1e-92 rimL J Acetyltransferase (GNAT) domain
DMIJIMIF_01123 1.2e-263
DMIJIMIF_01124 3.3e-22 glsA 3.5.1.2 E Belongs to the glutaminase family
DMIJIMIF_01125 4.3e-53 glsA 3.5.1.2 E Belongs to the glutaminase family
DMIJIMIF_01126 1.9e-35 glsA 3.5.1.2 E Belongs to the glutaminase family
DMIJIMIF_01127 3.1e-131 3.1.3.48 T Tyrosine phosphatase family
DMIJIMIF_01128 9e-22 S Protein of unknown function (DUF3923)
DMIJIMIF_01129 5.6e-56
DMIJIMIF_01130 2.9e-45 S MazG-like family
DMIJIMIF_01131 2.4e-59
DMIJIMIF_01132 1e-88 speG J Acetyltransferase (GNAT) domain
DMIJIMIF_01133 2e-26
DMIJIMIF_01134 3.5e-283 V ABC transporter transmembrane region
DMIJIMIF_01135 5.8e-288 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DMIJIMIF_01136 1e-229 S Tetratricopeptide repeat protein
DMIJIMIF_01137 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DMIJIMIF_01138 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
DMIJIMIF_01139 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
DMIJIMIF_01140 3.8e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
DMIJIMIF_01141 3e-17 M Lysin motif
DMIJIMIF_01142 1.5e-113 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DMIJIMIF_01143 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DMIJIMIF_01144 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DMIJIMIF_01145 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DMIJIMIF_01146 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DMIJIMIF_01147 1.2e-166 xerD D recombinase XerD
DMIJIMIF_01148 1.2e-168 cvfB S S1 domain
DMIJIMIF_01149 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
DMIJIMIF_01150 1.2e-182 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
DMIJIMIF_01151 0.0 dnaE 2.7.7.7 L DNA polymerase
DMIJIMIF_01152 2.3e-23 S Protein of unknown function (DUF2929)
DMIJIMIF_01153 7.3e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
DMIJIMIF_01154 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
DMIJIMIF_01155 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
DMIJIMIF_01156 1.6e-143 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
DMIJIMIF_01157 5.8e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
DMIJIMIF_01158 9.1e-294 I Acyltransferase
DMIJIMIF_01159 6.5e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DMIJIMIF_01160 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DMIJIMIF_01161 1.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
DMIJIMIF_01162 9.9e-242 yfnA E Amino Acid
DMIJIMIF_01163 2.6e-180 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DMIJIMIF_01164 5.2e-150 yxeH S hydrolase
DMIJIMIF_01165 1.4e-19 S reductase
DMIJIMIF_01166 9e-92 S reductase
DMIJIMIF_01167 5.2e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DMIJIMIF_01168 2.6e-222 patA 2.6.1.1 E Aminotransferase
DMIJIMIF_01169 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
DMIJIMIF_01170 6.8e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
DMIJIMIF_01171 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DMIJIMIF_01172 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DMIJIMIF_01173 2.9e-60
DMIJIMIF_01174 2.5e-175 prmA J Ribosomal protein L11 methyltransferase
DMIJIMIF_01175 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DMIJIMIF_01176 2.8e-249 yjjP S Putative threonine/serine exporter
DMIJIMIF_01177 2.6e-177 citR K Putative sugar-binding domain
DMIJIMIF_01178 3.8e-51
DMIJIMIF_01179 5.5e-09
DMIJIMIF_01180 2.9e-66 S Domain of unknown function DUF1828
DMIJIMIF_01181 7.4e-95 S UPF0397 protein
DMIJIMIF_01182 0.0 ykoD P ABC transporter, ATP-binding protein
DMIJIMIF_01183 3.6e-146 cbiQ P cobalt transport
DMIJIMIF_01184 1.8e-22
DMIJIMIF_01185 1e-70 yeaL S Protein of unknown function (DUF441)
DMIJIMIF_01186 4.9e-290 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
DMIJIMIF_01187 2.4e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
DMIJIMIF_01188 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
DMIJIMIF_01189 2.2e-196 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
DMIJIMIF_01190 1.1e-152 ydjP I Alpha/beta hydrolase family
DMIJIMIF_01191 3e-273 P Sodium:sulfate symporter transmembrane region
DMIJIMIF_01192 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
DMIJIMIF_01193 3.7e-254 pepC 3.4.22.40 E Peptidase C1-like family
DMIJIMIF_01194 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DMIJIMIF_01195 6.6e-262 frdC 1.3.5.4 C FAD binding domain
DMIJIMIF_01196 3.8e-265 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
DMIJIMIF_01197 2e-73 metI P ABC transporter permease
DMIJIMIF_01198 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DMIJIMIF_01199 7.7e-160 metQ2 P Belongs to the nlpA lipoprotein family
DMIJIMIF_01200 5.8e-177 F DNA/RNA non-specific endonuclease
DMIJIMIF_01201 0.0 aha1 P E1-E2 ATPase
DMIJIMIF_01202 7.7e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DMIJIMIF_01203 6.3e-179 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DMIJIMIF_01204 2.4e-251 yifK E Amino acid permease
DMIJIMIF_01205 1.7e-282 V ABC-type multidrug transport system, ATPase and permease components
DMIJIMIF_01206 8.6e-290 P ABC transporter
DMIJIMIF_01207 5.1e-37
DMIJIMIF_01209 7.5e-123 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
DMIJIMIF_01210 6.5e-87 K GNAT family
DMIJIMIF_01211 3.4e-205 XK27_00915 C Luciferase-like monooxygenase
DMIJIMIF_01212 3e-117 rbtT P Major Facilitator Superfamily
DMIJIMIF_01214 2.1e-07 S Protein of unknown function (DUF3021)
DMIJIMIF_01215 4.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DMIJIMIF_01216 0.0 L Plasmid pRiA4b ORF-3-like protein
DMIJIMIF_01217 3.9e-246 brnQ U Component of the transport system for branched-chain amino acids
DMIJIMIF_01218 2.4e-118 3.6.1.55 F NUDIX domain
DMIJIMIF_01219 5.7e-77 ltrA S Bacterial low temperature requirement A protein (LtrA)
DMIJIMIF_01220 2e-230 L Transposase
DMIJIMIF_01221 7.3e-113 S Protein of unknown function (DUF1211)
DMIJIMIF_01222 5.7e-121 lsa S ABC transporter
DMIJIMIF_01223 4.2e-203 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DMIJIMIF_01224 4e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
DMIJIMIF_01225 6.3e-229 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
DMIJIMIF_01226 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
DMIJIMIF_01227 7e-111 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DMIJIMIF_01228 3.6e-202 G Glycosyl hydrolases family 8
DMIJIMIF_01229 9.7e-247 ydaM M Glycosyl transferase
DMIJIMIF_01231 1.4e-150
DMIJIMIF_01232 2.4e-130 M Peptidase family M1 domain
DMIJIMIF_01233 4.4e-83 cutC P Participates in the control of copper homeostasis
DMIJIMIF_01234 1.1e-40 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
DMIJIMIF_01235 9.2e-154 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
DMIJIMIF_01236 1.6e-75 yvfR V ABC transporter
DMIJIMIF_01237 9.3e-53 yvfS V ABC-2 type transporter
DMIJIMIF_01238 2.3e-55 salK 2.7.13.3 T Histidine kinase
DMIJIMIF_01239 2.3e-81 desR K helix_turn_helix, Lux Regulon
DMIJIMIF_01240 4.4e-179 C Oxidoreductase
DMIJIMIF_01241 2.3e-14 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DMIJIMIF_01242 0.0 UW LPXTG-motif cell wall anchor domain protein
DMIJIMIF_01243 3.8e-85 S ABC-type cobalt transport system, permease component
DMIJIMIF_01245 2.7e-59 L An automated process has identified a potential problem with this gene model
DMIJIMIF_01246 6.7e-235 mepA V MATE efflux family protein
DMIJIMIF_01247 1.5e-77 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
DMIJIMIF_01248 2.4e-69 S Putative adhesin
DMIJIMIF_01249 6.9e-107 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DMIJIMIF_01250 1.1e-19 1.3.5.4 C FAD dependent oxidoreductase
DMIJIMIF_01251 1.2e-85 dps P Belongs to the Dps family
DMIJIMIF_01252 3.4e-178 MA20_14895 S Conserved hypothetical protein 698
DMIJIMIF_01254 2.1e-190 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DMIJIMIF_01255 8.4e-102 3.6.1.27 I Acid phosphatase homologues
DMIJIMIF_01256 4.3e-147 yitS S Uncharacterised protein, DegV family COG1307
DMIJIMIF_01257 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DMIJIMIF_01258 7e-89 S Domain of unknown function (DUF4767)
DMIJIMIF_01259 2.1e-85 C nitroreductase
DMIJIMIF_01260 8.3e-146 ypbG 2.7.1.2 GK ROK family
DMIJIMIF_01261 5.2e-275 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DMIJIMIF_01262 3.7e-223 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DMIJIMIF_01263 3.8e-120 gmuR K UTRA
DMIJIMIF_01264 1.3e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DMIJIMIF_01265 3.2e-71 S Domain of unknown function (DUF3284)
DMIJIMIF_01266 8.7e-60 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
DMIJIMIF_01267 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
DMIJIMIF_01268 1.1e-127 K UTRA domain
DMIJIMIF_01269 2.4e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DMIJIMIF_01270 1.3e-72 alkD L DNA alkylation repair enzyme
DMIJIMIF_01271 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
DMIJIMIF_01272 2.3e-82
DMIJIMIF_01273 2.3e-38 C FMN_bind
DMIJIMIF_01274 4.6e-299 I Protein of unknown function (DUF2974)
DMIJIMIF_01275 1.1e-195 pbpX1 V Beta-lactamase
DMIJIMIF_01276 1.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DMIJIMIF_01277 3.8e-218 aspC 2.6.1.1 E Aminotransferase
DMIJIMIF_01278 7.8e-143 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DMIJIMIF_01279 2.8e-176 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DMIJIMIF_01280 8.9e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
DMIJIMIF_01281 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
DMIJIMIF_01282 4.4e-247 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DMIJIMIF_01283 3.9e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
DMIJIMIF_01284 1.5e-191 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DMIJIMIF_01285 1e-102 yjeM E Amino acid permease
DMIJIMIF_01286 1.3e-22 yjeM E Amino Acid
DMIJIMIF_01287 3.7e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
DMIJIMIF_01288 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DMIJIMIF_01289 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DMIJIMIF_01290 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DMIJIMIF_01291 8.3e-151
DMIJIMIF_01292 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DMIJIMIF_01293 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DMIJIMIF_01294 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
DMIJIMIF_01295 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
DMIJIMIF_01296 0.0 comEC S Competence protein ComEC
DMIJIMIF_01297 7e-79 comEA L Competence protein ComEA
DMIJIMIF_01298 3.3e-189 ylbL T Belongs to the peptidase S16 family
DMIJIMIF_01299 1.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DMIJIMIF_01300 1.9e-95 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
DMIJIMIF_01301 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
DMIJIMIF_01302 2.7e-211 ftsW D Belongs to the SEDS family
DMIJIMIF_01303 0.0 typA T GTP-binding protein TypA
DMIJIMIF_01304 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DMIJIMIF_01305 2.3e-31 ykzG S Belongs to the UPF0356 family
DMIJIMIF_01306 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DMIJIMIF_01307 1.8e-181 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
DMIJIMIF_01308 2e-294 L Nuclease-related domain
DMIJIMIF_01309 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DMIJIMIF_01310 1.6e-104 S Repeat protein
DMIJIMIF_01311 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
DMIJIMIF_01312 4.6e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
DMIJIMIF_01313 2.2e-57 XK27_04120 S Putative amino acid metabolism
DMIJIMIF_01314 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
DMIJIMIF_01315 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DMIJIMIF_01316 1e-37
DMIJIMIF_01317 3.7e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
DMIJIMIF_01318 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
DMIJIMIF_01319 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DMIJIMIF_01320 1.4e-73 gpsB D DivIVA domain protein
DMIJIMIF_01321 6.7e-150 ylmH S S4 domain protein
DMIJIMIF_01322 1.7e-45 yggT S YGGT family
DMIJIMIF_01323 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DMIJIMIF_01324 4.7e-212 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DMIJIMIF_01325 2.6e-247 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
DMIJIMIF_01326 4.1e-153 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
DMIJIMIF_01327 4.4e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DMIJIMIF_01328 5.6e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DMIJIMIF_01329 1.1e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DMIJIMIF_01330 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
DMIJIMIF_01331 4.1e-54 ftsL D Cell division protein FtsL
DMIJIMIF_01332 3.8e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DMIJIMIF_01333 6.3e-78 mraZ K Belongs to the MraZ family
DMIJIMIF_01334 6.4e-54 S Protein of unknown function (DUF3397)
DMIJIMIF_01336 1.2e-94 mreD
DMIJIMIF_01337 6.7e-148 mreC M Involved in formation and maintenance of cell shape
DMIJIMIF_01338 2.4e-176 mreB D cell shape determining protein MreB
DMIJIMIF_01339 2.3e-108 radC L DNA repair protein
DMIJIMIF_01340 2e-126 S Haloacid dehalogenase-like hydrolase
DMIJIMIF_01341 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
DMIJIMIF_01342 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DMIJIMIF_01343 1.3e-51
DMIJIMIF_01344 1e-133 S AAA domain, putative AbiEii toxin, Type IV TA system
DMIJIMIF_01345 0.0 3.6.3.8 P P-type ATPase
DMIJIMIF_01347 2.9e-44
DMIJIMIF_01348 1.5e-94 S Protein of unknown function (DUF3990)
DMIJIMIF_01349 5.7e-230 L Transposase
DMIJIMIF_01350 4.7e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
DMIJIMIF_01351 1.2e-65 2.4.1.83 GT2 S GtrA-like protein
DMIJIMIF_01352 9.1e-28 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DMIJIMIF_01353 1.7e-120 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DMIJIMIF_01354 3.5e-185 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
DMIJIMIF_01355 4.3e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DMIJIMIF_01356 4.3e-214 iscS2 2.8.1.7 E Aminotransferase class V
DMIJIMIF_01357 6.2e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DMIJIMIF_01358 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DMIJIMIF_01359 9.9e-85 yueI S Protein of unknown function (DUF1694)
DMIJIMIF_01360 4.8e-238 rarA L recombination factor protein RarA
DMIJIMIF_01361 8.4e-39
DMIJIMIF_01362 9.8e-77 usp6 T universal stress protein
DMIJIMIF_01363 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
DMIJIMIF_01364 4.6e-112 L Transposase
DMIJIMIF_01365 1.2e-216 rodA D Belongs to the SEDS family
DMIJIMIF_01366 1.5e-33 S Protein of unknown function (DUF2969)
DMIJIMIF_01367 2e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
DMIJIMIF_01368 2.5e-178 mbl D Cell shape determining protein MreB Mrl
DMIJIMIF_01369 2e-230 L Transposase
DMIJIMIF_01371 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
DMIJIMIF_01372 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DMIJIMIF_01373 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DMIJIMIF_01374 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DMIJIMIF_01375 2e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DMIJIMIF_01376 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DMIJIMIF_01377 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DMIJIMIF_01378 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
DMIJIMIF_01379 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DMIJIMIF_01380 2.9e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
DMIJIMIF_01381 1.1e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DMIJIMIF_01382 6.9e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DMIJIMIF_01383 4.9e-113 tdk 2.7.1.21 F thymidine kinase
DMIJIMIF_01384 5.8e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
DMIJIMIF_01387 1.1e-194 ampC V Beta-lactamase
DMIJIMIF_01388 2e-218 EGP Major facilitator Superfamily
DMIJIMIF_01389 2.2e-254 pgi 5.3.1.9 G Belongs to the GPI family
DMIJIMIF_01390 8.5e-105 vanZ V VanZ like family
DMIJIMIF_01391 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DMIJIMIF_01392 4.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
DMIJIMIF_01393 2e-129 K Transcriptional regulatory protein, C terminal
DMIJIMIF_01394 7.7e-67 S SdpI/YhfL protein family
DMIJIMIF_01395 6.5e-192 manA 5.3.1.8 G mannose-6-phosphate isomerase
DMIJIMIF_01396 1e-223 patB 4.4.1.8 E Aminotransferase, class I
DMIJIMIF_01397 4e-84 M Protein of unknown function (DUF3737)
DMIJIMIF_01399 2.4e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DMIJIMIF_01400 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
DMIJIMIF_01401 1.6e-21
DMIJIMIF_01402 3.8e-77 comGF U Putative Competence protein ComGF
DMIJIMIF_01403 2.3e-41
DMIJIMIF_01404 7.4e-71
DMIJIMIF_01405 3.1e-43 comGC U competence protein ComGC
DMIJIMIF_01406 1.1e-168 comGB NU type II secretion system
DMIJIMIF_01407 5.8e-180 comGA NU Type II IV secretion system protein
DMIJIMIF_01408 8.9e-133 yebC K Transcriptional regulatory protein
DMIJIMIF_01409 2e-94 S VanZ like family
DMIJIMIF_01410 8.2e-111 ylbE GM NAD(P)H-binding
DMIJIMIF_01411 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DMIJIMIF_01413 2.5e-305 E Amino acid permease
DMIJIMIF_01414 5.9e-177 D Alpha beta
DMIJIMIF_01415 2.9e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DMIJIMIF_01416 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
DMIJIMIF_01417 1.7e-143 licT K CAT RNA binding domain
DMIJIMIF_01418 1.9e-206 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
DMIJIMIF_01419 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DMIJIMIF_01420 1.6e-118
DMIJIMIF_01421 3.9e-75 K Penicillinase repressor
DMIJIMIF_01422 2.4e-147 S hydrolase
DMIJIMIF_01423 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DMIJIMIF_01424 6.3e-171 ybbR S YbbR-like protein
DMIJIMIF_01425 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DMIJIMIF_01426 7.3e-208 potD P ABC transporter
DMIJIMIF_01427 2.1e-127 potC P ABC transporter permease
DMIJIMIF_01428 1.4e-131 potB P ABC transporter permease
DMIJIMIF_01429 4.1e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DMIJIMIF_01430 1.8e-164 murB 1.3.1.98 M Cell wall formation
DMIJIMIF_01431 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
DMIJIMIF_01432 1.4e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
DMIJIMIF_01433 6.3e-182 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
DMIJIMIF_01434 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DMIJIMIF_01435 1.8e-156 ycsE S Sucrose-6F-phosphate phosphohydrolase
DMIJIMIF_01436 1.2e-94
DMIJIMIF_01437 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DMIJIMIF_01438 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
DMIJIMIF_01439 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DMIJIMIF_01440 9.5e-189 cggR K Putative sugar-binding domain
DMIJIMIF_01442 2.4e-289
DMIJIMIF_01443 5e-273 ycaM E amino acid
DMIJIMIF_01444 3.1e-139 S Cysteine-rich secretory protein family
DMIJIMIF_01445 5.4e-77 K MerR HTH family regulatory protein
DMIJIMIF_01446 6.4e-263 lmrB EGP Major facilitator Superfamily
DMIJIMIF_01447 8.7e-96 S Domain of unknown function (DUF4811)
DMIJIMIF_01448 8.7e-131 ybbM S Uncharacterised protein family (UPF0014)
DMIJIMIF_01449 4.9e-111 ybbL S ABC transporter, ATP-binding protein
DMIJIMIF_01450 0.0 S SH3-like domain
DMIJIMIF_01451 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DMIJIMIF_01452 1.8e-170 whiA K May be required for sporulation
DMIJIMIF_01453 1.1e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
DMIJIMIF_01454 6.2e-165 rapZ S Displays ATPase and GTPase activities
DMIJIMIF_01455 1.1e-90 S Short repeat of unknown function (DUF308)
DMIJIMIF_01456 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DMIJIMIF_01457 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DMIJIMIF_01458 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
DMIJIMIF_01459 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DMIJIMIF_01460 3.9e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
DMIJIMIF_01461 4.9e-159 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DMIJIMIF_01462 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DMIJIMIF_01463 5.1e-17
DMIJIMIF_01464 1.3e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DMIJIMIF_01465 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DMIJIMIF_01466 4.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DMIJIMIF_01467 1.1e-135 comFC S Competence protein
DMIJIMIF_01468 3e-245 comFA L Helicase C-terminal domain protein
DMIJIMIF_01469 4.3e-118 yvyE 3.4.13.9 S YigZ family
DMIJIMIF_01470 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
DMIJIMIF_01471 4.3e-220 rny S Endoribonuclease that initiates mRNA decay
DMIJIMIF_01472 8.5e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DMIJIMIF_01473 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DMIJIMIF_01474 2.2e-95 ymfM S Helix-turn-helix domain
DMIJIMIF_01475 1.4e-133 IQ Enoyl-(Acyl carrier protein) reductase
DMIJIMIF_01476 3.9e-237 S Peptidase M16
DMIJIMIF_01477 2.6e-222 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
DMIJIMIF_01478 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
DMIJIMIF_01479 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
DMIJIMIF_01480 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DMIJIMIF_01481 1.7e-213 yubA S AI-2E family transporter
DMIJIMIF_01482 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
DMIJIMIF_01483 8.2e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
DMIJIMIF_01484 2.5e-92 S SNARE associated Golgi protein
DMIJIMIF_01485 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
DMIJIMIF_01486 1.2e-171 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DMIJIMIF_01487 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DMIJIMIF_01488 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
DMIJIMIF_01489 3.6e-111 yjbK S CYTH
DMIJIMIF_01490 1.2e-114 yjbH Q Thioredoxin
DMIJIMIF_01491 5.8e-160 coiA 3.6.4.12 S Competence protein
DMIJIMIF_01492 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
DMIJIMIF_01493 6.1e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DMIJIMIF_01494 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DMIJIMIF_01495 8.5e-41 ptsH G phosphocarrier protein HPR
DMIJIMIF_01496 5.3e-26
DMIJIMIF_01497 0.0 clpE O Belongs to the ClpA ClpB family
DMIJIMIF_01498 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
DMIJIMIF_01499 3.5e-31
DMIJIMIF_01500 2.3e-51 L Transposase
DMIJIMIF_01501 3.4e-24
DMIJIMIF_01504 3.6e-14
DMIJIMIF_01507 1.6e-264 V ABC transporter transmembrane region
DMIJIMIF_01508 2.4e-147
DMIJIMIF_01509 3.6e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DMIJIMIF_01510 1.1e-140 hlyX S Transporter associated domain
DMIJIMIF_01511 1.6e-74
DMIJIMIF_01512 1.6e-85
DMIJIMIF_01513 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
DMIJIMIF_01514 8.7e-262 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DMIJIMIF_01515 6.7e-178 D Alpha beta
DMIJIMIF_01516 9.4e-46
DMIJIMIF_01517 1.9e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
DMIJIMIF_01518 6.3e-216 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
DMIJIMIF_01519 5.1e-215 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
DMIJIMIF_01520 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
DMIJIMIF_01521 3.6e-163 yihY S Belongs to the UPF0761 family
DMIJIMIF_01522 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
DMIJIMIF_01523 4.1e-80 fld C Flavodoxin
DMIJIMIF_01524 3.1e-87 gtcA S Teichoic acid glycosylation protein
DMIJIMIF_01525 5.9e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DMIJIMIF_01526 2.6e-161 V ABC transporter transmembrane region
DMIJIMIF_01529 1.4e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DMIJIMIF_01530 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
DMIJIMIF_01531 4.7e-131 M Glycosyl hydrolases family 25
DMIJIMIF_01532 9.7e-231 potE E amino acid
DMIJIMIF_01533 0.0 1.3.5.4 C FAD binding domain
DMIJIMIF_01534 7.7e-89 L PFAM transposase, IS4 family protein
DMIJIMIF_01535 0.0 1.3.5.4 C FAD binding domain
DMIJIMIF_01536 1.3e-102 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DMIJIMIF_01537 2.2e-249 yhdP S Transporter associated domain
DMIJIMIF_01538 2.3e-119 C nitroreductase
DMIJIMIF_01539 2.1e-39
DMIJIMIF_01540 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DMIJIMIF_01541 7e-81
DMIJIMIF_01542 6e-146 glvR K Helix-turn-helix domain, rpiR family
DMIJIMIF_01543 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
DMIJIMIF_01544 7.5e-149 S hydrolase
DMIJIMIF_01545 3.9e-134 rssA S Phospholipase, patatin family
DMIJIMIF_01546 3.1e-102 L PFAM Integrase catalytic region
DMIJIMIF_01547 2.6e-41 L Helix-turn-helix domain
DMIJIMIF_01548 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
DMIJIMIF_01549 3.7e-137 glcR K DeoR C terminal sensor domain
DMIJIMIF_01550 3.2e-59 S Enterocin A Immunity
DMIJIMIF_01551 4.7e-154 S hydrolase
DMIJIMIF_01552 3e-133 ydhQ K UbiC transcription regulator-associated domain protein
DMIJIMIF_01553 1.6e-174 rihB 3.2.2.1 F Nucleoside
DMIJIMIF_01554 0.0 kup P Transport of potassium into the cell
DMIJIMIF_01555 3.4e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DMIJIMIF_01556 1.8e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DMIJIMIF_01557 1.3e-161 2.7.7.12 C Domain of unknown function (DUF4931)
DMIJIMIF_01558 2.9e-235 G Bacterial extracellular solute-binding protein
DMIJIMIF_01559 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
DMIJIMIF_01560 2.1e-85
DMIJIMIF_01561 8e-163 S Protein of unknown function (DUF2974)
DMIJIMIF_01562 4.7e-109 glnP P ABC transporter permease
DMIJIMIF_01563 9.7e-91 gluC P ABC transporter permease
DMIJIMIF_01564 2.4e-150 glnH ET ABC transporter substrate-binding protein
DMIJIMIF_01565 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DMIJIMIF_01566 3.6e-114 udk 2.7.1.48 F Zeta toxin
DMIJIMIF_01567 3.3e-253 G MFS/sugar transport protein
DMIJIMIF_01568 3.8e-102 S ABC-type cobalt transport system, permease component
DMIJIMIF_01569 0.0 V ABC transporter transmembrane region
DMIJIMIF_01570 1.7e-310 XK27_09600 V ABC transporter, ATP-binding protein
DMIJIMIF_01571 1.4e-80 K Transcriptional regulator, MarR family
DMIJIMIF_01572 1.9e-147 glnH ET ABC transporter
DMIJIMIF_01573 1.4e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
DMIJIMIF_01574 2.3e-243 steT E amino acid
DMIJIMIF_01575 8e-241 steT E amino acid
DMIJIMIF_01576 6.8e-150
DMIJIMIF_01577 5.9e-174 S Aldo keto reductase
DMIJIMIF_01578 5.8e-310 ybiT S ABC transporter, ATP-binding protein
DMIJIMIF_01579 6.7e-223 L Transposase
DMIJIMIF_01580 1.8e-203 pepA E M42 glutamyl aminopeptidase
DMIJIMIF_01581 6.7e-223 L Transposase
DMIJIMIF_01582 2.6e-103
DMIJIMIF_01583 5e-07
DMIJIMIF_01584 2e-136
DMIJIMIF_01585 1.1e-217 mdtG EGP Major facilitator Superfamily
DMIJIMIF_01586 2.7e-261 emrY EGP Major facilitator Superfamily
DMIJIMIF_01587 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DMIJIMIF_01588 2.9e-238 pyrP F Permease
DMIJIMIF_01589 1.2e-293 K Putative DNA-binding domain
DMIJIMIF_01590 9.3e-35
DMIJIMIF_01591 4.9e-159 S reductase
DMIJIMIF_01592 6.3e-46
DMIJIMIF_01593 1.1e-207 V ABC transporter transmembrane region
DMIJIMIF_01594 8.3e-95 K Helix-turn-helix XRE-family like proteins
DMIJIMIF_01595 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
DMIJIMIF_01596 3.3e-33 4.2.1.53 S Myosin-crossreactive antigen
DMIJIMIF_01597 1.7e-260 emrY EGP Major facilitator Superfamily
DMIJIMIF_01602 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
DMIJIMIF_01603 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DMIJIMIF_01604 3.2e-200 pbpX V Beta-lactamase
DMIJIMIF_01605 2.8e-244 nhaC C Na H antiporter NhaC
DMIJIMIF_01606 2.4e-147 I transferase activity, transferring acyl groups other than amino-acyl groups
DMIJIMIF_01607 2.6e-57
DMIJIMIF_01608 4.3e-108 ybhL S Belongs to the BI1 family
DMIJIMIF_01609 7.2e-172 yegS 2.7.1.107 G Lipid kinase
DMIJIMIF_01610 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DMIJIMIF_01611 2.1e-266 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DMIJIMIF_01612 3.4e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DMIJIMIF_01613 5.8e-203 camS S sex pheromone
DMIJIMIF_01614 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DMIJIMIF_01615 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
DMIJIMIF_01616 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
DMIJIMIF_01618 1.4e-83 ydcK S Belongs to the SprT family
DMIJIMIF_01619 9.1e-135 M Glycosyltransferase sugar-binding region containing DXD motif
DMIJIMIF_01620 6.4e-260 epsU S Polysaccharide biosynthesis protein
DMIJIMIF_01621 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
DMIJIMIF_01622 0.0 pacL 3.6.3.8 P P-type ATPase
DMIJIMIF_01623 4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
DMIJIMIF_01624 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DMIJIMIF_01625 2e-205 csaB M Glycosyl transferases group 1
DMIJIMIF_01626 4.3e-135 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
DMIJIMIF_01627 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
DMIJIMIF_01628 4.6e-123 gntR1 K UTRA
DMIJIMIF_01629 1.1e-179
DMIJIMIF_01630 1e-298 oppA2 E ABC transporter, substratebinding protein
DMIJIMIF_01633 1.1e-240 npr 1.11.1.1 C NADH oxidase
DMIJIMIF_01634 7.7e-12
DMIJIMIF_01635 1.3e-22 3.6.4.12 S transposase or invertase
DMIJIMIF_01636 8.7e-228 slpX S SLAP domain
DMIJIMIF_01637 9.8e-144 K SIS domain
DMIJIMIF_01638 5.1e-122 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
DMIJIMIF_01639 1.2e-180 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
DMIJIMIF_01640 7.7e-219 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
DMIJIMIF_01642 1.9e-113 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
DMIJIMIF_01643 1.1e-113 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
DMIJIMIF_01644 2.2e-88 G Histidine phosphatase superfamily (branch 1)
DMIJIMIF_01645 1.2e-105 G Phosphoglycerate mutase family
DMIJIMIF_01646 1.2e-159 D nuclear chromosome segregation
DMIJIMIF_01647 6.8e-79 M LysM domain protein
DMIJIMIF_01648 1.5e-73 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DMIJIMIF_01649 6.2e-12
DMIJIMIF_01650 6.8e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
DMIJIMIF_01651 4.6e-31
DMIJIMIF_01653 1.5e-70 S Iron-sulphur cluster biosynthesis
DMIJIMIF_01654 3.8e-113 yncA 2.3.1.79 S Maltose acetyltransferase
DMIJIMIF_01655 1e-61 psiE S Phosphate-starvation-inducible E
DMIJIMIF_01657 1.2e-140 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
DMIJIMIF_01658 1.9e-59
DMIJIMIF_01659 0.0 lhr L DEAD DEAH box helicase
DMIJIMIF_01660 2.4e-253 P P-loop Domain of unknown function (DUF2791)
DMIJIMIF_01661 0.0 S TerB-C domain
DMIJIMIF_01662 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
DMIJIMIF_01663 3.9e-298 V ABC transporter transmembrane region
DMIJIMIF_01664 2.6e-222 L Transposase
DMIJIMIF_01666 2.3e-156 K Helix-turn-helix XRE-family like proteins
DMIJIMIF_01667 3.1e-102 L PFAM Integrase catalytic region
DMIJIMIF_01668 2.6e-41 L Helix-turn-helix domain
DMIJIMIF_01669 3e-69 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
DMIJIMIF_01670 8.4e-19
DMIJIMIF_01671 1.3e-136 4.1.1.44 S Carboxymuconolactone decarboxylase family
DMIJIMIF_01672 2.5e-222 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
DMIJIMIF_01673 7.1e-80 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DMIJIMIF_01674 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
DMIJIMIF_01675 0.0 mtlR K Mga helix-turn-helix domain
DMIJIMIF_01676 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DMIJIMIF_01677 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DMIJIMIF_01678 4.3e-245 cycA E Amino acid permease
DMIJIMIF_01679 1.8e-90 maa S transferase hexapeptide repeat
DMIJIMIF_01680 3.3e-158 K Transcriptional regulator
DMIJIMIF_01681 9.9e-64 manO S Domain of unknown function (DUF956)
DMIJIMIF_01682 1e-173 manN G system, mannose fructose sorbose family IID component
DMIJIMIF_01683 1.7e-129 manY G PTS system
DMIJIMIF_01684 2.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
DMIJIMIF_01686 1.2e-85 S COG NOG38524 non supervised orthologous group
DMIJIMIF_01687 1.3e-207 UW LPXTG-motif cell wall anchor domain protein
DMIJIMIF_01688 9.6e-45 UW LPXTG-motif cell wall anchor domain protein
DMIJIMIF_01689 3e-81 UW LPXTG-motif cell wall anchor domain protein
DMIJIMIF_01690 1.9e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DMIJIMIF_01691 2.2e-99 J Acetyltransferase (GNAT) domain
DMIJIMIF_01692 1.4e-110 yjbF S SNARE associated Golgi protein
DMIJIMIF_01693 6.5e-153 I alpha/beta hydrolase fold
DMIJIMIF_01694 1.9e-158 hipB K Helix-turn-helix
DMIJIMIF_01695 8.1e-93 F Nucleoside 2-deoxyribosyltransferase
DMIJIMIF_01696 1.2e-260 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
DMIJIMIF_01697 6.1e-164
DMIJIMIF_01698 0.0 ydgH S MMPL family
DMIJIMIF_01699 2.3e-99 yobS K Bacterial regulatory proteins, tetR family
DMIJIMIF_01700 8.8e-149 3.5.2.6 V Beta-lactamase enzyme family
DMIJIMIF_01701 1.8e-154 corA P CorA-like Mg2+ transporter protein
DMIJIMIF_01702 2.5e-239 G Bacterial extracellular solute-binding protein
DMIJIMIF_01703 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
DMIJIMIF_01704 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
DMIJIMIF_01705 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
DMIJIMIF_01706 1e-201 malK P ATPases associated with a variety of cellular activities
DMIJIMIF_01707 1.8e-283 pipD E Dipeptidase
DMIJIMIF_01708 1.9e-158 endA F DNA RNA non-specific endonuclease
DMIJIMIF_01709 3.2e-183 dnaQ 2.7.7.7 L EXOIII
DMIJIMIF_01710 2.4e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DMIJIMIF_01711 6.7e-116 yviA S Protein of unknown function (DUF421)
DMIJIMIF_01712 1.1e-72 S Protein of unknown function (DUF3290)
DMIJIMIF_01713 9e-141 pnuC H nicotinamide mononucleotide transporter
DMIJIMIF_01714 1.8e-13
DMIJIMIF_01715 9.3e-130 S PAS domain
DMIJIMIF_01716 9e-279 V ABC transporter transmembrane region
DMIJIMIF_01717 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
DMIJIMIF_01718 3.1e-130 T Transcriptional regulatory protein, C terminal
DMIJIMIF_01719 1.5e-247 T GHKL domain
DMIJIMIF_01720 2.9e-88 S Peptidase propeptide and YPEB domain
DMIJIMIF_01721 2.6e-101 S Peptidase propeptide and YPEB domain
DMIJIMIF_01722 3.7e-96 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
DMIJIMIF_01723 2.1e-76 yybA 2.3.1.57 K Transcriptional regulator
DMIJIMIF_01724 4e-242 V ABC transporter transmembrane region
DMIJIMIF_01725 0.0 oppA3 E ABC transporter, substratebinding protein
DMIJIMIF_01726 9.9e-62 ypaA S Protein of unknown function (DUF1304)
DMIJIMIF_01727 1.5e-101 S Peptidase propeptide and YPEB domain
DMIJIMIF_01728 4.4e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DMIJIMIF_01729 2.1e-171 coaA 2.7.1.33 F Pantothenic acid kinase
DMIJIMIF_01730 1.4e-98 E GDSL-like Lipase/Acylhydrolase
DMIJIMIF_01731 1.6e-71 yjcF S Acetyltransferase (GNAT) domain
DMIJIMIF_01732 8.7e-145 aatB ET ABC transporter substrate-binding protein
DMIJIMIF_01733 1.6e-106 glnQ 3.6.3.21 E ABC transporter
DMIJIMIF_01734 3.2e-110 glnP P ABC transporter permease
DMIJIMIF_01735 0.0 helD 3.6.4.12 L DNA helicase
DMIJIMIF_01736 2.7e-124 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
DMIJIMIF_01737 1.4e-126 pgm3 G Phosphoglycerate mutase family
DMIJIMIF_01738 1.4e-242 S response to antibiotic
DMIJIMIF_01739 1.9e-124
DMIJIMIF_01740 0.0 3.6.3.8 P P-type ATPase
DMIJIMIF_01741 8.7e-66 2.7.1.191 G PTS system fructose IIA component
DMIJIMIF_01742 5.2e-41
DMIJIMIF_01743 7.7e-09
DMIJIMIF_01744 1.5e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
DMIJIMIF_01745 1.8e-136 glvR K Helix-turn-helix domain, rpiR family
DMIJIMIF_01746 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
DMIJIMIF_01747 1.1e-150
DMIJIMIF_01748 8.4e-24
DMIJIMIF_01749 1.1e-90 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DMIJIMIF_01750 2e-157 S Archaea bacterial proteins of unknown function
DMIJIMIF_01751 2.5e-106 3.2.2.20 K acetyltransferase
DMIJIMIF_01753 9.5e-81 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
DMIJIMIF_01754 7.6e-39 KQ helix_turn_helix, mercury resistance
DMIJIMIF_01756 1.2e-142 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DMIJIMIF_01757 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
DMIJIMIF_01758 7e-31 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
DMIJIMIF_01759 4.6e-20 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
DMIJIMIF_01760 1.2e-23 6.3.4.4 S Zeta toxin
DMIJIMIF_01761 6.2e-42
DMIJIMIF_01762 2.9e-31
DMIJIMIF_01763 8.7e-10 M Host cell surface-exposed lipoprotein
DMIJIMIF_01764 4e-122 L Transposase
DMIJIMIF_01765 5.2e-35 L Transposase
DMIJIMIF_01766 7.1e-94 J Domain of unknown function (DUF4041)
DMIJIMIF_01768 7.5e-32
DMIJIMIF_01770 6.9e-22 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DMIJIMIF_01771 8.8e-34 S Protein of unknown function (DUF3037)
DMIJIMIF_01772 1e-36
DMIJIMIF_01773 3.3e-10
DMIJIMIF_01774 3.4e-126 L COG2826 Transposase and inactivated derivatives, IS30 family
DMIJIMIF_01775 1e-38 L COG2826 Transposase and inactivated derivatives, IS30 family
DMIJIMIF_01777 2.8e-255 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
DMIJIMIF_01778 6e-205 glf 5.4.99.9 M UDP-galactopyranose mutase
DMIJIMIF_01779 3e-81 M Glycosyltransferase like family 2
DMIJIMIF_01780 1.4e-59 S Psort location CytoplasmicMembrane, score 9.99
DMIJIMIF_01781 1.3e-84 M Glycosyl transferases group 1
DMIJIMIF_01782 6.4e-36 GT2 M transferase activity, transferring glycosyl groups
DMIJIMIF_01783 1.4e-117 cps1D M Domain of unknown function (DUF4422)
DMIJIMIF_01784 7.6e-99 rfbP 2.7.8.6 M Bacterial sugar transferase
DMIJIMIF_01785 1.1e-146 ywqE 3.1.3.48 GM PHP domain protein
DMIJIMIF_01786 5.2e-123 ywqD 2.7.10.1 D Capsular exopolysaccharide family
DMIJIMIF_01787 3e-143 epsB M biosynthesis protein
DMIJIMIF_01788 3.8e-177 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DMIJIMIF_01789 1.3e-41 relB L RelB antitoxin
DMIJIMIF_01791 3.6e-222 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DMIJIMIF_01792 6.8e-179 S Cysteine-rich secretory protein family
DMIJIMIF_01794 1.5e-12
DMIJIMIF_01795 2e-118 M NlpC/P60 family
DMIJIMIF_01796 3e-136 M NlpC P60 family protein
DMIJIMIF_01797 4.7e-86 M NlpC/P60 family
DMIJIMIF_01798 2.7e-94 gmk2 2.7.4.8 F Guanylate kinase homologues.
DMIJIMIF_01799 9.3e-44
DMIJIMIF_01800 4.5e-280 S O-antigen ligase like membrane protein
DMIJIMIF_01801 2.2e-111
DMIJIMIF_01802 6.6e-223 tnpB L Putative transposase DNA-binding domain
DMIJIMIF_01803 2.2e-78 nrdI F NrdI Flavodoxin like
DMIJIMIF_01804 2.2e-176 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DMIJIMIF_01805 8.6e-69
DMIJIMIF_01806 3.5e-111 yvpB S Peptidase_C39 like family
DMIJIMIF_01807 3.6e-82 S Threonine/Serine exporter, ThrE
DMIJIMIF_01808 7e-136 thrE S Putative threonine/serine exporter
DMIJIMIF_01809 7.1e-289 S ABC transporter
DMIJIMIF_01810 2.5e-62
DMIJIMIF_01811 2.2e-102 rimL J Acetyltransferase (GNAT) domain
DMIJIMIF_01812 5.3e-98
DMIJIMIF_01813 6.5e-125 S Protein of unknown function (DUF554)
DMIJIMIF_01814 1.1e-210 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DMIJIMIF_01815 0.0 pepF E oligoendopeptidase F
DMIJIMIF_01816 2.9e-31
DMIJIMIF_01817 1.3e-69 doc S Prophage maintenance system killer protein
DMIJIMIF_01818 2.7e-213 2.1.1.14 E methionine synthase, vitamin-B12 independent
DMIJIMIF_01819 5.2e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DMIJIMIF_01820 9.4e-262 lctP C L-lactate permease
DMIJIMIF_01821 2.5e-128 znuB U ABC 3 transport family
DMIJIMIF_01822 1.6e-117 fhuC P ABC transporter
DMIJIMIF_01823 4.9e-149 psaA P Belongs to the bacterial solute-binding protein 9 family
DMIJIMIF_01824 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
DMIJIMIF_01825 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
DMIJIMIF_01826 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
DMIJIMIF_01827 1.8e-136 fruR K DeoR C terminal sensor domain
DMIJIMIF_01828 5.1e-218 natB CP ABC-2 family transporter protein
DMIJIMIF_01829 9.2e-164 natA S ABC transporter, ATP-binding protein
DMIJIMIF_01830 4.9e-29
DMIJIMIF_01831 1.4e-53
DMIJIMIF_01832 5.3e-24
DMIJIMIF_01833 5.3e-30 yozG K Transcriptional regulator
DMIJIMIF_01834 1.8e-77
DMIJIMIF_01835 6.4e-11
DMIJIMIF_01836 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
DMIJIMIF_01837 6e-271 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
DMIJIMIF_01838 3e-24
DMIJIMIF_01839 1.2e-25
DMIJIMIF_01840 2.5e-33
DMIJIMIF_01841 9.6e-55 S Enterocin A Immunity
DMIJIMIF_01842 6.3e-139 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
DMIJIMIF_01843 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DMIJIMIF_01844 4.6e-208 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
DMIJIMIF_01845 9.6e-121 K response regulator
DMIJIMIF_01846 3e-39 S HicB family
DMIJIMIF_01847 4e-202 L Probable transposase
DMIJIMIF_01849 0.0 V ABC transporter
DMIJIMIF_01850 9.6e-303 V ABC transporter, ATP-binding protein
DMIJIMIF_01851 1.4e-136 XK27_01040 S Protein of unknown function (DUF1129)
DMIJIMIF_01852 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DMIJIMIF_01853 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
DMIJIMIF_01854 8.5e-154 spo0J K Belongs to the ParB family
DMIJIMIF_01855 3.4e-138 soj D Sporulation initiation inhibitor
DMIJIMIF_01856 1.3e-148 noc K Belongs to the ParB family
DMIJIMIF_01857 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
DMIJIMIF_01858 3e-53 cvpA S Colicin V production protein
DMIJIMIF_01859 6.6e-181 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DMIJIMIF_01860 1.5e-149 3.1.3.48 T Tyrosine phosphatase family
DMIJIMIF_01861 7e-98 azr 1.5.1.36 S NADPH-dependent FMN reductase
DMIJIMIF_01862 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
DMIJIMIF_01863 3.7e-111 K WHG domain
DMIJIMIF_01864 8e-38
DMIJIMIF_01865 5.3e-275 pipD E Dipeptidase
DMIJIMIF_01866 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
DMIJIMIF_01867 4.7e-175 hrtB V ABC transporter permease
DMIJIMIF_01868 1.1e-92 ygfC K Bacterial regulatory proteins, tetR family
DMIJIMIF_01869 4.6e-111 G phosphoglycerate mutase
DMIJIMIF_01870 3.2e-141 aroD S Alpha/beta hydrolase family
DMIJIMIF_01871 1.1e-141 S Belongs to the UPF0246 family
DMIJIMIF_01872 2e-120
DMIJIMIF_01873 8.7e-158 2.7.7.12 C Domain of unknown function (DUF4931)
DMIJIMIF_01874 9.3e-204 S Putative peptidoglycan binding domain
DMIJIMIF_01875 3.4e-15
DMIJIMIF_01876 3.4e-239 L transposase, IS605 OrfB family
DMIJIMIF_01877 5.4e-128 liaI S membrane
DMIJIMIF_01878 3e-78 XK27_02470 K LytTr DNA-binding domain
DMIJIMIF_01879 7.3e-19 S Sugar efflux transporter for intercellular exchange
DMIJIMIF_01880 9.7e-251 dtpT U amino acid peptide transporter
DMIJIMIF_01881 0.0 pepN 3.4.11.2 E aminopeptidase
DMIJIMIF_01882 2.8e-47 lysM M LysM domain
DMIJIMIF_01883 5.1e-176
DMIJIMIF_01884 3.1e-210 mdtG EGP Major facilitator Superfamily
DMIJIMIF_01885 1.8e-87 ymdB S Macro domain protein
DMIJIMIF_01887 2.3e-09
DMIJIMIF_01888 1.6e-23
DMIJIMIF_01890 1.6e-66 K Helix-turn-helix XRE-family like proteins
DMIJIMIF_01891 9.7e-147 malG P ABC transporter permease
DMIJIMIF_01892 1.4e-248 malF P Binding-protein-dependent transport system inner membrane component
DMIJIMIF_01893 2.3e-213 malE G Bacterial extracellular solute-binding protein
DMIJIMIF_01894 4.7e-210 msmX P Belongs to the ABC transporter superfamily
DMIJIMIF_01895 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
DMIJIMIF_01896 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
DMIJIMIF_01897 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
DMIJIMIF_01898 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
DMIJIMIF_01899 9.1e-77 S PAS domain
DMIJIMIF_01900 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DMIJIMIF_01901 2.4e-178 yvdE K helix_turn _helix lactose operon repressor
DMIJIMIF_01902 6.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
DMIJIMIF_01903 3.5e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DMIJIMIF_01904 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
DMIJIMIF_01905 1.7e-88
DMIJIMIF_01906 3.3e-20
DMIJIMIF_01907 2.4e-136 K Helix-turn-helix XRE-family like proteins
DMIJIMIF_01908 6.4e-251 L Putative transposase DNA-binding domain
DMIJIMIF_01909 4.9e-116 L Resolvase, N-terminal
DMIJIMIF_01910 5.9e-47 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
DMIJIMIF_01911 6.5e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
DMIJIMIF_01912 3.7e-67 L RelB antitoxin
DMIJIMIF_01914 4.8e-128 cobQ S glutamine amidotransferase
DMIJIMIF_01915 4.8e-82 M NlpC/P60 family
DMIJIMIF_01917 8.4e-162
DMIJIMIF_01920 9.3e-38
DMIJIMIF_01921 3e-165 EG EamA-like transporter family
DMIJIMIF_01922 5.3e-167 EG EamA-like transporter family
DMIJIMIF_01923 2.5e-118 yicL EG EamA-like transporter family
DMIJIMIF_01924 2.5e-107
DMIJIMIF_01925 1.6e-109
DMIJIMIF_01926 4e-187 XK27_05540 S DUF218 domain
DMIJIMIF_01927 2.3e-262 yheS_2 S ATPases associated with a variety of cellular activities
DMIJIMIF_01928 3.5e-88
DMIJIMIF_01929 1.1e-56
DMIJIMIF_01930 2.5e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DMIJIMIF_01931 1.4e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DMIJIMIF_01932 7e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DMIJIMIF_01935 2e-205 4.2.1.126 S Bacterial protein of unknown function (DUF871)
DMIJIMIF_01936 1.3e-190 asnA 6.3.1.1 F aspartate--ammonia ligase
DMIJIMIF_01937 3.1e-102 L PFAM Integrase catalytic region
DMIJIMIF_01938 2.6e-41 L Helix-turn-helix domain
DMIJIMIF_01939 3e-230 steT_1 E amino acid
DMIJIMIF_01940 1.5e-135 puuD S peptidase C26
DMIJIMIF_01941 1.2e-247 yifK E Amino acid permease
DMIJIMIF_01942 2.3e-233 cycA E Amino acid permease
DMIJIMIF_01943 1.7e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DMIJIMIF_01944 0.0 clpE O AAA domain (Cdc48 subfamily)
DMIJIMIF_01945 1.2e-168 S Alpha/beta hydrolase of unknown function (DUF915)
DMIJIMIF_01946 8.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DMIJIMIF_01947 2.3e-125 XK27_06785 V ABC transporter, ATP-binding protein
DMIJIMIF_01948 0.0 XK27_06780 V ABC transporter permease
DMIJIMIF_01949 1.9e-36
DMIJIMIF_01950 1.2e-291 ytgP S Polysaccharide biosynthesis protein
DMIJIMIF_01951 2.7e-137 lysA2 M Glycosyl hydrolases family 25
DMIJIMIF_01952 6.7e-133 S Protein of unknown function (DUF975)
DMIJIMIF_01953 4.8e-171 pbpX2 V Beta-lactamase
DMIJIMIF_01954 3.1e-245 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DMIJIMIF_01955 9.7e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DMIJIMIF_01956 1.3e-237 dltB M MBOAT, membrane-bound O-acyltransferase family
DMIJIMIF_01957 7.7e-288 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DMIJIMIF_01958 5.2e-19 S D-Ala-teichoic acid biosynthesis protein
DMIJIMIF_01959 4.7e-48
DMIJIMIF_01960 7.7e-216 ywhK S Membrane
DMIJIMIF_01961 5.1e-81 ykuL S (CBS) domain
DMIJIMIF_01962 0.0 cadA P P-type ATPase
DMIJIMIF_01963 5.7e-62
DMIJIMIF_01964 2.8e-205 napA P Sodium/hydrogen exchanger family
DMIJIMIF_01965 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
DMIJIMIF_01966 3.2e-43 S YoeB-like toxin of bacterial type II toxin-antitoxin system
DMIJIMIF_01967 3.7e-277 V ABC transporter transmembrane region
DMIJIMIF_01968 3.3e-63 S Putative adhesin
DMIJIMIF_01969 2e-155 mutR K Helix-turn-helix XRE-family like proteins
DMIJIMIF_01970 4.5e-53
DMIJIMIF_01971 8.3e-122 S CAAX protease self-immunity
DMIJIMIF_01972 3.6e-194 S DUF218 domain
DMIJIMIF_01973 0.0 macB_3 V ABC transporter, ATP-binding protein
DMIJIMIF_01974 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DMIJIMIF_01975 4.4e-101 S ECF transporter, substrate-specific component
DMIJIMIF_01976 4.7e-202 tcsA S ABC transporter substrate-binding protein PnrA-like
DMIJIMIF_01977 1.5e-200 tcsA S ABC transporter substrate-binding protein PnrA-like
DMIJIMIF_01978 5.2e-284 xylG 3.6.3.17 S ABC transporter
DMIJIMIF_01979 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
DMIJIMIF_01980 9.8e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
DMIJIMIF_01981 2.2e-159 yeaE S Aldo/keto reductase family
DMIJIMIF_01982 4.7e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DMIJIMIF_01983 6.3e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
DMIJIMIF_01984 3.1e-127 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
DMIJIMIF_01985 1.2e-71
DMIJIMIF_01986 8.3e-132 cof S haloacid dehalogenase-like hydrolase
DMIJIMIF_01987 2.2e-230 pbuG S permease
DMIJIMIF_01988 6e-93 K Helix-turn-helix XRE-family like proteins
DMIJIMIF_01989 2.2e-79 V ATPases associated with a variety of cellular activities
DMIJIMIF_01990 1.1e-148 S ABC-2 family transporter protein
DMIJIMIF_01991 7.8e-129 K helix_turn_helix, mercury resistance
DMIJIMIF_01992 3e-232 pbuG S permease
DMIJIMIF_01993 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
DMIJIMIF_01994 1.8e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
DMIJIMIF_01996 2e-36 ymfI 1.1.1.100, 1.3.1.28 S oxidoreductase activity
DMIJIMIF_01997 1.2e-33 K Transcriptional regulator
DMIJIMIF_01998 8.9e-60 K Transcriptional regulator
DMIJIMIF_01999 1.5e-225 S cog cog1373
DMIJIMIF_02000 2e-146 S haloacid dehalogenase-like hydrolase
DMIJIMIF_02001 1.9e-226 pbuG S permease
DMIJIMIF_02002 2.3e-27
DMIJIMIF_02003 3.3e-56 K Helix-turn-helix domain
DMIJIMIF_02004 1.5e-71 S Putative adhesin
DMIJIMIF_02005 5.1e-75 atkY K Penicillinase repressor
DMIJIMIF_02006 3.1e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DMIJIMIF_02007 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DMIJIMIF_02008 0.0 copA 3.6.3.54 P P-type ATPase
DMIJIMIF_02009 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
DMIJIMIF_02010 1.2e-105
DMIJIMIF_02011 4.5e-247 EGP Sugar (and other) transporter
DMIJIMIF_02012 1.2e-18
DMIJIMIF_02013 3.3e-211
DMIJIMIF_02014 1.1e-82 L An automated process has identified a potential problem with this gene model
DMIJIMIF_02015 1.7e-42 rhaS6 K helix_turn_helix, arabinose operon control protein
DMIJIMIF_02016 5.3e-130 GK ROK family
DMIJIMIF_02017 3e-198 V MatE
DMIJIMIF_02018 3.3e-242 yisQ V MatE
DMIJIMIF_02019 4.1e-137 L An automated process has identified a potential problem with this gene model
DMIJIMIF_02020 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
DMIJIMIF_02021 1e-32 E Zn peptidase
DMIJIMIF_02022 1.9e-289 clcA P chloride
DMIJIMIF_02023 3.4e-274 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DMIJIMIF_02024 4.7e-31
DMIJIMIF_02025 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
DMIJIMIF_02026 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
DMIJIMIF_02027 3.1e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DMIJIMIF_02028 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DMIJIMIF_02029 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
DMIJIMIF_02030 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
DMIJIMIF_02031 1.6e-26 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DMIJIMIF_02034 6.1e-260 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
DMIJIMIF_02041 2.9e-13
DMIJIMIF_02042 2.1e-13
DMIJIMIF_02048 5.6e-23 relB L RelB antitoxin
DMIJIMIF_02063 4.4e-16 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DMIJIMIF_02064 1.4e-60 topB 5.99.1.2 L Bacterial DNA topoisomerase I DNA-binding domain
DMIJIMIF_02065 4.9e-50 xerD L Phage integrase, N-terminal SAM-like domain
DMIJIMIF_02071 2.6e-38 mltD CBM50 M NlpC/P60 family
DMIJIMIF_02072 5.5e-08
DMIJIMIF_02075 3.3e-256 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DMIJIMIF_02076 6.2e-121 U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DMIJIMIF_02079 7.1e-172 L transposase, IS605 OrfB family
DMIJIMIF_02080 3.2e-29
DMIJIMIF_02086 2.8e-87 L Integrase
DMIJIMIF_02087 1.3e-35 ftsH1 O AAA ATPase central domain protein
DMIJIMIF_02090 3.7e-25
DMIJIMIF_02091 1e-225 mod 2.1.1.72 L DNA methylase
DMIJIMIF_02092 0.0 res 3.1.21.5 L Type III restriction enzyme, res subunit
DMIJIMIF_02095 4.4e-88 UW LPXTG-motif cell wall anchor domain protein
DMIJIMIF_02096 3.2e-13 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DMIJIMIF_02097 1.7e-99 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
DMIJIMIF_02099 2.3e-157 KL domain protein
DMIJIMIF_02100 2e-25 sip M LysM domain protein
DMIJIMIF_02101 4e-126 xerS L Belongs to the 'phage' integrase family
DMIJIMIF_02104 1.8e-33 K peptidyl-tyrosine sulfation
DMIJIMIF_02105 1.7e-15
DMIJIMIF_02106 3.1e-36 S Protein of unknown function (DUF3990)
DMIJIMIF_02111 3.8e-178 L transposase, IS605 OrfB family
DMIJIMIF_02116 1.2e-18
DMIJIMIF_02117 1.8e-41 S Protein of unknown function (DUF3990)
DMIJIMIF_02118 3.6e-66
DMIJIMIF_02124 6.8e-235 L Transposase DDE domain
DMIJIMIF_02127 2.3e-96
DMIJIMIF_02128 2.7e-284 U Psort location Cytoplasmic, score
DMIJIMIF_02129 3.4e-112
DMIJIMIF_02136 3.7e-12
DMIJIMIF_02139 5.1e-33 radC L DNA repair protein
DMIJIMIF_02146 1.5e-17
DMIJIMIF_02150 7.5e-33 dnaG L DNA primase activity
DMIJIMIF_02151 3.7e-86 3.4.22.70 M sortase family
DMIJIMIF_02158 8.3e-74
DMIJIMIF_02160 1.2e-226 3.2.1.97 GH101 M Psort location Cellwall, score
DMIJIMIF_02161 1.9e-38 S SLAP domain
DMIJIMIF_02163 4.5e-121 G Peptidase_C39 like family
DMIJIMIF_02164 4.4e-176 M NlpC/P60 family
DMIJIMIF_02166 1.6e-17
DMIJIMIF_02169 5.4e-84 D CobQ CobB MinD ParA nucleotide binding domain protein
DMIJIMIF_02171 3.2e-90
DMIJIMIF_02174 2e-148 U TraM recognition site of TraD and TraG
DMIJIMIF_02179 6.3e-31 repA S Replication initiator protein A
DMIJIMIF_02181 3.8e-33
DMIJIMIF_02185 2.4e-53 M CHAP domain
DMIJIMIF_02187 8.1e-176 S regulation of response to stimulus
DMIJIMIF_02191 6.3e-50 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DMIJIMIF_02195 4.5e-69 L Initiator Replication protein
DMIJIMIF_02196 1e-175 L transposase, IS605 OrfB family
DMIJIMIF_02197 1.4e-84 endA F DNA RNA non-specific endonuclease
DMIJIMIF_02203 1.6e-13
DMIJIMIF_02204 2.8e-263 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)