ORF_ID e_value Gene_name EC_number CAZy COGs Description
GKBPBIME_00001 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GKBPBIME_00003 1.1e-254 bmr3 EGP Major facilitator Superfamily
GKBPBIME_00004 1e-99 yobS K Bacterial regulatory proteins, tetR family
GKBPBIME_00005 1.3e-245 yhgE V domain protein
GKBPBIME_00006 4e-47 S Thiamine-binding protein
GKBPBIME_00007 3.2e-138 magIII L Base excision DNA repair protein, HhH-GPD family
GKBPBIME_00008 1.1e-158 pphA 3.1.3.16 T Calcineurin-like phosphoesterase superfamily domain
GKBPBIME_00009 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GKBPBIME_00010 1.1e-253 rarA L recombination factor protein RarA
GKBPBIME_00011 1.2e-57
GKBPBIME_00012 7.7e-172 yhaI S Protein of unknown function (DUF805)
GKBPBIME_00013 1.7e-268 L Mga helix-turn-helix domain
GKBPBIME_00015 1.1e-182 ynjC S Cell surface protein
GKBPBIME_00016 3.8e-123 S WxL domain surface cell wall-binding
GKBPBIME_00017 1.3e-121 S WxL domain surface cell wall-binding
GKBPBIME_00019 0.0
GKBPBIME_00020 5.8e-103 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GKBPBIME_00021 4.9e-29
GKBPBIME_00022 1.7e-179 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GKBPBIME_00023 6.3e-46 S DsrE/DsrF-like family
GKBPBIME_00024 9.1e-254 pbuO S permease
GKBPBIME_00025 1.4e-41 S Protein of unknown function (DUF1516)
GKBPBIME_00026 2e-53 ypaA S Protein of unknown function (DUF1304)
GKBPBIME_00027 2e-161 1.6.5.5 C alcohol dehydrogenase
GKBPBIME_00028 3.2e-81 slyA K Transcriptional regulator
GKBPBIME_00029 2.3e-42
GKBPBIME_00030 1.1e-192 ldhD3 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GKBPBIME_00031 2.6e-88 ogt 2.1.1.63 L Methyltransferase
GKBPBIME_00032 4e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GKBPBIME_00033 1.5e-42
GKBPBIME_00034 7.3e-208 mccF V LD-carboxypeptidase
GKBPBIME_00035 1.8e-181 I PAP2 superfamily
GKBPBIME_00036 4.8e-42 S Protein of unknown function (DUF2089)
GKBPBIME_00037 1e-36
GKBPBIME_00038 2.4e-256 C COG0277 FAD FMN-containing dehydrogenases
GKBPBIME_00039 5.5e-141 T Calcineurin-like phosphoesterase superfamily domain
GKBPBIME_00040 3.3e-258
GKBPBIME_00041 2.4e-99 K Bacteriophage CI repressor helix-turn-helix domain
GKBPBIME_00043 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
GKBPBIME_00044 2.7e-132 S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
GKBPBIME_00045 1e-165 yxlF V ABC transporter
GKBPBIME_00046 4.8e-34 S Phospholipase_D-nuclease N-terminal
GKBPBIME_00047 4.3e-203 K Helix-turn-helix XRE-family like proteins
GKBPBIME_00048 2.3e-159 lysR5 K LysR substrate binding domain
GKBPBIME_00049 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
GKBPBIME_00050 1.1e-56 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
GKBPBIME_00051 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
GKBPBIME_00052 2.4e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GKBPBIME_00053 1.8e-119 K Helix-turn-helix domain, rpiR family
GKBPBIME_00054 7.6e-129 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GKBPBIME_00055 1.1e-273 sacX 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GKBPBIME_00056 5.4e-217
GKBPBIME_00057 4.6e-247 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GKBPBIME_00058 9e-75 rplI J Binds to the 23S rRNA
GKBPBIME_00059 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GKBPBIME_00060 3.7e-94 V ABC transporter, ATP-binding protein
GKBPBIME_00061 1.9e-47 V ATPases associated with a variety of cellular activities
GKBPBIME_00062 9.2e-253 gshR 1.8.1.7 C Glutathione reductase
GKBPBIME_00063 1.7e-176 proV E ABC transporter, ATP-binding protein
GKBPBIME_00064 2.9e-274 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GKBPBIME_00066 0.0 helD 3.6.4.12 L DNA helicase
GKBPBIME_00067 8.6e-148 rlrG K Transcriptional regulator
GKBPBIME_00068 4.5e-172 shetA P Voltage-dependent anion channel
GKBPBIME_00069 2.8e-114 S CAAX protease self-immunity
GKBPBIME_00071 1.6e-115 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GKBPBIME_00072 4e-69 K MarR family
GKBPBIME_00073 0.0 uvrA3 L excinuclease ABC
GKBPBIME_00074 8.1e-193 yghZ C Aldo keto reductase family protein
GKBPBIME_00075 7.3e-144 S hydrolase
GKBPBIME_00076 8.1e-60
GKBPBIME_00077 4.1e-11
GKBPBIME_00078 6.2e-104 yoaK S Protein of unknown function (DUF1275)
GKBPBIME_00079 6.4e-125 yjhF G Phosphoglycerate mutase family
GKBPBIME_00080 4.3e-152 yitU 3.1.3.104 S hydrolase
GKBPBIME_00081 9.8e-88 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GKBPBIME_00082 1.7e-165 K LysR substrate binding domain
GKBPBIME_00083 1.3e-226 EK Aminotransferase, class I
GKBPBIME_00084 4.9e-181 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GKBPBIME_00085 2e-118 ydfK S Protein of unknown function (DUF554)
GKBPBIME_00086 2.5e-88
GKBPBIME_00087 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GKBPBIME_00088 3.3e-172 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
GKBPBIME_00089 2.8e-129 rpl K Helix-turn-helix domain, rpiR family
GKBPBIME_00090 1.2e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GKBPBIME_00091 1.9e-132 L Transposase, IS116 IS110 IS902 family
GKBPBIME_00093 1.1e-293 plyA3 M Right handed beta helix region
GKBPBIME_00094 8.5e-62
GKBPBIME_00095 0.0 M Heparinase II/III N-terminus
GKBPBIME_00097 5.1e-81 G PTS system fructose IIA component
GKBPBIME_00098 5.6e-144 agaD G PTS system mannose/fructose/sorbose family IID component
GKBPBIME_00099 4.3e-144 G PTS system sorbose-specific iic component
GKBPBIME_00100 1.2e-88 agaV 2.7.1.191 G PTS system sorbose subfamily IIB component
GKBPBIME_00101 2e-235 ugl 3.2.1.180 GH88 S Glycosyl Hydrolase Family 88
GKBPBIME_00102 4.5e-157 Z012_03480 S Psort location Cytoplasmic, score
GKBPBIME_00103 5.1e-139 K Bacterial transcriptional regulator
GKBPBIME_00104 7.3e-163 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
GKBPBIME_00105 4.8e-151 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GKBPBIME_00106 1.8e-116 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
GKBPBIME_00107 1.5e-194 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
GKBPBIME_00108 3.5e-117 alkD L DNA alkylation repair enzyme
GKBPBIME_00109 3.4e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GKBPBIME_00110 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GKBPBIME_00111 1.2e-169 ykoT GT2 M Glycosyl transferase family 2
GKBPBIME_00112 1.4e-119 lssY 3.6.1.27 I phosphatase
GKBPBIME_00113 8e-117 dedA S SNARE-like domain protein
GKBPBIME_00114 1e-238 T PhoQ Sensor
GKBPBIME_00115 1.6e-126 K Transcriptional regulatory protein, C terminal
GKBPBIME_00117 1.5e-17
GKBPBIME_00118 2e-238 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
GKBPBIME_00119 1e-182 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
GKBPBIME_00120 4.4e-104 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
GKBPBIME_00121 0.0 4.2.2.1 PL8 N Polysaccharide lyase family 8, N terminal alpha-helical domain
GKBPBIME_00122 5.4e-192 S Protein of unknown function C-terminal (DUF3324)
GKBPBIME_00123 1.2e-87
GKBPBIME_00124 2e-18 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GKBPBIME_00125 1.3e-116 sodA 1.15.1.1 C Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GKBPBIME_00126 1.3e-157 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GKBPBIME_00127 8.9e-158 I alpha/beta hydrolase fold
GKBPBIME_00128 1.6e-28
GKBPBIME_00129 9.3e-74
GKBPBIME_00130 6.8e-153 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
GKBPBIME_00131 1.1e-124 citR K FCD
GKBPBIME_00132 3.4e-266 oadA 2.1.3.1, 4.1.1.3, 6.4.1.1, 6.4.1.7 C Conserved carboxylase domain
GKBPBIME_00133 6.9e-93 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
GKBPBIME_00134 5.9e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
GKBPBIME_00135 9e-156 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
GKBPBIME_00136 1.3e-48 citD C Covalent carrier of the coenzyme of citrate lyase
GKBPBIME_00137 1e-179 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
GKBPBIME_00139 1.8e-196 oadB 4.1.1.3 C Na+-transporting oxaloacetate decarboxylase beta subunit
GKBPBIME_00140 6.2e-40 gcdC 2.3.1.12 I Biotin-requiring enzyme
GKBPBIME_00141 1.2e-52
GKBPBIME_00142 4.8e-241 citM C Citrate transporter
GKBPBIME_00143 2.8e-41
GKBPBIME_00144 5.1e-104 kptA J Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
GKBPBIME_00145 1.6e-88 K GNAT family
GKBPBIME_00146 1.2e-106 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GKBPBIME_00147 9.7e-58 K Transcriptional regulator PadR-like family
GKBPBIME_00148 1.2e-88 ORF00048
GKBPBIME_00149 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
GKBPBIME_00150 2.6e-169 yjjC V ABC transporter
GKBPBIME_00151 2.9e-293 M Exporter of polyketide antibiotics
GKBPBIME_00152 9.6e-115 K Transcriptional regulator
GKBPBIME_00153 4.1e-259 EGP Major facilitator Superfamily
GKBPBIME_00154 6.2e-126 S membrane transporter protein
GKBPBIME_00155 9.5e-181 K Helix-turn-helix XRE-family like proteins
GKBPBIME_00156 1.3e-159 S Alpha beta hydrolase
GKBPBIME_00157 1.2e-59 yvoA_1 K Transcriptional regulator, GntR family
GKBPBIME_00158 1.1e-124 skfE V ATPases associated with a variety of cellular activities
GKBPBIME_00159 6.7e-19
GKBPBIME_00160 2.6e-141
GKBPBIME_00161 1.1e-87 V ATPases associated with a variety of cellular activities
GKBPBIME_00162 6.7e-96 ydaF J Acetyltransferase (GNAT) domain
GKBPBIME_00163 7.4e-158 oppF P Oligopeptide/dipeptide transporter, C-terminal region
GKBPBIME_00164 9.6e-200 oppD P Oligopeptide/dipeptide transporter, C-terminal region
GKBPBIME_00165 8.5e-24
GKBPBIME_00166 7.4e-175 amiD EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
GKBPBIME_00167 4.2e-167 oppB P Binding-protein-dependent transport system inner membrane component
GKBPBIME_00168 6.9e-290 E Bacterial extracellular solute-binding proteins, family 5 Middle
GKBPBIME_00169 1.6e-128 hchA S DJ-1/PfpI family
GKBPBIME_00170 4.6e-52 K Transcriptional
GKBPBIME_00171 2.1e-36
GKBPBIME_00172 2.4e-131 V ABC transporter transmembrane region
GKBPBIME_00173 2.9e-88 V ABC transporter transmembrane region
GKBPBIME_00174 3.1e-215 V ABC transporter transmembrane region
GKBPBIME_00176 4.6e-67 S Iron-sulphur cluster biosynthesis
GKBPBIME_00177 1.4e-15 2.7.1.39 S Phosphotransferase enzyme family
GKBPBIME_00178 2.2e-253 lytN 3.5.1.104 M LysM domain
GKBPBIME_00179 3.4e-135 zmp3 O Zinc-dependent metalloprotease
GKBPBIME_00181 2.8e-129 repA K DeoR C terminal sensor domain
GKBPBIME_00184 1e-48 lciIC K Helix-turn-helix XRE-family like proteins
GKBPBIME_00185 1.5e-86 yjdB S Domain of unknown function (DUF4767)
GKBPBIME_00186 2.8e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GKBPBIME_00187 3.6e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GKBPBIME_00188 2.5e-280 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GKBPBIME_00189 8.6e-163 K Transcriptional regulator
GKBPBIME_00190 7.6e-199 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GKBPBIME_00193 2.1e-85 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GKBPBIME_00194 1.4e-50 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
GKBPBIME_00195 1.6e-266 gatC G PTS system sugar-specific permease component
GKBPBIME_00196 5.6e-26
GKBPBIME_00197 4.6e-123 S Domain of unknown function (DUF4867)
GKBPBIME_00198 4.9e-176 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
GKBPBIME_00199 2.5e-186 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
GKBPBIME_00200 2.9e-93 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
GKBPBIME_00201 2.7e-73 lacA 5.3.1.26 G Ribose/Galactose Isomerase
GKBPBIME_00202 4.2e-141 lacR K DeoR C terminal sensor domain
GKBPBIME_00203 3.8e-116 gph 3.1.3.18 S HAD hydrolase, family IA, variant
GKBPBIME_00204 6.2e-210 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
GKBPBIME_00205 0.0 sbcC L Putative exonuclease SbcCD, C subunit
GKBPBIME_00206 2.1e-14
GKBPBIME_00207 2.2e-76 hsp1 O Belongs to the small heat shock protein (HSP20) family
GKBPBIME_00209 4.2e-211 mutY L A G-specific adenine glycosylase
GKBPBIME_00210 2.5e-149 cytC6 I alpha/beta hydrolase fold
GKBPBIME_00211 2.1e-120 yrkL S Flavodoxin-like fold
GKBPBIME_00213 1.5e-86 S Short repeat of unknown function (DUF308)
GKBPBIME_00214 4.1e-118 S Psort location Cytoplasmic, score
GKBPBIME_00215 1.6e-154 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GKBPBIME_00216 1.4e-195
GKBPBIME_00217 3.9e-07
GKBPBIME_00218 1.5e-115 ywnB S NAD(P)H-binding
GKBPBIME_00219 0.0 bglB 3.2.1.21 GH3 G hydrolase, family 3
GKBPBIME_00220 6.1e-166 XK27_00670 S ABC transporter substrate binding protein
GKBPBIME_00221 3.1e-165 XK27_00670 S ABC transporter
GKBPBIME_00222 1.9e-154 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
GKBPBIME_00223 8.8e-142 cmpC S ABC transporter, ATP-binding protein
GKBPBIME_00224 8e-174 yhfP 1.1.1.1 C Zinc-binding dehydrogenase
GKBPBIME_00225 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
GKBPBIME_00226 6.2e-182 ykcC GT2 M Glycosyl transferase family 2
GKBPBIME_00227 0.0 ykcB M Dolichyl-phosphate-mannose-protein mannosyltransferase
GKBPBIME_00228 4.1e-71 S GtrA-like protein
GKBPBIME_00229 5.3e-124 K cheY-homologous receiver domain
GKBPBIME_00230 2.7e-241 ciaH 2.7.13.3 T His Kinase A (phosphoacceptor) domain
GKBPBIME_00231 3.1e-68 yqkB S Belongs to the HesB IscA family
GKBPBIME_00232 1.4e-92 QT PucR C-terminal helix-turn-helix domain
GKBPBIME_00233 1.4e-165 QT PucR C-terminal helix-turn-helix domain
GKBPBIME_00234 1.4e-161 ptlF S KR domain
GKBPBIME_00235 1.4e-158 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
GKBPBIME_00236 1.1e-121 drgA C Nitroreductase family
GKBPBIME_00237 1.2e-68 lctO C IMP dehydrogenase / GMP reductase domain
GKBPBIME_00238 1.1e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
GKBPBIME_00239 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GKBPBIME_00240 1.9e-107 K Bacterial regulatory proteins, tetR family
GKBPBIME_00241 2.1e-183 yxeA V FtsX-like permease family
GKBPBIME_00242 4.6e-126 devA 3.6.3.25 V ATPases associated with a variety of cellular activities
GKBPBIME_00243 1.1e-33
GKBPBIME_00244 1.3e-110 tipA K TipAS antibiotic-recognition domain
GKBPBIME_00245 1.1e-20 M1-1017
GKBPBIME_00246 8.2e-33 K Transcriptional regulator PadR-like family
GKBPBIME_00247 3.2e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GKBPBIME_00248 8.7e-142 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GKBPBIME_00249 6e-157 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GKBPBIME_00250 1.6e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GKBPBIME_00251 4.5e-115
GKBPBIME_00252 4.8e-61 rplQ J Ribosomal protein L17
GKBPBIME_00253 3.6e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GKBPBIME_00254 4e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GKBPBIME_00255 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GKBPBIME_00256 6.6e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GKBPBIME_00257 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GKBPBIME_00258 4.6e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GKBPBIME_00259 2e-231 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GKBPBIME_00260 6.5e-62 rplO J Binds to the 23S rRNA
GKBPBIME_00261 3.9e-24 rpmD J Ribosomal protein L30
GKBPBIME_00262 1.2e-83 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GKBPBIME_00263 1.8e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GKBPBIME_00264 1.7e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GKBPBIME_00265 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GKBPBIME_00266 8.5e-96 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GKBPBIME_00267 6.9e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GKBPBIME_00268 2.1e-58 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GKBPBIME_00269 1.9e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GKBPBIME_00270 1.1e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
GKBPBIME_00271 2.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GKBPBIME_00272 6.2e-109 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GKBPBIME_00273 1.1e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GKBPBIME_00274 2.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GKBPBIME_00275 2.9e-156 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GKBPBIME_00276 2e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GKBPBIME_00277 1.7e-108 rplD J Forms part of the polypeptide exit tunnel
GKBPBIME_00278 4e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GKBPBIME_00279 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GKBPBIME_00280 3.5e-68 psiE S Phosphate-starvation-inducible E
GKBPBIME_00281 1.9e-106 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
GKBPBIME_00282 1e-198 yfjR K WYL domain
GKBPBIME_00283 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GKBPBIME_00284 8.4e-84 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GKBPBIME_00285 1.2e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GKBPBIME_00286 0.0 M domain protein
GKBPBIME_00287 0.0 M domain protein
GKBPBIME_00288 3.1e-36 3.4.23.43
GKBPBIME_00289 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GKBPBIME_00290 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GKBPBIME_00291 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GKBPBIME_00292 4.3e-80 ctsR K Belongs to the CtsR family
GKBPBIME_00301 6.6e-11
GKBPBIME_00302 4e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
GKBPBIME_00303 6.4e-69 S COG NOG38524 non supervised orthologous group
GKBPBIME_00304 1.1e-62 yugI 5.3.1.9 J general stress protein
GKBPBIME_00305 2.5e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GKBPBIME_00306 7.9e-185 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
GKBPBIME_00307 6.7e-87 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
GKBPBIME_00308 5.2e-116 dedA S SNARE-like domain protein
GKBPBIME_00309 1.1e-112 S Protein of unknown function (DUF1461)
GKBPBIME_00310 2.8e-145 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GKBPBIME_00311 6e-117 yutD S Protein of unknown function (DUF1027)
GKBPBIME_00312 2.8e-265 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
GKBPBIME_00313 1.8e-115 S Calcineurin-like phosphoesterase
GKBPBIME_00314 1.4e-114 yibF S overlaps another CDS with the same product name
GKBPBIME_00315 9.8e-189 yibE S overlaps another CDS with the same product name
GKBPBIME_00316 6.1e-54
GKBPBIME_00317 1.1e-258 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GKBPBIME_00318 3.8e-273 pepV 3.5.1.18 E dipeptidase PepV
GKBPBIME_00319 9.5e-138 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GKBPBIME_00320 1.1e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S HAD-hyrolase-like
GKBPBIME_00321 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
GKBPBIME_00322 5.1e-179 ccpA K catabolite control protein A
GKBPBIME_00323 6.3e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GKBPBIME_00324 3e-90 niaR S 3H domain
GKBPBIME_00325 2.7e-86 ytxH S YtxH-like protein
GKBPBIME_00326 6e-12 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GKBPBIME_00327 2.1e-152 ykuT M mechanosensitive ion channel
GKBPBIME_00328 3.5e-155 XK27_00890 S Domain of unknown function (DUF368)
GKBPBIME_00329 1.6e-33 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
GKBPBIME_00330 2.1e-85 ykuL S CBS domain
GKBPBIME_00331 2.5e-135 gla U Major intrinsic protein
GKBPBIME_00332 2.5e-97 S Phosphoesterase
GKBPBIME_00333 3.8e-276 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GKBPBIME_00334 8.8e-84 yslB S Protein of unknown function (DUF2507)
GKBPBIME_00335 1.5e-244 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GKBPBIME_00336 1.2e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GKBPBIME_00337 2.6e-238 dltB M MBOAT, membrane-bound O-acyltransferase family
GKBPBIME_00338 1.1e-294 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GKBPBIME_00339 6.1e-20 dltX S D-Ala-teichoic acid biosynthesis protein
GKBPBIME_00340 6.6e-53 trxA O Belongs to the thioredoxin family
GKBPBIME_00341 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GKBPBIME_00342 9.6e-92 cvpA S Colicin V production protein
GKBPBIME_00343 5.8e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
GKBPBIME_00344 6.8e-53 yrzB S Belongs to the UPF0473 family
GKBPBIME_00345 1.6e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GKBPBIME_00346 4e-43 yrzL S Belongs to the UPF0297 family
GKBPBIME_00348 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GKBPBIME_00349 7.8e-174
GKBPBIME_00350 4.3e-250 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GKBPBIME_00351 3.7e-179 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GKBPBIME_00352 2.3e-240 ytoI K DRTGG domain
GKBPBIME_00353 1.2e-205 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GKBPBIME_00354 3.3e-291 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GKBPBIME_00355 2.3e-116 sirR K Helix-turn-helix diphteria tox regulatory element
GKBPBIME_00356 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GKBPBIME_00357 1.2e-65 yajC U Preprotein translocase
GKBPBIME_00358 2.3e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GKBPBIME_00359 2.1e-207 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GKBPBIME_00360 3.2e-189 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GKBPBIME_00361 6e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GKBPBIME_00362 1.4e-104 yjbF S SNARE associated Golgi protein
GKBPBIME_00363 2.2e-87 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GKBPBIME_00364 1.6e-221 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
GKBPBIME_00366 3.5e-74 S Protein of unknown function (DUF3290)
GKBPBIME_00367 6.6e-119 yviA S Protein of unknown function (DUF421)
GKBPBIME_00368 2e-144 S Alpha beta hydrolase
GKBPBIME_00369 1.7e-155
GKBPBIME_00370 1.3e-156 dkgB S reductase
GKBPBIME_00371 2.5e-83 nrdI F Belongs to the NrdI family
GKBPBIME_00372 5.2e-178 D Alpha beta
GKBPBIME_00373 3.3e-77 K Transcriptional regulator
GKBPBIME_00374 8.5e-122 gph 3.1.3.18 S haloacid dehalogenase-like hydrolase
GKBPBIME_00375 8.7e-199 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GKBPBIME_00376 2.6e-94 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GKBPBIME_00377 2.6e-45
GKBPBIME_00378 1.9e-180 3.4.11.5 I carboxylic ester hydrolase activity
GKBPBIME_00379 0.0 yfgQ P E1-E2 ATPase
GKBPBIME_00380 1.9e-80 ndk 2.7.4.6 F Belongs to the NDK family
GKBPBIME_00381 4.4e-132 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
GKBPBIME_00382 1.5e-71 pheB 5.4.99.5 S Belongs to the UPF0735 family
GKBPBIME_00383 1e-63
GKBPBIME_00384 1.3e-54
GKBPBIME_00385 1.2e-252 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
GKBPBIME_00387 2e-190 S response to antibiotic
GKBPBIME_00388 1.3e-129 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
GKBPBIME_00389 8.4e-27 yjgN S Bacterial protein of unknown function (DUF898)
GKBPBIME_00391 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GKBPBIME_00392 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GKBPBIME_00393 3.4e-211 camS S sex pheromone
GKBPBIME_00394 3.7e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GKBPBIME_00395 5.1e-265 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GKBPBIME_00396 8e-279 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GKBPBIME_00397 4.4e-194 yegS 2.7.1.107 G Lipid kinase
GKBPBIME_00398 1.3e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GKBPBIME_00399 3.6e-219 yttB EGP Major facilitator Superfamily
GKBPBIME_00400 2e-144 cof S Sucrose-6F-phosphate phosphohydrolase
GKBPBIME_00401 1.5e-163 S Polyphosphate nucleotide phosphotransferase, PPK2 family
GKBPBIME_00402 0.0 pepO 3.4.24.71 O Peptidase family M13
GKBPBIME_00403 5e-265 ydiC1 EGP Major facilitator Superfamily
GKBPBIME_00404 1.1e-78 K Acetyltransferase (GNAT) family
GKBPBIME_00405 1.2e-165 degV S Uncharacterised protein, DegV family COG1307
GKBPBIME_00406 1.9e-119 qmcA O prohibitin homologues
GKBPBIME_00407 1.2e-28
GKBPBIME_00408 9.3e-138 lys M Glycosyl hydrolases family 25
GKBPBIME_00409 2.2e-60 S Protein of unknown function (DUF1093)
GKBPBIME_00410 1.7e-60 S Domain of unknown function (DUF4828)
GKBPBIME_00411 2.5e-175 mocA S Oxidoreductase
GKBPBIME_00412 1.1e-223 yfmL 3.6.4.13 L DEAD DEAH box helicase
GKBPBIME_00413 7.6e-56 chbA 2.7.1.196, 2.7.1.205 G phosphoenolpyruvate-dependent sugar phosphotransferase system
GKBPBIME_00414 7.3e-71 S Domain of unknown function (DUF3284)
GKBPBIME_00416 7.5e-07
GKBPBIME_00417 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GKBPBIME_00418 2.7e-238 pepS E Thermophilic metalloprotease (M29)
GKBPBIME_00419 2.1e-111 K Bacterial regulatory proteins, tetR family
GKBPBIME_00420 2.6e-258 S Uncharacterized protein conserved in bacteria (DUF2252)
GKBPBIME_00421 6e-180 yihY S Belongs to the UPF0761 family
GKBPBIME_00422 7.2e-80 fld C Flavodoxin
GKBPBIME_00423 8.2e-159 map 3.4.11.18 E Methionine Aminopeptidase
GKBPBIME_00424 3.8e-201 M Glycosyltransferase like family 2
GKBPBIME_00426 3.1e-14
GKBPBIME_00427 5.2e-198 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
GKBPBIME_00428 5.7e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GKBPBIME_00431 6.7e-64 gntP EG Gluconate
GKBPBIME_00432 1.9e-305 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
GKBPBIME_00433 1.2e-168 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
GKBPBIME_00434 2.5e-123 gntR K rpiR family
GKBPBIME_00435 1e-164 yvgN C Aldo keto reductase
GKBPBIME_00436 1.8e-141 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
GKBPBIME_00437 3.6e-293 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GKBPBIME_00438 8.6e-68 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GKBPBIME_00439 1.8e-237 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GKBPBIME_00440 3.9e-218 hpk31 2.7.13.3 T Histidine kinase
GKBPBIME_00441 1.9e-121 K response regulator
GKBPBIME_00442 4.7e-120
GKBPBIME_00443 2.5e-275 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GKBPBIME_00444 3e-105 XK27_01040 S Protein of unknown function (DUF1129)
GKBPBIME_00445 1.3e-185 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GKBPBIME_00446 1.8e-29 yyzM S Bacterial protein of unknown function (DUF951)
GKBPBIME_00447 5.2e-156 spo0J K Belongs to the ParB family
GKBPBIME_00448 9.7e-138 soj D Sporulation initiation inhibitor
GKBPBIME_00449 4e-137 noc K Belongs to the ParB family
GKBPBIME_00450 4.1e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GKBPBIME_00451 1.3e-66
GKBPBIME_00452 3e-127 cobQ S glutamine amidotransferase
GKBPBIME_00453 6.5e-108 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GKBPBIME_00454 2.5e-118 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GKBPBIME_00455 3.7e-152 S Protein of unknown function (DUF979)
GKBPBIME_00456 3.3e-113 S Protein of unknown function (DUF969)
GKBPBIME_00458 1.6e-62 asp2 S Asp23 family, cell envelope-related function
GKBPBIME_00459 7.4e-68 asp23 S Asp23 family, cell envelope-related function
GKBPBIME_00460 2.8e-25
GKBPBIME_00461 5.3e-82 S Protein conserved in bacteria
GKBPBIME_00462 3.5e-39 S Transglycosylase associated protein
GKBPBIME_00463 1.4e-71 pdxH S Pyridoxamine 5'-phosphate oxidase
GKBPBIME_00464 1.9e-170 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GKBPBIME_00465 1.1e-26
GKBPBIME_00466 1.2e-36
GKBPBIME_00467 2.4e-83 fld C Flavodoxin
GKBPBIME_00468 2.8e-48
GKBPBIME_00469 6.5e-90
GKBPBIME_00471 1e-55 ywjH S Protein of unknown function (DUF1634)
GKBPBIME_00472 4.6e-125 yxaA S Sulfite exporter TauE/SafE
GKBPBIME_00473 5.6e-218 S TPM domain
GKBPBIME_00474 1.7e-116
GKBPBIME_00475 7.2e-261 nox 1.6.3.4 C NADH oxidase
GKBPBIME_00476 0.0 fnq20 1.13.12.16 S FAD-NAD(P)-binding
GKBPBIME_00477 1.4e-111 gadR K Helix-turn-helix XRE-family like proteins
GKBPBIME_00478 1.9e-225 V ABC transporter transmembrane region
GKBPBIME_00479 1.2e-213 S nuclear-transcribed mRNA catabolic process, no-go decay
GKBPBIME_00480 6.4e-76 S NUDIX domain
GKBPBIME_00481 1.1e-43
GKBPBIME_00482 1.5e-89 V ATPases associated with a variety of cellular activities
GKBPBIME_00483 1.3e-67
GKBPBIME_00484 3e-53
GKBPBIME_00485 4.1e-83
GKBPBIME_00486 1.4e-298 oppA E ABC transporter, substratebinding protein
GKBPBIME_00487 9.2e-231 cinA 3.5.1.42 S Belongs to the CinA family
GKBPBIME_00488 4.7e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GKBPBIME_00489 3.1e-231 rny S Endoribonuclease that initiates mRNA decay
GKBPBIME_00490 2.6e-115 yvyE 3.4.13.9 S YigZ family
GKBPBIME_00491 1.7e-235 comFA L Helicase C-terminal domain protein
GKBPBIME_00492 6.6e-82 comFC S Competence protein
GKBPBIME_00493 2.1e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GKBPBIME_00494 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GKBPBIME_00495 3.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GKBPBIME_00496 5.4e-124 ftsE D ABC transporter
GKBPBIME_00498 3.6e-202 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
GKBPBIME_00499 2.4e-130 K response regulator
GKBPBIME_00500 1.1e-308 phoR 2.7.13.3 T Histidine kinase
GKBPBIME_00501 1.2e-152 pstS P Phosphate
GKBPBIME_00502 3.6e-155 pstC P probably responsible for the translocation of the substrate across the membrane
GKBPBIME_00503 4.8e-157 pstA P Phosphate transport system permease protein PstA
GKBPBIME_00504 4.5e-149 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GKBPBIME_00505 9.3e-141 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GKBPBIME_00506 1e-119 phoU P Plays a role in the regulation of phosphate uptake
GKBPBIME_00507 2.4e-262 yvlB S Putative adhesin
GKBPBIME_00508 1.4e-30
GKBPBIME_00509 7.4e-34 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GKBPBIME_00510 2.1e-174 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GKBPBIME_00511 9.5e-166 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GKBPBIME_00512 6.9e-195 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GKBPBIME_00513 2.4e-178 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GKBPBIME_00514 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GKBPBIME_00515 2.2e-114 T Transcriptional regulatory protein, C terminal
GKBPBIME_00516 1.7e-174 T His Kinase A (phosphoacceptor) domain
GKBPBIME_00517 4.5e-91 V ABC transporter
GKBPBIME_00518 0.0 V FtsX-like permease family
GKBPBIME_00519 6.5e-119 yfbR S HD containing hydrolase-like enzyme
GKBPBIME_00520 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GKBPBIME_00521 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GKBPBIME_00522 8.7e-85 S Short repeat of unknown function (DUF308)
GKBPBIME_00523 9.7e-166 rapZ S Displays ATPase and GTPase activities
GKBPBIME_00524 2.4e-192 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GKBPBIME_00525 8.2e-171 whiA K May be required for sporulation
GKBPBIME_00526 3.2e-80 ohrR K helix_turn_helix multiple antibiotic resistance protein
GKBPBIME_00527 1.9e-101 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GKBPBIME_00533 3.9e-71
GKBPBIME_00534 1.1e-209 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GKBPBIME_00535 3.8e-263 emrY EGP Major facilitator Superfamily
GKBPBIME_00536 4.3e-80 merR K MerR HTH family regulatory protein
GKBPBIME_00537 6.2e-266 lmrB EGP Major facilitator Superfamily
GKBPBIME_00538 5.2e-109 S Domain of unknown function (DUF4811)
GKBPBIME_00539 2.4e-119 3.6.1.27 I Acid phosphatase homologues
GKBPBIME_00540 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GKBPBIME_00541 2.2e-280 ytgP S Polysaccharide biosynthesis protein
GKBPBIME_00542 2.2e-128 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GKBPBIME_00543 4e-33 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
GKBPBIME_00544 4.8e-143 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GKBPBIME_00545 2.8e-93 FNV0100 F NUDIX domain
GKBPBIME_00547 1.5e-288 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
GKBPBIME_00548 9.3e-305 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
GKBPBIME_00549 3.7e-87 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
GKBPBIME_00552 3.9e-234 malY 4.4.1.8 E Aminotransferase, class I
GKBPBIME_00553 2.5e-258 cpdA S Calcineurin-like phosphoesterase
GKBPBIME_00554 1e-38 gcvR T Belongs to the UPF0237 family
GKBPBIME_00555 2.1e-244 XK27_08635 S UPF0210 protein
GKBPBIME_00556 4.3e-213 coiA 3.6.4.12 S Competence protein
GKBPBIME_00557 2.3e-113 yjbH Q Thioredoxin
GKBPBIME_00558 7.5e-106 yjbK S CYTH
GKBPBIME_00559 1.3e-122 yjbM 2.7.6.5 S RelA SpoT domain protein
GKBPBIME_00560 4.6e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GKBPBIME_00561 1.1e-169 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
GKBPBIME_00562 4.1e-203 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GKBPBIME_00563 1.5e-112 cutC P Participates in the control of copper homeostasis
GKBPBIME_00564 2.1e-143 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GKBPBIME_00565 4.6e-199 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GKBPBIME_00566 2.5e-62 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GKBPBIME_00567 3.5e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GKBPBIME_00568 5.7e-191 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GKBPBIME_00569 5.7e-172 corA P CorA-like Mg2+ transporter protein
GKBPBIME_00570 9.6e-155 rrmA 2.1.1.187 H Methyltransferase
GKBPBIME_00571 9.4e-97 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GKBPBIME_00572 8.4e-72 WQ51_03320 S Protein of unknown function (DUF1149)
GKBPBIME_00573 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
GKBPBIME_00574 9.4e-231 ymfF S Peptidase M16 inactive domain protein
GKBPBIME_00575 3.4e-244 ymfH S Peptidase M16
GKBPBIME_00576 2e-129 IQ Enoyl-(Acyl carrier protein) reductase
GKBPBIME_00577 1.3e-109 ymfM S Helix-turn-helix domain
GKBPBIME_00578 1.4e-104 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GKBPBIME_00579 6.3e-221 L Transposase
GKBPBIME_00580 1.1e-18 S Bacteriophage abortive infection AbiH
GKBPBIME_00581 9.4e-12 XK27_02675 K Acetyltransferase (GNAT) domain
GKBPBIME_00583 1.5e-109 1.6.5.2 S Flavodoxin-like fold
GKBPBIME_00584 1e-97 K Bacterial regulatory proteins, tetR family
GKBPBIME_00585 3.2e-144 hutG 3.5.3.8 E N-formylglutamate amidohydrolase
GKBPBIME_00586 3.6e-54 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
GKBPBIME_00587 5.8e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GKBPBIME_00588 5.3e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GKBPBIME_00589 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
GKBPBIME_00590 1.8e-57
GKBPBIME_00591 1.4e-81 6.3.3.2 S ASCH
GKBPBIME_00592 1.8e-23
GKBPBIME_00593 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GKBPBIME_00594 1.9e-193 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GKBPBIME_00595 4.4e-309 dnaK O Heat shock 70 kDa protein
GKBPBIME_00596 3.4e-98 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GKBPBIME_00597 4.2e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GKBPBIME_00598 5.3e-225 hemN H Involved in the biosynthesis of porphyrin-containing compound
GKBPBIME_00599 3.1e-178 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GKBPBIME_00600 4.4e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GKBPBIME_00601 1e-142 terC P Integral membrane protein TerC family
GKBPBIME_00602 4.6e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GKBPBIME_00603 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GKBPBIME_00604 6.5e-45 ylxQ J ribosomal protein
GKBPBIME_00605 1.7e-45 ylxR K Protein of unknown function (DUF448)
GKBPBIME_00606 1.7e-195 nusA K Participates in both transcription termination and antitermination
GKBPBIME_00607 1.7e-84 rimP J Required for maturation of 30S ribosomal subunits
GKBPBIME_00608 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GKBPBIME_00609 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GKBPBIME_00610 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
GKBPBIME_00611 1.2e-138 cdsA 2.7.7.41 S Belongs to the CDS family
GKBPBIME_00612 2.7e-140 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GKBPBIME_00613 1.1e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GKBPBIME_00614 5.9e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GKBPBIME_00615 1.5e-155 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GKBPBIME_00616 1e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
GKBPBIME_00617 5.2e-46 yazA L GIY-YIG catalytic domain protein
GKBPBIME_00618 4.2e-130 yabB 2.1.1.223 L Methyltransferase small domain
GKBPBIME_00619 2.6e-123 plsC 2.3.1.51 I Acyltransferase
GKBPBIME_00620 4e-214 yfnA E Amino Acid
GKBPBIME_00621 6.7e-142 yejC S Protein of unknown function (DUF1003)
GKBPBIME_00622 0.0 mdlB V ABC transporter
GKBPBIME_00623 0.0 mdlA V ABC transporter
GKBPBIME_00624 4.8e-29 yneF S UPF0154 protein
GKBPBIME_00625 4e-37 ynzC S UPF0291 protein
GKBPBIME_00626 2.1e-19
GKBPBIME_00627 2.9e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GKBPBIME_00628 1.1e-144 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GKBPBIME_00629 2.2e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GKBPBIME_00630 2.2e-38 ylqC S Belongs to the UPF0109 family
GKBPBIME_00631 1e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GKBPBIME_00632 6.3e-231 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GKBPBIME_00633 3.8e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GKBPBIME_00635 8.8e-53
GKBPBIME_00636 1.4e-181 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GKBPBIME_00637 0.0 smc D Required for chromosome condensation and partitioning
GKBPBIME_00638 1.7e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GKBPBIME_00639 0.0 oppA1 E ABC transporter substrate-binding protein
GKBPBIME_00640 1.5e-137 oppC EP Binding-protein-dependent transport system inner membrane component
GKBPBIME_00641 9.2e-170 oppB P ABC transporter permease
GKBPBIME_00642 1.4e-178 oppF P Belongs to the ABC transporter superfamily
GKBPBIME_00643 5.7e-194 oppD P Belongs to the ABC transporter superfamily
GKBPBIME_00644 8.9e-37 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GKBPBIME_00645 2.3e-187 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GKBPBIME_00646 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GKBPBIME_00647 9.3e-311 yloV S DAK2 domain fusion protein YloV
GKBPBIME_00648 2.3e-57 asp S Asp23 family, cell envelope-related function
GKBPBIME_00649 2.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GKBPBIME_00650 2.1e-128 thiN 2.7.6.2 H thiamine pyrophosphokinase
GKBPBIME_00651 3e-116 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GKBPBIME_00652 7.6e-174 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GKBPBIME_00653 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
GKBPBIME_00654 9.7e-135 stp 3.1.3.16 T phosphatase
GKBPBIME_00655 8.9e-256 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GKBPBIME_00656 2.2e-176 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GKBPBIME_00657 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GKBPBIME_00658 2.1e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GKBPBIME_00659 1.3e-35 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GKBPBIME_00660 1.9e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
GKBPBIME_00661 1.6e-91 rssA S Patatin-like phospholipase
GKBPBIME_00662 1.9e-49
GKBPBIME_00664 0.0 recN L May be involved in recombinational repair of damaged DNA
GKBPBIME_00665 2e-74 argR K Regulates arginine biosynthesis genes
GKBPBIME_00666 1e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GKBPBIME_00667 4.6e-149 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GKBPBIME_00668 1.6e-32 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GKBPBIME_00669 7.7e-199 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GKBPBIME_00670 4.6e-149 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GKBPBIME_00671 4.7e-67 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GKBPBIME_00672 2.2e-76 yqhY S Asp23 family, cell envelope-related function
GKBPBIME_00673 1.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GKBPBIME_00675 2.7e-202 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GKBPBIME_00676 1.7e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GKBPBIME_00677 5.5e-56 ysxB J Cysteine protease Prp
GKBPBIME_00678 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
GKBPBIME_00679 3.2e-11
GKBPBIME_00680 1e-16
GKBPBIME_00682 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GKBPBIME_00683 5.4e-261 glnA 6.3.1.2 E glutamine synthetase
GKBPBIME_00684 1e-60 glnR K Transcriptional regulator
GKBPBIME_00685 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
GKBPBIME_00686 1.4e-239 ynbB 4.4.1.1 P aluminum resistance
GKBPBIME_00687 2.9e-173 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GKBPBIME_00688 1.5e-25 WQ51_02665 S Protein of unknown function (DUF3042)
GKBPBIME_00689 2.6e-73 yqhL P Rhodanese-like protein
GKBPBIME_00690 5.4e-178 glk 2.7.1.2 G Glucokinase
GKBPBIME_00691 2.4e-40 yqgQ S Bacterial protein of unknown function (DUF910)
GKBPBIME_00692 7.3e-121 gluP 3.4.21.105 S Peptidase, S54 family
GKBPBIME_00693 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
GKBPBIME_00694 0.0 S Bacterial membrane protein YfhO
GKBPBIME_00695 2.1e-54 yneR S Belongs to the HesB IscA family
GKBPBIME_00696 6.9e-116 vraR K helix_turn_helix, Lux Regulon
GKBPBIME_00697 1.4e-179 vraS 2.7.13.3 T Histidine kinase
GKBPBIME_00698 3.2e-119 yvqF S Cell wall-active antibiotics response 4TMS YvqF
GKBPBIME_00699 6.9e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GKBPBIME_00700 4.7e-114 udk 2.7.1.48 F Cytidine monophosphokinase
GKBPBIME_00701 5.2e-204 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GKBPBIME_00702 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GKBPBIME_00703 1.3e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GKBPBIME_00704 6.3e-66 yodB K Transcriptional regulator, HxlR family
GKBPBIME_00705 7.3e-94 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GKBPBIME_00706 5.1e-139 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GKBPBIME_00707 1.9e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GKBPBIME_00708 1.9e-173 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GKBPBIME_00709 1.5e-289 arlS 2.7.13.3 T Histidine kinase
GKBPBIME_00710 7.9e-123 K response regulator
GKBPBIME_00711 3.7e-268 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GKBPBIME_00712 8e-38 yhcX S Psort location Cytoplasmic, score
GKBPBIME_00713 4.5e-97 yceD S Uncharacterized ACR, COG1399
GKBPBIME_00714 1.2e-208 ylbM S Belongs to the UPF0348 family
GKBPBIME_00715 3.2e-138 yccK Q ubiE/COQ5 methyltransferase family
GKBPBIME_00716 1.9e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GKBPBIME_00717 5.6e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
GKBPBIME_00718 5.7e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GKBPBIME_00719 3.8e-48 yhbY J RNA-binding protein
GKBPBIME_00720 2.1e-205 yqeH S Ribosome biogenesis GTPase YqeH
GKBPBIME_00721 2.9e-96 yqeG S HAD phosphatase, family IIIA
GKBPBIME_00722 1.6e-171 ykcA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GKBPBIME_00723 1.2e-190 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GKBPBIME_00724 3.6e-122 mhqD S Dienelactone hydrolase family
GKBPBIME_00725 1.3e-179 3.5.1.10 C Alcohol dehydrogenase GroES-like domain
GKBPBIME_00726 1.2e-97 yvdD 3.2.2.10 S Belongs to the LOG family
GKBPBIME_00727 8.7e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GKBPBIME_00728 9e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GKBPBIME_00729 1.5e-77 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GKBPBIME_00730 8.2e-128 S SseB protein N-terminal domain
GKBPBIME_00731 1.6e-53
GKBPBIME_00732 2e-103 yrgI 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
GKBPBIME_00733 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GKBPBIME_00734 1.2e-171 dnaI L Primosomal protein DnaI
GKBPBIME_00735 1.5e-250 dnaB L replication initiation and membrane attachment
GKBPBIME_00736 7.3e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GKBPBIME_00737 2e-98 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GKBPBIME_00738 7.9e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GKBPBIME_00739 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GKBPBIME_00740 4.2e-119 ybhL S Inhibitor of apoptosis-promoting Bax1
GKBPBIME_00741 2e-252 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GKBPBIME_00742 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
GKBPBIME_00743 7.4e-115 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GKBPBIME_00744 1.5e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GKBPBIME_00746 1.8e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GKBPBIME_00747 1e-147 ytmP 2.7.1.89 M Choline/ethanolamine kinase
GKBPBIME_00749 1.7e-213 ecsB U ABC transporter
GKBPBIME_00750 3.1e-133 ecsA V ABC transporter, ATP-binding protein
GKBPBIME_00751 1e-75 hit FG histidine triad
GKBPBIME_00752 2.7e-61 yhaH S YtxH-like protein
GKBPBIME_00753 8.1e-160 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GKBPBIME_00754 4e-181 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
GKBPBIME_00755 3.9e-54 yheA S Control of competence regulator ComK, YlbF/YmcA
GKBPBIME_00756 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GKBPBIME_00757 1.8e-153 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GKBPBIME_00758 5.3e-75 argR K Regulates arginine biosynthesis genes
GKBPBIME_00759 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GKBPBIME_00761 1.2e-67
GKBPBIME_00762 2.1e-22
GKBPBIME_00763 1.3e-176 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
GKBPBIME_00764 0.0 glpQ 3.1.4.46 C phosphodiesterase
GKBPBIME_00765 1.1e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GKBPBIME_00766 3.2e-68 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GKBPBIME_00767 3.3e-135 yhfI S Metallo-beta-lactamase superfamily
GKBPBIME_00768 1.1e-92 traP 1.14.99.57, 6.2.1.3 S heme oxygenase (decyclizing) activity
GKBPBIME_00769 0.0 V ABC transporter (permease)
GKBPBIME_00770 9.7e-138 bceA V ABC transporter
GKBPBIME_00771 5.9e-123 K response regulator
GKBPBIME_00772 5.9e-205 T PhoQ Sensor
GKBPBIME_00773 1.6e-108 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GKBPBIME_00774 0.0 copB 3.6.3.4 P P-type ATPase
GKBPBIME_00775 5.1e-75 copR K Copper transport repressor CopY TcrY
GKBPBIME_00776 3.4e-233 purD 6.3.4.13 F Belongs to the GARS family
GKBPBIME_00777 1.1e-286 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GKBPBIME_00778 7.8e-100 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GKBPBIME_00779 1.3e-182 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GKBPBIME_00780 2.9e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GKBPBIME_00781 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GKBPBIME_00782 1.1e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GKBPBIME_00783 1.9e-40 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GKBPBIME_00784 5.8e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GKBPBIME_00785 2.5e-211 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GKBPBIME_00786 3.2e-78 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GKBPBIME_00787 4.7e-103 thiT S Thiamine transporter protein (Thia_YuaJ)
GKBPBIME_00788 1.1e-256 iolT EGP Major facilitator Superfamily
GKBPBIME_00789 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GKBPBIME_00790 2.7e-39 ptsH G phosphocarrier protein HPR
GKBPBIME_00791 2e-28
GKBPBIME_00792 0.0 clpE O Belongs to the ClpA ClpB family
GKBPBIME_00793 1.4e-44 XK27_09445 S Domain of unknown function (DUF1827)
GKBPBIME_00795 6.5e-306 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GKBPBIME_00796 6.7e-243 hlyX S Transporter associated domain
GKBPBIME_00797 2.7e-195 yueF S AI-2E family transporter
GKBPBIME_00798 4e-72 S Acetyltransferase (GNAT) domain
GKBPBIME_00799 1.2e-94
GKBPBIME_00800 6.4e-104 ygaC J Belongs to the UPF0374 family
GKBPBIME_00801 8.7e-142 recX 2.4.1.337 GT4 S Regulatory protein RecX
GKBPBIME_00802 2.3e-292 frvR K transcriptional antiterminator
GKBPBIME_00803 2.9e-63
GKBPBIME_00804 9.8e-250 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GKBPBIME_00805 8.2e-79 F Nucleoside 2-deoxyribosyltransferase
GKBPBIME_00806 1.8e-133 K UTRA
GKBPBIME_00807 3.5e-290 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GKBPBIME_00808 9.4e-253 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GKBPBIME_00809 3e-84
GKBPBIME_00810 2e-49 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GKBPBIME_00811 6.9e-50 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GKBPBIME_00812 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GKBPBIME_00813 9.9e-219 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
GKBPBIME_00814 1.6e-201 mvaA 1.1.1.34, 1.1.1.88 C Belongs to the HMG-CoA reductase family
GKBPBIME_00815 4.2e-209 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
GKBPBIME_00816 1.6e-48
GKBPBIME_00817 2.6e-160 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
GKBPBIME_00818 5.7e-103 V Restriction endonuclease
GKBPBIME_00819 5.8e-157 5.1.3.3 G converts alpha-aldose to the beta-anomer
GKBPBIME_00820 5.2e-212 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GKBPBIME_00821 1e-102 S ECF transporter, substrate-specific component
GKBPBIME_00823 2.1e-79 yodP 2.3.1.264 K Acetyltransferase GNAT Family
GKBPBIME_00824 8.1e-84 ydcK S Belongs to the SprT family
GKBPBIME_00825 1.9e-130 XK27_08845 S ABC transporter, ATP-binding protein
GKBPBIME_00826 4.2e-140 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
GKBPBIME_00827 3.3e-154 XK27_08835 S ABC transporter
GKBPBIME_00829 2.6e-71
GKBPBIME_00830 0.0 pacL 3.6.3.8 P P-type ATPase
GKBPBIME_00831 9.2e-217 V Beta-lactamase
GKBPBIME_00832 1.3e-151 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GKBPBIME_00833 1e-196 V Beta-lactamase
GKBPBIME_00834 7.2e-275 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GKBPBIME_00835 5e-125 gntR1 K UbiC transcription regulator-associated domain protein
GKBPBIME_00836 2.6e-219 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GKBPBIME_00837 1.1e-136 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GKBPBIME_00838 0.0 yuxL 3.4.19.1 E Prolyl oligopeptidase family
GKBPBIME_00841 2.4e-158 yjjH S Calcineurin-like phosphoesterase
GKBPBIME_00842 4.6e-266 dtpT U amino acid peptide transporter
GKBPBIME_00843 0.0 macB_3 V ABC transporter, ATP-binding protein
GKBPBIME_00844 3.1e-65
GKBPBIME_00845 3.4e-76 S function, without similarity to other proteins
GKBPBIME_00846 1.2e-263 G MFS/sugar transport protein
GKBPBIME_00847 3.2e-230 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
GKBPBIME_00848 1.6e-57
GKBPBIME_00849 0.0 pckG 4.1.1.32, 4.1.1.49 C Phosphoenolpyruvate carboxykinase
GKBPBIME_00850 1.4e-17 S Virus attachment protein p12 family
GKBPBIME_00851 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
GKBPBIME_00852 4e-27
GKBPBIME_00853 1.8e-62 L IS66 Orf2 like protein
GKBPBIME_00854 2.7e-293 L Transposase IS66 family
GKBPBIME_00855 0.0 yknV V ABC transporter
GKBPBIME_00856 1.3e-222 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GKBPBIME_00857 1.9e-231 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GKBPBIME_00858 3.1e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
GKBPBIME_00859 7.8e-48 MA20_27270 S mazG nucleotide pyrophosphohydrolase
GKBPBIME_00860 1.3e-20
GKBPBIME_00861 1.5e-259 arpJ P ABC transporter permease
GKBPBIME_00862 1.8e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GKBPBIME_00863 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GKBPBIME_00864 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
GKBPBIME_00865 6.7e-170 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GKBPBIME_00866 6.6e-131 fruR K DeoR C terminal sensor domain
GKBPBIME_00867 3.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GKBPBIME_00868 0.0 oatA I Acyltransferase
GKBPBIME_00869 8.6e-184 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GKBPBIME_00870 1e-142 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
GKBPBIME_00871 4.1e-48 yrvD S Lipopolysaccharide assembly protein A domain
GKBPBIME_00872 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GKBPBIME_00873 3.5e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GKBPBIME_00874 2.8e-94 M1-874 K Domain of unknown function (DUF1836)
GKBPBIME_00875 4.7e-301 cpdB 3.1.3.6, 3.1.4.16 F 5'-nucleotidase, C-terminal domain
GKBPBIME_00876 2.4e-135
GKBPBIME_00877 2.5e-18 S Protein of unknown function (DUF2929)
GKBPBIME_00878 0.0 dnaE 2.7.7.7 L DNA polymerase
GKBPBIME_00879 7e-178 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GKBPBIME_00880 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GKBPBIME_00881 1.5e-72 yeaL S Protein of unknown function (DUF441)
GKBPBIME_00882 4.9e-162 cvfB S S1 domain
GKBPBIME_00883 4.8e-165 xerD D recombinase XerD
GKBPBIME_00884 2e-67 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GKBPBIME_00885 1.2e-124 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GKBPBIME_00886 5.5e-107 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GKBPBIME_00887 6.7e-136 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GKBPBIME_00888 2.6e-95 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GKBPBIME_00889 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GKBPBIME_00890 6.8e-69 2.7.1.191 G PTS system fructose IIA component
GKBPBIME_00891 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GKBPBIME_00892 2.4e-153 G PTS system mannose/fructose/sorbose family IID component
GKBPBIME_00893 2.8e-127 G PTS system sorbose-specific iic component
GKBPBIME_00894 3e-84 2.7.1.191 G PTS system sorbose subfamily IIB component
GKBPBIME_00895 3.1e-184 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
GKBPBIME_00896 1.9e-43 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GKBPBIME_00897 1.7e-151 S hydrolase
GKBPBIME_00898 1e-262 npr 1.11.1.1 C NADH oxidase
GKBPBIME_00899 5.3e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
GKBPBIME_00900 1.5e-184 hrtB V ABC transporter permease
GKBPBIME_00901 1.6e-85 ygfC K Bacterial regulatory proteins, tetR family
GKBPBIME_00902 3.8e-113 3.2.1.17 M hydrolase, family 25
GKBPBIME_00903 8.1e-12 S YvrJ protein family
GKBPBIME_00905 1.4e-237 kgtP EGP Sugar (and other) transporter
GKBPBIME_00906 1.6e-115 P Binding-protein-dependent transport system inner membrane component
GKBPBIME_00907 2.9e-114 P Binding-protein-dependent transport system inner membrane component
GKBPBIME_00908 5.1e-159 ET Bacterial periplasmic substrate-binding proteins
GKBPBIME_00909 1.4e-128 E ABC transporter
GKBPBIME_00910 4.6e-191 odh 1.5.1.28 C NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
GKBPBIME_00911 2.9e-218 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
GKBPBIME_00912 0.0 mtlF 2.7.1.197 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GKBPBIME_00913 6.7e-96 hxlB 4.1.2.43, 5.3.1.27 M SIS domain
GKBPBIME_00914 7.7e-112 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
GKBPBIME_00915 1.3e-134 fruR K DeoR C terminal sensor domain
GKBPBIME_00916 1.4e-121 S Haloacid dehalogenase-like hydrolase
GKBPBIME_00918 1e-271 G Glycosyl hydrolases family 32
GKBPBIME_00919 1.2e-55
GKBPBIME_00920 1.9e-147 levD G PTS system mannose/fructose/sorbose family IID component
GKBPBIME_00921 1.6e-152 M PTS system sorbose-specific iic component
GKBPBIME_00922 4.8e-90 2.7.1.191 G PTS system sorbose subfamily IIB component
GKBPBIME_00923 5.3e-72 levA G PTS system fructose IIA component
GKBPBIME_00924 0.0 K Sigma-54 interaction domain
GKBPBIME_00926 8.8e-27
GKBPBIME_00927 7.5e-311 md2 V ABC transporter
GKBPBIME_00928 1.6e-302 yfiB V ABC transporter transmembrane region
GKBPBIME_00930 0.0 pip V domain protein
GKBPBIME_00931 2.6e-155 metQ_4 P Belongs to the nlpA lipoprotein family
GKBPBIME_00932 1.3e-198 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GKBPBIME_00933 7.9e-84
GKBPBIME_00934 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
GKBPBIME_00935 1.7e-15
GKBPBIME_00936 1.5e-100 K Bacterial regulatory proteins, tetR family
GKBPBIME_00937 7.3e-59 dhaM 2.7.1.121 S PTS system fructose IIA component
GKBPBIME_00938 5e-102 dhaL 2.7.1.121 S Dak2
GKBPBIME_00939 1.4e-189 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
GKBPBIME_00940 1.1e-74 ohr O OsmC-like protein
GKBPBIME_00942 7.1e-53
GKBPBIME_00943 8.5e-265 L Exonuclease
GKBPBIME_00944 3.6e-48 K Helix-turn-helix domain
GKBPBIME_00945 4.5e-203 yceJ EGP Major facilitator Superfamily
GKBPBIME_00946 2.4e-107 K Transcriptional
GKBPBIME_00947 9.6e-106 tag 3.2.2.20 L glycosylase
GKBPBIME_00948 1e-167 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GKBPBIME_00949 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GKBPBIME_00950 1.3e-195 V Beta-lactamase
GKBPBIME_00951 1.9e-144 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
GKBPBIME_00952 1.3e-19 H Protein of unknown function (DUF1698)
GKBPBIME_00953 1.2e-94 H Protein of unknown function (DUF1698)
GKBPBIME_00954 5.7e-143 puuD S peptidase C26
GKBPBIME_00955 1.2e-255 6.3.1.2 E Glutamine synthetase, catalytic domain
GKBPBIME_00956 2.1e-221 S Amidohydrolase
GKBPBIME_00957 5.3e-248 E Amino acid permease
GKBPBIME_00958 6.5e-75 K helix_turn_helix, mercury resistance
GKBPBIME_00959 1.5e-163 morA2 S reductase
GKBPBIME_00960 4.5e-199 qor 1.1.1.1, 1.6.5.5 C Zinc-binding dehydrogenase
GKBPBIME_00961 8.4e-57 hxlR K HxlR-like helix-turn-helix
GKBPBIME_00962 7.2e-49 tnp2PF3 L Transposase DDE domain
GKBPBIME_00963 1.2e-120 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
GKBPBIME_00964 1.7e-145 S Alpha/beta hydrolase of unknown function (DUF915)
GKBPBIME_00965 7e-164 cylA V ABC transporter
GKBPBIME_00966 1.2e-147 cylB V ABC-2 type transporter
GKBPBIME_00967 1.7e-73 K LytTr DNA-binding domain
GKBPBIME_00968 9.6e-44 S Protein of unknown function (DUF3021)
GKBPBIME_00969 0.0 yjcE P Sodium proton antiporter
GKBPBIME_00970 2.1e-241 S Protein of unknown function (DUF3800)
GKBPBIME_00971 4.8e-249 yifK E Amino acid permease
GKBPBIME_00972 1.7e-156 yeaE S Aldo/keto reductase family
GKBPBIME_00973 5.1e-113 ylbE GM NAD(P)H-binding
GKBPBIME_00974 1.9e-278 lsa S ABC transporter
GKBPBIME_00975 1.6e-76 O OsmC-like protein
GKBPBIME_00976 3e-67
GKBPBIME_00977 4.6e-31 K 'Cold-shock' DNA-binding domain
GKBPBIME_00978 4.6e-252 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GKBPBIME_00979 3e-173 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
GKBPBIME_00980 5.6e-267 yfnA E Amino Acid
GKBPBIME_00981 3.6e-217 sstT U Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
GKBPBIME_00982 0.0 treB 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GKBPBIME_00983 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
GKBPBIME_00984 7.7e-129 treR K UTRA
GKBPBIME_00985 6e-222 oxlT P Major Facilitator Superfamily
GKBPBIME_00986 0.0 V ABC transporter
GKBPBIME_00987 0.0 XK27_09600 V ABC transporter, ATP-binding protein
GKBPBIME_00988 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GKBPBIME_00989 1.6e-165 metF 1.5.1.20 C Methylenetetrahydrofolate reductase
GKBPBIME_00990 7.1e-59 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GKBPBIME_00991 6e-108 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
GKBPBIME_00992 2.6e-163 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GKBPBIME_00994 1.4e-121
GKBPBIME_00995 4.1e-259 wcaJ M Bacterial sugar transferase
GKBPBIME_00996 4.6e-174 cps2D 5.1.3.2 M RmlD substrate binding domain
GKBPBIME_00997 7.4e-110 glnP P ABC transporter permease
GKBPBIME_00998 4.6e-109 gluC P ABC transporter permease
GKBPBIME_00999 3.8e-148 glnH ET ABC transporter substrate-binding protein
GKBPBIME_01000 7.4e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GKBPBIME_01001 1.1e-173
GKBPBIME_01003 6.1e-84 zur P Belongs to the Fur family
GKBPBIME_01004 6.3e-09
GKBPBIME_01005 1e-110 gmk2 2.7.4.8 F Guanylate kinase
GKBPBIME_01006 1.9e-68 GnaT 2.5.1.16 K Acetyltransferase (GNAT) domain
GKBPBIME_01007 1.6e-126 spl M NlpC/P60 family
GKBPBIME_01008 2.6e-244 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GKBPBIME_01009 3.3e-172 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GKBPBIME_01010 1e-54 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
GKBPBIME_01011 1.3e-173 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GKBPBIME_01012 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
GKBPBIME_01013 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GKBPBIME_01014 8.9e-286 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
GKBPBIME_01015 3.6e-200 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
GKBPBIME_01016 3.6e-197 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GKBPBIME_01017 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GKBPBIME_01018 1.4e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
GKBPBIME_01019 1.6e-99 ylcC 3.4.22.70 M Sortase family
GKBPBIME_01020 1.8e-145 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GKBPBIME_01021 0.0 fbp 3.1.3.11 G phosphatase activity
GKBPBIME_01022 1.6e-151 S AAA-like domain
GKBPBIME_01023 9.8e-49 S SIR2-like domain
GKBPBIME_01024 6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GKBPBIME_01025 3e-178 coaA 2.7.1.33 F Pantothenic acid kinase
GKBPBIME_01026 3.9e-12
GKBPBIME_01027 8.7e-23
GKBPBIME_01028 1.4e-275 pipD E Dipeptidase
GKBPBIME_01029 8.5e-84 ykhA 3.1.2.20 I Thioesterase superfamily
GKBPBIME_01030 0.0 helD 3.6.4.12 L DNA helicase
GKBPBIME_01031 7.1e-21
GKBPBIME_01032 0.0 yjbQ P TrkA C-terminal domain protein
GKBPBIME_01033 1.1e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
GKBPBIME_01034 8e-79 yjhE S Phage tail protein
GKBPBIME_01035 4.1e-240 mntH P H( )-stimulated, divalent metal cation uptake system
GKBPBIME_01036 4.4e-188 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
GKBPBIME_01037 2.3e-127 pgm3 G Phosphoglycerate mutase family
GKBPBIME_01038 0.0 V FtsX-like permease family
GKBPBIME_01039 2.6e-135 cysA V ABC transporter, ATP-binding protein
GKBPBIME_01040 0.0 E amino acid
GKBPBIME_01041 3.4e-163 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
GKBPBIME_01042 2.4e-237 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GKBPBIME_01043 9e-152 nodB3 G Polysaccharide deacetylase
GKBPBIME_01044 2.9e-274 S Glucosyl transferase GtrII
GKBPBIME_01045 8e-223
GKBPBIME_01046 1.3e-93
GKBPBIME_01047 3.4e-173 3.1.4.46 M Peptidase_C39 like family
GKBPBIME_01048 4.5e-117 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GKBPBIME_01049 1.3e-44 XK27_02675 K Acetyltransferase (GNAT) domain
GKBPBIME_01050 1.2e-48
GKBPBIME_01051 8.2e-19
GKBPBIME_01052 3.8e-66 S Protein of unknown function (DUF1093)
GKBPBIME_01053 5.3e-37
GKBPBIME_01054 6.2e-111 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
GKBPBIME_01055 2.9e-87 XK27_03960 S Protein of unknown function (DUF3013)
GKBPBIME_01056 1.1e-172 prmA J Ribosomal protein L11 methyltransferase
GKBPBIME_01057 5.9e-132 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GKBPBIME_01058 1.3e-43
GKBPBIME_01059 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GKBPBIME_01060 1.2e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GKBPBIME_01061 2.6e-117 3.1.3.18 J HAD-hyrolase-like
GKBPBIME_01062 5.9e-244 lytH 3.5.1.28, 6.1.1.12 M N-acetylmuramoyl-L-alanine amidase
GKBPBIME_01063 2.5e-73 FG adenosine 5'-monophosphoramidase activity
GKBPBIME_01064 6.9e-156 V ABC transporter
GKBPBIME_01065 5.8e-280
GKBPBIME_01066 8.4e-131 K Helix-turn-helix
GKBPBIME_01067 2.1e-76
GKBPBIME_01068 4.1e-167 1.6.5.5 C nadph quinone reductase
GKBPBIME_01069 1.7e-35 XK27_04345 3.6.1.1 C Inorganic pyrophosphatase
GKBPBIME_01070 2.6e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
GKBPBIME_01071 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GKBPBIME_01072 2.6e-82 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GKBPBIME_01073 7.4e-169 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GKBPBIME_01074 1.3e-162 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GKBPBIME_01075 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GKBPBIME_01076 2.9e-21 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GKBPBIME_01077 6.1e-68 yqeY S YqeY-like protein
GKBPBIME_01079 2.9e-179 phoH T phosphate starvation-inducible protein PhoH
GKBPBIME_01080 2e-82 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GKBPBIME_01081 3.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
GKBPBIME_01082 8e-64 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
GKBPBIME_01083 9.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GKBPBIME_01084 3.3e-141 recO L Involved in DNA repair and RecF pathway recombination
GKBPBIME_01085 2.3e-53
GKBPBIME_01086 3.2e-55
GKBPBIME_01087 2.4e-12
GKBPBIME_01089 9.3e-139 gntP EG Gluconate
GKBPBIME_01090 2.4e-248 S O-antigen ligase like membrane protein
GKBPBIME_01091 1.2e-151 S Glycosyl transferase family 2
GKBPBIME_01092 8e-115 welB S Glycosyltransferase like family 2
GKBPBIME_01093 8.8e-159 S Glycosyltransferase like family 2
GKBPBIME_01094 3.9e-147 M Glycosyltransferase sugar-binding region containing DXD motif
GKBPBIME_01095 0.0 M Glycosyl hydrolases family 25
GKBPBIME_01096 5.4e-259 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
GKBPBIME_01097 1.4e-161 S Glycosyltransferase like family 2
GKBPBIME_01098 1.1e-197 S Protein conserved in bacteria
GKBPBIME_01099 7.6e-58
GKBPBIME_01100 2.2e-128 fhuC 3.6.3.35 P ABC transporter
GKBPBIME_01101 3.3e-133 znuB U ABC 3 transport family
GKBPBIME_01102 4.2e-166 T Calcineurin-like phosphoesterase superfamily domain
GKBPBIME_01103 7.1e-161 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
GKBPBIME_01104 0.0 pepF E oligoendopeptidase F
GKBPBIME_01105 7.4e-200 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GKBPBIME_01106 2.9e-249 brnQ U Component of the transport system for branched-chain amino acids
GKBPBIME_01107 7e-71 T Sh3 type 3 domain protein
GKBPBIME_01108 2.4e-133 glcR K DeoR C terminal sensor domain
GKBPBIME_01109 2e-146 M Glycosyltransferase like family 2
GKBPBIME_01110 3.3e-135 XK27_06755 S Protein of unknown function (DUF975)
GKBPBIME_01111 1.4e-40
GKBPBIME_01112 2.4e-107 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GKBPBIME_01113 6e-174 draG O ADP-ribosylglycohydrolase
GKBPBIME_01114 1.6e-293 S ABC transporter
GKBPBIME_01115 1.6e-134 Q Methyltransferase domain
GKBPBIME_01116 7.6e-177 sitA P Belongs to the bacterial solute-binding protein 9 family
GKBPBIME_01117 3.6e-144 mtsB U ABC 3 transport family
GKBPBIME_01118 2.2e-131 mntB 3.6.3.35 P AAA domain, putative AbiEii toxin, Type IV TA system
GKBPBIME_01119 1.1e-275 aldA 1.2.1.21, 1.2.1.22 C Belongs to the aldehyde dehydrogenase family
GKBPBIME_01120 3e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GKBPBIME_01121 5.9e-166 znuA P Belongs to the bacterial solute-binding protein 9 family
GKBPBIME_01122 1.6e-117 GM NmrA-like family
GKBPBIME_01123 8.3e-111 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
GKBPBIME_01124 2.6e-70
GKBPBIME_01125 2.4e-253 M domain protein
GKBPBIME_01126 5.4e-164 znuA P Belongs to the bacterial solute-binding protein 9 family
GKBPBIME_01127 6.1e-20
GKBPBIME_01128 3e-60
GKBPBIME_01131 1.9e-51 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GKBPBIME_01132 8.7e-69 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GKBPBIME_01134 2.3e-157 phnD P Phosphonate ABC transporter
GKBPBIME_01135 7.5e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GKBPBIME_01136 1.7e-134 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
GKBPBIME_01137 1.3e-145 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
GKBPBIME_01138 1.8e-173 ssuA P NMT1-like family
GKBPBIME_01139 6.8e-292 6.2.1.3, 6.2.1.8 IQ AMP-binding enzyme C-terminal domain
GKBPBIME_01140 1.1e-167 yfiQ I Acyltransferase family
GKBPBIME_01141 1.2e-115 ssuB P ATPases associated with a variety of cellular activities
GKBPBIME_01142 1.2e-61 ssuC U Binding-protein-dependent transport system inner membrane component
GKBPBIME_01143 4.9e-66 ssuC U Binding-protein-dependent transport system inner membrane component
GKBPBIME_01144 1.2e-121 S ABC-2 family transporter protein
GKBPBIME_01145 5.4e-53 trxC O Belongs to the thioredoxin family
GKBPBIME_01146 6.3e-137 thrE S Putative threonine/serine exporter
GKBPBIME_01147 1.4e-75 S Threonine/Serine exporter, ThrE
GKBPBIME_01148 1.4e-35 livJ E Receptor family ligand binding region
GKBPBIME_01149 7.3e-141 livJ E Receptor family ligand binding region
GKBPBIME_01150 6.9e-148 livH U Branched-chain amino acid transport system / permease component
GKBPBIME_01151 4.6e-121 livM E Branched-chain amino acid transport system / permease component
GKBPBIME_01152 8.1e-140 livG E Branched-chain amino acid ATP-binding cassette transporter
GKBPBIME_01153 1.2e-11 livF E ABC transporter
GKBPBIME_01154 2.3e-69 livF E ABC transporter
GKBPBIME_01155 3.9e-67 ydeA S DJ-1/PfpI family
GKBPBIME_01156 1.1e-22 mutT 3.6.1.55 F GDP-mannose mannosyl hydrolase activity
GKBPBIME_01157 1.2e-39 yvdC S MazG nucleotide pyrophosphohydrolase domain
GKBPBIME_01158 3.1e-167 S Alpha/beta hydrolase of unknown function (DUF915)
GKBPBIME_01159 4.2e-234 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GKBPBIME_01160 7.6e-118 XK27_12570 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GKBPBIME_01161 8.2e-117 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
GKBPBIME_01162 6.8e-231 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
GKBPBIME_01163 3.4e-129 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
GKBPBIME_01164 3.6e-152 M NlpC P60 family protein
GKBPBIME_01167 1.4e-259 nox 1.6.3.4 C NADH oxidase
GKBPBIME_01168 2.9e-89 sepS16B
GKBPBIME_01169 8.1e-120
GKBPBIME_01170 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
GKBPBIME_01171 6e-241 G Bacterial extracellular solute-binding protein
GKBPBIME_01172 6e-86
GKBPBIME_01173 0.0 strH 3.2.1.52 GH20 G Gram-positive signal peptide protein, YSIRK family
GKBPBIME_01174 4.3e-194 manA 5.3.1.8 G mannose-6-phosphate isomerase
GKBPBIME_01175 9.3e-261 pepC 3.4.22.40 E Peptidase C1-like family
GKBPBIME_01176 3.6e-257 pepC 3.4.22.40 E aminopeptidase
GKBPBIME_01177 9.5e-70 S Protein of unknown function (DUF805)
GKBPBIME_01178 2.9e-50 HA62_12640 S GCN5-related N-acetyl-transferase
GKBPBIME_01179 9.6e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTPase
GKBPBIME_01180 6.5e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GKBPBIME_01181 1.2e-202 yacL S domain protein
GKBPBIME_01182 1.7e-216 inlJ M MucBP domain
GKBPBIME_01183 8e-61 K helix_turn_helix gluconate operon transcriptional repressor
GKBPBIME_01184 6.9e-176 S Membrane
GKBPBIME_01185 6.9e-113 yhfC S Putative membrane peptidase family (DUF2324)
GKBPBIME_01186 9.1e-142 K SIS domain
GKBPBIME_01187 2.3e-76 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
GKBPBIME_01188 4.3e-183 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
GKBPBIME_01189 6.2e-274 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GKBPBIME_01191 2.3e-107
GKBPBIME_01192 1.6e-260 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
GKBPBIME_01193 1.4e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GKBPBIME_01194 8.5e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GKBPBIME_01195 1.4e-139 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GKBPBIME_01196 2.4e-98 yacP S YacP-like NYN domain
GKBPBIME_01198 5.7e-189 XK27_00915 C Luciferase-like monooxygenase
GKBPBIME_01199 7e-93 1.5.1.40 S Rossmann-like domain
GKBPBIME_01202 5.5e-178 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GKBPBIME_01203 1.2e-98 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
GKBPBIME_01204 1.2e-79 ynhH S NusG domain II
GKBPBIME_01205 0.0 ndh 1.6.99.3 C NADH dehydrogenase
GKBPBIME_01206 1.2e-137 cad S FMN_bind
GKBPBIME_01207 4.4e-197 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GKBPBIME_01208 1.1e-167 menA 2.5.1.74 M UbiA prenyltransferase family
GKBPBIME_01209 2e-155 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GKBPBIME_01210 5.5e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GKBPBIME_01211 1.6e-21 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GKBPBIME_01212 3.4e-100 nusG K Participates in transcription elongation, termination and antitermination
GKBPBIME_01213 3.8e-159 S Alpha/beta hydrolase of unknown function (DUF915)
GKBPBIME_01214 1.4e-77 F Nucleoside 2-deoxyribosyltransferase
GKBPBIME_01215 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
GKBPBIME_01216 2e-62 S Domain of unknown function (DUF4430)
GKBPBIME_01217 3.2e-93 S ECF transporter, substrate-specific component
GKBPBIME_01218 1.5e-92 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S Cobalamin adenosyltransferase
GKBPBIME_01219 1.1e-65 frataxin S Domain of unknown function (DU1801)
GKBPBIME_01220 7.7e-269 nylA 3.5.1.4 J Belongs to the amidase family
GKBPBIME_01221 0.0 mgtA 3.6.3.2, 3.6.3.6 P COG0474 Cation transport ATPase
GKBPBIME_01222 8.2e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GKBPBIME_01223 1.3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GKBPBIME_01224 2.5e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
GKBPBIME_01225 1.9e-217 yceI G Sugar (and other) transporter
GKBPBIME_01226 3.1e-66
GKBPBIME_01227 1.6e-154 K acetyltransferase
GKBPBIME_01228 5e-221 mdtG EGP Major facilitator Superfamily
GKBPBIME_01229 6.5e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GKBPBIME_01230 1.1e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GKBPBIME_01231 1.3e-104 L Belongs to the 'phage' integrase family
GKBPBIME_01232 7.8e-50 S Domain of unknown function (DUF4352)
GKBPBIME_01233 4.8e-73
GKBPBIME_01234 1.1e-74 E Zn peptidase
GKBPBIME_01235 4.2e-53 3.4.21.88 K Helix-turn-helix domain
GKBPBIME_01236 1.6e-07 K Helix-turn-helix
GKBPBIME_01240 1.3e-15
GKBPBIME_01243 7.5e-155 recT L RecT family
GKBPBIME_01244 8.5e-148 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
GKBPBIME_01245 3.1e-52 L Domain of unknown function (DUF4373)
GKBPBIME_01246 3.5e-127 dnaC 3.4.21.53 L IstB-like ATP binding protein
GKBPBIME_01248 1.6e-36
GKBPBIME_01249 3e-65 S magnesium ion binding
GKBPBIME_01250 9.8e-37 S DNA N-6-adenine-methyltransferase (Dam)
GKBPBIME_01251 6.9e-14
GKBPBIME_01256 5.4e-22
GKBPBIME_01260 2.9e-78
GKBPBIME_01261 7.9e-09 S Super-infection exclusion protein B
GKBPBIME_01263 2.2e-218 S GcrA cell cycle regulator
GKBPBIME_01266 5.1e-64 ps333 L Terminase small subunit
GKBPBIME_01267 6.5e-179 S Phage terminase large subunit
GKBPBIME_01268 4.2e-177 S Phage portal protein, SPP1 Gp6-like
GKBPBIME_01269 2.6e-60 S Phage Mu protein F like protein
GKBPBIME_01271 1.9e-18 S Domain of unknown function (DUF4355)
GKBPBIME_01272 3.3e-108
GKBPBIME_01273 7.9e-144
GKBPBIME_01274 1.7e-55 S Phage gp6-like head-tail connector protein
GKBPBIME_01275 3.8e-49
GKBPBIME_01276 3.7e-55 S Bacteriophage HK97-gp10, putative tail-component
GKBPBIME_01277 7.8e-70 S Protein of unknown function (DUF3168)
GKBPBIME_01278 1.6e-95 S Phage tail tube protein
GKBPBIME_01279 8.1e-49 S Phage tail assembly chaperone protein, TAC
GKBPBIME_01280 3.1e-54
GKBPBIME_01281 2e-279 S phage tail tape measure protein
GKBPBIME_01282 2.4e-286 S Phage tail protein
GKBPBIME_01283 0.0 S cellulase activity
GKBPBIME_01284 1.2e-26
GKBPBIME_01286 1.1e-46
GKBPBIME_01287 1.9e-42 hol S Bacteriophage holin
GKBPBIME_01288 6.9e-85 M Bacteriophage peptidoglycan hydrolase
GKBPBIME_01289 1.6e-155 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GKBPBIME_01290 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
GKBPBIME_01291 2.2e-176 ccpB 5.1.1.1 K lacI family
GKBPBIME_01292 1.8e-45
GKBPBIME_01293 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GKBPBIME_01294 5.3e-107 rsmC 2.1.1.172 J Methyltransferase
GKBPBIME_01295 5.6e-50
GKBPBIME_01296 2.5e-89 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GKBPBIME_01297 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GKBPBIME_01298 8.4e-32 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GKBPBIME_01299 4.8e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GKBPBIME_01300 5.8e-34 S Protein of unknown function (DUF2508)
GKBPBIME_01301 5.1e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GKBPBIME_01302 4.6e-52 yaaQ S Cyclic-di-AMP receptor
GKBPBIME_01303 5.8e-172 holB 2.7.7.7 L DNA polymerase III
GKBPBIME_01304 2.2e-57 yabA L Involved in initiation control of chromosome replication
GKBPBIME_01305 2.2e-143 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GKBPBIME_01306 8.7e-144 fat 3.1.2.21 I Acyl-ACP thioesterase
GKBPBIME_01307 2e-180 ansA 3.5.1.1 EJ Asparaginase
GKBPBIME_01308 3.3e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
GKBPBIME_01309 4.6e-74
GKBPBIME_01310 5.3e-130 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
GKBPBIME_01311 3.6e-99 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
GKBPBIME_01312 4.2e-189 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GKBPBIME_01313 3.9e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GKBPBIME_01314 0.0 uup S ABC transporter, ATP-binding protein
GKBPBIME_01315 7.2e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GKBPBIME_01316 2.7e-61 ytrA K helix_turn_helix gluconate operon transcriptional repressor
GKBPBIME_01317 2.6e-158 ytrB V ABC transporter
GKBPBIME_01318 1.8e-184
GKBPBIME_01319 2.4e-195 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GKBPBIME_01320 1.9e-110 S CAAX protease self-immunity
GKBPBIME_01321 6.7e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GKBPBIME_01322 1e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GKBPBIME_01323 2.4e-56 S Domain of unknown function (DUF1827)
GKBPBIME_01324 0.0 ydaO E amino acid
GKBPBIME_01325 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GKBPBIME_01326 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GKBPBIME_01327 1.1e-98 maf D nucleoside-triphosphate diphosphatase activity
GKBPBIME_01328 2.8e-61 S Domain of unknown function (DUF4811)
GKBPBIME_01329 1e-257 lmrB EGP Major facilitator Superfamily
GKBPBIME_01330 5.3e-259 yhdP S Transporter associated domain
GKBPBIME_01331 1.2e-132 S Uncharacterized protein conserved in bacteria (DUF2263)
GKBPBIME_01332 6.2e-119 yfeJ 6.3.5.2 F glutamine amidotransferase
GKBPBIME_01333 3.4e-90 T Sh3 type 3 domain protein
GKBPBIME_01334 5.8e-100 Q methyltransferase
GKBPBIME_01336 4.9e-114 GM NmrA-like family
GKBPBIME_01337 8.1e-196 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GKBPBIME_01338 3.6e-82 C Flavodoxin
GKBPBIME_01339 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GKBPBIME_01341 2.9e-16
GKBPBIME_01342 2.2e-14 ytgB S Transglycosylase associated protein
GKBPBIME_01344 8.3e-176 L Transposase and inactivated derivatives, IS30 family
GKBPBIME_01345 2.5e-200 gldA 1.1.1.1, 1.1.1.6 C dehydrogenase
GKBPBIME_01346 1.1e-225 amd 3.5.1.47 E Peptidase family M20/M25/M40
GKBPBIME_01347 3.8e-79 S Threonine/Serine exporter, ThrE
GKBPBIME_01348 2.2e-134 thrE S Putative threonine/serine exporter
GKBPBIME_01350 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GKBPBIME_01351 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GKBPBIME_01353 8.2e-129 jag S R3H domain protein
GKBPBIME_01354 2.6e-136 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GKBPBIME_01355 6.1e-59 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GKBPBIME_01356 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GKBPBIME_01357 1.2e-252 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GKBPBIME_01358 5.2e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GKBPBIME_01359 1.7e-31 yaaA S S4 domain protein YaaA
GKBPBIME_01360 1.2e-202 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GKBPBIME_01361 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GKBPBIME_01362 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GKBPBIME_01363 1.5e-124 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
GKBPBIME_01364 8.5e-75 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GKBPBIME_01365 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
GKBPBIME_01366 3.9e-62 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GKBPBIME_01367 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GKBPBIME_01368 4.7e-282 cydA 1.10.3.14 C Cytochrome bd terminal oxidase subunit I
GKBPBIME_01369 3.9e-179 cydB 1.10.3.14 C Cytochrome bd terminal oxidase subunit II
GKBPBIME_01370 2.4e-13
GKBPBIME_01371 4.9e-43 O Belongs to the peptidase S8 family
GKBPBIME_01372 1.5e-143 O Belongs to the peptidase S8 family
GKBPBIME_01373 0.0 O Belongs to the peptidase S8 family
GKBPBIME_01374 0.0 pepN 3.4.11.2 E aminopeptidase
GKBPBIME_01375 7.1e-275 ycaM E amino acid
GKBPBIME_01376 5.3e-76 S Protein of unknown function (DUF1440)
GKBPBIME_01377 4.8e-165 K Transcriptional regulator, LysR family
GKBPBIME_01378 3e-159 G Xylose isomerase-like TIM barrel
GKBPBIME_01379 1.7e-140 IQ Enoyl-(Acyl carrier protein) reductase
GKBPBIME_01380 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GKBPBIME_01381 2.9e-213 ydiN EGP Major Facilitator Superfamily
GKBPBIME_01382 2.1e-168 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GKBPBIME_01383 4.4e-157 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
GKBPBIME_01384 4.6e-174 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GKBPBIME_01385 5.8e-28
GKBPBIME_01387 6.7e-223 L Belongs to the 'phage' integrase family
GKBPBIME_01388 2.2e-09
GKBPBIME_01390 5.9e-149 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GKBPBIME_01391 1.3e-88 S ECF-type riboflavin transporter, S component
GKBPBIME_01392 2.9e-145 CcmA5 V ABC transporter
GKBPBIME_01393 0.0
GKBPBIME_01394 4.6e-177 yicL EG EamA-like transporter family
GKBPBIME_01395 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
GKBPBIME_01396 5.1e-101 N WxL domain surface cell wall-binding
GKBPBIME_01397 1.8e-57
GKBPBIME_01398 1.1e-111 S WxL domain surface cell wall-binding
GKBPBIME_01399 4.4e-198 XK27_00720 S Leucine-rich repeat (LRR) protein
GKBPBIME_01400 1.5e-38
GKBPBIME_01401 4e-171 S Cell surface protein
GKBPBIME_01402 2.2e-117 S WxL domain surface cell wall-binding
GKBPBIME_01403 4.8e-252 brnQ U Component of the transport system for branched-chain amino acids
GKBPBIME_01404 7.2e-31
GKBPBIME_01405 5.3e-122 tcyB E ABC transporter
GKBPBIME_01406 3.9e-145 tcyA ET Belongs to the bacterial solute-binding protein 3 family
GKBPBIME_01407 5.1e-212 metC 4.4.1.8 E cystathionine
GKBPBIME_01408 7.3e-183 CP_0155 3.5.1.28 M Glycosyl hydrolases family 25
GKBPBIME_01409 1.2e-152 licT K CAT RNA binding domain
GKBPBIME_01410 2e-289 cydC V ABC transporter transmembrane region
GKBPBIME_01411 6.5e-87 cydD CO ABC transporter transmembrane region
GKBPBIME_01412 1.5e-217 cydD CO ABC transporter transmembrane region
GKBPBIME_01413 1.2e-73 S NusG domain II
GKBPBIME_01414 1e-156 M Peptidoglycan-binding domain 1 protein
GKBPBIME_01415 4.3e-141
GKBPBIME_01416 1.5e-214 ywhK S Membrane
GKBPBIME_01417 7.1e-62 S Protein of unknown function (DUF1093)
GKBPBIME_01418 7.1e-50 yvlA
GKBPBIME_01419 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GKBPBIME_01420 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GKBPBIME_01421 1.3e-182 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
GKBPBIME_01422 6.8e-278 cydA 1.10.3.14 C ubiquinol oxidase
GKBPBIME_01424 3.1e-237 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
GKBPBIME_01425 1.4e-189 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GKBPBIME_01426 8.6e-40
GKBPBIME_01427 1.4e-86
GKBPBIME_01428 8e-24
GKBPBIME_01429 5e-165 yicL EG EamA-like transporter family
GKBPBIME_01430 3.3e-112 tag 3.2.2.20 L glycosylase
GKBPBIME_01431 5e-78 usp5 T universal stress protein
GKBPBIME_01432 3.2e-96
GKBPBIME_01433 5.5e-288 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GKBPBIME_01434 4e-57 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GKBPBIME_01435 4.5e-208 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GKBPBIME_01436 2.6e-49 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GKBPBIME_01437 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GKT Mga helix-turn-helix domain
GKBPBIME_01438 7e-104 L Resolvase, N terminal domain
GKBPBIME_01439 0.0 yvcC M Cna protein B-type domain
GKBPBIME_01440 8.8e-125 M domain protein
GKBPBIME_01441 2.8e-185 M LPXTG cell wall anchor motif
GKBPBIME_01442 9.5e-200 3.4.22.70 M Sortase family
GKBPBIME_01443 1.6e-115 XK27_12140 V ATPases associated with a variety of cellular activities
GKBPBIME_01444 8.2e-296 S Psort location CytoplasmicMembrane, score
GKBPBIME_01445 2.7e-126 K Transcriptional regulatory protein, C terminal
GKBPBIME_01446 1.3e-194 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GKBPBIME_01447 7.7e-139 V ATPases associated with a variety of cellular activities
GKBPBIME_01448 2.4e-209
GKBPBIME_01449 1.5e-91
GKBPBIME_01450 2.4e-164 O Belongs to the peptidase S8 family
GKBPBIME_01451 3e-170 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GKBPBIME_01452 6.6e-181 D Alpha beta
GKBPBIME_01453 2.4e-186 lipA I Carboxylesterase family
GKBPBIME_01454 5.6e-206 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
GKBPBIME_01455 1.1e-77 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GKBPBIME_01456 0.0 mtlR K Mga helix-turn-helix domain
GKBPBIME_01457 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
GKBPBIME_01458 7.2e-130 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GKBPBIME_01459 3.3e-149 S haloacid dehalogenase-like hydrolase
GKBPBIME_01460 3.1e-43
GKBPBIME_01461 5.2e-10
GKBPBIME_01462 1.8e-151 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GKBPBIME_01463 7.1e-124 V ABC transporter
GKBPBIME_01464 7.5e-206 bacI V MacB-like periplasmic core domain
GKBPBIME_01465 0.0 M Leucine rich repeats (6 copies)
GKBPBIME_01466 8.6e-28 M Leucine rich repeats (6 copies)
GKBPBIME_01467 1.5e-69 3.4.22.70 M Sortase family
GKBPBIME_01468 2.9e-229 ywhK S Membrane
GKBPBIME_01469 3.1e-42
GKBPBIME_01471 1.1e-147 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GKBPBIME_01472 1.2e-201 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GKBPBIME_01473 1.7e-224 pimH EGP Major facilitator Superfamily
GKBPBIME_01474 1.3e-38
GKBPBIME_01475 9.6e-32
GKBPBIME_01476 7e-08
GKBPBIME_01477 1e-09 yhjA K CsbD-like
GKBPBIME_01478 4.6e-205 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GKBPBIME_01479 7.2e-46
GKBPBIME_01480 6e-205 ltrA S Bacterial low temperature requirement A protein (LtrA)
GKBPBIME_01481 7.7e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GKBPBIME_01482 2.6e-92 ccpN K Domain in cystathionine beta-synthase and other proteins.
GKBPBIME_01483 0.0 ppdK 2.7.9.1 G Belongs to the PEP-utilizing enzyme family
GKBPBIME_01484 6.8e-116 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
GKBPBIME_01485 1.5e-98 dps P Belongs to the Dps family
GKBPBIME_01486 5.6e-33 copZ P Heavy-metal-associated domain
GKBPBIME_01487 0.0 3.6.3.3, 3.6.3.5 P P-type ATPase
GKBPBIME_01488 6.7e-23 ypbD S CAAX protease self-immunity
GKBPBIME_01489 7.2e-215 opuCA 2.7.7.7 E ABC transporter, ATP-binding protein
GKBPBIME_01490 1e-105 opuCB E ABC transporter permease
GKBPBIME_01491 3.3e-172 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GKBPBIME_01492 3.3e-110 opuCD P Binding-protein-dependent transport system inner membrane component
GKBPBIME_01494 7.4e-109 K Tetracycline repressor, C-terminal all-alpha domain
GKBPBIME_01495 0.0 ydgH S MMPL family
GKBPBIME_01496 1.6e-49 K TRANSCRIPTIONal
GKBPBIME_01497 3.1e-179 EGP Major facilitator Superfamily
GKBPBIME_01498 7.7e-46 EGP Major facilitator Superfamily
GKBPBIME_01499 1.6e-152 V ABC-type multidrug transport system, ATPase and permease components
GKBPBIME_01503 1.5e-180 S Aldo keto reductase
GKBPBIME_01504 2.2e-118 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GKBPBIME_01505 1.9e-217 yqiG C Oxidoreductase
GKBPBIME_01506 1.1e-253 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GKBPBIME_01507 1.5e-135
GKBPBIME_01508 4.5e-20
GKBPBIME_01509 6.5e-261 mntH P H( )-stimulated, divalent metal cation uptake system
GKBPBIME_01510 0.0 pacL P P-type ATPase
GKBPBIME_01511 7.5e-56
GKBPBIME_01512 1.7e-238 EGP Major Facilitator Superfamily
GKBPBIME_01513 0.0 mco Q Multicopper oxidase
GKBPBIME_01514 3.6e-25
GKBPBIME_01515 6.4e-111 2.5.1.105 P Cation efflux family
GKBPBIME_01516 2.1e-52 czrA K Transcriptional regulator, ArsR family
GKBPBIME_01517 1.2e-112 L PFAM Integrase, catalytic core
GKBPBIME_01518 1.3e-48
GKBPBIME_01519 7.4e-57 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
GKBPBIME_01520 1.5e-16
GKBPBIME_01521 6.7e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GKBPBIME_01522 2e-166 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GKBPBIME_01523 2.8e-221 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GKBPBIME_01524 2.1e-70 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GKBPBIME_01525 1.2e-255 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GKBPBIME_01526 1.5e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
GKBPBIME_01527 7.8e-188 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GKBPBIME_01528 3.7e-196 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GKBPBIME_01529 2.5e-62
GKBPBIME_01530 4.5e-73 3.6.1.55 L NUDIX domain
GKBPBIME_01531 3.4e-147 EG EamA-like transporter family
GKBPBIME_01532 7e-178 V ABC transporter transmembrane region
GKBPBIME_01533 1.7e-32 S Phospholipase A2
GKBPBIME_01534 2.7e-44 fer C 4Fe-4S single cluster domain of Ferredoxin I
GKBPBIME_01535 5.3e-181 ypbB 5.1.3.1 S Helix-turn-helix domain
GKBPBIME_01536 3.2e-264 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
GKBPBIME_01537 6.1e-66 M Lysin motif
GKBPBIME_01538 2e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GKBPBIME_01539 2.1e-225 rpsA 1.17.7.4 J Ribosomal protein S1
GKBPBIME_01540 1e-243 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GKBPBIME_01541 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GKBPBIME_01542 2.3e-237 S Tetratricopeptide repeat protein
GKBPBIME_01543 2.6e-147 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GKBPBIME_01544 3.4e-222 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GKBPBIME_01545 1.3e-84
GKBPBIME_01546 0.0 yfmR S ABC transporter, ATP-binding protein
GKBPBIME_01547 2.1e-190 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GKBPBIME_01548 2.2e-90 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GKBPBIME_01549 2.1e-114 hly S protein, hemolysin III
GKBPBIME_01550 1.5e-145 DegV S EDD domain protein, DegV family
GKBPBIME_01551 4.5e-152 ypmR E GDSL-like Lipase/Acylhydrolase
GKBPBIME_01552 1.2e-112 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
GKBPBIME_01553 3.5e-91 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GKBPBIME_01554 1.1e-39 yozE S Belongs to the UPF0346 family
GKBPBIME_01555 9.3e-240 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
GKBPBIME_01556 4.5e-49 K Helix-turn-helix domain
GKBPBIME_01557 1.9e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GKBPBIME_01558 1.1e-138 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GKBPBIME_01559 1.9e-144 dprA LU DNA protecting protein DprA
GKBPBIME_01560 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GKBPBIME_01561 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GKBPBIME_01562 2.1e-168 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GKBPBIME_01563 7.2e-92 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GKBPBIME_01564 1.2e-258 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GKBPBIME_01565 1.8e-172 lacX 5.1.3.3 G Aldose 1-epimerase
GKBPBIME_01566 1.7e-108 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GKBPBIME_01567 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GKBPBIME_01568 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GKBPBIME_01569 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GKBPBIME_01570 5.6e-171 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GKBPBIME_01571 3.4e-180 K LysR substrate binding domain
GKBPBIME_01572 1.8e-170 ppaC 3.6.1.1 C inorganic pyrophosphatase
GKBPBIME_01573 1.1e-209 xerS L Belongs to the 'phage' integrase family
GKBPBIME_01574 8.1e-39
GKBPBIME_01575 0.0 ysaB V FtsX-like permease family
GKBPBIME_01576 6.3e-137 XK27_05695 V ABC transporter, ATP-binding protein
GKBPBIME_01577 2.3e-173 T PhoQ Sensor
GKBPBIME_01578 1.4e-122 T Transcriptional regulatory protein, C terminal
GKBPBIME_01579 6.8e-190 EGP Transmembrane secretion effector
GKBPBIME_01580 5.3e-47 msi198 K Acetyltransferase (GNAT) domain
GKBPBIME_01581 2.4e-62 K Acetyltransferase (GNAT) domain
GKBPBIME_01582 3.7e-111 nfnB 1.5.1.34 C Nitroreductase family
GKBPBIME_01583 1e-201 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GKBPBIME_01584 1.6e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
GKBPBIME_01585 5.6e-58 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GKBPBIME_01586 2.3e-131 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GKBPBIME_01587 2.8e-123 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GKBPBIME_01588 2e-112 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GKBPBIME_01589 7e-104 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
GKBPBIME_01590 2.8e-230 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GKBPBIME_01591 1.9e-110 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
GKBPBIME_01592 1.4e-217 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
GKBPBIME_01593 2e-205 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GKBPBIME_01594 4.5e-100 3.6.1.13 L Belongs to the Nudix hydrolase family
GKBPBIME_01595 5.9e-160 degV S EDD domain protein, DegV family
GKBPBIME_01596 0.0 FbpA K Fibronectin-binding protein
GKBPBIME_01597 1.5e-49 S MazG-like family
GKBPBIME_01598 3.4e-195 pfoS S Phosphotransferase system, EIIC
GKBPBIME_01599 2.4e-178 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GKBPBIME_01600 1.9e-205 bfmBB 2.3.1.168, 2.3.1.61 C 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
GKBPBIME_01601 3.7e-182 bfmBAB 1.2.4.1, 1.2.4.4 C Transketolase, pyrimidine binding domain
GKBPBIME_01602 6.6e-187 bfmBAA 1.2.4.4 C Dehydrogenase E1 component
GKBPBIME_01603 1.4e-259 lpdA 1.8.1.4 C 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
GKBPBIME_01604 2.4e-201 buk 2.7.2.7 C Acetokinase family
GKBPBIME_01605 5.1e-148 pta 2.3.1.19, 2.3.1.8 C Phosphate acetyl/butaryl transferase
GKBPBIME_01606 8.1e-114 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GKBPBIME_01607 1.4e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GKBPBIME_01608 6.9e-156 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GKBPBIME_01609 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GKBPBIME_01610 1.5e-208 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GKBPBIME_01611 2.8e-235 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GKBPBIME_01612 1.6e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GKBPBIME_01613 5.9e-236 pyrP F Permease
GKBPBIME_01614 1.7e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GKBPBIME_01615 5e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GKBPBIME_01616 2.1e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GKBPBIME_01617 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
GKBPBIME_01618 1.3e-45 S Family of unknown function (DUF5322)
GKBPBIME_01619 6.5e-69 rnhA 3.1.26.4 L Ribonuclease HI
GKBPBIME_01620 1.9e-109 XK27_02070 S Nitroreductase family
GKBPBIME_01621 2.6e-280 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GKBPBIME_01622 1.4e-48
GKBPBIME_01623 9.3e-275 S Mga helix-turn-helix domain
GKBPBIME_01624 2e-38 nrdH O Glutaredoxin
GKBPBIME_01625 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GKBPBIME_01626 2.4e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GKBPBIME_01627 7.1e-161 K Transcriptional regulator
GKBPBIME_01628 0.0 pepO 3.4.24.71 O Peptidase family M13
GKBPBIME_01629 9.6e-194 lplA 6.3.1.20 H Lipoate-protein ligase
GKBPBIME_01630 1.9e-33
GKBPBIME_01631 1e-173 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GKBPBIME_01632 8.2e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GKBPBIME_01633 2.3e-66 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GKBPBIME_01634 1.3e-107 ypsA S Belongs to the UPF0398 family
GKBPBIME_01635 5.1e-121 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GKBPBIME_01636 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
GKBPBIME_01637 4.4e-85 comEB 3.5.4.12 F ComE operon protein 2
GKBPBIME_01638 3e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GKBPBIME_01639 6.7e-113 dnaD L DnaD domain protein
GKBPBIME_01640 3.2e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GKBPBIME_01641 2.2e-218 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
GKBPBIME_01642 7.1e-86 ypmB S Protein conserved in bacteria
GKBPBIME_01643 1.4e-11 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GKBPBIME_01644 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GKBPBIME_01645 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GKBPBIME_01646 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GKBPBIME_01647 1.4e-167 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
GKBPBIME_01648 1.3e-179 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
GKBPBIME_01649 1.1e-192 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GKBPBIME_01650 2.6e-263 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
GKBPBIME_01651 9.4e-175
GKBPBIME_01652 1.1e-141
GKBPBIME_01653 8.2e-60 yitW S Iron-sulfur cluster assembly protein
GKBPBIME_01654 3.5e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
GKBPBIME_01655 6e-151 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GKBPBIME_01656 3e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
GKBPBIME_01657 3.4e-188 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GKBPBIME_01658 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GKBPBIME_01659 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GKBPBIME_01660 2e-171 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GKBPBIME_01661 4.2e-89 sip L Phage integrase family
GKBPBIME_01662 1e-90 sip L Phage integrase family
GKBPBIME_01664 2.6e-52 ybjQ S Belongs to the UPF0145 family
GKBPBIME_01665 4.8e-160 3.5.1.10 C nadph quinone reductase
GKBPBIME_01666 2.8e-246 amt P ammonium transporter
GKBPBIME_01667 2.4e-178 yfeX P Peroxidase
GKBPBIME_01668 2e-118 yhiD S MgtC family
GKBPBIME_01669 2.1e-114 F DNA RNA non-specific endonuclease
GKBPBIME_01670 0.0 ybiT S ABC transporter, ATP-binding protein
GKBPBIME_01671 0.0 mutS L ATPase domain of DNA mismatch repair MUTS family
GKBPBIME_01672 1e-110 ung2 3.2.2.27 L Uracil-DNA glycosylase
GKBPBIME_01673 2.6e-129 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GKBPBIME_01674 6.7e-302 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
GKBPBIME_01675 2.1e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GKBPBIME_01676 5.2e-144 epsG 2.4.1.293 GT2 M Glycosyltransferase like family 2
GKBPBIME_01677 1.4e-156 lacT K PRD domain
GKBPBIME_01678 0.0 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
GKBPBIME_01679 8e-287 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
GKBPBIME_01680 2.3e-51 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
GKBPBIME_01682 0.0 sca1 G Belongs to the glycosyl hydrolase 31 family
GKBPBIME_01683 9.9e-146 3.5.2.6 V Beta-lactamase enzyme family
GKBPBIME_01684 8e-191 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
GKBPBIME_01685 7.4e-194 blaA6 V Beta-lactamase
GKBPBIME_01686 1.6e-155 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GKBPBIME_01687 8.9e-162 ybbH_2 K Helix-turn-helix domain, rpiR family
GKBPBIME_01688 3.1e-81 2.7.1.191 G PTS system sorbose subfamily IIB component
GKBPBIME_01689 8.3e-151 G PTS system mannose/fructose/sorbose family IID component
GKBPBIME_01690 2e-128 G PTS system sorbose-specific iic component
GKBPBIME_01691 1.5e-200 S endonuclease exonuclease phosphatase family protein
GKBPBIME_01692 1.7e-173 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GKBPBIME_01693 3.1e-54
GKBPBIME_01694 3.4e-242 mntH P H( )-stimulated, divalent metal cation uptake system
GKBPBIME_01695 1.2e-112 K Bacterial regulatory proteins, tetR family
GKBPBIME_01696 9.1e-164 corA P CorA-like Mg2+ transporter protein
GKBPBIME_01697 2.6e-101 S Protein of unknown function (DUF1211)
GKBPBIME_01698 6.1e-124 S membrane transporter protein
GKBPBIME_01699 3e-48
GKBPBIME_01700 5.9e-154 supH G Sucrose-6F-phosphate phosphohydrolase
GKBPBIME_01701 5.4e-98 K transcriptional regulator
GKBPBIME_01702 2.8e-128 macB V ABC transporter, ATP-binding protein
GKBPBIME_01703 0.0 ylbB V ABC transporter permease
GKBPBIME_01704 4.7e-110 usp 3.5.1.28 CBM50 D CHAP domain
GKBPBIME_01707 1.1e-104 S Protein of unknown function (DUF1211)
GKBPBIME_01710 4e-80 perR P Belongs to the Fur family
GKBPBIME_01711 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GKBPBIME_01712 1.9e-43 ykuJ S Protein of unknown function (DUF1797)
GKBPBIME_01713 7.7e-219 patA 2.6.1.1 E Aminotransferase
GKBPBIME_01715 1.9e-165 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GKBPBIME_01716 1.2e-196 cpoA GT4 M Glycosyltransferase, group 1 family protein
GKBPBIME_01717 1.2e-230 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
GKBPBIME_01719 3.8e-283 ybeC E amino acid
GKBPBIME_01720 2.1e-94 sigH K DNA-templated transcription, initiation
GKBPBIME_01745 1.1e-178 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
GKBPBIME_01746 5.8e-147 S Sulfite exporter TauE/SafE
GKBPBIME_01747 2.9e-156 K Sugar-specific transcriptional regulator TrmB
GKBPBIME_01748 1.3e-114 6.3.4.4 S Zeta toxin
GKBPBIME_01749 7.5e-163 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GKBPBIME_01750 3.6e-70
GKBPBIME_01751 9.3e-210 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GKBPBIME_01752 5.8e-49 ptxB 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
GKBPBIME_01753 1.2e-198 GKT transcriptional antiterminator
GKBPBIME_01755 5.8e-267 frdC 1.3.5.4 C HI0933-like protein
GKBPBIME_01756 4.4e-52
GKBPBIME_01757 1.3e-61
GKBPBIME_01758 1.2e-272 bglP 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GKBPBIME_01759 1.4e-291 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GKBPBIME_01760 1.5e-95 yxaF K Bacterial regulatory proteins, tetR family
GKBPBIME_01761 4.7e-247 lmrB EGP Major facilitator Superfamily
GKBPBIME_01762 1.1e-258 gor 1.8.1.7 C Glutathione reductase
GKBPBIME_01763 1.5e-280 pipD E Dipeptidase
GKBPBIME_01764 4e-62 S Coenzyme PQQ synthesis protein D (PqqD)
GKBPBIME_01765 1.4e-294 S OPT oligopeptide transporter protein
GKBPBIME_01766 2e-186 tdcB 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GKBPBIME_01767 5.8e-200 ald 1.4.1.1 C Belongs to the AlaDH PNT family
GKBPBIME_01768 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GKBPBIME_01769 7.9e-223 mesE M Transport protein ComB
GKBPBIME_01770 1.4e-59
GKBPBIME_01772 1.5e-250 yjjP S Putative threonine/serine exporter
GKBPBIME_01773 2.8e-45 spiA K TRANSCRIPTIONal
GKBPBIME_01774 3.6e-45 S Enterocin A Immunity
GKBPBIME_01775 5.4e-46 S Enterocin A Immunity
GKBPBIME_01776 3.8e-137
GKBPBIME_01777 6.6e-65
GKBPBIME_01778 2.2e-54 K Transcriptional regulator PadR-like family
GKBPBIME_01779 8.8e-113 K Helix-turn-helix XRE-family like proteins
GKBPBIME_01780 1e-206 MA20_36090 S Protein of unknown function (DUF2974)
GKBPBIME_01781 4e-231 N Uncharacterized conserved protein (DUF2075)
GKBPBIME_01783 7.7e-79
GKBPBIME_01786 1.5e-132
GKBPBIME_01787 2.1e-70
GKBPBIME_01789 9.3e-155 dnaC L IstB-like ATP binding protein
GKBPBIME_01790 2.5e-74 L Helix-turn-helix domain
GKBPBIME_01791 6e-51 L Helix-turn-helix domain
GKBPBIME_01797 7.8e-44 S Domain of unknown function (DUF1883)
GKBPBIME_01799 1.1e-138 S ORF6N domain
GKBPBIME_01800 7.2e-155 ps305 S Protein of unknown function (Hypoth_ymh)
GKBPBIME_01803 7.5e-61 ps115 K Helix-turn-helix XRE-family like proteins
GKBPBIME_01804 6e-20 E Zn peptidase
GKBPBIME_01805 7.8e-134
GKBPBIME_01808 8.9e-147 IQ reductase
GKBPBIME_01809 1e-111 I ABC-2 family transporter protein
GKBPBIME_01810 1.1e-161 CcmA V ABC transporter
GKBPBIME_01811 3.6e-64 K helix_turn_helix gluconate operon transcriptional repressor
GKBPBIME_01812 8.9e-221 ysdA CP ABC-2 family transporter protein
GKBPBIME_01813 3.7e-165 natA S abc transporter atp-binding protein
GKBPBIME_01814 2.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GKBPBIME_01815 5.1e-176 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GKBPBIME_01816 2.8e-160 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GKBPBIME_01817 1.3e-204 S Calcineurin-like phosphoesterase
GKBPBIME_01819 1.3e-117 mprF 2.3.2.3 M lysyltransferase activity
GKBPBIME_01820 2.3e-98 2.3.1.128 J Acetyltransferase (GNAT) domain
GKBPBIME_01821 2e-97
GKBPBIME_01822 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
GKBPBIME_01823 9e-130 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
GKBPBIME_01825 1.3e-263 lysP E amino acid
GKBPBIME_01826 5.9e-296 frvR K Mga helix-turn-helix domain
GKBPBIME_01827 4.7e-304 frvR K Mga helix-turn-helix domain
GKBPBIME_01828 1.5e-223 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GKBPBIME_01829 1e-115 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GKBPBIME_01830 4.6e-134 epsB M biosynthesis protein
GKBPBIME_01831 2.8e-131 E lipolytic protein G-D-S-L family
GKBPBIME_01832 1.4e-81 ccl S QueT transporter
GKBPBIME_01833 1.3e-125 IQ Enoyl-(Acyl carrier protein) reductase
GKBPBIME_01834 3.7e-37 XK27_01315 S Protein of unknown function (DUF2829)
GKBPBIME_01835 7.5e-47 K sequence-specific DNA binding
GKBPBIME_01836 1.7e-116 gpm5 3.1.3.3, 5.4.2.11 G Phosphoglycerate mutase family
GKBPBIME_01837 1.3e-179 oppF P Belongs to the ABC transporter superfamily
GKBPBIME_01838 1.1e-197 oppD P Belongs to the ABC transporter superfamily
GKBPBIME_01839 2.5e-178 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
GKBPBIME_01840 8e-163 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
GKBPBIME_01841 5.9e-302 oppA E ABC transporter, substratebinding protein
GKBPBIME_01842 9.9e-253 EGP Major facilitator Superfamily
GKBPBIME_01843 1.3e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GKBPBIME_01844 7.3e-132 yrjD S LUD domain
GKBPBIME_01845 1.7e-287 lutB C 4Fe-4S dicluster domain
GKBPBIME_01846 1.2e-148 lutA C Cysteine-rich domain
GKBPBIME_01847 4.5e-84
GKBPBIME_01848 5.1e-51 chbA 2.7.1.196, 2.7.1.205 G Phosphotransferase system cellobiose-specific component IIA
GKBPBIME_01849 7.2e-211 S Bacterial protein of unknown function (DUF871)
GKBPBIME_01850 4.3e-68 S Domain of unknown function (DUF3284)
GKBPBIME_01851 4.8e-07
GKBPBIME_01852 6.6e-265 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GKBPBIME_01854 0.0 rafA 3.2.1.22 G alpha-galactosidase
GKBPBIME_01855 7.7e-132 S Belongs to the UPF0246 family
GKBPBIME_01856 3.2e-130 XK27_05520 S Uncharacterized protein conserved in bacteria (DUF2087)
GKBPBIME_01857 0.0 VPA1266 3.1.11.5 L Helix-hairpin-helix containing domain
GKBPBIME_01858 1.4e-80
GKBPBIME_01859 2.4e-59 S WxL domain surface cell wall-binding
GKBPBIME_01860 3e-145 frlD 2.7.1.218 G pfkB family carbohydrate kinase
GKBPBIME_01861 4.3e-104 apc3 3.5.2.9 EQ Hydantoinase/oxoprolinase N-terminal region
GKBPBIME_01862 3.2e-139
GKBPBIME_01863 0.0 3.4.21.53 O Putative ATP-dependent Lon protease
GKBPBIME_01864 0.0 S PglZ domain
GKBPBIME_01865 4.5e-281 2.1.1.72 V Eco57I restriction-modification methylase
GKBPBIME_01866 2.2e-175 L Belongs to the 'phage' integrase family
GKBPBIME_01867 0.0 2.1.1.72 V Eco57I restriction-modification methylase
GKBPBIME_01868 0.0 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
GKBPBIME_01869 5.9e-95 S Domain of unknown function (DUF1788)
GKBPBIME_01870 7.2e-72 S Putative inner membrane protein (DUF1819)
GKBPBIME_01871 2.4e-212 ykiI
GKBPBIME_01872 0.0 scrA 2.7.1.211 G phosphotransferase system
GKBPBIME_01873 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
GKBPBIME_01874 3.2e-181 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
GKBPBIME_01875 6.3e-303 scrB 3.2.1.26 GH32 G invertase
GKBPBIME_01876 7.1e-164 azoB GM NmrA-like family
GKBPBIME_01877 8.5e-234 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GKBPBIME_01878 2.2e-142 accA 2.1.3.15, 6.4.1.2 I alpha subunit
GKBPBIME_01879 2e-149 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GKBPBIME_01880 9.1e-256 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
GKBPBIME_01881 8.7e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
GKBPBIME_01882 5.1e-62 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GKBPBIME_01883 1.2e-222 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GKBPBIME_01884 4.7e-126 IQ reductase
GKBPBIME_01885 4.7e-163 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
GKBPBIME_01886 8.2e-174 fabK 1.3.1.9 S Nitronate monooxygenase
GKBPBIME_01887 1.2e-33 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GKBPBIME_01888 5.9e-177 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GKBPBIME_01889 6.2e-76 marR K Winged helix DNA-binding domain
GKBPBIME_01890 3.1e-72 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
GKBPBIME_01891 1e-192 bioH 2.1.1.197, 3.1.1.85, 3.7.1.13, 3.7.1.9, 4.2.99.20 E Alpha/beta hydrolase family
GKBPBIME_01892 2.3e-226 bdhA C Iron-containing alcohol dehydrogenase
GKBPBIME_01893 1.4e-47 S Uncharacterized protein conserved in bacteria (DUF2316)
GKBPBIME_01894 9.1e-66 K MarR family
GKBPBIME_01895 1.3e-12 S response to antibiotic
GKBPBIME_01896 1.3e-110 S Putative esterase
GKBPBIME_01897 5.3e-198
GKBPBIME_01898 2.4e-104 rmaB K Transcriptional regulator, MarR family
GKBPBIME_01899 0.0 lmrA 3.6.3.44 V ABC transporter
GKBPBIME_01900 3.8e-84 F NUDIX domain
GKBPBIME_01901 3.9e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GKBPBIME_01902 3.8e-20
GKBPBIME_01903 1.8e-118 S zinc-ribbon domain
GKBPBIME_01904 4.4e-200 pbpX1 V Beta-lactamase
GKBPBIME_01905 1.2e-186 K AI-2E family transporter
GKBPBIME_01906 1.3e-128 srtA 3.4.22.70 M Sortase family
GKBPBIME_01908 7.6e-65 gtcA S Teichoic acid glycosylation protein
GKBPBIME_01909 6e-174 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GKBPBIME_01910 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GKBPBIME_01911 4e-167 gbuC E glycine betaine
GKBPBIME_01912 2e-131 proW E glycine betaine
GKBPBIME_01913 4.5e-222 gbuA 3.6.3.32 E glycine betaine
GKBPBIME_01914 9.2e-138 sfsA S Belongs to the SfsA family
GKBPBIME_01915 1.8e-67 usp1 T Universal stress protein family
GKBPBIME_01916 1e-251 yxbA 6.3.1.12 S ATP-grasp enzyme
GKBPBIME_01918 2.4e-130 thrB 2.7.1.39, 4.2.3.1 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GKBPBIME_01919 3.2e-286 thrC 4.2.3.1 E Threonine synthase
GKBPBIME_01920 6.4e-229 hom 1.1.1.3 E homoserine dehydrogenase
GKBPBIME_01921 1.1e-250 yclM 2.7.2.4 E Belongs to the aspartokinase family
GKBPBIME_01922 1.1e-166 yqiK S SPFH domain / Band 7 family
GKBPBIME_01923 2.3e-39
GKBPBIME_01924 2.5e-173 pfoS S Phosphotransferase system, EIIC
GKBPBIME_01925 8e-177 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GKBPBIME_01926 7.1e-217 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
GKBPBIME_01927 2.5e-47
GKBPBIME_01928 1.8e-119 L Transposase DDE domain
GKBPBIME_01929 4.1e-59
GKBPBIME_01930 0.0 pepF E Oligopeptidase F
GKBPBIME_01931 3.2e-49 V ABC transporter transmembrane region
GKBPBIME_01932 9.3e-226 V ABC transporter transmembrane region
GKBPBIME_01933 1.7e-171 K Helix-turn-helix XRE-family like proteins
GKBPBIME_01934 5.5e-86 C FMN binding
GKBPBIME_01935 1.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GKBPBIME_01936 3.2e-170 mleP S Sodium Bile acid symporter family
GKBPBIME_01937 0.0 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
GKBPBIME_01938 1.5e-155 mleR K LysR family
GKBPBIME_01939 1.3e-173 corA P CorA-like Mg2+ transporter protein
GKBPBIME_01940 5.7e-61 yeaO S Protein of unknown function, DUF488
GKBPBIME_01941 7.9e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GKBPBIME_01942 2.7e-70
GKBPBIME_01943 3.3e-88 ywrF S Flavin reductase like domain
GKBPBIME_01944 2.1e-166 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
GKBPBIME_01945 2.7e-45
GKBPBIME_01946 5.7e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GKBPBIME_01947 3.1e-24
GKBPBIME_01948 3.2e-209 yubA S AI-2E family transporter
GKBPBIME_01949 7.5e-80
GKBPBIME_01950 3.5e-53
GKBPBIME_01952 3.1e-192 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GKBPBIME_01953 8.7e-42
GKBPBIME_01954 1.2e-41 ygbF S Sugar efflux transporter for intercellular exchange
GKBPBIME_01955 1.5e-58 K Transcriptional regulator PadR-like family
GKBPBIME_01956 2.8e-188 K DNA-binding helix-turn-helix protein
GKBPBIME_01959 1.3e-22 S Bacteriophage abortive infection AbiH
GKBPBIME_01960 9.5e-135 3.6.1.13, 3.6.1.55 F NUDIX domain
GKBPBIME_01961 9.9e-108 pncA Q Isochorismatase family
GKBPBIME_01962 2.4e-267 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GKBPBIME_01963 1.5e-211 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
GKBPBIME_01964 1.9e-64 ugpA P ABC-type sugar transport systems, permease components
GKBPBIME_01965 3.3e-80 ugpA P ABC-type sugar transport systems, permease components
GKBPBIME_01966 3.4e-149 ugpE G ABC transporter permease
GKBPBIME_01967 1.7e-149 ugpB G Bacterial extracellular solute-binding protein
GKBPBIME_01968 1.8e-135 mga K M protein trans-acting positive regulator
GKBPBIME_01969 1.2e-86
GKBPBIME_01970 0.0 S Bacterial membrane protein YfhO
GKBPBIME_01971 4.1e-150 licT2 K CAT RNA binding domain
GKBPBIME_01972 0.0 bglH 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GKBPBIME_01973 2.2e-284 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GKBPBIME_01974 1.1e-256 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
GKBPBIME_01975 1.9e-247 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
GKBPBIME_01976 1.5e-52
GKBPBIME_01977 2.5e-65
GKBPBIME_01978 5.7e-172 hprA 1.1.1.29 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GKBPBIME_01979 2.5e-190 L Psort location Cytoplasmic, score
GKBPBIME_01980 6.2e-34
GKBPBIME_01981 2.6e-24
GKBPBIME_01982 2.8e-102
GKBPBIME_01983 4.7e-73 K helix_turn_helix multiple antibiotic resistance protein
GKBPBIME_01984 6e-239 ydiC1 EGP Major facilitator Superfamily
GKBPBIME_01985 0.0 pbpC M NTF2-like N-terminal transpeptidase domain
GKBPBIME_01986 6.9e-35 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
GKBPBIME_01987 3.1e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GKBPBIME_01988 1.8e-44 S Phage gp6-like head-tail connector protein
GKBPBIME_01989 5.7e-43 S Phage capsid family
GKBPBIME_01990 3.8e-177 S Phage capsid family
GKBPBIME_01991 2.4e-44 S Phage portal protein
GKBPBIME_01992 4.4e-141 S Phage portal protein
GKBPBIME_01994 1e-103 sip L Belongs to the 'phage' integrase family
GKBPBIME_01995 3.8e-125 lctO C IMP dehydrogenase / GMP reductase domain
GKBPBIME_01996 2.6e-65 nrp 1.20.4.1 P ArsC family
GKBPBIME_01997 0.0 clpL O associated with various cellular activities
GKBPBIME_01998 3.1e-144 ywqE 3.1.3.48 GM PHP domain protein
GKBPBIME_01999 5.4e-156 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GKBPBIME_02000 3.2e-115 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GKBPBIME_02001 4.2e-49 tnp2PF3 L Transposase DDE domain
GKBPBIME_02002 1.6e-155 glcU U sugar transport
GKBPBIME_02003 2.4e-22 J Putative rRNA methylase
GKBPBIME_02004 1.9e-35 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
GKBPBIME_02005 7.3e-49 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GKBPBIME_02006 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
GKBPBIME_02007 3.5e-185 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
GKBPBIME_02008 2.7e-38 rafA 3.2.1.22 G alpha-galactosidase
GKBPBIME_02009 3.4e-162 repA S Replication initiator protein A
GKBPBIME_02010 9.6e-43 relB L Addiction module antitoxin, RelB DinJ family
GKBPBIME_02011 5.9e-28
GKBPBIME_02012 4.1e-116 S protein conserved in bacteria
GKBPBIME_02013 1.7e-39
GKBPBIME_02014 5.3e-22
GKBPBIME_02015 0.0 L MobA MobL family protein
GKBPBIME_02016 2.4e-90 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
GKBPBIME_02017 0.0 kup P Transport of potassium into the cell
GKBPBIME_02018 8.7e-167 V ATPases associated with a variety of cellular activities
GKBPBIME_02019 1.9e-217 S ABC-2 family transporter protein
GKBPBIME_02020 1.7e-196
GKBPBIME_02021 2.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GKBPBIME_02022 1.4e-164 S Tetratricopeptide repeat
GKBPBIME_02023 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GKBPBIME_02024 1.8e-50
GKBPBIME_02025 5.4e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GKBPBIME_02027 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
GKBPBIME_02028 1e-169 holA 2.7.7.7 L DNA polymerase III delta subunit
GKBPBIME_02029 0.0 comEC S Competence protein ComEC
GKBPBIME_02030 1.1e-111 comEA L Competence protein ComEA
GKBPBIME_02031 1.4e-181 ylbL T Belongs to the peptidase S16 family
GKBPBIME_02032 1.5e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GKBPBIME_02033 5.9e-100 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
GKBPBIME_02034 2.5e-62 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
GKBPBIME_02035 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
GKBPBIME_02036 2.2e-210 ftsW D Belongs to the SEDS family
GKBPBIME_02037 0.0 typA T GTP-binding protein TypA
GKBPBIME_02038 1.3e-145 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
GKBPBIME_02039 2.4e-46 yktA S Belongs to the UPF0223 family
GKBPBIME_02040 1.1e-156 1.1.1.27 C L-malate dehydrogenase activity
GKBPBIME_02041 2.4e-259 lpdA 1.8.1.4 C Dehydrogenase
GKBPBIME_02042 1.2e-265 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
GKBPBIME_02043 1.4e-181 pdhB 1.2.4.1, 1.2.4.4 C Transketolase, C-terminal domain protein
GKBPBIME_02044 2.5e-211 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
GKBPBIME_02045 5.2e-89 S E1-E2 ATPase
GKBPBIME_02046 2.9e-99 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GKBPBIME_02047 1.3e-45
GKBPBIME_02048 9.5e-69
GKBPBIME_02049 2.9e-31 ykzG S Belongs to the UPF0356 family
GKBPBIME_02050 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GKBPBIME_02051 6.1e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GKBPBIME_02052 1.4e-244 els S Sterol carrier protein domain
GKBPBIME_02053 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GKBPBIME_02054 5.3e-116 S Repeat protein
GKBPBIME_02055 9.9e-123 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
GKBPBIME_02056 1.5e-245 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GKBPBIME_02057 0.0 uvrA2 L ABC transporter
GKBPBIME_02058 8.3e-57 XK27_04120 S Putative amino acid metabolism
GKBPBIME_02059 1.3e-218 iscS 2.8.1.7 E Aminotransferase class V
GKBPBIME_02060 4.8e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GKBPBIME_02061 4.3e-29
GKBPBIME_02062 1.4e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
GKBPBIME_02063 2e-115 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
GKBPBIME_02064 6.7e-210 yaaN P Toxic anion resistance protein (TelA)
GKBPBIME_02065 2.4e-262 ydiC1 EGP Major facilitator Superfamily
GKBPBIME_02066 6.7e-154 pstS P Phosphate
GKBPBIME_02067 6.9e-36 cspA K Cold shock protein
GKBPBIME_02068 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GKBPBIME_02069 5.7e-85 divIVA D DivIVA protein
GKBPBIME_02070 5.7e-146 ylmH S S4 domain protein
GKBPBIME_02071 2.4e-44 yggT S integral membrane protein
GKBPBIME_02072 8.7e-78 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GKBPBIME_02073 3.1e-226 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GKBPBIME_02074 2.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GKBPBIME_02075 5.7e-155 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GKBPBIME_02076 2.5e-200 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GKBPBIME_02077 6e-263 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GKBPBIME_02078 7.5e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GKBPBIME_02079 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
GKBPBIME_02080 3.1e-49 ftsL D cell division protein FtsL
GKBPBIME_02081 2.4e-170 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GKBPBIME_02082 9.8e-79 mraZ K Belongs to the MraZ family
GKBPBIME_02083 4.2e-45
GKBPBIME_02084 3.1e-270 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GKBPBIME_02085 1.2e-151 aatB ET ABC transporter substrate-binding protein
GKBPBIME_02086 1.5e-112 glnQ 3.6.3.21 E ABC transporter
GKBPBIME_02087 1.2e-109 artQ P ABC transporter permease
GKBPBIME_02088 2.6e-141 minD D Belongs to the ParA family
GKBPBIME_02089 2.2e-114 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
GKBPBIME_02090 2.3e-85 mreD M rod shape-determining protein MreD
GKBPBIME_02091 2.1e-149 mreC M Involved in formation and maintenance of cell shape
GKBPBIME_02092 1e-179 mreB D cell shape determining protein MreB
GKBPBIME_02093 2e-118 radC L DNA repair protein
GKBPBIME_02094 1.1e-113 S Haloacid dehalogenase-like hydrolase
GKBPBIME_02095 2.3e-240 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GKBPBIME_02096 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GKBPBIME_02097 6.3e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GKBPBIME_02098 1.1e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GKBPBIME_02099 8.1e-214 iscS2 2.8.1.7 E Aminotransferase class V
GKBPBIME_02100 2.5e-271 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GKBPBIME_02101 5.1e-84 ytsP 1.8.4.14 T GAF domain-containing protein
GKBPBIME_02102 6.1e-111 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GKBPBIME_02103 2.4e-69 K Cro/C1-type HTH DNA-binding domain
GKBPBIME_02104 0.0 yhgF K Tex-like protein N-terminal domain protein
GKBPBIME_02105 4.9e-11
GKBPBIME_02106 3e-129 S Protein of unknown function C-terminus (DUF2399)
GKBPBIME_02107 0.0 D Putative exonuclease SbcCD, C subunit
GKBPBIME_02108 2.3e-139
GKBPBIME_02109 8.5e-231
GKBPBIME_02110 4.8e-46 S Protein of unknown function (DUF2568)
GKBPBIME_02111 1e-66 K helix_turn_helix, mercury resistance
GKBPBIME_02112 1.4e-208
GKBPBIME_02113 4.4e-158 yvfR V ABC transporter
GKBPBIME_02114 6.5e-134 yvfS V ABC-2 type transporter
GKBPBIME_02115 9.6e-203 desK 2.7.13.3 T Histidine kinase
GKBPBIME_02116 1.2e-103 desR K helix_turn_helix, Lux Regulon
GKBPBIME_02117 6.3e-154 S Uncharacterised protein, DegV family COG1307
GKBPBIME_02118 6.8e-127 tnp L DDE domain
GKBPBIME_02119 7.3e-72 ybfG M peptidoglycan-binding domain-containing protein
GKBPBIME_02121 1.4e-49 S Protein of unknown function (DUF1093)
GKBPBIME_02122 5.1e-31 treB G phosphotransferase system
GKBPBIME_02123 3.6e-48 yleF K Helix-turn-helix domain, rpiR family
GKBPBIME_02124 1.3e-93 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GKBPBIME_02125 1.7e-79 4.2.1.126 S Bacterial protein of unknown function (DUF871)
GKBPBIME_02126 7.3e-219 2.7.1.211 G phosphotransferase system
GKBPBIME_02127 5.3e-111 S Putative esterase
GKBPBIME_02128 2.7e-27
GKBPBIME_02129 1.1e-292 clcA P chloride
GKBPBIME_02130 2.2e-194 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GKBPBIME_02132 2.1e-48 tnp2PF3 L Transposase DDE domain
GKBPBIME_02133 1.3e-108
GKBPBIME_02136 0.0
GKBPBIME_02137 3.5e-70 adhR K helix_turn_helix, mercury resistance
GKBPBIME_02138 7.1e-87 bioY S BioY family
GKBPBIME_02139 1.4e-62
GKBPBIME_02140 3.1e-225 queG 1.17.99.6 C Domain of unknown function (DUF1730)
GKBPBIME_02141 4.3e-144 ptp3 3.1.3.48 T Tyrosine phosphatase family
GKBPBIME_02142 1.8e-55 K Helix-turn-helix XRE-family like proteins
GKBPBIME_02144 0.0 asnB 6.3.5.4 E Asparagine synthase
GKBPBIME_02145 3e-71 FG Scavenger mRNA decapping enzyme C-term binding
GKBPBIME_02146 2.3e-125 WQ51_05710 S Mitochondrial biogenesis AIM24
GKBPBIME_02147 5e-134 S ABC-2 family transporter protein
GKBPBIME_02148 1.4e-133 S ABC transporter
GKBPBIME_02149 3.9e-26 S Protein of unknown function (DUF2785)
GKBPBIME_02150 7.7e-100
GKBPBIME_02151 1.6e-52
GKBPBIME_02153 1.2e-62
GKBPBIME_02154 9.9e-62 S MucBP domain
GKBPBIME_02155 2.1e-102 ywnB S NAD(P)H-binding
GKBPBIME_02158 1.1e-122 E lipolytic protein G-D-S-L family
GKBPBIME_02159 9.4e-70 feoA P FeoA
GKBPBIME_02160 9.5e-22 feoB P transporter of a GTP-driven Fe(2 ) uptake system
GKBPBIME_02161 2.3e-102 yncA 2.3.1.79 S Maltose acetyltransferase
GKBPBIME_02162 3.8e-54 S Enterocin A Immunity
GKBPBIME_02164 2.9e-54
GKBPBIME_02166 1e-142 S CAAX protease self-immunity
GKBPBIME_02168 1.3e-284 pipD E Dipeptidase
GKBPBIME_02169 3.1e-105 S Membrane
GKBPBIME_02170 6.2e-103
GKBPBIME_02171 4.8e-94 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
GKBPBIME_02172 3.5e-219 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
GKBPBIME_02173 1.1e-169 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GKBPBIME_02174 1.1e-23 L 4.5 Transposon and IS
GKBPBIME_02175 9e-127 tnp L DDE domain
GKBPBIME_02178 5.6e-128 soj D CobQ CobB MinD ParA nucleotide binding domain protein
GKBPBIME_02179 1.2e-256 repE K Primase C terminal 1 (PriCT-1)
GKBPBIME_02180 2e-41 S Phospholipase A2
GKBPBIME_02182 4e-68 K Tetracyclin repressor, C-terminal all-alpha domain
GKBPBIME_02183 7.7e-60 V ABC-2 type transporter
GKBPBIME_02184 1.5e-10 V ABC-2 type transporter
GKBPBIME_02185 1.4e-58 P ABC-2 family transporter protein
GKBPBIME_02186 7.3e-291 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GKBPBIME_02187 3.5e-188 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GKBPBIME_02188 5e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GKBPBIME_02189 3e-162 S WxL domain surface cell wall-binding
GKBPBIME_02190 5e-185 S Bacterial protein of unknown function (DUF916)
GKBPBIME_02191 1e-156 S Protein of unknown function C-terminal (DUF3324)
GKBPBIME_02192 0.0 S Leucine-rich repeat (LRR) protein
GKBPBIME_02193 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GKBPBIME_02194 1.3e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GKBPBIME_02195 3e-240 tilS 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GKBPBIME_02196 9.3e-70 yabR J RNA binding
GKBPBIME_02197 1.1e-66 divIC D cell cycle
GKBPBIME_02198 2.7e-39 yabO J S4 domain protein
GKBPBIME_02199 9.5e-281 yabM S Polysaccharide biosynthesis protein
GKBPBIME_02200 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GKBPBIME_02201 1.1e-101 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GKBPBIME_02202 4.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GKBPBIME_02203 1.5e-261 S Putative peptidoglycan binding domain
GKBPBIME_02204 2.3e-119 S (CBS) domain
GKBPBIME_02205 1.8e-99 yciB M ErfK YbiS YcfS YnhG
GKBPBIME_02207 3e-119 gltD 1.4.1.13, 1.4.1.14 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GKBPBIME_02208 9.5e-132 gltD 1.4.1.13, 1.4.1.14 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GKBPBIME_02209 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1, 2.1.1.21 E GXGXG motif
GKBPBIME_02210 3.3e-68 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1, 2.1.1.21 E GXGXG motif
GKBPBIME_02211 1.1e-84 S QueT transporter
GKBPBIME_02212 5.6e-62 ndoA L Toxic component of a toxin-antitoxin (TA) module
GKBPBIME_02213 5.2e-32
GKBPBIME_02214 9.1e-217 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GKBPBIME_02215 8.5e-63 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GKBPBIME_02216 7e-265 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GKBPBIME_02218 8.7e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GKBPBIME_02219 1.1e-144
GKBPBIME_02220 9.6e-123 S Tetratricopeptide repeat
GKBPBIME_02221 4.1e-124
GKBPBIME_02222 1.2e-65
GKBPBIME_02223 2.5e-42 rpmE2 J Ribosomal protein L31
GKBPBIME_02224 1.6e-235 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GKBPBIME_02225 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GKBPBIME_02226 1.3e-157 S Protein of unknown function (DUF1211)
GKBPBIME_02227 1.7e-53 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GKBPBIME_02228 1e-78 ywiB S Domain of unknown function (DUF1934)
GKBPBIME_02229 4.3e-155 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
GKBPBIME_02230 7.9e-268 ywfO S HD domain protein
GKBPBIME_02231 2.4e-80 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L NUDIX domain
GKBPBIME_02232 1.8e-179 S DUF218 domain
GKBPBIME_02233 2.1e-53 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GKBPBIME_02234 7.2e-209 Q Imidazolonepropionase and related amidohydrolases
GKBPBIME_02235 1.7e-233 dapE 3.5.1.18 E Peptidase dimerisation domain
GKBPBIME_02236 9.6e-193 E glutamate:sodium symporter activity
GKBPBIME_02237 2.6e-55 nudA S ASCH
GKBPBIME_02238 1.3e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GKBPBIME_02239 6.5e-217 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GKBPBIME_02240 5.4e-220 ysaA V RDD family
GKBPBIME_02241 1e-151 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
GKBPBIME_02242 7.7e-120 ybbL S ABC transporter, ATP-binding protein
GKBPBIME_02243 9e-120 ybbM S Uncharacterised protein family (UPF0014)
GKBPBIME_02244 1.3e-159 czcD P cation diffusion facilitator family transporter
GKBPBIME_02245 6.7e-181 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GKBPBIME_02246 1.1e-37 veg S Biofilm formation stimulator VEG
GKBPBIME_02247 1.5e-158 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GKBPBIME_02248 7.3e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GKBPBIME_02249 1.8e-147 tatD L hydrolase, TatD family
GKBPBIME_02250 5.8e-80 manR 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G phosphoenolpyruvate-dependent sugar phosphotransferase system
GKBPBIME_02251 5.6e-186 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
GKBPBIME_02252 2.4e-172 yqhA G Aldose 1-epimerase
GKBPBIME_02253 4.7e-123 T LytTr DNA-binding domain
GKBPBIME_02254 3.6e-139 2.7.13.3 T GHKL domain
GKBPBIME_02255 0.0 V ABC transporter
GKBPBIME_02256 0.0 V ABC transporter
GKBPBIME_02257 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GKBPBIME_02258 4.3e-174 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
GKBPBIME_02259 7.3e-152 yunF F Protein of unknown function DUF72
GKBPBIME_02260 1.2e-90 3.6.1.55 F NUDIX domain
GKBPBIME_02261 6e-171 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GKBPBIME_02262 1.6e-106 yiiE S Protein of unknown function (DUF1211)
GKBPBIME_02263 2.4e-127 cobB K Sir2 family
GKBPBIME_02264 1.4e-16
GKBPBIME_02265 6.1e-171
GKBPBIME_02266 9.4e-97 yxkA S Phosphatidylethanolamine-binding protein
GKBPBIME_02267 1.6e-18
GKBPBIME_02268 1.1e-149 ypuA S Protein of unknown function (DUF1002)
GKBPBIME_02269 2.7e-174 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GKBPBIME_02270 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GKBPBIME_02271 2.1e-285 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GKBPBIME_02272 2.9e-176 S Aldo keto reductase
GKBPBIME_02273 1.4e-153 Q Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
GKBPBIME_02274 8.1e-93 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
GKBPBIME_02275 6.3e-241 dinF V MatE
GKBPBIME_02276 7.3e-110 S TPM domain
GKBPBIME_02277 1e-102 lemA S LemA family
GKBPBIME_02278 1.6e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GKBPBIME_02279 1.5e-50 V efflux transmembrane transporter activity
GKBPBIME_02280 1.6e-142 V efflux transmembrane transporter activity
GKBPBIME_02281 1.4e-27 V ATPases associated with a variety of cellular activities
GKBPBIME_02282 2.2e-75 K Copper transport repressor CopY TcrY
GKBPBIME_02283 0.0 copB 3.6.3.4 P E1-E2 ATPase
GKBPBIME_02284 3e-38 mdt(A) EGP Major facilitator Superfamily
GKBPBIME_02285 0.0 O Belongs to the peptidase S8 family
GKBPBIME_02286 3.4e-95 O Belongs to the peptidase S8 family
GKBPBIME_02287 9.2e-270 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
GKBPBIME_02288 1.6e-189 ybiR P Citrate transporter
GKBPBIME_02289 1.3e-35 S Protein of unknown function (DUF1722)
GKBPBIME_02290 1.2e-30 L Uncharacterised protein family (UPF0236)
GKBPBIME_02292 6.3e-159
GKBPBIME_02293 1.4e-49
GKBPBIME_02294 3.1e-56
GKBPBIME_02295 2.4e-58 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
GKBPBIME_02296 2.3e-09 L Transposase and inactivated derivatives, IS30 family
GKBPBIME_02297 1e-12 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
GKBPBIME_02298 0.0 dld 1.1.5.12 C D-lactate dehydrogenase, membrane binding
GKBPBIME_02299 1.4e-98 GM NAD(P)H-binding
GKBPBIME_02300 1.8e-151 2.3.1.128 K Acetyltransferase (GNAT) domain
GKBPBIME_02301 7.4e-88 K Acetyltransferase (GNAT) domain
GKBPBIME_02302 1.4e-48 M COG0463 Glycosyltransferases involved in cell wall biogenesis
GKBPBIME_02303 1.8e-66 M Glycosyl transferases group 1
GKBPBIME_02304 3e-116 K CAT RNA binding domain
GKBPBIME_02305 1.3e-75 S Metallo-beta-lactamase superfamily
GKBPBIME_02306 4.9e-38 L Transposase and inactivated derivatives
GKBPBIME_02307 3.1e-248 G MFS/sugar transport protein
GKBPBIME_02308 3.2e-55 yphJ 4.1.1.44 S decarboxylase
GKBPBIME_02309 1.8e-77 yphH S Cupin domain
GKBPBIME_02310 4.8e-157 K Transcriptional regulator
GKBPBIME_02311 1.5e-98 S ABC-2 family transporter protein
GKBPBIME_02312 7.5e-169 bcrA V AAA domain, putative AbiEii toxin, Type IV TA system
GKBPBIME_02313 4.9e-117 T Transcriptional regulatory protein, C terminal
GKBPBIME_02314 1.9e-156 T GHKL domain
GKBPBIME_02315 0.0 oppA E ABC transporter, substratebinding protein
GKBPBIME_02316 1.2e-157 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
GKBPBIME_02317 5.2e-133 dck 2.7.1.74 F deoxynucleoside kinase
GKBPBIME_02318 1.6e-137 pnuC H nicotinamide mononucleotide transporter
GKBPBIME_02319 2.1e-171 IQ NAD dependent epimerase/dehydratase family
GKBPBIME_02320 5.2e-153 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GKBPBIME_02321 4.3e-121 G alpha-ribazole phosphatase activity
GKBPBIME_02322 2.8e-149 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GKBPBIME_02323 7.6e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
GKBPBIME_02324 2.2e-108 yktB S Belongs to the UPF0637 family
GKBPBIME_02325 6e-76 yueI S Protein of unknown function (DUF1694)
GKBPBIME_02326 0.0 gshF 6.3.2.2, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
GKBPBIME_02327 3e-240 rarA L recombination factor protein RarA
GKBPBIME_02329 1.1e-38
GKBPBIME_02330 2.9e-82 usp6 T universal stress protein
GKBPBIME_02331 6.1e-152 2.3.1.19 K Helix-turn-helix XRE-family like proteins
GKBPBIME_02332 3.4e-115 yhfA S HAD hydrolase, family IA, variant 3
GKBPBIME_02333 5.8e-180 S Protein of unknown function (DUF2785)
GKBPBIME_02334 2.9e-66 yueI S Protein of unknown function (DUF1694)
GKBPBIME_02335 2.7e-22
GKBPBIME_02336 1.1e-280 sufB O assembly protein SufB
GKBPBIME_02337 1e-78 nifU C SUF system FeS assembly protein, NifU family
GKBPBIME_02338 1e-218 csdA 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GKBPBIME_02339 1.1e-189 sufD O FeS assembly protein SufD
GKBPBIME_02340 2.9e-142 sufC O FeS assembly ATPase SufC
GKBPBIME_02341 3.7e-104 metI P ABC transporter permease
GKBPBIME_02342 2.3e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GKBPBIME_02343 2e-149 P Belongs to the nlpA lipoprotein family
GKBPBIME_02344 4e-137 P Belongs to the nlpA lipoprotein family
GKBPBIME_02345 7.5e-222 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GKBPBIME_02346 9.5e-49 gcvH E glycine cleavage
GKBPBIME_02347 5.3e-223 rodA D Belongs to the SEDS family
GKBPBIME_02348 1.1e-30 S Protein of unknown function (DUF2969)
GKBPBIME_02349 9.1e-55 yidD S Could be involved in insertion of integral membrane proteins into the membrane
GKBPBIME_02350 2.2e-18 epuA S DNA-directed RNA polymerase subunit beta
GKBPBIME_02351 9.4e-178 mbl D Cell shape determining protein MreB Mrl
GKBPBIME_02352 4.2e-31 ywzB S Protein of unknown function (DUF1146)
GKBPBIME_02353 8.3e-70 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GKBPBIME_02354 1.3e-244 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GKBPBIME_02355 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GKBPBIME_02356 9.5e-286 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GKBPBIME_02357 5.9e-89 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GKBPBIME_02358 8.6e-39 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GKBPBIME_02359 3.3e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GKBPBIME_02360 7.9e-126 atpB C it plays a direct role in the translocation of protons across the membrane
GKBPBIME_02361 5.7e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GKBPBIME_02362 4.4e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GKBPBIME_02363 3.1e-184 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GKBPBIME_02364 5.7e-152 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GKBPBIME_02365 5.6e-176 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GKBPBIME_02366 1.3e-110 tdk 2.7.1.21 F thymidine kinase
GKBPBIME_02367 2.5e-261 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
GKBPBIME_02368 3.5e-196 ampC V Beta-lactamase
GKBPBIME_02369 2e-163 1.13.11.2 S glyoxalase
GKBPBIME_02370 3.9e-139 S NADPH-dependent FMN reductase
GKBPBIME_02371 0.0 yfiC V ABC transporter
GKBPBIME_02372 0.0 ycfI V ABC transporter, ATP-binding protein
GKBPBIME_02373 2.2e-119 K Bacterial regulatory proteins, tetR family
GKBPBIME_02374 7.2e-127 G Phosphoglycerate mutase family
GKBPBIME_02375 1.6e-07
GKBPBIME_02377 1.2e-285 pipD E Dipeptidase
GKBPBIME_02378 1.4e-104 S Protein of unknown function (DUF1211)
GKBPBIME_02379 3.9e-210 yttB EGP Major facilitator Superfamily
GKBPBIME_02380 3.2e-13
GKBPBIME_02381 1.1e-78 tspO T TspO/MBR family
GKBPBIME_02383 2.9e-78 guaD 3.5.4.12, 3.5.4.3, 3.5.4.33 FJ MafB19-like deaminase
GKBPBIME_02384 1e-173 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
GKBPBIME_02385 6.6e-231 wbbX GT2,GT4 M Glycosyl transferases group 1
GKBPBIME_02386 3e-43 yttA 2.7.13.3 S Pfam Transposase IS66
GKBPBIME_02387 1.6e-149 F DNA/RNA non-specific endonuclease
GKBPBIME_02389 8.6e-47 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
GKBPBIME_02390 1.3e-134 S Domain of unknown function DUF1829
GKBPBIME_02391 5.6e-258 pgi 5.3.1.9 G Belongs to the GPI family
GKBPBIME_02392 5.9e-152 glcU U sugar transport
GKBPBIME_02393 1.4e-110 vanZ V VanZ like family
GKBPBIME_02394 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GKBPBIME_02395 5.2e-104
GKBPBIME_02396 8e-105
GKBPBIME_02397 1.8e-245 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GKBPBIME_02398 1.9e-203 purK2 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GKBPBIME_02399 8.9e-240 pbuX F xanthine permease
GKBPBIME_02400 1.4e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GKBPBIME_02401 1.9e-115 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
GKBPBIME_02402 1.2e-82 yvbK 3.1.3.25 K GNAT family
GKBPBIME_02403 7.9e-31 cspC K Cold shock protein
GKBPBIME_02404 6.6e-168 yqjA S Putative aromatic acid exporter C-terminal domain
GKBPBIME_02405 2.7e-77
GKBPBIME_02406 6.2e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
GKBPBIME_02407 0.0 S Psort location CytoplasmicMembrane, score
GKBPBIME_02408 1.7e-215 L Transposase DDE domain group 1
GKBPBIME_02410 2.8e-72 cpsE M Bacterial sugar transferase
GKBPBIME_02411 4.1e-200 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GKBPBIME_02412 4.6e-72 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
GKBPBIME_02413 6.7e-20 S Bacteriophage abortive infection AbiH
GKBPBIME_02414 9.3e-70 yqeB S Pyrimidine dimer DNA glycosylase
GKBPBIME_02415 1.7e-69 pdxH S Pyridoxamine 5'-phosphate oxidase
GKBPBIME_02416 3.2e-46 ligA 6.5.1.2 L BRCA1 C Terminus (BRCT) domain
GKBPBIME_02417 2.6e-115 L Resolvase, N terminal domain
GKBPBIME_02418 4.3e-103
GKBPBIME_02419 5.2e-35
GKBPBIME_02420 2e-88 Q Methyltransferase
GKBPBIME_02421 4.4e-52 sugE U Multidrug resistance protein
GKBPBIME_02422 9.5e-135 S -acetyltransferase
GKBPBIME_02423 4.7e-93 MA20_25245 K FR47-like protein
GKBPBIME_02424 6.4e-93 hisB 2.7.7.71, 3.1.3.15, 3.1.3.82, 3.1.3.83, 4.2.1.19, 5.3.1.28, 6.3.2.10 GT9 E HAD-hyrolase-like
GKBPBIME_02425 2.3e-125 1.1.1.1 C nadph quinone reductase
GKBPBIME_02426 1.7e-54 1.1.1.1 C nadph quinone reductase
GKBPBIME_02427 8.6e-139 wzb 3.1.3.48 T Tyrosine phosphatase family
GKBPBIME_02428 4.5e-86 K Acetyltransferase (GNAT) domain
GKBPBIME_02429 9e-83 yiaC K Acetyltransferase (GNAT) domain
GKBPBIME_02430 1.2e-74 2.3.1.82 K Acetyltransferase (GNAT) domain
GKBPBIME_02431 1.8e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GKBPBIME_02432 4.1e-198 ybiR P Citrate transporter
GKBPBIME_02433 2.1e-69
GKBPBIME_02434 7.6e-255 E Peptidase dimerisation domain
GKBPBIME_02435 1.3e-298 E ABC transporter, substratebinding protein
GKBPBIME_02436 1e-101
GKBPBIME_02437 0.0 cadA P P-type ATPase
GKBPBIME_02438 2.3e-75 hsp3 O Belongs to the small heat shock protein (HSP20) family
GKBPBIME_02439 4.1e-71 S Iron-sulphur cluster biosynthesis
GKBPBIME_02440 4.3e-210 htrA 3.4.21.107 O serine protease
GKBPBIME_02441 1.2e-154 vicX 3.1.26.11 S domain protein
GKBPBIME_02442 3.1e-139 yycI S YycH protein
GKBPBIME_02443 1.1e-254 yycH S YycH protein
GKBPBIME_02444 0.0 vicK 2.7.13.3 T Histidine kinase
GKBPBIME_02445 8.1e-131 K response regulator
GKBPBIME_02446 1.5e-121 3.1.1.24 S Alpha/beta hydrolase family
GKBPBIME_02447 3.5e-258 arpJ P ABC transporter permease
GKBPBIME_02448 3.7e-232 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GKBPBIME_02449 2.4e-264 argH 4.3.2.1 E argininosuccinate lyase
GKBPBIME_02450 3.1e-214 S Bacterial protein of unknown function (DUF871)
GKBPBIME_02451 4.6e-73 S Domain of unknown function (DUF3284)
GKBPBIME_02452 3.6e-228 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GKBPBIME_02453 1.5e-129 K UTRA
GKBPBIME_02454 2.3e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GKBPBIME_02455 2.4e-53 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
GKBPBIME_02456 1.2e-105 speG J Acetyltransferase (GNAT) domain
GKBPBIME_02457 1.7e-84 F NUDIX domain
GKBPBIME_02458 1.9e-89 S AAA domain
GKBPBIME_02459 2.3e-113 ycaC Q Isochorismatase family
GKBPBIME_02460 7.8e-242 ydiC1 EGP Major Facilitator Superfamily
GKBPBIME_02461 2.2e-213 yeaN P Transporter, major facilitator family protein
GKBPBIME_02462 1.6e-171 iolS C Aldo keto reductase
GKBPBIME_02463 3.4e-64 manO S Domain of unknown function (DUF956)
GKBPBIME_02464 9.6e-169 manN G system, mannose fructose sorbose family IID component
GKBPBIME_02465 1.9e-120 manY G PTS system
GKBPBIME_02466 1.4e-181 manL 2.7.1.191, 2.7.1.206 G PTS system sorbose subfamily IIB component
GKBPBIME_02467 4.5e-217 EGP Major facilitator Superfamily
GKBPBIME_02469 6.7e-187 K Helix-turn-helix XRE-family like proteins
GKBPBIME_02470 2.5e-150 K Helix-turn-helix XRE-family like proteins
GKBPBIME_02471 9.6e-158 K Helix-turn-helix XRE-family like proteins
GKBPBIME_02473 9e-287 glnP P ABC transporter permease
GKBPBIME_02474 3.1e-133 glnQ E ABC transporter, ATP-binding protein
GKBPBIME_02475 3.4e-31
GKBPBIME_02476 1.7e-218 G Bacterial extracellular solute-binding protein
GKBPBIME_02477 3.5e-09 G Bacterial extracellular solute-binding protein
GKBPBIME_02478 2.2e-128 S Protein of unknown function (DUF975)
GKBPBIME_02479 4.9e-41 yqkB S Iron-sulphur cluster biosynthesis
GKBPBIME_02480 1e-51
GKBPBIME_02481 1e-68 S Bacterial PH domain
GKBPBIME_02482 3.7e-269 ydbT S Bacterial PH domain
GKBPBIME_02483 9.1e-144 S AAA ATPase domain
GKBPBIME_02484 4.3e-166 yniA G Phosphotransferase enzyme family
GKBPBIME_02485 3.4e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GKBPBIME_02486 1.5e-264 glnP P ABC transporter
GKBPBIME_02487 2.1e-266 glnP P ABC transporter
GKBPBIME_02488 3.7e-99 ydaF J Acetyltransferase (GNAT) domain
GKBPBIME_02489 6.7e-105 S Stage II sporulation protein M
GKBPBIME_02491 1.5e-80 S Uncharacterised protein family (UPF0236)
GKBPBIME_02492 6e-142 yeaC S ATPase family associated with various cellular activities (AAA)
GKBPBIME_02493 3e-184 yeaD S Protein of unknown function DUF58
GKBPBIME_02494 2.3e-306 yebA E Transglutaminase/protease-like homologues
GKBPBIME_02495 1.1e-214 lsgC M Glycosyl transferases group 1
GKBPBIME_02496 4.8e-90 maa 2.3.1.79 S Maltose acetyltransferase
GKBPBIME_02497 2.2e-145 3.1.3.102, 3.1.3.104 G Sucrose-6F-phosphate phosphohydrolase
GKBPBIME_02498 2.7e-255 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
GKBPBIME_02499 4.3e-114 S Bacteriocin-protection, YdeI or OmpD-Associated
GKBPBIME_02500 2.2e-35 yjdF S Protein of unknown function (DUF2992)
GKBPBIME_02501 1.4e-212 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
GKBPBIME_02502 4e-224 maeN C 2-hydroxycarboxylate transporter family
GKBPBIME_02503 1.1e-286 dpiB 2.7.13.3 T Single cache domain 3
GKBPBIME_02504 1.9e-121 dpiA KT cheY-homologous receiver domain
GKBPBIME_02505 4.8e-35 1.1.1.31 I NAD binding domain of 6-phosphogluconate dehydrogenase
GKBPBIME_02506 3e-96 1.1.1.31 I NAD binding domain of 6-phosphogluconate dehydrogenase
GKBPBIME_02507 4.4e-94 M1-431 S Protein of unknown function (DUF1706)
GKBPBIME_02508 7.7e-25
GKBPBIME_02509 6.9e-221 yagE E Amino acid permease
GKBPBIME_02510 8e-171 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GKBPBIME_02511 8.7e-225 ptsG G phosphotransferase system
GKBPBIME_02512 4.5e-40 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GKBPBIME_02513 3.2e-37 L Transposase and inactivated derivatives
GKBPBIME_02515 5.5e-63 ligA 2.7.7.7, 6.5.1.2 L EXOIII
GKBPBIME_02516 1.2e-186 cggR K Putative sugar-binding domain
GKBPBIME_02517 2.8e-193 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GKBPBIME_02518 4.4e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GKBPBIME_02519 7.8e-140 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GKBPBIME_02520 9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GKBPBIME_02521 6.7e-229 mdt(A) EGP Major facilitator Superfamily
GKBPBIME_02522 1.1e-47
GKBPBIME_02523 1.4e-292 clcA P chloride
GKBPBIME_02524 2.4e-31 secG U Preprotein translocase
GKBPBIME_02525 3.8e-139 est 3.1.1.1 S Serine aminopeptidase, S33
GKBPBIME_02526 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GKBPBIME_02527 9.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GKBPBIME_02528 1.3e-176 yvdE K helix_turn _helix lactose operon repressor
GKBPBIME_02529 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
GKBPBIME_02530 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
GKBPBIME_02531 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GKBPBIME_02532 3.7e-120 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
GKBPBIME_02533 4.3e-211 msmX P Belongs to the ABC transporter superfamily
GKBPBIME_02534 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
GKBPBIME_02535 3.2e-223 malE G Bacterial extracellular solute-binding protein
GKBPBIME_02536 1.5e-242 malF P Binding-protein-dependent transport system inner membrane component
GKBPBIME_02537 5.5e-150 malG P ABC transporter permease
GKBPBIME_02538 1.7e-21
GKBPBIME_02539 1.6e-22 ydcG K Helix-turn-helix XRE-family like proteins
GKBPBIME_02540 7.8e-238 YSH1 S Metallo-beta-lactamase superfamily
GKBPBIME_02541 9.8e-231 malE G Bacterial extracellular solute-binding protein
GKBPBIME_02542 1.9e-147 malF G Binding-protein-dependent transport system inner membrane component
GKBPBIME_02543 1.7e-165 malG P ABC-type sugar transport systems, permease components
GKBPBIME_02544 3.5e-194 malK P ATPases associated with a variety of cellular activities
GKBPBIME_02545 3.1e-104 3.2.2.20 K Acetyltransferase (GNAT) domain
GKBPBIME_02546 9e-92 yxjI
GKBPBIME_02547 3.1e-156 ycsE S Sucrose-6F-phosphate phosphohydrolase
GKBPBIME_02548 7.3e-129 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GKBPBIME_02549 6.7e-176 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GKBPBIME_02550 5e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
GKBPBIME_02552 1.8e-167 natA S ABC transporter, ATP-binding protein
GKBPBIME_02553 3.6e-214 ysdA CP ABC-2 family transporter protein
GKBPBIME_02554 2.4e-98 dnaQ 2.7.7.7 L DNA polymerase III
GKBPBIME_02555 7.5e-151 xth 3.1.11.2 L exodeoxyribonuclease III
GKBPBIME_02556 2.4e-167 murB 1.3.1.98 M Cell wall formation
GKBPBIME_02557 0.0 yjcE P Sodium proton antiporter
GKBPBIME_02558 2.9e-96 puuR K Cupin domain
GKBPBIME_02559 1e-204 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GKBPBIME_02560 5.5e-147 potB P ABC transporter permease
GKBPBIME_02561 1.2e-141 potC P ABC transporter permease
GKBPBIME_02562 2.3e-206 potD P ABC transporter
GKBPBIME_02564 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
GKBPBIME_02565 5.7e-110 K Transcriptional regulator
GKBPBIME_02566 2.5e-182 V ABC transporter
GKBPBIME_02567 2.3e-128 V AAA domain, putative AbiEii toxin, Type IV TA system
GKBPBIME_02568 2.2e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GKBPBIME_02569 2.2e-164 ybbR S YbbR-like protein
GKBPBIME_02570 2.6e-255 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GKBPBIME_02571 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GKBPBIME_02573 0.0 pepF2 E Oligopeptidase F
GKBPBIME_02574 1.5e-78 S VanZ like family
GKBPBIME_02575 7.6e-132 yebC K Transcriptional regulatory protein
GKBPBIME_02576 2.7e-152 comGA NU Type II IV secretion system protein
GKBPBIME_02577 6.9e-170 comGB NU type II secretion system
GKBPBIME_02578 2.5e-26
GKBPBIME_02580 2.5e-23
GKBPBIME_02581 1.9e-19
GKBPBIME_02582 9.7e-10
GKBPBIME_02583 8.1e-185 ytxK 2.1.1.72 L N-6 DNA Methylase
GKBPBIME_02584 5.4e-51
GKBPBIME_02585 2.4e-256 cycA E Amino acid permease
GKBPBIME_02586 6.7e-147 arbV 2.3.1.51 I Phosphate acyltransferases
GKBPBIME_02587 2.5e-163 arbx M Glycosyl transferase family 8
GKBPBIME_02588 3.6e-182 arbY M family 8
GKBPBIME_02589 2.8e-165 arbZ I Phosphate acyltransferases
GKBPBIME_02590 0.0 rafA 3.2.1.22 G alpha-galactosidase
GKBPBIME_02593 5.8e-70 S SdpI/YhfL protein family
GKBPBIME_02594 2.1e-134 K response regulator
GKBPBIME_02595 2.9e-271 T PhoQ Sensor
GKBPBIME_02596 3.6e-75 yhbS S acetyltransferase
GKBPBIME_02597 5.3e-14

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)