ORF_ID e_value Gene_name EC_number CAZy COGs Description
NDHIOOII_00001 5.1e-25 S Bacteriophage holin of superfamily 6 (Holin_LLH)
NDHIOOII_00003 2.7e-40
NDHIOOII_00006 1.3e-64 G cellulose 1,4-beta-cellobiosidase activity
NDHIOOII_00007 4.6e-23
NDHIOOII_00008 1.5e-119 Z012_12235 S Baseplate J-like protein
NDHIOOII_00009 3.7e-09 S Protein of unknown function (DUF2634)
NDHIOOII_00010 4.3e-27
NDHIOOII_00011 3.2e-89
NDHIOOII_00012 6.7e-35
NDHIOOII_00013 7e-53 3.5.1.28 M LysM domain
NDHIOOII_00014 4.5e-29
NDHIOOII_00016 2.2e-14
NDHIOOII_00017 1e-37
NDHIOOII_00018 1.3e-103 Z012_02110 S Protein of unknown function (DUF3383)
NDHIOOII_00019 3.7e-23
NDHIOOII_00021 6.2e-49 Z012_02125
NDHIOOII_00022 6.7e-30
NDHIOOII_00023 1.2e-18
NDHIOOII_00024 1.8e-120
NDHIOOII_00025 2.3e-31 S Domain of unknown function (DUF4355)
NDHIOOII_00027 5.6e-91
NDHIOOII_00028 3.7e-183 S Phage portal protein, SPP1 Gp6-like
NDHIOOII_00029 1.4e-189 S Terminase-like family
NDHIOOII_00030 3e-76 xtmA L Terminase small subunit
NDHIOOII_00031 1.2e-19
NDHIOOII_00034 1.5e-11
NDHIOOII_00037 7e-29 rusA L Endodeoxyribonuclease RusA
NDHIOOII_00039 6e-22 S Mazg nucleotide pyrophosphohydrolase
NDHIOOII_00040 4.5e-23
NDHIOOII_00043 5.6e-29 S HNH endonuclease
NDHIOOII_00051 1.3e-52 dnaC 3.4.21.53 L IstB-like ATP binding protein
NDHIOOII_00052 8e-58 S calcium ion binding
NDHIOOII_00053 1.2e-43 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NDHIOOII_00054 2.4e-92 S Putative HNHc nuclease
NDHIOOII_00055 9.1e-43 S ERF superfamily
NDHIOOII_00056 1.4e-11 S Bacteriophage Mu Gam like protein
NDHIOOII_00059 3.9e-107 wecD3 K PFAM GCN5-related N-acetyltransferase
NDHIOOII_00060 2.6e-285 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NDHIOOII_00061 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
NDHIOOII_00062 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
NDHIOOII_00063 1.5e-172 malR K Transcriptional regulator, LacI family
NDHIOOII_00064 8.8e-215 phbA 2.3.1.9 I Belongs to the thiolase family
NDHIOOII_00065 1.1e-256 malT G Major Facilitator
NDHIOOII_00066 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
NDHIOOII_00067 5.4e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
NDHIOOII_00068 1.4e-38 psiE S Phosphate-starvation-inducible E
NDHIOOII_00069 2.8e-99 ydeN S Serine hydrolase
NDHIOOII_00071 2e-183 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NDHIOOII_00072 8.9e-254 nhaC C Na H antiporter NhaC
NDHIOOII_00073 1.6e-38 S Cytochrome b5-like Heme/Steroid binding domain
NDHIOOII_00074 7.5e-115 ywnB S NAD(P)H-binding
NDHIOOII_00075 1.3e-37
NDHIOOII_00076 1.4e-130 IQ Dehydrogenase reductase
NDHIOOII_00077 3.4e-115 M protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes
NDHIOOII_00078 3.3e-132 M protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes
NDHIOOII_00079 2.7e-277 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
NDHIOOII_00080 1.2e-272 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
NDHIOOII_00081 2.2e-72
NDHIOOII_00082 3.3e-77 K Transcriptional regulator, TetR family
NDHIOOII_00083 4.5e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NDHIOOII_00084 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NDHIOOII_00085 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
NDHIOOII_00086 2e-180 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
NDHIOOII_00087 0.0 pepO 3.4.24.71 O Peptidase family M13
NDHIOOII_00088 3.6e-48
NDHIOOII_00089 3e-232 S Putative metallopeptidase domain
NDHIOOII_00090 4.3e-206 3.1.3.1 S associated with various cellular activities
NDHIOOII_00091 7.5e-120 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
NDHIOOII_00092 5.8e-64 yeaO S Protein of unknown function, DUF488
NDHIOOII_00093 6.6e-98 wecD3 K PFAM GCN5-related N-acetyltransferase
NDHIOOII_00094 9.1e-204 cytX U Belongs to the purine-cytosine permease (2.A.39) family
NDHIOOII_00095 4.3e-13
NDHIOOII_00096 1.4e-77 S Domain of unknown function (DUF4767)
NDHIOOII_00097 2.8e-196 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
NDHIOOII_00098 4.1e-115 S Membrane
NDHIOOII_00099 2.1e-123 O Zinc-dependent metalloprotease
NDHIOOII_00100 1.4e-178 S Aldo keto reductase
NDHIOOII_00101 4.6e-72 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
NDHIOOII_00102 0.0 L Helicase C-terminal domain protein
NDHIOOII_00104 5e-246 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
NDHIOOII_00105 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NDHIOOII_00106 4.4e-77 ctsR K Belongs to the CtsR family
NDHIOOII_00107 2.1e-196 adhP 1.1.1.1 C alcohol dehydrogenase
NDHIOOII_00108 4.1e-178 S Hydrolases of the alpha beta superfamily
NDHIOOII_00114 2.4e-102
NDHIOOII_00115 1.2e-216 yttB EGP Major facilitator Superfamily
NDHIOOII_00116 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
NDHIOOII_00117 1e-87
NDHIOOII_00118 9.3e-110 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
NDHIOOII_00119 7.6e-219 S Putative peptidoglycan binding domain
NDHIOOII_00120 6.5e-218 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
NDHIOOII_00121 3.9e-12
NDHIOOII_00122 7.4e-155 P Belongs to the nlpA lipoprotein family
NDHIOOII_00123 4.7e-99 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NDHIOOII_00124 3.7e-51 S Iron-sulfur cluster assembly protein
NDHIOOII_00125 4.8e-149
NDHIOOII_00126 5.4e-176
NDHIOOII_00127 4.2e-89 dut S Protein conserved in bacteria
NDHIOOII_00128 1.1e-169 N Uncharacterized conserved protein (DUF2075)
NDHIOOII_00129 8.8e-122 S SNARE associated Golgi protein
NDHIOOII_00130 0.0 uvrA3 L excinuclease ABC, A subunit
NDHIOOII_00131 4.5e-55 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NDHIOOII_00132 1.3e-58 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NDHIOOII_00133 8.3e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NDHIOOII_00134 5e-131 S DUF218 domain
NDHIOOII_00135 1.3e-119 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NDHIOOII_00136 1.6e-202 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NDHIOOII_00137 6.1e-141 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
NDHIOOII_00138 5e-254 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
NDHIOOII_00139 3.4e-225 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NDHIOOII_00140 9.4e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
NDHIOOII_00141 3.2e-40 yggT S YGGT family
NDHIOOII_00142 1.3e-145 ylmH S S4 domain protein
NDHIOOII_00143 1.6e-36 divIVA D DivIVA domain protein
NDHIOOII_00144 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NDHIOOII_00145 4.2e-32 cspA K Cold shock protein
NDHIOOII_00146 1.8e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
NDHIOOII_00148 1e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NDHIOOII_00149 4.6e-216 iscS 2.8.1.7 E Aminotransferase class V
NDHIOOII_00150 2.2e-57 XK27_04120 S Putative amino acid metabolism
NDHIOOII_00151 1.5e-224 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
NDHIOOII_00152 4.9e-122 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
NDHIOOII_00153 9e-119 S Repeat protein
NDHIOOII_00154 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
NDHIOOII_00155 9e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NDHIOOII_00156 5.3e-46 glnH ET ABC transporter
NDHIOOII_00157 3.2e-110 gluC P ABC transporter permease
NDHIOOII_00158 1.4e-108 glnP P ABC transporter permease
NDHIOOII_00159 1e-218 S CAAX protease self-immunity
NDHIOOII_00160 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NDHIOOII_00161 9.3e-56
NDHIOOII_00162 3.4e-74 merR K MerR HTH family regulatory protein
NDHIOOII_00163 9.8e-261 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
NDHIOOII_00164 0.0 araB 2.7.1.16 G carbohydrate kinase FGGY
NDHIOOII_00165 1.8e-138 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
NDHIOOII_00166 2.2e-284 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
NDHIOOII_00167 2e-92 maa 2.3.1.79 S Maltose O-acetyltransferase
NDHIOOII_00169 1.5e-181 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
NDHIOOII_00170 5.9e-160 rrmA 2.1.1.187 H Methyltransferase
NDHIOOII_00171 4.7e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NDHIOOII_00172 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
NDHIOOII_00173 1.2e-10 S Protein of unknown function (DUF4044)
NDHIOOII_00174 5e-80 Q Methyltransferase
NDHIOOII_00175 1.4e-116 ktrA P domain protein
NDHIOOII_00176 1e-238 ktrB P Potassium uptake protein
NDHIOOII_00177 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
NDHIOOII_00178 1.3e-137 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
NDHIOOII_00179 3e-27 yphJ 4.1.1.44 S decarboxylase
NDHIOOII_00180 2e-09 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
NDHIOOII_00181 1.1e-114 P nitric oxide dioxygenase activity
NDHIOOII_00182 8.3e-106 S Peptidase propeptide and YPEB domain
NDHIOOII_00183 6.2e-233 T GHKL domain
NDHIOOII_00184 2.8e-120 T Transcriptional regulatory protein, C terminal
NDHIOOII_00185 5.5e-153 yjbQ P TrkA C-terminal domain protein
NDHIOOII_00186 1e-24 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
NDHIOOII_00187 1.5e-291 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NDHIOOII_00188 2e-83
NDHIOOII_00189 3.9e-37
NDHIOOII_00190 2.9e-102 K DNA-templated transcription, initiation
NDHIOOII_00191 4.5e-66
NDHIOOII_00192 7.4e-65 K Transcriptional regulator, HxlR family
NDHIOOII_00193 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NDHIOOII_00194 2.3e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NDHIOOII_00195 6.7e-59 yodB K Transcriptional regulator, HxlR family
NDHIOOII_00196 2e-91 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
NDHIOOII_00197 2.2e-145 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NDHIOOII_00198 2.5e-155 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
NDHIOOII_00199 1e-159 S AI-2E family transporter
NDHIOOII_00200 8e-134 XK27_07210 6.1.1.6 S B3 4 domain
NDHIOOII_00201 6.6e-78 yybA 2.3.1.57 K Transcriptional regulator
NDHIOOII_00202 4e-90 M1-874 K Domain of unknown function (DUF1836)
NDHIOOII_00203 6.7e-90 GM epimerase
NDHIOOII_00204 5.7e-155 ypdB V (ABC) transporter
NDHIOOII_00205 5.5e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NDHIOOII_00206 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NDHIOOII_00208 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NDHIOOII_00209 0.0 uup S ABC transporter, ATP-binding protein
NDHIOOII_00210 1.4e-256 pepC 3.4.22.40 E aminopeptidase
NDHIOOII_00211 3.8e-210 EGP Major facilitator Superfamily
NDHIOOII_00212 2.6e-231
NDHIOOII_00213 1.2e-82 K Transcriptional regulator, HxlR family
NDHIOOII_00214 3.7e-108 XK27_02070 S Nitroreductase family
NDHIOOII_00215 2.8e-51 hxlR K Transcriptional regulator, HxlR family
NDHIOOII_00216 1.4e-158 lutA C Cysteine-rich domain
NDHIOOII_00217 1.9e-294 lutB C 4Fe-4S dicluster domain
NDHIOOII_00218 2.4e-138 yrjD S LUD domain
NDHIOOII_00219 1.1e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
NDHIOOII_00220 2.5e-181 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
NDHIOOII_00221 1.2e-154 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NDHIOOII_00222 4.6e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
NDHIOOII_00223 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
NDHIOOII_00224 2.2e-30 KT PspC domain protein
NDHIOOII_00225 6.6e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NDHIOOII_00226 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NDHIOOII_00227 4.5e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NDHIOOII_00228 1.7e-122 comFC S Competence protein
NDHIOOII_00229 1.6e-249 comFA L Helicase C-terminal domain protein
NDHIOOII_00230 1.2e-109 yvyE 3.4.13.9 S YigZ family
NDHIOOII_00231 2e-37 EGP Major facilitator Superfamily
NDHIOOII_00232 2.3e-156 EGP Major facilitator Superfamily
NDHIOOII_00233 1.7e-67 rmaI K Transcriptional regulator
NDHIOOII_00234 1.3e-38
NDHIOOII_00235 0.0 ydaO E amino acid
NDHIOOII_00236 8.6e-201 ybeC E amino acid
NDHIOOII_00237 3e-159 dprA LU DNA protecting protein DprA
NDHIOOII_00238 6.5e-142 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NDHIOOII_00239 8.4e-162 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NDHIOOII_00240 4.4e-35 yozE S Belongs to the UPF0346 family
NDHIOOII_00241 3.7e-108 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
NDHIOOII_00242 3.4e-169 ypmR E lipolytic protein G-D-S-L family
NDHIOOII_00243 4.4e-152 DegV S EDD domain protein, DegV family
NDHIOOII_00244 0.0 S membrane
NDHIOOII_00245 1.6e-67 yneR S Belongs to the HesB IscA family
NDHIOOII_00246 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NDHIOOII_00247 4.7e-117 udk 2.7.1.48 F Cytidine monophosphokinase
NDHIOOII_00248 4.3e-115 rlpA M PFAM NLP P60 protein
NDHIOOII_00249 2.4e-12 pgdA 3.5.1.104 G polysaccharide deacetylase
NDHIOOII_00250 7.1e-19 pgdA 3.5.1.104 G polysaccharide deacetylase
NDHIOOII_00251 0.0 3.2.1.55 GH51 G Right handed beta helix region
NDHIOOII_00252 1.6e-290 xynT G MFS/sugar transport protein
NDHIOOII_00253 9.5e-172 rhaS2 K Transcriptional regulator, AraC family
NDHIOOII_00254 2.4e-223 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
NDHIOOII_00255 0.0 yfmR S ABC transporter, ATP-binding protein
NDHIOOII_00256 3.2e-191 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NDHIOOII_00257 1.1e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NDHIOOII_00258 1.2e-112 hlyIII S protein, hemolysin III
NDHIOOII_00259 4.7e-57 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
NDHIOOII_00260 3.9e-147 cps1D M Domain of unknown function (DUF4422)
NDHIOOII_00261 4.8e-140 recX 2.4.1.337 GT4 S Regulatory protein RecX
NDHIOOII_00262 4.9e-31
NDHIOOII_00263 3.9e-34 S Protein of unknown function (DUF2922)
NDHIOOII_00264 1.8e-151 yihY S Belongs to the UPF0761 family
NDHIOOII_00265 1.1e-275 yjeM E Amino Acid
NDHIOOII_00266 1.7e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
NDHIOOII_00267 7.8e-100 ypsA S Belongs to the UPF0398 family
NDHIOOII_00268 1.3e-116 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
NDHIOOII_00269 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
NDHIOOII_00270 1.5e-115 EG EamA-like transporter family
NDHIOOII_00271 1.2e-31 feoA P FeoA domain
NDHIOOII_00272 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
NDHIOOII_00273 1e-270 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
NDHIOOII_00274 6.5e-156 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NDHIOOII_00275 1.2e-64 ydiI Q Thioesterase superfamily
NDHIOOII_00276 5.2e-150
NDHIOOII_00277 1.3e-216 L Transposase
NDHIOOII_00278 1.2e-97 2.3.1.128 K acetyltransferase
NDHIOOII_00279 6.9e-184
NDHIOOII_00280 2.2e-16 K Transcriptional regulator, HxlR family
NDHIOOII_00281 2.8e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NDHIOOII_00282 3.8e-61 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
NDHIOOII_00283 6e-69 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NDHIOOII_00284 5.3e-184 phoH T phosphate starvation-inducible protein PhoH
NDHIOOII_00285 5.3e-173 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
NDHIOOII_00286 1.6e-83 bioY S BioY family
NDHIOOII_00287 4.8e-30 S sequence-specific DNA binding transcription factor activity
NDHIOOII_00288 6.5e-94 S peptidoglycan catabolic process
NDHIOOII_00289 5.6e-73 V Restriction endonuclease
NDHIOOII_00290 2.9e-13
NDHIOOII_00292 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
NDHIOOII_00293 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NDHIOOII_00294 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
NDHIOOII_00295 2.2e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NDHIOOII_00296 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NDHIOOII_00297 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NDHIOOII_00298 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NDHIOOII_00299 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NDHIOOII_00300 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NDHIOOII_00301 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
NDHIOOII_00302 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NDHIOOII_00303 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NDHIOOII_00304 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NDHIOOII_00305 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NDHIOOII_00306 4e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NDHIOOII_00307 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NDHIOOII_00308 4.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NDHIOOII_00309 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NDHIOOII_00310 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NDHIOOII_00311 2.9e-24 rpmD J Ribosomal protein L30
NDHIOOII_00312 8.9e-64 rplO J Binds to the 23S rRNA
NDHIOOII_00313 8.8e-240 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NDHIOOII_00314 8.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NDHIOOII_00315 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NDHIOOII_00316 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
NDHIOOII_00317 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NDHIOOII_00318 3.4e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NDHIOOII_00319 2.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NDHIOOII_00320 1.1e-62 rplQ J Ribosomal protein L17
NDHIOOII_00321 1.9e-147 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NDHIOOII_00322 4.1e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NDHIOOII_00323 3.4e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NDHIOOII_00324 1.4e-141 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NDHIOOII_00325 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NDHIOOII_00326 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
NDHIOOII_00327 6.1e-140 IQ reductase
NDHIOOII_00328 1.4e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NDHIOOII_00329 8.8e-265 glnP P ABC transporter
NDHIOOII_00330 3.8e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NDHIOOII_00331 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NDHIOOII_00332 4.1e-74 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NDHIOOII_00333 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NDHIOOII_00334 2.4e-95 K Acetyltransferase (GNAT) domain
NDHIOOII_00335 2.7e-296 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
NDHIOOII_00336 1.4e-17 gntT EG Gluconate
NDHIOOII_00337 9.1e-201 gntT EG Gluconate
NDHIOOII_00338 3.4e-183 K Transcriptional regulator, LacI family
NDHIOOII_00339 9.5e-283 G Peptidase_C39 like family
NDHIOOII_00340 6.1e-25
NDHIOOII_00341 1.3e-215 glf 5.4.99.9 M UDP-galactopyranose mutase
NDHIOOII_00342 7.2e-211 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
NDHIOOII_00343 3.2e-214 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
NDHIOOII_00344 4.1e-103 metI P ABC transporter permease
NDHIOOII_00345 1.5e-192 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NDHIOOII_00346 2.5e-155 metQ1 P Belongs to the nlpA lipoprotein family
NDHIOOII_00347 2.5e-138 S Membrane
NDHIOOII_00348 6.8e-74 4.4.1.5 E Glyoxalase
NDHIOOII_00349 1.6e-21
NDHIOOII_00350 7.4e-75 yueI S Protein of unknown function (DUF1694)
NDHIOOII_00351 2.1e-241 rarA L recombination factor protein RarA
NDHIOOII_00352 5.7e-46
NDHIOOII_00353 4.3e-83 usp6 T universal stress protein
NDHIOOII_00354 4.6e-58 M transferase activity, transferring glycosyl groups
NDHIOOII_00355 2.2e-88 cps3F
NDHIOOII_00356 3e-28 M biosynthesis protein
NDHIOOII_00357 9.9e-76 rgpB GT2 M Glycosyl transferase family 2
NDHIOOII_00358 3.4e-66 S Glycosyltransferase like family
NDHIOOII_00359 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
NDHIOOII_00360 7.5e-58 ytzB S Small secreted protein
NDHIOOII_00361 9.7e-169 glsA 3.5.1.2 E Belongs to the glutaminase family
NDHIOOII_00362 3.1e-181 iolS C Aldo keto reductase
NDHIOOII_00363 7.9e-253 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
NDHIOOII_00364 3e-15 A chlorophyll binding
NDHIOOII_00365 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
NDHIOOII_00366 1.5e-172 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
NDHIOOII_00367 1.2e-133 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
NDHIOOII_00368 2.2e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NDHIOOII_00369 8.2e-210 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NDHIOOII_00370 3.2e-62 L Toxic component of a toxin-antitoxin (TA) module
NDHIOOII_00371 2.6e-250 U Belongs to the purine-cytosine permease (2.A.39) family
NDHIOOII_00372 4e-242 codA 3.5.4.1 F cytosine deaminase
NDHIOOII_00373 8.3e-202 hpk31 2.7.13.3 T Histidine kinase
NDHIOOII_00374 3.8e-125 K response regulator
NDHIOOII_00375 4.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NDHIOOII_00376 4.8e-171 deoR K sugar-binding domain protein
NDHIOOII_00377 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
NDHIOOII_00378 1.7e-235 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
NDHIOOII_00379 4.1e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
NDHIOOII_00380 3.7e-117 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NDHIOOII_00381 3.1e-136 XK27_01040 S Protein of unknown function (DUF1129)
NDHIOOII_00382 8.8e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NDHIOOII_00383 2e-31 yyzM S Bacterial protein of unknown function (DUF951)
NDHIOOII_00384 1.3e-154 spo0J K Belongs to the ParB family
NDHIOOII_00385 1.8e-139 soj D Sporulation initiation inhibitor
NDHIOOII_00386 4.9e-147 noc K Belongs to the ParB family
NDHIOOII_00387 6.1e-126 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
NDHIOOII_00388 7.2e-161 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
NDHIOOII_00389 6.6e-170 rihC 3.2.2.1 F Nucleoside
NDHIOOII_00390 1e-218 nupG F Nucleoside transporter
NDHIOOII_00391 8.5e-185 comP 2.7.13.3 F Sensor histidine kinase
NDHIOOII_00392 8.8e-44
NDHIOOII_00393 6.4e-94 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
NDHIOOII_00394 2.8e-74 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
NDHIOOII_00395 3.5e-222 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
NDHIOOII_00396 3.9e-79 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
NDHIOOII_00397 2.3e-54 moeB 2.7.7.73, 2.7.7.80 H ThiF family
NDHIOOII_00398 5.2e-110 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
NDHIOOII_00399 1e-119 rfbP 2.7.8.6 M Bacterial sugar transferase
NDHIOOII_00400 0.0 2.7.7.6 M Peptidase family M23
NDHIOOII_00401 3.1e-167 L restriction endonuclease
NDHIOOII_00402 4.6e-94 mrr L restriction endonuclease
NDHIOOII_00403 0.0 L PLD-like domain
NDHIOOII_00405 1.9e-180 yfeX P Peroxidase
NDHIOOII_00406 2.8e-170 lsa S ABC transporter
NDHIOOII_00407 3.5e-134 I alpha/beta hydrolase fold
NDHIOOII_00408 3.4e-203 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
NDHIOOII_00409 1.9e-161 aatB ET PFAM extracellular solute-binding protein, family 3
NDHIOOII_00410 7.2e-89 ykhA 3.1.2.20 I Thioesterase superfamily
NDHIOOII_00411 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
NDHIOOII_00412 3.8e-145 S Bifunctional DNA primase/polymerase, N-terminal
NDHIOOII_00413 1.7e-93
NDHIOOII_00414 9.3e-141 L AAA domain
NDHIOOII_00415 2e-258 res L Helicase C-terminal domain protein
NDHIOOII_00417 2.8e-09
NDHIOOII_00418 1.2e-105 fliC N bacterial-type flagellum-dependent cell motility
NDHIOOII_00419 1.1e-67
NDHIOOII_00420 4.9e-262 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
NDHIOOII_00421 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
NDHIOOII_00422 2.3e-136 S Belongs to the UPF0246 family
NDHIOOII_00423 7.7e-85 F Belongs to the NrdI family
NDHIOOII_00424 1.5e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
NDHIOOII_00425 1.8e-71 rnhA 3.1.26.4 L Ribonuclease HI
NDHIOOII_00426 1.5e-65 esbA S Family of unknown function (DUF5322)
NDHIOOII_00427 7e-72 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NDHIOOII_00428 4.5e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
NDHIOOII_00429 1.7e-153 tesE Q hydratase
NDHIOOII_00430 3.8e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
NDHIOOII_00431 1.7e-226 aadAT EK Aminotransferase, class I
NDHIOOII_00432 3e-155 ypuA S Protein of unknown function (DUF1002)
NDHIOOII_00433 3e-229 cinA 3.5.1.42 S Belongs to the CinA family
NDHIOOII_00434 7.6e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NDHIOOII_00435 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
NDHIOOII_00436 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NDHIOOII_00437 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NDHIOOII_00438 8.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NDHIOOII_00439 1e-190 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NDHIOOII_00440 6.1e-194 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NDHIOOII_00441 2.8e-31 yajC U Preprotein translocase
NDHIOOII_00442 2.3e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
NDHIOOII_00443 3.7e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
NDHIOOII_00444 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NDHIOOII_00447 3.6e-71
NDHIOOII_00449 0.0 S Bacterial membrane protein YfhO
NDHIOOII_00450 2.3e-104 T Ion transport 2 domain protein
NDHIOOII_00451 3.8e-176 rihA F Inosine-uridine preferring nucleoside hydrolase
NDHIOOII_00453 7.3e-212 bacI V MacB-like periplasmic core domain
NDHIOOII_00454 1.3e-128 V ABC transporter
NDHIOOII_00455 2.2e-143 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NDHIOOII_00456 2.9e-243 M Glycosyl transferase family group 2
NDHIOOII_00457 6.9e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NDHIOOII_00458 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NDHIOOII_00459 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NDHIOOII_00460 3.4e-48
NDHIOOII_00462 1.3e-232 yhdP S Transporter associated domain
NDHIOOII_00463 5e-75 copY K Copper transport repressor CopY TcrY
NDHIOOII_00464 3.3e-245 EGP Major facilitator Superfamily
NDHIOOII_00465 4.5e-74 yeaL S UPF0756 membrane protein
NDHIOOII_00466 2e-38 yphH S Cupin domain
NDHIOOII_00467 3.3e-137 azlC E AzlC protein
NDHIOOII_00468 3.6e-52 azlD S branched-chain amino acid
NDHIOOII_00469 1.3e-133 K LysR substrate binding domain
NDHIOOII_00470 3.9e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
NDHIOOII_00471 2.7e-146 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NDHIOOII_00472 1.3e-14 IQ KR domain
NDHIOOII_00473 3.1e-25
NDHIOOII_00474 8e-53 yhaI S Protein of unknown function (DUF805)
NDHIOOII_00475 5e-44
NDHIOOII_00476 3.5e-222 ftsW D Belongs to the SEDS family
NDHIOOII_00477 3.9e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
NDHIOOII_00478 8.5e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
NDHIOOII_00479 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NDHIOOII_00480 4.6e-199 ylbL T Belongs to the peptidase S16 family
NDHIOOII_00481 3.8e-79 comEA L Competence protein ComEA
NDHIOOII_00482 5.4e-181 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NDHIOOII_00483 1.3e-219 V domain protein
NDHIOOII_00484 3e-37 K Transcriptional regulator (TetR family)
NDHIOOII_00485 6.1e-79 fld C Flavodoxin
NDHIOOII_00486 3.5e-165 map 3.4.11.18 E Methionine Aminopeptidase
NDHIOOII_00487 1.3e-220 arcT 2.6.1.1 E Aminotransferase
NDHIOOII_00488 5.6e-256 E Arginine ornithine antiporter
NDHIOOII_00489 8e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NDHIOOII_00490 4.6e-41 rpmE2 J Ribosomal protein L31
NDHIOOII_00491 6.1e-241 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NDHIOOII_00492 2.7e-168 S Alpha/beta hydrolase of unknown function (DUF915)
NDHIOOII_00493 8.6e-125 srtA 3.4.22.70 M sortase family
NDHIOOII_00494 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
NDHIOOII_00495 2.1e-159 3.2.1.55 GH51 G Right handed beta helix region
NDHIOOII_00496 2e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NDHIOOII_00497 1.2e-163 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
NDHIOOII_00498 3.9e-119 pgm3 G Belongs to the phosphoglycerate mutase family
NDHIOOII_00499 5.2e-86 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NDHIOOII_00500 7e-93 lemA S LemA family
NDHIOOII_00501 1.5e-158 htpX O Belongs to the peptidase M48B family
NDHIOOII_00502 1.8e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NDHIOOII_00503 1.4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
NDHIOOII_00504 2.3e-48 sugE U Multidrug resistance protein
NDHIOOII_00505 6.3e-61 S Protein of unknown function (DUF3021)
NDHIOOII_00506 1.4e-75 K LytTr DNA-binding domain
NDHIOOII_00507 3.7e-146 cylB V ABC-2 type transporter
NDHIOOII_00508 1.8e-153 cylA V ABC transporter
NDHIOOII_00509 5.7e-52
NDHIOOII_00510 1.1e-158 pstS P Phosphate
NDHIOOII_00511 6.6e-154 pstC P probably responsible for the translocation of the substrate across the membrane
NDHIOOII_00512 6.5e-154 pstA P Phosphate transport system permease protein PstA
NDHIOOII_00513 1.1e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NDHIOOII_00514 6.6e-125 phoU P Plays a role in the regulation of phosphate uptake
NDHIOOII_00515 1.2e-88
NDHIOOII_00518 7.6e-224 brpA K Cell envelope-like function transcriptional attenuator common domain protein
NDHIOOII_00519 3.3e-163 yueF S AI-2E family transporter
NDHIOOII_00520 6e-285 csd1 3.5.1.28 G domain, Protein
NDHIOOII_00521 4.8e-38 S Protein of unknown function (DUF2508)
NDHIOOII_00522 9.6e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NDHIOOII_00523 7.6e-52 yaaQ S Cyclic-di-AMP receptor
NDHIOOII_00524 8.2e-185 holB 2.7.7.7 L DNA polymerase III
NDHIOOII_00525 1.6e-58 yabA L Involved in initiation control of chromosome replication
NDHIOOII_00526 6.2e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NDHIOOII_00527 2e-112 fat 3.1.2.21 I Acyl-ACP thioesterase
NDHIOOII_00528 1.4e-121 GM NmrA-like family
NDHIOOII_00529 7.8e-76 elaA S Gnat family
NDHIOOII_00530 1.8e-39 S Cytochrome B5
NDHIOOII_00531 5.4e-09 S Cytochrome B5
NDHIOOII_00532 1.6e-41 S Cytochrome B5
NDHIOOII_00533 1.4e-209 yxjG_1 E methionine synthase, vitamin-B12 independent
NDHIOOII_00536 4.4e-31 S Transglycosylase associated protein
NDHIOOII_00537 3.1e-10
NDHIOOII_00538 2.4e-226 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NDHIOOII_00539 1.5e-126 3.1.3.73 G phosphoglycerate mutase
NDHIOOII_00540 3.4e-115 dedA S SNARE associated Golgi protein
NDHIOOII_00541 6.8e-171 pbuG S permease
NDHIOOII_00542 3.8e-281 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
NDHIOOII_00543 8.9e-284 gadC E amino acid
NDHIOOII_00544 0.0 FbpA K Fibronectin-binding protein
NDHIOOII_00545 5.5e-161 degV S EDD domain protein, DegV family
NDHIOOII_00546 9.4e-94
NDHIOOII_00547 4e-104 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
NDHIOOII_00548 1.6e-279 O Arylsulfotransferase (ASST)
NDHIOOII_00549 4.7e-293 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
NDHIOOII_00550 2.7e-171 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NDHIOOII_00551 3e-170 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NDHIOOII_00552 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NDHIOOII_00553 1.5e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NDHIOOII_00554 1.5e-256 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NDHIOOII_00555 2.9e-66 yabR J RNA binding
NDHIOOII_00556 2.3e-57 divIC D Septum formation initiator
NDHIOOII_00557 2.4e-38 yabO J S4 domain protein
NDHIOOII_00558 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NDHIOOII_00559 3.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NDHIOOII_00560 3.6e-114 S (CBS) domain
NDHIOOII_00561 4.9e-145 tesE Q hydratase
NDHIOOII_00562 1.8e-178 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
NDHIOOII_00563 4.6e-171 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
NDHIOOII_00564 1.4e-95 S NADPH-dependent FMN reductase
NDHIOOII_00565 1.4e-98 S peptidoglycan catabolic process
NDHIOOII_00568 6.2e-105 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
NDHIOOII_00569 7e-92 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
NDHIOOII_00570 4.5e-55 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NDHIOOII_00571 5.6e-42
NDHIOOII_00572 6e-143 S Domain of unknown function DUF1829
NDHIOOII_00573 4e-22
NDHIOOII_00574 1.7e-207 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
NDHIOOII_00575 0.0 clpL O associated with various cellular activities
NDHIOOII_00576 8e-142 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
NDHIOOII_00577 7e-99 S Pfam:DUF3816
NDHIOOII_00578 0.0 clpE O Belongs to the ClpA ClpB family
NDHIOOII_00579 3.9e-26 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NDHIOOII_00580 1e-24
NDHIOOII_00581 1.2e-19 relB L Addiction module antitoxin, RelB DinJ family
NDHIOOII_00582 1.9e-86 XK27_08850 J Aminoacyl-tRNA editing domain
NDHIOOII_00583 6.5e-64 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NDHIOOII_00584 1.1e-197 V Beta-lactamase
NDHIOOII_00585 7.8e-239 hsdR 3.1.21.3 L Type I restriction enzyme R protein N terminus (HSDR_N)
NDHIOOII_00586 1.7e-44 hsdR 3.1.21.3 L Type I restriction enzyme R protein N terminus (HSDR_N)
NDHIOOII_00587 7e-254 hsdM 2.1.1.72 V type I restriction-modification system
NDHIOOII_00588 5.4e-184 M family 8
NDHIOOII_00589 4.3e-92
NDHIOOII_00590 1.4e-124 pnb C nitroreductase
NDHIOOII_00591 4.8e-84 ogt 2.1.1.63 L Methyltransferase
NDHIOOII_00592 1.8e-154 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
NDHIOOII_00593 1e-67 S Protein of unknown function (DUF3021)
NDHIOOII_00594 3e-75 K LytTr DNA-binding domain
NDHIOOII_00595 2.3e-159 sufD O Uncharacterized protein family (UPF0051)
NDHIOOII_00596 2e-111 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NDHIOOII_00597 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
NDHIOOII_00598 4.1e-195 S Uncharacterised protein family (UPF0236)
NDHIOOII_00599 3.3e-194 lplA 6.3.1.20 H Lipoate-protein ligase
NDHIOOII_00600 7.1e-63
NDHIOOII_00601 1.8e-14
NDHIOOII_00602 3.3e-108
NDHIOOII_00603 2.6e-134 V ABC transporter
NDHIOOII_00604 1.8e-212 EGP Major facilitator Superfamily
NDHIOOII_00605 9.4e-256 G PTS system Galactitol-specific IIC component
NDHIOOII_00606 8.9e-29 1.6.5.5 C Zinc-binding dehydrogenase
NDHIOOII_00607 6.2e-35 1.6.5.5 C Zinc-binding dehydrogenase
NDHIOOII_00608 1.5e-160
NDHIOOII_00609 1e-72 K Transcriptional regulator
NDHIOOII_00610 2e-188 D Alpha beta
NDHIOOII_00611 6.4e-52 ypaA S Protein of unknown function (DUF1304)
NDHIOOII_00612 0.0 yjcE P Sodium proton antiporter
NDHIOOII_00613 1.6e-52 yvlA
NDHIOOII_00614 2.2e-114 P Cobalt transport protein
NDHIOOII_00615 2.4e-251 cbiO1 S ABC transporter, ATP-binding protein
NDHIOOII_00616 2.7e-97 S ABC-type cobalt transport system, permease component
NDHIOOII_00617 5e-24 K Helix-turn-helix domain
NDHIOOII_00618 7.1e-89 ymdB S Macro domain protein
NDHIOOII_00619 2.1e-197 EGP Major facilitator Superfamily
NDHIOOII_00620 4.9e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NDHIOOII_00621 1.7e-210 folP 2.5.1.15 H dihydropteroate synthase
NDHIOOII_00622 1e-43
NDHIOOII_00623 5.6e-40
NDHIOOII_00625 1.1e-167 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NDHIOOII_00626 6.9e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
NDHIOOII_00627 1.5e-267 yjeM E Amino Acid
NDHIOOII_00628 1.4e-278 arlS 2.7.13.3 T Histidine kinase
NDHIOOII_00629 5.6e-121 K response regulator
NDHIOOII_00630 1.3e-16 S Helix-turn-helix domain
NDHIOOII_00632 3.3e-12
NDHIOOII_00634 3.6e-47
NDHIOOII_00635 5.2e-106 S D5 N terminal like
NDHIOOII_00636 3e-207 amtB P ammonium transporter
NDHIOOII_00637 1.8e-248 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
NDHIOOII_00638 1.1e-81 yvbK 3.1.3.25 K GNAT family
NDHIOOII_00639 9.9e-191 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
NDHIOOII_00640 7.2e-89 ygfC K transcriptional regulator (TetR family)
NDHIOOII_00641 1.5e-184 hrtB V ABC transporter permease
NDHIOOII_00642 7.4e-121 devA 3.6.3.25 V ABC transporter, ATP-binding protein
NDHIOOII_00643 2.2e-166 brpA K Cell envelope-like function transcriptional attenuator common domain protein
NDHIOOII_00644 1.6e-141 epsB M biosynthesis protein
NDHIOOII_00645 2.5e-122 ywqD 2.7.10.1 D Capsular exopolysaccharide family
NDHIOOII_00646 1.3e-106 rfbP M Bacterial sugar transferase
NDHIOOII_00647 1.1e-279 cadA P P-type ATPase
NDHIOOII_00648 6.4e-131 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
NDHIOOII_00649 5.6e-124
NDHIOOII_00650 1.9e-50 S Sugar efflux transporter for intercellular exchange
NDHIOOII_00651 8.3e-290 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
NDHIOOII_00652 4.2e-95
NDHIOOII_00653 2.3e-24
NDHIOOII_00654 8.7e-63 asp S Asp23 family, cell envelope-related function
NDHIOOII_00655 5.9e-88 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
NDHIOOII_00657 8.9e-253 oppD EP Psort location Cytoplasmic, score
NDHIOOII_00658 1.1e-92 lytE M LysM domain protein
NDHIOOII_00659 4.2e-149 xth 3.1.11.2 L exodeoxyribonuclease III
NDHIOOII_00660 1.1e-66 L Terminase small subunit
NDHIOOII_00661 5.5e-31 L NUMOD4 motif
NDHIOOII_00662 8.6e-10 S Phage terminase large subunit
NDHIOOII_00663 1.2e-195 S Phage terminase, large subunit
NDHIOOII_00664 1.4e-211 S Phage portal protein, SPP1 Gp6-like
NDHIOOII_00665 7.7e-141 S Phage Mu protein F like protein
NDHIOOII_00667 9.6e-64 S aminoacyl-tRNA ligase activity
NDHIOOII_00668 1.3e-114
NDHIOOII_00669 3e-47 S Phage gp6-like head-tail connector protein
NDHIOOII_00670 1.6e-17
NDHIOOII_00671 9.4e-43 S exonuclease activity
NDHIOOII_00672 2.1e-43
NDHIOOII_00673 1.9e-85 S Phage major tail protein 2
NDHIOOII_00674 1.4e-45 S Pfam:Phage_TAC_12
NDHIOOII_00675 4.6e-20
NDHIOOII_00676 8.8e-132 S peptidoglycan catabolic process
NDHIOOII_00677 4.7e-63 S Phage tail protein
NDHIOOII_00678 0.0 helD 3.6.4.12 L DNA helicase
NDHIOOII_00679 5.3e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
NDHIOOII_00680 5.9e-139 topA2 5.99.1.2 G Topoisomerase IA
NDHIOOII_00681 2.1e-51 L Protein of unknown function (DUF3991)
NDHIOOII_00682 3e-08 nrdH O Glutaredoxin-like protein NrdH
NDHIOOII_00683 8.8e-87 P CorA-like Mg2+ transporter protein
NDHIOOII_00684 1.2e-79
NDHIOOII_00685 9.7e-112 M Lysin motif
NDHIOOII_00686 1.3e-194 EGP Major facilitator Superfamily
NDHIOOII_00687 8.2e-78 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
NDHIOOII_00688 2.7e-101 proW P ABC transporter, permease protein
NDHIOOII_00689 5e-142 proV E ABC transporter, ATP-binding protein
NDHIOOII_00690 9e-108 proWZ P ABC transporter permease
NDHIOOII_00691 5.1e-162 proX M ABC transporter, substrate-binding protein, QAT family
NDHIOOII_00692 0.0 yfiC V ABC transporter
NDHIOOII_00693 1.2e-308 lmrA V ABC transporter, ATP-binding protein
NDHIOOII_00694 1.2e-76 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
NDHIOOII_00695 6.3e-114 recT L RecT family
NDHIOOII_00700 6.9e-115 K BRO family, N-terminal domain
NDHIOOII_00701 1.9e-95 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NDHIOOII_00702 8.3e-125 yhiD S MgtC family
NDHIOOII_00703 7e-118 S GyrI-like small molecule binding domain
NDHIOOII_00704 1.5e-07
NDHIOOII_00705 6.6e-111 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
NDHIOOII_00706 7.9e-42 azlD E Branched-chain amino acid transport
NDHIOOII_00707 4.5e-206 yttB EGP Major facilitator Superfamily
NDHIOOII_00708 8.5e-59
NDHIOOII_00709 1.3e-157 S Polyphosphate nucleotide phosphotransferase, PPK2 family
NDHIOOII_00710 1.1e-95 K DNA-binding helix-turn-helix protein
NDHIOOII_00711 8.2e-16
NDHIOOII_00713 1.2e-10 2.7.1.24 H dephospho-CoA kinase activity
NDHIOOII_00715 0.0 pacL 3.6.3.8 P P-type ATPase
NDHIOOII_00716 2.6e-85 dps P Belongs to the Dps family
NDHIOOII_00719 0.0 GT2,GT4 LM gp58-like protein
NDHIOOII_00720 8.4e-52
NDHIOOII_00721 0.0 M Phage tail tape measure protein TP901
NDHIOOII_00722 4.2e-35
NDHIOOII_00723 9e-58
NDHIOOII_00724 2.9e-71 S Phage tail tube protein, TTP
NDHIOOII_00725 3e-44
NDHIOOII_00726 8.6e-80
NDHIOOII_00727 4.6e-58
NDHIOOII_00728 1.1e-34
NDHIOOII_00729 6.1e-167 S Phage major capsid protein E
NDHIOOII_00730 1.3e-52
NDHIOOII_00731 3.2e-49 S Domain of unknown function (DUF4355)
NDHIOOII_00732 2.4e-150 S Phage Mu protein F like protein
NDHIOOII_00733 1e-220 S Phage portal protein, SPP1 Gp6-like
NDHIOOII_00734 6.4e-219 S Terminase-like family
NDHIOOII_00735 7.3e-118 xtmA L Terminase small subunit
NDHIOOII_00736 1.1e-149 bcgIA 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
NDHIOOII_00737 6.6e-82 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
NDHIOOII_00740 3.3e-10
NDHIOOII_00743 1.7e-37
NDHIOOII_00746 4.1e-61 rusA L Endodeoxyribonuclease RusA
NDHIOOII_00754 1.6e-58 S VRR_NUC
NDHIOOII_00756 2.3e-212 S Virulence-associated protein E
NDHIOOII_00758 7.5e-86 S nucleotide binding
NDHIOOII_00759 4.3e-101
NDHIOOII_00760 5.3e-19 S N-acetylmuramoyl-L-alanine amidase activity
NDHIOOII_00761 4.8e-43
NDHIOOII_00762 1.9e-24
NDHIOOII_00763 8.4e-08
NDHIOOII_00767 3.2e-63 M lysozyme activity
NDHIOOII_00768 7.9e-09
NDHIOOII_00769 6.6e-43 S Phage Connector (GP10)
NDHIOOII_00770 6.8e-127 S viral capsid
NDHIOOII_00779 6.4e-165 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
NDHIOOII_00780 8.3e-221 norA EGP Major facilitator Superfamily
NDHIOOII_00781 3.3e-43 1.3.5.4 S FMN binding
NDHIOOII_00782 8.4e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NDHIOOII_00785 2e-144 clpB O Belongs to the ClpA ClpB family
NDHIOOII_00793 3.9e-75 xerS L Belongs to the 'phage' integrase family
NDHIOOII_00794 6.5e-127 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
NDHIOOII_00795 8.1e-82 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
NDHIOOII_00796 2.6e-52
NDHIOOII_00798 1.4e-144 ytxK 2.1.1.72 L N-6 DNA Methylase
NDHIOOII_00799 2.2e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NDHIOOII_00800 1.6e-271 pipD E Dipeptidase
NDHIOOII_00803 1e-12 S Replication initiator protein A (RepA) N-terminus
NDHIOOII_00804 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
NDHIOOII_00805 2.6e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NDHIOOII_00806 7.6e-29 acyP 3.6.1.7 C Belongs to the acylphosphatase family
NDHIOOII_00807 1e-168 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NDHIOOII_00808 2.7e-70 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
NDHIOOII_00809 2.3e-232 V MatE
NDHIOOII_00810 4.8e-145 carA 6.3.5.5 F Belongs to the CarA family
NDHIOOII_00811 2.3e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
NDHIOOII_00812 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
NDHIOOII_00813 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
NDHIOOII_00814 4.5e-146 potB P ABC transporter permease
NDHIOOII_00815 4.9e-140 potC P ABC transporter permease
NDHIOOII_00816 3.9e-209 potD P ABC transporter
NDHIOOII_00817 2.1e-230
NDHIOOII_00818 5e-235 EGP Sugar (and other) transporter
NDHIOOII_00819 5.4e-256 yfnA E Amino Acid
NDHIOOII_00820 6.9e-74 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
NDHIOOII_00821 2.2e-102 gmk2 2.7.4.8 F Guanylate kinase
NDHIOOII_00822 4.3e-82 zur P Belongs to the Fur family
NDHIOOII_00823 3.1e-17 3.2.1.14 GH18
NDHIOOII_00824 2.2e-151
NDHIOOII_00825 9.8e-39 pspC KT positive regulation of macromolecule biosynthetic process
NDHIOOII_00826 1.8e-50
NDHIOOII_00827 5.1e-137 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NDHIOOII_00828 1.2e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
NDHIOOII_00829 4.7e-117 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
NDHIOOII_00830 6.4e-119 S reductase
NDHIOOII_00831 2.5e-302 S amidohydrolase
NDHIOOII_00833 2.9e-241 E amino acid
NDHIOOII_00834 8e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NDHIOOII_00836 2.8e-93 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NDHIOOII_00837 1.1e-212 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
NDHIOOII_00838 5.5e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NDHIOOII_00839 1.3e-35 ynzC S UPF0291 protein
NDHIOOII_00840 1.9e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
NDHIOOII_00841 2.1e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
NDHIOOII_00842 3e-136 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NDHIOOII_00843 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
NDHIOOII_00844 1.4e-15 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NDHIOOII_00845 2.6e-155 3.6.4.12 S PD-(D/E)XK nuclease family transposase
NDHIOOII_00847 2.1e-23 S Domain of unknown function (DUF4767)
NDHIOOII_00849 2e-41
NDHIOOII_00851 1.1e-70 D CobQ CobB MinD ParA nucleotide binding domain protein
NDHIOOII_00852 9.2e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NDHIOOII_00854 5.8e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
NDHIOOII_00855 1.5e-142 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
NDHIOOII_00856 2.4e-139 ymfM S Helix-turn-helix domain
NDHIOOII_00857 1.1e-247 ymfH S Peptidase M16
NDHIOOII_00858 7.2e-80 arpU S Phage transcriptional regulator, ArpU family
NDHIOOII_00861 4.3e-12
NDHIOOII_00864 2.1e-57 S VRR_NUC
NDHIOOII_00867 1.8e-181 galR K Transcriptional regulator
NDHIOOII_00868 9.3e-283 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
NDHIOOII_00869 1.4e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NDHIOOII_00870 3.7e-179 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
NDHIOOII_00871 5.2e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
NDHIOOII_00872 1.4e-92 yxkA S Phosphatidylethanolamine-binding protein
NDHIOOII_00873 9.1e-36
NDHIOOII_00874 9.1e-53
NDHIOOII_00875 2.8e-202
NDHIOOII_00876 7.5e-83 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NDHIOOII_00877 1.2e-135 pnuC H nicotinamide mononucleotide transporter
NDHIOOII_00878 3.9e-156 ytbE 1.1.1.346 S Aldo keto reductase
NDHIOOII_00879 2.2e-125 K response regulator
NDHIOOII_00880 7.4e-183 T PhoQ Sensor
NDHIOOII_00881 2.6e-135 macB2 V ABC transporter, ATP-binding protein
NDHIOOII_00882 0.0 ysaB V FtsX-like permease family
NDHIOOII_00883 7e-58
NDHIOOII_00885 5e-254 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NDHIOOII_00886 2.2e-263 yfnA E amino acid
NDHIOOII_00887 1.9e-119 ybhL S Belongs to the BI1 family
NDHIOOII_00888 1.2e-252 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
NDHIOOII_00889 2.5e-118 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NDHIOOII_00890 1.6e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
NDHIOOII_00891 1e-229 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
NDHIOOII_00892 9.2e-13 cI K Helix-turn-helix XRE-family like proteins
NDHIOOII_00894 6.5e-59 S ORF6C domain
NDHIOOII_00895 2.9e-34
NDHIOOII_00898 1.9e-214 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
NDHIOOII_00899 5e-259 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
NDHIOOII_00901 1.6e-301 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
NDHIOOII_00902 1.7e-190 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
NDHIOOII_00903 2.3e-181 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
NDHIOOII_00904 6.3e-81 ndk 2.7.4.6 F Belongs to the NDK family
NDHIOOII_00905 4.2e-102 glnP P ABC transporter permease
NDHIOOII_00906 2.1e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NDHIOOII_00907 2.6e-160 aatB ET ABC transporter substrate-binding protein
NDHIOOII_00908 6e-38 S Cytochrome B5
NDHIOOII_00909 2.4e-155 yitU 3.1.3.104 S hydrolase
NDHIOOII_00910 2.6e-263 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
NDHIOOII_00911 3.1e-167 znuA P Belongs to the bacterial solute-binding protein 9 family
NDHIOOII_00912 7.7e-123 fhuC P ABC transporter
NDHIOOII_00913 7.2e-128 znuB U ABC 3 transport family
NDHIOOII_00914 2.6e-149 purR 2.4.2.7 F pur operon repressor
NDHIOOII_00915 2.9e-241 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NDHIOOII_00916 1.1e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NDHIOOII_00917 8.9e-48
NDHIOOII_00918 1.9e-147 yxeH S hydrolase
NDHIOOII_00919 3.8e-270 ywfO S HD domain protein
NDHIOOII_00920 5.7e-152 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
NDHIOOII_00921 1.2e-60 L PFAM transposase IS200-family protein
NDHIOOII_00922 7.4e-230 L transposase, IS605 OrfB family
NDHIOOII_00923 1.3e-66 ywiB S Domain of unknown function (DUF1934)
NDHIOOII_00924 8.7e-51 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
NDHIOOII_00933 5.4e-19 E Pfam:DUF955
NDHIOOII_00934 5.9e-15 3.4.21.88 K Helix-turn-helix
NDHIOOII_00935 8.8e-08 cro K Helix-turn-helix XRE-family like proteins
NDHIOOII_00936 3.4e-39
NDHIOOII_00939 1.1e-25
NDHIOOII_00940 2e-271 xylA 5.3.1.5 G Belongs to the xylose isomerase family
NDHIOOII_00941 2.7e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NDHIOOII_00942 1e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
NDHIOOII_00943 3.7e-249 fucP G Major Facilitator Superfamily
NDHIOOII_00944 4.9e-305 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NDHIOOII_00945 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NDHIOOII_00946 2.2e-47 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
NDHIOOII_00947 2.4e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
NDHIOOII_00948 5.9e-132 yebC K Transcriptional regulatory protein
NDHIOOII_00949 2.7e-133
NDHIOOII_00950 2.4e-181 ccpA K catabolite control protein A
NDHIOOII_00951 1.6e-228 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NDHIOOII_00952 3.7e-79 K AsnC family
NDHIOOII_00953 6.5e-85 S Short repeat of unknown function (DUF308)
NDHIOOII_00954 3.4e-79 S Psort location Cytoplasmic, score
NDHIOOII_00955 3.9e-284 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
NDHIOOII_00956 3.2e-236 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
NDHIOOII_00957 1.7e-265 argH 4.3.2.1 E argininosuccinate lyase
NDHIOOII_00958 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
NDHIOOII_00959 5.9e-40 yheA S Belongs to the UPF0342 family
NDHIOOII_00960 1.2e-219 yhaO L Ser Thr phosphatase family protein
NDHIOOII_00961 0.0 L AAA domain
NDHIOOII_00962 3.4e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
NDHIOOII_00964 4.1e-77 hit FG histidine triad
NDHIOOII_00965 2.1e-134 ecsA V ABC transporter, ATP-binding protein
NDHIOOII_00966 8.7e-218 ecsB U ABC transporter
NDHIOOII_00967 1.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NDHIOOII_00968 6.4e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NDHIOOII_00969 8.4e-183 S Phosphotransferase system, EIIC
NDHIOOII_00970 2.1e-12 UW LPXTG-motif cell wall anchor domain protein
NDHIOOII_00971 3.5e-233 preA 1.3.1.1 C 4Fe-4S dicluster domain
NDHIOOII_00972 4e-234 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NDHIOOII_00973 0.0 yhcA V ABC transporter, ATP-binding protein
NDHIOOII_00974 7.3e-36
NDHIOOII_00975 1.6e-31 S Calcineurin-like phosphoesterase
NDHIOOII_00976 1.7e-93 yutD S Protein of unknown function (DUF1027)
NDHIOOII_00977 1.9e-133 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
NDHIOOII_00978 1.9e-102 S Protein of unknown function (DUF1461)
NDHIOOII_00979 4.2e-71 dedA S SNARE-like domain protein
NDHIOOII_00980 5.1e-265 yclK 2.7.13.3 T Histidine kinase
NDHIOOII_00981 4.8e-154 glcU U sugar transport
NDHIOOII_00983 2.7e-46 S calcium ion binding
NDHIOOII_00985 1.3e-25
NDHIOOII_00986 2.7e-14
NDHIOOII_00987 0.0 trxB2 1.8.1.9 C Thioredoxin domain
NDHIOOII_00988 1.2e-105 ahpC 1.11.1.15 O Peroxiredoxin
NDHIOOII_00989 2.4e-189 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NDHIOOII_00990 1.2e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
NDHIOOII_00991 2.6e-107
NDHIOOII_00992 1.4e-181 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NDHIOOII_00993 5.1e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
NDHIOOII_00994 2.9e-27
NDHIOOII_00995 2.7e-39 ptsH G phosphocarrier protein HPR
NDHIOOII_00996 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NDHIOOII_00997 1.4e-116
NDHIOOII_00998 6.1e-157 V ABC transporter, ATP-binding protein
NDHIOOII_00999 9.3e-65 gntR1 K Transcriptional regulator, GntR family
NDHIOOII_01000 0.0 bamA GM domain, Protein
NDHIOOII_01001 0.0 S Peptidase, M23
NDHIOOII_01002 0.0 M NlpC/P60 family
NDHIOOII_01003 8.2e-309 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NDHIOOII_01004 0.0 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NDHIOOII_01005 3.7e-104 K Transcriptional regulator
NDHIOOII_01006 2.1e-157 akr5f 1.1.1.346 S reductase
NDHIOOII_01007 8.4e-96 K Transcriptional regulator C-terminal region
NDHIOOII_01008 6.1e-208 G Transporter, major facilitator family protein
NDHIOOII_01009 2.4e-109 yvrI K RNA polymerase sigma factor, sigma-70 family
NDHIOOII_01010 8.9e-164 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NDHIOOII_01011 4.2e-109 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
NDHIOOII_01012 3.8e-137 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
NDHIOOII_01014 3.7e-154 1.6.5.2 GM NAD(P)H-binding
NDHIOOII_01015 4.5e-74 K Transcriptional regulator
NDHIOOII_01016 2.7e-154 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NDHIOOII_01017 5.2e-116 yjbM 2.7.6.5 S RelA SpoT domain protein
NDHIOOII_01018 5.7e-66 K Transcriptional regulator
NDHIOOII_01019 1e-53 lacA S transferase hexapeptide repeat
NDHIOOII_01021 4.3e-142 S Alpha beta hydrolase
NDHIOOII_01022 3.3e-160 xth 3.1.11.2 L exodeoxyribonuclease III
NDHIOOII_01023 1.1e-50 S Mazg nucleotide pyrophosphohydrolase
NDHIOOII_01024 5e-34
NDHIOOII_01025 2.2e-14 K Cro/C1-type HTH DNA-binding domain
NDHIOOII_01027 9.1e-18
NDHIOOII_01028 4e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NDHIOOII_01029 9.1e-228 mtnE 2.6.1.83 E Aminotransferase
NDHIOOII_01030 1.6e-143 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
NDHIOOII_01031 1.3e-137 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NDHIOOII_01032 9e-226 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NDHIOOII_01033 3e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NDHIOOII_01034 9.5e-197 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NDHIOOII_01035 7.3e-103 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
NDHIOOII_01036 1.9e-127 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
NDHIOOII_01037 2.7e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NDHIOOII_01038 3.4e-172 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
NDHIOOII_01039 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NDHIOOII_01040 6.4e-232 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
NDHIOOII_01041 6e-97 2.3.1.128 K Acetyltransferase (GNAT) domain
NDHIOOII_01042 6.5e-143 lmrB EGP Major facilitator Superfamily
NDHIOOII_01043 1.5e-81 lmrB EGP Major facilitator Superfamily
NDHIOOII_01044 8.2e-63 yneR
NDHIOOII_01045 2.5e-110 GM NAD(P)H-binding
NDHIOOII_01046 1.1e-185 S membrane
NDHIOOII_01047 5.1e-55 L Psort location Cytoplasmic, score
NDHIOOII_01048 3.7e-42 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
NDHIOOII_01049 1.2e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
NDHIOOII_01050 6.6e-70 yqeY S YqeY-like protein
NDHIOOII_01051 1.4e-186 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NDHIOOII_01052 1.2e-140 L AAA domain
NDHIOOII_01053 1.7e-210 res L Helicase C-terminal domain protein
NDHIOOII_01054 1.3e-84 perR P Belongs to the Fur family
NDHIOOII_01055 4.2e-259 EGP Major facilitator Superfamily
NDHIOOII_01056 4.4e-172
NDHIOOII_01057 4e-72
NDHIOOII_01058 1.5e-77 S SEC-C Motif Domain Protein
NDHIOOII_01059 6.5e-38 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
NDHIOOII_01060 4.1e-27
NDHIOOII_01061 2.7e-210 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
NDHIOOII_01062 2.3e-21
NDHIOOII_01063 5.6e-33 S Phage tail assembly chaperone protein, TAC
NDHIOOII_01064 1.2e-82 S Phage tail tube protein
NDHIOOII_01065 6.5e-28 S Protein of unknown function (DUF3168)
NDHIOOII_01066 1.7e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NDHIOOII_01067 5.5e-214 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NDHIOOII_01068 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
NDHIOOII_01069 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NDHIOOII_01070 1.2e-202 camS S sex pheromone
NDHIOOII_01071 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NDHIOOII_01072 4.1e-278 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NDHIOOII_01073 2.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NDHIOOII_01074 6.7e-187 yegS 2.7.1.107 G Lipid kinase
NDHIOOII_01075 8.9e-259 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NDHIOOII_01076 1.7e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NDHIOOII_01077 1e-23
NDHIOOII_01078 4.4e-103 V VanZ like family
NDHIOOII_01079 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
NDHIOOII_01080 4.2e-221 cycA E Amino acid permease
NDHIOOII_01081 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NDHIOOII_01082 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NDHIOOII_01083 2.6e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NDHIOOII_01084 5.2e-156 metQ_4 P Belongs to the nlpA lipoprotein family
NDHIOOII_01086 3.1e-206 araR K Transcriptional regulator
NDHIOOII_01087 6.6e-156 ytbE 1.1.1.346 S Aldo keto reductase
NDHIOOII_01088 2.7e-174 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NDHIOOII_01089 2.9e-75 mraZ K Belongs to the MraZ family
NDHIOOII_01090 1.4e-164 xylT EGP Major facilitator Superfamily
NDHIOOII_01092 1.1e-118 xylR GK ROK family
NDHIOOII_01093 2.2e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NDHIOOII_01094 2.2e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NDHIOOII_01095 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
NDHIOOII_01096 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
NDHIOOII_01097 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NDHIOOII_01098 6.1e-132 jag S R3H domain protein
NDHIOOII_01099 7.3e-253 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NDHIOOII_01100 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
NDHIOOII_01101 0.0 asnB 6.3.5.4 E Asparagine synthase
NDHIOOII_01102 2.3e-295 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NDHIOOII_01103 6.4e-248 yxbA 6.3.1.12 S ATP-grasp enzyme
NDHIOOII_01104 1.7e-35 S Protein of unknown function (DUF4065)
NDHIOOII_01106 4.7e-79 xerH L Belongs to the 'phage' integrase family
NDHIOOII_01109 1.9e-56 cadX K Bacterial regulatory protein, arsR family
NDHIOOII_01110 1.4e-71 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NDHIOOII_01111 1.5e-181 arsB 1.20.4.1 P Sodium Bile acid symporter family
NDHIOOII_01112 8.9e-178 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NDHIOOII_01113 5.6e-172 arcC 2.7.2.2 E Belongs to the carbamate kinase family
NDHIOOII_01114 5.3e-158 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
NDHIOOII_01115 9.1e-167 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
NDHIOOII_01116 3e-75
NDHIOOII_01117 2.5e-220 dacA 3.4.16.4 M Belongs to the peptidase S11 family
NDHIOOII_01118 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NDHIOOII_01120 2.1e-255 yifK E Amino acid permease
NDHIOOII_01121 5.3e-145 endA V DNA/RNA non-specific endonuclease
NDHIOOII_01122 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NDHIOOII_01123 5e-41 ybaN S Protein of unknown function (DUF454)
NDHIOOII_01124 1.2e-71 S Protein of unknown function (DUF3290)
NDHIOOII_01125 6.2e-114 yviA S Protein of unknown function (DUF421)
NDHIOOII_01126 1.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
NDHIOOII_01127 2e-18
NDHIOOII_01128 2.1e-90 ntd 2.4.2.6 F Nucleoside
NDHIOOII_01129 4.8e-151 3.1.3.102, 3.1.3.104 S hydrolase
NDHIOOII_01130 4.4e-48 yrvD S Pfam:DUF1049
NDHIOOII_01132 1.8e-42 L Belongs to the 'phage' integrase family
NDHIOOII_01133 5.1e-63 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NDHIOOII_01134 6.8e-262 yfnA E amino acid
NDHIOOII_01135 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
NDHIOOII_01136 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NDHIOOII_01137 4.1e-40 ylqC S Belongs to the UPF0109 family
NDHIOOII_01138 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
NDHIOOII_01139 7.9e-250 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NDHIOOII_01140 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
NDHIOOII_01141 6.7e-183 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NDHIOOII_01142 0.0 smc D Required for chromosome condensation and partitioning
NDHIOOII_01143 4.2e-132 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NDHIOOII_01144 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
NDHIOOII_01145 1.4e-187 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
NDHIOOII_01146 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NDHIOOII_01147 0.0 yloV S DAK2 domain fusion protein YloV
NDHIOOII_01148 3e-57 asp S Asp23 family, cell envelope-related function
NDHIOOII_01149 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
NDHIOOII_01150 7e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
NDHIOOII_01151 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
NDHIOOII_01152 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
NDHIOOII_01153 0.0 KLT serine threonine protein kinase
NDHIOOII_01154 5.9e-132 stp 3.1.3.16 T phosphatase
NDHIOOII_01155 6.3e-249 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NDHIOOII_01156 1.5e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NDHIOOII_01157 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NDHIOOII_01158 4.7e-146 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NDHIOOII_01159 5e-31 lytE M LysM domain protein
NDHIOOII_01160 3.1e-57 tdk 2.7.1.21 F Thymidine kinase
NDHIOOII_01162 1.5e-33 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
NDHIOOII_01165 6e-07
NDHIOOII_01170 7.8e-100 2.1.1.37 L C-5 cytosine-specific DNA methylase
NDHIOOII_01173 2.5e-30 S Protein of unknown function (DUF1064)
NDHIOOII_01174 8.7e-65 S DNA ligase (ATP) activity
NDHIOOII_01176 2.2e-234 dnaE_2 2.7.7.7 L DNA polymerase
NDHIOOII_01179 2e-118 yrkL S Flavodoxin-like fold
NDHIOOII_01180 4e-53
NDHIOOII_01181 1.3e-17 S Domain of unknown function (DUF4767)
NDHIOOII_01182 5.1e-136 3.6.4.12 S PD-(D/E)XK nuclease family transposase
NDHIOOII_01183 6.3e-50
NDHIOOII_01184 1.5e-205 nrnB S DHHA1 domain
NDHIOOII_01185 2e-230 S Uncharacterized protein conserved in bacteria (DUF2325)
NDHIOOII_01186 5.4e-248 brnQ U Component of the transport system for branched-chain amino acids
NDHIOOII_01187 5.8e-106 NU mannosyl-glycoprotein
NDHIOOII_01188 4.9e-145 S Putative ABC-transporter type IV
NDHIOOII_01189 5.4e-273 S ABC transporter, ATP-binding protein
NDHIOOII_01190 7e-08
NDHIOOII_01191 8e-160 mleR K LysR family
NDHIOOII_01192 8e-252 yjjP S Putative threonine/serine exporter
NDHIOOII_01193 3.8e-119 ung2 3.2.2.27 L Uracil-DNA glycosylase
NDHIOOII_01194 2.6e-275 emrY EGP Major facilitator Superfamily
NDHIOOII_01195 2.4e-93 I Alpha beta
NDHIOOII_01196 6.2e-84 I Alpha beta
NDHIOOII_01197 5.8e-103 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
NDHIOOII_01198 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NDHIOOII_01200 1.1e-164 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
NDHIOOII_01201 4.3e-119 S Domain of unknown function (DUF4811)
NDHIOOII_01202 4.7e-269 lmrB EGP Major facilitator Superfamily
NDHIOOII_01203 4.8e-84 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NDHIOOII_01204 8.6e-173 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NDHIOOII_01205 6e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
NDHIOOII_01206 5.1e-116 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NDHIOOII_01207 1e-116 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
NDHIOOII_01208 1e-95 ribA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NDHIOOII_01209 1.4e-228 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
NDHIOOII_01210 6.4e-177 K AI-2E family transporter
NDHIOOII_01211 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
NDHIOOII_01212 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
NDHIOOII_01213 2.3e-125 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
NDHIOOII_01214 1.6e-188 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
NDHIOOII_01215 8e-174 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NDHIOOII_01216 7.5e-58
NDHIOOII_01217 7.5e-180 prmA J Ribosomal protein L11 methyltransferase
NDHIOOII_01218 1.2e-129 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NDHIOOII_01219 1.2e-52
NDHIOOII_01220 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NDHIOOII_01221 8.4e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NDHIOOII_01222 4e-169 yniA G Phosphotransferase enzyme family
NDHIOOII_01223 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
NDHIOOII_01224 7.5e-112 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NDHIOOII_01225 5e-151 mreC M Involved in formation and maintenance of cell shape
NDHIOOII_01226 1.7e-179 mreB D cell shape determining protein MreB
NDHIOOII_01227 4.7e-122 radC L DNA repair protein
NDHIOOII_01228 6.5e-243 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
NDHIOOII_01229 1.8e-231 ndh 1.6.99.3 C NADH dehydrogenase
NDHIOOII_01230 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NDHIOOII_01231 6.7e-309 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
NDHIOOII_01232 8.2e-185 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
NDHIOOII_01233 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
NDHIOOII_01234 1.7e-101 dnaQ 2.7.7.7 L DNA polymerase III
NDHIOOII_01235 1.3e-75 S PAS domain
NDHIOOII_01236 6.1e-88 K Acetyltransferase (GNAT) domain
NDHIOOII_01237 5.9e-82 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
NDHIOOII_01238 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
NDHIOOII_01239 6.2e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NDHIOOII_01240 1.8e-104 yxjI
NDHIOOII_01241 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NDHIOOII_01242 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
NDHIOOII_01243 6.8e-147 est 3.1.1.1 S Serine aminopeptidase, S33
NDHIOOII_01244 1.8e-34 secG U Preprotein translocase
NDHIOOII_01245 8.1e-293 clcA P chloride
NDHIOOII_01246 7.7e-239 yifK E Amino acid permease
NDHIOOII_01249 2.2e-62
NDHIOOII_01251 4.3e-50
NDHIOOII_01252 3.7e-35
NDHIOOII_01253 6.2e-138 gp17a S Terminase-like family
NDHIOOII_01254 2.1e-22 1.1.98.6, 3.6.3.14, 3.6.3.15, 4.1.1.35 L Participates in initiation and elongation during chromosome replication
NDHIOOII_01255 3.3e-22 gp17a S Terminase-like family
NDHIOOII_01256 8.6e-17
NDHIOOII_01259 1.7e-34 yaaA S S4 domain protein YaaA
NDHIOOII_01260 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NDHIOOII_01261 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NDHIOOII_01262 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NDHIOOII_01263 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
NDHIOOII_01264 3.1e-77 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NDHIOOII_01265 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NDHIOOII_01266 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
NDHIOOII_01267 7.6e-74 rplI J Binds to the 23S rRNA
NDHIOOII_01268 5.3e-235 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
NDHIOOII_01269 2.5e-88
NDHIOOII_01270 9.2e-92 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NDHIOOII_01271 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
NDHIOOII_01272 6.5e-156 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
NDHIOOII_01273 1.7e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
NDHIOOII_01274 2.3e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NDHIOOII_01275 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NDHIOOII_01276 7.6e-09
NDHIOOII_01277 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
NDHIOOII_01278 3.6e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
NDHIOOII_01279 1.8e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NDHIOOII_01280 1.8e-217 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
NDHIOOII_01281 1.4e-47 gcvH E glycine cleavage
NDHIOOII_01282 1.1e-220 rodA D Belongs to the SEDS family
NDHIOOII_01283 1e-31 S Protein of unknown function (DUF2969)
NDHIOOII_01284 1.9e-178 mbl D Cell shape determining protein MreB Mrl
NDHIOOII_01285 1e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NDHIOOII_01286 1.3e-33 ywzB S Protein of unknown function (DUF1146)
NDHIOOII_01287 1e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
NDHIOOII_01288 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NDHIOOII_01289 1.9e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NDHIOOII_01290 1.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NDHIOOII_01291 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NDHIOOII_01292 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NDHIOOII_01293 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NDHIOOII_01294 7.6e-121 atpB C it plays a direct role in the translocation of protons across the membrane
NDHIOOII_01295 5.9e-233 pyrP F Permease
NDHIOOII_01296 2e-130 yibF S overlaps another CDS with the same product name
NDHIOOII_01297 9.9e-192 yibE S overlaps another CDS with the same product name
NDHIOOII_01298 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NDHIOOII_01299 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NDHIOOII_01300 1.8e-231 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NDHIOOII_01301 1.2e-196 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
NDHIOOII_01302 7.3e-166 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NDHIOOII_01303 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NDHIOOII_01304 6e-108 tdk 2.7.1.21 F thymidine kinase
NDHIOOII_01305 2e-219 S cog cog1373
NDHIOOII_01306 3.7e-176 coaA 2.7.1.33 F Pantothenic acid kinase
NDHIOOII_01307 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NDHIOOII_01308 1e-159 EG EamA-like transporter family
NDHIOOII_01309 1.2e-252 nox C NADH oxidase
NDHIOOII_01310 5.3e-240 nox C NADH oxidase
NDHIOOII_01311 0.0 helD 3.6.4.12 L DNA helicase
NDHIOOII_01312 1.2e-134 K response regulator
NDHIOOII_01314 1.8e-78 lytE M Lysin motif
NDHIOOII_01315 1.1e-147 XK27_02985 S Cof-like hydrolase
NDHIOOII_01316 1.8e-78 K Transcriptional regulator
NDHIOOII_01317 0.0 oatA I Acyltransferase
NDHIOOII_01318 5.6e-52
NDHIOOII_01319 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NDHIOOII_01320 1.2e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NDHIOOII_01321 2.2e-125 ybbR S YbbR-like protein
NDHIOOII_01322 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NDHIOOII_01325 9e-28
NDHIOOII_01326 3.2e-33 GT2,GT4 O gp58-like protein
NDHIOOII_01327 3.5e-17
NDHIOOII_01329 1.3e-07
NDHIOOII_01331 9e-170 whiA K May be required for sporulation
NDHIOOII_01332 6.5e-187 ybhK S Required for morphogenesis under gluconeogenic growth conditions
NDHIOOII_01333 9.2e-161 rapZ S Displays ATPase and GTPase activities
NDHIOOII_01334 2.4e-245 steT E amino acid
NDHIOOII_01335 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NDHIOOII_01336 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NDHIOOII_01337 6.9e-14
NDHIOOII_01338 7.3e-115 yfbR S HD containing hydrolase-like enzyme
NDHIOOII_01341 6.4e-43
NDHIOOII_01342 1.8e-85 dck 2.7.1.74 F Deoxynucleoside kinase
NDHIOOII_01357 1.6e-71 2.7.1.74, 2.7.1.76 F Nucleoside
NDHIOOII_01358 1.1e-56
NDHIOOII_01359 1.7e-207 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NDHIOOII_01361 6.7e-232 yfmL L DEAD DEAH box helicase
NDHIOOII_01362 1.3e-190 mocA S Oxidoreductase
NDHIOOII_01363 4.5e-61 S Domain of unknown function (DUF4828)
NDHIOOII_01364 8.6e-107 yvdD 3.2.2.10 S Belongs to the LOG family
NDHIOOII_01365 3.5e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
NDHIOOII_01366 3e-292 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
NDHIOOII_01367 6.7e-195 S Protein of unknown function (DUF3114)
NDHIOOII_01368 3.2e-80 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
NDHIOOII_01369 1.3e-120 ybhL S Belongs to the BI1 family
NDHIOOII_01370 6.2e-79 uspA T universal stress protein
NDHIOOII_01371 7.1e-286 lacS G Transporter
NDHIOOII_01372 1.4e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NDHIOOII_01373 2.9e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NDHIOOII_01374 1.7e-191 yeaN P Transporter, major facilitator family protein
NDHIOOII_01375 1.2e-73 S 3-demethylubiquinone-9 3-methyltransferase
NDHIOOII_01376 1.3e-84 nrdI F Belongs to the NrdI family
NDHIOOII_01377 2.3e-240 yhdP S Transporter associated domain
NDHIOOII_01378 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
NDHIOOII_01379 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
NDHIOOII_01380 8.9e-101 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NDHIOOII_01381 1.1e-108 gluP 3.4.21.105 S Peptidase, S54 family
NDHIOOII_01382 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
NDHIOOII_01383 5.6e-183 glk 2.7.1.2 G Glucokinase
NDHIOOII_01384 3.4e-67 yqhL P Rhodanese-like protein
NDHIOOII_01385 5.9e-22 S Protein of unknown function (DUF3042)
NDHIOOII_01386 1.7e-176 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NDHIOOII_01387 5.2e-264 glnA 6.3.1.2 E glutamine synthetase
NDHIOOII_01388 2e-296 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NDHIOOII_01389 3.3e-113 J 2'-5' RNA ligase superfamily
NDHIOOII_01390 2.2e-70 yqhY S Asp23 family, cell envelope-related function
NDHIOOII_01391 6.1e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NDHIOOII_01392 2.7e-149 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NDHIOOII_01393 2.6e-215 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NDHIOOII_01394 1.6e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NDHIOOII_01395 3.4e-155 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
NDHIOOII_01396 4.1e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
NDHIOOII_01397 9.6e-77 argR K Regulates arginine biosynthesis genes
NDHIOOII_01398 1.1e-180 recN L May be involved in recombinational repair of damaged DNA
NDHIOOII_01399 4.8e-64 recN L May be involved in recombinational repair of damaged DNA
NDHIOOII_01400 4.2e-53
NDHIOOII_01401 4.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
NDHIOOII_01402 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NDHIOOII_01403 6.9e-223 P ammonium transporter
NDHIOOII_01404 5.6e-97 ureI S AmiS/UreI family transporter
NDHIOOII_01405 3.7e-48 ureA 3.5.1.5 E Urease, gamma subunit
NDHIOOII_01406 2.1e-69 ureB 3.5.1.5 E Urease beta subunit
NDHIOOII_01407 0.0 ureC 3.5.1.5 E Amidohydrolase family
NDHIOOII_01408 8.6e-78 ureE O Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
NDHIOOII_01409 1.9e-132 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NDHIOOII_01410 3.6e-114 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
NDHIOOII_01411 3.2e-166 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NDHIOOII_01412 8.2e-185 nikMN P PDGLE domain
NDHIOOII_01413 2e-128 P Cobalt transport protein
NDHIOOII_01414 4.4e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NDHIOOII_01415 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NDHIOOII_01416 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NDHIOOII_01417 2.2e-48 ylxQ J ribosomal protein
NDHIOOII_01418 1e-44 ylxR K Protein of unknown function (DUF448)
NDHIOOII_01419 2.8e-216 nusA K Participates in both transcription termination and antitermination
NDHIOOII_01420 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
NDHIOOII_01421 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NDHIOOII_01422 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NDHIOOII_01423 3.7e-235 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
NDHIOOII_01424 7.6e-138 cdsA 2.7.7.41 I Belongs to the CDS family
NDHIOOII_01425 2.1e-140 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NDHIOOII_01426 3.1e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NDHIOOII_01427 1.7e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
NDHIOOII_01428 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NDHIOOII_01429 3.5e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
NDHIOOII_01430 9.8e-183 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NDHIOOII_01431 5.4e-49 yazA L GIY-YIG catalytic domain protein
NDHIOOII_01432 3.2e-141 yabB 2.1.1.223 L Methyltransferase small domain
NDHIOOII_01433 1.6e-117 plsC 2.3.1.51 I Acyltransferase
NDHIOOII_01434 1.5e-51 D Phage-related minor tail protein
NDHIOOII_01436 1.9e-66 lrgA S LrgA family
NDHIOOII_01437 4.5e-124 lrgB M LrgB-like family
NDHIOOII_01438 6.4e-179 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NDHIOOII_01439 2.4e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
NDHIOOII_01440 2.3e-187 galR K Periplasmic binding protein-like domain
NDHIOOII_01441 0.0 rafA 3.2.1.22 G alpha-galactosidase
NDHIOOII_01442 1.4e-86 S Protein of unknown function (DUF1440)
NDHIOOII_01443 3.4e-194 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
NDHIOOII_01444 4.2e-214 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
NDHIOOII_01445 7.7e-58
NDHIOOII_01446 2.8e-205 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
NDHIOOII_01447 8.8e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NDHIOOII_01448 5e-218 patA 2.6.1.1 E Aminotransferase
NDHIOOII_01449 4.7e-140 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NDHIOOII_01450 1.2e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NDHIOOII_01451 6.5e-223 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
NDHIOOII_01452 3.3e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
NDHIOOII_01453 2.5e-250 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NDHIOOII_01455 9.4e-97 3.6.4.12 L DnaB-like helicase C terminal domain
NDHIOOII_01458 2e-122 recD 3.1.11.5 L Helix-hairpin-helix containing domain
NDHIOOII_01461 3.1e-78 O COG0330 Membrane protease subunits, stomatin prohibitin homologs
NDHIOOII_01463 9.4e-53 pnuC H Nicotinamide mononucleotide transporter
NDHIOOII_01468 1.8e-19
NDHIOOII_01469 6.1e-174 ampC V Beta-lactamase
NDHIOOII_01470 3.5e-238 arcA 3.5.3.6 E Arginine
NDHIOOII_01471 2.7e-79 argR K Regulates arginine biosynthesis genes
NDHIOOII_01472 7.5e-261 E Arginine ornithine antiporter
NDHIOOII_01473 5e-225 arcD U Amino acid permease
NDHIOOII_01474 1.1e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
NDHIOOII_01475 2e-263 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
NDHIOOII_01477 1.4e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NDHIOOII_01478 1e-81
NDHIOOII_01479 1.8e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NDHIOOII_01480 1.7e-187 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NDHIOOII_01481 1.6e-260 nox C NADH oxidase
NDHIOOII_01482 1.6e-85 hmpT S ECF-type riboflavin transporter, S component
NDHIOOII_01483 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
NDHIOOII_01484 2e-138 accA 2.1.3.15, 6.4.1.2 I alpha subunit
NDHIOOII_01485 9.3e-142 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NDHIOOII_01486 1.8e-259 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
NDHIOOII_01487 3.9e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
NDHIOOII_01488 1.2e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
NDHIOOII_01489 1.5e-225 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
NDHIOOII_01490 1.7e-128 IQ reductase
NDHIOOII_01491 9.7e-156 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
NDHIOOII_01492 6.5e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
NDHIOOII_01493 7.9e-177 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NDHIOOII_01494 4.2e-77 marR K Transcriptional regulator, MarR family
NDHIOOII_01495 1.9e-84 ykuT M mechanosensitive ion channel
NDHIOOII_01496 1.5e-152 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
NDHIOOII_01497 2.2e-73 ykuL S (CBS) domain
NDHIOOII_01498 2.9e-93 S Phosphoesterase
NDHIOOII_01499 1.8e-104 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NDHIOOII_01500 6.1e-143 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
NDHIOOII_01501 1.6e-97 yslB S Protein of unknown function (DUF2507)
NDHIOOII_01502 5.1e-53 trxA O Belongs to the thioredoxin family
NDHIOOII_01503 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
NDHIOOII_01504 1.3e-85 cvpA S Colicin V production protein
NDHIOOII_01505 6.1e-48 yrzB S Belongs to the UPF0473 family
NDHIOOII_01506 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NDHIOOII_01507 4.1e-43 yrzL S Belongs to the UPF0297 family
NDHIOOII_01508 1.2e-274 pepV 3.5.1.18 E dipeptidase PepV
NDHIOOII_01509 1.2e-85 uspA T Belongs to the universal stress protein A family
NDHIOOII_01510 3.4e-178 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NDHIOOII_01511 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
NDHIOOII_01512 2.2e-113
NDHIOOII_01513 2.8e-185 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
NDHIOOII_01514 2e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NDHIOOII_01515 1.8e-31
NDHIOOII_01516 1.3e-114 S CAAX protease self-immunity
NDHIOOII_01517 1.9e-43
NDHIOOII_01519 2.4e-223 mdtG EGP Major facilitator Superfamily
NDHIOOII_01520 4.4e-129 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
NDHIOOII_01521 2.6e-158 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
NDHIOOII_01522 3.2e-178 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
NDHIOOII_01523 5.2e-234 lacZ 3.2.1.23 G -beta-galactosidase
NDHIOOII_01524 0.0 lacS G Transporter
NDHIOOII_01525 2.5e-189 lacR K Transcriptional regulator
NDHIOOII_01526 1.3e-263 dtpT U amino acid peptide transporter
NDHIOOII_01527 7e-150 yjjH S Calcineurin-like phosphoesterase
NDHIOOII_01530 4.6e-109
NDHIOOII_01531 1.2e-250 EGP Major facilitator Superfamily
NDHIOOII_01532 1.3e-301 aspT P Predicted Permease Membrane Region
NDHIOOII_01533 6.3e-131 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
NDHIOOII_01534 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
NDHIOOII_01535 3.1e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NDHIOOII_01536 1.5e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
NDHIOOII_01537 0.0 yhgF K Tex-like protein N-terminal domain protein
NDHIOOII_01538 1.1e-83 ydcK S Belongs to the SprT family
NDHIOOII_01540 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
NDHIOOII_01541 6.5e-184 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
NDHIOOII_01542 0.0 S Bacterial membrane protein, YfhO
NDHIOOII_01543 2.1e-134 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NDHIOOII_01544 5.9e-168 I alpha/beta hydrolase fold
NDHIOOII_01545 3e-212 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
NDHIOOII_01546 0.0 typA T GTP-binding protein TypA
NDHIOOII_01547 1.4e-136 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
NDHIOOII_01548 2.5e-46 yktA S Belongs to the UPF0223 family
NDHIOOII_01549 1.8e-275 lpdA 1.8.1.4 C Dehydrogenase
NDHIOOII_01550 4.2e-229 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
NDHIOOII_01551 1.5e-180 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
NDHIOOII_01552 8.8e-209 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
NDHIOOII_01553 2.7e-82 usp1 T Belongs to the universal stress protein A family
NDHIOOII_01554 2.2e-109 S VIT family
NDHIOOII_01555 1.2e-115 S membrane
NDHIOOII_01556 3.5e-166 czcD P cation diffusion facilitator family transporter
NDHIOOII_01557 9.1e-124 sirR K iron dependent repressor
NDHIOOII_01558 1e-30 cspC K Cold shock protein
NDHIOOII_01559 2.1e-129 thrE S Putative threonine/serine exporter
NDHIOOII_01560 2.1e-82 S Threonine/Serine exporter, ThrE
NDHIOOII_01561 8.8e-119 lssY 3.6.1.27 I phosphatase
NDHIOOII_01562 1.3e-09 2.3.1.128 J Acetyltransferase (GNAT) domain
NDHIOOII_01563 1.3e-276 lysP E amino acid
NDHIOOII_01564 2e-64
NDHIOOII_01565 1.2e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NDHIOOII_01566 8.1e-73 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NDHIOOII_01567 0.0 dnaK O Heat shock 70 kDa protein
NDHIOOII_01568 2.5e-198 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NDHIOOII_01569 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NDHIOOII_01570 5e-273 pipD E Dipeptidase
NDHIOOII_01571 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NDHIOOII_01572 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NDHIOOII_01573 1e-110 K Bacterial regulatory proteins, tetR family
NDHIOOII_01574 7e-192 ypbB 5.1.3.1 S Helix-turn-helix domain
NDHIOOII_01575 1.8e-270 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
NDHIOOII_01576 2.5e-13 M Lysin motif
NDHIOOII_01577 2.2e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
NDHIOOII_01578 1.4e-205 rpsA 1.17.7.4 J Ribosomal protein S1
NDHIOOII_01579 7.2e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
NDHIOOII_01580 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
NDHIOOII_01581 5.6e-77 dnaI L Primosomal protein DnaI
NDHIOOII_01582 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NDHIOOII_01583 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
NDHIOOII_01584 3.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NDHIOOII_01585 1.4e-95 yqeG S HAD phosphatase, family IIIA
NDHIOOII_01586 1.1e-217 yqeH S Ribosome biogenesis GTPase YqeH
NDHIOOII_01587 1.9e-47 yhbY J RNA-binding protein
NDHIOOII_01588 4.8e-122 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NDHIOOII_01589 3.9e-113 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
NDHIOOII_01590 2.4e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NDHIOOII_01591 1.9e-138 yqeM Q Methyltransferase
NDHIOOII_01592 2e-208 ylbM S Belongs to the UPF0348 family
NDHIOOII_01593 2.9e-99 yceD S Uncharacterized ACR, COG1399
NDHIOOII_01594 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
NDHIOOII_01595 6.8e-56 K transcriptional regulator PadR family
NDHIOOII_01596 5.3e-78 XK27_06920 S Protein of unknown function (DUF1700)
NDHIOOII_01597 4.4e-135 S Putative adhesin
NDHIOOII_01598 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
NDHIOOII_01599 1.2e-199 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NDHIOOII_01600 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NDHIOOII_01601 5.1e-41 K transcriptional regulator
NDHIOOII_01602 2.1e-58 K transcriptional regulator
NDHIOOII_01603 1.3e-297 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
NDHIOOII_01604 2.5e-36 copZ P PFAM Heavy metal transport detoxification protein
NDHIOOII_01605 7e-98 dps P Belongs to the Dps family
NDHIOOII_01606 1.4e-110 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
NDHIOOII_01607 8.3e-46 L Plasmid pRiA4b ORF-3-like protein
NDHIOOII_01608 3.2e-19 S Domain of unknown function (DUF4767)
NDHIOOII_01609 1e-120 agrA K LytTr DNA-binding domain
NDHIOOII_01610 2.9e-182 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
NDHIOOII_01611 9.5e-183 iunH2 3.2.2.1 F nucleoside hydrolase
NDHIOOII_01612 1.1e-136 IQ KR domain
NDHIOOII_01613 3.3e-133 S membrane transporter protein
NDHIOOII_01614 1.2e-166 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
NDHIOOII_01615 1.7e-185 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
NDHIOOII_01616 1.1e-178
NDHIOOII_01617 4e-130 cobB K SIR2 family
NDHIOOII_01619 3.6e-162 yunF F Protein of unknown function DUF72
NDHIOOII_01620 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDHIOOII_01621 2.4e-155 tatD L hydrolase, TatD family
NDHIOOII_01622 2.6e-200 dacA 3.4.16.4 M Belongs to the peptidase S11 family
NDHIOOII_01623 6.1e-125 S Alpha beta hydrolase
NDHIOOII_01624 7.1e-206 gldA 1.1.1.6 C dehydrogenase
NDHIOOII_01625 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NDHIOOII_01626 1.3e-41
NDHIOOII_01627 3.2e-126 pgm3 G phosphoglycerate mutase family
NDHIOOII_01628 2.2e-282 S C4-dicarboxylate anaerobic carrier
NDHIOOII_01629 3.5e-250 nhaC C Na H antiporter NhaC
NDHIOOII_01630 1.6e-241 pbuX F xanthine permease
NDHIOOII_01631 4e-275 pipD E Dipeptidase
NDHIOOII_01632 1.5e-166 corA P CorA-like Mg2+ transporter protein
NDHIOOII_01633 1.8e-167 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
NDHIOOII_01634 2.3e-131 terC P membrane
NDHIOOII_01635 7.2e-55 trxA O Belongs to the thioredoxin family
NDHIOOII_01636 9.8e-239 mepA V MATE efflux family protein
NDHIOOII_01637 8.9e-56 K Transcriptional regulator, ArsR family
NDHIOOII_01638 4.1e-93 P Cadmium resistance transporter
NDHIOOII_01639 2e-135 XK27_08845 S ABC transporter, ATP-binding protein
NDHIOOII_01640 1.1e-153 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
NDHIOOII_01641 9.8e-183 ABC-SBP S ABC transporter
NDHIOOII_01642 8.8e-165 fecB P Periplasmic binding protein
NDHIOOII_01643 1.8e-128 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
NDHIOOII_01644 4.6e-129 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NDHIOOII_01645 7.3e-77 S Flavodoxin
NDHIOOII_01646 9.1e-63 moaE 2.8.1.12 H MoaE protein
NDHIOOII_01647 1.5e-31 moaD 2.8.1.12 H ThiS family
NDHIOOII_01648 3.6e-216 narK P Transporter, major facilitator family protein
NDHIOOII_01649 3.2e-140 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
NDHIOOII_01650 1.5e-172
NDHIOOII_01651 1.2e-18
NDHIOOII_01652 1.3e-58 nreC K PFAM regulatory protein LuxR
NDHIOOII_01653 1.1e-264 npp S type I phosphodiesterase nucleotide pyrophosphatase
NDHIOOII_01654 7.1e-231 yxiO S Vacuole effluxer Atg22 like
NDHIOOII_01656 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NDHIOOII_01657 3.9e-34
NDHIOOII_01658 1.5e-289 mntH P H( )-stimulated, divalent metal cation uptake system
NDHIOOII_01659 4.4e-144 U TraM recognition site of TraD and TraG
NDHIOOII_01660 7.8e-48
NDHIOOII_01661 5.2e-08
NDHIOOII_01663 8.4e-29
NDHIOOII_01664 6.3e-194 U type IV secretory pathway VirB4
NDHIOOII_01665 3.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NDHIOOII_01666 2.1e-140 tcyA ET Belongs to the bacterial solute-binding protein 3 family
NDHIOOII_01667 1.7e-267 pepC 3.4.22.40 E Peptidase C1-like family
NDHIOOII_01668 8.4e-125 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NDHIOOII_01669 3.8e-50 HA62_12640 S GCN5-related N-acetyl-transferase
NDHIOOII_01670 1.6e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
NDHIOOII_01671 7.8e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NDHIOOII_01672 9.5e-206 yacL S domain protein
NDHIOOII_01673 9.1e-220 patA 2.6.1.1 E Aminotransferase
NDHIOOII_01674 1.7e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
NDHIOOII_01675 2.3e-153 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NDHIOOII_01676 5.1e-237 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
NDHIOOII_01677 2.3e-30 S Protein of unknown function (DUF2929)
NDHIOOII_01678 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
NDHIOOII_01679 1.4e-267 G Major Facilitator
NDHIOOII_01680 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
NDHIOOII_01681 2.8e-207 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
NDHIOOII_01682 3.7e-91 tag 3.2.2.20 L glycosylase
NDHIOOII_01683 2.1e-216 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NDHIOOII_01684 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
NDHIOOII_01685 2.2e-41
NDHIOOII_01686 8.3e-304 ytgP S Polysaccharide biosynthesis protein
NDHIOOII_01687 1e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NDHIOOII_01688 1e-37
NDHIOOII_01690 0.0 snf 2.7.11.1 KL domain protein
NDHIOOII_01691 4.8e-145 ywqE 3.1.3.48 GM PHP domain protein
NDHIOOII_01692 9e-11 S Domain of unknown function (DUF771)
NDHIOOII_01694 6.5e-20 L Psort location Cytoplasmic, score
NDHIOOII_01697 1e-12
NDHIOOII_01707 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
NDHIOOII_01708 3.1e-69
NDHIOOII_01709 6.8e-104 fic D Fic/DOC family
NDHIOOII_01710 1.5e-121 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NDHIOOII_01711 1e-104 M lysozyme activity
NDHIOOII_01716 6.8e-97 S N-acetylmuramoyl-L-alanine amidase activity
NDHIOOII_01717 3e-277 S Phage minor structural protein
NDHIOOII_01718 1.7e-70 S Phage tail protein
NDHIOOII_01719 6.8e-254 M Phage tail tape measure protein TP901
NDHIOOII_01720 1e-19
NDHIOOII_01721 1.4e-73 S Phage tail tube protein
NDHIOOII_01722 6.1e-48
NDHIOOII_01723 1.1e-42
NDHIOOII_01724 6.8e-33 S Phage head-tail joining protein
NDHIOOII_01725 1.7e-47 S Phage gp6-like head-tail connector protein
NDHIOOII_01727 1.8e-151 S Phage capsid family
NDHIOOII_01728 4.7e-88 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NDHIOOII_01730 2.2e-96 S reductase
NDHIOOII_01731 4.9e-226 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
NDHIOOII_01732 7.5e-155 glcU U sugar transport
NDHIOOII_01733 2.1e-148 E Glyoxalase-like domain
NDHIOOII_01734 2.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NDHIOOII_01735 2.7e-255 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
NDHIOOII_01736 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NDHIOOII_01737 2.4e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NDHIOOII_01738 2.4e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
NDHIOOII_01739 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NDHIOOII_01741 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NDHIOOII_01742 7e-240 glpT G Major Facilitator Superfamily
NDHIOOII_01743 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NDHIOOII_01744 8.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NDHIOOII_01745 1.7e-215 iscS2 2.8.1.7 E Aminotransferase class V
NDHIOOII_01746 1.3e-251 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
NDHIOOII_01747 7e-113 nreC K PFAM regulatory protein LuxR
NDHIOOII_01748 1.6e-160 hipB K Helix-turn-helix
NDHIOOII_01749 2.8e-57 yitW S Iron-sulfur cluster assembly protein
NDHIOOII_01750 1.4e-270 sufB O assembly protein SufB
NDHIOOII_01751 3.2e-80 nifU C SUF system FeS assembly protein, NifU family
NDHIOOII_01752 3.3e-236 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NDHIOOII_01753 7.8e-241 sufD O FeS assembly protein SufD
NDHIOOII_01754 6.5e-145 sufC O FeS assembly ATPase SufC
NDHIOOII_01755 2.8e-157 mleR K LysR family
NDHIOOII_01756 2.3e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NDHIOOII_01757 1.3e-204 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
NDHIOOII_01758 8.6e-295 L PFAM plasmid pRiA4b ORF-3 family protein
NDHIOOII_01759 3.2e-169 L transposase, IS605 OrfB family
NDHIOOII_01760 9.3e-264 S Uncharacterized protein conserved in bacteria (DUF2252)
NDHIOOII_01761 1.7e-153 vicX 3.1.26.11 S domain protein
NDHIOOII_01762 3.2e-150 yycI S YycH protein
NDHIOOII_01763 6.6e-248 yycH S YycH protein
NDHIOOII_01764 0.0 vicK 2.7.13.3 T Histidine kinase
NDHIOOII_01765 3.1e-130 K response regulator
NDHIOOII_01767 2.4e-276 lmrA 3.6.3.44 V ABC transporter
NDHIOOII_01768 1.5e-95 L nuclease
NDHIOOII_01769 5.6e-112 luxA C Luciferase-like monooxygenase
NDHIOOII_01770 1.3e-200 sbcC L Putative exonuclease SbcCD, C subunit
NDHIOOII_01771 6.5e-219 sbcC L Putative exonuclease SbcCD, C subunit
NDHIOOII_01772 1.2e-208 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
NDHIOOII_01773 5.8e-79 M Glycosyl hydrolases family 25
NDHIOOII_01774 3e-148 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
NDHIOOII_01775 7.1e-273 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
NDHIOOII_01776 1.1e-159 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
NDHIOOII_01777 8.5e-42 citD C Covalent carrier of the coenzyme of citrate lyase
NDHIOOII_01778 7.4e-149 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
NDHIOOII_01779 7.9e-176 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
NDHIOOII_01780 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NDHIOOII_01781 7.4e-160 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
NDHIOOII_01782 7.9e-103 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NDHIOOII_01783 4.3e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NDHIOOII_01784 8.3e-225 dnaB L replication initiation and membrane attachment
NDHIOOII_01785 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
NDHIOOII_01786 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
NDHIOOII_01787 8.7e-99 narJ C nitrate reductase molybdenum cofactor assembly chaperone
NDHIOOII_01788 3.4e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NDHIOOII_01789 7.9e-175
NDHIOOII_01790 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NDHIOOII_01791 3.7e-243 purD 6.3.4.13 F Belongs to the GARS family
NDHIOOII_01792 1e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
NDHIOOII_01793 1.1e-104 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NDHIOOII_01794 2.5e-197 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
NDHIOOII_01795 3.1e-278 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NDHIOOII_01796 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NDHIOOII_01797 3.1e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NDHIOOII_01798 1.8e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NDHIOOII_01799 3.3e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
NDHIOOII_01800 1.5e-252 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NDHIOOII_01801 3e-215 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NDHIOOII_01802 1.1e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NDHIOOII_01803 2.1e-101 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
NDHIOOII_01804 5.8e-172 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
NDHIOOII_01805 2.2e-186 thrC 4.2.3.1 E Threonine synthase
NDHIOOII_01806 1.6e-260 G Major Facilitator
NDHIOOII_01807 3.5e-180 K Transcriptional regulator, LacI family
NDHIOOII_01808 1.6e-268 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NDHIOOII_01809 5.4e-101 nqr 1.5.1.36 S reductase
NDHIOOII_01810 5.1e-197 XK27_09615 S reductase
NDHIOOII_01811 1.3e-256 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
NDHIOOII_01812 9.3e-197 asnA 6.3.1.1 F aspartate--ammonia ligase
NDHIOOII_01813 1.2e-92 folT S ECF transporter, substrate-specific component
NDHIOOII_01814 0.0 pepN 3.4.11.2 E aminopeptidase
NDHIOOII_01815 9.9e-112 ylbE GM NAD dependent epimerase dehydratase family protein
NDHIOOII_01816 1.1e-101 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NDHIOOII_01817 2.9e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NDHIOOII_01818 7.7e-106 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NDHIOOII_01819 2.9e-137 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NDHIOOII_01820 4.7e-63 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
NDHIOOII_01821 1.4e-164 xerD D recombinase XerD
NDHIOOII_01822 9.3e-169 cvfB S S1 domain
NDHIOOII_01823 2.1e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
NDHIOOII_01824 7.7e-130 ponA V Beta-lactamase enzyme family
NDHIOOII_01825 6.5e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
NDHIOOII_01826 7e-215 uhpT EGP Major facilitator Superfamily
NDHIOOII_01827 1.4e-256 ytjP 3.5.1.18 E Dipeptidase
NDHIOOII_01828 2.2e-230 arcD S C4-dicarboxylate anaerobic carrier
NDHIOOII_01829 4.3e-209 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
NDHIOOII_01830 2.7e-293 M transferase activity, transferring glycosyl groups
NDHIOOII_01831 3.1e-289 asp2 3.4.11.5 S Accessory Sec system GspB-transporter
NDHIOOII_01832 4.8e-165 asp3 S Accessory Sec secretory system ASP3
NDHIOOII_01833 4.8e-46
NDHIOOII_01834 4.8e-87 2.7.6.5 T Region found in RelA / SpoT proteins
NDHIOOII_01835 1.5e-115 K response regulator
NDHIOOII_01836 6e-222 sptS 2.7.13.3 T Histidine kinase
NDHIOOII_01837 7.2e-209 yfeO P Voltage gated chloride channel
NDHIOOII_01838 9.6e-258 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
NDHIOOII_01839 9.5e-135 puuD S peptidase C26
NDHIOOII_01840 8.6e-81 uspA T universal stress protein
NDHIOOII_01841 0.0 tetP J elongation factor G
NDHIOOII_01842 3.1e-167 GK ROK family
NDHIOOII_01843 2.2e-241 brnQ U Component of the transport system for branched-chain amino acids
NDHIOOII_01844 3.8e-139 aroD S Serine hydrolase (FSH1)
NDHIOOII_01845 1e-151 yagE E amino acid
NDHIOOII_01846 1.1e-259 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
NDHIOOII_01847 1.4e-267 frdC 1.3.5.4 C FAD binding domain
NDHIOOII_01848 9.7e-132 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NDHIOOII_01849 1.2e-165 citP P Sodium:sulfate symporter transmembrane region
NDHIOOII_01850 4.7e-126 citR K sugar-binding domain protein
NDHIOOII_01851 4.4e-222 patA 2.6.1.1 E Aminotransferase
NDHIOOII_01852 1.6e-180 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NDHIOOII_01853 2.9e-75 osmC O OsmC-like protein
NDHIOOII_01855 1e-240 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NDHIOOII_01858 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NDHIOOII_01859 1.6e-163 S Tetratricopeptide repeat
NDHIOOII_01860 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NDHIOOII_01861 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NDHIOOII_01862 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
NDHIOOII_01863 2.5e-149 holA 2.7.7.7 L DNA polymerase III delta subunit

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)