ORF_ID e_value Gene_name EC_number CAZy COGs Description
LOPAFNIE_00001 4e-57 asp S Asp23 family, cell envelope-related function
LOPAFNIE_00002 2e-305 yloV S DAK2 domain fusion protein YloV
LOPAFNIE_00003 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LOPAFNIE_00004 1.5e-247 L Putative transposase DNA-binding domain
LOPAFNIE_00005 1.1e-115 L Resolvase, N-terminal
LOPAFNIE_00006 9.7e-59
LOPAFNIE_00007 0.0 lhr L DEAD DEAH box helicase
LOPAFNIE_00008 2e-252 P P-loop Domain of unknown function (DUF2791)
LOPAFNIE_00009 5.1e-139 S TerB-C domain
LOPAFNIE_00010 1.3e-171 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LOPAFNIE_00011 6.4e-122 casE S CRISPR_assoc
LOPAFNIE_00012 2.8e-131 casD S CRISPR-associated protein (Cas_Cas5)
LOPAFNIE_00013 1.9e-198 casC L CT1975-like protein
LOPAFNIE_00014 8.8e-110 casB S CRISPR-associated protein Cse2 (CRISPR_cse2)
LOPAFNIE_00015 2.9e-111 casA L the current gene model (or a revised gene model) may contain a frame shift
LOPAFNIE_00016 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LOPAFNIE_00017 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
LOPAFNIE_00018 4.1e-54 ftsL D Cell division protein FtsL
LOPAFNIE_00019 1.3e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LOPAFNIE_00020 6.3e-78 mraZ K Belongs to the MraZ family
LOPAFNIE_00021 3.5e-37 KQ helix_turn_helix, mercury resistance
LOPAFNIE_00022 1.4e-82 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LOPAFNIE_00024 6.5e-107 3.2.2.20 K acetyltransferase
LOPAFNIE_00025 3.9e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LOPAFNIE_00026 6.7e-178 D Alpha beta
LOPAFNIE_00027 9.4e-46
LOPAFNIE_00028 1.6e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
LOPAFNIE_00029 2.6e-206 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
LOPAFNIE_00030 2.3e-215 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
LOPAFNIE_00031 2e-103 S TPM domain
LOPAFNIE_00032 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
LOPAFNIE_00033 4e-167 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
LOPAFNIE_00034 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LOPAFNIE_00035 9.9e-85 yueI S Protein of unknown function (DUF1694)
LOPAFNIE_00036 2.3e-218 rarA L recombination factor protein RarA
LOPAFNIE_00037 2.4e-38
LOPAFNIE_00038 9.8e-77 usp6 T universal stress protein
LOPAFNIE_00039 4.6e-126 S zinc-ribbon domain
LOPAFNIE_00040 3.4e-129 S (CBS) domain
LOPAFNIE_00041 3.8e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LOPAFNIE_00042 1e-57 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LOPAFNIE_00043 2.9e-247 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LOPAFNIE_00044 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LOPAFNIE_00045 2.5e-39 rpmE2 J Ribosomal protein L31
LOPAFNIE_00046 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
LOPAFNIE_00047 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
LOPAFNIE_00048 7.8e-299 ybeC E amino acid
LOPAFNIE_00049 7.5e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LOPAFNIE_00050 2.9e-35
LOPAFNIE_00051 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
LOPAFNIE_00052 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LOPAFNIE_00053 2.8e-103 S Iron-sulfur cluster assembly protein
LOPAFNIE_00054 1.5e-230 XK27_04775 S PAS domain
LOPAFNIE_00055 4.4e-140 ypuA S Protein of unknown function (DUF1002)
LOPAFNIE_00056 9.7e-146 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LOPAFNIE_00057 1.6e-182 S Alpha/beta hydrolase of unknown function (DUF915)
LOPAFNIE_00058 9.3e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LOPAFNIE_00059 1.4e-44
LOPAFNIE_00060 4.5e-194 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LOPAFNIE_00061 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LOPAFNIE_00062 4.8e-45 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LOPAFNIE_00063 2.8e-66 V ABC-type multidrug transport system, ATPase and permease components
LOPAFNIE_00064 6.5e-207 V ABC-type multidrug transport system, ATPase and permease components
LOPAFNIE_00065 5.2e-279 V ABC-type multidrug transport system, ATPase and permease components
LOPAFNIE_00066 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
LOPAFNIE_00067 1.5e-177 I Carboxylesterase family
LOPAFNIE_00069 5.6e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
LOPAFNIE_00070 1.7e-129 manY G PTS system
LOPAFNIE_00071 1e-173 manN G system, mannose fructose sorbose family IID component
LOPAFNIE_00072 1.3e-63 manO S Domain of unknown function (DUF956)
LOPAFNIE_00073 6.7e-159 K Transcriptional regulator
LOPAFNIE_00074 5.1e-75 atkY K Penicillinase repressor
LOPAFNIE_00075 4e-59 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LOPAFNIE_00076 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LOPAFNIE_00077 0.0 copA 3.6.3.54 P P-type ATPase
LOPAFNIE_00078 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
LOPAFNIE_00079 1.2e-105
LOPAFNIE_00080 4.2e-141 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
LOPAFNIE_00082 1e-61 psiE S Phosphate-starvation-inducible E
LOPAFNIE_00083 3.8e-113 yncA 2.3.1.79 S Maltose acetyltransferase
LOPAFNIE_00084 1.5e-70 S Iron-sulphur cluster biosynthesis
LOPAFNIE_00086 2.3e-30
LOPAFNIE_00087 3.6e-173 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
LOPAFNIE_00088 6.2e-12
LOPAFNIE_00089 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
LOPAFNIE_00090 1.2e-169 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LOPAFNIE_00091 3.5e-62 yqhL P Rhodanese-like protein
LOPAFNIE_00092 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
LOPAFNIE_00093 2.4e-119 gluP 3.4.21.105 S Rhomboid family
LOPAFNIE_00094 2.1e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LOPAFNIE_00095 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LOPAFNIE_00096 9.8e-21 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LOPAFNIE_00097 2.7e-202 S SLAP domain
LOPAFNIE_00098 6.9e-38 S Protein of unknown function (DUF2922)
LOPAFNIE_00099 5.5e-30
LOPAFNIE_00101 4.8e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LOPAFNIE_00102 4.6e-123 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LOPAFNIE_00103 4e-62
LOPAFNIE_00104 2.1e-127 cof S haloacid dehalogenase-like hydrolase
LOPAFNIE_00105 2.2e-230 pbuG S permease
LOPAFNIE_00106 2.8e-288 ytgP S Polysaccharide biosynthesis protein
LOPAFNIE_00107 2.7e-137 lysA2 M Glycosyl hydrolases family 25
LOPAFNIE_00108 1.3e-133 S Protein of unknown function (DUF975)
LOPAFNIE_00109 7.6e-177 pbpX2 V Beta-lactamase
LOPAFNIE_00110 3.3e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LOPAFNIE_00111 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LOPAFNIE_00112 4.6e-238 dltB M MBOAT, membrane-bound O-acyltransferase family
LOPAFNIE_00113 2.2e-287 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LOPAFNIE_00114 5.2e-19 S D-Ala-teichoic acid biosynthesis protein
LOPAFNIE_00115 4.7e-48
LOPAFNIE_00116 1.5e-216 ywhK S Membrane
LOPAFNIE_00117 7.1e-152 I alpha/beta hydrolase fold
LOPAFNIE_00118 1.8e-110 yjbF S SNARE associated Golgi protein
LOPAFNIE_00119 7.5e-100 J Acetyltransferase (GNAT) domain
LOPAFNIE_00120 1.9e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LOPAFNIE_00121 3.5e-216 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LOPAFNIE_00122 0.0 G Belongs to the glycosyl hydrolase 31 family
LOPAFNIE_00123 1.6e-55 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LOPAFNIE_00124 1.4e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LOPAFNIE_00125 3.4e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LOPAFNIE_00126 1.3e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LOPAFNIE_00127 1.7e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LOPAFNIE_00128 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LOPAFNIE_00129 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
LOPAFNIE_00130 7.1e-158 rssA S Phospholipase, patatin family
LOPAFNIE_00131 7.5e-149 S hydrolase
LOPAFNIE_00132 9.6e-121 K response regulator
LOPAFNIE_00133 1.3e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
LOPAFNIE_00134 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LOPAFNIE_00135 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
LOPAFNIE_00136 1.6e-101 GM NmrA-like family
LOPAFNIE_00137 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LOPAFNIE_00138 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LOPAFNIE_00139 1.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LOPAFNIE_00140 3.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LOPAFNIE_00141 7.9e-42 M domain protein
LOPAFNIE_00143 3.2e-200 pbpX V Beta-lactamase
LOPAFNIE_00144 9e-256 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LOPAFNIE_00145 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
LOPAFNIE_00150 3.9e-98 UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_00151 2.5e-45 UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_00152 3.2e-52 UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_00153 7.7e-27 UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_00154 6.5e-190 UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_00155 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LOPAFNIE_00156 1.8e-147 tatD L hydrolase, TatD family
LOPAFNIE_00157 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LOPAFNIE_00158 3.9e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LOPAFNIE_00159 4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LOPAFNIE_00162 6.9e-158 xth 3.1.11.2 L exodeoxyribonuclease III
LOPAFNIE_00163 1.3e-273 E amino acid
LOPAFNIE_00164 0.0 L Helicase C-terminal domain protein
LOPAFNIE_00165 6.2e-205 pbpX1 V Beta-lactamase
LOPAFNIE_00166 4.6e-227 N Uncharacterized conserved protein (DUF2075)
LOPAFNIE_00167 1.2e-70 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LOPAFNIE_00168 3.8e-13 S Protein of unknown function (DUF805)
LOPAFNIE_00169 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LOPAFNIE_00170 2.2e-221 ecsB U ABC transporter
LOPAFNIE_00171 2e-135 ecsA V ABC transporter, ATP-binding protein
LOPAFNIE_00172 2.8e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
LOPAFNIE_00173 3.9e-25
LOPAFNIE_00174 4e-86 M ErfK YbiS YcfS YnhG
LOPAFNIE_00175 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LOPAFNIE_00176 6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
LOPAFNIE_00177 2.2e-96 3.6.1.55 L NUDIX domain
LOPAFNIE_00178 1e-95
LOPAFNIE_00179 2.7e-96 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LOPAFNIE_00180 3.2e-197 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
LOPAFNIE_00181 2.3e-59 hxlR K Transcriptional regulator, HxlR family
LOPAFNIE_00182 2.8e-98 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
LOPAFNIE_00183 3e-15 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
LOPAFNIE_00184 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LOPAFNIE_00185 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LOPAFNIE_00186 9e-26
LOPAFNIE_00187 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
LOPAFNIE_00188 3e-91 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
LOPAFNIE_00189 2.3e-156 yvgN C Aldo keto reductase
LOPAFNIE_00190 0.0 tetP J elongation factor G
LOPAFNIE_00191 8.7e-145 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
LOPAFNIE_00192 0.0 clpE O AAA domain (Cdc48 subfamily)
LOPAFNIE_00193 4.4e-166 S Alpha/beta hydrolase of unknown function (DUF915)
LOPAFNIE_00194 2.6e-46 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LOPAFNIE_00195 1.7e-232 L COG3547 Transposase and inactivated derivatives
LOPAFNIE_00196 9.6e-17 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
LOPAFNIE_00197 2e-146 S Putative ABC-transporter type IV
LOPAFNIE_00199 3e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LOPAFNIE_00200 1.3e-114
LOPAFNIE_00201 5e-159 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LOPAFNIE_00202 2.5e-220 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
LOPAFNIE_00203 1.9e-52
LOPAFNIE_00204 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
LOPAFNIE_00205 7.8e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LOPAFNIE_00206 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LOPAFNIE_00207 0.0 clpE O Belongs to the ClpA ClpB family
LOPAFNIE_00208 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
LOPAFNIE_00209 3.5e-31
LOPAFNIE_00210 7.3e-50 L Transposase
LOPAFNIE_00211 1.9e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LOPAFNIE_00212 3.1e-245 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LOPAFNIE_00213 1.2e-28 S Protein conserved in bacteria
LOPAFNIE_00214 3.9e-57
LOPAFNIE_00215 7.7e-88
LOPAFNIE_00216 1.1e-264 yheS_2 S ATPases associated with a variety of cellular activities
LOPAFNIE_00217 5.7e-95 XK27_05540 S DUF218 domain
LOPAFNIE_00218 1e-68 XK27_05540 S DUF218 domain
LOPAFNIE_00219 1.1e-110
LOPAFNIE_00220 2.5e-107
LOPAFNIE_00221 7.3e-83 yicL EG EamA-like transporter family
LOPAFNIE_00222 1.6e-166 EG EamA-like transporter family
LOPAFNIE_00223 3.2e-159 EG EamA-like transporter family
LOPAFNIE_00224 3.1e-192 oppD P Belongs to the ABC transporter superfamily
LOPAFNIE_00225 1.5e-170 oppF P Belongs to the ABC transporter superfamily
LOPAFNIE_00226 5.7e-172 oppB P ABC transporter permease
LOPAFNIE_00227 6.2e-131 oppC P Binding-protein-dependent transport system inner membrane component
LOPAFNIE_00228 7.4e-112
LOPAFNIE_00229 1.9e-278 S O-antigen ligase like membrane protein
LOPAFNIE_00230 2.3e-42
LOPAFNIE_00231 6.7e-93 gmk2 2.7.4.8 F Guanylate kinase homologues.
LOPAFNIE_00232 1.9e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
LOPAFNIE_00233 8.2e-168 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
LOPAFNIE_00234 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
LOPAFNIE_00235 1.1e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
LOPAFNIE_00236 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
LOPAFNIE_00237 1.9e-118 yvyE 3.4.13.9 S YigZ family
LOPAFNIE_00238 1.6e-246 comFA L Helicase C-terminal domain protein
LOPAFNIE_00239 0.0 3.6.3.8 P P-type ATPase
LOPAFNIE_00240 2.9e-125
LOPAFNIE_00241 2.8e-210 msmX P Belongs to the ABC transporter superfamily
LOPAFNIE_00242 5.2e-153 msmG P Binding-protein-dependent transport system inner membrane component
LOPAFNIE_00243 4e-156 msmF P Binding-protein-dependent transport system inner membrane component
LOPAFNIE_00244 1.5e-97 msmE G Bacterial extracellular solute-binding protein
LOPAFNIE_00245 4.2e-101 ybbL S ABC transporter, ATP-binding protein
LOPAFNIE_00246 1.9e-130 ybbM S Uncharacterised protein family (UPF0014)
LOPAFNIE_00247 2.3e-96 S Domain of unknown function (DUF4811)
LOPAFNIE_00248 3.2e-262 lmrB EGP Major facilitator Superfamily
LOPAFNIE_00249 8.5e-72 nqr 1.5.1.36 S NADPH-dependent FMN reductase
LOPAFNIE_00250 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
LOPAFNIE_00251 6e-151 3.1.3.48 T Tyrosine phosphatase family
LOPAFNIE_00252 2.8e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LOPAFNIE_00253 3e-53 cvpA S Colicin V production protein
LOPAFNIE_00254 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LOPAFNIE_00255 8.5e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LOPAFNIE_00256 1.3e-219 rny S Endoribonuclease that initiates mRNA decay
LOPAFNIE_00257 7.1e-219 prkC 2.7.11.1 KLT serine threonine protein kinase
LOPAFNIE_00258 1.8e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LOPAFNIE_00259 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
LOPAFNIE_00260 1.4e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
LOPAFNIE_00261 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LOPAFNIE_00262 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LOPAFNIE_00263 1.1e-77 6.3.3.2 S ASCH
LOPAFNIE_00264 1e-293 recN L May be involved in recombinational repair of damaged DNA
LOPAFNIE_00265 2.2e-148 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LOPAFNIE_00266 9.2e-153 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LOPAFNIE_00267 1.1e-34 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LOPAFNIE_00268 3.8e-185 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LOPAFNIE_00269 5e-143 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LOPAFNIE_00270 6.2e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LOPAFNIE_00271 1.3e-70 yqhY S Asp23 family, cell envelope-related function
LOPAFNIE_00272 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LOPAFNIE_00274 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
LOPAFNIE_00275 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
LOPAFNIE_00276 1.5e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LOPAFNIE_00277 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LOPAFNIE_00278 4.7e-171 whiA K May be required for sporulation
LOPAFNIE_00279 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
LOPAFNIE_00280 2.1e-120 rapZ S Displays ATPase and GTPase activities
LOPAFNIE_00281 1.6e-23 K response regulator
LOPAFNIE_00282 6.2e-222 sptS 2.7.13.3 T Histidine kinase
LOPAFNIE_00283 2.5e-209 EGP Major facilitator Superfamily
LOPAFNIE_00284 5e-69 O OsmC-like protein
LOPAFNIE_00285 7.7e-12
LOPAFNIE_00286 1.3e-22 3.6.4.12 S transposase or invertase
LOPAFNIE_00287 2.3e-228 slpX S SLAP domain
LOPAFNIE_00288 4.4e-144 K SIS domain
LOPAFNIE_00289 3.3e-92 2.7.11.1, 3.2.1.8 M energy transducer activity
LOPAFNIE_00290 7.7e-22
LOPAFNIE_00291 1.8e-62 L PFAM IS66 Orf2 family protein
LOPAFNIE_00292 2.6e-220 L Transposase IS66 family
LOPAFNIE_00293 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
LOPAFNIE_00294 6.4e-148 glvR K Helix-turn-helix domain, rpiR family
LOPAFNIE_00295 7e-81
LOPAFNIE_00296 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
LOPAFNIE_00297 3.9e-34 copZ C Heavy-metal-associated domain
LOPAFNIE_00298 2.9e-96 dps P Belongs to the Dps family
LOPAFNIE_00299 1.1e-138 stp 3.1.3.16 T phosphatase
LOPAFNIE_00300 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LOPAFNIE_00301 2.5e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LOPAFNIE_00302 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
LOPAFNIE_00303 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LOPAFNIE_00304 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LOPAFNIE_00305 2.2e-87 ypbG 2.7.1.2 GK ROK family
LOPAFNIE_00306 6.6e-278 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LOPAFNIE_00307 7.3e-135 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
LOPAFNIE_00308 2.6e-205 csaB M Glycosyl transferases group 1
LOPAFNIE_00309 3.5e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LOPAFNIE_00310 4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LOPAFNIE_00311 0.0 pacL 3.6.3.8 P P-type ATPase
LOPAFNIE_00312 2.7e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
LOPAFNIE_00313 5.4e-259 epsU S Polysaccharide biosynthesis protein
LOPAFNIE_00314 9.1e-135 M Glycosyltransferase sugar-binding region containing DXD motif
LOPAFNIE_00315 3.7e-120 S Putative esterase
LOPAFNIE_00316 4.1e-214 2.7.1.208, 2.7.1.211 G phosphotransferase system
LOPAFNIE_00317 3.4e-142 S Bacterial protein of unknown function (DUF871)
LOPAFNIE_00318 1.8e-22
LOPAFNIE_00319 3e-145 cbiQ P cobalt transport
LOPAFNIE_00320 0.0 ykoD P ABC transporter, ATP-binding protein
LOPAFNIE_00321 5.6e-95 S UPF0397 protein
LOPAFNIE_00322 2.1e-76 yybA 2.3.1.57 K Transcriptional regulator
LOPAFNIE_00323 3.7e-96 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
LOPAFNIE_00324 2.6e-101 S Peptidase propeptide and YPEB domain
LOPAFNIE_00325 2.9e-88 S Peptidase propeptide and YPEB domain
LOPAFNIE_00326 2.7e-160 T GHKL domain
LOPAFNIE_00327 0.0 rafA 3.2.1.22 G alpha-galactosidase
LOPAFNIE_00328 0.0 XK27_06780 V ABC transporter permease
LOPAFNIE_00329 1.2e-123 XK27_06785 V ABC transporter, ATP-binding protein
LOPAFNIE_00330 4.2e-150
LOPAFNIE_00332 4.1e-98 ydaM M Glycosyl transferase
LOPAFNIE_00333 1.1e-139 ydaM M Glycosyl transferase
LOPAFNIE_00334 2.7e-188 G Glycosyl hydrolases family 8
LOPAFNIE_00335 8.8e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
LOPAFNIE_00336 1.1e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LOPAFNIE_00337 1.5e-158 isdE P Periplasmic binding protein
LOPAFNIE_00338 1.5e-86 M Iron Transport-associated domain
LOPAFNIE_00339 4.3e-202 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
LOPAFNIE_00340 1.2e-210 S Bacterial protein of unknown function (DUF871)
LOPAFNIE_00342 5.6e-40 ybhL S Belongs to the BI1 family
LOPAFNIE_00343 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
LOPAFNIE_00344 0.0 asnB 6.3.5.4 E Asparagine synthase
LOPAFNIE_00345 1.8e-32 S ABC-2 family transporter protein
LOPAFNIE_00346 7.8e-129 K helix_turn_helix, mercury resistance
LOPAFNIE_00347 3e-232 pbuG S permease
LOPAFNIE_00348 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
LOPAFNIE_00349 1.5e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
LOPAFNIE_00350 3.6e-266
LOPAFNIE_00351 1.7e-187 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
LOPAFNIE_00352 0.0 L AAA domain
LOPAFNIE_00353 2.8e-232 yhaO L Ser Thr phosphatase family protein
LOPAFNIE_00354 7.2e-56 yheA S Belongs to the UPF0342 family
LOPAFNIE_00355 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LOPAFNIE_00356 2.3e-297 treB G phosphotransferase system
LOPAFNIE_00357 2.8e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LOPAFNIE_00358 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
LOPAFNIE_00359 8.1e-120 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LOPAFNIE_00360 6.3e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
LOPAFNIE_00361 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
LOPAFNIE_00362 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LOPAFNIE_00363 4.8e-96 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LOPAFNIE_00364 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
LOPAFNIE_00365 1.6e-71 yqeY S YqeY-like protein
LOPAFNIE_00366 0.0 uvrA3 L excinuclease ABC, A subunit
LOPAFNIE_00367 1.9e-21 C Flavodoxin
LOPAFNIE_00368 2.2e-47 C Flavodoxin
LOPAFNIE_00369 2e-211 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
LOPAFNIE_00370 1.2e-180 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
LOPAFNIE_00371 1.6e-114 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
LOPAFNIE_00372 1.7e-262 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LOPAFNIE_00373 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LOPAFNIE_00374 1e-133 cobB K SIR2 family
LOPAFNIE_00375 2.7e-88 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
LOPAFNIE_00376 9.6e-125 terC P Integral membrane protein TerC family
LOPAFNIE_00377 7.5e-64 yeaO S Protein of unknown function, DUF488
LOPAFNIE_00378 2.4e-115 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
LOPAFNIE_00379 4.1e-276 arlS 2.7.13.3 T Histidine kinase
LOPAFNIE_00380 4.6e-126 K response regulator
LOPAFNIE_00381 7.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
LOPAFNIE_00382 2.3e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LOPAFNIE_00383 6.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LOPAFNIE_00384 3.3e-147 malG P ABC transporter permease
LOPAFNIE_00385 3.3e-250 malF P Binding-protein-dependent transport system inner membrane component
LOPAFNIE_00386 4e-210 malE G Bacterial extracellular solute-binding protein
LOPAFNIE_00387 9.5e-211 msmX P Belongs to the ABC transporter superfamily
LOPAFNIE_00388 1.2e-115 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
LOPAFNIE_00389 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
LOPAFNIE_00390 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
LOPAFNIE_00391 8e-108 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
LOPAFNIE_00392 0.0 S membrane
LOPAFNIE_00393 7.7e-70 vicX 3.1.26.11 S domain protein
LOPAFNIE_00394 4e-53 vicX 3.1.26.11 S domain protein
LOPAFNIE_00395 2.9e-148 yycI S YycH protein
LOPAFNIE_00396 5.7e-208 yycH S YycH protein
LOPAFNIE_00397 2.1e-19 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LOPAFNIE_00398 4.7e-109 glnP P ABC transporter permease
LOPAFNIE_00399 9.7e-91 gluC P ABC transporter permease
LOPAFNIE_00400 1.5e-149 glnH ET ABC transporter substrate-binding protein
LOPAFNIE_00401 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LOPAFNIE_00402 1.5e-211 M Glycosyl hydrolases family 25
LOPAFNIE_00403 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
LOPAFNIE_00404 1.6e-66
LOPAFNIE_00405 1.3e-97 S Protein of unknown function (DUF2974)
LOPAFNIE_00406 4.6e-114 L Resolvase, N-terminal
LOPAFNIE_00407 1.2e-257 L Putative transposase DNA-binding domain
LOPAFNIE_00408 2.3e-167 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LOPAFNIE_00409 1e-162 yihY S Belongs to the UPF0761 family
LOPAFNIE_00410 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
LOPAFNIE_00411 3.5e-73 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LOPAFNIE_00412 2.1e-39
LOPAFNIE_00413 2.3e-119 C nitroreductase
LOPAFNIE_00414 7.9e-219 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LOPAFNIE_00415 3.5e-261 qacA EGP Major facilitator Superfamily
LOPAFNIE_00416 1.3e-108 dnaX 2.4.99.16, 2.7.7.7 GH13 M domain protein
LOPAFNIE_00417 4.5e-95 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LOPAFNIE_00418 1.3e-165 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LOPAFNIE_00419 2.9e-178 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
LOPAFNIE_00420 0.0 uup S ABC transporter, ATP-binding protein
LOPAFNIE_00421 6.6e-262 frdC 1.3.5.4 C FAD binding domain
LOPAFNIE_00422 7.6e-266 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
LOPAFNIE_00423 3.3e-106 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
LOPAFNIE_00424 7e-80 K Acetyltransferase (GNAT) domain
LOPAFNIE_00425 2.1e-149 M Belongs to the glycosyl hydrolase 28 family
LOPAFNIE_00426 4.7e-54 sdaAB 4.3.1.17 E Serine dehydratase beta chain
LOPAFNIE_00427 1.7e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
LOPAFNIE_00428 3.3e-52 S Iron-sulfur cluster assembly protein
LOPAFNIE_00429 6.4e-108 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
LOPAFNIE_00430 6.3e-16 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
LOPAFNIE_00431 4.2e-24 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
LOPAFNIE_00432 6.9e-156 cinI S Serine hydrolase (FSH1)
LOPAFNIE_00433 7.1e-301 S Predicted membrane protein (DUF2207)
LOPAFNIE_00434 7.3e-136 K LytTr DNA-binding domain
LOPAFNIE_00435 1.1e-141 2.7.13.3 T GHKL domain
LOPAFNIE_00436 1.2e-225 pbuG S permease
LOPAFNIE_00437 3.9e-147 S haloacid dehalogenase-like hydrolase
LOPAFNIE_00438 8.5e-40 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
LOPAFNIE_00439 3.2e-88 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
LOPAFNIE_00440 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
LOPAFNIE_00441 6.9e-122 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LOPAFNIE_00442 1.1e-54 dhaM 2.7.1.121 S PTS system fructose IIA component
LOPAFNIE_00443 1.5e-93 dhaL 2.7.1.121 S Dak2
LOPAFNIE_00444 1.3e-174 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
LOPAFNIE_00445 5e-145 S Bacterial protein of unknown function (DUF871)
LOPAFNIE_00446 7.5e-169 yfeW 3.4.16.4 V Beta-lactamase
LOPAFNIE_00447 1.2e-113 K UTRA
LOPAFNIE_00448 3.8e-163 S Oxidoreductase family, NAD-binding Rossmann fold
LOPAFNIE_00449 6e-126 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LOPAFNIE_00450 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
LOPAFNIE_00451 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LOPAFNIE_00452 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
LOPAFNIE_00453 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LOPAFNIE_00454 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LOPAFNIE_00455 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LOPAFNIE_00456 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LOPAFNIE_00457 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LOPAFNIE_00458 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LOPAFNIE_00459 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
LOPAFNIE_00460 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LOPAFNIE_00461 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LOPAFNIE_00462 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LOPAFNIE_00463 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LOPAFNIE_00464 6.8e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LOPAFNIE_00465 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LOPAFNIE_00466 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LOPAFNIE_00467 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LOPAFNIE_00468 9.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LOPAFNIE_00469 2.3e-24 rpmD J Ribosomal protein L30
LOPAFNIE_00470 2.6e-71 rplO J Binds to the 23S rRNA
LOPAFNIE_00471 2.5e-211
LOPAFNIE_00472 5.4e-137 S SLAP domain
LOPAFNIE_00473 3.7e-285 clcA P chloride
LOPAFNIE_00474 6.2e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LOPAFNIE_00475 1.1e-93
LOPAFNIE_00476 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
LOPAFNIE_00477 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LOPAFNIE_00478 1.8e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LOPAFNIE_00479 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LOPAFNIE_00480 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LOPAFNIE_00481 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
LOPAFNIE_00482 5.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LOPAFNIE_00483 1.2e-184 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LOPAFNIE_00484 2.6e-35 yaaA S S4 domain protein YaaA
LOPAFNIE_00485 6.2e-210 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LOPAFNIE_00486 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LOPAFNIE_00487 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LOPAFNIE_00488 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
LOPAFNIE_00489 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LOPAFNIE_00490 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LOPAFNIE_00491 2.3e-89 E Zn peptidase
LOPAFNIE_00492 5.1e-41 ps115 K Helix-turn-helix XRE-family like proteins
LOPAFNIE_00493 3.2e-42
LOPAFNIE_00494 1.9e-170 S Bacteriocin helveticin-J
LOPAFNIE_00495 2.7e-154 S hydrolase
LOPAFNIE_00496 9.8e-132 ydhQ K UbiC transcription regulator-associated domain protein
LOPAFNIE_00497 2.8e-176 rihB 3.2.2.1 F Nucleoside
LOPAFNIE_00498 1.2e-80 3.5.1.28 UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_00499 1.4e-209 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LOPAFNIE_00500 1.1e-178 yrvN L AAA C-terminal domain
LOPAFNIE_00501 3.1e-220 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LOPAFNIE_00502 4.4e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
LOPAFNIE_00503 4e-159 trsE S COG0433 Predicted ATPase
LOPAFNIE_00504 3.8e-15
LOPAFNIE_00505 3.5e-36 2.7.1.191 G PTS system fructose IIA component
LOPAFNIE_00506 6.2e-42
LOPAFNIE_00507 7.7e-09
LOPAFNIE_00508 4.2e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
LOPAFNIE_00509 1.8e-136 glvR K Helix-turn-helix domain, rpiR family
LOPAFNIE_00510 5.6e-74 UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_00512 3.4e-37 yjcE P NhaP-type Na H and K H
LOPAFNIE_00513 7.1e-36 yozE S Belongs to the UPF0346 family
LOPAFNIE_00514 2e-144 DegV S Uncharacterised protein, DegV family COG1307
LOPAFNIE_00515 4.9e-149 psaA P Belongs to the bacterial solute-binding protein 9 family
LOPAFNIE_00516 1.6e-117 fhuC P ABC transporter
LOPAFNIE_00517 5e-129 znuB U ABC 3 transport family
LOPAFNIE_00518 3.5e-73 hsp O Belongs to the small heat shock protein (HSP20) family
LOPAFNIE_00519 7.5e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LOPAFNIE_00520 1.2e-112
LOPAFNIE_00522 4.6e-111 E Belongs to the SOS response-associated peptidase family
LOPAFNIE_00523 1.4e-150 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
LOPAFNIE_00524 2.3e-116 dedA S SNARE-like domain protein
LOPAFNIE_00525 3.7e-100 S Protein of unknown function (DUF1461)
LOPAFNIE_00526 1.5e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LOPAFNIE_00527 1.7e-105 yutD S Protein of unknown function (DUF1027)
LOPAFNIE_00528 1.2e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
LOPAFNIE_00529 4.3e-55
LOPAFNIE_00530 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LOPAFNIE_00531 1.9e-181 ccpA K catabolite control protein A
LOPAFNIE_00532 9.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LOPAFNIE_00533 1.3e-36
LOPAFNIE_00534 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LOPAFNIE_00535 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LOPAFNIE_00536 9.3e-66 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LOPAFNIE_00538 4.6e-188 3.2.1.18 GH33 M Rib/alpha-like repeat
LOPAFNIE_00539 5.2e-281 thrC 4.2.3.1 E Threonine synthase
LOPAFNIE_00540 1.6e-268 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
LOPAFNIE_00541 6.5e-44
LOPAFNIE_00542 6.1e-171 2.7.1.2 GK ROK family
LOPAFNIE_00543 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
LOPAFNIE_00544 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
LOPAFNIE_00545 2.7e-31 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
LOPAFNIE_00546 2.4e-10 L Psort location Cytoplasmic, score
LOPAFNIE_00547 5.8e-13 L Transposase and inactivated derivatives, IS30 family
LOPAFNIE_00548 1.3e-64 L Transposase and inactivated derivatives, IS30 family
LOPAFNIE_00549 9.7e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LOPAFNIE_00550 1.8e-215 iscS2 2.8.1.7 E Aminotransferase class V
LOPAFNIE_00551 1.9e-238 lacS G Transporter
LOPAFNIE_00552 5.4e-243 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LOPAFNIE_00553 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LOPAFNIE_00554 7.5e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
LOPAFNIE_00555 9.6e-136 cdsA 2.7.7.41 I Belongs to the CDS family
LOPAFNIE_00556 1.6e-137 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LOPAFNIE_00557 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LOPAFNIE_00558 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LOPAFNIE_00559 1.6e-183 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LOPAFNIE_00560 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
LOPAFNIE_00561 3.1e-192 yabB 2.1.1.223 L Methyltransferase small domain
LOPAFNIE_00562 9.5e-126 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
LOPAFNIE_00563 1.3e-87 K GNAT family
LOPAFNIE_00564 8.4e-204 XK27_00915 C Luciferase-like monooxygenase
LOPAFNIE_00565 1.2e-134 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
LOPAFNIE_00566 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LOPAFNIE_00567 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
LOPAFNIE_00568 3.6e-42 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
LOPAFNIE_00569 6.1e-95 K Transcriptional regulator
LOPAFNIE_00570 6.1e-61 K Transcriptional regulator
LOPAFNIE_00571 1e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
LOPAFNIE_00572 2.2e-172 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LOPAFNIE_00573 3.6e-194 pbpX1 V Beta-lactamase
LOPAFNIE_00574 1.8e-251 I Protein of unknown function (DUF2974)
LOPAFNIE_00575 1.2e-17
LOPAFNIE_00576 3.2e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
LOPAFNIE_00577 2.7e-70 S Iron-sulphur cluster biosynthesis
LOPAFNIE_00579 3.3e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LOPAFNIE_00580 8.1e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LOPAFNIE_00581 2.4e-248 yifK E Amino acid permease
LOPAFNIE_00582 4.9e-135 S PFAM Archaeal ATPase
LOPAFNIE_00583 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
LOPAFNIE_00584 1.6e-157 metQ1 P Belongs to the nlpA lipoprotein family
LOPAFNIE_00585 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
LOPAFNIE_00586 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LOPAFNIE_00587 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LOPAFNIE_00588 2.7e-199 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LOPAFNIE_00589 2.9e-162 cjaA ET ABC transporter substrate-binding protein
LOPAFNIE_00590 3.9e-114 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LOPAFNIE_00591 2.8e-117 P ABC transporter permease
LOPAFNIE_00592 5.1e-111 papP P ABC transporter, permease protein
LOPAFNIE_00593 0.0 snf 2.7.11.1 KL domain protein
LOPAFNIE_00594 6.5e-32 snf 2.7.11.1 KL domain protein
LOPAFNIE_00595 5.6e-256 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
LOPAFNIE_00596 1.3e-140 glf 5.4.99.9 M UDP-galactopyranose mutase
LOPAFNIE_00597 7.8e-21 I mechanosensitive ion channel activity
LOPAFNIE_00598 9.3e-183 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
LOPAFNIE_00599 1.6e-271 L Nuclease-related domain
LOPAFNIE_00600 3.8e-75 S Protein of unknown function (DUF3021)
LOPAFNIE_00601 7.8e-76 K LytTr DNA-binding domain
LOPAFNIE_00602 3.5e-91
LOPAFNIE_00603 1.2e-111 xerS L Belongs to the 'phage' integrase family
LOPAFNIE_00604 5.1e-260 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LOPAFNIE_00605 1.5e-49 L PLD-like domain
LOPAFNIE_00606 0.0 L PLD-like domain
LOPAFNIE_00607 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LOPAFNIE_00608 2.9e-238 pyrP F Permease
LOPAFNIE_00609 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LOPAFNIE_00611 2.5e-133 mdlA V ABC transporter
LOPAFNIE_00612 2.7e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
LOPAFNIE_00613 5e-148 noc K Belongs to the ParB family
LOPAFNIE_00614 3.4e-138 soj D Sporulation initiation inhibitor
LOPAFNIE_00615 3.8e-154 spo0J K Belongs to the ParB family
LOPAFNIE_00616 6.2e-44 yyzM S Bacterial protein of unknown function (DUF951)
LOPAFNIE_00617 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LOPAFNIE_00618 4.6e-135 XK27_01040 S Protein of unknown function (DUF1129)
LOPAFNIE_00619 8.7e-304 V ABC transporter, ATP-binding protein
LOPAFNIE_00620 0.0 V ABC transporter
LOPAFNIE_00622 3.6e-257
LOPAFNIE_00623 2.2e-78
LOPAFNIE_00624 1.1e-21 yjeM E Amino Acid
LOPAFNIE_00625 1.3e-88 yjeM E Amino acid permease
LOPAFNIE_00626 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LOPAFNIE_00627 4.8e-296 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LOPAFNIE_00628 3.2e-56 yagE E amino acid
LOPAFNIE_00629 4.2e-272 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
LOPAFNIE_00630 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
LOPAFNIE_00631 8.3e-106 S Repeat protein
LOPAFNIE_00632 6.9e-176 mreB D cell shape determining protein MreB
LOPAFNIE_00633 2.3e-108 radC L DNA repair protein
LOPAFNIE_00634 9.1e-118 S Haloacid dehalogenase-like hydrolase
LOPAFNIE_00635 6.8e-245 ycaM E amino acid
LOPAFNIE_00636 9.6e-141 S Cysteine-rich secretory protein family
LOPAFNIE_00637 7.3e-245 brnQ U Component of the transport system for branched-chain amino acids
LOPAFNIE_00638 2.8e-55 L Plasmid pRiA4b ORF-3-like protein
LOPAFNIE_00639 1.3e-43 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
LOPAFNIE_00640 2.2e-207 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
LOPAFNIE_00641 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
LOPAFNIE_00642 3.4e-158 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LOPAFNIE_00643 3e-60 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LOPAFNIE_00644 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LOPAFNIE_00645 3.2e-47 rplGA J ribosomal protein
LOPAFNIE_00646 8.8e-47 ylxR K Protein of unknown function (DUF448)
LOPAFNIE_00647 2.6e-198 nusA K Participates in both transcription termination and antitermination
LOPAFNIE_00648 2.7e-82 rimP J Required for maturation of 30S ribosomal subunits
LOPAFNIE_00649 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LOPAFNIE_00650 8.9e-92 cylB V ABC-2 type transporter
LOPAFNIE_00651 1.8e-116 cylA V ABC transporter
LOPAFNIE_00652 9e-33 K MerR HTH family regulatory protein
LOPAFNIE_00653 9.8e-48 arcA 3.5.3.6 E Arginine
LOPAFNIE_00654 6.3e-63 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LOPAFNIE_00655 1.6e-107 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
LOPAFNIE_00656 2e-97 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
LOPAFNIE_00657 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LOPAFNIE_00658 2e-146 E GDSL-like Lipase/Acylhydrolase family
LOPAFNIE_00659 4.9e-122 ung2 3.2.2.27 L Uracil-DNA glycosylase
LOPAFNIE_00660 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LOPAFNIE_00661 1.5e-189 cggR K Putative sugar-binding domain
LOPAFNIE_00664 1.6e-118 blpT
LOPAFNIE_00665 1.6e-112
LOPAFNIE_00666 3.9e-135 3.4.24.25, 3.4.24.26 UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_00667 2.1e-38 acfD M Membrane
LOPAFNIE_00668 5.7e-103 S response to antibiotic
LOPAFNIE_00669 8.9e-16 srtA 3.4.22.70 M sortase family
LOPAFNIE_00670 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LOPAFNIE_00671 4.9e-99 G Aldose 1-epimerase
LOPAFNIE_00672 8.4e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LOPAFNIE_00673 3.9e-115
LOPAFNIE_00674 4.1e-131
LOPAFNIE_00675 1e-160 S Oxidoreductase family, NAD-binding Rossmann fold
LOPAFNIE_00676 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LOPAFNIE_00677 0.0 yjbQ P TrkA C-terminal domain protein
LOPAFNIE_00678 7.2e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
LOPAFNIE_00679 2.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LOPAFNIE_00680 4.7e-274 P Sodium:sulfate symporter transmembrane region
LOPAFNIE_00681 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
LOPAFNIE_00682 9.1e-147 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LOPAFNIE_00683 3e-75 yfnA E Amino Acid
LOPAFNIE_00684 3.1e-151 yfnA E Amino Acid
LOPAFNIE_00685 4.6e-48 E Pfam:DUF955
LOPAFNIE_00687 1.4e-66 yslB S Protein of unknown function (DUF2507)
LOPAFNIE_00688 1e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LOPAFNIE_00689 1.1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LOPAFNIE_00690 8.4e-72 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
LOPAFNIE_00691 2.9e-133 EGP Major facilitator Superfamily
LOPAFNIE_00692 0.0 pepF E oligoendopeptidase F
LOPAFNIE_00694 1.6e-82 M NlpC/P60 family
LOPAFNIE_00695 2.4e-132 cobQ S glutamine amidotransferase
LOPAFNIE_00697 1.8e-66 L RelB antitoxin
LOPAFNIE_00698 1.5e-91 F Nucleoside 2-deoxyribosyltransferase
LOPAFNIE_00699 1.9e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
LOPAFNIE_00700 1.4e-145 yfeO P Voltage gated chloride channel
LOPAFNIE_00701 8.9e-184 5.3.3.2 C FMN-dependent dehydrogenase
LOPAFNIE_00702 0.0 pepO 3.4.24.71 O Peptidase family M13
LOPAFNIE_00703 1.4e-133 IQ Enoyl-(Acyl carrier protein) reductase
LOPAFNIE_00704 3.9e-237 S Peptidase M16
LOPAFNIE_00705 5.9e-222 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
LOPAFNIE_00706 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
LOPAFNIE_00707 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
LOPAFNIE_00708 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LOPAFNIE_00709 2.6e-214 yubA S AI-2E family transporter
LOPAFNIE_00710 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
LOPAFNIE_00711 7.3e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
LOPAFNIE_00712 1.1e-112 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LOPAFNIE_00713 4.4e-56 K Helix-turn-helix domain
LOPAFNIE_00714 4.1e-80 fld C Flavodoxin
LOPAFNIE_00715 3.1e-87 gtcA S Teichoic acid glycosylation protein
LOPAFNIE_00716 1.1e-203 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LOPAFNIE_00717 5.9e-149 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
LOPAFNIE_00718 1.1e-231 ndh 1.6.99.3 C NADH dehydrogenase
LOPAFNIE_00719 1.1e-118 clcA P chloride
LOPAFNIE_00720 1.6e-60 clcA P chloride
LOPAFNIE_00721 3.5e-33 K FCD
LOPAFNIE_00722 5.5e-14 K FCD
LOPAFNIE_00723 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
LOPAFNIE_00724 1.8e-150 S Sucrose-6F-phosphate phosphohydrolase
LOPAFNIE_00725 7.4e-121 S Protein of unknown function (DUF554)
LOPAFNIE_00726 7.1e-199 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LOPAFNIE_00727 2.5e-68
LOPAFNIE_00728 4.4e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LOPAFNIE_00729 8.9e-30 nrdI F NrdI Flavodoxin like
LOPAFNIE_00730 6.9e-57 yvoA_1 K Transcriptional regulator, GntR family
LOPAFNIE_00731 2.4e-122 skfE V ATPases associated with a variety of cellular activities
LOPAFNIE_00732 6.2e-122
LOPAFNIE_00733 3.3e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LOPAFNIE_00734 7.6e-216 2.1.1.14 E methionine synthase, vitamin-B12 independent
LOPAFNIE_00735 1.2e-146 I alpha/beta hydrolase fold
LOPAFNIE_00736 8.4e-129 yibF S overlaps another CDS with the same product name
LOPAFNIE_00737 4.1e-201 yibE S overlaps another CDS with the same product name
LOPAFNIE_00738 3.6e-113
LOPAFNIE_00739 1.8e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LOPAFNIE_00740 5.8e-225 S Cysteine-rich secretory protein family
LOPAFNIE_00741 3.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LOPAFNIE_00742 1.3e-258 glnPH2 P ABC transporter permease
LOPAFNIE_00743 6e-38 L Transposase and inactivated derivatives, IS30 family
LOPAFNIE_00744 1.4e-62
LOPAFNIE_00745 2.2e-259 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
LOPAFNIE_00746 3.6e-08
LOPAFNIE_00747 4.4e-68
LOPAFNIE_00748 4.8e-25
LOPAFNIE_00749 8.2e-31 yozG K Transcriptional regulator
LOPAFNIE_00750 2.5e-79
LOPAFNIE_00751 2.7e-159 lctP C L-lactate permease
LOPAFNIE_00752 4.3e-103 L Integrase
LOPAFNIE_00753 8.7e-154 L Transposase
LOPAFNIE_00754 1.2e-57 L Transposase
LOPAFNIE_00755 3.1e-127 oppA E ABC transporter
LOPAFNIE_00756 1.8e-231 Q Imidazolonepropionase and related amidohydrolases
LOPAFNIE_00757 4.5e-73 K UTRA domain
LOPAFNIE_00758 2e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LOPAFNIE_00759 8.8e-106 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
LOPAFNIE_00761 1.5e-83
LOPAFNIE_00762 3.4e-274 S Calcineurin-like phosphoesterase
LOPAFNIE_00763 5.5e-53
LOPAFNIE_00764 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LOPAFNIE_00765 1.4e-156 ycsE S Sucrose-6F-phosphate phosphohydrolase
LOPAFNIE_00766 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LOPAFNIE_00767 3.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LOPAFNIE_00768 1.4e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
LOPAFNIE_00769 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
LOPAFNIE_00770 1.8e-164 murB 1.3.1.98 M Cell wall formation
LOPAFNIE_00771 4.1e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LOPAFNIE_00772 5.4e-131 potB P ABC transporter permease
LOPAFNIE_00773 2.1e-127 potC P ABC transporter permease
LOPAFNIE_00774 2.3e-206 potD P ABC transporter
LOPAFNIE_00775 8.5e-41 ptsH G phosphocarrier protein HPR
LOPAFNIE_00776 3.4e-79 L Helix-turn-helix domain
LOPAFNIE_00777 1.4e-51 L Helix-turn-helix domain
LOPAFNIE_00778 6.4e-22 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
LOPAFNIE_00779 8.2e-79 V ATPases associated with a variety of cellular activities
LOPAFNIE_00780 1.4e-59 K Helix-turn-helix XRE-family like proteins
LOPAFNIE_00781 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
LOPAFNIE_00782 3.9e-307 oppA E ABC transporter substrate-binding protein
LOPAFNIE_00783 4.3e-68
LOPAFNIE_00785 8.6e-179 S CAAX protease self-immunity
LOPAFNIE_00786 4.9e-48
LOPAFNIE_00787 3.5e-276 pipD E Dipeptidase
LOPAFNIE_00788 1.8e-79
LOPAFNIE_00789 2.4e-116
LOPAFNIE_00791 6.8e-216 ydaM M Glycosyl transferase
LOPAFNIE_00792 6.2e-178 G Glycosyl hydrolases family 8
LOPAFNIE_00793 1.4e-121 yfbR S HD containing hydrolase-like enzyme
LOPAFNIE_00794 3.2e-158 L HNH nucleases
LOPAFNIE_00795 1.2e-137 S Protein of unknown function (DUF805)
LOPAFNIE_00796 1.2e-135 glnQ E ABC transporter, ATP-binding protein
LOPAFNIE_00797 1.8e-290 glnP P ABC transporter permease
LOPAFNIE_00798 7.7e-129 T Transcriptional regulatory protein, C terminal
LOPAFNIE_00799 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
LOPAFNIE_00800 5.1e-274 V ABC transporter transmembrane region
LOPAFNIE_00801 4.6e-129 S PAS domain
LOPAFNIE_00802 3e-13
LOPAFNIE_00803 9e-141 pnuC H nicotinamide mononucleotide transporter
LOPAFNIE_00804 1.1e-72 S Protein of unknown function (DUF3290)
LOPAFNIE_00805 3e-116 yviA S Protein of unknown function (DUF421)
LOPAFNIE_00806 2e-157 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LOPAFNIE_00807 3.2e-183 dnaQ 2.7.7.7 L EXOIII
LOPAFNIE_00808 1.9e-158 endA F DNA RNA non-specific endonuclease
LOPAFNIE_00809 7e-283 pipD E Dipeptidase
LOPAFNIE_00810 1.9e-203 malK P ATPases associated with a variety of cellular activities
LOPAFNIE_00811 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
LOPAFNIE_00812 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
LOPAFNIE_00813 3.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
LOPAFNIE_00814 2.5e-239 G Bacterial extracellular solute-binding protein
LOPAFNIE_00815 5.2e-154 corA P CorA-like Mg2+ transporter protein
LOPAFNIE_00816 8.8e-149 3.5.2.6 V Beta-lactamase enzyme family
LOPAFNIE_00817 6.6e-99 yobS K Bacterial regulatory proteins, tetR family
LOPAFNIE_00818 0.0 ydgH S MMPL family
LOPAFNIE_00825 4.6e-32 ykzG S Belongs to the UPF0356 family
LOPAFNIE_00826 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LOPAFNIE_00827 6.7e-241 S Domain of unknown function (DUF4838)
LOPAFNIE_00831 2.3e-210 S CAAX protease self-immunity
LOPAFNIE_00832 5.1e-145 S Replication initiation factor
LOPAFNIE_00833 3.3e-141 D Ftsk spoiiie family protein
LOPAFNIE_00835 8e-136 S PFAM Archaeal ATPase
LOPAFNIE_00836 6.3e-154 I transferase activity, transferring acyl groups other than amino-acyl groups
LOPAFNIE_00837 5.3e-291 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LOPAFNIE_00838 2e-205 S ABC transporter
LOPAFNIE_00839 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LOPAFNIE_00840 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LOPAFNIE_00841 5.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LOPAFNIE_00842 5.1e-17
LOPAFNIE_00843 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LOPAFNIE_00844 4.9e-159 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LOPAFNIE_00845 3.9e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
LOPAFNIE_00846 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LOPAFNIE_00847 4.9e-226 4.2.1.53 S Myosin-crossreactive antigen
LOPAFNIE_00848 1.4e-207 V ABC transporter transmembrane region
LOPAFNIE_00849 1.2e-35 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LOPAFNIE_00850 4e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
LOPAFNIE_00851 0.0 mco Q Multicopper oxidase
LOPAFNIE_00852 5.7e-25
LOPAFNIE_00853 9.8e-291
LOPAFNIE_00855 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
LOPAFNIE_00856 6.4e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
LOPAFNIE_00857 1.5e-112 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LOPAFNIE_00858 1.3e-205 cycA E Amino acid permease
LOPAFNIE_00859 1.1e-47 maa S transferase hexapeptide repeat
LOPAFNIE_00860 1.3e-16 maa S transferase hexapeptide repeat
LOPAFNIE_00861 2.4e-124 luxT K Bacterial regulatory proteins, tetR family
LOPAFNIE_00862 2.8e-135
LOPAFNIE_00863 5.1e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LOPAFNIE_00864 6.9e-290 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
LOPAFNIE_00865 1.1e-247 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LOPAFNIE_00866 6.5e-54 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LOPAFNIE_00867 2.7e-16 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LOPAFNIE_00868 8.9e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LOPAFNIE_00869 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LOPAFNIE_00870 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LOPAFNIE_00871 3.8e-218 aspC 2.6.1.1 E Aminotransferase
LOPAFNIE_00872 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LOPAFNIE_00874 8.4e-13 L PFAM IS66 Orf2 family protein
LOPAFNIE_00875 1.5e-16 S Transposase C of IS166 homeodomain
LOPAFNIE_00876 2.5e-178 mbl D Cell shape determining protein MreB Mrl
LOPAFNIE_00877 2e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
LOPAFNIE_00878 1.5e-33 S Protein of unknown function (DUF2969)
LOPAFNIE_00879 1.4e-119 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LOPAFNIE_00880 8.6e-70 ybbH_2 K Helix-turn-helix domain, rpiR family
LOPAFNIE_00881 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
LOPAFNIE_00882 3.8e-148 glnH ET ABC transporter
LOPAFNIE_00883 7.3e-256 V ABC-type multidrug transport system, ATPase and permease components
LOPAFNIE_00884 8.6e-33 M Peptidase family M23
LOPAFNIE_00887 3.4e-17 CO COG0526, thiol-disulfide isomerase and thioredoxins
LOPAFNIE_00893 3.4e-52 S COG0790 FOG TPR repeat, SEL1 subfamily
LOPAFNIE_00894 2.5e-38 L Protein of unknown function (DUF3991)
LOPAFNIE_00895 2.2e-273 S Archaea bacterial proteins of unknown function
LOPAFNIE_00896 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
LOPAFNIE_00897 4e-62 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
LOPAFNIE_00898 1.1e-219 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
LOPAFNIE_00899 1.4e-38 ynzC S UPF0291 protein
LOPAFNIE_00900 3.3e-30 yneF S Uncharacterised protein family (UPF0154)
LOPAFNIE_00901 7.1e-164 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
LOPAFNIE_00902 2.3e-285 oppA E ABC transporter substrate-binding protein
LOPAFNIE_00903 4.6e-154 S haloacid dehalogenase-like hydrolase
LOPAFNIE_00904 2.6e-52
LOPAFNIE_00905 1.9e-37
LOPAFNIE_00906 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
LOPAFNIE_00907 6.3e-159 S reductase
LOPAFNIE_00908 9.3e-35
LOPAFNIE_00909 3.4e-33 K Putative DNA-binding domain
LOPAFNIE_00910 2.2e-254 L Transposase IS66 family
LOPAFNIE_00911 2.6e-217 naiP EGP Major facilitator Superfamily
LOPAFNIE_00912 3.6e-277 S C4-dicarboxylate anaerobic carrier
LOPAFNIE_00913 9.3e-112
LOPAFNIE_00914 4.7e-57 1.14.99.57 S Antibiotic biosynthesis monooxygenase
LOPAFNIE_00915 1.6e-73 yjaB_1 K Acetyltransferase (GNAT) domain
LOPAFNIE_00916 1e-223 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
LOPAFNIE_00917 3.6e-82 plsC 2.3.1.51 I Acyltransferase
LOPAFNIE_00918 2.4e-76 hlyIII S protein, hemolysin III
LOPAFNIE_00919 3.1e-181 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LOPAFNIE_00920 1.6e-227 L COG3547 Transposase and inactivated derivatives
LOPAFNIE_00921 5.8e-288 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LOPAFNIE_00922 1.7e-143 V FtsX-like permease family
LOPAFNIE_00923 2.4e-133 cysA V ABC transporter, ATP-binding protein
LOPAFNIE_00924 1.7e-260 yfnA E amino acid
LOPAFNIE_00925 4.8e-64 lacI3 K helix_turn _helix lactose operon repressor
LOPAFNIE_00926 7.7e-251 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
LOPAFNIE_00927 2.5e-101 S Peptidase propeptide and YPEB domain
LOPAFNIE_00929 4.4e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LOPAFNIE_00930 2.1e-171 coaA 2.7.1.33 F Pantothenic acid kinase
LOPAFNIE_00931 2.7e-97 E GDSL-like Lipase/Acylhydrolase
LOPAFNIE_00932 1.2e-74 yjcF S Acetyltransferase (GNAT) domain
LOPAFNIE_00933 1.5e-144 aatB ET ABC transporter substrate-binding protein
LOPAFNIE_00934 7.1e-107 glnQ 3.6.3.21 E ABC transporter
LOPAFNIE_00935 8.5e-111 glnP P ABC transporter permease
LOPAFNIE_00936 0.0 helD 3.6.4.12 L DNA helicase
LOPAFNIE_00937 1.3e-49 arbZ I Phosphate acyltransferases
LOPAFNIE_00938 1.8e-86 arbZ I Phosphate acyltransferases
LOPAFNIE_00939 1.4e-36 S Cytochrome B5
LOPAFNIE_00940 7.8e-261 emrY EGP Major facilitator Superfamily
LOPAFNIE_00941 5e-246 V ABC-type multidrug transport system, ATPase and permease components
LOPAFNIE_00942 2.7e-77 K DNA-templated transcription, initiation
LOPAFNIE_00943 3e-26
LOPAFNIE_00944 9e-308 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LOPAFNIE_00945 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LOPAFNIE_00946 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LOPAFNIE_00947 4.9e-251 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
LOPAFNIE_00948 1.7e-241 npr 1.11.1.1 C NADH oxidase
LOPAFNIE_00951 1e-159 htpX O Belongs to the peptidase M48B family
LOPAFNIE_00952 3e-96 lemA S LemA family
LOPAFNIE_00953 8.9e-90 ymdB S Macro domain protein
LOPAFNIE_00954 1.3e-211 mdtG EGP Major facilitator Superfamily
LOPAFNIE_00955 5.1e-176
LOPAFNIE_00956 2.8e-47 lysM M LysM domain
LOPAFNIE_00957 0.0 pepN 3.4.11.2 E aminopeptidase
LOPAFNIE_00958 1.5e-248 dtpT U amino acid peptide transporter
LOPAFNIE_00959 1.2e-203 pbpX1 V Beta-lactamase
LOPAFNIE_00960 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
LOPAFNIE_00961 1.4e-126 pgm3 G Phosphoglycerate mutase family
LOPAFNIE_00962 8.2e-179 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LOPAFNIE_00964 2.7e-94 mreD
LOPAFNIE_00965 1.4e-133 mreC M Involved in formation and maintenance of cell shape
LOPAFNIE_00966 6.8e-120 glsA 3.5.1.2 E Belongs to the glutaminase family
LOPAFNIE_00967 2e-64
LOPAFNIE_00968 2.4e-47 S MazG-like family
LOPAFNIE_00969 1.1e-86 S Aminoacyl-tRNA editing domain
LOPAFNIE_00970 1.6e-127 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LOPAFNIE_00971 6.9e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LOPAFNIE_00972 6.7e-69 yxeH S hydrolase
LOPAFNIE_00973 2.9e-156 S reductase
LOPAFNIE_00974 1.6e-211 yttB EGP Major facilitator Superfamily
LOPAFNIE_00975 0.0 pepO 3.4.24.71 O Peptidase family M13
LOPAFNIE_00976 0.0 kup P Transport of potassium into the cell
LOPAFNIE_00977 8.8e-72
LOPAFNIE_00978 2.3e-66 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LOPAFNIE_00979 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LOPAFNIE_00980 3.6e-38
LOPAFNIE_00981 5.8e-272 P ABC transporter
LOPAFNIE_00982 2.9e-58
LOPAFNIE_00983 2.2e-102 rimL J Acetyltransferase (GNAT) domain
LOPAFNIE_00984 5.8e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
LOPAFNIE_00985 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LOPAFNIE_00986 1.3e-131 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LOPAFNIE_00987 1.1e-104 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LOPAFNIE_00988 1.5e-126 S Alpha/beta hydrolase family
LOPAFNIE_00989 7.1e-155 epsV 2.7.8.12 S glycosyl transferase family 2
LOPAFNIE_00990 3.5e-09 S Domain of unknown function (DUF3841)
LOPAFNIE_00991 2.4e-90
LOPAFNIE_00992 2e-62 V ABC transporter transmembrane region
LOPAFNIE_00993 1.1e-170 V ABC transporter transmembrane region
LOPAFNIE_00994 5.9e-12
LOPAFNIE_00995 4.9e-115 4.1.1.44 S Carboxymuconolactone decarboxylase family
LOPAFNIE_00996 5.5e-158 degV S DegV family
LOPAFNIE_00997 5.5e-135 V ABC transporter transmembrane region
LOPAFNIE_00998 6e-168 scrK 2.7.1.2, 2.7.1.4 GK ROK family
LOPAFNIE_01000 3.5e-15 S Transglycosylase associated protein
LOPAFNIE_01001 1.4e-296 L Transposase
LOPAFNIE_01002 3.8e-229 I Protein of unknown function (DUF2974)
LOPAFNIE_01003 2.9e-120 yhiD S MgtC family
LOPAFNIE_01004 1.2e-150
LOPAFNIE_01005 5.5e-286 FbpA K Fibronectin-binding protein
LOPAFNIE_01006 3.6e-25 L An automated process has identified a potential problem with this gene model
LOPAFNIE_01007 9.1e-59 L An automated process has identified a potential problem with this gene model
LOPAFNIE_01009 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LOPAFNIE_01010 4.5e-269 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LOPAFNIE_01011 1.3e-138 3.5.1.47 S Peptidase dimerisation domain
LOPAFNIE_01012 5.9e-44 3.5.1.47 S Peptidase dimerisation domain
LOPAFNIE_01013 8.2e-233 cycA E Amino acid permease
LOPAFNIE_01014 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LOPAFNIE_01015 2.5e-160 D nuclear chromosome segregation
LOPAFNIE_01016 1.2e-105 G Phosphoglycerate mutase family
LOPAFNIE_01017 2.6e-89 G Histidine phosphatase superfamily (branch 1)
LOPAFNIE_01018 1.7e-114 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
LOPAFNIE_01019 1.9e-113 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LOPAFNIE_01021 7.1e-300 oppA2 E ABC transporter, substratebinding protein
LOPAFNIE_01022 1.1e-179
LOPAFNIE_01023 1.3e-125 gntR1 K UTRA
LOPAFNIE_01024 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
LOPAFNIE_01025 6.2e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
LOPAFNIE_01026 2.6e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LOPAFNIE_01027 2.6e-35 noxC 1.5.1.39 C coenzyme F420-1:gamma-L-glutamate ligase activity
LOPAFNIE_01028 1.2e-66 3.1.3.102, 3.1.3.104 G Sucrose-6F-phosphate phosphohydrolase
LOPAFNIE_01029 1.2e-155 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LOPAFNIE_01030 5.1e-270 L COG2963 Transposase and inactivated derivatives
LOPAFNIE_01031 9.8e-09 thrE S Putative threonine/serine exporter
LOPAFNIE_01032 8.7e-84 S Threonine/Serine exporter, ThrE
LOPAFNIE_01033 2.4e-112 yvpB S Peptidase_C39 like family
LOPAFNIE_01034 2e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LOPAFNIE_01035 1.8e-84
LOPAFNIE_01036 1.5e-59 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
LOPAFNIE_01037 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
LOPAFNIE_01038 1.1e-250 glnA 6.3.1.2 E glutamine synthetase
LOPAFNIE_01040 3.9e-243 steT E amino acid
LOPAFNIE_01041 8e-241 steT E amino acid
LOPAFNIE_01042 6.1e-151
LOPAFNIE_01043 5e-173 S Aldo keto reductase
LOPAFNIE_01044 2.7e-310 ybiT S ABC transporter, ATP-binding protein
LOPAFNIE_01045 2.3e-209 pepA E M42 glutamyl aminopeptidase
LOPAFNIE_01046 3.1e-78
LOPAFNIE_01047 7.6e-71 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LOPAFNIE_01048 8.1e-255 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LOPAFNIE_01049 1.7e-168 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LOPAFNIE_01050 5.3e-281 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LOPAFNIE_01051 3.7e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LOPAFNIE_01052 6.6e-50 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LOPAFNIE_01053 1.1e-28 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LOPAFNIE_01054 5.1e-125 atpB C it plays a direct role in the translocation of protons across the membrane
LOPAFNIE_01055 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LOPAFNIE_01056 1.4e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LOPAFNIE_01057 1.1e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LOPAFNIE_01058 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LOPAFNIE_01059 1.3e-113 tdk 2.7.1.21 F thymidine kinase
LOPAFNIE_01060 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
LOPAFNIE_01063 1e-195 ampC V Beta-lactamase
LOPAFNIE_01064 9.9e-218 EGP Major facilitator Superfamily
LOPAFNIE_01065 4.6e-260 pgi 5.3.1.9 G Belongs to the GPI family
LOPAFNIE_01066 1.5e-08 isdH M Iron Transport-associated domain
LOPAFNIE_01067 3.2e-82
LOPAFNIE_01068 2e-274 pepV 3.5.1.18 E dipeptidase PepV
LOPAFNIE_01069 7.5e-97 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
LOPAFNIE_01070 4.9e-201 S Uncharacterized protein conserved in bacteria (DUF2325)
LOPAFNIE_01071 6.1e-257 pepC 3.4.22.40 E Peptidase C1-like family
LOPAFNIE_01072 1.7e-24 S SLAP domain
LOPAFNIE_01073 1.4e-33 yagE E amino acid
LOPAFNIE_01074 3.2e-98 yagE E Amino acid permease
LOPAFNIE_01075 4.5e-177 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LOPAFNIE_01077 8.9e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LOPAFNIE_01078 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
LOPAFNIE_01079 4.7e-131 M Glycosyl hydrolases family 25
LOPAFNIE_01080 3.7e-230 potE E amino acid
LOPAFNIE_01081 0.0 1.3.5.4 C FAD binding domain
LOPAFNIE_01082 5.8e-49 L PFAM transposase, IS4 family protein
LOPAFNIE_01083 2.9e-88 L PFAM transposase, IS4 family protein
LOPAFNIE_01085 2.6e-26 S Domain of unknown function (DUF771)
LOPAFNIE_01086 4.9e-30 K Helix-turn-helix domain
LOPAFNIE_01087 1.8e-153
LOPAFNIE_01088 9.5e-34 rmaI K Transcriptional regulator
LOPAFNIE_01089 2.3e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LOPAFNIE_01090 1.2e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
LOPAFNIE_01091 7.7e-219 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LOPAFNIE_01092 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
LOPAFNIE_01093 1.7e-131 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LOPAFNIE_01094 6.1e-154 yeaE S Aldo/keto reductase family
LOPAFNIE_01095 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
LOPAFNIE_01096 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
LOPAFNIE_01097 5.2e-284 xylG 3.6.3.17 S ABC transporter
LOPAFNIE_01098 3.3e-200 tcsA S ABC transporter substrate-binding protein PnrA-like
LOPAFNIE_01099 1.8e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
LOPAFNIE_01100 2.4e-220 patA 2.6.1.1 E Aminotransferase
LOPAFNIE_01101 1.6e-163
LOPAFNIE_01102 3.5e-39 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LOPAFNIE_01103 7.5e-244 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
LOPAFNIE_01104 7.5e-236 S Uncharacterized protein conserved in bacteria (DUF2325)
LOPAFNIE_01105 3.6e-63 yodB K Transcriptional regulator, HxlR family
LOPAFNIE_01106 2.3e-139 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LOPAFNIE_01107 2e-42 S RelB antitoxin
LOPAFNIE_01108 4.9e-69 S HicB_like antitoxin of bacterial toxin-antitoxin system
LOPAFNIE_01109 5.3e-239 oppA E ABC transporter substrate-binding protein
LOPAFNIE_01110 1.2e-53
LOPAFNIE_01111 4.7e-157 mutR K Helix-turn-helix XRE-family like proteins
LOPAFNIE_01112 3.9e-73 S Putative adhesin
LOPAFNIE_01113 5.5e-281 V ABC transporter transmembrane region
LOPAFNIE_01114 1.7e-205 napA P Sodium/hydrogen exchanger family
LOPAFNIE_01115 0.0 cadA P P-type ATPase
LOPAFNIE_01116 1.9e-80 ykuL S (CBS) domain
LOPAFNIE_01117 4.8e-78 S PAS domain
LOPAFNIE_01118 1.8e-107 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LOPAFNIE_01119 1e-35 U TraM recognition site of TraD and TraG
LOPAFNIE_01120 8.6e-10 E Amino acid permease
LOPAFNIE_01121 9.5e-151 E Amino acid permease
LOPAFNIE_01122 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LOPAFNIE_01123 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LOPAFNIE_01124 1.1e-34 S Protein of unknown function (DUF2508)
LOPAFNIE_01125 1.8e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LOPAFNIE_01126 3.6e-240 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LOPAFNIE_01127 2.5e-92 S SNARE associated Golgi protein
LOPAFNIE_01128 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
LOPAFNIE_01129 5.4e-172 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LOPAFNIE_01130 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LOPAFNIE_01131 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
LOPAFNIE_01132 3.6e-111 yjbK S CYTH
LOPAFNIE_01133 6e-114 yjbH Q Thioredoxin
LOPAFNIE_01134 3.8e-159 coiA 3.6.4.12 S Competence protein
LOPAFNIE_01135 5.5e-138 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LOPAFNIE_01136 2.9e-21 S membrane transporter protein
LOPAFNIE_01137 2.5e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LOPAFNIE_01138 6.1e-108 psaA P Belongs to the bacterial solute-binding protein 9 family
LOPAFNIE_01141 9.3e-81 S AAA domain
LOPAFNIE_01142 3.7e-61 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
LOPAFNIE_01143 1.5e-208 XK27_01810 S Calcineurin-like phosphoesterase
LOPAFNIE_01144 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
LOPAFNIE_01145 5.8e-38
LOPAFNIE_01146 1.9e-118 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
LOPAFNIE_01147 5.8e-79 fhaB M Rib/alpha-like repeat
LOPAFNIE_01148 6.6e-273 cydA 1.10.3.14 C ubiquinol oxidase
LOPAFNIE_01149 4.3e-178 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
LOPAFNIE_01150 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
LOPAFNIE_01151 1.4e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LOPAFNIE_01152 4.9e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
LOPAFNIE_01153 5.5e-178 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LOPAFNIE_01154 1.6e-85 2.4.2.3 F Phosphorylase superfamily
LOPAFNIE_01155 9.1e-102 emrY EGP Major facilitator Superfamily
LOPAFNIE_01156 1.2e-48 yxdD K Bacterial regulatory proteins, tetR family
LOPAFNIE_01157 1.5e-200 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
LOPAFNIE_01158 5.9e-188 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LOPAFNIE_01159 1.4e-165 mdtG EGP Major facilitator Superfamily
LOPAFNIE_01160 5.8e-194 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
LOPAFNIE_01161 7.6e-16 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
LOPAFNIE_01162 1.7e-170 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
LOPAFNIE_01163 5.8e-299 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LOPAFNIE_01164 5.2e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LOPAFNIE_01165 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LOPAFNIE_01166 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LOPAFNIE_01167 2e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LOPAFNIE_01168 6.3e-63 yabR J S1 RNA binding domain
LOPAFNIE_01170 7.9e-97 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LOPAFNIE_01171 1.6e-143 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LOPAFNIE_01172 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
LOPAFNIE_01173 3.5e-84
LOPAFNIE_01174 2.5e-138 glcR K DeoR C terminal sensor domain
LOPAFNIE_01175 1.4e-121 L Transposase
LOPAFNIE_01176 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
LOPAFNIE_01177 4.2e-98 yceD S Uncharacterized ACR, COG1399
LOPAFNIE_01178 2.2e-210 ylbM S Belongs to the UPF0348 family
LOPAFNIE_01179 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LOPAFNIE_01180 2.5e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
LOPAFNIE_01181 1.2e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LOPAFNIE_01182 9.8e-200 yqeH S Ribosome biogenesis GTPase YqeH
LOPAFNIE_01183 2.9e-85 yqeG S HAD phosphatase, family IIIA
LOPAFNIE_01184 3.6e-153 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LOPAFNIE_01185 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LOPAFNIE_01186 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
LOPAFNIE_01187 1.1e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LOPAFNIE_01188 2.8e-137 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
LOPAFNIE_01189 1.8e-12 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
LOPAFNIE_01190 2e-29
LOPAFNIE_01191 2.2e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
LOPAFNIE_01192 6.7e-30 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LOPAFNIE_01193 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LOPAFNIE_01194 2.3e-22 XK27_07075 S CAAX protease self-immunity
LOPAFNIE_01195 4.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
LOPAFNIE_01196 3.7e-85 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LOPAFNIE_01197 1.4e-11 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LOPAFNIE_01198 3.8e-111 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LOPAFNIE_01199 2.3e-21 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
LOPAFNIE_01200 1.2e-53
LOPAFNIE_01202 1.4e-258 pepC 3.4.22.40 E aminopeptidase
LOPAFNIE_01203 2.6e-123 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
LOPAFNIE_01204 1.7e-301 oppA E ABC transporter, substratebinding protein
LOPAFNIE_01205 5e-309 oppA E ABC transporter, substratebinding protein
LOPAFNIE_01207 7.2e-68 dnaD L DnaD domain protein
LOPAFNIE_01208 2.7e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LOPAFNIE_01209 1.4e-173 D Alpha beta
LOPAFNIE_01210 1.7e-83 MA20_14895 S Conserved hypothetical protein 698
LOPAFNIE_01211 3.6e-45 MA20_14895 S Conserved hypothetical protein 698
LOPAFNIE_01212 2.6e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LOPAFNIE_01213 2.4e-37 S RelB antitoxin
LOPAFNIE_01214 2.2e-162
LOPAFNIE_01215 5.2e-62 cpdA S Calcineurin-like phosphoesterase
LOPAFNIE_01216 3.4e-79
LOPAFNIE_01217 1.1e-175 citR K Putative sugar-binding domain
LOPAFNIE_01218 3.7e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LOPAFNIE_01219 2e-266 S Fibronectin type III domain
LOPAFNIE_01220 0.0 XK27_08315 M Sulfatase
LOPAFNIE_01221 5.6e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LOPAFNIE_01222 7.8e-180 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LOPAFNIE_01223 4.8e-81 mutT 3.6.1.55 F NUDIX domain
LOPAFNIE_01224 7e-136 K Helix-turn-helix XRE-family like proteins
LOPAFNIE_01225 1.5e-90 speG J Acetyltransferase (GNAT) domain
LOPAFNIE_01226 5.8e-152 V ABC-type multidrug transport system, ATPase and permease components
LOPAFNIE_01227 2e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LOPAFNIE_01228 2.9e-12
LOPAFNIE_01229 9.6e-86 scrR K Periplasmic binding protein domain
LOPAFNIE_01230 3.7e-111 K WHG domain
LOPAFNIE_01231 1.1e-178 comEC S Competence protein ComEC
LOPAFNIE_01232 1.2e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LOPAFNIE_01233 5e-59 infB UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_01235 1.6e-08
LOPAFNIE_01237 1.1e-80 yebR 1.8.4.14 T GAF domain-containing protein
LOPAFNIE_01238 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LOPAFNIE_01239 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LOPAFNIE_01240 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LOPAFNIE_01241 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
LOPAFNIE_01242 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LOPAFNIE_01243 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LOPAFNIE_01244 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LOPAFNIE_01245 3.3e-34 K response regulator
LOPAFNIE_01246 5.1e-113 2.7.6.5 T Region found in RelA / SpoT proteins
LOPAFNIE_01247 1.1e-27 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LOPAFNIE_01248 4.1e-156 holA 2.7.7.7 L DNA polymerase III delta subunit
LOPAFNIE_01249 2.6e-10 K helix_turn_helix, arabinose operon control protein
LOPAFNIE_01250 7.8e-73
LOPAFNIE_01251 2e-127 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LOPAFNIE_01252 7.8e-112 K Transcriptional regulator
LOPAFNIE_01253 3.3e-106 tag 3.2.2.20 L glycosylase
LOPAFNIE_01254 2.2e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LOPAFNIE_01255 2.3e-118 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LOPAFNIE_01256 4.1e-136 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LOPAFNIE_01257 1.2e-150 phnD P Phosphonate ABC transporter
LOPAFNIE_01258 5.2e-84 uspA T universal stress protein
LOPAFNIE_01259 1.7e-148 ptp3 3.1.3.48 T Tyrosine phosphatase family
LOPAFNIE_01260 7e-89 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LOPAFNIE_01261 3.6e-90 ntd 2.4.2.6 F Nucleoside
LOPAFNIE_01262 6.3e-23 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
LOPAFNIE_01263 1.6e-07
LOPAFNIE_01264 1.4e-107 M Transport protein ComB
LOPAFNIE_01265 9.7e-141 yitS S Uncharacterised protein, DegV family COG1307
LOPAFNIE_01266 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LOPAFNIE_01267 3.2e-127 S SLAP domain
LOPAFNIE_01269 1.2e-32
LOPAFNIE_01270 3.2e-77 S HIRAN
LOPAFNIE_01271 1.4e-112 S SLAP domain
LOPAFNIE_01272 4.4e-85 dps P Belongs to the Dps family
LOPAFNIE_01273 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
LOPAFNIE_01274 9.9e-75 P Cobalt transport protein
LOPAFNIE_01275 2.9e-159 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
LOPAFNIE_01276 5e-91 G Peptidase_C39 like family
LOPAFNIE_01277 6.3e-162 M NlpC/P60 family
LOPAFNIE_01278 1.6e-33 G Peptidase_C39 like family
LOPAFNIE_01279 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LOPAFNIE_01280 3.7e-143 htrA 3.4.21.107 O serine protease
LOPAFNIE_01281 1.2e-116 mmuP E amino acid
LOPAFNIE_01282 9.9e-98 L An automated process has identified a potential problem with this gene model
LOPAFNIE_01283 2.9e-66 S Domain of unknown function DUF1828
LOPAFNIE_01284 5.5e-09
LOPAFNIE_01285 6.2e-108 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LOPAFNIE_01287 5.4e-125 S Sterol carrier protein domain
LOPAFNIE_01288 4.7e-152 dprA LU DNA protecting protein DprA
LOPAFNIE_01289 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LOPAFNIE_01290 1.8e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LOPAFNIE_01291 2.2e-141 xerC D Phage integrase, N-terminal SAM-like domain
LOPAFNIE_01292 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LOPAFNIE_01293 4.5e-234 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LOPAFNIE_01294 1.3e-77 M LysM domain protein
LOPAFNIE_01295 5e-59 ybbH_2 K rpiR family
LOPAFNIE_01296 7e-147 arcA 3.5.3.6 E Arginine
LOPAFNIE_01297 1.1e-115 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LOPAFNIE_01300 7.4e-74
LOPAFNIE_01301 4e-133 gmuR K UTRA
LOPAFNIE_01302 1.3e-75
LOPAFNIE_01303 2.3e-67 S cog cog1373
LOPAFNIE_01304 8.3e-148
LOPAFNIE_01305 3.6e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LOPAFNIE_01306 1.1e-140 hlyX S Transporter associated domain
LOPAFNIE_01307 1.7e-73
LOPAFNIE_01308 1.6e-85
LOPAFNIE_01309 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
LOPAFNIE_01310 1.6e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LOPAFNIE_01312 3.6e-63
LOPAFNIE_01313 1.2e-100 rodA D Belongs to the SEDS family
LOPAFNIE_01314 6.8e-66 M LysM domain protein
LOPAFNIE_01315 2.7e-101 ykuT M mechanosensitive ion channel
LOPAFNIE_01316 1.6e-35
LOPAFNIE_01317 2.5e-75 scrR K Periplasmic binding protein domain
LOPAFNIE_01318 5.9e-146 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
LOPAFNIE_01319 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LOPAFNIE_01320 8.4e-58 S response to antibiotic
LOPAFNIE_01321 3.5e-54 trxA O Belongs to the thioredoxin family
LOPAFNIE_01322 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LOPAFNIE_01323 3.6e-111 G Phosphoglycerate mutase family
LOPAFNIE_01324 1.3e-20 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LOPAFNIE_01325 1.5e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LOPAFNIE_01326 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LOPAFNIE_01327 2.7e-18 M Lysin motif
LOPAFNIE_01328 8.5e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
LOPAFNIE_01329 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
LOPAFNIE_01330 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
LOPAFNIE_01331 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LOPAFNIE_01332 2.2e-25 K Helix-turn-helix domain
LOPAFNIE_01335 1.4e-24 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LOPAFNIE_01336 7.9e-67 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LOPAFNIE_01337 2.3e-104 S Fic/DOC family
LOPAFNIE_01338 2.8e-100 S ECF transporter, substrate-specific component
LOPAFNIE_01340 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LOPAFNIE_01341 0.0 macB_3 V ABC transporter, ATP-binding protein
LOPAFNIE_01342 1.5e-71 S DUF218 domain
LOPAFNIE_01343 1.7e-76 S DUF218 domain
LOPAFNIE_01344 1.3e-17
LOPAFNIE_01345 1.3e-123 K Helix-turn-helix XRE-family like proteins
LOPAFNIE_01346 1.6e-123 V ABC transporter transmembrane region
LOPAFNIE_01347 8.5e-105 vanZ V VanZ like family
LOPAFNIE_01348 2.9e-44
LOPAFNIE_01349 4.1e-07 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LOPAFNIE_01350 1.1e-34 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LOPAFNIE_01351 5e-39 relB L RelB antitoxin
LOPAFNIE_01352 7.3e-86
LOPAFNIE_01353 7e-35 lacE-1 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
LOPAFNIE_01354 4.2e-07 mlc GK carbohydrate kinase activity
LOPAFNIE_01355 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LOPAFNIE_01356 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LOPAFNIE_01357 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LOPAFNIE_01358 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LOPAFNIE_01359 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LOPAFNIE_01360 1.4e-60 rplQ J Ribosomal protein L17
LOPAFNIE_01361 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LOPAFNIE_01362 4.6e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LOPAFNIE_01363 2.6e-138 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LOPAFNIE_01364 7.8e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LOPAFNIE_01365 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LOPAFNIE_01366 1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
LOPAFNIE_01367 2.2e-33
LOPAFNIE_01368 6.1e-109 drgA C nitroreductase
LOPAFNIE_01369 9.1e-124 ylmH S S4 domain protein
LOPAFNIE_01370 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LOPAFNIE_01371 5.5e-29 K Helix-turn-helix XRE-family like proteins
LOPAFNIE_01372 2.4e-72 S SLAP domain
LOPAFNIE_01373 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
LOPAFNIE_01374 1.2e-293 scrB 3.2.1.26 GH32 G invertase
LOPAFNIE_01375 8e-169 scrR K helix_turn _helix lactose operon repressor
LOPAFNIE_01376 1.2e-141 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
LOPAFNIE_01377 3.3e-21 V ABC transporter transmembrane region
LOPAFNIE_01378 1.9e-11
LOPAFNIE_01379 4.3e-39 ybjQ S Belongs to the UPF0145 family
LOPAFNIE_01380 3.6e-69 T Toxin-antitoxin system, toxin component, MazF family
LOPAFNIE_01381 1.7e-15
LOPAFNIE_01382 1.2e-43
LOPAFNIE_01383 3.6e-79 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LOPAFNIE_01384 3.8e-110 M CHAP domain
LOPAFNIE_01385 9.4e-43 2.4.1.58 GT8 M family 8
LOPAFNIE_01386 2e-94 S VanZ like family
LOPAFNIE_01387 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LOPAFNIE_01388 2.1e-168 dnaI L Primosomal protein DnaI
LOPAFNIE_01389 3e-251 dnaB L Replication initiation and membrane attachment
LOPAFNIE_01390 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LOPAFNIE_01391 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LOPAFNIE_01392 8.5e-156 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LOPAFNIE_01393 4.2e-65 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LOPAFNIE_01394 6.8e-75 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
LOPAFNIE_01395 2.5e-87 lysR5 K LysR substrate binding domain
LOPAFNIE_01396 9e-118 3.6.1.55 F NUDIX domain
LOPAFNIE_01398 5e-07 yokH G SMI1 / KNR4 family
LOPAFNIE_01399 1.7e-102 degV S EDD domain protein, DegV family
LOPAFNIE_01400 1.4e-80 K Transcriptional regulator, MarR family
LOPAFNIE_01401 1.7e-310 XK27_09600 V ABC transporter, ATP-binding protein
LOPAFNIE_01402 0.0 V ABC transporter transmembrane region
LOPAFNIE_01403 3.8e-102 S ABC-type cobalt transport system, permease component
LOPAFNIE_01404 2.3e-254 G MFS/sugar transport protein
LOPAFNIE_01405 3.3e-92 udk 2.7.1.48 F Zeta toxin
LOPAFNIE_01406 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
LOPAFNIE_01407 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
LOPAFNIE_01408 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LOPAFNIE_01409 5.8e-203 camS S sex pheromone
LOPAFNIE_01410 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LOPAFNIE_01411 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LOPAFNIE_01412 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LOPAFNIE_01413 7.2e-172 yegS 2.7.1.107 G Lipid kinase
LOPAFNIE_01414 4.3e-108 ybhL S Belongs to the BI1 family
LOPAFNIE_01415 1.3e-56
LOPAFNIE_01416 2.4e-147 I transferase activity, transferring acyl groups other than amino-acyl groups
LOPAFNIE_01417 2.8e-244 nhaC C Na H antiporter NhaC
LOPAFNIE_01418 2.9e-93 M Glycosyl transferase family 2
LOPAFNIE_01419 8.9e-51
LOPAFNIE_01420 3.5e-108 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LOPAFNIE_01422 6.1e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LOPAFNIE_01423 4.3e-176 hrtB V ABC transporter permease
LOPAFNIE_01424 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
LOPAFNIE_01425 2.6e-99 metQ1 P Belongs to the nlpA lipoprotein family
LOPAFNIE_01426 2e-155 metC1 4.4.1.8 E cystathionine
LOPAFNIE_01427 1.4e-156 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
LOPAFNIE_01428 8.2e-276 pipD E Dipeptidase
LOPAFNIE_01435 3.8e-66 recO L Involved in DNA repair and RecF pathway recombination
LOPAFNIE_01436 1.8e-43 C Aldo keto reductase
LOPAFNIE_01437 2e-39 S Transglycosylase associated protein
LOPAFNIE_01438 8.1e-87 ynbB 4.4.1.1 P aluminum resistance
LOPAFNIE_01439 1.1e-66
LOPAFNIE_01440 3.2e-34 XK27_02470 K LytTr DNA-binding domain
LOPAFNIE_01441 7.9e-92 liaI S membrane
LOPAFNIE_01442 4e-16
LOPAFNIE_01443 1.5e-190 S Putative peptidoglycan binding domain
LOPAFNIE_01444 2.5e-157 2.7.7.12 C Domain of unknown function (DUF4931)
LOPAFNIE_01445 9e-121
LOPAFNIE_01446 2.2e-142 S Belongs to the UPF0246 family
LOPAFNIE_01447 4.9e-142 aroD S Alpha/beta hydrolase family
LOPAFNIE_01448 5.5e-112 G phosphoglycerate mutase
LOPAFNIE_01449 6.3e-53 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
LOPAFNIE_01450 8.1e-50 D VirC1 protein
LOPAFNIE_01452 4.6e-42 S Enterocin A Immunity
LOPAFNIE_01454 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LOPAFNIE_01455 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LOPAFNIE_01456 2.3e-248 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
LOPAFNIE_01457 9.3e-237 mepA V MATE efflux family protein
LOPAFNIE_01458 7.4e-175 S SLAP domain
LOPAFNIE_01459 7.8e-277 M Peptidase family M1 domain
LOPAFNIE_01460 4.6e-64 ydjP I Alpha/beta hydrolase family
LOPAFNIE_01461 9.1e-80 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LOPAFNIE_01462 1.3e-41 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
LOPAFNIE_01463 6.5e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
LOPAFNIE_01464 5.6e-18 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
LOPAFNIE_01465 7.4e-11 relB L Addiction module antitoxin, RelB DinJ family
LOPAFNIE_01466 1.3e-60 S SLAP domain
LOPAFNIE_01467 2.2e-305 vicK 2.7.13.3 T Histidine kinase
LOPAFNIE_01468 4.8e-131 K response regulator
LOPAFNIE_01470 1.4e-149 arbV 2.3.1.51 I Acyl-transferase
LOPAFNIE_01471 5.9e-157 arbx M Glycosyl transferase family 8
LOPAFNIE_01472 4.5e-185 arbY M Glycosyl transferase family 8
LOPAFNIE_01473 6e-182 arbY M Glycosyl transferase family 8
LOPAFNIE_01474 2e-46 pdxH S Pyridoxamine 5'-phosphate oxidase
LOPAFNIE_01475 3.2e-71 S Domain of unknown function (DUF3284)
LOPAFNIE_01476 1.9e-19 V ABC-type multidrug transport system, ATPase and permease components
LOPAFNIE_01477 8.9e-56 rimL J Acetyltransferase (GNAT) domain
LOPAFNIE_01478 3.1e-51
LOPAFNIE_01479 1.6e-85 3.4.21.96 S SLAP domain
LOPAFNIE_01480 3.8e-193 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LOPAFNIE_01481 4.8e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
LOPAFNIE_01482 4.1e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
LOPAFNIE_01483 1.5e-86 S ECF transporter, substrate-specific component
LOPAFNIE_01484 6.4e-131 fat 3.1.2.21 I Acyl-ACP thioesterase
LOPAFNIE_01485 1.5e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LOPAFNIE_01486 1.8e-59 yabA L Involved in initiation control of chromosome replication
LOPAFNIE_01487 1.3e-154 holB 2.7.7.7 L DNA polymerase III
LOPAFNIE_01488 8.9e-53 yaaQ S Cyclic-di-AMP receptor
LOPAFNIE_01489 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LOPAFNIE_01490 1.1e-34 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LOPAFNIE_01491 2.1e-85 yjeM E Amino Acid
LOPAFNIE_01492 0.0 dnaE 2.7.7.7 L DNA polymerase
LOPAFNIE_01493 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LOPAFNIE_01494 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
LOPAFNIE_01495 1.9e-169 cvfB S S1 domain
LOPAFNIE_01496 3.1e-167 xerD D recombinase XerD
LOPAFNIE_01497 2.9e-31
LOPAFNIE_01498 9.9e-62 ypaA S Protein of unknown function (DUF1304)
LOPAFNIE_01499 1.8e-18 V ATPases associated with a variety of cellular activities
LOPAFNIE_01500 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LOPAFNIE_01501 7.1e-121 3.6.1.27 I Acid phosphatase homologues
LOPAFNIE_01502 4.5e-166 K LysR substrate binding domain
LOPAFNIE_01503 3.6e-91 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LOPAFNIE_01504 2.4e-55 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
LOPAFNIE_01506 1.1e-41 sigH K Belongs to the sigma-70 factor family
LOPAFNIE_01507 1.7e-34
LOPAFNIE_01508 1.7e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
LOPAFNIE_01509 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LOPAFNIE_01510 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LOPAFNIE_01511 1.1e-101 nusG K Participates in transcription elongation, termination and antitermination
LOPAFNIE_01512 2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LOPAFNIE_01513 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LOPAFNIE_01516 1.5e-68 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LOPAFNIE_01518 1.1e-18 K Helix-turn-helix domain
LOPAFNIE_01519 2.6e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LOPAFNIE_01520 1.8e-37
LOPAFNIE_01521 9.8e-103 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
LOPAFNIE_01522 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
LOPAFNIE_01523 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LOPAFNIE_01524 2.4e-55 gpsB D DivIVA domain protein
LOPAFNIE_01529 6.1e-54 L Transposase
LOPAFNIE_01530 8.1e-175 O Belongs to the peptidase S8 family
LOPAFNIE_01531 7e-240 L Transposase DDE domain
LOPAFNIE_01532 0.0 O Belongs to the peptidase S8 family
LOPAFNIE_01533 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LOPAFNIE_01534 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LOPAFNIE_01535 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LOPAFNIE_01536 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LOPAFNIE_01537 4.5e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LOPAFNIE_01538 6.7e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LOPAFNIE_01539 9.6e-41 yajC U Preprotein translocase
LOPAFNIE_01540 5.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LOPAFNIE_01541 5.9e-216 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LOPAFNIE_01543 3e-50 cas2 2.7.7.7 L CRISPR-associated protein (Cas_Cas2CT1978)
LOPAFNIE_01544 0.0 aha1 P E1-E2 ATPase
LOPAFNIE_01545 5.8e-177 F DNA/RNA non-specific endonuclease
LOPAFNIE_01546 2.9e-159 metQ2 P Belongs to the nlpA lipoprotein family
LOPAFNIE_01547 3e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LOPAFNIE_01548 2e-73 metI P ABC transporter permease
LOPAFNIE_01552 2.8e-174 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LOPAFNIE_01553 1.6e-266 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
LOPAFNIE_01554 2.6e-132 K Transcriptional regulatory protein, C terminal
LOPAFNIE_01555 3.6e-190 manA 5.3.1.8 G mannose-6-phosphate isomerase
LOPAFNIE_01556 5.4e-225 patB 4.4.1.8 E Aminotransferase, class I
LOPAFNIE_01557 3.1e-53 M Protein of unknown function (DUF3737)
LOPAFNIE_01558 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LOPAFNIE_01559 4.4e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LOPAFNIE_01560 1.6e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LOPAFNIE_01561 2.6e-247 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LOPAFNIE_01562 5.5e-205 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LOPAFNIE_01564 9.2e-164 natA S ABC transporter, ATP-binding protein
LOPAFNIE_01565 2.7e-219 natB CP ABC-2 family transporter protein
LOPAFNIE_01566 1.8e-136 fruR K DeoR C terminal sensor domain
LOPAFNIE_01567 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
LOPAFNIE_01568 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
LOPAFNIE_01569 7.5e-20
LOPAFNIE_01572 5.7e-140 puuD S peptidase C26
LOPAFNIE_01573 1e-230 steT_1 E amino acid
LOPAFNIE_01574 1.3e-190 asnA 6.3.1.1 F aspartate--ammonia ligase
LOPAFNIE_01575 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
LOPAFNIE_01578 7e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LOPAFNIE_01579 5.4e-19 ytgP S Polysaccharide biosynthesis protein
LOPAFNIE_01580 1.3e-41 relB L RelB antitoxin
LOPAFNIE_01581 1.3e-47 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
LOPAFNIE_01582 2.5e-176 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LOPAFNIE_01583 1.4e-148 epsB M biosynthesis protein
LOPAFNIE_01584 3.1e-123 ywqD 2.7.10.1 D Capsular exopolysaccharide family
LOPAFNIE_01585 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
LOPAFNIE_01586 2.2e-122 rfbP M Bacterial sugar transferase
LOPAFNIE_01587 3.1e-138 M Glycosyl transferases group 1
LOPAFNIE_01589 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
LOPAFNIE_01590 6.4e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LOPAFNIE_01591 8.8e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LOPAFNIE_01592 2.9e-113 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LOPAFNIE_01596 1.2e-27 M domain protein
LOPAFNIE_01597 3.7e-31 acyP 3.6.1.7 C Belongs to the acylphosphatase family
LOPAFNIE_01598 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LOPAFNIE_01599 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LOPAFNIE_01600 6.8e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
LOPAFNIE_01601 2.2e-111 S SLAP domain
LOPAFNIE_01602 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
LOPAFNIE_01603 5.7e-69 rplI J Binds to the 23S rRNA
LOPAFNIE_01604 1.4e-251 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LOPAFNIE_01605 2.7e-166 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
LOPAFNIE_01606 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LOPAFNIE_01607 1.2e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LOPAFNIE_01608 8.9e-229 pbuX F xanthine permease
LOPAFNIE_01609 6e-154 msmR K AraC-like ligand binding domain
LOPAFNIE_01610 6.5e-281 pipD E Dipeptidase
LOPAFNIE_01611 1.3e-47 adk 2.7.4.3 F AAA domain
LOPAFNIE_01612 4e-80 K acetyltransferase
LOPAFNIE_01613 2.8e-246 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LOPAFNIE_01614 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LOPAFNIE_01615 1.4e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LOPAFNIE_01616 4.3e-68 S Domain of unknown function (DUF1934)
LOPAFNIE_01617 9e-127 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LOPAFNIE_01618 1.8e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LOPAFNIE_01619 3.8e-161 2.7.7.12 C Domain of unknown function (DUF4931)
LOPAFNIE_01620 2.5e-184 G Bacterial extracellular solute-binding protein
LOPAFNIE_01621 2.4e-37 G Bacterial extracellular solute-binding protein
LOPAFNIE_01624 6.1e-15 pspC KT PspC domain
LOPAFNIE_01625 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
LOPAFNIE_01626 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LOPAFNIE_01627 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
LOPAFNIE_01628 1.1e-50 yrzB S Belongs to the UPF0473 family
LOPAFNIE_01629 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LOPAFNIE_01630 2e-42 yrzL S Belongs to the UPF0297 family
LOPAFNIE_01631 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LOPAFNIE_01632 1.4e-227 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LOPAFNIE_01633 1.6e-33 yabO J S4 domain protein
LOPAFNIE_01634 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LOPAFNIE_01635 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LOPAFNIE_01636 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LOPAFNIE_01637 6.8e-26 S membrane transporter protein
LOPAFNIE_01638 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
LOPAFNIE_01639 5.1e-162 czcD P cation diffusion facilitator family transporter
LOPAFNIE_01640 1.4e-23
LOPAFNIE_01641 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LOPAFNIE_01642 1.1e-183 S AAA domain
LOPAFNIE_01643 8.1e-51
LOPAFNIE_01644 9.8e-252 pepC 3.4.22.40 E Peptidase C1-like family
LOPAFNIE_01645 2e-181 E Sodium:solute symporter family
LOPAFNIE_01646 5.1e-152 4.3.3.7 EM Dihydrodipicolinate synthetase family
LOPAFNIE_01647 1.2e-76 K Transcriptional
LOPAFNIE_01648 4e-64 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
LOPAFNIE_01649 9.7e-83 S An automated process has identified a potential problem with this gene model
LOPAFNIE_01650 3.1e-99 S Protein of unknown function (DUF3100)
LOPAFNIE_01651 8.4e-116 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
LOPAFNIE_01652 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
LOPAFNIE_01653 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LOPAFNIE_01654 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LOPAFNIE_01655 4.6e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
LOPAFNIE_01656 1.6e-21
LOPAFNIE_01657 3.8e-77 comGF U Putative Competence protein ComGF
LOPAFNIE_01658 2.3e-41
LOPAFNIE_01659 7.4e-71
LOPAFNIE_01660 3.1e-43 comGC U competence protein ComGC
LOPAFNIE_01661 3.3e-167 comGB NU type II secretion system
LOPAFNIE_01662 2.4e-178 comGA NU Type II IV secretion system protein
LOPAFNIE_01663 8.9e-133 yebC K Transcriptional regulatory protein
LOPAFNIE_01664 2.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LOPAFNIE_01665 0.0 smc D Required for chromosome condensation and partitioning
LOPAFNIE_01666 3.1e-160 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LOPAFNIE_01667 4.1e-37 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LOPAFNIE_01668 0.0 oppA E ABC transporter substrate-binding protein
LOPAFNIE_01669 1.1e-176 K AI-2E family transporter
LOPAFNIE_01670 3.1e-104 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
LOPAFNIE_01671 2.4e-18
LOPAFNIE_01672 5.2e-248 G Major Facilitator
LOPAFNIE_01673 8.1e-137 XK27_08845 S ABC transporter, ATP-binding protein
LOPAFNIE_01674 2.5e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
LOPAFNIE_01675 2.3e-176 ABC-SBP S ABC transporter
LOPAFNIE_01676 3.5e-134 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LOPAFNIE_01677 2e-141 P CorA-like Mg2+ transporter protein
LOPAFNIE_01678 3e-256 pepC 3.4.22.40 E aminopeptidase
LOPAFNIE_01679 1.9e-175 oppF P Belongs to the ABC transporter superfamily
LOPAFNIE_01680 6.1e-199 oppD P Belongs to the ABC transporter superfamily
LOPAFNIE_01681 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
LOPAFNIE_01682 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
LOPAFNIE_01683 2.7e-222 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LOPAFNIE_01684 7.5e-178 S Cysteine-rich secretory protein family
LOPAFNIE_01686 1.6e-41
LOPAFNIE_01687 2.6e-118 M NlpC/P60 family
LOPAFNIE_01688 4e-59 M NlpC P60 family protein
LOPAFNIE_01689 2.8e-157 pstS P Phosphate
LOPAFNIE_01690 3.9e-163 pstC P probably responsible for the translocation of the substrate across the membrane
LOPAFNIE_01691 1.2e-155 pstA P Phosphate transport system permease protein PstA
LOPAFNIE_01692 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LOPAFNIE_01693 7.8e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LOPAFNIE_01694 7.5e-118 phoU P Plays a role in the regulation of phosphate uptake
LOPAFNIE_01695 5e-240 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LOPAFNIE_01696 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LOPAFNIE_01697 6e-42 K Helix-turn-helix XRE-family like proteins
LOPAFNIE_01698 4.9e-63 S Phage derived protein Gp49-like (DUF891)
LOPAFNIE_01699 4.9e-15 1.3.5.4 C FAD binding domain
LOPAFNIE_01700 0.0 3.5.1.28 UW LPXTG-motif cell wall anchor domain protein
LOPAFNIE_01701 8.2e-179 yvdE K helix_turn _helix lactose operon repressor
LOPAFNIE_01702 6.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
LOPAFNIE_01703 1.7e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LOPAFNIE_01704 3.6e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LOPAFNIE_01705 6.9e-19
LOPAFNIE_01706 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LOPAFNIE_01707 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LOPAFNIE_01708 1.7e-29 secG U Preprotein translocase
LOPAFNIE_01709 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LOPAFNIE_01710 8.7e-148 ftsW D Belongs to the SEDS family
LOPAFNIE_01711 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
LOPAFNIE_01712 8.5e-96 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
LOPAFNIE_01713 1.3e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LOPAFNIE_01714 1.4e-187 ylbL T Belongs to the peptidase S16 family
LOPAFNIE_01715 1.8e-79 comEA L Competence protein ComEA
LOPAFNIE_01716 4.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LOPAFNIE_01717 2.3e-67 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LOPAFNIE_01718 0.0 dnaK O Heat shock 70 kDa protein
LOPAFNIE_01719 2.9e-202 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LOPAFNIE_01720 2.2e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
LOPAFNIE_01721 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LOPAFNIE_01722 2e-172 ybbR S YbbR-like protein
LOPAFNIE_01723 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LOPAFNIE_01724 1.4e-147 S hydrolase
LOPAFNIE_01725 1.1e-74 K Penicillinase repressor
LOPAFNIE_01726 1.6e-118
LOPAFNIE_01727 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LOPAFNIE_01728 4.5e-208 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LOPAFNIE_01729 5.4e-142 licT K CAT RNA binding domain
LOPAFNIE_01730 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
LOPAFNIE_01731 2.6e-301 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)