ORF_ID e_value Gene_name EC_number CAZy COGs Description
DNIMLDDP_00001 1.8e-259 S Uncharacterised protein family (UPF0236)
DNIMLDDP_00002 3.9e-237 L Transposase
DNIMLDDP_00003 1.1e-91 tra L Transposase and inactivated derivatives, IS30 family
DNIMLDDP_00004 4.1e-141 L transposase, IS605 OrfB family
DNIMLDDP_00005 4.2e-114 udp 2.4.2.3, 3.2.2.4 F Phosphorylase superfamily
DNIMLDDP_00006 1.4e-18 D nuclear chromosome segregation
DNIMLDDP_00011 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
DNIMLDDP_00012 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DNIMLDDP_00013 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNIMLDDP_00014 3.5e-163 S Tetratricopeptide repeat
DNIMLDDP_00015 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DNIMLDDP_00016 2.8e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DNIMLDDP_00017 1.8e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DNIMLDDP_00018 2.6e-106 engB D Necessary for normal cell division and for the maintenance of normal septation
DNIMLDDP_00019 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
DNIMLDDP_00020 7.6e-09
DNIMLDDP_00021 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DNIMLDDP_00022 5.2e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DNIMLDDP_00023 3.7e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
DNIMLDDP_00024 1.1e-155 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
DNIMLDDP_00025 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
DNIMLDDP_00026 9.2e-92 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DNIMLDDP_00027 2.5e-88
DNIMLDDP_00029 5.7e-126 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DNIMLDDP_00030 6e-208 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
DNIMLDDP_00031 5.5e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DNIMLDDP_00032 1.3e-35 ynzC S UPF0291 protein
DNIMLDDP_00033 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
DNIMLDDP_00034 1.6e-117 plsC 2.3.1.51 I Acyltransferase
DNIMLDDP_00035 5.4e-141 yabB 2.1.1.223 L Methyltransferase small domain
DNIMLDDP_00036 5.4e-49 yazA L GIY-YIG catalytic domain protein
DNIMLDDP_00037 5.9e-180 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNIMLDDP_00038 1.2e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
DNIMLDDP_00039 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DNIMLDDP_00040 4.1e-128 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
DNIMLDDP_00041 4.8e-94 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DNIMLDDP_00042 2.4e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DNIMLDDP_00043 1.7e-137 cdsA 2.7.7.41 I Belongs to the CDS family
DNIMLDDP_00044 3.7e-235 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
DNIMLDDP_00045 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DNIMLDDP_00046 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DNIMLDDP_00047 1.2e-82 rimP J Required for maturation of 30S ribosomal subunits
DNIMLDDP_00048 1.4e-215 nusA K Participates in both transcription termination and antitermination
DNIMLDDP_00049 1e-44 ylxR K Protein of unknown function (DUF448)
DNIMLDDP_00050 1.3e-48 ylxQ J ribosomal protein
DNIMLDDP_00051 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DNIMLDDP_00052 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DNIMLDDP_00053 7.1e-164 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DNIMLDDP_00054 8.5e-176 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
DNIMLDDP_00055 7.6e-64
DNIMLDDP_00056 5.9e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DNIMLDDP_00057 1.3e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DNIMLDDP_00058 0.0 dnaK O Heat shock 70 kDa protein
DNIMLDDP_00059 8.1e-197 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DNIMLDDP_00060 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DNIMLDDP_00061 1.1e-44 L Transposase DDE domain group 1
DNIMLDDP_00062 6e-88 oppA E ABC transporter, substratebinding protein
DNIMLDDP_00063 1e-116 L transposase IS116 IS110 IS902 family protein
DNIMLDDP_00064 1.2e-73 L PFAM Integrase catalytic region
DNIMLDDP_00067 1.3e-89 L Bacterial dnaA protein
DNIMLDDP_00068 1.7e-106 L hmm pf00665
DNIMLDDP_00069 1.3e-117 devA 3.6.3.25 V ABC transporter, ATP-binding protein
DNIMLDDP_00070 4.7e-167 hrtB V ABC transporter permease
DNIMLDDP_00071 3.7e-85 ygfC K transcriptional regulator (TetR family)
DNIMLDDP_00072 9.9e-191 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
DNIMLDDP_00073 8.9e-287 mntH P H( )-stimulated, divalent metal cation uptake system
DNIMLDDP_00074 2.3e-29
DNIMLDDP_00075 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DNIMLDDP_00077 8.6e-91 yxiO S Vacuole effluxer Atg22 like
DNIMLDDP_00078 2.8e-56 yxiO S Vacuole effluxer Atg22 like
DNIMLDDP_00079 9.8e-30 yxiO S Vacuole effluxer Atg22 like
DNIMLDDP_00080 3.2e-153 npp S type I phosphodiesterase nucleotide pyrophosphatase
DNIMLDDP_00081 7.9e-32 npp S type I phosphodiesterase nucleotide pyrophosphatase
DNIMLDDP_00082 2.3e-238 E amino acid
DNIMLDDP_00083 1.7e-67 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNIMLDDP_00084 2.8e-15 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNIMLDDP_00086 2e-219 yxjG_1 E methionine synthase, vitamin-B12 independent
DNIMLDDP_00087 1.1e-28 S Cytochrome B5
DNIMLDDP_00088 1.5e-74 elaA S Gnat family
DNIMLDDP_00089 1.2e-120 GM NmrA-like family
DNIMLDDP_00090 1.8e-50 hxlR K Transcriptional regulator, HxlR family
DNIMLDDP_00091 1.2e-106 XK27_02070 S Nitroreductase family
DNIMLDDP_00092 4e-83 K Transcriptional regulator, HxlR family
DNIMLDDP_00093 5.7e-231
DNIMLDDP_00094 2.2e-210 EGP Major facilitator Superfamily
DNIMLDDP_00095 3e-256 pepC 3.4.22.40 E aminopeptidase
DNIMLDDP_00096 5.3e-60 ylbE GM NAD dependent epimerase dehydratase family protein
DNIMLDDP_00097 4.1e-43 ylbE GM NAD dependent epimerase dehydratase family protein
DNIMLDDP_00098 0.0 pepN 3.4.11.2 E aminopeptidase
DNIMLDDP_00099 1.9e-48 K Transcriptional regulator
DNIMLDDP_00100 2.3e-24 folT S ECF transporter, substrate-specific component
DNIMLDDP_00101 1.9e-197 asnA 6.3.1.1 F aspartate--ammonia ligase
DNIMLDDP_00102 2.7e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
DNIMLDDP_00103 2.8e-120 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
DNIMLDDP_00104 5e-194 2.7.7.65 T GGDEF domain
DNIMLDDP_00105 1.7e-82
DNIMLDDP_00106 3.4e-247 pgaC GT2 M Glycosyl transferase
DNIMLDDP_00107 2.7e-138 T EAL domain
DNIMLDDP_00108 6.1e-128 yfeJ 6.3.5.2 F glutamine amidotransferase
DNIMLDDP_00109 1.9e-59 yneR
DNIMLDDP_00110 2.1e-101 qorB 1.6.5.2 GM NmrA-like family
DNIMLDDP_00111 1.3e-159 akr5f 1.1.1.346 S reductase
DNIMLDDP_00112 7.1e-145 K Transcriptional regulator
DNIMLDDP_00113 2.3e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
DNIMLDDP_00114 2.4e-160 ypuA S Protein of unknown function (DUF1002)
DNIMLDDP_00115 6.6e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DNIMLDDP_00116 5.1e-153 tesE Q hydratase
DNIMLDDP_00117 3.7e-119 S Alpha beta hydrolase
DNIMLDDP_00118 1.5e-65 lacA S transferase hexapeptide repeat
DNIMLDDP_00119 7.8e-77 S Peptidase propeptide and YPEB domain
DNIMLDDP_00120 1.4e-213 T GHKL domain
DNIMLDDP_00121 1.1e-108 T Transcriptional regulatory protein, C terminal
DNIMLDDP_00122 7e-19 1.1.1.193, 3.5.4.26 H RibD C-terminal domain
DNIMLDDP_00123 3.3e-85 L PFAM transposase IS200-family protein
DNIMLDDP_00125 1.4e-51 L PFAM Integrase catalytic region
DNIMLDDP_00126 9.5e-39 S Cytochrome B5
DNIMLDDP_00127 7.2e-158 endA V DNA/RNA non-specific endonuclease
DNIMLDDP_00128 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNIMLDDP_00129 2.3e-41 ybaN S Protein of unknown function (DUF454)
DNIMLDDP_00130 7e-72 S Protein of unknown function (DUF3290)
DNIMLDDP_00131 1.5e-112 yviA S Protein of unknown function (DUF421)
DNIMLDDP_00132 1.5e-163 S Alpha/beta hydrolase of unknown function (DUF915)
DNIMLDDP_00133 2.9e-17
DNIMLDDP_00134 2.1e-90 ntd 2.4.2.6 F Nucleoside
DNIMLDDP_00135 3.3e-152 3.1.3.102, 3.1.3.104 S hydrolase
DNIMLDDP_00136 8.9e-41 yrvD S Pfam:DUF1049
DNIMLDDP_00138 1.1e-139 L Belongs to the 'phage' integrase family
DNIMLDDP_00140 1.6e-89
DNIMLDDP_00143 7e-45
DNIMLDDP_00145 1.1e-18
DNIMLDDP_00148 1.8e-79 3.4.21.88 K Peptidase S24-like
DNIMLDDP_00149 2.8e-10 K Helix-turn-helix XRE-family like proteins
DNIMLDDP_00153 7.8e-54
DNIMLDDP_00154 3.3e-20
DNIMLDDP_00157 4.2e-116 L DnaD domain protein
DNIMLDDP_00158 1.4e-86 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
DNIMLDDP_00159 6e-137 L Belongs to the 'phage' integrase family
DNIMLDDP_00161 1.8e-09
DNIMLDDP_00162 3.3e-40 S HNH endonuclease
DNIMLDDP_00164 4.4e-68
DNIMLDDP_00165 2.4e-133
DNIMLDDP_00170 1.3e-71 XK27_00160 S Domain of unknown function (DUF5052)
DNIMLDDP_00172 4.2e-83 arpU S Phage transcriptional regulator, ArpU family
DNIMLDDP_00173 9.1e-12
DNIMLDDP_00174 1.2e-08
DNIMLDDP_00175 8.6e-156 L HNH nucleases
DNIMLDDP_00176 5.8e-77 terS L Phage terminase, small subunit
DNIMLDDP_00177 0.0 terL S overlaps another CDS with the same product name
DNIMLDDP_00181 3.2e-239 S Phage portal protein
DNIMLDDP_00182 1.4e-113 pi136 S Caudovirus prohead serine protease
DNIMLDDP_00183 2.8e-205 S Phage capsid family
DNIMLDDP_00184 5.1e-69 S Phage gp6-like head-tail connector protein
DNIMLDDP_00185 1.5e-39 S Phage head-tail joining protein
DNIMLDDP_00186 7.2e-62 S Bacteriophage HK97-gp10, putative tail-component
DNIMLDDP_00187 4.1e-74
DNIMLDDP_00188 2.9e-108
DNIMLDDP_00189 1.6e-23
DNIMLDDP_00190 1.5e-19
DNIMLDDP_00191 0.0 M Phage tail tape measure protein TP901
DNIMLDDP_00192 2.1e-157 S Phage tail protein
DNIMLDDP_00193 1e-260 3.4.24.40 M Peptidase family M23
DNIMLDDP_00195 3.9e-31 S Domain of unknown function (DUF2479)
DNIMLDDP_00201 2.5e-34
DNIMLDDP_00202 1e-56 S Bacteriophage holin of superfamily 6 (Holin_LLH)
DNIMLDDP_00203 3.6e-194 ps461 3.5.1.104 M hydrolase, family 25
DNIMLDDP_00204 6.4e-32 ywzB S Protein of unknown function (DUF1146)
DNIMLDDP_00205 5e-75 sirR K Helix-turn-helix diphteria tox regulatory element
DNIMLDDP_00206 9.1e-95 L PFAM Integrase catalytic region
DNIMLDDP_00207 5.7e-29
DNIMLDDP_00208 3.8e-130 mltD CBM50 M NlpC P60 family protein
DNIMLDDP_00210 6.5e-57
DNIMLDDP_00211 6e-208 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
DNIMLDDP_00212 1.1e-218 EG GntP family permease
DNIMLDDP_00213 8.5e-84 KT Putative sugar diacid recognition
DNIMLDDP_00214 1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DNIMLDDP_00215 8.5e-218 patA 2.6.1.1 E Aminotransferase
DNIMLDDP_00216 8e-140 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DNIMLDDP_00217 6.5e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DNIMLDDP_00218 5.2e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
DNIMLDDP_00219 2.6e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
DNIMLDDP_00220 2.6e-244 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DNIMLDDP_00221 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
DNIMLDDP_00222 4.6e-180 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DNIMLDDP_00223 3.1e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DNIMLDDP_00224 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DNIMLDDP_00225 1.9e-116 S Repeat protein
DNIMLDDP_00226 2.9e-122 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
DNIMLDDP_00227 7.6e-224 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
DNIMLDDP_00228 7.5e-58 XK27_04120 S Putative amino acid metabolism
DNIMLDDP_00229 4.6e-216 iscS 2.8.1.7 E Aminotransferase class V
DNIMLDDP_00230 3.2e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DNIMLDDP_00232 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
DNIMLDDP_00233 4.2e-32 cspA K Cold shock protein
DNIMLDDP_00234 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DNIMLDDP_00235 2.3e-35 divIVA D DivIVA domain protein
DNIMLDDP_00236 2.2e-145 ylmH S S4 domain protein
DNIMLDDP_00237 3.2e-40 yggT S YGGT family
DNIMLDDP_00238 9.4e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DNIMLDDP_00239 3.5e-222 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DNIMLDDP_00240 2.5e-253 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
DNIMLDDP_00241 1e-140 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
DNIMLDDP_00242 2.8e-202 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DNIMLDDP_00243 2.1e-260 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DNIMLDDP_00244 2.2e-179 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DNIMLDDP_00245 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
DNIMLDDP_00246 1.3e-55 ftsL D Cell division protein FtsL
DNIMLDDP_00247 8.3e-171 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DNIMLDDP_00248 3.1e-77 mraZ K Belongs to the MraZ family
DNIMLDDP_00249 1.7e-57
DNIMLDDP_00250 1.2e-10 S Protein of unknown function (DUF4044)
DNIMLDDP_00251 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
DNIMLDDP_00252 3e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DNIMLDDP_00253 5.2e-156 rrmA 2.1.1.187 H Methyltransferase
DNIMLDDP_00254 5.6e-181 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
DNIMLDDP_00256 2.9e-75 E Zn peptidase
DNIMLDDP_00257 5.6e-72 EGP Major facilitator Superfamily
DNIMLDDP_00258 4.9e-226 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
DNIMLDDP_00259 2.9e-96 S reductase
DNIMLDDP_00261 4.7e-88 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DNIMLDDP_00262 6.5e-179 ABC-SBP S ABC transporter
DNIMLDDP_00263 6.8e-84 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
DNIMLDDP_00265 1.6e-214 htrA 3.4.21.107 O serine protease
DNIMLDDP_00266 2.3e-153 vicX 3.1.26.11 S domain protein
DNIMLDDP_00267 7.8e-149 yycI S YycH protein
DNIMLDDP_00268 2.4e-245 yycH S YycH protein
DNIMLDDP_00269 0.0 vicK 2.7.13.3 T Histidine kinase
DNIMLDDP_00270 3.1e-130 K response regulator
DNIMLDDP_00273 7.6e-308 lmrA 3.6.3.44 V ABC transporter
DNIMLDDP_00274 6.8e-72 K helix_turn_helix multiple antibiotic resistance protein
DNIMLDDP_00276 7.5e-96 Z012_01130 S Fic/DOC family
DNIMLDDP_00278 6.9e-156 S Polyphosphate nucleotide phosphotransferase, PPK2 family
DNIMLDDP_00279 9.1e-61
DNIMLDDP_00280 2.6e-206 yttB EGP Major facilitator Superfamily
DNIMLDDP_00281 1.8e-235 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
DNIMLDDP_00282 2e-74 rplI J Binds to the 23S rRNA
DNIMLDDP_00283 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
DNIMLDDP_00284 4.8e-99 deoR K sugar-binding domain protein
DNIMLDDP_00285 1.2e-46 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DNIMLDDP_00286 8.4e-32 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DNIMLDDP_00287 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DNIMLDDP_00288 4.8e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DNIMLDDP_00289 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
DNIMLDDP_00290 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNIMLDDP_00291 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DNIMLDDP_00292 1.8e-204 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DNIMLDDP_00293 1.7e-34 yaaA S S4 domain protein YaaA
DNIMLDDP_00294 5.7e-203 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DNIMLDDP_00295 1.1e-250 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DNIMLDDP_00296 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
DNIMLDDP_00297 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
DNIMLDDP_00298 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DNIMLDDP_00299 6.3e-129 jag S R3H domain protein
DNIMLDDP_00300 2.8e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DNIMLDDP_00301 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
DNIMLDDP_00302 0.0 asnB 6.3.5.4 E Asparagine synthase
DNIMLDDP_00303 9.3e-289 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DNIMLDDP_00304 6.4e-248 yxbA 6.3.1.12 S ATP-grasp enzyme
DNIMLDDP_00305 2.9e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DNIMLDDP_00306 2.5e-14 2.3.1.183 M Acetyltransferase GNAT family
DNIMLDDP_00307 1.4e-49 2.3.1.183 M Acetyltransferase GNAT family
DNIMLDDP_00309 1.4e-170 glsA 3.5.1.2 E Belongs to the glutaminase family
DNIMLDDP_00310 1.5e-252 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DNIMLDDP_00311 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DNIMLDDP_00312 6.7e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
DNIMLDDP_00313 8.5e-295 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DNIMLDDP_00315 3.2e-59 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DNIMLDDP_00316 1.1e-209 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DNIMLDDP_00317 3.2e-62 L Toxic component of a toxin-antitoxin (TA) module
DNIMLDDP_00318 3.1e-251 U Belongs to the purine-cytosine permease (2.A.39) family
DNIMLDDP_00319 2.3e-242 codA 3.5.4.1 F cytosine deaminase
DNIMLDDP_00320 1.9e-144 tesE Q hydratase
DNIMLDDP_00321 6.9e-113 S (CBS) domain
DNIMLDDP_00322 3.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DNIMLDDP_00323 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DNIMLDDP_00324 2.1e-39 yabO J S4 domain protein
DNIMLDDP_00325 1.3e-55 divIC D Septum formation initiator
DNIMLDDP_00326 3.7e-63 yabR J RNA binding
DNIMLDDP_00327 3.1e-251 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DNIMLDDP_00328 1.3e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DNIMLDDP_00329 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DNIMLDDP_00330 9.7e-169 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DNIMLDDP_00331 2.4e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DNIMLDDP_00332 2.8e-290 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
DNIMLDDP_00334 5.2e-146 L Transposase and inactivated derivatives IS30 family
DNIMLDDP_00336 1.6e-26
DNIMLDDP_00338 8.3e-96 V VanZ like family
DNIMLDDP_00339 7.1e-145 K LysR substrate binding domain
DNIMLDDP_00340 7.3e-173 MA20_14895 S Conserved hypothetical protein 698
DNIMLDDP_00345 2.8e-10 L Resolvase, N terminal domain
DNIMLDDP_00346 3.4e-57 L Resolvase, N terminal domain
DNIMLDDP_00348 3.3e-09
DNIMLDDP_00350 3.6e-20 S DNA binding domain, excisionase family
DNIMLDDP_00351 1.5e-196 L Belongs to the 'phage' integrase family
DNIMLDDP_00352 1.1e-84
DNIMLDDP_00353 5.1e-116 yfbR S HD containing hydrolase-like enzyme
DNIMLDDP_00354 1.5e-13
DNIMLDDP_00355 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DNIMLDDP_00356 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DNIMLDDP_00357 3.2e-245 steT E amino acid
DNIMLDDP_00358 1.9e-161 rapZ S Displays ATPase and GTPase activities
DNIMLDDP_00359 2.1e-185 ybhK S Required for morphogenesis under gluconeogenic growth conditions
DNIMLDDP_00360 1.5e-169 whiA K May be required for sporulation
DNIMLDDP_00362 8.8e-15
DNIMLDDP_00363 8.8e-54 glpT G Major Facilitator Superfamily
DNIMLDDP_00364 2.9e-103 glpT G Major Facilitator Superfamily
DNIMLDDP_00365 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DNIMLDDP_00367 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DNIMLDDP_00368 1.7e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
DNIMLDDP_00369 1.8e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DNIMLDDP_00370 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DNIMLDDP_00371 1.4e-243 yifK E Amino acid permease
DNIMLDDP_00372 2.4e-292 clcA P chloride
DNIMLDDP_00373 1.8e-34 secG U Preprotein translocase
DNIMLDDP_00374 5.9e-143 est 3.1.1.1 S Serine aminopeptidase, S33
DNIMLDDP_00375 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
DNIMLDDP_00376 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DNIMLDDP_00377 4.1e-104 yxjI
DNIMLDDP_00378 9e-135 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DNIMLDDP_00379 1.1e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
DNIMLDDP_00380 2e-80 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
DNIMLDDP_00381 4.4e-86 K Acetyltransferase (GNAT) domain
DNIMLDDP_00382 3.8e-75 S PAS domain
DNIMLDDP_00383 2.7e-102 dnaQ 2.7.7.7 L DNA polymerase III
DNIMLDDP_00384 1e-167 murB 1.3.1.98 M Cell wall formation
DNIMLDDP_00385 2.5e-164 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNIMLDDP_00386 3e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
DNIMLDDP_00387 3.4e-247 fucP G Major Facilitator Superfamily
DNIMLDDP_00388 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DNIMLDDP_00389 3.8e-125 ybbR S YbbR-like protein
DNIMLDDP_00390 1.2e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DNIMLDDP_00391 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DNIMLDDP_00392 0.0 rafA 3.2.1.22 G alpha-galactosidase
DNIMLDDP_00393 5.7e-186 galR K Periplasmic binding protein-like domain
DNIMLDDP_00394 6.4e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
DNIMLDDP_00395 4.4e-118 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DNIMLDDP_00396 2.4e-87 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
DNIMLDDP_00397 2.5e-46 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
DNIMLDDP_00398 5.2e-148 f42a O Band 7 protein
DNIMLDDP_00399 2.9e-254 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
DNIMLDDP_00400 1e-153 yitU 3.1.3.104 S hydrolase
DNIMLDDP_00401 9.2e-39 S Cytochrome B5
DNIMLDDP_00402 3.4e-115 nreC K PFAM regulatory protein LuxR
DNIMLDDP_00403 8.8e-159 hipB K Helix-turn-helix
DNIMLDDP_00404 1.1e-56 yitW S Iron-sulfur cluster assembly protein
DNIMLDDP_00405 1.2e-271 sufB O assembly protein SufB
DNIMLDDP_00406 3.6e-79 nifU C SUF system FeS assembly protein, NifU family
DNIMLDDP_00407 5.2e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DNIMLDDP_00408 1.1e-239 sufD O FeS assembly protein SufD
DNIMLDDP_00409 3.2e-144 sufC O FeS assembly ATPase SufC
DNIMLDDP_00410 2.8e-31 feoA P FeoA domain
DNIMLDDP_00411 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
DNIMLDDP_00412 2.8e-268 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
DNIMLDDP_00413 2.9e-156 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DNIMLDDP_00414 6.7e-60 ydiI Q Thioesterase superfamily
DNIMLDDP_00415 7.1e-109 yvrI K sigma factor activity
DNIMLDDP_00416 3.4e-206 G Transporter, major facilitator family protein
DNIMLDDP_00417 0.0 S Bacterial membrane protein YfhO
DNIMLDDP_00418 7.3e-103 T Ion transport 2 domain protein
DNIMLDDP_00419 9.9e-177 rihA F Inosine-uridine preferring nucleoside hydrolase
DNIMLDDP_00421 0.0 L PLD-like domain
DNIMLDDP_00422 1.3e-64 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
DNIMLDDP_00423 2.3e-35
DNIMLDDP_00424 0.0 L Type III restriction enzyme, res subunit
DNIMLDDP_00425 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
DNIMLDDP_00426 1.9e-237 ktrB P Potassium uptake protein
DNIMLDDP_00427 9.1e-116 ktrA P domain protein
DNIMLDDP_00428 1.9e-79 Q Methyltransferase
DNIMLDDP_00429 3.1e-229 mntH P H( )-stimulated, divalent metal cation uptake system
DNIMLDDP_00430 3.1e-178 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
DNIMLDDP_00431 1.8e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
DNIMLDDP_00432 4.6e-94 S NADPH-dependent FMN reductase
DNIMLDDP_00433 2e-178 MA20_14895 S Conserved hypothetical protein 698
DNIMLDDP_00434 3e-133 I alpha/beta hydrolase fold
DNIMLDDP_00435 4e-143 lsa S ABC transporter
DNIMLDDP_00436 6.1e-102 lsa S ABC transporter
DNIMLDDP_00437 3e-181 yfeX P Peroxidase
DNIMLDDP_00438 1.6e-233 arcD S C4-dicarboxylate anaerobic carrier
DNIMLDDP_00439 9.5e-258 ytjP 3.5.1.18 E Dipeptidase
DNIMLDDP_00440 6.3e-216 uhpT EGP Major facilitator Superfamily
DNIMLDDP_00441 6.5e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
DNIMLDDP_00442 5.3e-131 ponA V Beta-lactamase enzyme family
DNIMLDDP_00443 6e-230 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DNIMLDDP_00444 5.3e-72
DNIMLDDP_00445 2.3e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
DNIMLDDP_00446 2.2e-21
DNIMLDDP_00447 9.3e-264 S Uncharacterized protein conserved in bacteria (DUF2252)
DNIMLDDP_00448 2.6e-166 L transposase, IS605 OrfB family
DNIMLDDP_00449 1.1e-294 L PFAM plasmid pRiA4b ORF-3 family protein
DNIMLDDP_00450 1.9e-205 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
DNIMLDDP_00451 6.6e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DNIMLDDP_00452 9.7e-158 mleR K LysR family
DNIMLDDP_00453 3.1e-303 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
DNIMLDDP_00454 5.2e-259 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
DNIMLDDP_00455 6.9e-267 frdC 1.3.5.4 C FAD binding domain
DNIMLDDP_00456 4.9e-252 yflS P Sodium:sulfate symporter transmembrane region
DNIMLDDP_00457 6.9e-228 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
DNIMLDDP_00458 3.9e-95 ribA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DNIMLDDP_00459 3.7e-114 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
DNIMLDDP_00460 9.6e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DNIMLDDP_00461 5.1e-128 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
DNIMLDDP_00462 1.9e-172 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DNIMLDDP_00463 7.3e-247 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DNIMLDDP_00464 5e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
DNIMLDDP_00465 5.1e-82 K LysR substrate binding domain
DNIMLDDP_00466 9.4e-17 K LysR substrate binding domain
DNIMLDDP_00467 1.6e-52 azlD S branched-chain amino acid
DNIMLDDP_00468 2.7e-139 azlC E AzlC protein
DNIMLDDP_00469 2.4e-201 hpk31 2.7.13.3 T Histidine kinase
DNIMLDDP_00470 3.8e-125 K response regulator
DNIMLDDP_00471 4.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DNIMLDDP_00472 4e-170 deoR K sugar-binding domain protein
DNIMLDDP_00473 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
DNIMLDDP_00474 3.2e-234 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
DNIMLDDP_00475 4.5e-235 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
DNIMLDDP_00476 3.4e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DNIMLDDP_00477 3.1e-136 XK27_01040 S Protein of unknown function (DUF1129)
DNIMLDDP_00478 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DNIMLDDP_00479 1.2e-31 yyzM S Bacterial protein of unknown function (DUF951)
DNIMLDDP_00480 5e-154 spo0J K Belongs to the ParB family
DNIMLDDP_00481 3.6e-140 soj D Sporulation initiation inhibitor
DNIMLDDP_00482 1.5e-143 noc K Belongs to the ParB family
DNIMLDDP_00483 3.7e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
DNIMLDDP_00484 7.7e-163 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
DNIMLDDP_00485 6.6e-170 rihC 3.2.2.1 F Nucleoside
DNIMLDDP_00486 1.3e-218 nupG F Nucleoside transporter
DNIMLDDP_00487 1.6e-220 cycA E Amino acid permease
DNIMLDDP_00488 1.9e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNIMLDDP_00489 2.2e-263 glnP P ABC transporter
DNIMLDDP_00490 1.2e-249 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DNIMLDDP_00491 6.3e-37 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DNIMLDDP_00492 2.4e-95 yqeG S HAD phosphatase, family IIIA
DNIMLDDP_00493 2.4e-217 yqeH S Ribosome biogenesis GTPase YqeH
DNIMLDDP_00494 1.9e-47 yhbY J RNA-binding protein
DNIMLDDP_00495 6.9e-121 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DNIMLDDP_00496 2.8e-111 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
DNIMLDDP_00497 4.9e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DNIMLDDP_00498 1.1e-135 yqeM Q Methyltransferase
DNIMLDDP_00499 6.9e-209 ylbM S Belongs to the UPF0348 family
DNIMLDDP_00500 4.9e-99 yceD S Uncharacterized ACR, COG1399
DNIMLDDP_00501 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
DNIMLDDP_00502 1.5e-121 K response regulator
DNIMLDDP_00503 4.1e-278 arlS 2.7.13.3 T Histidine kinase
DNIMLDDP_00504 4.8e-266 yjeM E Amino Acid
DNIMLDDP_00505 1.8e-232 V MatE
DNIMLDDP_00506 7.4e-68 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
DNIMLDDP_00507 1.3e-168 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DNIMLDDP_00508 8e-42 acyP 3.6.1.7 C Belongs to the acylphosphatase family
DNIMLDDP_00509 4.8e-145 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNIMLDDP_00510 5.3e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
DNIMLDDP_00511 6.7e-59 yodB K Transcriptional regulator, HxlR family
DNIMLDDP_00512 2.3e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DNIMLDDP_00513 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DNIMLDDP_00514 3.6e-114 rlpA M PFAM NLP P60 protein
DNIMLDDP_00515 8e-117 udk 2.7.1.48 F Cytidine monophosphokinase
DNIMLDDP_00516 5.3e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DNIMLDDP_00517 3.1e-68 yneR S Belongs to the HesB IscA family
DNIMLDDP_00518 0.0 S membrane
DNIMLDDP_00519 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
DNIMLDDP_00520 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
DNIMLDDP_00521 5.2e-101 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DNIMLDDP_00522 3.9e-76 gluP 3.4.21.105 S Peptidase, S54 family
DNIMLDDP_00523 2.5e-20 gluP 3.4.21.105 S Peptidase, S54 family
DNIMLDDP_00524 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
DNIMLDDP_00525 5.6e-183 glk 2.7.1.2 G Glucokinase
DNIMLDDP_00526 1e-66 yqhL P Rhodanese-like protein
DNIMLDDP_00527 5.9e-22 S Protein of unknown function (DUF3042)
DNIMLDDP_00528 7e-175 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DNIMLDDP_00529 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
DNIMLDDP_00530 4.5e-296 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DNIMLDDP_00531 1.5e-92 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
DNIMLDDP_00532 3.9e-31 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
DNIMLDDP_00533 6.1e-42 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
DNIMLDDP_00534 3.9e-12
DNIMLDDP_00535 7.9e-99 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DNIMLDDP_00536 4.8e-51 S Iron-sulfur cluster assembly protein
DNIMLDDP_00537 9.7e-150
DNIMLDDP_00538 3.3e-181
DNIMLDDP_00539 1.3e-85 dut S Protein conserved in bacteria
DNIMLDDP_00543 2.1e-103 K Transcriptional regulator
DNIMLDDP_00544 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
DNIMLDDP_00545 2.4e-53 ysxB J Cysteine protease Prp
DNIMLDDP_00546 1.3e-44 rpmA J Belongs to the bacterial ribosomal protein bL27 family
DNIMLDDP_00547 8.9e-130 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DNIMLDDP_00548 1.6e-199 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DNIMLDDP_00549 1e-114 J 2'-5' RNA ligase superfamily
DNIMLDDP_00550 2.2e-70 yqhY S Asp23 family, cell envelope-related function
DNIMLDDP_00551 4.7e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DNIMLDDP_00552 1.4e-148 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DNIMLDDP_00553 6.5e-214 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DNIMLDDP_00554 1.3e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DNIMLDDP_00555 1.4e-153 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DNIMLDDP_00556 3.4e-149 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
DNIMLDDP_00557 1.6e-76 argR K Regulates arginine biosynthesis genes
DNIMLDDP_00558 5.5e-263 recN L May be involved in recombinational repair of damaged DNA
DNIMLDDP_00559 4.2e-53
DNIMLDDP_00560 3.5e-114 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
DNIMLDDP_00561 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DNIMLDDP_00562 9.6e-209 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DNIMLDDP_00563 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DNIMLDDP_00564 6.7e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DNIMLDDP_00565 3.1e-248 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DNIMLDDP_00566 7.9e-129 stp 3.1.3.16 T phosphatase
DNIMLDDP_00567 0.0 KLT serine threonine protein kinase
DNIMLDDP_00568 8.5e-162 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
DNIMLDDP_00569 4.7e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
DNIMLDDP_00570 2.9e-119 thiN 2.7.6.2 H thiamine pyrophosphokinase
DNIMLDDP_00571 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
DNIMLDDP_00572 4.7e-58 asp S Asp23 family, cell envelope-related function
DNIMLDDP_00573 0.0 yloV S DAK2 domain fusion protein YloV
DNIMLDDP_00574 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DNIMLDDP_00575 1e-187 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
DNIMLDDP_00576 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DNIMLDDP_00577 1.2e-131 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DNIMLDDP_00578 0.0 smc D Required for chromosome condensation and partitioning
DNIMLDDP_00579 3.8e-178 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DNIMLDDP_00580 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DNIMLDDP_00581 1.8e-249 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DNIMLDDP_00582 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
DNIMLDDP_00583 5.4e-40 ylqC S Belongs to the UPF0109 family
DNIMLDDP_00584 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DNIMLDDP_00585 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
DNIMLDDP_00586 2.6e-261 yfnA E amino acid
DNIMLDDP_00587 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DNIMLDDP_00589 1.2e-260 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DNIMLDDP_00590 2.1e-185 yegS 2.7.1.107 G Lipid kinase
DNIMLDDP_00591 1.8e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DNIMLDDP_00592 1.6e-277 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DNIMLDDP_00593 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DNIMLDDP_00594 2.8e-202 camS S sex pheromone
DNIMLDDP_00595 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DNIMLDDP_00596 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
DNIMLDDP_00597 1.1e-209 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
DNIMLDDP_00598 2.3e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DNIMLDDP_00599 3e-113 acmC 3.2.1.96 NU mannosyl-glycoprotein
DNIMLDDP_00600 8e-140 IQ reductase
DNIMLDDP_00601 1.6e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
DNIMLDDP_00602 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DNIMLDDP_00603 5.5e-141 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DNIMLDDP_00604 6.3e-140 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNIMLDDP_00605 7.3e-150 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNIMLDDP_00606 4.2e-139 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DNIMLDDP_00607 1.1e-62 rplQ J Ribosomal protein L17
DNIMLDDP_00608 2.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNIMLDDP_00609 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DNIMLDDP_00610 6.2e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DNIMLDDP_00611 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
DNIMLDDP_00612 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DNIMLDDP_00613 4.4e-123 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DNIMLDDP_00614 1.7e-238 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DNIMLDDP_00615 8.9e-64 rplO J Binds to the 23S rRNA
DNIMLDDP_00616 2.9e-24 rpmD J Ribosomal protein L30
DNIMLDDP_00617 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DNIMLDDP_00618 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DNIMLDDP_00619 2.1e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DNIMLDDP_00620 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DNIMLDDP_00621 4e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DNIMLDDP_00622 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DNIMLDDP_00623 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DNIMLDDP_00624 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DNIMLDDP_00625 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DNIMLDDP_00626 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
DNIMLDDP_00627 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DNIMLDDP_00628 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DNIMLDDP_00629 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DNIMLDDP_00630 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DNIMLDDP_00631 1.6e-149 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DNIMLDDP_00632 4.9e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DNIMLDDP_00633 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
DNIMLDDP_00634 4.3e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DNIMLDDP_00635 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
DNIMLDDP_00636 1.3e-220 arcT 2.6.1.1 E Aminotransferase
DNIMLDDP_00637 8e-255 E Arginine ornithine antiporter
DNIMLDDP_00638 9e-281 yjeM E Amino Acid
DNIMLDDP_00639 9.9e-142 yihY S Belongs to the UPF0761 family
DNIMLDDP_00640 6.6e-34 S Protein of unknown function (DUF2922)
DNIMLDDP_00641 4.9e-31
DNIMLDDP_00642 1.2e-135 recX 2.4.1.337 GT4 S Regulatory protein RecX
DNIMLDDP_00643 4.3e-146 cps1D M Domain of unknown function (DUF4422)
DNIMLDDP_00644 2.5e-172 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
DNIMLDDP_00645 5e-119 rfbP 2.7.8.6 M Bacterial sugar transferase
DNIMLDDP_00646 0.0 2.7.7.6 M Peptidase family M23
DNIMLDDP_00647 0.0 G Peptidase_C39 like family
DNIMLDDP_00648 1.8e-24
DNIMLDDP_00649 3.3e-219 glf 5.4.99.9 M UDP-galactopyranose mutase
DNIMLDDP_00650 1.8e-209 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
DNIMLDDP_00651 4.7e-76 M transferase activity, transferring glycosyl groups
DNIMLDDP_00652 7.7e-89 cps3F
DNIMLDDP_00653 3.9e-28 M biosynthesis protein
DNIMLDDP_00654 3.8e-75 rgpB GT2 M Glycosyl transferase family 2
DNIMLDDP_00655 1.4e-67 S Glycosyltransferase like family
DNIMLDDP_00656 2e-81 glfT1 1.1.1.133 S Glycosyltransferase like family 2
DNIMLDDP_00657 2.8e-68 S Acyltransferase family
DNIMLDDP_00658 2.7e-11 S Acyltransferase family
DNIMLDDP_00659 5.1e-79
DNIMLDDP_00660 2.1e-145 rfbJ M Glycosyl transferase family 2
DNIMLDDP_00661 1.6e-135
DNIMLDDP_00662 0.0 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DNIMLDDP_00663 2.2e-162 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DNIMLDDP_00664 4.2e-109 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
DNIMLDDP_00665 5.9e-211 EGP Major facilitator Superfamily
DNIMLDDP_00666 3.9e-135 V ABC transporter
DNIMLDDP_00667 9e-106
DNIMLDDP_00668 4e-14
DNIMLDDP_00669 7.1e-63
DNIMLDDP_00670 1.5e-194 lplA 6.3.1.20 H Lipoate-protein ligase
DNIMLDDP_00671 6.6e-81 uspA T universal stress protein
DNIMLDDP_00672 0.0 tetP J elongation factor G
DNIMLDDP_00673 2.9e-165 GK ROK family
DNIMLDDP_00674 1.6e-236 brnQ U Component of the transport system for branched-chain amino acids
DNIMLDDP_00675 3.2e-138 aroD S Serine hydrolase (FSH1)
DNIMLDDP_00676 5.5e-237 yagE E amino acid
DNIMLDDP_00677 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
DNIMLDDP_00678 4.7e-126 gntR K UbiC transcription regulator-associated domain protein
DNIMLDDP_00679 1.6e-85 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DNIMLDDP_00680 2.6e-269 pipD E Dipeptidase
DNIMLDDP_00681 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
DNIMLDDP_00682 0.0 yfiC V ABC transporter
DNIMLDDP_00683 8.3e-286 lmrA V ABC transporter, ATP-binding protein
DNIMLDDP_00684 1.7e-17 K Winged helix DNA-binding domain
DNIMLDDP_00685 1.9e-179 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNIMLDDP_00686 2.9e-19 S PFAM Archaeal ATPase
DNIMLDDP_00687 5.9e-73 S ECF transporter, substrate-specific component
DNIMLDDP_00688 9.8e-51 S Domain of unknown function (DUF4430)
DNIMLDDP_00689 8.6e-20 cnrT EG PFAM EamA-like transporter family
DNIMLDDP_00690 5.6e-52
DNIMLDDP_00691 0.0 oatA I Acyltransferase
DNIMLDDP_00692 1.8e-78 K Transcriptional regulator
DNIMLDDP_00693 1.1e-147 XK27_02985 S Cof-like hydrolase
DNIMLDDP_00694 1.3e-76 lytE M Lysin motif
DNIMLDDP_00696 1.6e-134 K response regulator
DNIMLDDP_00697 2.6e-272 yclK 2.7.13.3 T Histidine kinase
DNIMLDDP_00698 4.1e-153 glcU U sugar transport
DNIMLDDP_00699 9.6e-96 lacA 2.3.1.79 S Transferase hexapeptide repeat
DNIMLDDP_00700 6.5e-262 pgi 5.3.1.9 G Belongs to the GPI family
DNIMLDDP_00701 1e-25
DNIMLDDP_00703 3.1e-30 xylB 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
DNIMLDDP_00704 3.6e-154 KT YcbB domain
DNIMLDDP_00705 7.6e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DNIMLDDP_00706 2.1e-171 arcC 2.7.2.2 E Belongs to the carbamate kinase family
DNIMLDDP_00707 9.6e-161 EG EamA-like transporter family
DNIMLDDP_00708 8.4e-39 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DNIMLDDP_00709 4.5e-48 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DNIMLDDP_00710 0.0 copA 3.6.3.54 P P-type ATPase
DNIMLDDP_00711 1.6e-85
DNIMLDDP_00713 1.8e-56
DNIMLDDP_00714 1.3e-109 yjcE P Sodium proton antiporter
DNIMLDDP_00715 4.6e-101 yjcE P Sodium proton antiporter
DNIMLDDP_00717 5.8e-91
DNIMLDDP_00718 6.4e-263 M domain protein
DNIMLDDP_00719 2.9e-158 M domain protein
DNIMLDDP_00720 3.1e-99 epsB M biosynthesis protein
DNIMLDDP_00721 1e-107 ywqD 2.7.10.1 D Capsular exopolysaccharide family
DNIMLDDP_00722 8.9e-49 pglC M Bacterial sugar transferase
DNIMLDDP_00723 1.2e-86 GT4 G Glycosyl transferase 4-like
DNIMLDDP_00724 3e-67 sacB GT2,GT4 M Stealth protein CR2, conserved region 2
DNIMLDDP_00725 5.4e-42 M cog cog1442
DNIMLDDP_00727 2.2e-72 cps2I S Psort location CytoplasmicMembrane, score
DNIMLDDP_00728 1.2e-28 M Glycosyltransferase sugar-binding region containing DXD motif
DNIMLDDP_00729 1e-27 M PFAM Glycosyl transferase family 2
DNIMLDDP_00730 7.2e-29 S COG0463 Glycosyltransferases involved in cell wall biogenesis
DNIMLDDP_00731 1e-50 S Glycosyltransferase, group 2 family protein
DNIMLDDP_00733 9.1e-30 S Acyltransferase family
DNIMLDDP_00734 0.0 gtfC 2.4.1.5 GH13 G Glycosyl hydrolase family 70
DNIMLDDP_00735 1.5e-282 2.4.1.5 GH13 G Glycosyl hydrolase family 70
DNIMLDDP_00736 0.0 trxB2 1.8.1.9 C Thioredoxin domain
DNIMLDDP_00737 1.2e-105 ahpC 1.11.1.15 O Peroxiredoxin
DNIMLDDP_00738 4.1e-140 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
DNIMLDDP_00739 1.1e-121 sdaAB 4.3.1.17 E Serine dehydratase beta chain
DNIMLDDP_00742 2.7e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DNIMLDDP_00743 1.7e-167 T Calcineurin-like phosphoesterase superfamily domain
DNIMLDDP_00744 7e-223 mdtG EGP Major facilitator Superfamily
DNIMLDDP_00745 5.7e-129 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
DNIMLDDP_00746 4.4e-53 yxjG_1 E methionine synthase, vitamin-B12 independent
DNIMLDDP_00747 4.4e-158 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
DNIMLDDP_00748 1.2e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DNIMLDDP_00749 0.0 lacZ 3.2.1.23 G -beta-galactosidase
DNIMLDDP_00750 0.0 lacS G Transporter
DNIMLDDP_00751 2.8e-185 lacR K Transcriptional regulator
DNIMLDDP_00752 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DNIMLDDP_00753 3.3e-09
DNIMLDDP_00754 4.7e-38
DNIMLDDP_00755 3.3e-160 xth 3.1.11.2 L exodeoxyribonuclease III
DNIMLDDP_00756 1.2e-52 S Mazg nucleotide pyrophosphohydrolase
DNIMLDDP_00757 3.6e-32
DNIMLDDP_00758 0.0 FbpA K Fibronectin-binding protein
DNIMLDDP_00759 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
DNIMLDDP_00760 1.4e-206 carA 6.3.5.5 F Belongs to the CarA family
DNIMLDDP_00761 4.5e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DNIMLDDP_00762 1.7e-73 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DNIMLDDP_00763 5.6e-65 esbA S Family of unknown function (DUF5322)
DNIMLDDP_00764 9e-71 rnhA 3.1.26.4 L Ribonuclease HI
DNIMLDDP_00765 7.3e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
DNIMLDDP_00766 8e-82 F Belongs to the NrdI family
DNIMLDDP_00767 1.2e-42 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
DNIMLDDP_00768 3.2e-101 ypsA S Belongs to the UPF0398 family
DNIMLDDP_00769 2.4e-115 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
DNIMLDDP_00770 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
DNIMLDDP_00771 1.3e-160 EG EamA-like transporter family
DNIMLDDP_00772 8.1e-123 dnaD L DnaD domain protein
DNIMLDDP_00773 6.9e-87 ypmB S Protein conserved in bacteria
DNIMLDDP_00774 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
DNIMLDDP_00775 6.3e-171 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
DNIMLDDP_00776 1.7e-163 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
DNIMLDDP_00777 1.8e-212 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
DNIMLDDP_00778 6.4e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
DNIMLDDP_00779 2.5e-86 S Protein of unknown function (DUF1440)
DNIMLDDP_00780 1.3e-73 M Glycosyltransferase like family 2
DNIMLDDP_00781 5e-159 M family 8
DNIMLDDP_00782 3.5e-188 nss M transferase activity, transferring glycosyl groups
DNIMLDDP_00783 4.9e-77 S glycosyl transferase family 2
DNIMLDDP_00784 8.1e-88 M family 8
DNIMLDDP_00785 1.5e-141 M Glycosyltransferase like family 2
DNIMLDDP_00786 9.8e-133 2.7.8.12 GT2 M Glycosyltransferase like family 2
DNIMLDDP_00787 0.0 arbx M family 8
DNIMLDDP_00788 1.9e-223 secY2 U SecY translocase
DNIMLDDP_00789 1.4e-284 asp1 S Accessory Sec system protein Asp1
DNIMLDDP_00790 3.3e-305 asp2 3.4.11.5 S Accessory Sec system GspB-transporter
DNIMLDDP_00791 2.2e-16 asp3 S Accessory Sec secretory system ASP3
DNIMLDDP_00792 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DNIMLDDP_00794 2.5e-283 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
DNIMLDDP_00795 4.2e-261 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
DNIMLDDP_00796 7.8e-22 L Phage integrase, N-terminal SAM-like domain
DNIMLDDP_00797 1.3e-224 oxlT P Major Facilitator Superfamily
DNIMLDDP_00798 3e-159 spoU 2.1.1.185 J Methyltransferase
DNIMLDDP_00799 1.9e-90 ywlG S Belongs to the UPF0340 family
DNIMLDDP_00800 3.4e-65 rmaI K Transcriptional regulator
DNIMLDDP_00801 5.1e-152 EGP Major facilitator Superfamily
DNIMLDDP_00802 1.2e-56 EGP Major facilitator Superfamily
DNIMLDDP_00803 1.5e-107 yvyE 3.4.13.9 S YigZ family
DNIMLDDP_00804 1.1e-250 comFA L Helicase C-terminal domain protein
DNIMLDDP_00805 1.4e-93 comFC S Competence protein
DNIMLDDP_00806 4.5e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DNIMLDDP_00807 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DNIMLDDP_00808 1.7e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DNIMLDDP_00809 7.7e-31 KT PspC domain protein
DNIMLDDP_00810 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
DNIMLDDP_00811 1.7e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DNIMLDDP_00812 9.4e-155 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DNIMLDDP_00813 1.9e-181 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
DNIMLDDP_00814 2.8e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
DNIMLDDP_00815 4.6e-137 yrjD S LUD domain
DNIMLDDP_00816 3e-289 lutB C 4Fe-4S dicluster domain
DNIMLDDP_00817 7.8e-168 lutA C Cysteine-rich domain
DNIMLDDP_00818 1.7e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DNIMLDDP_00819 1.8e-204 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
DNIMLDDP_00820 6.5e-162 aatB ET PFAM extracellular solute-binding protein, family 3
DNIMLDDP_00821 2.1e-88 ykhA 3.1.2.20 I Thioesterase superfamily
DNIMLDDP_00822 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
DNIMLDDP_00823 5.5e-161 degV S EDD domain protein, DegV family
DNIMLDDP_00824 1.1e-89
DNIMLDDP_00825 3.1e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
DNIMLDDP_00826 1.2e-157 gspA M family 8
DNIMLDDP_00827 1.1e-153 S Alpha beta hydrolase
DNIMLDDP_00828 4.5e-94 K Acetyltransferase (GNAT) domain
DNIMLDDP_00829 2.2e-227 XK27_08635 S UPF0210 protein
DNIMLDDP_00830 1.2e-155 K LysR substrate binding domain protein
DNIMLDDP_00831 2.8e-79 C Flavodoxin
DNIMLDDP_00832 4.4e-76 yphH S Cupin domain
DNIMLDDP_00833 6.5e-73 yeaL S UPF0756 membrane protein
DNIMLDDP_00834 4.5e-242 EGP Major facilitator Superfamily
DNIMLDDP_00835 5.5e-74 copY K Copper transport repressor CopY TcrY
DNIMLDDP_00836 7.2e-245 yhdP S Transporter associated domain
DNIMLDDP_00837 0.0 ubiB S ABC1 family
DNIMLDDP_00838 1.1e-144 S DUF218 domain
DNIMLDDP_00839 5.4e-68 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DNIMLDDP_00840 1.6e-56 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNIMLDDP_00841 5.9e-55 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DNIMLDDP_00842 0.0 uvrA3 L excinuclease ABC, A subunit
DNIMLDDP_00843 4.3e-121 S SNARE associated Golgi protein
DNIMLDDP_00844 2.3e-229 N Uncharacterized conserved protein (DUF2075)
DNIMLDDP_00845 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DNIMLDDP_00846 3.4e-149 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
DNIMLDDP_00847 1e-270 ywfO S HD domain protein
DNIMLDDP_00848 2.1e-146 yxeH S hydrolase
DNIMLDDP_00849 9e-48
DNIMLDDP_00850 4.2e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DNIMLDDP_00851 3.5e-239 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DNIMLDDP_00852 6.9e-150 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
DNIMLDDP_00853 4.7e-127 znuB U ABC 3 transport family
DNIMLDDP_00854 3.2e-121 fhuC P ABC transporter
DNIMLDDP_00855 6.9e-167 znuA P Belongs to the bacterial solute-binding protein 9 family
DNIMLDDP_00856 3.1e-161 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DNIMLDDP_00857 6.8e-37 veg S Biofilm formation stimulator VEG
DNIMLDDP_00858 9.5e-161 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DNIMLDDP_00859 3.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DNIMLDDP_00860 3.5e-154 tatD L hydrolase, TatD family
DNIMLDDP_00861 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DNIMLDDP_00862 2e-160 yunF F Protein of unknown function DUF72
DNIMLDDP_00864 1.2e-129 cobB K SIR2 family
DNIMLDDP_00865 1.9e-175
DNIMLDDP_00866 6.3e-227 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
DNIMLDDP_00867 1e-165 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
DNIMLDDP_00868 7.7e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNIMLDDP_00869 4e-181 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
DNIMLDDP_00870 6.3e-81 ndk 2.7.4.6 F Belongs to the NDK family
DNIMLDDP_00871 0.0 helD 3.6.4.12 L DNA helicase
DNIMLDDP_00872 2.4e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
DNIMLDDP_00874 2.9e-232 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DNIMLDDP_00875 3e-13 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DNIMLDDP_00876 6.4e-263 yfnA E amino acid
DNIMLDDP_00877 2.4e-118 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DNIMLDDP_00878 8.9e-41 1.3.5.4 S FMN binding
DNIMLDDP_00879 1.3e-221 norA EGP Major facilitator Superfamily
DNIMLDDP_00880 5.8e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DNIMLDDP_00881 2.8e-154 metQ1 P Belongs to the nlpA lipoprotein family
DNIMLDDP_00882 4.7e-191 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DNIMLDDP_00883 3.1e-103 metI P ABC transporter permease
DNIMLDDP_00884 5.5e-214 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
DNIMLDDP_00885 1.9e-113 clcA P chloride
DNIMLDDP_00886 3.9e-46 clcA P chloride
DNIMLDDP_00887 8.8e-215 L transposase, IS605 OrfB family
DNIMLDDP_00888 1.9e-63 L PFAM transposase IS200-family protein
DNIMLDDP_00889 2e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
DNIMLDDP_00890 1.9e-102 proW P ABC transporter, permease protein
DNIMLDDP_00891 6.5e-142 proV E ABC transporter, ATP-binding protein
DNIMLDDP_00892 2.4e-108 proWZ P ABC transporter permease
DNIMLDDP_00893 6e-163 proX M ABC transporter, substrate-binding protein, QAT family
DNIMLDDP_00894 3.8e-73 K Transcriptional regulator
DNIMLDDP_00895 1.6e-50 1.6.5.2 GM NAD(P)H-binding
DNIMLDDP_00896 1.6e-35 1.6.5.2 GM NAD(P)H-binding
DNIMLDDP_00898 5.4e-220 5.4.2.7 G Metalloenzyme superfamily
DNIMLDDP_00899 0.0 cadA P P-type ATPase
DNIMLDDP_00900 6.9e-117 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
DNIMLDDP_00901 3.9e-125
DNIMLDDP_00902 3.7e-51 S Sugar efflux transporter for intercellular exchange
DNIMLDDP_00903 2.9e-246 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
DNIMLDDP_00905 0.0 L Helicase C-terminal domain protein
DNIMLDDP_00906 1.7e-71 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
DNIMLDDP_00907 7e-178 S Aldo keto reductase
DNIMLDDP_00909 8.5e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DNIMLDDP_00910 1.6e-25 psiE S Phosphate-starvation-inducible E
DNIMLDDP_00911 3.4e-97 ydeN S Serine hydrolase
DNIMLDDP_00913 3.8e-182 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DNIMLDDP_00914 8.3e-252 nhaC C Na H antiporter NhaC
DNIMLDDP_00915 4.5e-38 S Cytochrome b5-like Heme/Steroid binding domain
DNIMLDDP_00916 1.8e-113 ywnB S NAD(P)H-binding
DNIMLDDP_00917 3.2e-36
DNIMLDDP_00918 1.2e-129 IQ Dehydrogenase reductase
DNIMLDDP_00919 9.8e-239 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
DNIMLDDP_00920 5.6e-15 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DNIMLDDP_00921 1.9e-18 3.2.1.18 GH33 M Rib/alpha-like repeat
DNIMLDDP_00925 6.4e-198 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
DNIMLDDP_00926 1e-68 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
DNIMLDDP_00927 5.5e-45 yitW S Pfam:DUF59
DNIMLDDP_00928 1.6e-169 moaA 4.1.99.22 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DNIMLDDP_00929 1.9e-134 L Transposase
DNIMLDDP_00930 4.8e-65 L Transposase
DNIMLDDP_00931 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DNIMLDDP_00932 2.4e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DNIMLDDP_00933 3.9e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DNIMLDDP_00934 1.7e-106 pilD 3.4.23.43 NOU Type II secretory pathway prepilin signal peptidase PulO and related peptidases
DNIMLDDP_00935 2.3e-199 ykiI
DNIMLDDP_00936 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNIMLDDP_00937 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DNIMLDDP_00938 1e-110 K Bacterial regulatory proteins, tetR family
DNIMLDDP_00939 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DNIMLDDP_00940 4.4e-77 ctsR K Belongs to the CtsR family
DNIMLDDP_00941 2.1e-196 adhP 1.1.1.1 C alcohol dehydrogenase
DNIMLDDP_00942 1.8e-150 S Hydrolases of the alpha beta superfamily
DNIMLDDP_00943 2.1e-24
DNIMLDDP_00944 9.5e-59
DNIMLDDP_00945 1.3e-70
DNIMLDDP_00946 9.3e-32
DNIMLDDP_00947 8.3e-151 3.1.3.73 G Belongs to the phosphoglycerate mutase family
DNIMLDDP_00948 4.7e-123 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DNIMLDDP_00949 3.1e-101 fic D Fic/DOC family
DNIMLDDP_00950 2.8e-70
DNIMLDDP_00951 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
DNIMLDDP_00952 2.1e-88 L nuclease
DNIMLDDP_00953 0.0 sbcC L Putative exonuclease SbcCD, C subunit
DNIMLDDP_00954 2e-208 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
DNIMLDDP_00955 2e-143 ywqE 3.1.3.48 GM PHP domain protein
DNIMLDDP_00956 0.0 snf 2.7.11.1 KL domain protein
DNIMLDDP_00957 6.7e-07 D nuclear chromosome segregation
DNIMLDDP_00958 1e-37
DNIMLDDP_00959 5.7e-67 T Toxin-antitoxin system, toxin component, MazF family
DNIMLDDP_00960 7.7e-49 L Transposase
DNIMLDDP_00961 1.1e-58 L Transposase
DNIMLDDP_00962 3.1e-147 holA 2.7.7.7 L DNA polymerase III delta subunit
DNIMLDDP_00963 0.0 comEC S Competence protein ComEC
DNIMLDDP_00964 3.1e-89 comEB 3.5.4.12 F ComE operon protein 2
DNIMLDDP_00965 5.8e-80 comEA L Competence protein ComEA
DNIMLDDP_00966 4.3e-197 ylbL T Belongs to the peptidase S16 family
DNIMLDDP_00967 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DNIMLDDP_00968 1.6e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
DNIMLDDP_00969 3e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
DNIMLDDP_00970 2.7e-222 ftsW D Belongs to the SEDS family
DNIMLDDP_00971 0.0 typA T GTP-binding protein TypA
DNIMLDDP_00972 3.8e-134 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
DNIMLDDP_00973 3.7e-45 yktA S Belongs to the UPF0223 family
DNIMLDDP_00974 1.4e-275 lpdA 1.8.1.4 C Dehydrogenase
DNIMLDDP_00975 1.7e-222 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
DNIMLDDP_00976 2.4e-181 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
DNIMLDDP_00977 2.8e-207 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
DNIMLDDP_00978 1.4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DNIMLDDP_00979 4.8e-79
DNIMLDDP_00980 9.8e-32 ykzG S Belongs to the UPF0356 family
DNIMLDDP_00981 6.7e-181 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
DNIMLDDP_00982 5.2e-53 ywiB S Domain of unknown function (DUF1934)
DNIMLDDP_00983 8.7e-51 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
DNIMLDDP_00984 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DNIMLDDP_00985 2e-236 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DNIMLDDP_00986 4.6e-41 rpmE2 J Ribosomal protein L31
DNIMLDDP_00987 7.7e-236 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DNIMLDDP_00988 3.1e-164 S Alpha/beta hydrolase of unknown function (DUF915)
DNIMLDDP_00989 7.3e-116 srtA 3.4.22.70 M sortase family
DNIMLDDP_00990 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
DNIMLDDP_00991 4.2e-160 3.2.1.55 GH51 G Right handed beta helix region
DNIMLDDP_00992 9.8e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DNIMLDDP_00993 1.3e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
DNIMLDDP_00994 9.2e-121 pgm3 3.1.3.73 G Belongs to the phosphoglycerate mutase family
DNIMLDDP_00995 8e-87 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNIMLDDP_00996 2e-92 lemA S LemA family
DNIMLDDP_00997 2e-158 htpX O Belongs to the peptidase M48B family
DNIMLDDP_00998 1.9e-256 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DNIMLDDP_00999 3.6e-253 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
DNIMLDDP_01009 2e-92 2.3.1.128 K Acetyltransferase (GNAT) domain
DNIMLDDP_01010 6.9e-157 lmrB EGP Major facilitator Superfamily
DNIMLDDP_01011 3.1e-31 lmrB EGP Major facilitator Superfamily
DNIMLDDP_01012 6.5e-16 lmrB EGP Major facilitator Superfamily
DNIMLDDP_01013 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
DNIMLDDP_01014 7.6e-111 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DNIMLDDP_01015 2.4e-156 sufD O Uncharacterized protein family (UPF0051)
DNIMLDDP_01016 2e-42 lytE M LysM domain protein
DNIMLDDP_01017 0.0 oppD EP Psort location Cytoplasmic, score
DNIMLDDP_01018 2.6e-89 lytE M LysM domain protein
DNIMLDDP_01019 1.5e-146 xth 3.1.11.2 L exodeoxyribonuclease III
DNIMLDDP_01020 9.5e-236 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
DNIMLDDP_01021 1.2e-236 preA 1.3.1.1 C 4Fe-4S dicluster domain
DNIMLDDP_01022 1.3e-151 yeaE S Aldo keto
DNIMLDDP_01023 2e-76 hsp O Belongs to the small heat shock protein (HSP20) family
DNIMLDDP_01024 3.3e-283 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
DNIMLDDP_01025 2.9e-78 S Psort location Cytoplasmic, score
DNIMLDDP_01026 1.2e-83 S Short repeat of unknown function (DUF308)
DNIMLDDP_01027 1e-23
DNIMLDDP_01028 5.9e-100 V VanZ like family
DNIMLDDP_01029 7.7e-231 cycA E Amino acid permease
DNIMLDDP_01030 2.8e-84 perR P Belongs to the Fur family
DNIMLDDP_01031 7.9e-258 EGP Major facilitator Superfamily
DNIMLDDP_01032 7.9e-94 tag 3.2.2.20 L glycosylase
DNIMLDDP_01033 1.9e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DNIMLDDP_01034 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNIMLDDP_01035 4.9e-41
DNIMLDDP_01036 2.3e-301 ytgP S Polysaccharide biosynthesis protein
DNIMLDDP_01037 2.7e-152 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DNIMLDDP_01038 2.8e-276 pepV 3.5.1.18 E dipeptidase PepV
DNIMLDDP_01039 7.3e-86 uspA T Belongs to the universal stress protein A family
DNIMLDDP_01040 4.1e-176 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DNIMLDDP_01041 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
DNIMLDDP_01042 2.5e-112
DNIMLDDP_01043 3.3e-186 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
DNIMLDDP_01044 1.4e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DNIMLDDP_01045 1.8e-31
DNIMLDDP_01046 2.7e-109 S CAAX protease self-immunity
DNIMLDDP_01047 1.9e-43
DNIMLDDP_01049 1.7e-66
DNIMLDDP_01050 2.6e-55 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DNIMLDDP_01051 2.9e-90 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
DNIMLDDP_01052 6.9e-104 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
DNIMLDDP_01053 1.8e-221 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
DNIMLDDP_01054 5.4e-104 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
DNIMLDDP_01055 3.6e-213 folP 2.5.1.15 H dihydropteroate synthase
DNIMLDDP_01056 6.7e-43
DNIMLDDP_01057 4.8e-39
DNIMLDDP_01059 4.2e-167 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DNIMLDDP_01060 5.3e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
DNIMLDDP_01061 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
DNIMLDDP_01062 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
DNIMLDDP_01063 9.4e-38 yheA S Belongs to the UPF0342 family
DNIMLDDP_01064 1.8e-220 yhaO L Ser Thr phosphatase family protein
DNIMLDDP_01065 0.0 L AAA domain
DNIMLDDP_01066 1.2e-180 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNIMLDDP_01068 6.6e-35 S Transglycosylase associated protein
DNIMLDDP_01069 7e-226 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DNIMLDDP_01070 1.5e-126 3.1.3.73 G phosphoglycerate mutase
DNIMLDDP_01071 5.7e-115 dedA S SNARE associated Golgi protein
DNIMLDDP_01072 0.0 helD 3.6.4.12 L DNA helicase
DNIMLDDP_01073 1.2e-36 Q pyridine nucleotide-disulphide oxidoreductase
DNIMLDDP_01074 1.6e-157 EG EamA-like transporter family
DNIMLDDP_01075 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DNIMLDDP_01076 1.7e-176 coaA 2.7.1.33 F Pantothenic acid kinase
DNIMLDDP_01077 6.6e-218 S cog cog1373
DNIMLDDP_01079 3.6e-301 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
DNIMLDDP_01081 6.4e-88 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
DNIMLDDP_01082 4.1e-89 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
DNIMLDDP_01083 3e-156 rssA S Phospholipase, patatin family
DNIMLDDP_01084 9.4e-118 L Integrase
DNIMLDDP_01085 2.7e-152 EG EamA-like transporter family
DNIMLDDP_01086 9.6e-129 narI 1.7.5.1 C Nitrate reductase
DNIMLDDP_01087 8.7e-99 narJ C nitrate reductase molybdenum cofactor assembly chaperone
DNIMLDDP_01088 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
DNIMLDDP_01089 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DNIMLDDP_01090 1.8e-184 moeB 2.7.7.73, 2.7.7.80 H ThiF family
DNIMLDDP_01091 5.2e-84 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
DNIMLDDP_01092 8.2e-224 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
DNIMLDDP_01093 2e-75 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
DNIMLDDP_01094 1.2e-95 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
DNIMLDDP_01095 5.7e-43
DNIMLDDP_01096 5.1e-190 comP 2.7.13.3 F Sensor histidine kinase
DNIMLDDP_01097 2.5e-92 nreC K PFAM regulatory protein LuxR
DNIMLDDP_01098 1.4e-297 mco Q Multicopper oxidase
DNIMLDDP_01099 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DNIMLDDP_01100 7.7e-63 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
DNIMLDDP_01101 1.1e-09 tesE Q hydratase
DNIMLDDP_01102 2.7e-114 tesE Q hydratase
DNIMLDDP_01103 1.6e-171 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DNIMLDDP_01105 5e-28 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DNIMLDDP_01107 7.7e-84 ybgJ 3.5.1.54 E Allophanate hydrolase subunit 1
DNIMLDDP_01108 3.1e-107 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
DNIMLDDP_01109 3.8e-38 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
DNIMLDDP_01110 7.8e-207 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
DNIMLDDP_01111 7.6e-103 ycsF S LamB/YcsF family
DNIMLDDP_01112 2.4e-178 ycsG P Natural resistance-associated macrophage protein
DNIMLDDP_01113 7.5e-57 ltrA S Bacterial low temperature requirement A protein (LtrA)
DNIMLDDP_01114 3.4e-43 ltrA S Bacterial low temperature requirement A protein (LtrA)
DNIMLDDP_01115 1.6e-79 uspA T universal stress protein
DNIMLDDP_01116 1.4e-78 K AsnC family
DNIMLDDP_01117 1.6e-228 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
DNIMLDDP_01118 3e-97 dedA 3.1.3.1 S SNARE associated Golgi protein
DNIMLDDP_01119 7.7e-180 galR K Transcriptional regulator
DNIMLDDP_01120 1.5e-277 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
DNIMLDDP_01121 1.1e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DNIMLDDP_01122 2.1e-177 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
DNIMLDDP_01123 1.9e-144 ptp3 3.1.3.48 T Tyrosine phosphatase family
DNIMLDDP_01124 5.3e-92 yxkA S Phosphatidylethanolamine-binding protein
DNIMLDDP_01125 9.1e-36
DNIMLDDP_01126 2e-52
DNIMLDDP_01127 1.1e-201
DNIMLDDP_01128 1.1e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DNIMLDDP_01129 2.9e-134 pnuC H nicotinamide mononucleotide transporter
DNIMLDDP_01130 3.9e-156 ytbE 1.1.1.346 S Aldo keto reductase
DNIMLDDP_01131 7e-124 K response regulator
DNIMLDDP_01132 2.8e-182 T PhoQ Sensor
DNIMLDDP_01133 7.1e-133 macB2 V ABC transporter, ATP-binding protein
DNIMLDDP_01134 0.0 ysaB V FtsX-like permease family
DNIMLDDP_01135 7.2e-155 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
DNIMLDDP_01136 4.8e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
DNIMLDDP_01137 6.2e-10 K helix_turn_helix, mercury resistance
DNIMLDDP_01138 7.1e-286 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNIMLDDP_01139 4.9e-194 EGP Major facilitator Superfamily
DNIMLDDP_01140 3.9e-87 ymdB S Macro domain protein
DNIMLDDP_01141 3e-99 K Helix-turn-helix XRE-family like proteins
DNIMLDDP_01142 0.0 pepO 3.4.24.71 O Peptidase family M13
DNIMLDDP_01143 1.9e-46
DNIMLDDP_01144 2.1e-230 S Putative metallopeptidase domain
DNIMLDDP_01145 4.4e-203 3.1.3.1 S associated with various cellular activities
DNIMLDDP_01146 5.2e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
DNIMLDDP_01147 5.9e-64 yeaO S Protein of unknown function, DUF488
DNIMLDDP_01149 1.5e-118 yrkL S Flavodoxin-like fold
DNIMLDDP_01150 1.5e-52
DNIMLDDP_01151 5.3e-16 S Domain of unknown function (DUF4767)
DNIMLDDP_01152 4.2e-29 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DNIMLDDP_01153 9.1e-49
DNIMLDDP_01154 8.9e-206 nrnB S DHHA1 domain
DNIMLDDP_01155 6.2e-227 S Uncharacterized protein conserved in bacteria (DUF2325)
DNIMLDDP_01156 1.2e-247 brnQ U Component of the transport system for branched-chain amino acids
DNIMLDDP_01157 1.1e-104 NU mannosyl-glycoprotein
DNIMLDDP_01158 5e-142 S Putative ABC-transporter type IV
DNIMLDDP_01159 7.1e-273 S ABC transporter, ATP-binding protein
DNIMLDDP_01160 6.4e-08 S HTH domain
DNIMLDDP_01161 2.4e-34 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
DNIMLDDP_01162 4.3e-181 arsB 1.20.4.1 P Sodium Bile acid symporter family
DNIMLDDP_01163 8.2e-72 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DNIMLDDP_01164 6.1e-55 cadX K Bacterial regulatory protein, arsR family
DNIMLDDP_01165 6.2e-95 cadD P Cadmium resistance transporter
DNIMLDDP_01166 1.1e-13 K Transcriptional
DNIMLDDP_01167 4.5e-51 L Integrase
DNIMLDDP_01168 1e-28 WQ51_00220 K Helix-turn-helix domain
DNIMLDDP_01169 6e-98 S Protein of unknown function (DUF3278)
DNIMLDDP_01170 1.7e-73 M PFAM NLP P60 protein
DNIMLDDP_01171 4.1e-181 ABC-SBP S ABC transporter
DNIMLDDP_01172 1.1e-153 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
DNIMLDDP_01173 4.8e-137 XK27_08845 S ABC transporter, ATP-binding protein
DNIMLDDP_01174 7.4e-95 P Cadmium resistance transporter
DNIMLDDP_01175 9.9e-55 K Transcriptional regulator, ArsR family
DNIMLDDP_01176 4.3e-234 mepA V MATE efflux family protein
DNIMLDDP_01177 1.5e-55 trxA O Belongs to the thioredoxin family
DNIMLDDP_01178 7.3e-130 terC P membrane
DNIMLDDP_01179 1.8e-167 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DNIMLDDP_01180 2.8e-168 corA P CorA-like Mg2+ transporter protein
DNIMLDDP_01181 4.3e-280 pipD E Dipeptidase
DNIMLDDP_01182 1.4e-240 pbuX F xanthine permease
DNIMLDDP_01183 2.7e-250 nhaC C Na H antiporter NhaC
DNIMLDDP_01184 2.5e-184 S C4-dicarboxylate anaerobic carrier
DNIMLDDP_01185 6.7e-67 S C4-dicarboxylate anaerobic carrier
DNIMLDDP_01186 1.3e-70 IQ Enoyl-(Acyl carrier protein) reductase
DNIMLDDP_01187 2.8e-20 K Bacterial transcriptional regulator
DNIMLDDP_01189 8e-125 pgm3 3.1.3.73 G phosphoglycerate mutase family
DNIMLDDP_01190 1.2e-39
DNIMLDDP_01191 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DNIMLDDP_01192 8.4e-207 gldA 1.1.1.6 C dehydrogenase
DNIMLDDP_01193 5e-273 pipD E Dipeptidase
DNIMLDDP_01194 3.6e-199 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
DNIMLDDP_01196 1.2e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DNIMLDDP_01197 7.5e-58
DNIMLDDP_01198 3.1e-178 prmA J Ribosomal protein L11 methyltransferase
DNIMLDDP_01199 6.7e-128 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
DNIMLDDP_01200 9.4e-50
DNIMLDDP_01201 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DNIMLDDP_01202 1.9e-77 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DNIMLDDP_01203 1.2e-165 yniA G Phosphotransferase enzyme family
DNIMLDDP_01204 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
DNIMLDDP_01205 3.8e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNIMLDDP_01206 1.1e-262 glnPH2 P ABC transporter permease
DNIMLDDP_01207 1.2e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
DNIMLDDP_01208 3.8e-70 yqeY S YqeY-like protein
DNIMLDDP_01209 7.5e-130 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DNIMLDDP_01210 7.6e-217 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DNIMLDDP_01211 4.9e-137 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DNIMLDDP_01212 6.2e-140 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
DNIMLDDP_01213 2.3e-184 mtnE 2.6.1.83 E Aminotransferase
DNIMLDDP_01214 4.3e-183 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNIMLDDP_01215 0.0 uup S ABC transporter, ATP-binding protein
DNIMLDDP_01216 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DNIMLDDP_01217 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DNIMLDDP_01218 5.5e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DNIMLDDP_01219 7.6e-80 S Aminoacyl-tRNA editing domain
DNIMLDDP_01220 7.6e-302 ybeC E amino acid
DNIMLDDP_01221 0.0 ydaO E amino acid
DNIMLDDP_01222 2.7e-39
DNIMLDDP_01223 3e-165 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNIMLDDP_01224 6e-195 aadAT EK Aminotransferase, class I
DNIMLDDP_01225 3.4e-151 ansA 3.5.1.1 EJ L-asparaginase, type I
DNIMLDDP_01226 1.8e-77 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
DNIMLDDP_01227 6e-93 cca 2.7.7.19, 2.7.7.72 J Aminoglycoside-2''-adenylyltransferase
DNIMLDDP_01228 9.4e-71 pre D plasmid recombination enzyme
DNIMLDDP_01229 9.2e-40 S Plasmid replication protein
DNIMLDDP_01230 7.1e-25 K Helix-turn-helix domain
DNIMLDDP_01231 1e-33 S Phage derived protein Gp49-like (DUF891)
DNIMLDDP_01232 1e-60 L Resolvase, N terminal domain
DNIMLDDP_01236 1.4e-140 D CobQ CobB MinD ParA nucleotide binding domain protein
DNIMLDDP_01237 2.3e-28
DNIMLDDP_01239 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
DNIMLDDP_01240 8.7e-34 copZ C Heavy-metal-associated domain
DNIMLDDP_01241 5.7e-92 dps P Belongs to the Dps family
DNIMLDDP_01242 6.8e-113 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
DNIMLDDP_01243 1.7e-16 ung2 3.2.2.27 L Uracil-DNA glycosylase
DNIMLDDP_01244 1.5e-82 ung2 3.2.2.27 L Uracil-DNA glycosylase
DNIMLDDP_01245 1.8e-61 5.1.1.13 M Asp/Glu/Hydantoin racemase
DNIMLDDP_01246 7.5e-22 5.1.1.13 M Asp/Glu/Hydantoin racemase
DNIMLDDP_01247 5.4e-148 L Recombinase
DNIMLDDP_01248 2.4e-110 L Recombinase zinc beta ribbon domain
DNIMLDDP_01249 1.3e-68 L Recombinase zinc beta ribbon domain
DNIMLDDP_01250 8.2e-19
DNIMLDDP_01251 5.4e-55 S Bacteriophage holin family
DNIMLDDP_01252 6.5e-55 S Phage head-tail joining protein
DNIMLDDP_01253 4.6e-39 S Phage gp6-like head-tail connector protein
DNIMLDDP_01254 8.8e-172 S Phage capsid family
DNIMLDDP_01255 1.2e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DNIMLDDP_01256 1.1e-127 3.6.1.13, 3.6.1.55 F NUDIX domain
DNIMLDDP_01257 1e-257 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DNIMLDDP_01258 1.2e-102 pncA Q Isochorismatase family
DNIMLDDP_01259 1.3e-10 glsA 3.5.1.2 E Belongs to the glutaminase family
DNIMLDDP_01260 4.8e-57 ytzB S Small secreted protein
DNIMLDDP_01261 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
DNIMLDDP_01262 2.9e-119 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DNIMLDDP_01263 4.9e-251 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
DNIMLDDP_01264 1.9e-119 ybhL S Belongs to the BI1 family
DNIMLDDP_01265 9.2e-116 yoaK S Protein of unknown function (DUF1275)
DNIMLDDP_01266 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DNIMLDDP_01267 4.1e-158 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
DNIMLDDP_01268 1.7e-97 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DNIMLDDP_01269 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DNIMLDDP_01270 1e-222 dnaB L replication initiation and membrane attachment
DNIMLDDP_01271 4.3e-172 dnaI L Primosomal protein DnaI
DNIMLDDP_01272 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DNIMLDDP_01273 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
DNIMLDDP_01274 3.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DNIMLDDP_01275 8e-85 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DNIMLDDP_01276 4.8e-93 K Acetyltransferase (GNAT) family
DNIMLDDP_01277 8.5e-12
DNIMLDDP_01278 4.9e-64 yhjX P Major Facilitator Superfamily
DNIMLDDP_01279 9.3e-119 ybhL S Belongs to the BI1 family
DNIMLDDP_01280 2.1e-79 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
DNIMLDDP_01281 5.7e-194 S Protein of unknown function (DUF3114)
DNIMLDDP_01282 1e-295 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
DNIMLDDP_01283 1.5e-164 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DNIMLDDP_01284 1.1e-104 yvdD 3.2.2.10 S Belongs to the LOG family
DNIMLDDP_01285 9.1e-62 S Domain of unknown function (DUF4828)
DNIMLDDP_01286 5.9e-191 mocA S Oxidoreductase
DNIMLDDP_01287 2.5e-231 yfmL L DEAD DEAH box helicase
DNIMLDDP_01289 9e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DNIMLDDP_01290 3.8e-33
DNIMLDDP_01291 7.5e-16
DNIMLDDP_01292 1.3e-67 gtcA S Teichoic acid glycosylation protein
DNIMLDDP_01293 1.4e-78 fld C Flavodoxin
DNIMLDDP_01294 6.5e-167 map 3.4.11.18 E Methionine Aminopeptidase
DNIMLDDP_01295 4.3e-89
DNIMLDDP_01296 1.8e-60 K Transcriptional regulator, HxlR family
DNIMLDDP_01297 3.4e-167 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DNIMLDDP_01298 9e-140 epsB M biosynthesis protein
DNIMLDDP_01299 1.9e-117 ywqD 2.7.10.1 D Capsular exopolysaccharide family
DNIMLDDP_01300 1e-103 rfbP M Bacterial sugar transferase
DNIMLDDP_01301 7.2e-88 M family 8
DNIMLDDP_01302 5.9e-69 rfbF GT2 S Glycosyl transferase family 2
DNIMLDDP_01303 2.7e-48 GT2 S Glycosyltransferase, group 2 family protein
DNIMLDDP_01304 2.5e-28 M Glycosyl transferases group 1
DNIMLDDP_01305 8.1e-20
DNIMLDDP_01306 2.4e-85 M Glycosyl transferase, family 2
DNIMLDDP_01307 1.5e-102 S Membrane protein involved in the export of O-antigen and teichoic acid
DNIMLDDP_01308 6.4e-162 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DNIMLDDP_01309 4.2e-109 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
DNIMLDDP_01310 2.6e-97 2.3.1.128 K acetyltransferase
DNIMLDDP_01311 2.4e-192
DNIMLDDP_01313 3.4e-35 L Transposase
DNIMLDDP_01314 8.6e-120 L Transposase
DNIMLDDP_01315 8.1e-131 K Transcriptional regulatory protein, C-terminal domain protein
DNIMLDDP_01316 5.6e-158 pstS P Phosphate
DNIMLDDP_01317 9.5e-153 pstC P probably responsible for the translocation of the substrate across the membrane
DNIMLDDP_01318 5.9e-155 pstA P Phosphate transport system permease protein PstA
DNIMLDDP_01319 3.1e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DNIMLDDP_01320 1.9e-124 phoU P Plays a role in the regulation of phosphate uptake
DNIMLDDP_01321 2.1e-141
DNIMLDDP_01323 2.5e-242 ydaM M Glycosyl transferase
DNIMLDDP_01324 3.2e-222 G Glycosyl hydrolases family 8
DNIMLDDP_01325 2.3e-139 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
DNIMLDDP_01326 8.9e-253 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DNIMLDDP_01327 4.7e-213 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DNIMLDDP_01328 4.3e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DNIMLDDP_01329 8.1e-101 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DNIMLDDP_01330 5.8e-172 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
DNIMLDDP_01331 3.4e-187 thrC 4.2.3.1 E Threonine synthase
DNIMLDDP_01332 2.7e-24 K helix_turn_helix, arabinose operon control protein
DNIMLDDP_01333 4.5e-129 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
DNIMLDDP_01334 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
DNIMLDDP_01335 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
DNIMLDDP_01336 6.6e-174 K AI-2E family transporter
DNIMLDDP_01337 1e-209 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DNIMLDDP_01338 4.2e-181 ccpA K catabolite control protein A
DNIMLDDP_01339 1.8e-132
DNIMLDDP_01340 5.9e-132 yebC K Transcriptional regulatory protein
DNIMLDDP_01341 4.9e-179 comGA NU Type II IV secretion system protein
DNIMLDDP_01342 5.1e-182 comGB NU type II secretion system
DNIMLDDP_01343 7.1e-47 comGC U competence protein ComGC
DNIMLDDP_01344 3.4e-79 NU general secretion pathway protein
DNIMLDDP_01345 3.2e-41
DNIMLDDP_01346 1.2e-68
DNIMLDDP_01348 2.1e-143 ytxK 2.1.1.72 L N-6 DNA Methylase
DNIMLDDP_01349 1.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DNIMLDDP_01350 1.6e-111 S Calcineurin-like phosphoesterase
DNIMLDDP_01351 6.6e-93 yutD S Protein of unknown function (DUF1027)
DNIMLDDP_01352 9.4e-133 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
DNIMLDDP_01353 3.3e-102 S Protein of unknown function (DUF1461)
DNIMLDDP_01354 4.7e-109 dedA S SNARE-like domain protein
DNIMLDDP_01355 1.1e-95 K Acetyltransferase (GNAT) domain
DNIMLDDP_01356 5e-295 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
DNIMLDDP_01357 3.1e-232 gntT EG Gluconate
DNIMLDDP_01358 4.9e-182 K Transcriptional regulator, LacI family
DNIMLDDP_01359 4.1e-289 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
DNIMLDDP_01360 1.1e-92
DNIMLDDP_01361 3.6e-25
DNIMLDDP_01362 1.8e-60 asp S Asp23 family, cell envelope-related function
DNIMLDDP_01363 1.2e-85 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
DNIMLDDP_01365 3e-48
DNIMLDDP_01366 2.7e-67 yqkB S Belongs to the HesB IscA family
DNIMLDDP_01367 3.9e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
DNIMLDDP_01368 8.1e-79 F NUDIX domain
DNIMLDDP_01369 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DNIMLDDP_01370 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DNIMLDDP_01371 1.2e-104 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DNIMLDDP_01372 1.4e-164 lacX 5.1.3.3 G Aldose 1-epimerase
DNIMLDDP_01373 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DNIMLDDP_01374 2.7e-160 dprA LU DNA protecting protein DprA
DNIMLDDP_01375 7.9e-140 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DNIMLDDP_01376 3.5e-160 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DNIMLDDP_01377 4.4e-35 yozE S Belongs to the UPF0346 family
DNIMLDDP_01378 1.5e-106 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
DNIMLDDP_01379 2.8e-168 ypmR E lipolytic protein G-D-S-L family
DNIMLDDP_01380 6.4e-151 DegV S EDD domain protein, DegV family
DNIMLDDP_01381 1.9e-110 hlyIII S protein, hemolysin III
DNIMLDDP_01382 9.6e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DNIMLDDP_01383 7.2e-191 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DNIMLDDP_01384 0.0 yfmR S ABC transporter, ATP-binding protein
DNIMLDDP_01385 8.2e-224 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
DNIMLDDP_01386 1.4e-234 S Tetratricopeptide repeat protein
DNIMLDDP_01387 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DNIMLDDP_01388 1.2e-249 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
DNIMLDDP_01389 1.5e-204 rpsA 1.17.7.4 J Ribosomal protein S1
DNIMLDDP_01390 7.6e-118 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
DNIMLDDP_01391 9.7e-25 M Lysin motif
DNIMLDDP_01392 8.4e-268 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
DNIMLDDP_01393 7.5e-194 ypbB 5.1.3.1 S Helix-turn-helix domain
DNIMLDDP_01394 5.5e-101 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DNIMLDDP_01395 5.9e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DNIMLDDP_01396 2.9e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DNIMLDDP_01397 9.3e-136 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DNIMLDDP_01398 2.8e-63 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DNIMLDDP_01399 2.9e-162 xerD D recombinase XerD
DNIMLDDP_01400 9.3e-169 cvfB S S1 domain
DNIMLDDP_01401 1.4e-270 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
DNIMLDDP_01402 0.0 dnaE 2.7.7.7 L DNA polymerase
DNIMLDDP_01403 2e-29 S Protein of unknown function (DUF2929)
DNIMLDDP_01404 1.1e-236 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
DNIMLDDP_01405 6.5e-156 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DNIMLDDP_01406 6.2e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
DNIMLDDP_01407 2.4e-220 patA 2.6.1.1 E Aminotransferase
DNIMLDDP_01408 7.7e-208 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DNIMLDDP_01409 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DNIMLDDP_01410 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
DNIMLDDP_01411 2e-180 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
DNIMLDDP_01412 5.8e-146 recO L Involved in DNA repair and RecF pathway recombination
DNIMLDDP_01413 1.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DNIMLDDP_01414 4.7e-59 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
DNIMLDDP_01415 3.3e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DNIMLDDP_01416 7.9e-180 phoH T phosphate starvation-inducible protein PhoH
DNIMLDDP_01417 5.4e-170 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
DNIMLDDP_01418 3.8e-83 bioY S BioY family
DNIMLDDP_01419 7.8e-263 argH 4.3.2.1 E argininosuccinate lyase
DNIMLDDP_01420 1.7e-237 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
DNIMLDDP_01421 1.4e-186 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
DNIMLDDP_01427 9e-113 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
DNIMLDDP_01428 3.3e-275 lysP E amino acid
DNIMLDDP_01429 4.7e-08 2.3.1.128 J Acetyltransferase (GNAT) domain
DNIMLDDP_01430 1.5e-118 lssY 3.6.1.27 I phosphatase
DNIMLDDP_01431 1e-81 S Threonine/Serine exporter, ThrE
DNIMLDDP_01432 4.4e-127 thrE S Putative threonine/serine exporter
DNIMLDDP_01433 1e-30 cspC K Cold shock protein
DNIMLDDP_01434 1.6e-123 sirR K iron dependent repressor
DNIMLDDP_01435 5.5e-164 czcD P cation diffusion facilitator family transporter
DNIMLDDP_01436 7.2e-116 S membrane
DNIMLDDP_01437 4.2e-108 S VIT family
DNIMLDDP_01438 5.5e-83 usp1 T Belongs to the universal stress protein A family
DNIMLDDP_01439 4.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNIMLDDP_01440 3.3e-152 glnH ET ABC transporter
DNIMLDDP_01441 2.4e-110 gluC P ABC transporter permease
DNIMLDDP_01442 3.6e-109 glnP P ABC transporter permease
DNIMLDDP_01443 1.8e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
DNIMLDDP_01444 1.5e-36 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNIMLDDP_01445 3.1e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNIMLDDP_01446 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DNIMLDDP_01447 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DNIMLDDP_01448 6.2e-196 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
DNIMLDDP_01449 8e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DNIMLDDP_01450 4.6e-296 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
DNIMLDDP_01451 2.4e-242 purD 6.3.4.13 F Belongs to the GARS family
DNIMLDDP_01452 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DNIMLDDP_01453 1e-166
DNIMLDDP_01454 5.4e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DNIMLDDP_01455 8e-182 iunH2 3.2.2.1 F nucleoside hydrolase
DNIMLDDP_01456 9.8e-183 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
DNIMLDDP_01457 1.3e-34 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DNIMLDDP_01458 7e-46 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DNIMLDDP_01459 6.8e-36 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DNIMLDDP_01460 1.3e-114 gph 3.1.3.18 S HAD hydrolase, family IA, variant
DNIMLDDP_01461 2.2e-177 yagE E amino acid
DNIMLDDP_01462 4.6e-52 yagE E amino acid
DNIMLDDP_01463 3.4e-85 dps P Belongs to the Dps family
DNIMLDDP_01464 0.0 pacL 3.6.3.8 P P-type ATPase
DNIMLDDP_01465 5.6e-177 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
DNIMLDDP_01466 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
DNIMLDDP_01471 2.2e-129 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
DNIMLDDP_01472 2e-135 accA 2.1.3.15, 6.4.1.2 I alpha subunit
DNIMLDDP_01473 2.5e-142 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
DNIMLDDP_01474 4.8e-257 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
DNIMLDDP_01475 8.6e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
DNIMLDDP_01476 5.8e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
DNIMLDDP_01477 2.5e-220 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
DNIMLDDP_01478 4.5e-124 IQ reductase
DNIMLDDP_01479 2.9e-152 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
DNIMLDDP_01480 1.4e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DNIMLDDP_01481 6e-169 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DNIMLDDP_01482 1.2e-76 marR K Transcriptional regulator, MarR family
DNIMLDDP_01483 1.1e-69 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
DNIMLDDP_01485 4.7e-199 xerS L Belongs to the 'phage' integrase family
DNIMLDDP_01486 2.5e-104 L Helix-turn-helix domain
DNIMLDDP_01487 9.8e-172
DNIMLDDP_01488 5.6e-74
DNIMLDDP_01489 1.3e-137 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
DNIMLDDP_01490 7.1e-147 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
DNIMLDDP_01491 3.6e-117 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
DNIMLDDP_01492 5.7e-228 clcA_2 P Chloride transporter, ClC family
DNIMLDDP_01493 4.4e-129 L PFAM transposase IS116 IS110 IS902
DNIMLDDP_01494 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
DNIMLDDP_01495 9.3e-110 lssY 3.6.1.27 I Acid phosphatase homologues
DNIMLDDP_01496 5.9e-160 L Transposase IS66 family
DNIMLDDP_01497 2.3e-41 XK27_01125 L PFAM IS66 Orf2 family protein
DNIMLDDP_01498 9.4e-193 L Transposase IS66 family
DNIMLDDP_01499 3.4e-53 XK27_01125 L PFAM IS66 Orf2 family protein
DNIMLDDP_01501 2.8e-86 tra L Transposase and inactivated derivatives, IS30 family
DNIMLDDP_01502 2.3e-82 M transferase activity, transferring glycosyl groups
DNIMLDDP_01503 3e-38 M transferase activity, transferring glycosyl groups
DNIMLDDP_01504 3.8e-18 nss M transferase activity, transferring glycosyl groups
DNIMLDDP_01505 1.5e-45 nss M transferase activity, transferring glycosyl groups
DNIMLDDP_01506 4.2e-76 arbx M family 8
DNIMLDDP_01507 3.2e-52 M Glycosyltransferase like family 2
DNIMLDDP_01508 6.2e-48 M Glycosyltransferase like family 2
DNIMLDDP_01509 3.6e-12 M Glycosyltransferase like family 2
DNIMLDDP_01510 4.9e-46 M family 8
DNIMLDDP_01511 0.0 M NlpC/P60 family
DNIMLDDP_01512 6.9e-308 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DNIMLDDP_01513 2.4e-225 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DNIMLDDP_01514 4.3e-163 yueF S AI-2E family transporter
DNIMLDDP_01515 0.0 csd1 3.5.1.28 G domain, Protein
DNIMLDDP_01516 2e-157 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
DNIMLDDP_01517 1e-116 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
DNIMLDDP_01518 4.5e-20 S Psort location Cytoplasmic, score 8.87
DNIMLDDP_01520 2e-61 soj D AAA domain
DNIMLDDP_01521 5.3e-10
DNIMLDDP_01523 0.0 LV site-specific DNA-methyltransferase (adenine-specific) activity
DNIMLDDP_01525 5.7e-90 L Integrase
DNIMLDDP_01526 8.1e-79 L An automated process has identified a potential problem with this gene model
DNIMLDDP_01529 1.8e-284 S Protein of unknown function DUF262
DNIMLDDP_01530 0.0 L Type III restriction enzyme, res subunit
DNIMLDDP_01531 7.6e-104 L Type III restriction enzyme, res subunit
DNIMLDDP_01532 6.5e-24 2.1.1.72, 3.1.21.4 L Eco57I restriction-modification methylase
DNIMLDDP_01533 7.7e-72 2.1.1.72, 3.1.21.4 L restriction endonuclease
DNIMLDDP_01534 7e-77 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
DNIMLDDP_01536 2.7e-255 G PTS system Galactitol-specific IIC component
DNIMLDDP_01537 9.3e-108 1.6.5.5 C Zinc-binding dehydrogenase
DNIMLDDP_01538 1.5e-49 1.6.5.5 C Zinc-binding dehydrogenase
DNIMLDDP_01539 8.5e-159
DNIMLDDP_01540 1e-72 K Transcriptional regulator
DNIMLDDP_01541 1e-171 D Alpha beta
DNIMLDDP_01542 1.1e-51 ypaA S Protein of unknown function (DUF1304)
DNIMLDDP_01543 0.0 yjcE P Sodium proton antiporter
DNIMLDDP_01544 1.6e-52 yvlA
DNIMLDDP_01545 6.6e-111 P Cobalt transport protein
DNIMLDDP_01546 4.9e-249 cbiO1 S ABC transporter, ATP-binding protein
DNIMLDDP_01547 1.3e-96 S ABC-type cobalt transport system, permease component
DNIMLDDP_01548 1.7e-176 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DNIMLDDP_01549 5.9e-201 XK27_09615 S reductase
DNIMLDDP_01550 2.1e-100 nqr 1.5.1.36 S reductase
DNIMLDDP_01552 5.9e-266 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DNIMLDDP_01553 1.1e-173 K Transcriptional regulator, LacI family
DNIMLDDP_01554 6.1e-260 G Major Facilitator
DNIMLDDP_01555 4.8e-207 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
DNIMLDDP_01556 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
DNIMLDDP_01557 8.3e-265 G Major Facilitator
DNIMLDDP_01558 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
DNIMLDDP_01559 1.1e-271 M protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes
DNIMLDDP_01560 1.4e-270 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
DNIMLDDP_01561 1.5e-267 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
DNIMLDDP_01562 8.3e-72
DNIMLDDP_01563 3.4e-74 K Transcriptional regulator, TetR family
DNIMLDDP_01564 2.1e-12 K Transcriptional regulator, TetR family
DNIMLDDP_01565 1.1e-13 steT_1 E amino acid
DNIMLDDP_01567 1.4e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DNIMLDDP_01568 6.9e-83
DNIMLDDP_01569 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DNIMLDDP_01570 9.9e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DNIMLDDP_01571 1.7e-262 nox C NADH oxidase
DNIMLDDP_01572 3e-87 hmpT S ECF-type riboflavin transporter, S component
DNIMLDDP_01573 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
DNIMLDDP_01574 1.7e-167 yvgN C Aldo keto reductase
DNIMLDDP_01575 6.6e-136 puuD S peptidase C26
DNIMLDDP_01576 4.7e-257 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
DNIMLDDP_01577 1.4e-215 yfeO P Voltage gated chloride channel
DNIMLDDP_01578 3.1e-226 sptS 2.7.13.3 T Histidine kinase
DNIMLDDP_01579 2.1e-117 K response regulator
DNIMLDDP_01580 3.7e-87 2.7.6.5 T Region found in RelA / SpoT proteins
DNIMLDDP_01581 1e-71
DNIMLDDP_01582 5.4e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
DNIMLDDP_01583 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
DNIMLDDP_01584 1.1e-256 malT G Major Facilitator
DNIMLDDP_01585 5.7e-214 phbA 2.3.1.9 I Belongs to the thiolase family
DNIMLDDP_01586 4.3e-172 malR K Transcriptional regulator, LacI family
DNIMLDDP_01587 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
DNIMLDDP_01588 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
DNIMLDDP_01589 7.2e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DNIMLDDP_01590 2e-103 wecD3 K PFAM GCN5-related N-acetyltransferase
DNIMLDDP_01592 0.0 clpL O associated with various cellular activities
DNIMLDDP_01593 7.8e-32
DNIMLDDP_01594 1.2e-214 patA 2.6.1.1 E Aminotransferase
DNIMLDDP_01595 3.2e-173 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DNIMLDDP_01596 5e-75 osmC O OsmC-like protein
DNIMLDDP_01597 9e-39
DNIMLDDP_01599 1.9e-107 K Cro/C1-type HTH DNA-binding domain
DNIMLDDP_01600 1.7e-13 L Transposase and inactivated derivatives
DNIMLDDP_01601 5.4e-158 L HTH-like domain
DNIMLDDP_01602 7.4e-169 bcrA V ABC transporter
DNIMLDDP_01603 9.8e-127 S ABC-2 family transporter protein
DNIMLDDP_01604 1.8e-110 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
DNIMLDDP_01605 1.2e-95 L Integrase
DNIMLDDP_01606 2e-53 S Phage derived protein Gp49-like (DUF891)
DNIMLDDP_01607 9.1e-38 K Helix-turn-helix domain
DNIMLDDP_01609 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DNIMLDDP_01611 4e-164 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
DNIMLDDP_01612 1.9e-122 S Domain of unknown function (DUF4811)
DNIMLDDP_01613 2.1e-269 lmrB EGP Major facilitator Superfamily
DNIMLDDP_01614 3.1e-72 merR K MerR HTH family regulatory protein
DNIMLDDP_01615 2.9e-57
DNIMLDDP_01616 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DNIMLDDP_01617 1.6e-183 S CAAX protease self-immunity
DNIMLDDP_01618 5.7e-231 EGP Sugar (and other) transporter
DNIMLDDP_01619 1.8e-254 yfnA E Amino Acid
DNIMLDDP_01620 6.9e-74 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
DNIMLDDP_01621 1.5e-98 gmk2 2.7.4.8 F Guanylate kinase
DNIMLDDP_01622 2.1e-81 zur P Belongs to the Fur family
DNIMLDDP_01623 4e-17 3.2.1.14 GH18
DNIMLDDP_01624 2.7e-149
DNIMLDDP_01625 3.4e-39 pspC KT positive regulation of macromolecule biosynthetic process
DNIMLDDP_01626 1.6e-94 K Transcriptional regulator (TetR family)
DNIMLDDP_01627 3.5e-233 V domain protein
DNIMLDDP_01628 3.6e-260 S Putative peptidoglycan binding domain
DNIMLDDP_01629 3.9e-108 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
DNIMLDDP_01630 1.6e-67
DNIMLDDP_01631 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
DNIMLDDP_01632 2.6e-214 yttB EGP Major facilitator Superfamily
DNIMLDDP_01633 8.2e-103
DNIMLDDP_01634 3.9e-24
DNIMLDDP_01635 1.8e-173 scrR K Transcriptional regulator, LacI family
DNIMLDDP_01636 3.7e-205 amtB P ammonium transporter
DNIMLDDP_01637 2e-247 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
DNIMLDDP_01638 8.6e-84 yvbK 3.1.3.25 K GNAT family
DNIMLDDP_01639 9.6e-92
DNIMLDDP_01640 4.1e-121 pnb C nitroreductase
DNIMLDDP_01641 3.1e-75 ogt 2.1.1.63 L Methyltransferase
DNIMLDDP_01642 1.6e-155 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
DNIMLDDP_01643 1.3e-65 S Protein of unknown function (DUF3021)
DNIMLDDP_01644 8.6e-75 K LytTr DNA-binding domain
DNIMLDDP_01645 2.6e-137 L Integrase core domain
DNIMLDDP_01646 1.6e-171 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
DNIMLDDP_01647 8.6e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DNIMLDDP_01648 2.3e-111 yjbM 2.7.6.5 S RelA SpoT domain protein
DNIMLDDP_01649 5.8e-112 yjbH Q Thioredoxin
DNIMLDDP_01650 1.6e-260 pipD E Dipeptidase
DNIMLDDP_01651 9.5e-197 coiA 3.6.4.12 S Competence protein
DNIMLDDP_01652 3e-119 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
DNIMLDDP_01653 1e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DNIMLDDP_01654 1.8e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
DNIMLDDP_01655 6e-73 L PFAM Integrase catalytic region
DNIMLDDP_01656 3.7e-193 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DNIMLDDP_01657 2.3e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
DNIMLDDP_01658 1.2e-126 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
DNIMLDDP_01659 6.8e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DNIMLDDP_01660 8.4e-171 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
DNIMLDDP_01661 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
DNIMLDDP_01662 9.7e-283 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
DNIMLDDP_01663 2.4e-192 V Beta-lactamase
DNIMLDDP_01664 1.6e-94 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DNIMLDDP_01665 9.2e-104 yhiD S MgtC family
DNIMLDDP_01666 3.5e-117 S GyrI-like small molecule binding domain
DNIMLDDP_01668 2.8e-109 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
DNIMLDDP_01669 3.2e-50 azlD E Branched-chain amino acid transport
DNIMLDDP_01670 4.1e-119 azlC E azaleucine resistance protein AzlC
DNIMLDDP_01671 1.7e-257 K Aminotransferase class I and II
DNIMLDDP_01672 1e-218 S amidohydrolase
DNIMLDDP_01673 5.3e-176 fecB P Periplasmic binding protein
DNIMLDDP_01674 5e-134 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
DNIMLDDP_01675 4.6e-129 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DNIMLDDP_01676 2.5e-77 S Flavodoxin
DNIMLDDP_01677 3.5e-62 moaE 2.8.1.12 H MoaE protein
DNIMLDDP_01678 3.9e-32 moaD 2.8.1.12 H ThiS family
DNIMLDDP_01679 1.1e-129 narK P Transporter, major facilitator family protein
DNIMLDDP_01680 1e-60 narK P Transporter, major facilitator family protein
DNIMLDDP_01681 5.1e-154 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
DNIMLDDP_01682 1.4e-181
DNIMLDDP_01683 1.6e-18
DNIMLDDP_01684 2.4e-17 nreC K PFAM regulatory protein LuxR
DNIMLDDP_01685 3.9e-159 mleR K LysR family
DNIMLDDP_01686 3.6e-252 yjjP S Putative threonine/serine exporter
DNIMLDDP_01687 1e-116 ung2 3.2.2.27 L Uracil-DNA glycosylase
DNIMLDDP_01688 6.5e-271 emrY EGP Major facilitator Superfamily
DNIMLDDP_01689 9.4e-186 I Alpha beta
DNIMLDDP_01690 9.8e-103 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
DNIMLDDP_01691 3.8e-96 ltrA_1 L Reverse transcriptase (RNA-dependent DNA polymerase)
DNIMLDDP_01692 0.0 lacS G Transporter
DNIMLDDP_01693 2.3e-28
DNIMLDDP_01694 7.1e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DNIMLDDP_01695 2.4e-286 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DNIMLDDP_01696 4.4e-190 yeaN P Transporter, major facilitator family protein
DNIMLDDP_01697 2.7e-73 S 3-demethylubiquinone-9 3-methyltransferase
DNIMLDDP_01698 2.7e-82 nrdI F Belongs to the NrdI family
DNIMLDDP_01699 1.6e-236 yhdP S Transporter associated domain
DNIMLDDP_01700 1.1e-153 ypdB V (ABC) transporter
DNIMLDDP_01701 2.5e-89 1.14.14.47, 1.6.5.3, 1.6.99.3 GM epimerase
DNIMLDDP_01702 1.1e-89 M1-874 K Domain of unknown function (DUF1836)
DNIMLDDP_01703 2.3e-78 yybA 2.3.1.57 K Transcriptional regulator
DNIMLDDP_01704 1.7e-131 XK27_07210 6.1.1.6 S B3 4 domain
DNIMLDDP_01705 2.6e-160 S AI-2E family transporter
DNIMLDDP_01706 1.3e-156 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
DNIMLDDP_01707 4.9e-160
DNIMLDDP_01708 1e-133 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
DNIMLDDP_01709 3.6e-138 eutJ E Hsp70 protein
DNIMLDDP_01710 8.3e-159 K helix_turn_helix, arabinose operon control protein
DNIMLDDP_01711 1.6e-37 pduA_4 CQ BMC
DNIMLDDP_01712 2.7e-134 pduB E BMC
DNIMLDDP_01713 0.0 pduC 4.2.1.28 Q Dehydratase large subunit
DNIMLDDP_01714 3.9e-125 pduD 4.2.1.28, 4.2.1.30 Q Dehydratase medium subunit
DNIMLDDP_01715 2.4e-71 pduE 4.2.1.28 Q Dehydratase small subunit
DNIMLDDP_01716 5.6e-309 pduG D Diol dehydratase reactivase ATPase-like domain
DNIMLDDP_01717 2.6e-45 pduH S Dehydratase medium subunit
DNIMLDDP_01718 1.8e-56 pduK CQ BMC
DNIMLDDP_01719 7.8e-40 pduA_4 CQ BMC
DNIMLDDP_01720 1.9e-115 pduL 2.3.1.222, 2.3.1.8 Q Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
DNIMLDDP_01721 1.3e-79 S Putative propanediol utilisation
DNIMLDDP_01722 5.2e-41 ccmL CQ Ethanolamine utilisation protein EutN/carboxysome
DNIMLDDP_01723 1e-102 pduO 2.5.1.17 S Cobalamin adenosyltransferase
DNIMLDDP_01724 4.5e-77 pduO S Haem-degrading
DNIMLDDP_01725 3.1e-262 pduP 1.2.1.87 C Aldehyde dehydrogenase family
DNIMLDDP_01726 2.1e-202 pduQ C Iron-containing alcohol dehydrogenase
DNIMLDDP_01727 2.5e-217 ackA 2.7.2.1, 2.7.2.15 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DNIMLDDP_01728 3e-54 pduU E BMC
DNIMLDDP_01729 1.1e-115 3.1.3.48 T Pfam:Y_phosphatase3C
DNIMLDDP_01730 1.9e-75 pgm1 3.1.3.73 G phosphoglycerate mutase
DNIMLDDP_01731 5.9e-68 P Cadmium resistance transporter
DNIMLDDP_01732 2.6e-68 eutP E Ethanolamine utilisation - propanediol utilisation
DNIMLDDP_01733 2.2e-73 fld C Flavodoxin
DNIMLDDP_01734 8.7e-116 XK27_04590 S NADPH-dependent FMN reductase
DNIMLDDP_01735 3.2e-77 cobO 2.5.1.17 S Cobalamin adenosyltransferase
DNIMLDDP_01736 6.1e-170 cobD 4.1.1.81 E Aminotransferase class I and II
DNIMLDDP_01737 7.3e-205 cbiA 6.3.5.11, 6.3.5.9 F Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
DNIMLDDP_01738 4.9e-147 cobD 6.3.1.10 H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
DNIMLDDP_01739 3.8e-109 cbiC 5.4.99.60, 5.4.99.61 H Precorrin-8X methylmutase
DNIMLDDP_01740 6.4e-186 cbiD 2.1.1.195 H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
DNIMLDDP_01741 1.6e-79 cbiE 2.1.1.132, 2.1.1.289 H Tetrapyrrole (Corrin/Porphyrin) Methylases
DNIMLDDP_01742 1.4e-77 cbiT 2.1.1.132, 2.1.1.196 H Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
DNIMLDDP_01743 8.1e-129 cobM 1.3.1.76, 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 4.99.1.4 H Tetrapyrrole (Corrin/Porphyrin) Methylases
DNIMLDDP_01744 3e-145 cbiG 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12 H Cobalamin synthesis G C-terminus
DNIMLDDP_01745 6.6e-128 cobJ 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 6.3.5.10 H Tetrapyrrole (Corrin/Porphyrin) Methylases
DNIMLDDP_01746 2.8e-97 cobK 1.3.1.106, 1.3.1.54, 2.1.1.195 H Precorrin-6x reductase CbiJ/CobK
DNIMLDDP_01747 2.8e-175 cobA 2.1.1.107, 4.2.1.75 H Tetrapyrrole (Corrin/Porphyrin) Methylases
DNIMLDDP_01748 8.1e-108 cbiK 4.99.1.3 H Cobalt chelatase (CbiK)
DNIMLDDP_01749 8.1e-91 cobI 2.1.1.130, 2.1.1.151, 4.99.1.3 H Tetrapyrrole (Corrin/Porphyrin) Methylases
DNIMLDDP_01750 1e-123 cbiM P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
DNIMLDDP_01751 7.6e-44 cbiN P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
DNIMLDDP_01752 6.8e-103 cbiQ P Cobalt transport protein
DNIMLDDP_01753 7.8e-122 cbiO 2.1.1.195 P part of an ABC transporter complex. Responsible for energy coupling to the transport system
DNIMLDDP_01754 2.7e-240 cobQ 6.3.5.10 H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
DNIMLDDP_01755 1.6e-58 cysG 1.3.1.76, 4.99.1.4 H Putative NAD(P)-binding
DNIMLDDP_01756 1.7e-192 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
DNIMLDDP_01757 2.6e-137 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
DNIMLDDP_01758 2.8e-174 hemB 4.2.1.24 H Delta-aminolevulinic acid dehydratase
DNIMLDDP_01759 1.1e-239 hemL 5.4.3.8 H Aminotransferase class-III
DNIMLDDP_01760 1.6e-76 cobU 2.7.1.156, 2.7.7.62, 6.3.5.10 H Cobinamide kinase / cobinamide phosphate guanyltransferase
DNIMLDDP_01761 2.2e-118 cobS 2.7.8.26 H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
DNIMLDDP_01762 5.8e-74 gpm 3.1.3.73, 5.4.2.12 G Belongs to the phosphoglycerate mutase family
DNIMLDDP_01763 6.5e-64 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
DNIMLDDP_01764 1.3e-145 cobT 2.4.2.21, 6.3.5.11, 6.3.5.9 F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
DNIMLDDP_01765 4e-28
DNIMLDDP_01766 1e-99 K DNA-templated transcription, initiation
DNIMLDDP_01767 6.6e-37
DNIMLDDP_01768 1.4e-84
DNIMLDDP_01769 3.6e-290 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DNIMLDDP_01770 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
DNIMLDDP_01771 2.3e-294 yjbQ P TrkA C-terminal domain protein
DNIMLDDP_01772 9.3e-272 pipD E Dipeptidase
DNIMLDDP_01773 1.7e-38 ykuJ S Protein of unknown function (DUF1797)
DNIMLDDP_01774 3.3e-178 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DNIMLDDP_01775 4.5e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
DNIMLDDP_01776 2.7e-227 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
DNIMLDDP_01777 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DNIMLDDP_01778 2.7e-39 ptsH G phosphocarrier protein HPR
DNIMLDDP_01779 3.3e-40 L Type III restriction enzyme, res subunit
DNIMLDDP_01780 1.3e-09
DNIMLDDP_01781 5.2e-43 S SIR2-like domain
DNIMLDDP_01782 4.6e-36 yhaI S Protein of unknown function (DUF805)
DNIMLDDP_01783 8.5e-44
DNIMLDDP_01784 2.4e-22
DNIMLDDP_01785 2.1e-46
DNIMLDDP_01786 8.2e-23 S YSIRK type signal peptide
DNIMLDDP_01787 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DNIMLDDP_01788 6.2e-216 ecsB U ABC transporter
DNIMLDDP_01789 1.8e-136 ecsA V ABC transporter, ATP-binding protein
DNIMLDDP_01790 3.2e-77 hit FG histidine triad
DNIMLDDP_01792 8.5e-128 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DNIMLDDP_01793 6e-32
DNIMLDDP_01794 9.5e-18
DNIMLDDP_01795 8.9e-64
DNIMLDDP_01796 7.9e-34
DNIMLDDP_01797 1.8e-206 potD P ABC transporter
DNIMLDDP_01798 2.5e-139 potC P ABC transporter permease
DNIMLDDP_01799 1.3e-145 potB P ABC transporter permease
DNIMLDDP_01800 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DNIMLDDP_01801 1.2e-23
DNIMLDDP_01802 8.7e-41 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DNIMLDDP_01803 9.6e-44
DNIMLDDP_01804 5.8e-169 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
DNIMLDDP_01805 4.5e-250 mmuP E amino acid
DNIMLDDP_01808 3.8e-159 metQ_4 P Belongs to the nlpA lipoprotein family
DNIMLDDP_01809 9.7e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DNIMLDDP_01810 1e-122 O Zinc-dependent metalloprotease
DNIMLDDP_01811 9.6e-56 L Helix-turn-helix domain
DNIMLDDP_01812 4.6e-64 S Alpha beta hydrolase
DNIMLDDP_01813 3.1e-43 S Alpha beta hydrolase
DNIMLDDP_01814 2.4e-215 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DNIMLDDP_01815 1.7e-97
DNIMLDDP_01817 1.3e-122 yciB M ErfK YbiS YcfS YnhG
DNIMLDDP_01818 6.3e-148 L Transposase IS66 family
DNIMLDDP_01819 5.9e-113 L Transposase IS66 family
DNIMLDDP_01821 6.8e-36 XK27_01125 L PFAM IS66 Orf2 family protein
DNIMLDDP_01822 1.2e-280 L Transposase IS66 family
DNIMLDDP_01823 4.3e-13
DNIMLDDP_01824 8.2e-205 cytX U Belongs to the purine-cytosine permease (2.A.39) family
DNIMLDDP_01825 1.7e-95 ltrA S Bacterial low temperature requirement A protein (LtrA)
DNIMLDDP_01826 1.5e-42 wecD3 K PFAM GCN5-related N-acetyltransferase
DNIMLDDP_01827 1.3e-14 K Cro/C1-type HTH DNA-binding domain
DNIMLDDP_01831 1.7e-263 dtpT U amino acid peptide transporter
DNIMLDDP_01832 2.2e-148 yjjH S Calcineurin-like phosphoesterase
DNIMLDDP_01835 3.6e-109
DNIMLDDP_01836 6.5e-249 EGP Major facilitator Superfamily
DNIMLDDP_01837 1.1e-300 aspT P Predicted Permease Membrane Region
DNIMLDDP_01838 2.2e-131 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
DNIMLDDP_01839 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
DNIMLDDP_01840 3.1e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DNIMLDDP_01841 2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
DNIMLDDP_01842 0.0 yhgF K Tex-like protein N-terminal domain protein
DNIMLDDP_01843 8.1e-84 ydcK S Belongs to the SprT family
DNIMLDDP_01845 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
DNIMLDDP_01846 2.9e-184 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
DNIMLDDP_01847 0.0 S Bacterial membrane protein, YfhO
DNIMLDDP_01848 3e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DNIMLDDP_01849 2.3e-167 I alpha/beta hydrolase fold
DNIMLDDP_01850 5e-215 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
DNIMLDDP_01851 1.1e-119 tcyB E ABC transporter
DNIMLDDP_01852 1.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNIMLDDP_01853 6.2e-140 tcyA ET Belongs to the bacterial solute-binding protein 3 family
DNIMLDDP_01854 1.5e-266 pepC 3.4.22.40 E Peptidase C1-like family
DNIMLDDP_01855 1.3e-125 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DNIMLDDP_01856 1.9e-49 HA62_12640 S GCN5-related N-acetyl-transferase
DNIMLDDP_01857 7.3e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
DNIMLDDP_01858 5e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DNIMLDDP_01859 4.7e-205 yacL S domain protein
DNIMLDDP_01860 4.7e-271 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
DNIMLDDP_01861 2.1e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DNIMLDDP_01862 2.3e-136 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DNIMLDDP_01863 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
DNIMLDDP_01864 1.4e-15 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DNIMLDDP_01865 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
DNIMLDDP_01866 2.4e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DNIMLDDP_01867 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DNIMLDDP_01868 5.6e-225 aadAT EK Aminotransferase, class I
DNIMLDDP_01870 6.7e-19 M Glycosyl transferase family group 2
DNIMLDDP_01871 1.5e-178 M Glycosyl transferase family group 2
DNIMLDDP_01872 4.4e-208 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
DNIMLDDP_01873 4.9e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DNIMLDDP_01874 5.4e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DNIMLDDP_01875 2e-26
DNIMLDDP_01877 3.2e-38 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DNIMLDDP_01878 5.2e-23 K transcriptional regulator PadR family
DNIMLDDP_01879 2.1e-101 L Bacterial dnaA protein
DNIMLDDP_01880 4.4e-229 L Integrase core domain
DNIMLDDP_01881 6.5e-39 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DNIMLDDP_01882 8.6e-33 K transcriptional regulator PadR family
DNIMLDDP_01883 1.2e-82 XK27_06920 S Protein of unknown function (DUF1700)
DNIMLDDP_01884 5.4e-133 S Putative adhesin
DNIMLDDP_01885 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DNIMLDDP_01886 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNIMLDDP_01887 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DNIMLDDP_01888 3.4e-35 nrdH O Glutaredoxin
DNIMLDDP_01889 1e-87 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DNIMLDDP_01890 4.3e-285 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DNIMLDDP_01891 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DNIMLDDP_01892 5.3e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DNIMLDDP_01893 2.8e-38 S Protein of unknown function (DUF2508)
DNIMLDDP_01894 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DNIMLDDP_01895 2.9e-51 yaaQ S Cyclic-di-AMP receptor
DNIMLDDP_01896 1e-179 holB 2.7.7.7 L DNA polymerase III
DNIMLDDP_01897 3.1e-43 yabA L Involved in initiation control of chromosome replication
DNIMLDDP_01898 2.9e-154 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DNIMLDDP_01899 1.6e-132 fat 3.1.2.21 I Acyl-ACP thioesterase
DNIMLDDP_01900 6e-64 gntR1 K Transcriptional regulator, GntR family
DNIMLDDP_01901 4.4e-155 V ABC transporter, ATP-binding protein
DNIMLDDP_01902 7.1e-116
DNIMLDDP_01903 3.4e-140 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
DNIMLDDP_01904 1.7e-100 S Pfam:DUF3816
DNIMLDDP_01905 1e-182
DNIMLDDP_01906 6.4e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DNIMLDDP_01907 5.8e-184 S Phosphotransferase system, EIIC
DNIMLDDP_01911 7.2e-128 tesE Q hydratase
DNIMLDDP_01912 8.8e-117 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DNIMLDDP_01914 6.1e-57
DNIMLDDP_01915 0.0 S Peptidase, M23
DNIMLDDP_01916 2.5e-36
DNIMLDDP_01917 0.0 yhcA V ABC transporter, ATP-binding protein
DNIMLDDP_01918 1.1e-26
DNIMLDDP_01919 0.0 clpE O Belongs to the ClpA ClpB family
DNIMLDDP_01920 6.6e-254 yifK E Amino acid permease
DNIMLDDP_01942 8.7e-65 XK27_01125 L PFAM IS66 Orf2 family protein
DNIMLDDP_01943 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DNIMLDDP_01944 1.6e-66 gadC E amino acid
DNIMLDDP_01945 4.6e-156 gadC E amino acid
DNIMLDDP_01946 1.1e-275 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
DNIMLDDP_01947 4.3e-234 pbuG S permease
DNIMLDDP_01948 5.3e-231 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DNIMLDDP_01949 3.1e-13 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DNIMLDDP_01950 5.3e-33 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
DNIMLDDP_01951 1.2e-258 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
DNIMLDDP_01952 1e-139 S Belongs to the UPF0246 family
DNIMLDDP_01953 1.5e-22 S Membrane
DNIMLDDP_01954 6.3e-96 S Membrane
DNIMLDDP_01955 8.1e-75 4.4.1.5 E Glyoxalase
DNIMLDDP_01956 4.5e-21
DNIMLDDP_01957 2.7e-85 yueI S Protein of unknown function (DUF1694)
DNIMLDDP_01958 1.4e-234 rarA L recombination factor protein RarA
DNIMLDDP_01959 1.3e-45
DNIMLDDP_01960 4.3e-83 usp6 T universal stress protein
DNIMLDDP_01961 5.9e-205 araR K Transcriptional regulator
DNIMLDDP_01962 2.5e-155 ytbE 1.1.1.346 S Aldo keto reductase
DNIMLDDP_01963 2.4e-90 maa 2.3.1.79 S Maltose O-acetyltransferase
DNIMLDDP_01964 1.4e-283 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
DNIMLDDP_01965 3.7e-139 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
DNIMLDDP_01966 0.0 araB 2.7.1.12, 2.7.1.16 G carbohydrate kinase FGGY
DNIMLDDP_01967 1.2e-261 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
DNIMLDDP_01968 3.7e-146 2.3.1.19 K Helix-turn-helix XRE-family like proteins
DNIMLDDP_01969 5.3e-217 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
DNIMLDDP_01970 1.4e-47 gcvH E glycine cleavage
DNIMLDDP_01971 4.1e-220 rodA D Belongs to the SEDS family
DNIMLDDP_01972 1e-31 S Protein of unknown function (DUF2969)
DNIMLDDP_01973 1.9e-178 mbl D Cell shape determining protein MreB Mrl
DNIMLDDP_01974 2.3e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DNIMLDDP_01975 1.3e-33 ywzB S Protein of unknown function (DUF1146)
DNIMLDDP_01976 1e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
DNIMLDDP_01977 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DNIMLDDP_01978 7.4e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DNIMLDDP_01979 1.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DNIMLDDP_01980 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DNIMLDDP_01981 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DNIMLDDP_01982 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DNIMLDDP_01983 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
DNIMLDDP_01984 5.9e-233 pyrP F Permease
DNIMLDDP_01985 2.6e-130 yibF S overlaps another CDS with the same product name
DNIMLDDP_01986 4.4e-192 yibE S overlaps another CDS with the same product name
DNIMLDDP_01987 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DNIMLDDP_01988 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DNIMLDDP_01989 2.3e-229 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DNIMLDDP_01990 1.4e-195 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
DNIMLDDP_01991 6.6e-167 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DNIMLDDP_01992 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DNIMLDDP_01993 6e-108 tdk 2.7.1.21 F thymidine kinase
DNIMLDDP_01994 4.1e-261 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
DNIMLDDP_01995 7.1e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
DNIMLDDP_01996 3e-10
DNIMLDDP_01997 6.1e-223 arcD U Amino acid permease
DNIMLDDP_01998 4.1e-259 E Arginine ornithine antiporter
DNIMLDDP_01999 2.7e-79 argR K Regulates arginine biosynthesis genes
DNIMLDDP_02000 5.8e-217 arcA 3.5.3.6 E Arginine
DNIMLDDP_02001 5.3e-184 ampC V Beta-lactamase
DNIMLDDP_02002 1.8e-19
DNIMLDDP_02003 4.2e-234 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DNIMLDDP_02004 4e-153 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
DNIMLDDP_02005 3.5e-117 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
DNIMLDDP_02006 2e-09 IQ KR domain
DNIMLDDP_02007 4e-34 IQ KR domain
DNIMLDDP_02008 3.3e-133 S membrane transporter protein
DNIMLDDP_02009 4.7e-114 I alpha/beta hydrolase fold
DNIMLDDP_02010 8.5e-20 K Helix-turn-helix XRE-family like proteins
DNIMLDDP_02011 7.6e-23 S Phage derived protein Gp49-like (DUF891)
DNIMLDDP_02012 6.8e-54
DNIMLDDP_02013 2.6e-112 frnE Q DSBA-like thioredoxin domain
DNIMLDDP_02014 8.7e-156 L Transposase
DNIMLDDP_02019 2.9e-151 S Phosphotransferase system, EIIC
DNIMLDDP_02020 4.9e-265 L PFAM Integrase catalytic region
DNIMLDDP_02021 2.6e-29
DNIMLDDP_02022 8.8e-35 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DNIMLDDP_02023 2.2e-146 ykuT M mechanosensitive ion channel
DNIMLDDP_02024 1e-153 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
DNIMLDDP_02025 1.1e-74 ykuL S (CBS) domain
DNIMLDDP_02026 1.7e-93 S Phosphoesterase
DNIMLDDP_02027 9.8e-106 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DNIMLDDP_02028 3.1e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
DNIMLDDP_02029 1.6e-97 yslB S Protein of unknown function (DUF2507)
DNIMLDDP_02030 1.8e-53 trxA O Belongs to the thioredoxin family
DNIMLDDP_02031 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DNIMLDDP_02032 2.7e-86 cvpA S Colicin V production protein
DNIMLDDP_02033 6.1e-48 yrzB S Belongs to the UPF0473 family
DNIMLDDP_02034 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DNIMLDDP_02035 4.1e-43 yrzL S Belongs to the UPF0297 family
DNIMLDDP_02036 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DNIMLDDP_02037 3.7e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
DNIMLDDP_02038 3.2e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
DNIMLDDP_02039 6.2e-31 yajC U Preprotein translocase
DNIMLDDP_02040 5.9e-189 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
DNIMLDDP_02041 2.9e-190 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DNIMLDDP_02042 4.3e-101 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DNIMLDDP_02043 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DNIMLDDP_02044 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DNIMLDDP_02045 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
DNIMLDDP_02046 1.9e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DNIMLDDP_02047 1.4e-226 cinA 3.5.1.42 S Belongs to the CinA family
DNIMLDDP_02048 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DNIMLDDP_02049 1.7e-137 ymfM S Helix-turn-helix domain
DNIMLDDP_02050 2.5e-247 ymfH S Peptidase M16
DNIMLDDP_02051 1.6e-227 ymfF S Peptidase M16 inactive domain protein
DNIMLDDP_02052 2.9e-159 aatB ET ABC transporter substrate-binding protein
DNIMLDDP_02053 1.2e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DNIMLDDP_02054 4.2e-102 glnP P ABC transporter permease
DNIMLDDP_02055 8.7e-93 mreD M rod shape-determining protein MreD
DNIMLDDP_02056 3.5e-152 mreC M Involved in formation and maintenance of cell shape
DNIMLDDP_02057 1.7e-179 mreB D cell shape determining protein MreB
DNIMLDDP_02058 8e-122 radC L DNA repair protein
DNIMLDDP_02059 2.5e-242 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
DNIMLDDP_02060 1.8e-231 ndh 1.6.99.3 C NADH dehydrogenase
DNIMLDDP_02061 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DNIMLDDP_02062 7e-311 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
DNIMLDDP_02063 4.5e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
DNIMLDDP_02064 7.2e-272 cydA 1.10.3.14 C ubiquinol oxidase
DNIMLDDP_02065 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DNIMLDDP_02066 3.2e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DNIMLDDP_02067 8.6e-215 iscS2 2.8.1.7 E Aminotransferase class V
DNIMLDDP_02068 9.7e-239 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)