ORF_ID e_value Gene_name EC_number CAZy COGs Description
KHOHDOKI_00002 8.9e-133 agrA KT phosphorelay signal transduction system
KHOHDOKI_00003 3.8e-238 blpH 2.7.13.3 T protein histidine kinase activity
KHOHDOKI_00005 1.3e-157 mesE M Transport protein ComB
KHOHDOKI_00006 2.7e-44 mesE M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KHOHDOKI_00007 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
KHOHDOKI_00008 0.0 mdlB V abc transporter atp-binding protein
KHOHDOKI_00009 0.0 mdlA V abc transporter atp-binding protein
KHOHDOKI_00011 1.5e-92 XK27_09885 V Glycopeptide antibiotics resistance protein
KHOHDOKI_00012 7.9e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
KHOHDOKI_00013 2.3e-72 yutD J protein conserved in bacteria
KHOHDOKI_00014 1.6e-260 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
KHOHDOKI_00016 2.2e-203 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
KHOHDOKI_00017 5.6e-08 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
KHOHDOKI_00018 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
KHOHDOKI_00019 0.0 ftsI 3.4.16.4 M penicillin-binding protein
KHOHDOKI_00020 5.6e-47 ftsL D cell division protein FtsL
KHOHDOKI_00021 8.2e-154 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
KHOHDOKI_00022 4e-54
KHOHDOKI_00023 1.4e-22
KHOHDOKI_00024 1.1e-33
KHOHDOKI_00026 6.3e-31 yhaI J Protein of unknown function (DUF805)
KHOHDOKI_00027 3.5e-10 D nuclear chromosome segregation
KHOHDOKI_00028 1.7e-60 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
KHOHDOKI_00029 2.1e-152 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
KHOHDOKI_00030 4.4e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
KHOHDOKI_00031 1.4e-287 XK27_00765
KHOHDOKI_00032 1.1e-89 ecsA_2 V abc transporter atp-binding protein
KHOHDOKI_00033 2e-45 ecsA_2 V ATPase activity
KHOHDOKI_00034 1.5e-104 S Protein of unknown function (DUF554)
KHOHDOKI_00035 1.6e-11 S Protein of unknown function (DUF554)
KHOHDOKI_00036 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
KHOHDOKI_00037 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
KHOHDOKI_00038 2.6e-66 liaI S membrane
KHOHDOKI_00039 5.4e-10 XK27_02470 K LytTr DNA-binding domain protein
KHOHDOKI_00040 3.2e-67 KT response to antibiotic
KHOHDOKI_00041 9.1e-18 KT response to antibiotic
KHOHDOKI_00042 1.7e-79 yebC M Membrane
KHOHDOKI_00043 8.5e-18 yebC M Membrane
KHOHDOKI_00044 2.5e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
KHOHDOKI_00045 8.5e-173 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
KHOHDOKI_00046 7.3e-135 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
KHOHDOKI_00047 1.7e-230 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
KHOHDOKI_00048 1.9e-182 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
KHOHDOKI_00049 4.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
KHOHDOKI_00050 4.2e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
KHOHDOKI_00051 2.9e-198 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
KHOHDOKI_00052 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
KHOHDOKI_00054 3e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
KHOHDOKI_00055 2e-171 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
KHOHDOKI_00056 0.0 scrA 2.7.1.211 G pts system
KHOHDOKI_00057 4.1e-291 scrB 3.2.1.26 GH32 G invertase
KHOHDOKI_00058 3.5e-120 scrR K Transcriptional
KHOHDOKI_00059 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
KHOHDOKI_00060 3.4e-62 yqhY S protein conserved in bacteria
KHOHDOKI_00061 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
KHOHDOKI_00062 3.7e-84 comEB 3.5.4.12 F ComE operon protein 2
KHOHDOKI_00063 4.2e-192 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
KHOHDOKI_00066 1.9e-44 V 'abc transporter, ATP-binding protein
KHOHDOKI_00067 4.3e-36 V 'abc transporter, ATP-binding protein
KHOHDOKI_00070 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
KHOHDOKI_00071 1.7e-67 corA P COG0598 Mg2 and Co2 transporters
KHOHDOKI_00072 9.8e-71 corA P COG0598 Mg2 and Co2 transporters
KHOHDOKI_00073 2e-123 XK27_01040 S Pfam PF06570
KHOHDOKI_00075 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
KHOHDOKI_00076 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
KHOHDOKI_00077 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
KHOHDOKI_00079 2.8e-28 XK27_05745
KHOHDOKI_00080 4.2e-230 mutY L A G-specific adenine glycosylase
KHOHDOKI_00084 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
KHOHDOKI_00085 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
KHOHDOKI_00086 3e-93 cvpA S toxin biosynthetic process
KHOHDOKI_00087 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
KHOHDOKI_00088 1.8e-159 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
KHOHDOKI_00089 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
KHOHDOKI_00090 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
KHOHDOKI_00091 8.8e-48 azlD E branched-chain amino acid
KHOHDOKI_00092 1.8e-81 azlC E AzlC protein
KHOHDOKI_00093 1.2e-23 azlC E AzlC protein
KHOHDOKI_00094 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
KHOHDOKI_00095 1.3e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
KHOHDOKI_00096 5.6e-121 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
KHOHDOKI_00097 2.5e-33 ykzG S Belongs to the UPF0356 family
KHOHDOKI_00098 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
KHOHDOKI_00099 7.6e-263 glnA 6.3.1.2 E glutamine synthetase
KHOHDOKI_00100 8.5e-63 glnR K Transcriptional regulator
KHOHDOKI_00101 1.3e-87 S Fusaric acid resistance protein-like
KHOHDOKI_00102 3e-13
KHOHDOKI_00103 2.5e-180 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
KHOHDOKI_00105 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
KHOHDOKI_00106 6.8e-96 ypmS S Protein conserved in bacteria
KHOHDOKI_00107 3.8e-146 ypmR E lipolytic protein G-D-S-L family
KHOHDOKI_00108 1.7e-148 DegV S DegV family
KHOHDOKI_00109 1.3e-304 recN L May be involved in recombinational repair of damaged DNA
KHOHDOKI_00110 7.5e-74 argR K arginine binding
KHOHDOKI_00111 5e-159 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
KHOHDOKI_00112 2.3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
KHOHDOKI_00113 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
KHOHDOKI_00114 3.4e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
KHOHDOKI_00117 1.3e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
KHOHDOKI_00118 2.9e-125 dnaD
KHOHDOKI_00119 3.5e-182 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
KHOHDOKI_00120 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
KHOHDOKI_00121 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
KHOHDOKI_00122 3e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
KHOHDOKI_00123 9.2e-175 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
KHOHDOKI_00124 7.9e-117 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
KHOHDOKI_00125 4.1e-223 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
KHOHDOKI_00126 6.2e-239 rodA D Belongs to the SEDS family
KHOHDOKI_00127 4.4e-68 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
KHOHDOKI_00128 1.3e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
KHOHDOKI_00129 2.2e-139 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
KHOHDOKI_00130 1.8e-121 ylfI S tigr01906
KHOHDOKI_00131 1.7e-142 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
KHOHDOKI_00132 1.5e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
KHOHDOKI_00133 1.3e-215 hemN H Involved in the biosynthesis of porphyrin-containing compound
KHOHDOKI_00137 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
KHOHDOKI_00138 8.3e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
KHOHDOKI_00139 2.4e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
KHOHDOKI_00140 8.2e-207 yurR 1.4.5.1 E oxidoreductase
KHOHDOKI_00141 1.7e-100 zupT P Mediates zinc uptake. May also transport other divalent cations
KHOHDOKI_00142 7e-22 zupT P Mediates zinc uptake. May also transport other divalent cations
KHOHDOKI_00143 9.6e-149 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
KHOHDOKI_00144 1.3e-54 trmK 2.1.1.217 S SAM-dependent methyltransferase
KHOHDOKI_00145 2.7e-59 trmK 2.1.1.217 S SAM-dependent methyltransferase
KHOHDOKI_00146 1.1e-69 gtrA S GtrA-like protein
KHOHDOKI_00147 1.6e-249 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
KHOHDOKI_00148 6e-169 ybbR S Protein conserved in bacteria
KHOHDOKI_00149 5.6e-124 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
KHOHDOKI_00150 8.3e-254 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
KHOHDOKI_00151 8.7e-150 cobQ S glutamine amidotransferase
KHOHDOKI_00152 1.3e-99 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
KHOHDOKI_00153 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
KHOHDOKI_00154 2.2e-131 pip 1.11.1.10 S Alpha beta hydrolase
KHOHDOKI_00155 8.2e-146 uup S abc transporter atp-binding protein
KHOHDOKI_00156 2e-192 uup S abc transporter atp-binding protein
KHOHDOKI_00157 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
KHOHDOKI_00158 1.2e-178 yfmL 3.6.4.13 L DEAD DEAH box helicase
KHOHDOKI_00159 4.3e-12 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
KHOHDOKI_00160 8.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
KHOHDOKI_00161 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
KHOHDOKI_00162 1.1e-37 ptsH G phosphocarrier protein Hpr
KHOHDOKI_00163 2.3e-223 icd 1.1.1.42 C Isocitrate dehydrogenase
KHOHDOKI_00164 5.1e-212 citZ 2.3.3.1 C Belongs to the citrate synthase family
KHOHDOKI_00165 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
KHOHDOKI_00166 2.2e-34 nrdH O Glutaredoxin
KHOHDOKI_00167 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
KHOHDOKI_00168 1.7e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
KHOHDOKI_00170 1.1e-74 L Transposase (IS116 IS110 IS902 family)
KHOHDOKI_00171 5.5e-65 L Transposase (IS116 IS110 IS902 family)
KHOHDOKI_00172 1.8e-165 ypuA S secreted protein
KHOHDOKI_00173 1.1e-55 yaeR E COG0346 LactoylglutaTHIone lyase and related lyases
KHOHDOKI_00174 4.6e-58 srtA 3.4.22.70 M Sortase family
KHOHDOKI_00175 1.1e-59 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
KHOHDOKI_00176 7.6e-257 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
KHOHDOKI_00177 8.5e-118 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
KHOHDOKI_00178 3.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
KHOHDOKI_00179 2.6e-258 noxE P NADH oxidase
KHOHDOKI_00180 4e-262 yfmM S abc transporter atp-binding protein
KHOHDOKI_00181 5.4e-46 XK27_01265 S ECF-type riboflavin transporter, S component
KHOHDOKI_00182 5.4e-09 XK27_01265 S ECF-type riboflavin transporter, S component
KHOHDOKI_00183 5.5e-155 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
KHOHDOKI_00184 2e-86 S ECF-type riboflavin transporter, S component
KHOHDOKI_00186 4.2e-239 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
KHOHDOKI_00187 7e-56 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
KHOHDOKI_00190 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
KHOHDOKI_00191 6.4e-93 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
KHOHDOKI_00192 3.3e-197 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
KHOHDOKI_00193 0.0 smc D Required for chromosome condensation and partitioning
KHOHDOKI_00194 4e-99 smc D Required for chromosome condensation and partitioning
KHOHDOKI_00195 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
KHOHDOKI_00196 3e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
KHOHDOKI_00197 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
KHOHDOKI_00198 2.6e-88 alkD L Dna alkylation repair
KHOHDOKI_00199 1.6e-91 pat 2.3.1.183 M acetyltransferase
KHOHDOKI_00201 3.4e-155 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
KHOHDOKI_00202 0.0 KLT serine threonine protein kinase
KHOHDOKI_00203 3.6e-280 V ABC transporter
KHOHDOKI_00204 2.4e-13 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
KHOHDOKI_00205 3.7e-128 Z012_04635 K sequence-specific DNA binding
KHOHDOKI_00207 3.6e-232 C Radical SAM
KHOHDOKI_00208 3.9e-287 V ABC transporter transmembrane region
KHOHDOKI_00209 5.9e-156 L Replication initiation factor
KHOHDOKI_00210 1.9e-18 S Domain of unknown function (DUF3173)
KHOHDOKI_00211 3.5e-216 int L Belongs to the 'phage' integrase family
KHOHDOKI_00213 5.2e-237 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
KHOHDOKI_00214 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
KHOHDOKI_00215 2.2e-44 yrzL S Belongs to the UPF0297 family
KHOHDOKI_00216 9.5e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
KHOHDOKI_00217 4.2e-44 yrzB S Belongs to the UPF0473 family
KHOHDOKI_00218 3.5e-302 ccs S the current gene model (or a revised gene model) may contain a frame shift
KHOHDOKI_00219 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
KHOHDOKI_00220 7.5e-14
KHOHDOKI_00221 3.4e-91 XK27_10930 K acetyltransferase
KHOHDOKI_00222 2.8e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
KHOHDOKI_00223 1.3e-145 yaaA S Belongs to the UPF0246 family
KHOHDOKI_00224 3.4e-169 XK27_01785 S cog cog1284
KHOHDOKI_00225 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
KHOHDOKI_00227 1.2e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
KHOHDOKI_00228 4.3e-130 metE 2.1.1.14 E Methionine synthase
KHOHDOKI_00229 1.4e-36 metE 2.1.1.14 E Methionine synthase
KHOHDOKI_00230 2e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
KHOHDOKI_00231 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
KHOHDOKI_00234 4.8e-51 yegS 2.7.1.107 I lipid kinase activity
KHOHDOKI_00235 4.4e-96 S Hydrophobic domain protein
KHOHDOKI_00237 7.4e-28 S Membrane
KHOHDOKI_00238 1.4e-101
KHOHDOKI_00239 1.8e-23 S Small integral membrane protein
KHOHDOKI_00240 1.3e-31 M Protein conserved in bacteria
KHOHDOKI_00241 7.2e-45 M Protein conserved in bacteria
KHOHDOKI_00242 2.8e-12 K CsbD-like
KHOHDOKI_00243 2.8e-102 nudL L hydrolase
KHOHDOKI_00244 3.4e-13 nudL L hydrolase
KHOHDOKI_00245 4e-19 K negative regulation of transcription, DNA-templated
KHOHDOKI_00246 4.4e-24 K negative regulation of transcription, DNA-templated
KHOHDOKI_00248 8e-109 S Putative adhesin
KHOHDOKI_00249 5.6e-160 XK27_06930 V domain protein
KHOHDOKI_00250 6.4e-96 XK27_06935 K transcriptional regulator
KHOHDOKI_00251 4.8e-55 ypaA S membrane
KHOHDOKI_00252 2.7e-08
KHOHDOKI_00253 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
KHOHDOKI_00254 8.2e-48 veg S Biofilm formation stimulator VEG
KHOHDOKI_00255 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
KHOHDOKI_00256 6.7e-70 rplI J binds to the 23S rRNA
KHOHDOKI_00257 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
KHOHDOKI_00258 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
KHOHDOKI_00259 4.3e-191 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
KHOHDOKI_00260 2.5e-12 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
KHOHDOKI_00261 0.0 S Bacterial membrane protein, YfhO
KHOHDOKI_00262 2e-93 isaA GH23 M Immunodominant staphylococcal antigen A
KHOHDOKI_00263 3.1e-93 lytE M LysM domain protein
KHOHDOKI_00264 3.3e-98 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
KHOHDOKI_00265 7.1e-30 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
KHOHDOKI_00266 5.2e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
KHOHDOKI_00267 1.5e-152 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
KHOHDOKI_00268 1.2e-89 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
KHOHDOKI_00269 1.7e-138 ymfM S sequence-specific DNA binding
KHOHDOKI_00270 1.2e-91 ymfH S Peptidase M16
KHOHDOKI_00271 1e-99 ymfH S Peptidase M16
KHOHDOKI_00272 4.8e-235 ymfF S Peptidase M16
KHOHDOKI_00273 6.9e-44 yaaA S S4 domain protein YaaA
KHOHDOKI_00274 5.9e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
KHOHDOKI_00275 1.5e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
KHOHDOKI_00276 6.3e-193 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
KHOHDOKI_00277 4.2e-153 yvjA S membrane
KHOHDOKI_00278 6.7e-306 ybiT S abc transporter atp-binding protein
KHOHDOKI_00279 4.4e-101 XK27_10405 S Bacterial membrane protein YfhO
KHOHDOKI_00280 0.0 XK27_10405 S Bacterial membrane protein YfhO
KHOHDOKI_00284 6.2e-120 yoaK S Psort location CytoplasmicMembrane, score
KHOHDOKI_00285 8.6e-87 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
KHOHDOKI_00286 1.1e-196 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
KHOHDOKI_00287 7.7e-135 parB K Belongs to the ParB family
KHOHDOKI_00288 1.3e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
KHOHDOKI_00289 8.2e-202 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
KHOHDOKI_00290 2.7e-28 yyzM S Protein conserved in bacteria
KHOHDOKI_00291 8.6e-204 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
KHOHDOKI_00292 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
KHOHDOKI_00293 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
KHOHDOKI_00294 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
KHOHDOKI_00295 2.1e-61 divIC D Septum formation initiator
KHOHDOKI_00297 1.3e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
KHOHDOKI_00298 3.8e-240 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
KHOHDOKI_00299 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
KHOHDOKI_00300 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
KHOHDOKI_00301 1.6e-134 L Transposase
KHOHDOKI_00304 5.7e-95 ywlG S Belongs to the UPF0340 family
KHOHDOKI_00305 2.3e-87 treR K trehalose operon
KHOHDOKI_00306 5.8e-21 treR K DNA-binding transcription factor activity
KHOHDOKI_00307 2e-56 treB 2.7.1.201 G PTS System
KHOHDOKI_00308 7e-67 treC 3.2.1.93 GH13 G COG0366 Glycosidases
KHOHDOKI_00309 2.3e-120 treC 3.2.1.93 GH13 G COG0366 Glycosidases
KHOHDOKI_00310 0.0 pepO 3.4.24.71 O Peptidase family M13
KHOHDOKI_00311 5.1e-66 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
KHOHDOKI_00312 7.4e-103 1.1.1.1, 1.1.99.1, 1.2.1.10, 1.2.1.18, 1.2.1.27, 1.2.1.3 C Dehydrogenase
KHOHDOKI_00313 3.5e-76 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
KHOHDOKI_00314 8e-35 adhE 1.1.1.1, 1.2.1.10 C hydroxyacid-oxoacid transhydrogenase activity
KHOHDOKI_00315 1.4e-62 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
KHOHDOKI_00316 1.9e-278 thrC 4.2.3.1 E Threonine synthase
KHOHDOKI_00317 1.9e-226 norM V Mate efflux family protein
KHOHDOKI_00318 1.4e-57 asp S cog cog1302
KHOHDOKI_00319 1.7e-304 yloV S kinase related to dihydroxyacetone kinase
KHOHDOKI_00320 8.4e-09 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
KHOHDOKI_00321 6.8e-281 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
KHOHDOKI_00322 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
KHOHDOKI_00323 7.7e-77 ilvN 2.2.1.6 E Acetolactate synthase
KHOHDOKI_00324 1.2e-196 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
KHOHDOKI_00325 1.2e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
KHOHDOKI_00326 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
KHOHDOKI_00327 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KHOHDOKI_00328 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KHOHDOKI_00329 1e-68 S cog cog4699
KHOHDOKI_00330 7.9e-120 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
KHOHDOKI_00331 1.3e-196 cglB NU type II secretion system
KHOHDOKI_00332 8.5e-43 comGC U Required for transformation and DNA binding
KHOHDOKI_00333 1.8e-57 cglD NU Competence protein
KHOHDOKI_00334 1.4e-15 NU Type II secretory pathway pseudopilin
KHOHDOKI_00335 4e-72 comGF U Competence protein ComGF
KHOHDOKI_00336 6.8e-13 comGF U Putative Competence protein ComGF
KHOHDOKI_00337 5.9e-177 ytxK 2.1.1.72 L DNA methylase
KHOHDOKI_00338 2.6e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
KHOHDOKI_00339 8.8e-27 lanR K sequence-specific DNA binding
KHOHDOKI_00340 7.6e-68 V CAAX protease self-immunity
KHOHDOKI_00342 1.9e-110 S CAAX amino terminal protease family protein
KHOHDOKI_00343 3.9e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
KHOHDOKI_00344 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
KHOHDOKI_00345 7e-09 S Domain of unknown function (DUF4651)
KHOHDOKI_00346 4.2e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
KHOHDOKI_00347 7.9e-114 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
KHOHDOKI_00348 1.9e-189 yeeE S Sulphur transport
KHOHDOKI_00349 8.3e-37 yeeD O sulfur carrier activity
KHOHDOKI_00350 8.8e-13 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
KHOHDOKI_00351 1.4e-37 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
KHOHDOKI_00352 4.6e-91 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
KHOHDOKI_00354 2.4e-158 rrmA 2.1.1.187 Q methyltransferase
KHOHDOKI_00355 4e-65 S phosphatase activity
KHOHDOKI_00356 1.6e-42 S glycolate biosynthetic process
KHOHDOKI_00357 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
KHOHDOKI_00358 1e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
KHOHDOKI_00359 9.1e-95 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
KHOHDOKI_00360 2e-118 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
KHOHDOKI_00361 1.8e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
KHOHDOKI_00362 4.4e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
KHOHDOKI_00363 7.2e-64 XK27_08585 S Psort location CytoplasmicMembrane, score
KHOHDOKI_00364 2.9e-63 fnt P Formate nitrite transporter
KHOHDOKI_00365 1.1e-07 fnt P Formate nitrite transporter
KHOHDOKI_00366 1.9e-132 XK27_09615 S PAS domain
KHOHDOKI_00367 6.6e-34 XK27_09615 S FMN reductase (NADPH) activity
KHOHDOKI_00368 8.3e-34 XK27_09620 S FMN reductase (NADPH) activity
KHOHDOKI_00369 4.1e-65 XK27_09620 S FMN reductase (NADPH) activity
KHOHDOKI_00370 1.1e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
KHOHDOKI_00371 8.1e-71 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
KHOHDOKI_00372 3.5e-129 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
KHOHDOKI_00373 8.1e-12 WQ51_05710 S Mitochondrial biogenesis AIM24
KHOHDOKI_00374 1.4e-36 WQ51_05710 S Mitochondrial biogenesis AIM24
KHOHDOKI_00375 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
KHOHDOKI_00376 9.2e-51 S Protein of unknown function (DUF3397)
KHOHDOKI_00377 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
KHOHDOKI_00378 4.8e-120 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
KHOHDOKI_00379 4.9e-75 amiA E transmembrane transport
KHOHDOKI_00380 1.4e-81 amiA E transmembrane transport
KHOHDOKI_00381 2.3e-165 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
KHOHDOKI_00382 2.1e-82 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
KHOHDOKI_00383 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
KHOHDOKI_00384 1.9e-264 argH 4.3.2.1 E Argininosuccinate lyase
KHOHDOKI_00385 1.2e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
KHOHDOKI_00386 7.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
KHOHDOKI_00387 1.9e-184 jag S RNA-binding protein
KHOHDOKI_00388 1e-13 rpmH J Ribosomal protein L34
KHOHDOKI_00389 4.8e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
KHOHDOKI_00390 4.1e-33 L Integrase core domain protein
KHOHDOKI_00391 4.7e-230 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
KHOHDOKI_00392 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
KHOHDOKI_00393 4.6e-238 dltB M Membrane protein involved in D-alanine export
KHOHDOKI_00394 4.9e-298 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
KHOHDOKI_00395 1.7e-09 S D-Ala-teichoic acid biosynthesis protein
KHOHDOKI_00396 0.0 XK27_10035 V abc transporter atp-binding protein
KHOHDOKI_00397 0.0 yfiB1 V abc transporter atp-binding protein
KHOHDOKI_00398 2.4e-107 pvaA M lytic transglycosylase activity
KHOHDOKI_00399 1.9e-178 ndpA S 37-kD nucleoid-associated bacterial protein
KHOHDOKI_00400 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
KHOHDOKI_00401 1.1e-107 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
KHOHDOKI_00402 4e-153 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
KHOHDOKI_00403 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
KHOHDOKI_00404 4.5e-111 tdk 2.7.1.21 F thymidine kinase
KHOHDOKI_00405 4.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
KHOHDOKI_00406 2e-154 gst O Glutathione S-transferase
KHOHDOKI_00407 1.5e-177 nrnA 3.1.13.3, 3.1.3.7 S domain protein
KHOHDOKI_00408 1.5e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
KHOHDOKI_00409 2e-45 rpmE2 J 50S ribosomal protein L31
KHOHDOKI_00410 1e-229 mntH P Mn2 and Fe2 transporters of the NRAMP family
KHOHDOKI_00411 8.4e-10
KHOHDOKI_00412 1.2e-17
KHOHDOKI_00413 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
KHOHDOKI_00414 1.4e-12 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
KHOHDOKI_00415 7.9e-136 divIVA D Cell division protein DivIVA
KHOHDOKI_00416 7.2e-144 ylmH T S4 RNA-binding domain
KHOHDOKI_00417 8.8e-35 yggT D integral membrane protein
KHOHDOKI_00418 2.3e-96 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
KHOHDOKI_00419 2.7e-123 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
KHOHDOKI_00420 5.4e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
KHOHDOKI_00421 8e-252 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
KHOHDOKI_00422 2.2e-178 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
KHOHDOKI_00423 1e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
KHOHDOKI_00424 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
KHOHDOKI_00426 0.0 typA T GTP-binding protein TypA
KHOHDOKI_00427 2.2e-179 glk 2.7.1.2 G Glucokinase
KHOHDOKI_00428 8.4e-28 yqgQ S protein conserved in bacteria
KHOHDOKI_00429 1.1e-80 perR P Belongs to the Fur family
KHOHDOKI_00430 1.6e-91 dps P Belongs to the Dps family
KHOHDOKI_00431 3e-116 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
KHOHDOKI_00432 1.4e-190 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
KHOHDOKI_00433 8.5e-113 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
KHOHDOKI_00434 7.1e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
KHOHDOKI_00435 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
KHOHDOKI_00436 6.2e-56 S Domain of unknown function (DUF4430)
KHOHDOKI_00437 4.2e-75 S Psort location CytoplasmicMembrane, score
KHOHDOKI_00438 6.4e-133 htpX O Belongs to the peptidase M48B family
KHOHDOKI_00439 1.5e-92 lemA S LemA family
KHOHDOKI_00440 9e-176 spd F DNA RNA non-specific endonuclease
KHOHDOKI_00441 1.8e-90 higA K Pfam:DUF955
KHOHDOKI_00442 2.1e-97
KHOHDOKI_00443 1.7e-06 S Domain of unknown function (DUF4868)
KHOHDOKI_00444 2.2e-133 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
KHOHDOKI_00445 2.3e-274 hsdM 2.1.1.72 V type I restriction-modification system
KHOHDOKI_00446 5.3e-37 hsdR 3.1.21.3 L Type I site-specific deoxyribonuclease, HsdR family
KHOHDOKI_00447 2.4e-178 hsdR 3.1.21.3 L Type I restriction enzyme R protein N terminus (HSDR_N)
KHOHDOKI_00448 2.6e-235 hsdR 3.1.21.3 L Type I site-specific deoxyribonuclease, HsdR family
KHOHDOKI_00449 6.2e-97 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
KHOHDOKI_00450 8.6e-19 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
KHOHDOKI_00451 1.4e-23 MA20_36090 S Protein of unknown function (DUF2974)
KHOHDOKI_00452 6.1e-114 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
KHOHDOKI_00453 1.2e-27 P Hemerythrin HHE cation binding domain protein
KHOHDOKI_00454 1.6e-145 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
KHOHDOKI_00455 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
KHOHDOKI_00456 5.1e-116 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
KHOHDOKI_00457 2.3e-175 S hydrolase
KHOHDOKI_00458 3.4e-16
KHOHDOKI_00459 3.1e-61 M LysM domain
KHOHDOKI_00460 3.5e-52 M LysM domain
KHOHDOKI_00461 3.4e-22 M LysM domain
KHOHDOKI_00462 2.2e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
KHOHDOKI_00463 2.5e-22 L Transposase
KHOHDOKI_00464 1.9e-46 L transposase activity
KHOHDOKI_00465 4.2e-20 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
KHOHDOKI_00466 7.2e-215 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
KHOHDOKI_00467 4.3e-27 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
KHOHDOKI_00468 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
KHOHDOKI_00469 5.2e-142 cmpC S abc transporter atp-binding protein
KHOHDOKI_00470 0.0 WQ51_06230 S ABC transporter substrate binding protein
KHOHDOKI_00471 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
KHOHDOKI_00472 1.2e-230 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
KHOHDOKI_00473 1.7e-145 cdsA 2.7.7.41 S Belongs to the CDS family
KHOHDOKI_00474 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
KHOHDOKI_00475 9.8e-50 yajC U protein transport
KHOHDOKI_00476 1.9e-127 yeeN K transcriptional regulatory protein
KHOHDOKI_00477 2.8e-257 pgi 5.3.1.9 G Belongs to the GPI family
KHOHDOKI_00478 4.1e-32 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
KHOHDOKI_00479 1.3e-72 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
KHOHDOKI_00480 8.5e-108 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
KHOHDOKI_00481 1.4e-154 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G pts system
KHOHDOKI_00482 9.2e-25 ptsG 2.7.1.199, 2.7.1.208 G pts system
KHOHDOKI_00483 2.3e-51 ptsG 2.7.1.199, 2.7.1.208 G pts system
KHOHDOKI_00484 2.1e-163 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
KHOHDOKI_00485 2.8e-127 adcB P ABC transporter (Permease
KHOHDOKI_00486 6.4e-136 adcC P ABC transporter, ATP-binding protein
KHOHDOKI_00487 3.1e-72 adcR K transcriptional
KHOHDOKI_00488 1.9e-223 EGP Major facilitator Superfamily
KHOHDOKI_00489 0.0 KLT serine threonine protein kinase
KHOHDOKI_00490 6e-128 K sequence-specific DNA binding
KHOHDOKI_00491 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
KHOHDOKI_00492 4.3e-158 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
KHOHDOKI_00493 2.9e-07
KHOHDOKI_00494 8.7e-165 oppF P Belongs to the ABC transporter superfamily
KHOHDOKI_00495 1.3e-44 oppD P Belongs to the ABC transporter superfamily
KHOHDOKI_00496 3.3e-68 oppD P Belongs to the ABC transporter superfamily
KHOHDOKI_00497 2.5e-32 oppD P Belongs to the ABC transporter superfamily
KHOHDOKI_00498 3e-27 oppD P Belongs to the ABC transporter superfamily
KHOHDOKI_00499 9.8e-40 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
KHOHDOKI_00500 2.7e-45 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
KHOHDOKI_00501 6.6e-11 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
KHOHDOKI_00502 1.9e-27 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
KHOHDOKI_00503 9.7e-138 oppA E ABC transporter substrate-binding protein
KHOHDOKI_00504 2.4e-19 oppA E ABC transporter substrate-binding protein
KHOHDOKI_00505 2.2e-273 sufB O assembly protein SufB
KHOHDOKI_00506 1.1e-74 nifU C SUF system FeS assembly protein, NifU family
KHOHDOKI_00507 1.5e-236 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
KHOHDOKI_00508 1.4e-234 sufD O assembly protein SufD
KHOHDOKI_00509 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
KHOHDOKI_00510 3.8e-186 tagO 2.7.8.33, 2.7.8.35 M transferase
KHOHDOKI_00511 1.4e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
KHOHDOKI_00512 3.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
KHOHDOKI_00513 1.5e-275 glnP P ABC transporter
KHOHDOKI_00514 1.7e-123 glnQ E abc transporter atp-binding protein
KHOHDOKI_00517 5e-94 V VanZ like family
KHOHDOKI_00518 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
KHOHDOKI_00519 9.3e-201 yhjX P Major Facilitator
KHOHDOKI_00520 1.2e-112 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
KHOHDOKI_00521 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
KHOHDOKI_00522 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
KHOHDOKI_00523 2.5e-48 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
KHOHDOKI_00524 1.6e-64 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
KHOHDOKI_00525 4e-28 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
KHOHDOKI_00526 1.4e-09 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
KHOHDOKI_00527 2.3e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
KHOHDOKI_00528 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
KHOHDOKI_00529 1.8e-83 nrdI F Belongs to the NrdI family
KHOHDOKI_00530 1.9e-19 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
KHOHDOKI_00531 1.3e-154 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
KHOHDOKI_00532 9.1e-139 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
KHOHDOKI_00533 1.2e-29 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
KHOHDOKI_00534 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
KHOHDOKI_00535 1.8e-178 prmA J Ribosomal protein L11 methyltransferase
KHOHDOKI_00536 1e-56 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
KHOHDOKI_00537 2.4e-83 XK27_03960 S Protein of unknown function (DUF3013)
KHOHDOKI_00538 2.2e-309 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
KHOHDOKI_00539 6.3e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
KHOHDOKI_00540 4.9e-219 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
KHOHDOKI_00541 1.6e-149 ykuT M mechanosensitive ion channel
KHOHDOKI_00542 1.6e-77 sigH K DNA-templated transcription, initiation
KHOHDOKI_00543 1.2e-97 lepB 3.4.21.89 U Belongs to the peptidase S26 family
KHOHDOKI_00544 4.9e-224 G COG0457 FOG TPR repeat
KHOHDOKI_00545 6.2e-176 yubA S permease
KHOHDOKI_00546 3.5e-93 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
KHOHDOKI_00547 3.6e-163 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
KHOHDOKI_00548 3.2e-124 ftsE D cell division ATP-binding protein FtsE
KHOHDOKI_00549 7.4e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
KHOHDOKI_00550 2.7e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
KHOHDOKI_00551 5.1e-181 yjjH S Calcineurin-like phosphoesterase
KHOHDOKI_00552 6.7e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
KHOHDOKI_00553 0.0 pacL 3.6.3.8 P cation transport ATPase
KHOHDOKI_00554 2.6e-67 ywiB S Domain of unknown function (DUF1934)
KHOHDOKI_00555 1.7e-51 XK27_00115 2.3.1.128 K acetyltransferase
KHOHDOKI_00556 3.5e-146 yidA S hydrolases of the HAD superfamily
KHOHDOKI_00557 2e-230 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
KHOHDOKI_00558 2.1e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
KHOHDOKI_00559 3.9e-235 vicK 2.7.13.3 T Histidine kinase
KHOHDOKI_00560 9.1e-98 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
KHOHDOKI_00561 1.1e-16 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
KHOHDOKI_00562 4.6e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
KHOHDOKI_00563 3.1e-150 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
KHOHDOKI_00564 2.7e-118 gltJ P ABC transporter (Permease
KHOHDOKI_00565 1.7e-111 tcyB_2 P ABC transporter (permease)
KHOHDOKI_00566 2e-142 endA F DNA RNA non-specific endonuclease
KHOHDOKI_00567 1.6e-25 epuA S DNA-directed RNA polymerase subunit beta
KHOHDOKI_00568 1.7e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
KHOHDOKI_00570 2.3e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
KHOHDOKI_00571 7e-27 G Domain of unknown function (DUF4832)
KHOHDOKI_00572 1.3e-202 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
KHOHDOKI_00573 1.6e-174 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
KHOHDOKI_00574 7.8e-261 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
KHOHDOKI_00575 2.5e-23 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
KHOHDOKI_00576 2.1e-88 ytsP 1.8.4.14 T GAF domain-containing protein
KHOHDOKI_00577 6.4e-165 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
KHOHDOKI_00578 2.1e-19 WQ51_02665 S Protein of unknown function (DUF3042)
KHOHDOKI_00581 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
KHOHDOKI_00582 1.4e-218 XK27_05110 P chloride
KHOHDOKI_00583 8.7e-41 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
KHOHDOKI_00584 1.1e-281 clcA P Chloride transporter, ClC family
KHOHDOKI_00585 5.1e-75 fld C Flavodoxin
KHOHDOKI_00586 2.5e-14 XK27_08880
KHOHDOKI_00587 1e-125 XK27_08875 O Zinc-dependent metalloprotease
KHOHDOKI_00588 3.5e-151 estA CE1 S Putative esterase
KHOHDOKI_00589 1e-309 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
KHOHDOKI_00590 5.8e-135 XK27_08845 S abc transporter atp-binding protein
KHOHDOKI_00591 5.2e-148 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
KHOHDOKI_00592 7.3e-178 XK27_08835 S ABC transporter substrate binding protein
KHOHDOKI_00593 3.2e-17 S Domain of unknown function (DUF4649)
KHOHDOKI_00595 9.6e-43 Q the current gene model (or a revised gene model) may contain a frame shift
KHOHDOKI_00596 5.4e-27 Q the current gene model (or a revised gene model) may contain a frame shift
KHOHDOKI_00598 3.2e-09 Q the current gene model (or a revised gene model) may contain a frame shift
KHOHDOKI_00600 1.3e-276 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
KHOHDOKI_00601 1.2e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
KHOHDOKI_00602 0.0 dnaE 2.7.7.7 L DNA polymerase
KHOHDOKI_00603 2.2e-19 dnaE 2.7.7.7 L DNA polymerase
KHOHDOKI_00604 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
KHOHDOKI_00605 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
KHOHDOKI_00606 8.9e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
KHOHDOKI_00607 1.1e-41 ysdA L Membrane
KHOHDOKI_00608 6.6e-190 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
KHOHDOKI_00609 7.6e-291 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
KHOHDOKI_00610 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
KHOHDOKI_00611 1.9e-13
KHOHDOKI_00612 1.5e-124 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
KHOHDOKI_00613 7.4e-35 yozE S Belongs to the UPF0346 family
KHOHDOKI_00614 5.3e-161 cvfB S Protein conserved in bacteria
KHOHDOKI_00615 9.9e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
KHOHDOKI_00616 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
KHOHDOKI_00617 2.3e-122 sptS 2.7.13.3 T Histidine kinase
KHOHDOKI_00618 0.0 lmrA2 V abc transporter atp-binding protein
KHOHDOKI_00619 8.8e-224 lmrA1 V abc transporter atp-binding protein
KHOHDOKI_00620 9.9e-78 lmrA1 V abc transporter atp-binding protein
KHOHDOKI_00621 1.9e-77 K DNA-binding transcription factor activity
KHOHDOKI_00622 7.9e-70 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
KHOHDOKI_00623 1.8e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
KHOHDOKI_00624 2.2e-215 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
KHOHDOKI_00625 1.4e-136 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
KHOHDOKI_00626 1.6e-24 U response to pH
KHOHDOKI_00627 0.0 yfmR S abc transporter atp-binding protein
KHOHDOKI_00628 1.5e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
KHOHDOKI_00629 5.1e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
KHOHDOKI_00630 3.4e-109 XK27_08360 T EDD domain protein, DegV family
KHOHDOKI_00631 2.9e-31 XK27_08360 S lipid binding
KHOHDOKI_00632 2.6e-64 WQ51_03320 S cog cog4835
KHOHDOKI_00633 1.3e-37 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
KHOHDOKI_00634 2.1e-99 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
KHOHDOKI_00635 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
KHOHDOKI_00636 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
KHOHDOKI_00637 6.4e-29 2.3.1.128 K acetyltransferase
KHOHDOKI_00638 1.1e-38 2.3.1.128 K acetyltransferase
KHOHDOKI_00639 8e-257 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
KHOHDOKI_00640 3.4e-266 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
KHOHDOKI_00641 7.2e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
KHOHDOKI_00642 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
KHOHDOKI_00645 5.3e-242 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
KHOHDOKI_00646 1.4e-261 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
KHOHDOKI_00647 1.5e-47 fruA 2.7.1.202 G phosphotransferase system
KHOHDOKI_00648 2.2e-104 fruA 2.7.1.202 G phosphotransferase system
KHOHDOKI_00649 1.4e-25 fruA 2.7.1.202 G phosphotransferase system
KHOHDOKI_00650 1.7e-21 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
KHOHDOKI_00651 7.3e-12 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
KHOHDOKI_00652 9.6e-53 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
KHOHDOKI_00653 6.5e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
KHOHDOKI_00654 5.6e-114 fruR K transcriptional
KHOHDOKI_00655 4.7e-85 L Transposase
KHOHDOKI_00656 9.2e-207 rny D Endoribonuclease that initiates mRNA decay
KHOHDOKI_00657 1.8e-127 tnp L Transposase
KHOHDOKI_00658 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
KHOHDOKI_00659 1e-24 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
KHOHDOKI_00660 5e-94 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
KHOHDOKI_00661 1.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
KHOHDOKI_00662 1.7e-257 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
KHOHDOKI_00663 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
KHOHDOKI_00664 1.1e-54 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
KHOHDOKI_00665 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
KHOHDOKI_00666 1.3e-126 IQ reductase
KHOHDOKI_00667 8.5e-165 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
KHOHDOKI_00668 6.8e-173 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
KHOHDOKI_00669 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
KHOHDOKI_00670 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
KHOHDOKI_00671 8.9e-72 marR K Transcriptional regulator, MarR family
KHOHDOKI_00672 2.4e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
KHOHDOKI_00673 1.9e-115 S Haloacid dehalogenase-like hydrolase
KHOHDOKI_00674 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
KHOHDOKI_00675 8e-193 asnA 6.3.1.1 E aspartate--ammonia ligase
KHOHDOKI_00676 5.2e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
KHOHDOKI_00677 7.3e-133 recX 2.4.1.337 GT4 S Regulatory protein RecX
KHOHDOKI_00678 7.8e-102 ygaC J Belongs to the UPF0374 family
KHOHDOKI_00679 7.9e-107 S Domain of unknown function (DUF1803)
KHOHDOKI_00680 3.5e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
KHOHDOKI_00687 2.2e-106 nylA 3.5.1.4 J Belongs to the amidase family
KHOHDOKI_00688 4.6e-73 yckB ET Belongs to the bacterial solute-binding protein 3 family
KHOHDOKI_00689 3.2e-59 artJ_1 ET Belongs to the bacterial solute-binding protein 3 family
KHOHDOKI_00690 3.3e-68 yecS P ABC transporter (Permease
KHOHDOKI_00691 9.2e-22 yecS P amino acid transport
KHOHDOKI_00693 1.5e-280 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
KHOHDOKI_00694 1.9e-38 3.1.3.6, 3.1.4.16 F nucleotide catabolic process
KHOHDOKI_00695 5.9e-103 yfiF3 K sequence-specific DNA binding
KHOHDOKI_00696 1e-22 bglC K Transcriptional regulator
KHOHDOKI_00697 1.6e-247 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
KHOHDOKI_00698 4e-240 agcS E (Alanine) symporter
KHOHDOKI_00699 2.8e-213 pcrA 3.6.4.12 L ATP-dependent DNA helicase
KHOHDOKI_00700 2.3e-188 pcrA 3.6.4.12 L ATP-dependent DNA helicase
KHOHDOKI_00701 3.5e-241 metY 2.5.1.49 E o-acetylhomoserine
KHOHDOKI_00702 1.8e-59 Q phosphatase activity
KHOHDOKI_00703 9.3e-62 S haloacid dehalogenase-like hydrolase
KHOHDOKI_00704 3.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
KHOHDOKI_00705 1.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
KHOHDOKI_00706 9e-213 XK27_04775 S hemerythrin HHE cation binding domain
KHOHDOKI_00707 4.2e-150 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
KHOHDOKI_00708 1.7e-173 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
KHOHDOKI_00709 1.4e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
KHOHDOKI_00710 2.3e-44 yktA S Belongs to the UPF0223 family
KHOHDOKI_00711 6.5e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
KHOHDOKI_00712 1.5e-255 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
KHOHDOKI_00713 5.6e-158 pstS P phosphate
KHOHDOKI_00714 2.5e-156 pstC P probably responsible for the translocation of the substrate across the membrane
KHOHDOKI_00715 1.2e-155 pstA P phosphate transport system permease
KHOHDOKI_00716 1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
KHOHDOKI_00717 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
KHOHDOKI_00718 2.4e-113 phoU P Plays a role in the regulation of phosphate uptake
KHOHDOKI_00719 0.0 pepN 3.4.11.2 E aminopeptidase
KHOHDOKI_00720 7e-195 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
KHOHDOKI_00722 1.3e-187 lplA 6.3.1.20 H Lipoate-protein ligase
KHOHDOKI_00723 1.2e-07
KHOHDOKI_00724 3.2e-08
KHOHDOKI_00725 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
KHOHDOKI_00726 2.4e-74 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
KHOHDOKI_00727 1.2e-186 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
KHOHDOKI_00728 8.1e-177 malR K Transcriptional regulator
KHOHDOKI_00729 3.2e-17 malX G ABC transporter
KHOHDOKI_00730 3.8e-12 malX G maltose binding
KHOHDOKI_00731 2.3e-27 malX G maltose binding
KHOHDOKI_00732 1.2e-45 malF P ABC transporter (Permease
KHOHDOKI_00733 1.3e-46 malF P ABC transporter (Permease
KHOHDOKI_00734 4.6e-25 tatA U protein secretion
KHOHDOKI_00735 2e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
KHOHDOKI_00736 2.9e-304 ywbL P COG0672 High-affinity Fe2 Pb2 permease
KHOHDOKI_00737 1.5e-233 ycdB P peroxidase
KHOHDOKI_00738 4.6e-152 ycdO P periplasmic lipoprotein involved in iron transport
KHOHDOKI_00739 2.6e-178 fatB P ABC-type enterochelin transport system, periplasmic component
KHOHDOKI_00740 6.8e-136 yclP 3.6.3.34 P abc transporter atp-binding protein
KHOHDOKI_00741 1.5e-167 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
KHOHDOKI_00742 1.8e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
KHOHDOKI_00743 5.5e-36 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
KHOHDOKI_00744 3.1e-223 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
KHOHDOKI_00745 6.1e-57 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
KHOHDOKI_00746 1.7e-63 hsdM 2.1.1.72 V type I restriction-modification system
KHOHDOKI_00747 1.5e-33 hsdM 2.1.1.72 V type I restriction-modification system
KHOHDOKI_00748 2.2e-157 glcU U Glucose uptake
KHOHDOKI_00749 1.1e-08 mycA 4.2.1.53 S Myosin-crossreactive antigen
KHOHDOKI_00750 2.9e-78 hsdM 2.1.1.72 V HsdM N-terminal domain
KHOHDOKI_00751 1.9e-57 XK27_10720 D peptidase activity
KHOHDOKI_00752 2.3e-295 adcA P Belongs to the bacterial solute-binding protein 9 family
KHOHDOKI_00753 1.7e-08
KHOHDOKI_00755 1.4e-109 L Transposase
KHOHDOKI_00756 2.5e-46
KHOHDOKI_00757 7.1e-17
KHOHDOKI_00758 1e-171 yeiH S Membrane
KHOHDOKI_00759 7.1e-114 mur1 NU muramidase
KHOHDOKI_00760 1.2e-97 L transposition
KHOHDOKI_00761 2.6e-166 cpsY K Transcriptional regulator
KHOHDOKI_00762 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
KHOHDOKI_00763 5.6e-58 phnA P Alkylphosphonate utilization operon protein PhnA
KHOHDOKI_00764 6e-49 artQ P ABC transporter (Permease
KHOHDOKI_00765 1.8e-113 glnQ 3.6.3.21 E abc transporter atp-binding protein
KHOHDOKI_00766 8.4e-159 aatB ET ABC transporter substrate-binding protein
KHOHDOKI_00767 5.8e-149 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
KHOHDOKI_00768 2.1e-07
KHOHDOKI_00769 7.8e-25
KHOHDOKI_00770 4.6e-63 adhP 1.1.1.1 C alcohol dehydrogenase
KHOHDOKI_00771 1.8e-15 adhP 1.1.1.1 P alcohol dehydrogenase
KHOHDOKI_00772 2.4e-81 adhP 1.1.1.1 C alcohol dehydrogenase
KHOHDOKI_00773 2.7e-22
KHOHDOKI_00774 0.0 res_1 3.1.21.5 S Type III restriction
KHOHDOKI_00775 1.2e-263 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
KHOHDOKI_00776 8.8e-93 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
KHOHDOKI_00777 1.3e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
KHOHDOKI_00778 1.3e-125 gntR1 K transcriptional
KHOHDOKI_00779 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
KHOHDOKI_00780 5.9e-275 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
KHOHDOKI_00781 3.1e-87 niaX
KHOHDOKI_00782 6e-91 niaR S small molecule binding protein (contains 3H domain)
KHOHDOKI_00783 7.3e-72 K DNA-binding helix-turn-helix protein
KHOHDOKI_00784 1.6e-41 K DNA-binding helix-turn-helix protein
KHOHDOKI_00785 1.1e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
KHOHDOKI_00786 2.4e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
KHOHDOKI_00787 3.7e-168 GK ROK family
KHOHDOKI_00788 2.4e-158 dprA LU DNA protecting protein DprA
KHOHDOKI_00789 1.4e-65 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
KHOHDOKI_00790 5.1e-57 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
KHOHDOKI_00791 1.8e-240 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
KHOHDOKI_00792 6.7e-153 S TraX protein
KHOHDOKI_00793 2.2e-122 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
KHOHDOKI_00794 2.8e-252 T PhoQ Sensor
KHOHDOKI_00795 2.5e-258 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
KHOHDOKI_00796 2e-154 XK27_05470 E Methionine synthase
KHOHDOKI_00797 2.2e-23 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
KHOHDOKI_00798 4.4e-35 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
KHOHDOKI_00799 7.3e-46 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
KHOHDOKI_00800 2.9e-92 ET Bacterial periplasmic substrate-binding proteins
KHOHDOKI_00801 6.6e-54 IQ Acetoin reductase
KHOHDOKI_00802 3.9e-19 IQ Acetoin reductase
KHOHDOKI_00803 4.7e-239 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
KHOHDOKI_00804 1.7e-70 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
KHOHDOKI_00808 1.1e-53 K peptidyl-tyrosine sulfation
KHOHDOKI_00809 1.6e-131 cbiO P ABC transporter
KHOHDOKI_00810 4.9e-137 P cobalt transport protein
KHOHDOKI_00811 3.5e-177 cbiM P PDGLE domain
KHOHDOKI_00812 5.8e-160 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
KHOHDOKI_00813 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
KHOHDOKI_00814 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
KHOHDOKI_00815 4.3e-77 ureE O enzyme active site formation
KHOHDOKI_00816 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
KHOHDOKI_00817 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
KHOHDOKI_00818 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
KHOHDOKI_00819 7.5e-94 ureI S AmiS/UreI family transporter
KHOHDOKI_00820 1.6e-53 S Domain of unknown function (DUF4173)
KHOHDOKI_00821 2.6e-35 S Domain of unknown function (DUF4173)
KHOHDOKI_00822 1.6e-43 yhaI L Membrane
KHOHDOKI_00823 1.4e-69 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
KHOHDOKI_00824 3.6e-62 comA V protein secretion by the type I secretion system
KHOHDOKI_00825 6.9e-34 V protein secretion by the type I secretion system
KHOHDOKI_00826 1.6e-109 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
KHOHDOKI_00827 1.9e-33 V protein secretion by the type I secretion system
KHOHDOKI_00828 7.3e-161 K sequence-specific DNA binding
KHOHDOKI_00829 7e-113 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
KHOHDOKI_00830 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
KHOHDOKI_00831 2.5e-79 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
KHOHDOKI_00832 1.8e-248 trkA P Potassium transporter peripheral membrane component
KHOHDOKI_00833 1.2e-258 trkH P Cation transport protein
KHOHDOKI_00834 8.6e-43 yidD S Could be involved in insertion of integral membrane proteins into the membrane
KHOHDOKI_00835 1.6e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
KHOHDOKI_00836 2.3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
KHOHDOKI_00837 3.1e-122 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
KHOHDOKI_00838 3.3e-138 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
KHOHDOKI_00839 5.4e-86 ykuL S CBS domain
KHOHDOKI_00840 3.5e-99 XK27_09740 S Phosphoesterase
KHOHDOKI_00841 7.1e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
KHOHDOKI_00842 1.3e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
KHOHDOKI_00843 7.6e-36 yneF S UPF0154 protein
KHOHDOKI_00844 9.6e-92 K transcriptional regulator
KHOHDOKI_00845 9.6e-244 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
KHOHDOKI_00848 8.8e-98 ybhL S Belongs to the BI1 family
KHOHDOKI_00849 6.1e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
KHOHDOKI_00850 6.4e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
KHOHDOKI_00851 2.7e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
KHOHDOKI_00852 2.9e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
KHOHDOKI_00853 4.3e-83 L Integrase core domain protein
KHOHDOKI_00854 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
KHOHDOKI_00855 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
KHOHDOKI_00856 4.6e-58 XK27_09675 K -acetyltransferase
KHOHDOKI_00857 1.5e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
KHOHDOKI_00858 2.5e-23
KHOHDOKI_00859 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
KHOHDOKI_00860 9.4e-95 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
KHOHDOKI_00861 3.4e-123 comFC S Competence protein
KHOHDOKI_00862 2.7e-252 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
KHOHDOKI_00863 1.4e-110 yvyE 3.4.13.9 S YigZ family
KHOHDOKI_00864 2.8e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
KHOHDOKI_00865 3.3e-43 acuB S IMP dehydrogenase activity
KHOHDOKI_00866 9.5e-71 acuB S IMP dehydrogenase activity
KHOHDOKI_00867 2.1e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
KHOHDOKI_00868 8.2e-137 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
KHOHDOKI_00869 1.4e-138 livM E Belongs to the binding-protein-dependent transport system permease family
KHOHDOKI_00870 1.9e-145 livH E Belongs to the binding-protein-dependent transport system permease family
KHOHDOKI_00871 1.1e-212 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
KHOHDOKI_00872 7.1e-46 ylbG S UPF0298 protein
KHOHDOKI_00873 1.2e-74 ylbF S Belongs to the UPF0342 family
KHOHDOKI_00874 1.4e-104 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
KHOHDOKI_00875 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
KHOHDOKI_00878 1e-223 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
KHOHDOKI_00879 4.7e-202 metB 2.5.1.48, 4.4.1.8 E cystathionine
KHOHDOKI_00880 1e-87 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
KHOHDOKI_00881 4.5e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
KHOHDOKI_00882 2.9e-276 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
KHOHDOKI_00883 1.4e-234 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
KHOHDOKI_00885 4e-38 yvdD 3.2.2.10 L Belongs to the LOG family
KHOHDOKI_00886 2e-22 yvdD 3.2.2.10 S Belongs to the LOG family
KHOHDOKI_00887 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
KHOHDOKI_00888 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
KHOHDOKI_00889 1.4e-41 ylxQ J ribosomal protein
KHOHDOKI_00890 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
KHOHDOKI_00891 4.1e-212 nusA K Participates in both transcription termination and antitermination
KHOHDOKI_00892 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
KHOHDOKI_00893 2.5e-220 brpA K Transcriptional
KHOHDOKI_00894 3.2e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
KHOHDOKI_00895 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
KHOHDOKI_00896 7.6e-164 pbuO S permease
KHOHDOKI_00897 1.4e-72 pbuO S permease
KHOHDOKI_00898 1.1e-148 yitU 3.1.3.104 S hydrolases of the HAD superfamily
KHOHDOKI_00899 1.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
KHOHDOKI_00900 9.8e-183 manL 2.7.1.191 G pts system
KHOHDOKI_00901 2.7e-117 manM G pts system
KHOHDOKI_00902 1.1e-169 manN G PTS system mannose fructose sorbose family IID component
KHOHDOKI_00903 5e-63 manO S protein conserved in bacteria
KHOHDOKI_00904 4.6e-233 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
KHOHDOKI_00905 9.8e-25 S Protein of unknown function DUF262
KHOHDOKI_00906 7.2e-184 S CRISPR-associated protein Csn2 subfamily St
KHOHDOKI_00907 3.1e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
KHOHDOKI_00908 3.2e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
KHOHDOKI_00909 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
KHOHDOKI_00910 1.8e-94
KHOHDOKI_00911 2.4e-28 estA E GDSL-like Lipase/Acylhydrolase
KHOHDOKI_00912 7.8e-50 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
KHOHDOKI_00913 1e-31 K Cro/C1-type HTH DNA-binding domain
KHOHDOKI_00914 1.6e-84
KHOHDOKI_00915 5.9e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
KHOHDOKI_00916 7.7e-97 mip S hydroperoxide reductase activity
KHOHDOKI_00917 4.8e-204 I acyl-CoA dehydrogenase
KHOHDOKI_00918 2.9e-160 ydiA P C4-dicarboxylate transporter malic acid transport
KHOHDOKI_00919 4e-108 msrR K Transcriptional regulator
KHOHDOKI_00920 1.1e-59 msrR K Transcriptional regulator
KHOHDOKI_00921 2.3e-153 pheA 4.2.1.51 E Prephenate dehydratase
KHOHDOKI_00922 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
KHOHDOKI_00923 1.7e-235 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
KHOHDOKI_00924 1.1e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
KHOHDOKI_00925 3.2e-53 yheA S Belongs to the UPF0342 family
KHOHDOKI_00926 1.1e-206 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
KHOHDOKI_00927 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
KHOHDOKI_00928 4.5e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
KHOHDOKI_00929 3.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
KHOHDOKI_00930 2.9e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
KHOHDOKI_00931 6.9e-220 ywbD 2.1.1.191 J Methyltransferase
KHOHDOKI_00932 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
KHOHDOKI_00933 1.3e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
KHOHDOKI_00934 1.3e-78 yueI S Protein of unknown function (DUF1694)
KHOHDOKI_00935 1.1e-206 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
KHOHDOKI_00936 7.4e-146 yyaQ S YjbR
KHOHDOKI_00937 4e-27 yyaQ S YjbR
KHOHDOKI_00938 4.4e-183 ccpA K Catabolite control protein A
KHOHDOKI_00939 4.2e-211 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
KHOHDOKI_00940 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
KHOHDOKI_00941 3.7e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
KHOHDOKI_00942 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
KHOHDOKI_00943 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
KHOHDOKI_00944 2e-33 secG U Preprotein translocase subunit SecG
KHOHDOKI_00945 2.9e-221 mdtG EGP Major facilitator Superfamily
KHOHDOKI_00946 1.1e-104 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
KHOHDOKI_00947 5.5e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
KHOHDOKI_00948 2.2e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
KHOHDOKI_00949 1.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
KHOHDOKI_00950 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
KHOHDOKI_00951 3.4e-52 licT K transcriptional antiterminator
KHOHDOKI_00952 5.8e-64 licT K transcriptional antiterminator
KHOHDOKI_00953 2.2e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
KHOHDOKI_00954 9.5e-124 pbp2b 3.4.16.4 M penicillin-binding protein
KHOHDOKI_00955 6e-187 pbp2b 3.4.16.4 M penicillin-binding protein
KHOHDOKI_00956 2e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
KHOHDOKI_00957 1e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
KHOHDOKI_00958 7.5e-23 I Alpha/beta hydrolase family
KHOHDOKI_00959 1.5e-35 yugF I carboxylic ester hydrolase activity
KHOHDOKI_00960 6.6e-08
KHOHDOKI_00961 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
KHOHDOKI_00962 4.1e-78 feoA P FeoA domain protein
KHOHDOKI_00963 1.1e-130 glnQ 3.6.3.21 E abc transporter atp-binding protein
KHOHDOKI_00964 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
KHOHDOKI_00965 1.3e-34 ykuJ S protein conserved in bacteria
KHOHDOKI_00966 1.6e-182 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
KHOHDOKI_00967 6.1e-218 clpE O Belongs to the ClpA ClpB family
KHOHDOKI_00968 2e-135 clpE O Belongs to the ClpA ClpB family
KHOHDOKI_00969 1.8e-86 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
KHOHDOKI_00970 7.4e-49 XK27_09445 S Domain of unknown function (DUF1827)
KHOHDOKI_00971 1.4e-50 yvaA 1.1.1.371 S inositol 2-dehydrogenase activity
KHOHDOKI_00972 7e-26 2.7.7.15 S inositol 2-dehydrogenase activity
KHOHDOKI_00973 7.8e-08 S oxidoreductase
KHOHDOKI_00974 6.6e-84 murN 2.3.2.10, 2.3.2.16 V FemAB family
KHOHDOKI_00975 2.4e-130 murN 2.3.2.10, 2.3.2.16 V FemAB family
KHOHDOKI_00976 4.4e-68 M Pfam SNARE associated Golgi protein
KHOHDOKI_00977 3.9e-31 S Domain of Unknown Function with PDB structure (DUF3862)
KHOHDOKI_00978 5.1e-29 S Domain of Unknown Function with PDB structure (DUF3862)
KHOHDOKI_00981 8.4e-205 rpsA 1.17.7.4 J ribosomal protein S1
KHOHDOKI_00984 4.8e-16 S Protein of unknown function (DUF2969)
KHOHDOKI_00985 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
KHOHDOKI_00986 2e-239 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
KHOHDOKI_00987 1.1e-206 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
KHOHDOKI_00988 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
KHOHDOKI_00989 7.1e-102 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
KHOHDOKI_00990 4.9e-15 L Helix-hairpin-helix DNA-binding motif class 1
KHOHDOKI_00991 1.4e-29 S Domain of unknown function (DUF1912)
KHOHDOKI_00992 3.4e-177 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
KHOHDOKI_00993 3.7e-249 mmuP E amino acid
KHOHDOKI_00994 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
KHOHDOKI_00995 3e-176 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
KHOHDOKI_00996 4.1e-40 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
KHOHDOKI_00997 9.7e-22
KHOHDOKI_00998 3.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
KHOHDOKI_00999 2.9e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
KHOHDOKI_01000 1.7e-218 mvaS 2.3.3.10 I synthase
KHOHDOKI_01001 1.6e-233 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
KHOHDOKI_01002 3.6e-120 yqfA K protein, Hemolysin III
KHOHDOKI_01003 3.6e-22 S Protein of unknown function (DUF3114)
KHOHDOKI_01004 7.3e-166 S Protein of unknown function (DUF3114)
KHOHDOKI_01005 1.1e-170 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
KHOHDOKI_01006 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
KHOHDOKI_01007 6.4e-21 XK27_13030
KHOHDOKI_01008 1.8e-248 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
KHOHDOKI_01009 1.5e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
KHOHDOKI_01010 5.5e-51 U protein secretion
KHOHDOKI_01011 3.5e-07 U protein secretion
KHOHDOKI_01013 2e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
KHOHDOKI_01014 2.5e-21
KHOHDOKI_01015 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
KHOHDOKI_01016 5.6e-253 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
KHOHDOKI_01017 5.2e-192 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
KHOHDOKI_01018 4.3e-178 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
KHOHDOKI_01019 2.5e-172 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
KHOHDOKI_01020 9.6e-150 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
KHOHDOKI_01021 4.6e-105 GBS0088 J protein conserved in bacteria
KHOHDOKI_01022 3.6e-249 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
KHOHDOKI_01024 2e-43 ald 1.4.1.1 C Belongs to the AlaDH PNT family
KHOHDOKI_01025 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
KHOHDOKI_01026 6.8e-220 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
KHOHDOKI_01027 7.4e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
KHOHDOKI_01028 2.5e-113 S VIT family
KHOHDOKI_01029 2e-143 deoD_1 2.4.2.3 F Phosphorylase superfamily
KHOHDOKI_01030 4.3e-22
KHOHDOKI_01031 1.9e-29 XK27_00085 K Transcriptional
KHOHDOKI_01032 6.9e-197 yceA S Belongs to the UPF0176 family
KHOHDOKI_01033 5.4e-122 sagI S ABC-2 type transporter
KHOHDOKI_01034 1.8e-167 V ABC transporter
KHOHDOKI_01035 1.9e-219 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
KHOHDOKI_01036 1.9e-132 rr02 KT response regulator
KHOHDOKI_01037 3.3e-215 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
KHOHDOKI_01038 2.3e-125 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
KHOHDOKI_01039 1.8e-195 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
KHOHDOKI_01040 0.0 lmrA V abc transporter atp-binding protein
KHOHDOKI_01041 0.0 mdlB V abc transporter atp-binding protein
KHOHDOKI_01043 3.9e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
KHOHDOKI_01044 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
KHOHDOKI_01045 7e-27 ytrF V efflux transmembrane transporter activity
KHOHDOKI_01046 3.7e-22 V efflux transmembrane transporter activity
KHOHDOKI_01047 8.3e-35 V permease protein
KHOHDOKI_01048 3.8e-43 V permease protein
KHOHDOKI_01049 6.9e-37 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KHOHDOKI_01050 7.6e-21 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
KHOHDOKI_01051 1.7e-123 J Putative SAM-dependent methyltransferase
KHOHDOKI_01052 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
KHOHDOKI_01053 5.5e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
KHOHDOKI_01054 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
KHOHDOKI_01055 3.7e-227 pyrP F uracil Permease
KHOHDOKI_01056 3.7e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
KHOHDOKI_01057 4.5e-163 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
KHOHDOKI_01058 1.5e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
KHOHDOKI_01059 1.2e-166 fhuR K transcriptional regulator (lysR family)
KHOHDOKI_01064 9.8e-60 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
KHOHDOKI_01065 2e-77 2.7.1.199, 2.7.1.211 G PTS glucose transporter subunit IIA
KHOHDOKI_01066 9e-96 pts33BCA G pts system
KHOHDOKI_01067 5.8e-71 pts33BCA G pts system
KHOHDOKI_01068 1.5e-25 2.7.1.208, 2.7.1.211 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
KHOHDOKI_01069 1.4e-09 uvrX 2.7.7.7 L impB/mucB/samB family
KHOHDOKI_01070 2.5e-253 cycA E permease
KHOHDOKI_01071 4.5e-39 ynzC S UPF0291 protein
KHOHDOKI_01072 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
KHOHDOKI_01073 1.8e-27 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
KHOHDOKI_01074 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
KHOHDOKI_01075 7.8e-61
KHOHDOKI_01076 2.8e-25
KHOHDOKI_01077 7.4e-55
KHOHDOKI_01078 2.3e-220 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
KHOHDOKI_01079 7e-27 nptA P COG1283 Na phosphate symporter
KHOHDOKI_01080 4.3e-28 nptA P sodium-dependent phosphate transmembrane transporter activity
KHOHDOKI_01081 1.3e-32 nptA P sodium-dependent phosphate transmembrane transporter activity
KHOHDOKI_01082 5.8e-149 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
KHOHDOKI_01083 3.2e-105 mur1 NU mannosyl-glycoprotein
KHOHDOKI_01084 6.6e-54 glnB K Belongs to the P(II) protein family
KHOHDOKI_01085 1.7e-232 amt P Ammonium Transporter
KHOHDOKI_01086 2.7e-160 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
KHOHDOKI_01087 9.5e-55 yabA L Involved in initiation control of chromosome replication
KHOHDOKI_01088 1.2e-135 yaaT S stage 0 sporulation protein
KHOHDOKI_01089 7.1e-161 holB 2.7.7.7 L dna polymerase iii
KHOHDOKI_01090 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
KHOHDOKI_01091 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
KHOHDOKI_01092 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
KHOHDOKI_01093 8.1e-230 ftsW D Belongs to the SEDS family
KHOHDOKI_01094 5.2e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
KHOHDOKI_01095 6.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
KHOHDOKI_01096 2.5e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
KHOHDOKI_01097 3.8e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
KHOHDOKI_01098 3.5e-86 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
KHOHDOKI_01099 3.3e-78 atpF C ATP synthase F(0) sector subunit b
KHOHDOKI_01100 9e-114 atpB C it plays a direct role in the translocation of protons across the membrane
KHOHDOKI_01101 3.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
KHOHDOKI_01102 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
KHOHDOKI_01103 1.4e-18 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
KHOHDOKI_01104 1.9e-46 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
KHOHDOKI_01105 1.7e-102 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
KHOHDOKI_01106 8.9e-14 coiA 3.6.4.12 S Competence protein
KHOHDOKI_01107 2.2e-15 T peptidase
KHOHDOKI_01108 3.2e-24 rarD S Transporter
KHOHDOKI_01109 6.5e-76 rarD S Transporter
KHOHDOKI_01110 2.8e-154 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
KHOHDOKI_01111 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
KHOHDOKI_01112 1.1e-101 yxkH G deacetylase
KHOHDOKI_01113 1.1e-209 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
KHOHDOKI_01114 1.8e-128 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
KHOHDOKI_01115 2.1e-73 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
KHOHDOKI_01116 6.3e-137 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
KHOHDOKI_01117 1.5e-191 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
KHOHDOKI_01118 2.4e-228 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
KHOHDOKI_01119 5.3e-147 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
KHOHDOKI_01120 5e-123 3.4.17.14, 3.5.1.28 NU amidase activity
KHOHDOKI_01121 5.8e-42 S pathogenesis
KHOHDOKI_01122 1.7e-92 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
KHOHDOKI_01123 4.6e-24 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
KHOHDOKI_01124 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
KHOHDOKI_01125 1.2e-176 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
KHOHDOKI_01126 1.4e-127 yrrM 2.1.1.104 S O-Methyltransferase
KHOHDOKI_01127 0.0 pepF E oligoendopeptidase F
KHOHDOKI_01128 1.4e-186 coiA 3.6.4.12 S Competence protein
KHOHDOKI_01129 3.4e-166 K transcriptional regulator (lysR family)
KHOHDOKI_01130 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
KHOHDOKI_01134 2.3e-190 phoH T phosphate starvation-inducible protein PhoH
KHOHDOKI_01135 1.4e-61 rlpA M LysM domain protein
KHOHDOKI_01136 6.8e-89 usp 3.5.1.28 CBM50 S CHAP domain
KHOHDOKI_01137 2.2e-88 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
KHOHDOKI_01138 8.6e-140 mreC M Involved in formation and maintenance of cell shape
KHOHDOKI_01143 2e-34 waaB GT4 M Glycosyl transferases group 1
KHOHDOKI_01144 2.6e-10 waaB GT4 H Glycosyltransferase Family 4
KHOHDOKI_01145 2.3e-67 tnp L DDE domain
KHOHDOKI_01146 3.2e-08 tnp L DDE domain
KHOHDOKI_01147 5.6e-90 V VanZ like family
KHOHDOKI_01148 4e-105 cps2J S Polysaccharide biosynthesis protein
KHOHDOKI_01149 2e-52 yxaB GM Polysaccharide pyruvyl transferase
KHOHDOKI_01150 2.2e-35 S Core-2 I-Branching enzyme
KHOHDOKI_01151 1.6e-32 S EpsG family
KHOHDOKI_01152 2.3e-59 S Glycosyltransferase like family 2
KHOHDOKI_01153 9e-33 epsH S Hexapeptide repeat of succinyl-transferase
KHOHDOKI_01154 2.3e-63 2.4.1.21 GT4,GT5 G Glycosyl transferase 4-like domain
KHOHDOKI_01155 2.9e-83 M Glycosyl transferase 4-like
KHOHDOKI_01157 2.7e-59 rfbP 2.7.8.6 M Bacterial sugar transferase
KHOHDOKI_01158 9.5e-114 cpsD D COG0489 ATPases involved in chromosome partitioning
KHOHDOKI_01159 7.2e-100 cps4C M biosynthesis protein
KHOHDOKI_01160 1.9e-135 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
KHOHDOKI_01161 7.4e-248 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
KHOHDOKI_01162 9e-130 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
KHOHDOKI_01163 1.3e-115 yfeJ 6.3.5.2 F glutamine amidotransferase
KHOHDOKI_01164 4e-54 clcA_2 P chloride channel
KHOHDOKI_01165 1.2e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
KHOHDOKI_01166 5.2e-67 S Protein of unknown function (DUF1697)
KHOHDOKI_01167 3.2e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
KHOHDOKI_01168 5e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
KHOHDOKI_01169 1.7e-32 V Glucan-binding protein C
KHOHDOKI_01170 3.4e-111 ung2 3.2.2.27 L Uracil-DNA glycosylase
KHOHDOKI_01171 2.4e-275 pepV 3.5.1.18 E Dipeptidase
KHOHDOKI_01172 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
KHOHDOKI_01173 6.9e-86 XK27_03610 K Gnat family
KHOHDOKI_01174 1.6e-24 L Transposase
KHOHDOKI_01175 5.8e-42 L Transposase
KHOHDOKI_01176 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
KHOHDOKI_01177 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
KHOHDOKI_01178 9.8e-89 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
KHOHDOKI_01179 1.1e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
KHOHDOKI_01180 8.2e-18 M LysM domain
KHOHDOKI_01181 2.9e-90 ebsA S Family of unknown function (DUF5322)
KHOHDOKI_01182 3e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
KHOHDOKI_01184 2.1e-76 yocD 3.4.17.13 V carboxypeptidase activity
KHOHDOKI_01185 7.1e-92 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
KHOHDOKI_01187 1.3e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
KHOHDOKI_01188 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
KHOHDOKI_01189 1.1e-83 S Putative small multi-drug export protein
KHOHDOKI_01190 2.4e-75 ctsR K Belongs to the CtsR family
KHOHDOKI_01191 0.0 clpC O Belongs to the ClpA ClpB family
KHOHDOKI_01192 2.4e-101 dacA 3.4.16.4 M Belongs to the peptidase S11 family
KHOHDOKI_01193 8.4e-53 dacA 3.4.16.4 M Belongs to the peptidase S11 family
KHOHDOKI_01194 4.2e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
KHOHDOKI_01195 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
KHOHDOKI_01196 2e-143 S SseB protein N-terminal domain
KHOHDOKI_01197 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
KHOHDOKI_01198 1.7e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
KHOHDOKI_01199 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
KHOHDOKI_01202 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
KHOHDOKI_01203 7e-92 yacP S RNA-binding protein containing a PIN domain
KHOHDOKI_01204 3.4e-155 degV S DegV family
KHOHDOKI_01205 1.8e-31 K helix-turn-helix
KHOHDOKI_01206 1.6e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
KHOHDOKI_01207 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
KHOHDOKI_01208 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
KHOHDOKI_01209 9.1e-34 K Peptidase S24-like
KHOHDOKI_01211 8.4e-102 S Lantibiotic dehydratase, C terminus
KHOHDOKI_01212 0.0 S Lantibiotic dehydratase, C terminus
KHOHDOKI_01213 2.4e-231 spaC2 V Lanthionine synthetase C family protein
KHOHDOKI_01214 2.5e-183 EGP Major facilitator Superfamily
KHOHDOKI_01215 1.6e-91 3.6.4.12 K Divergent AAA domain protein
KHOHDOKI_01216 1.4e-50 int L Belongs to the 'phage' integrase family
KHOHDOKI_01217 1.3e-27 int L Belongs to the 'phage' integrase family
KHOHDOKI_01218 4.4e-13 S Helix-turn-helix domain
KHOHDOKI_01220 1.1e-133
KHOHDOKI_01221 6.2e-42
KHOHDOKI_01222 5.5e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
KHOHDOKI_01223 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
KHOHDOKI_01224 1.1e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
KHOHDOKI_01225 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
KHOHDOKI_01226 1.7e-173 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
KHOHDOKI_01227 4e-161 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
KHOHDOKI_01228 4.4e-220 amrA S membrane protein involved in the export of O-antigen and teichoic acid
KHOHDOKI_01229 1.9e-141 M Glycosyltransferase group 2 family protein
KHOHDOKI_01230 4.6e-39 arnC M group 2 family protein
KHOHDOKI_01231 2.2e-125 ycbB S Glycosyl transferase family 2
KHOHDOKI_01232 2.6e-47 XK27_09090 S Uncharacterized conserved protein (DUF2304)
KHOHDOKI_01233 1.3e-105 2.4.1.60 S Glycosyltransferase group 2 family protein
KHOHDOKI_01234 1e-223 rgpA GT4 M Domain of unknown function (DUF1972)
KHOHDOKI_01235 2.4e-175 rgpB GT2 M Glycosyltransferase, group 2 family protein
KHOHDOKI_01236 8e-143 rgpC GM Transport permease protein
KHOHDOKI_01237 8.4e-229 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
KHOHDOKI_01238 3.8e-304 GT4 M transferase activity, transferring glycosyl groups
KHOHDOKI_01239 0.0 rgpF M Rhamnan synthesis protein F
KHOHDOKI_01240 2.5e-267 M Psort location CytoplasmicMembrane, score
KHOHDOKI_01241 1.4e-119 radC E Belongs to the UPF0758 family
KHOHDOKI_01242 8.8e-130 puuD T peptidase C26
KHOHDOKI_01243 8.2e-117 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
KHOHDOKI_01244 3.1e-59 XK27_04120 S Putative amino acid metabolism
KHOHDOKI_01245 3.2e-206 iscS 2.8.1.7 E Cysteine desulfurase
KHOHDOKI_01246 2.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
KHOHDOKI_01247 1.5e-103 yjbK S Adenylate cyclase
KHOHDOKI_01248 1.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
KHOHDOKI_01249 4e-153 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
KHOHDOKI_01250 9.8e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
KHOHDOKI_01251 1.4e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
KHOHDOKI_01252 7.4e-39 L transposase activity
KHOHDOKI_01253 7.2e-22 L Transposase
KHOHDOKI_01254 6e-28 L transposition
KHOHDOKI_01255 7.5e-109 L PFAM Integrase catalytic region
KHOHDOKI_01256 2.8e-216 oxlT P COG0477 Permeases of the major facilitator superfamily
KHOHDOKI_01257 4e-40 tatD L Hydrolase, tatd
KHOHDOKI_01258 1.6e-148 dtpT U POT family
KHOHDOKI_01259 1.9e-77 dtpT E transporter
KHOHDOKI_01260 9.3e-55 nylA 3.5.1.4 J Belongs to the amidase family
KHOHDOKI_01262 5.7e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
KHOHDOKI_01263 3.8e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
KHOHDOKI_01264 1.3e-72 csm6 S Psort location Cytoplasmic, score
KHOHDOKI_01265 3e-14 csm6 S Psort location Cytoplasmic, score
KHOHDOKI_01266 4.4e-205 csm5 L CRISPR-associated RAMP protein, Csm5 family
KHOHDOKI_01267 4e-167 csm4 L CRISPR-associated RAMP protein, Csm4 family
KHOHDOKI_01268 8.1e-117 csm3 L RAMP superfamily
KHOHDOKI_01269 5.6e-62 csm2 L Pfam:DUF310
KHOHDOKI_01270 0.0 csm1 S CRISPR-associated protein Csm1 family
KHOHDOKI_01271 1.9e-81 csm1 S CRISPR-associated protein Csm1 family
KHOHDOKI_01272 6.8e-133 cas6 S Pfam:DUF2276
KHOHDOKI_01273 3.7e-54 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
KHOHDOKI_01274 2.2e-69 cas1 L maintenance of DNA repeat elements
KHOHDOKI_01275 2.8e-111 cas1 L maintenance of DNA repeat elements
KHOHDOKI_01276 1.1e-175 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
KHOHDOKI_01277 1.5e-149 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
KHOHDOKI_01278 5.9e-97 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
KHOHDOKI_01279 9.7e-89 S TraX protein
KHOHDOKI_01281 2.1e-310 FbpA K RNA-binding protein homologous to eukaryotic snRNP
KHOHDOKI_01283 4.7e-28 dinF V Mate efflux family protein
KHOHDOKI_01284 4.2e-75 dinF V Mate efflux family protein
KHOHDOKI_01285 1.2e-18 yclQ P ABC-type enterochelin transport system, periplasmic component
KHOHDOKI_01286 3.6e-14 yclQ P ABC-type enterochelin transport system, periplasmic component
KHOHDOKI_01287 9.8e-120 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
KHOHDOKI_01288 6.9e-144 2.4.2.3 F Phosphorylase superfamily
KHOHDOKI_01291 1.2e-79 S Alpha/beta hydrolase of unknown function (DUF915)
KHOHDOKI_01292 7.9e-17 S Alpha/beta hydrolase of unknown function (DUF915)
KHOHDOKI_01293 6e-08 S Hydrolases of the alpha beta superfamily
KHOHDOKI_01294 8.1e-196 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
KHOHDOKI_01295 7.5e-135 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
KHOHDOKI_01296 1.5e-52 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
KHOHDOKI_01297 2.3e-159 czcD P cation diffusion facilitator family transporter
KHOHDOKI_01298 6.9e-98 K Transcriptional regulator, TetR family
KHOHDOKI_01299 1.6e-10
KHOHDOKI_01300 3.5e-113 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
KHOHDOKI_01301 5.9e-116 V ABC transporter (Permease
KHOHDOKI_01302 1.9e-68 supH 3.1.3.102, 3.1.3.104 Q phosphatase activity
KHOHDOKI_01303 1.4e-87 G Belongs to the phosphoglycerate mutase family
KHOHDOKI_01304 7.7e-200 S hmm pf01594
KHOHDOKI_01305 4.1e-29 bglH 3.2.1.86 GT1 G beta-glucosidase activity
KHOHDOKI_01306 5.1e-101 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
KHOHDOKI_01307 3.8e-43 bglH 3.2.1.86 GT1 G beta-glucosidase activity
KHOHDOKI_01308 1.1e-36 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
KHOHDOKI_01309 1.3e-39 S granule-associated protein
KHOHDOKI_01310 5.2e-295 S unusual protein kinase
KHOHDOKI_01311 4.6e-85 estA E GDSL-like protein
KHOHDOKI_01312 1.3e-159 rssA S Phospholipase, patatin family
KHOHDOKI_01313 5.5e-147 3.4.16.4 M Belongs to the peptidase S11 family
KHOHDOKI_01314 2.4e-23 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
KHOHDOKI_01315 8.6e-218 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
KHOHDOKI_01316 2.9e-127 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
KHOHDOKI_01317 2.2e-235 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
KHOHDOKI_01318 9.7e-65 S the current gene model (or a revised gene model) may contain a frame shift
KHOHDOKI_01319 4.6e-38 P membrane protein (DUF2207)
KHOHDOKI_01320 4.6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
KHOHDOKI_01321 8.3e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
KHOHDOKI_01322 2.1e-199 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
KHOHDOKI_01323 0.0 lpdA 1.8.1.4 C Dehydrogenase
KHOHDOKI_01324 2.8e-19 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
KHOHDOKI_01325 3.8e-69 3.2.1.17 M lysozyme activity
KHOHDOKI_01326 4.6e-238 L Transposase
KHOHDOKI_01327 6.7e-156 K Transcriptional activator, Rgg GadR MutR family
KHOHDOKI_01328 3.2e-172 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
KHOHDOKI_01329 2e-103 L nUDIX hydrolase
KHOHDOKI_01330 3.2e-19 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
KHOHDOKI_01331 3.7e-165 metQ M Belongs to the NlpA lipoprotein family
KHOHDOKI_01332 1.3e-87 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
KHOHDOKI_01333 1.4e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
KHOHDOKI_01334 1.7e-63 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
KHOHDOKI_01335 1.5e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
KHOHDOKI_01336 3e-98 metI P ABC transporter (Permease
KHOHDOKI_01337 4.2e-60 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
KHOHDOKI_01338 2.6e-141 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
KHOHDOKI_01339 3.2e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
KHOHDOKI_01340 8e-94 S UPF0397 protein
KHOHDOKI_01341 0.0 ykoD P abc transporter atp-binding protein
KHOHDOKI_01342 1.7e-148 cbiQ P cobalt transport
KHOHDOKI_01343 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
KHOHDOKI_01344 1.4e-11 ulaG S L-ascorbate 6-phosphate lactonase
KHOHDOKI_01345 1.4e-121 ktrA P COG0569 K transport systems, NAD-binding component
KHOHDOKI_01346 4.2e-245 P COG0168 Trk-type K transport systems, membrane components
KHOHDOKI_01347 1.1e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
KHOHDOKI_01348 2.1e-91 yceD K metal-binding, possibly nucleic acid-binding protein
KHOHDOKI_01349 1.8e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
KHOHDOKI_01350 1.4e-281 T PhoQ Sensor
KHOHDOKI_01351 2.8e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
KHOHDOKI_01352 1.3e-218 dnaB L Replication initiation and membrane attachment
KHOHDOKI_01353 4e-167 dnaI L Primosomal protein DnaI
KHOHDOKI_01354 1.1e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
KHOHDOKI_01355 3.5e-283 P ABC transporter transmembrane region
KHOHDOKI_01357 3.3e-62 rplQ J ribosomal protein l17
KHOHDOKI_01358 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KHOHDOKI_01359 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
KHOHDOKI_01360 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
KHOHDOKI_01361 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
KHOHDOKI_01362 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
KHOHDOKI_01363 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
KHOHDOKI_01364 3.3e-231 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
KHOHDOKI_01365 7.4e-58 rplO J binds to the 23S rRNA
KHOHDOKI_01366 2.5e-23 rpmD J ribosomal protein l30
KHOHDOKI_01367 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
KHOHDOKI_01368 1.1e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
KHOHDOKI_01369 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
KHOHDOKI_01370 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
KHOHDOKI_01371 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
KHOHDOKI_01372 1.2e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
KHOHDOKI_01373 1.1e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
KHOHDOKI_01374 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
KHOHDOKI_01375 2e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
KHOHDOKI_01376 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
KHOHDOKI_01377 3.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
KHOHDOKI_01378 3.6e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
KHOHDOKI_01379 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
KHOHDOKI_01380 8.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
KHOHDOKI_01381 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
KHOHDOKI_01382 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
KHOHDOKI_01383 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
KHOHDOKI_01384 1.8e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
KHOHDOKI_01385 1.3e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
KHOHDOKI_01386 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
KHOHDOKI_01387 0.0 XK27_09800 I Acyltransferase
KHOHDOKI_01388 1.7e-35 XK27_09805 S MORN repeat protein
KHOHDOKI_01389 1.8e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
KHOHDOKI_01390 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
KHOHDOKI_01391 8.9e-95 adk 2.7.4.3 F topology modulation protein
KHOHDOKI_01392 3.1e-172 yxaM EGP Major facilitator Superfamily
KHOHDOKI_01393 1.9e-197 2.7.7.73, 2.7.7.80 H Involved in molybdopterin and thiamine biosynthesis, family 2
KHOHDOKI_01394 3.3e-133 V ATPase activity
KHOHDOKI_01395 9.8e-121 skfE V abc transporter atp-binding protein
KHOHDOKI_01396 8.6e-63 yvoA_1 K Transcriptional
KHOHDOKI_01397 5.8e-28 supH S overlaps another CDS with the same product name
KHOHDOKI_01398 2.8e-108 supH S overlaps another CDS with the same product name
KHOHDOKI_01399 4.2e-147 XK27_02985 S overlaps another CDS with the same product name
KHOHDOKI_01400 1.8e-219 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
KHOHDOKI_01401 8.8e-113 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
KHOHDOKI_01402 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
KHOHDOKI_01403 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
KHOHDOKI_01404 3.5e-174 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
KHOHDOKI_01405 4.4e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
KHOHDOKI_01406 2e-132 stp 3.1.3.16 T phosphatase
KHOHDOKI_01407 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
KHOHDOKI_01408 3.7e-120 yvqF KT membrane
KHOHDOKI_01409 1.7e-174 vraS 2.7.13.3 T Histidine kinase
KHOHDOKI_01410 2.6e-77 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
KHOHDOKI_01413 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
KHOHDOKI_01414 3.6e-134 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
KHOHDOKI_01415 8.7e-93 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
KHOHDOKI_01416 1.3e-84 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
KHOHDOKI_01417 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
KHOHDOKI_01418 1.2e-160 S CHAP domain
KHOHDOKI_01419 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
KHOHDOKI_01420 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
KHOHDOKI_01421 2.2e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
KHOHDOKI_01422 9.2e-141 1.1.1.169 H Ketopantoate reductase
KHOHDOKI_01423 1.2e-24
KHOHDOKI_01424 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
KHOHDOKI_01425 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
KHOHDOKI_01426 8.2e-70 argR K Regulates arginine biosynthesis genes
KHOHDOKI_01427 1e-57 ymcA 3.6.3.21 S Belongs to the UPF0342 family
KHOHDOKI_01428 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
KHOHDOKI_01429 6.4e-35 S Protein of unknown function (DUF3021)
KHOHDOKI_01430 1.2e-61 KT phosphorelay signal transduction system
KHOHDOKI_01432 3.2e-114 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
KHOHDOKI_01433 7.5e-208 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
KHOHDOKI_01435 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
KHOHDOKI_01436 5.5e-28 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
KHOHDOKI_01437 3.8e-232 cinA 3.5.1.42 S Belongs to the CinA family
KHOHDOKI_01438 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
KHOHDOKI_01439 2.3e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
KHOHDOKI_01440 7.8e-19 pvuIIC K Helix-turn-helix domain
KHOHDOKI_01444 6.3e-38
KHOHDOKI_01445 2.1e-39
KHOHDOKI_01446 1.5e-100 L helicase
KHOHDOKI_01447 7e-68 nudG 3.6.1.55, 3.6.1.65 L Belongs to the Nudix hydrolase family
KHOHDOKI_01448 2.4e-10
KHOHDOKI_01449 1e-79 mntH P H( )-stimulated, divalent metal cation uptake system
KHOHDOKI_01450 9.7e-144 mntH P H( )-stimulated, divalent metal cation uptake system
KHOHDOKI_01451 1.5e-12 XK27_12190 S protein conserved in bacteria
KHOHDOKI_01453 5.8e-89 bioY S biotin synthase
KHOHDOKI_01454 3.4e-252 yegQ O Peptidase U32
KHOHDOKI_01455 3e-178 yegQ O Peptidase U32
KHOHDOKI_01457 1e-67 ytxH S General stress protein
KHOHDOKI_01459 1.5e-146 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
KHOHDOKI_01460 3.1e-170 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
KHOHDOKI_01461 2.9e-41 pspC KT PspC domain
KHOHDOKI_01462 4.9e-86 ydcK S Belongs to the SprT family
KHOHDOKI_01463 0.0 yhgF K Transcriptional accessory protein
KHOHDOKI_01465 3.4e-158 XK27_03015 S permease
KHOHDOKI_01466 3.4e-149 ycgQ S TIGR03943 family
KHOHDOKI_01467 1.7e-128 T PhoQ Sensor
KHOHDOKI_01468 1.7e-43 T PhoQ Sensor
KHOHDOKI_01469 4.3e-41 T PhoQ Sensor
KHOHDOKI_01470 1.1e-84 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
KHOHDOKI_01471 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
KHOHDOKI_01472 1.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
KHOHDOKI_01473 6.7e-48 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
KHOHDOKI_01474 8.2e-35 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
KHOHDOKI_01475 1.4e-93 panT S ECF transporter, substrate-specific component
KHOHDOKI_01476 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
KHOHDOKI_01477 7.3e-166 metF 1.5.1.20 C reductase
KHOHDOKI_01478 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
KHOHDOKI_01480 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
KHOHDOKI_01481 0.0 3.6.3.8 P cation transport ATPase
KHOHDOKI_01482 2.1e-30 rpsT J rRNA binding
KHOHDOKI_01483 1.1e-172 coaA 2.7.1.33 F Pantothenic acid kinase
KHOHDOKI_01484 2.3e-107 rsmC 2.1.1.172 J Methyltransferase small domain protein
KHOHDOKI_01485 6.9e-26 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
KHOHDOKI_01486 1e-23 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
KHOHDOKI_01487 4.5e-59 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
KHOHDOKI_01488 8.6e-65 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
KHOHDOKI_01489 6e-21 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
KHOHDOKI_01490 4.8e-64 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
KHOHDOKI_01491 4.7e-57 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
KHOHDOKI_01492 2.1e-191 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
KHOHDOKI_01493 3.7e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
KHOHDOKI_01494 3e-190 yufP S Belongs to the binding-protein-dependent transport system permease family
KHOHDOKI_01495 8.3e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
KHOHDOKI_01496 8.9e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
KHOHDOKI_01497 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
KHOHDOKI_01498 8.9e-30 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
KHOHDOKI_01499 6.8e-81 ypmB S Protein conserved in bacteria
KHOHDOKI_01500 1.9e-217 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
KHOHDOKI_01501 4.9e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
KHOHDOKI_01503 8.1e-08
KHOHDOKI_01504 2.4e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
KHOHDOKI_01505 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
KHOHDOKI_01506 6.7e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
KHOHDOKI_01507 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
KHOHDOKI_01508 2.4e-142 purR 2.4.2.7 F operon repressor
KHOHDOKI_01509 5.3e-178 cbf S 3'-5' exoribonuclease yhaM
KHOHDOKI_01510 6.9e-173 rmuC S RmuC domain protein
KHOHDOKI_01511 2.4e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
KHOHDOKI_01512 3e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
KHOHDOKI_01513 1.2e-163 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
KHOHDOKI_01515 8.9e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
KHOHDOKI_01516 1.1e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
KHOHDOKI_01517 1.4e-144 tatD L Hydrolase, tatd
KHOHDOKI_01518 1.5e-74 yccU S CoA-binding protein
KHOHDOKI_01519 4.8e-51 trxA O Belongs to the thioredoxin family
KHOHDOKI_01520 1.7e-142 S Macro domain protein
KHOHDOKI_01521 9.1e-10 L thioesterase
KHOHDOKI_01523 1.2e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
KHOHDOKI_01524 9.5e-26
KHOHDOKI_01525 2.9e-218 araT 2.6.1.1 E Aminotransferase
KHOHDOKI_01526 7e-144 recO L Involved in DNA repair and RecF pathway recombination
KHOHDOKI_01527 1.3e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
KHOHDOKI_01528 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
KHOHDOKI_01529 2e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
KHOHDOKI_01530 6.6e-276 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
KHOHDOKI_01531 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
KHOHDOKI_01532 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
KHOHDOKI_01533 3.7e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
KHOHDOKI_01534 1.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
KHOHDOKI_01535 2.3e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
KHOHDOKI_01536 6.8e-76 isp2 S pathogenesis
KHOHDOKI_01537 5.7e-91 tnp L Transposase
KHOHDOKI_01538 4.6e-42 capA M Bacterial capsule synthesis protein PGA_cap
KHOHDOKI_01539 4.3e-109 capA M Bacterial capsule synthesis protein
KHOHDOKI_01540 2.8e-57 capA M Bacterial capsule synthesis protein
KHOHDOKI_01541 1e-38 gcvR T UPF0237 protein
KHOHDOKI_01542 1.7e-243 XK27_08635 S UPF0210 protein
KHOHDOKI_01543 1.6e-117 ais G Phosphoglycerate mutase
KHOHDOKI_01544 8.8e-142 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
KHOHDOKI_01545 5e-102 acmA 3.2.1.17 NU amidase activity
KHOHDOKI_01546 5.3e-198 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
KHOHDOKI_01547 1.5e-71 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
KHOHDOKI_01548 7.5e-298 dnaK O Heat shock 70 kDa protein
KHOHDOKI_01549 6.2e-140 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
KHOHDOKI_01550 7.7e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
KHOHDOKI_01551 5e-48 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
KHOHDOKI_01552 2.9e-79 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
KHOHDOKI_01553 1.6e-61 hmpT S membrane
KHOHDOKI_01554 1.7e-93 S thiolester hydrolase activity
KHOHDOKI_01555 8.1e-145 S COG1073 Hydrolases of the alpha beta superfamily
KHOHDOKI_01556 9.6e-280 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
KHOHDOKI_01557 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
KHOHDOKI_01558 5.5e-77 yhaI L Membrane
KHOHDOKI_01559 6e-260 pepC 3.4.22.40 E aminopeptidase
KHOHDOKI_01560 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
KHOHDOKI_01561 2.5e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
KHOHDOKI_01562 3.1e-95 ypsA S Belongs to the UPF0398 family
KHOHDOKI_01563 5.1e-51 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
KHOHDOKI_01564 5.1e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
KHOHDOKI_01565 0.0 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
KHOHDOKI_01566 9.4e-183 L Transposase and inactivated derivatives IS30 family
KHOHDOKI_01567 1.4e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
KHOHDOKI_01568 2.8e-202 arcT 2.6.1.1 E Aminotransferase
KHOHDOKI_01569 7.2e-136 ET Belongs to the bacterial solute-binding protein 3 family
KHOHDOKI_01570 1.3e-143 ET Belongs to the bacterial solute-binding protein 3 family
KHOHDOKI_01571 2.2e-84 mutT 3.6.1.55 F Nudix family
KHOHDOKI_01572 5.8e-118 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
KHOHDOKI_01573 2.8e-241 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
KHOHDOKI_01574 2.9e-57 V CAAX protease self-immunity
KHOHDOKI_01575 7.6e-32 S CAAX amino terminal protease family protein
KHOHDOKI_01576 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
KHOHDOKI_01577 6e-137 glnQ 3.6.3.21 E abc transporter atp-binding protein
KHOHDOKI_01578 1.1e-16 XK27_00735
KHOHDOKI_01579 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
KHOHDOKI_01581 7.3e-135 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
KHOHDOKI_01584 2.3e-107 abiGI K Transcriptional regulator, AbiEi antitoxin
KHOHDOKI_01585 7.7e-52 V Psort location Cytoplasmic, score
KHOHDOKI_01586 2.3e-156 K sequence-specific DNA binding
KHOHDOKI_01587 8.9e-253 C Arylsulfatase regulator (Fe-S oxidoreductase)
KHOHDOKI_01588 3.5e-207 V (ABC) transporter
KHOHDOKI_01589 4e-30 V (ABC) transporter
KHOHDOKI_01590 9.6e-10
KHOHDOKI_01591 1.9e-43 S Domain of unknown function (DUF4299)
KHOHDOKI_01592 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
KHOHDOKI_01593 5.9e-155 EG Permeases of the drug metabolite transporter (DMT) superfamily
KHOHDOKI_01595 3.1e-113 serB 3.1.3.3 E phosphoserine phosphatase
KHOHDOKI_01596 3e-304 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
KHOHDOKI_01597 6.5e-122 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
KHOHDOKI_01598 1.6e-230 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
KHOHDOKI_01599 2.6e-109 3.1.3.18 S IA, variant 1
KHOHDOKI_01600 2.2e-117 lrgB M effector of murein hydrolase
KHOHDOKI_01601 2.2e-58 lrgA S Effector of murein hydrolase LrgA
KHOHDOKI_01603 5.4e-59 arsC 1.20.4.1 P Belongs to the ArsC family
KHOHDOKI_01604 3.1e-56 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
KHOHDOKI_01605 1.1e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
KHOHDOKI_01606 1.3e-104 wecD M Acetyltransferase (GNAT) domain
KHOHDOKI_01607 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
KHOHDOKI_01608 5.4e-116 GK ROK family
KHOHDOKI_01609 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
KHOHDOKI_01610 1e-115 XK27_08050 O HflC and HflK could regulate a protease
KHOHDOKI_01612 2.3e-206 potD P spermidine putrescine ABC transporter
KHOHDOKI_01613 3.6e-132 potC P ABC-type spermidine putrescine transport system, permease component II
KHOHDOKI_01614 1.4e-139 potB P ABC-type spermidine putrescine transport system, permease component I
KHOHDOKI_01615 3.6e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
KHOHDOKI_01616 4.6e-171 murB 1.3.1.98 M cell wall formation
KHOHDOKI_01617 5e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
KHOHDOKI_01618 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
KHOHDOKI_01619 1.2e-298 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
KHOHDOKI_01620 7e-147 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
KHOHDOKI_01621 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
KHOHDOKI_01622 0.0 ydaO E amino acid
KHOHDOKI_01623 1.1e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
KHOHDOKI_01624 4.1e-37 ylqC L Belongs to the UPF0109 family
KHOHDOKI_01625 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
KHOHDOKI_01626 2.6e-171 tehB 2.1.1.265 PQ tellurite resistance protein tehb
KHOHDOKI_01627 2e-157 xth 3.1.11.2 L exodeoxyribonuclease III
KHOHDOKI_01628 2.8e-74 S QueT transporter
KHOHDOKI_01629 5.2e-121 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
KHOHDOKI_01630 4.3e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
KHOHDOKI_01631 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
KHOHDOKI_01632 1.3e-85 ccl S cog cog4708
KHOHDOKI_01633 6.5e-160 rbn E Belongs to the UPF0761 family
KHOHDOKI_01634 5.5e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
KHOHDOKI_01635 1.7e-232 ytoI K transcriptional regulator containing CBS domains
KHOHDOKI_01636 1.8e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
KHOHDOKI_01637 1.2e-233 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
KHOHDOKI_01638 0.0 comEC S Competence protein ComEC
KHOHDOKI_01639 4e-98 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
KHOHDOKI_01640 1.3e-142 plsC 2.3.1.51 I Acyltransferase
KHOHDOKI_01641 1.4e-82 nodB3 G polysaccharide deacetylase
KHOHDOKI_01642 4.1e-49 nodB3 G polysaccharide deacetylase
KHOHDOKI_01643 9.3e-141 yabB 2.1.1.223 L Methyltransferase
KHOHDOKI_01644 1e-41 yazA L endonuclease containing a URI domain
KHOHDOKI_01645 2.8e-256 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
KHOHDOKI_01646 2.3e-154 corA P CorA-like protein
KHOHDOKI_01647 2.5e-62 yjqA S Bacterial PH domain
KHOHDOKI_01648 7.8e-100 thiT S Thiamine transporter
KHOHDOKI_01649 9.5e-158 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
KHOHDOKI_01650 2.9e-147 yjbB G Permeases of the major facilitator superfamily
KHOHDOKI_01651 2.3e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
KHOHDOKI_01652 1.1e-121 ywaF S Integral membrane protein (intg_mem_TP0381)
KHOHDOKI_01653 3.6e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
KHOHDOKI_01656 1.1e-155 cjaA ET ABC transporter substrate-binding protein
KHOHDOKI_01657 1.4e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
KHOHDOKI_01658 7.8e-107 P ABC transporter (Permease
KHOHDOKI_01659 6e-115 papP P ABC transporter (Permease
KHOHDOKI_01660 8.4e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
KHOHDOKI_01661 4.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
KHOHDOKI_01662 0.0 copA 3.6.3.54 P P-type ATPase
KHOHDOKI_01663 3.2e-74 copY K negative regulation of transcription, DNA-templated
KHOHDOKI_01664 4.6e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
KHOHDOKI_01665 9.3e-228 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
KHOHDOKI_01666 5.5e-101 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
KHOHDOKI_01667 1.9e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
KHOHDOKI_01668 4.4e-164 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
KHOHDOKI_01669 2.1e-105 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
KHOHDOKI_01670 2.5e-258 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
KHOHDOKI_01671 1.3e-42 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
KHOHDOKI_01672 3.2e-56
KHOHDOKI_01673 0.0 ctpE P E1-E2 ATPase
KHOHDOKI_01674 6.1e-27
KHOHDOKI_01675 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
KHOHDOKI_01676 1.9e-46 L transposase activity
KHOHDOKI_01677 2.7e-30 K transcriptional regulator, MerR family
KHOHDOKI_01678 3.7e-105 dnaQ 2.7.7.7 L DNA polymerase III
KHOHDOKI_01679 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
KHOHDOKI_01680 4.8e-63 XK27_02560 S cog cog2151
KHOHDOKI_01681 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
KHOHDOKI_01682 7.7e-227 ytfP S Flavoprotein
KHOHDOKI_01684 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
KHOHDOKI_01685 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
KHOHDOKI_01686 3.9e-182 ecsB U ABC transporter
KHOHDOKI_01687 2.3e-133 ecsA V abc transporter atp-binding protein
KHOHDOKI_01688 4.3e-71 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
KHOHDOKI_01689 6.2e-11
KHOHDOKI_01690 3.2e-110
KHOHDOKI_01691 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
KHOHDOKI_01692 1.3e-204 ylbM S Belongs to the UPF0348 family
KHOHDOKI_01693 7.7e-140 yqeM Q Methyltransferase domain protein
KHOHDOKI_01694 6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
KHOHDOKI_01695 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
KHOHDOKI_01696 4.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
KHOHDOKI_01697 3.5e-49 yhbY J RNA-binding protein
KHOHDOKI_01698 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
KHOHDOKI_01699 1.8e-98 yqeG S hydrolase of the HAD superfamily
KHOHDOKI_01700 6.7e-154 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
KHOHDOKI_01701 1.4e-65
KHOHDOKI_01702 7.8e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
KHOHDOKI_01703 1.8e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
KHOHDOKI_01704 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
KHOHDOKI_01705 4.4e-25 2.4.1.52 GT4 M transferase activity, transferring glycosyl groups
KHOHDOKI_01706 7.4e-32 M lipopolysaccharide 3-alpha-galactosyltransferase activity
KHOHDOKI_01707 3.8e-96 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
KHOHDOKI_01708 1.2e-148 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
KHOHDOKI_01709 7.9e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
KHOHDOKI_01710 2.1e-154 hlpA M Belongs to the NlpA lipoprotein family
KHOHDOKI_01711 6.8e-101 pncA Q isochorismatase
KHOHDOKI_01712 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
KHOHDOKI_01713 6.2e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
KHOHDOKI_01714 2.4e-75 XK27_03180 T universal stress protein
KHOHDOKI_01716 2e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
KHOHDOKI_01717 2e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
KHOHDOKI_01718 2.4e-144 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
KHOHDOKI_01719 0.0 yjcE P NhaP-type Na H and K H antiporters
KHOHDOKI_01721 2.4e-98 ytqB 2.1.1.176 J (SAM)-dependent
KHOHDOKI_01722 1.3e-184 yhcC S radical SAM protein
KHOHDOKI_01723 2.2e-196 ylbL T Belongs to the peptidase S16 family
KHOHDOKI_01724 2e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
KHOHDOKI_01725 5.1e-93 rsmD 2.1.1.171 L Methyltransferase
KHOHDOKI_01726 1.9e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
KHOHDOKI_01727 2.8e-08 S Protein of unknown function (DUF4059)
KHOHDOKI_01728 3.4e-132 tcyN 3.6.3.21 E abc transporter atp-binding protein
KHOHDOKI_01729 3.4e-172 yxeN P ABC transporter (Permease
KHOHDOKI_01730 2.6e-149 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
KHOHDOKI_01732 6.5e-204 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
KHOHDOKI_01733 0.0 pflB 2.3.1.54 C formate acetyltransferase'
KHOHDOKI_01734 2.2e-122 cah 4.2.1.1 P carbonic anhydrase
KHOHDOKI_01735 8.4e-37 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
KHOHDOKI_01736 5.6e-33 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
KHOHDOKI_01737 7.1e-44 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
KHOHDOKI_01738 3.4e-32 D nuclear chromosome segregation
KHOHDOKI_01739 4.1e-80 L DNA integration
KHOHDOKI_01740 7.1e-124 XK27_05540 S Gram-negative-bacterium-type cell wall biogenesis
KHOHDOKI_01741 1.5e-127 ybbM S transport system, permease component
KHOHDOKI_01742 2.7e-117 ybbL S abc transporter atp-binding protein
KHOHDOKI_01743 9.2e-26
KHOHDOKI_01744 4.5e-185 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
KHOHDOKI_01745 4.6e-140 cppA E CppA N-terminal
KHOHDOKI_01746 9.4e-183 L Transposase and inactivated derivatives IS30 family
KHOHDOKI_01747 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
KHOHDOKI_01748 1.1e-70 glcR K transcriptional regulator (DeoR family)
KHOHDOKI_01749 1.2e-39 glcR K transcriptional regulator (DeoR family)
KHOHDOKI_01750 3.3e-36 cof Q phosphatase activity
KHOHDOKI_01751 7e-56 cof Q phosphatase activity
KHOHDOKI_01752 6e-85 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
KHOHDOKI_01753 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
KHOHDOKI_01754 7.4e-25 secE U Belongs to the SecE SEC61-gamma family
KHOHDOKI_01755 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
KHOHDOKI_01756 5.6e-166 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
KHOHDOKI_01757 2.7e-28 J TM2 domain
KHOHDOKI_01758 4e-42
KHOHDOKI_01761 4.2e-233 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
KHOHDOKI_01762 3.3e-55 amd 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
KHOHDOKI_01763 9.9e-19 S Domain of unknown function (DUF4649)
KHOHDOKI_01764 2.5e-133 L Transposase
KHOHDOKI_01765 1.9e-13
KHOHDOKI_01766 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
KHOHDOKI_01767 4.9e-142 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
KHOHDOKI_01768 1.5e-135 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
KHOHDOKI_01769 6.6e-61 EGP Major facilitator Superfamily
KHOHDOKI_01770 3.9e-136 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
KHOHDOKI_01771 1.3e-212 pqqE C radical SAM domain protein
KHOHDOKI_01774 2.6e-155 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
KHOHDOKI_01775 9.4e-43 K Cold-Shock Protein
KHOHDOKI_01776 5.4e-32 cspD K Cold shock protein domain
KHOHDOKI_01777 5.8e-41 pepD E dipeptidase activity
KHOHDOKI_01778 2.8e-90 pepD E Dipeptidase
KHOHDOKI_01779 8.7e-162 whiA K May be required for sporulation
KHOHDOKI_01780 9.6e-183 ybhK S Required for morphogenesis under gluconeogenic growth conditions
KHOHDOKI_01781 1.2e-163 rapZ S Displays ATPase and GTPase activities
KHOHDOKI_01782 7.4e-138 yejC S cyclic nucleotide-binding protein
KHOHDOKI_01783 7.7e-20 D nuclear chromosome segregation
KHOHDOKI_01784 6.5e-95 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
KHOHDOKI_01785 2.9e-136 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
KHOHDOKI_01786 2e-82 queD 4.1.2.50, 4.2.3.12 H synthase
KHOHDOKI_01787 4e-124 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
KHOHDOKI_01788 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
KHOHDOKI_01790 1.9e-07
KHOHDOKI_01795 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
KHOHDOKI_01796 8.6e-237 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
KHOHDOKI_01797 5.5e-36 XK27_02060 S Transglycosylase associated protein
KHOHDOKI_01798 2.6e-55 badR K DNA-binding transcription factor activity
KHOHDOKI_01799 3.5e-97 S reductase
KHOHDOKI_01800 5.4e-33 L Integrase core domain protein
KHOHDOKI_01801 6.1e-158 EGP Transmembrane secretion effector
KHOHDOKI_01802 1.5e-33 EGP Transmembrane secretion effector
KHOHDOKI_01803 1.9e-80 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
KHOHDOKI_01804 9e-185 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
KHOHDOKI_01805 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
KHOHDOKI_01806 2.2e-204 oppD P Belongs to the ABC transporter superfamily
KHOHDOKI_01807 4.9e-168 amiD P ABC transporter (Permease
KHOHDOKI_01808 7.4e-26 amiC P ABC transporter (Permease
KHOHDOKI_01809 1.2e-241 amiC P ABC transporter (Permease
KHOHDOKI_01810 0.0 amiA E ABC transporter, substrate-binding protein, family 5
KHOHDOKI_01811 9.1e-30 V CAAX protease self-immunity
KHOHDOKI_01812 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
KHOHDOKI_01813 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
KHOHDOKI_01815 4.9e-87 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
KHOHDOKI_01816 3.1e-53 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
KHOHDOKI_01817 1.8e-153 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
KHOHDOKI_01818 5.2e-62 cysE 2.3.1.30 E serine acetyltransferase
KHOHDOKI_01820 2.5e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
KHOHDOKI_01821 1.1e-16 6.3.2.2 H gamma-glutamylcysteine synthetase
KHOHDOKI_01822 2.1e-111 6.3.2.2 H ergothioneine biosynthetic process
KHOHDOKI_01824 8.2e-165 fba 4.1.2.13, 4.1.2.29 G aldolase
KHOHDOKI_01825 0.0 copB 3.6.3.4 P P-type ATPase
KHOHDOKI_01826 3.4e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
KHOHDOKI_01827 1.4e-195 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
KHOHDOKI_01828 1.2e-165 L integrase core domain
KHOHDOKI_01829 2e-52 L Transposase
KHOHDOKI_01830 2.7e-13 L PFAM Integrase, catalytic core
KHOHDOKI_01831 4e-75 L PFAM Integrase, catalytic core
KHOHDOKI_01832 2.3e-87 L Transposase
KHOHDOKI_01833 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
KHOHDOKI_01834 1e-41 V (ABC) transporter
KHOHDOKI_01835 1.3e-76 V abc transporter atp-binding protein
KHOHDOKI_01836 4.6e-68 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
KHOHDOKI_01837 3e-198 M translation initiation factor activity
KHOHDOKI_01838 1.2e-25 L transposition
KHOHDOKI_01839 7.1e-09 L Integrase core domain protein
KHOHDOKI_01840 2.3e-184 galR K Transcriptional regulator
KHOHDOKI_01841 2.8e-221 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
KHOHDOKI_01842 1.6e-293 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
KHOHDOKI_01843 1.1e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
KHOHDOKI_01844 3.4e-202 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
KHOHDOKI_01845 0.0 lacS G transporter
KHOHDOKI_01846 0.0 lacL 3.2.1.23 G -beta-galactosidase
KHOHDOKI_01847 6.9e-231 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
KHOHDOKI_01848 0.0 sbcC L ATPase involved in DNA repair
KHOHDOKI_01850 7.6e-19
KHOHDOKI_01851 0.0 M family 8
KHOHDOKI_01852 2.7e-09
KHOHDOKI_01853 5.6e-08
KHOHDOKI_01854 5.8e-109 MA20_06410 E LysE type translocator
KHOHDOKI_01855 2.7e-12 IQ PFAM AMP-dependent synthetase and ligase
KHOHDOKI_01856 5.3e-12 IQ PFAM AMP-dependent synthetase and ligase
KHOHDOKI_01857 1.5e-95
KHOHDOKI_01858 1.8e-270 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
KHOHDOKI_01859 7.6e-61
KHOHDOKI_01861 1.3e-68 S Signal peptide protein, YSIRK family
KHOHDOKI_01862 2.4e-54 K response regulator
KHOHDOKI_01863 1.1e-37 BP1961 P nitric oxide dioxygenase activity
KHOHDOKI_01865 1.1e-283 XK27_07020 S Belongs to the UPF0371 family
KHOHDOKI_01866 2.7e-123 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
KHOHDOKI_01867 0.0 L DEAD-like helicases superfamily
KHOHDOKI_01868 3.1e-115 S Abortive infection C-terminus
KHOHDOKI_01869 2.4e-09
KHOHDOKI_01870 1.1e-55 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
KHOHDOKI_01871 1.2e-160 yvgN C reductase
KHOHDOKI_01873 3.5e-87 yoaK S Protein of unknown function (DUF1275)
KHOHDOKI_01874 1.7e-111 drgA C Nitroreductase
KHOHDOKI_01875 1.2e-233 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
KHOHDOKI_01876 1.9e-158 E Alpha/beta hydrolase of unknown function (DUF915)
KHOHDOKI_01877 5.6e-77 ywnA K Transcriptional regulator
KHOHDOKI_01878 2.2e-90 1.13.11.2 S glyoxalase
KHOHDOKI_01879 2.5e-109 XK27_02070 S nitroreductase
KHOHDOKI_01880 6.2e-228 yfnA E amino acid
KHOHDOKI_01881 9.6e-26 csbD K CsbD-like
KHOHDOKI_01882 2e-49 manA 5.3.1.8 G mannose-6-phosphate isomerase
KHOHDOKI_01883 1e-66 manA 5.3.1.8 G mannose-6-phosphate isomerase
KHOHDOKI_01884 1.6e-233 brnQ E Component of the transport system for branched-chain amino acids
KHOHDOKI_01885 3e-183 hipO E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
KHOHDOKI_01886 3.2e-07 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
KHOHDOKI_01887 3.4e-50 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
KHOHDOKI_01888 6.7e-42 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
KHOHDOKI_01889 1.1e-148 ykrV3 2.6.1.83 E mutations do not affect methionine salvage in vivo however
KHOHDOKI_01890 3e-115 yxeQ S MmgE/PrpD family
KHOHDOKI_01891 1.5e-44 yxeL K Acetyltransferase (GNAT) domain
KHOHDOKI_01892 4.1e-63 yxeN U ABC transporter, permease protein
KHOHDOKI_01893 7.3e-93 yxeO 3.6.3.21 E abc transporter atp-binding protein
KHOHDOKI_01894 2.9e-198 pcaB 4.3.2.2 F Adenylosuccinate lyase
KHOHDOKI_01895 2.9e-84 yxeM ET Belongs to the bacterial solute-binding protein 3 family
KHOHDOKI_01896 9.7e-188 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
KHOHDOKI_01897 2.9e-246 norM V Multidrug efflux pump
KHOHDOKI_01898 6e-36 pbuX F xanthine permease
KHOHDOKI_01899 1.3e-77 pbuX F xanthine permease
KHOHDOKI_01900 1.4e-74 pbuX F xanthine permease
KHOHDOKI_01901 5.1e-67 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
KHOHDOKI_01902 2.4e-124 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
KHOHDOKI_01903 3.1e-165 T Histidine kinase
KHOHDOKI_01904 1.9e-133 macB2 V ABC transporter, ATP-binding protein
KHOHDOKI_01905 0.0 V ABC transporter (permease)
KHOHDOKI_01906 2.9e-34 XK27_05000 S metal cluster binding
KHOHDOKI_01907 2.4e-80 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
KHOHDOKI_01908 1.8e-165 yocS S Transporter
KHOHDOKI_01911 2.3e-159 XK27_09825 V abc transporter atp-binding protein
KHOHDOKI_01912 4.8e-134 yvfS V ABC-2 type transporter
KHOHDOKI_01913 2.5e-187 desK 2.7.13.3 T Histidine kinase
KHOHDOKI_01914 6.1e-103 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
KHOHDOKI_01915 6.6e-99 S transport system, permease component
KHOHDOKI_01916 4.1e-34 S transport system, permease component
KHOHDOKI_01917 2.9e-145 S ABC-2 family transporter protein
KHOHDOKI_01918 3.3e-26
KHOHDOKI_01919 1.6e-149 sdaAA 4.3.1.17 E L-serine dehydratase
KHOHDOKI_01920 3.8e-122 sdaAB 4.3.1.17 E L-serine dehydratase
KHOHDOKI_01921 0.0 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
KHOHDOKI_01922 5.4e-206 S Protein of unknown function (DUF917)
KHOHDOKI_01923 1.4e-281 hutH 4.3.1.3 E Histidine ammonia-lyase
KHOHDOKI_01924 1.7e-111 proWZ P ABC transporter (Permease
KHOHDOKI_01925 2e-169 proX M ABC transporter, substrate-binding protein, QAT family
KHOHDOKI_01926 1.5e-138 proV E abc transporter atp-binding protein
KHOHDOKI_01927 3.6e-90 proW P Binding-protein-dependent transport system inner membrane component
KHOHDOKI_01928 4e-64 bioY S biotin transmembrane transporter activity
KHOHDOKI_01929 3.2e-70 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
KHOHDOKI_01930 7.9e-38 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
KHOHDOKI_01931 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
KHOHDOKI_01932 6.8e-242 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)