ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDOJGJII_00001 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDOJGJII_00002 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDOJGJII_00003 1.1e-83 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDOJGJII_00004 5e-79 ylbE GM NAD dependent epimerase dehydratase family protein
PDOJGJII_00005 7.5e-126 rapZ S Displays ATPase and GTPase activities
PDOJGJII_00006 8.2e-153 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PDOJGJII_00007 6.7e-149 whiA K May be required for sporulation
PDOJGJII_00008 1.1e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDOJGJII_00010 1.1e-136 cggR K Putative sugar-binding domain
PDOJGJII_00011 1.3e-179 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDOJGJII_00012 1.3e-208 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PDOJGJII_00013 2.3e-128 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDOJGJII_00014 9.5e-234 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDOJGJII_00015 3.3e-119 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDOJGJII_00016 5e-104 K response regulator
PDOJGJII_00017 1.8e-169 T PhoQ Sensor
PDOJGJII_00018 6.7e-146 lmrP E Major Facilitator Superfamily
PDOJGJII_00019 6e-179 clcA P chloride
PDOJGJII_00020 2.8e-19 secG U Preprotein translocase
PDOJGJII_00021 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDOJGJII_00022 6.9e-70 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDOJGJII_00023 9.1e-42 yxjI
PDOJGJII_00024 1.8e-116 ycsE S Sucrose-6F-phosphate phosphohydrolase
PDOJGJII_00025 5.2e-106 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDOJGJII_00026 2e-143 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDOJGJII_00027 2.5e-56 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PDOJGJII_00028 3e-69 dnaQ 2.7.7.7 L DNA polymerase III
PDOJGJII_00029 1.2e-115 murB 1.3.1.98 M Cell wall formation
PDOJGJII_00030 7e-71 S Protein of unknown function (DUF1361)
PDOJGJII_00031 8.5e-127 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDOJGJII_00032 5.3e-68 ybbR S YbbR-like protein
PDOJGJII_00033 2.6e-226 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDOJGJII_00034 7.5e-29 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDOJGJII_00035 1.5e-130 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PDOJGJII_00036 3.2e-21 cutC P Participates in the control of copper homeostasis
PDOJGJII_00037 4e-197 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDOJGJII_00038 5.9e-164 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDOJGJII_00039 4.9e-61 ybaK J Aminoacyl-tRNA editing domain
PDOJGJII_00040 1.7e-98 rrmA 2.1.1.187 H Methyltransferase
PDOJGJII_00041 4.4e-86 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDOJGJII_00042 1.6e-284 ftsK D Belongs to the FtsK SpoIIIE SftA family
PDOJGJII_00043 3.5e-108 ymfF S Peptidase M16 inactive domain protein
PDOJGJII_00044 1.3e-147 ymfH S Peptidase M16
PDOJGJII_00045 8.4e-91 IQ Enoyl-(Acyl carrier protein) reductase
PDOJGJII_00046 2.9e-64 ymfM S Helix-turn-helix domain
PDOJGJII_00047 4.3e-85 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDOJGJII_00048 2.3e-159 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDOJGJII_00049 2.6e-182 rny S Endoribonuclease that initiates mRNA decay
PDOJGJII_00050 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDOJGJII_00051 6e-224 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDOJGJII_00052 7.3e-72 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDOJGJII_00053 6.3e-153 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDOJGJII_00054 2.1e-183 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDOJGJII_00055 2.9e-207 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDOJGJII_00056 1.8e-12 yajC U Preprotein translocase
PDOJGJII_00058 4.3e-61 uspA T universal stress protein
PDOJGJII_00060 2e-208 yfnA E Amino Acid
PDOJGJII_00061 3.5e-13 lutA C Cysteine-rich domain
PDOJGJII_00062 5.4e-82 lutA C Cysteine-rich domain
PDOJGJII_00063 2.1e-245 lutB C 4Fe-4S dicluster domain
PDOJGJII_00064 3.2e-66 yrjD S LUD domain
PDOJGJII_00065 2.1e-147 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDOJGJII_00066 7.5e-13
PDOJGJII_00067 2.1e-121 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PDOJGJII_00068 3.9e-187 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDOJGJII_00069 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDOJGJII_00070 2.1e-36 yrzL S Belongs to the UPF0297 family
PDOJGJII_00071 1e-59 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDOJGJII_00072 1.9e-33 yrzB S Belongs to the UPF0473 family
PDOJGJII_00073 1.4e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PDOJGJII_00074 7.5e-15 cvpA S Colicin V production protein
PDOJGJII_00075 3.9e-310 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDOJGJII_00076 9.9e-41 trxA O Belongs to the thioredoxin family
PDOJGJII_00077 1.1e-60 yslB S Protein of unknown function (DUF2507)
PDOJGJII_00078 2.2e-73 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDOJGJII_00079 5.1e-42 S Phosphoesterase
PDOJGJII_00082 1.2e-140 hprA 1.1.1.29 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDOJGJII_00083 2.8e-305 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDOJGJII_00084 1.8e-213 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDOJGJII_00085 6.2e-199 oatA I Acyltransferase
PDOJGJII_00086 1.4e-16
PDOJGJII_00088 8.9e-141 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDOJGJII_00089 6.5e-100 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PDOJGJII_00090 4e-219 recJ L Single-stranded-DNA-specific exonuclease RecJ
PDOJGJII_00091 1.3e-80 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDOJGJII_00092 1.2e-296 S membrane
PDOJGJII_00093 2.6e-278 pbp2b 3.4.16.4 M Penicillin-binding Protein
PDOJGJII_00094 1.8e-27 S Protein of unknown function (DUF3290)
PDOJGJII_00095 3.3e-75 yviA S Protein of unknown function (DUF421)
PDOJGJII_00097 2.6e-125 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDOJGJII_00098 7.7e-200 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDOJGJII_00099 3.7e-54 tag 3.2.2.20 L glycosylase
PDOJGJII_00100 3.2e-73 usp6 T universal stress protein
PDOJGJII_00102 5.1e-184 rarA L recombination factor protein RarA
PDOJGJII_00103 3.4e-24 yueI S Protein of unknown function (DUF1694)
PDOJGJII_00104 7.5e-101 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDOJGJII_00105 7.1e-56 ytsP 1.8.4.14 T GAF domain-containing protein
PDOJGJII_00106 1.3e-174 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDOJGJII_00107 6.4e-162 iscS2 2.8.1.7 E Aminotransferase class V
PDOJGJII_00108 1.9e-196 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDOJGJII_00109 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDOJGJII_00110 1.1e-136 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDOJGJII_00111 3.1e-79 radC L DNA repair protein
PDOJGJII_00112 4.5e-21 K Cold shock
PDOJGJII_00113 3.6e-156 mreB D cell shape determining protein MreB
PDOJGJII_00114 2.1e-88 mreC M Involved in formation and maintenance of cell shape
PDOJGJII_00115 1.5e-54 mreD M rod shape-determining protein MreD
PDOJGJII_00116 2.9e-77 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PDOJGJII_00117 1.8e-126 minD D Belongs to the ParA family
PDOJGJII_00118 1.9e-94 glnP P ABC transporter permease
PDOJGJII_00119 1.8e-89 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDOJGJII_00120 3.7e-109 aatB ET ABC transporter substrate-binding protein
PDOJGJII_00121 9.8e-100 D Alpha beta
PDOJGJII_00123 1.2e-155 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PDOJGJII_00124 2.2e-07 S Protein of unknown function (DUF3397)
PDOJGJII_00125 1.5e-55 mraZ K Belongs to the MraZ family
PDOJGJII_00126 8e-142 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDOJGJII_00127 2.5e-11 ftsL D cell division protein FtsL
PDOJGJII_00128 4e-282 ftsI 3.4.16.4 M Penicillin-binding Protein
PDOJGJII_00129 1.1e-135 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDOJGJII_00130 2.2e-185 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDOJGJII_00131 1.2e-152 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDOJGJII_00132 1.3e-61 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDOJGJII_00133 5.2e-190 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDOJGJII_00134 9.8e-180 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDOJGJII_00135 5e-33 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDOJGJII_00136 3e-19 yggT S YGGT family
PDOJGJII_00137 1.7e-81 ylmH S S4 domain protein
PDOJGJII_00138 1.1e-61 divIVA D DivIVA domain protein
PDOJGJII_00139 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDOJGJII_00140 2.5e-102 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDOJGJII_00141 4.4e-74 draG O ADP-ribosylglycohydrolase
PDOJGJII_00143 5.7e-85 2.7.7.12 C Domain of unknown function (DUF4931)
PDOJGJII_00144 1.1e-92 T Calcineurin-like phosphoesterase superfamily domain
PDOJGJII_00145 4.2e-49 lytE M LysM domain protein
PDOJGJII_00146 5e-19 glpE P Rhodanese Homology Domain
PDOJGJII_00147 2.4e-27 xlyB 3.5.1.28 CBM50 M LysM domain
PDOJGJII_00148 5.3e-160 asnA 6.3.1.1 F aspartate--ammonia ligase
PDOJGJII_00149 7.9e-194 cydA 1.10.3.14 C ubiquinol oxidase
PDOJGJII_00150 2.5e-141 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PDOJGJII_00151 2.7e-204 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PDOJGJII_00152 2.3e-219 cydD CO ABC transporter transmembrane region
PDOJGJII_00153 2.4e-96 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDOJGJII_00154 7.5e-105 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PDOJGJII_00155 2.9e-157 ndh 1.6.99.3 C NADH dehydrogenase
PDOJGJII_00156 1.8e-144 pbuO_1 S Permease family
PDOJGJII_00158 4.9e-32 2.7.7.65 T GGDEF domain
PDOJGJII_00159 3.6e-127 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
PDOJGJII_00160 7.9e-181
PDOJGJII_00161 6.5e-205 S Protein conserved in bacteria
PDOJGJII_00162 1.5e-201 ydaM M Glycosyl transferase family group 2
PDOJGJII_00163 3.9e-75 ydaN S Bacterial cellulose synthase subunit
PDOJGJII_00164 7.9e-221 ydaN S Bacterial cellulose synthase subunit
PDOJGJII_00165 1.4e-113 2.7.7.65 T diguanylate cyclase activity
PDOJGJII_00166 1.7e-38 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
PDOJGJII_00167 1.1e-50 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PDOJGJII_00168 2.2e-307 L Helicase C-terminal domain protein
PDOJGJII_00169 2.3e-59 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
PDOJGJII_00170 0.0 rafA 3.2.1.22 G alpha-galactosidase
PDOJGJII_00171 6.4e-52 S Membrane
PDOJGJII_00172 1.6e-64 K helix_turn_helix, arabinose operon control protein
PDOJGJII_00173 7.3e-44
PDOJGJII_00174 1.7e-204 pipD E Dipeptidase
PDOJGJII_00175 1.1e-23 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PDOJGJII_00176 2.6e-191 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDOJGJII_00177 2.1e-59 speG J Acetyltransferase (GNAT) domain
PDOJGJII_00178 1e-113 yitU 3.1.3.104 S hydrolase
PDOJGJII_00179 1.8e-83 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PDOJGJII_00180 8.1e-81
PDOJGJII_00181 1.3e-177 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PDOJGJII_00182 3e-42 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PDOJGJII_00183 5.3e-48 cps4C M Chain length determinant protein
PDOJGJII_00184 9.4e-65 cpsD D AAA domain
PDOJGJII_00185 7.2e-222 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 M Psort location CytoplasmicMembrane, score
PDOJGJII_00186 2.8e-168 2.6.1.102 M Belongs to the DegT DnrJ EryC1 family
PDOJGJII_00187 1.6e-77 epsL M Bacterial sugar transferase
PDOJGJII_00188 2.2e-25 pglD 2.3.1.203 S Bacterial transferase hexapeptide (six repeats)
PDOJGJII_00189 1.2e-120 2.4.1.52 GT4 M Glycosyl transferases group 1
PDOJGJII_00190 3.6e-80 gtf1 2.4.1.52 GT4 M glycosyl transferase group 1
PDOJGJII_00191 3.2e-76 gtf1 2.4.1.52 GT4 M glycosyl transferase group 1
PDOJGJII_00192 2.9e-74 M Glycosyltransferase Family 4
PDOJGJII_00193 3.3e-41 GT2 S Glycosyltransferase, group 2 family protein
PDOJGJII_00194 9.7e-57 pglI 2.4.1.293 GT2 M Glycosyltransferase like family 2
PDOJGJII_00196 5.4e-53
PDOJGJII_00197 2.1e-117 S Glycosyltransferase WbsX
PDOJGJII_00198 2.3e-60 cps1B GT2,GT4 M Glycosyl transferases group 1
PDOJGJII_00199 1.4e-103 cps2I S Psort location CytoplasmicMembrane, score
PDOJGJII_00200 8e-146 lspL 5.1.3.6 GM RmlD substrate binding domain
PDOJGJII_00201 3.5e-166 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDOJGJII_00202 4.5e-64 M Glycosyl transferases group 1
PDOJGJII_00203 5.6e-126 M Glycosyl transferases group 1
PDOJGJII_00205 6.3e-09
PDOJGJII_00206 3.4e-83 qorB 1.6.5.2 GM NmrA-like family
PDOJGJII_00207 2.1e-39 K Transcriptional regulator
PDOJGJII_00208 2.7e-30 S CHY zinc finger
PDOJGJII_00209 1.3e-86 1.1.1.1 C Zinc-binding dehydrogenase
PDOJGJII_00210 3.4e-41 S Protein of unknown function (DUF1211)
PDOJGJII_00211 3.6e-26 ybl78 L Conserved phage C-terminus (Phg_2220_C)
PDOJGJII_00213 1.3e-40 wecD M Acetyltransferase (GNAT) family
PDOJGJII_00214 1.4e-74 cps2D 5.1.3.2 M RmlD substrate binding domain
PDOJGJII_00215 1.1e-64 H Methyltransferase domain
PDOJGJII_00217 1.3e-16 K DNA-templated transcription, initiation
PDOJGJII_00219 2.9e-08 S Protein of unknown function (DUF2922)
PDOJGJII_00222 8.3e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDOJGJII_00223 1e-27 ysxB J Cysteine protease Prp
PDOJGJII_00224 1.6e-42 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PDOJGJII_00226 1.3e-99 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PDOJGJII_00227 4.5e-179 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PDOJGJII_00228 6e-123 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PDOJGJII_00229 7e-79 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PDOJGJII_00230 7.8e-218 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PDOJGJII_00231 4.6e-37 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDOJGJII_00232 7e-59 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDOJGJII_00233 1.1e-56 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDOJGJII_00234 5.8e-100 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDOJGJII_00235 4.5e-58 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDOJGJII_00236 4.1e-51 yeaL S Protein of unknown function (DUF441)
PDOJGJII_00237 2.4e-124 cvfB S S1 domain
PDOJGJII_00238 4.3e-113 xerD D recombinase XerD
PDOJGJII_00239 1.1e-293 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PDOJGJII_00240 1.8e-76 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDOJGJII_00241 2.9e-168 nhaC C Na H antiporter NhaC
PDOJGJII_00242 6.4e-09 nhaC C Na H antiporter NhaC
PDOJGJII_00243 3.5e-65 ypsA S Belongs to the UPF0398 family
PDOJGJII_00244 1.4e-197 ade 3.5.4.2 F Adenine deaminase C-terminal domain
PDOJGJII_00246 4.8e-73 2.3.1.178 M GNAT acetyltransferase
PDOJGJII_00247 2.5e-67 maa 2.3.1.79 S Maltose acetyltransferase
PDOJGJII_00248 5.7e-57 3.6.1.27 I Acid phosphatase homologues
PDOJGJII_00249 6.9e-81 XK27_07525 3.6.1.55 F Hydrolase, nudix family
PDOJGJII_00251 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PDOJGJII_00252 4e-202 hsdM 2.1.1.72 V type I restriction-modification system
PDOJGJII_00253 2.2e-14 K LysR substrate binding domain
PDOJGJII_00254 8.3e-121 MA20_14895 S Conserved hypothetical protein 698
PDOJGJII_00255 1.1e-199 nupG F Nucleoside
PDOJGJII_00256 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDOJGJII_00257 2.2e-49 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDOJGJII_00258 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PDOJGJII_00259 2.1e-204 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDOJGJII_00260 3.9e-159 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDOJGJII_00261 9e-20 yaaA S S4 domain protein YaaA
PDOJGJII_00262 9.3e-153 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDOJGJII_00263 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDOJGJII_00264 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDOJGJII_00265 4.8e-45 rpsF J Binds together with S18 to 16S ribosomal RNA
PDOJGJII_00266 3.3e-63 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDOJGJII_00267 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDOJGJII_00268 2.5e-110 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PDOJGJII_00269 7.3e-117 S Glycosyl transferase family 2
PDOJGJII_00270 7.4e-64 D peptidase
PDOJGJII_00271 0.0 asnB 6.3.5.4 E Asparagine synthase
PDOJGJII_00272 1.9e-47 yiiE S Protein of unknown function (DUF1211)
PDOJGJII_00273 7.8e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDOJGJII_00274 6.3e-247 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDOJGJII_00275 3.6e-17 yneR
PDOJGJII_00276 8.7e-231 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDOJGJII_00277 4.9e-224 yxbA 6.3.1.12 S ATP-grasp enzyme
PDOJGJII_00278 2.4e-106 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PDOJGJII_00279 9.9e-153 mdtG EGP Major facilitator Superfamily
PDOJGJII_00280 1e-14 yobS K transcriptional regulator
PDOJGJII_00281 2.8e-109 glcU U sugar transport
PDOJGJII_00282 3.4e-170 yjjP S Putative threonine/serine exporter
PDOJGJII_00283 1.4e-69 2.3.1.178 J Acetyltransferase (GNAT) domain
PDOJGJII_00284 3.7e-96 yicL EG EamA-like transporter family
PDOJGJII_00285 4.2e-40 pepF E Oligopeptidase F
PDOJGJII_00286 2e-157 pepF E Oligopeptidase F
PDOJGJII_00287 1.1e-103 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDOJGJII_00288 4.9e-178 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PDOJGJII_00289 6.6e-140 gldA 1.1.1.6 C Iron-containing alcohol dehydrogenase
PDOJGJII_00290 4.1e-61 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PDOJGJII_00291 4e-23 relB L RelB antitoxin
PDOJGJII_00293 2.9e-172 S Putative peptidoglycan binding domain
PDOJGJII_00294 1.2e-31 K Transcriptional regulator, MarR family
PDOJGJII_00295 1.4e-216 XK27_09600 V ABC transporter, ATP-binding protein
PDOJGJII_00296 1.4e-229 V ABC transporter transmembrane region
PDOJGJII_00298 9.1e-93 S Domain of unknown function DUF87
PDOJGJII_00300 7.9e-106 yxeH S hydrolase
PDOJGJII_00301 9e-114 K response regulator
PDOJGJII_00302 1.1e-272 vicK 2.7.13.3 T Histidine kinase
PDOJGJII_00303 4.6e-103 yycH S YycH protein
PDOJGJII_00304 5.6e-80 yycI S YycH protein
PDOJGJII_00305 1.8e-30 yyaQ S YjbR
PDOJGJII_00306 1.3e-116 vicX 3.1.26.11 S domain protein
PDOJGJII_00307 3.7e-145 htrA 3.4.21.107 O serine protease
PDOJGJII_00308 1.5e-72 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDOJGJII_00309 4.4e-40 1.6.5.2 GM NAD(P)H-binding
PDOJGJII_00310 3.3e-25 K MarR family transcriptional regulator
PDOJGJII_00311 5.9e-88 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PDOJGJII_00312 2e-46 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDOJGJII_00314 9.4e-208 G glycerol-3-phosphate transporter
PDOJGJII_00315 7e-31 L Helix-turn-helix domain
PDOJGJII_00316 2.9e-24 L HTH-like domain
PDOJGJII_00317 8e-37 L Integrase core domain
PDOJGJII_00318 8.2e-216 L Probable transposase
PDOJGJII_00319 6e-60 ydcZ S Putative inner membrane exporter, YdcZ
PDOJGJII_00320 6.4e-87 S hydrolase
PDOJGJII_00321 2.5e-205 ywfO S HD domain protein
PDOJGJII_00322 9.8e-86 yfeJ 6.3.5.2 F glutamine amidotransferase
PDOJGJII_00323 1.8e-32 ywiB S Domain of unknown function (DUF1934)
PDOJGJII_00324 1e-41 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDOJGJII_00325 1.2e-288 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDOJGJII_00328 1e-200 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDOJGJII_00329 1.2e-188 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDOJGJII_00330 3.6e-41 rpmE2 J Ribosomal protein L31
PDOJGJII_00331 2.8e-61
PDOJGJII_00332 6e-255 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PDOJGJII_00334 8e-79 S Cell surface protein
PDOJGJII_00337 1.6e-180 pbuG S permease
PDOJGJII_00338 8.4e-65 S Uncharacterized protein conserved in bacteria (DUF2263)
PDOJGJII_00339 1.8e-179 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDOJGJII_00340 3.4e-208 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDOJGJII_00341 2.7e-30 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDOJGJII_00342 4.8e-146 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDOJGJII_00343 5.4e-13
PDOJGJII_00344 3.4e-48 ndoA L Toxic component of a toxin-antitoxin (TA) module
PDOJGJII_00345 2.5e-91 yunF F Protein of unknown function DUF72
PDOJGJII_00346 2.3e-156 nrnB S DHHA1 domain
PDOJGJII_00347 3.7e-43 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDOJGJII_00348 8.4e-59
PDOJGJII_00349 6e-49 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain (presumed)
PDOJGJII_00350 5.4e-23 S Cytochrome B5
PDOJGJII_00351 1.1e-19 sigH K DNA-templated transcription, initiation
PDOJGJII_00352 2.9e-68 recX 2.4.1.337 GT4 S Regulatory protein RecX
PDOJGJII_00353 3.6e-191 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDOJGJII_00354 2.6e-97 ygaC J Belongs to the UPF0374 family
PDOJGJII_00355 6.9e-92 yueF S AI-2E family transporter
PDOJGJII_00356 6.5e-158 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PDOJGJII_00357 1.4e-108 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PDOJGJII_00358 4e-279 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDOJGJII_00359 6.3e-36
PDOJGJII_00360 0.0 lacL 3.2.1.23 G -beta-galactosidase
PDOJGJII_00361 1.2e-288 lacS G Transporter
PDOJGJII_00362 5.9e-111 galR K Transcriptional regulator
PDOJGJII_00363 2.6e-179 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDOJGJII_00364 2.3e-163 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDOJGJII_00365 1.2e-200 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PDOJGJII_00366 0.0 rafA 3.2.1.22 G alpha-galactosidase
PDOJGJII_00367 3.3e-148 manN G system, mannose fructose sorbose family IID component
PDOJGJII_00368 3e-113 manY G PTS system
PDOJGJII_00369 6e-148 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PDOJGJII_00370 0.0 typA T GTP-binding protein TypA
PDOJGJII_00371 9.7e-77 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PDOJGJII_00372 1.7e-23 yktA S Belongs to the UPF0223 family
PDOJGJII_00373 3.7e-32 1.1.1.27 C L-malate dehydrogenase activity
PDOJGJII_00374 8.2e-86 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDOJGJII_00375 1.6e-24
PDOJGJII_00376 5e-23 ykzG S Belongs to the UPF0356 family
PDOJGJII_00377 1.5e-300 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDOJGJII_00378 2.3e-249 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDOJGJII_00379 5e-197 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDOJGJII_00380 6.6e-195 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDOJGJII_00381 1.4e-215 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDOJGJII_00382 4e-18 S Tetratricopeptide repeat
PDOJGJII_00383 3.8e-267 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDOJGJII_00384 5.3e-116 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDOJGJII_00385 5.6e-40 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDOJGJII_00386 1.8e-32 rpsT J Binds directly to 16S ribosomal RNA
PDOJGJII_00387 3e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDOJGJII_00388 7e-198 yfnA E amino acid
PDOJGJII_00389 5.7e-61 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
PDOJGJII_00390 7.3e-114 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDOJGJII_00391 1.9e-57 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDOJGJII_00392 1.1e-26 ylqC S Belongs to the UPF0109 family
PDOJGJII_00393 3.6e-42 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDOJGJII_00394 5e-204 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDOJGJII_00395 7e-40 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDOJGJII_00396 9.1e-149 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDOJGJII_00397 4.7e-211 smc D Required for chromosome condensation and partitioning
PDOJGJII_00398 2.5e-100 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDOJGJII_00399 7e-26 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDOJGJII_00400 1.6e-140 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDOJGJII_00401 3.3e-246 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDOJGJII_00402 3.7e-238 yloV S DAK2 domain fusion protein YloV
PDOJGJII_00403 4.5e-53 asp S Asp23 family, cell envelope-related function
PDOJGJII_00404 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PDOJGJII_00405 3.8e-58 thiN 2.7.6.2 H thiamine pyrophosphokinase
PDOJGJII_00406 1.8e-111 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDOJGJII_00407 3.4e-191 KLT serine threonine protein kinase
PDOJGJII_00408 3.3e-90 stp 3.1.3.16 T phosphatase
PDOJGJII_00409 6.4e-153 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDOJGJII_00410 5.8e-140 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDOJGJII_00411 2.4e-288 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDOJGJII_00412 4.4e-121 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDOJGJII_00413 2.5e-21 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDOJGJII_00414 1.1e-102 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PDOJGJII_00415 5.6e-94 2.7.1.89 M Phosphotransferase enzyme family
PDOJGJII_00416 7.9e-26 arsC 1.20.4.1 P Belongs to the ArsC family
PDOJGJII_00417 6.1e-187 rodA D Belongs to the SEDS family
PDOJGJII_00418 1.8e-12 S Protein of unknown function (DUF2969)
PDOJGJII_00419 1.2e-26 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PDOJGJII_00420 3.4e-167 mbl D Cell shape determining protein MreB Mrl
PDOJGJII_00421 1.3e-63
PDOJGJII_00423 2.7e-38 L COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PDOJGJII_00424 2.3e-22
PDOJGJII_00425 4.6e-57 spoVK O ATPase family associated with various cellular activities (AAA)
PDOJGJII_00427 2.2e-86 S overlaps another CDS with the same product name
PDOJGJII_00428 1e-124 S overlaps another CDS with the same product name
PDOJGJII_00429 4.5e-100 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDOJGJII_00430 1.2e-34 ytkL S Belongs to the UPF0173 family
PDOJGJII_00431 2.1e-18 ytkL S Beta-lactamase superfamily domain
PDOJGJII_00432 1.4e-290 ybiT S ABC transporter, ATP-binding protein
PDOJGJII_00433 6.7e-78 2.4.2.3 F Phosphorylase superfamily
PDOJGJII_00434 1.7e-24
PDOJGJII_00435 3.1e-113 dkg S reductase
PDOJGJII_00436 3.1e-20 rimL 1.1.1.25 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDOJGJII_00437 2.3e-168 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDOJGJII_00438 1.1e-192 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDOJGJII_00439 1.9e-47 EGP Transmembrane secretion effector
PDOJGJII_00440 5.2e-137 purR 2.4.2.7 F pur operon repressor
PDOJGJII_00441 6.6e-53 adhR K helix_turn_helix, mercury resistance
PDOJGJII_00442 3.9e-185 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDOJGJII_00443 4.4e-101 pfoS S Phosphotransferase system, EIIC
PDOJGJII_00444 9e-128 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDOJGJII_00445 1.5e-150 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PDOJGJII_00446 6.5e-197 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDOJGJII_00447 1.7e-201 argH 4.3.2.1 E argininosuccinate lyase
PDOJGJII_00449 3.5e-156 amtB P ammonium transporter
PDOJGJII_00450 4.8e-117 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDOJGJII_00451 8.2e-47 argR K Regulates arginine biosynthesis genes
PDOJGJII_00452 5.5e-134 arcT 2.6.1.1 E Cys/Met metabolism PLP-dependent enzyme
PDOJGJII_00453 3.7e-90 S Alpha/beta hydrolase of unknown function (DUF915)
PDOJGJII_00454 2.7e-22 veg S Biofilm formation stimulator VEG
PDOJGJII_00455 1.4e-132 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDOJGJII_00456 3.4e-87 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDOJGJII_00457 7.8e-103 tatD L hydrolase, TatD family
PDOJGJII_00458 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDOJGJII_00459 3.9e-128
PDOJGJII_00460 3.3e-151 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PDOJGJII_00461 7.2e-43 VPA1512 ET Bacterial extracellular solute-binding proteins, family 3
PDOJGJII_00462 7.9e-32 K Bacterial regulatory proteins, tetR family
PDOJGJII_00463 5.9e-104 ybhR V ABC transporter
PDOJGJII_00464 4.2e-82 ybhF_2 V AAA domain, putative AbiEii toxin, Type IV TA system
PDOJGJII_00465 1.6e-102 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDOJGJII_00466 6.7e-171 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDOJGJII_00467 9.3e-128 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDOJGJII_00468 2e-271 helD 3.6.4.12 L DNA helicase
PDOJGJII_00470 2e-46 S CRISPR-associated protein (Cas_Csn2)
PDOJGJII_00471 6.5e-37 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDOJGJII_00472 3.9e-106 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDOJGJII_00473 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PDOJGJII_00474 3.5e-48 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PDOJGJII_00475 2.4e-75 ung2 3.2.2.27 L Uracil-DNA glycosylase
PDOJGJII_00476 4.9e-165 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDOJGJII_00477 4.7e-130 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDOJGJII_00478 2.1e-70 mltD CBM50 M NlpC P60 family protein
PDOJGJII_00479 9.5e-16 S Protein of unknown function (DUF805)
PDOJGJII_00480 2.4e-52 manO S Domain of unknown function (DUF956)
PDOJGJII_00481 6.1e-147 manN G system, mannose fructose sorbose family IID component
PDOJGJII_00482 6.4e-116 manY G PTS system sorbose-specific iic component
PDOJGJII_00483 9e-152 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PDOJGJII_00484 1.1e-80 rbsB G sugar-binding domain protein
PDOJGJII_00485 1.5e-98 baeS T Histidine kinase
PDOJGJII_00486 3.9e-79 baeR K Bacterial regulatory proteins, luxR family
PDOJGJII_00487 2.8e-121 G Bacterial extracellular solute-binding protein
PDOJGJII_00488 1.2e-70 S Protein of unknown function (DUF554)
PDOJGJII_00489 5.1e-39 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDOJGJII_00490 1.9e-32 merR K MerR HTH family regulatory protein
PDOJGJII_00491 2.1e-197 lmrB EGP Major facilitator Superfamily
PDOJGJII_00492 9.1e-34 S Domain of unknown function (DUF4811)
PDOJGJII_00493 1.1e-41 S CAAX protease self-immunity
PDOJGJII_00494 2.2e-60 yceE S haloacid dehalogenase-like hydrolase
PDOJGJII_00495 7.6e-74 glcR K DeoR C terminal sensor domain
PDOJGJII_00496 2.8e-94 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDOJGJII_00497 2.1e-54 bioY S BioY family
PDOJGJII_00498 2.6e-32 S Predicted membrane protein (DUF2207)
PDOJGJII_00499 4.8e-59 S Predicted membrane protein (DUF2207)
PDOJGJII_00500 1.4e-19
PDOJGJII_00501 2.2e-34 M Glycosyltransferase group 2 family protein
PDOJGJII_00502 5.7e-54 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PDOJGJII_00503 4.8e-58 ktrA P TrkA-N domain
PDOJGJII_00504 1.2e-114 ntpJ P Potassium uptake protein
PDOJGJII_00505 2.6e-183 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PDOJGJII_00506 1e-281 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
PDOJGJII_00507 4.1e-217 scrB 3.2.1.26 GH32 G invertase
PDOJGJII_00508 3.9e-147 scrR K helix_turn _helix lactose operon repressor
PDOJGJII_00509 1.3e-114 htpX O Belongs to the peptidase M48B family
PDOJGJII_00510 3.3e-71 lemA S LemA family
PDOJGJII_00511 5.4e-55 L phosphatase homologous to the C-terminal domain of histone macroH2A1
PDOJGJII_00512 3.5e-26 S Sel1-like repeats.
PDOJGJII_00513 3.2e-45 yjcF K protein acetylation
PDOJGJII_00515 1.8e-254 yfiC V ABC transporter
PDOJGJII_00516 7.6e-223 lmrA V ABC transporter, ATP-binding protein
PDOJGJII_00517 3.4e-35 K Bacterial regulatory proteins, tetR family
PDOJGJII_00518 2.8e-245 yhcA V ABC transporter, ATP-binding protein
PDOJGJII_00519 5.3e-224 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDOJGJII_00520 3.9e-146 G Transporter, major facilitator family protein
PDOJGJII_00521 1.5e-91 lacX 5.1.3.3 G Aldose 1-epimerase
PDOJGJII_00522 3.3e-142 hpk31 2.7.13.3 T Histidine kinase
PDOJGJII_00523 2.5e-113 K response regulator
PDOJGJII_00524 5.2e-90 patB 4.4.1.8 E Aminotransferase, class I
PDOJGJII_00525 1.3e-91 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PDOJGJII_00526 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDOJGJII_00527 1.3e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDOJGJII_00528 6.1e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDOJGJII_00529 3.3e-23 pilD 3.4.23.43 NOU aspartic-type endopeptidase activity
PDOJGJII_00530 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDOJGJII_00531 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDOJGJII_00532 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDOJGJII_00533 1.6e-55 ctsR K Belongs to the CtsR family
PDOJGJII_00535 1.1e-119 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDOJGJII_00536 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDOJGJII_00537 6.3e-159 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDOJGJII_00538 2.1e-185 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDOJGJII_00539 2.2e-131 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PDOJGJII_00546 8.2e-219 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PDOJGJII_00547 1.7e-80 sip L Belongs to the 'phage' integrase family
PDOJGJII_00548 1.1e-44
PDOJGJII_00549 9.4e-55 S sequence-specific DNA binding
PDOJGJII_00550 4.7e-16
PDOJGJII_00554 5.4e-49 S Hypothetical protein (DUF2513)
PDOJGJII_00555 6.6e-19
PDOJGJII_00560 2.7e-77 S Siphovirus Gp157
PDOJGJII_00561 1.7e-238 res L Helicase C-terminal domain protein
PDOJGJII_00563 1.2e-116 L AAA domain
PDOJGJII_00564 5.3e-84
PDOJGJII_00565 4.3e-141 S Bifunctional DNA primase/polymerase, N-terminal
PDOJGJII_00566 8.4e-232 S Virulence-associated protein E
PDOJGJII_00567 2.4e-50 S VRR_NUC
PDOJGJII_00570 2.9e-60 Q DNA (cytosine-5-)-methyltransferase activity
PDOJGJII_00576 3.9e-28 arpU S Phage transcriptional regulator, ArpU family
PDOJGJII_00577 2.2e-33
PDOJGJII_00580 3.6e-53
PDOJGJII_00581 8.4e-166 S Terminase RNAseH like domain
PDOJGJII_00582 5.8e-142 S Phage portal protein, SPP1 Gp6-like
PDOJGJII_00583 5.3e-95 S Phage minor capsid protein 2
PDOJGJII_00585 8.2e-25 S Phage minor structural protein GP20
PDOJGJII_00586 5.5e-97 S T=7 icosahedral viral capsid
PDOJGJII_00589 7.5e-29 S Minor capsid protein
PDOJGJII_00590 7.9e-16 S Minor capsid protein
PDOJGJII_00591 1.3e-16 S Minor capsid protein from bacteriophage
PDOJGJII_00592 2e-38 N domain, Protein
PDOJGJII_00594 2.4e-38 S Bacteriophage Gp15 protein
PDOJGJII_00595 5.5e-105 M Phage tail tape measure protein TP901
PDOJGJII_00596 1.3e-60 S Phage tail protein
PDOJGJII_00597 1.8e-57 S Prophage endopeptidase tail
PDOJGJII_00599 1.4e-70 S Domain of unknown function (DUF2479)
PDOJGJII_00600 6.4e-10 S Glycosyl hydrolases family 25
PDOJGJII_00601 1.7e-49 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDOJGJII_00602 1.1e-68 coiA 3.6.4.12 S Competence protein
PDOJGJII_00603 1.9e-232 pepF E oligoendopeptidase F
PDOJGJII_00604 1e-41 yjbH Q Thioredoxin
PDOJGJII_00605 6.4e-98 pstS P Phosphate
PDOJGJII_00606 4.1e-119 pstC P probably responsible for the translocation of the substrate across the membrane
PDOJGJII_00607 5.1e-122 pstA P Phosphate transport system permease protein PstA
PDOJGJII_00608 4.5e-114 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDOJGJII_00609 4.7e-116 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDOJGJII_00610 2.7e-56 P Plays a role in the regulation of phosphate uptake
PDOJGJII_00611 6.8e-148 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PDOJGJII_00612 1.1e-79 S VIT family
PDOJGJII_00613 1.2e-83 S membrane
PDOJGJII_00614 2.5e-41 M1-874 K Domain of unknown function (DUF1836)
PDOJGJII_00615 2.3e-65 hly S protein, hemolysin III
PDOJGJII_00616 2.7e-34 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDOJGJII_00617 1.7e-74 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDOJGJII_00620 1.5e-13
PDOJGJII_00621 1.3e-172 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDOJGJII_00622 1.3e-158 ccpA K catabolite control protein A
PDOJGJII_00623 3.7e-42 S VanZ like family
PDOJGJII_00624 1.5e-119 yebC K Transcriptional regulatory protein
PDOJGJII_00625 2.1e-102 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDOJGJII_00626 4.7e-121 comGA NU Type II IV secretion system protein
PDOJGJII_00627 5.7e-98 comGB NU type II secretion system
PDOJGJII_00628 1.2e-27 comGC U competence protein ComGC
PDOJGJII_00629 1.5e-13
PDOJGJII_00631 5.5e-11 S Putative Competence protein ComGF
PDOJGJII_00633 7.6e-98 ytxK 2.1.1.72 L N-6 DNA Methylase
PDOJGJII_00634 1.6e-183 cycA E Amino acid permease
PDOJGJII_00635 3e-57 S Calcineurin-like phosphoesterase
PDOJGJII_00636 1.9e-53 yutD S Protein of unknown function (DUF1027)
PDOJGJII_00637 2.9e-113 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDOJGJII_00638 7.8e-32 S Protein of unknown function (DUF1461)
PDOJGJII_00639 5.1e-92 dedA S SNARE associated Golgi protein
PDOJGJII_00640 5.5e-96 trxB2 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PDOJGJII_00641 8.8e-50 yugI 5.3.1.9 J general stress protein
PDOJGJII_00642 1.8e-28 S Phage gp6-like head-tail connector protein
PDOJGJII_00643 3.1e-98
PDOJGJII_00644 7.4e-10 S Domain of unknown function (DUF4355)
PDOJGJII_00647 9.5e-17 S head morphogenesis protein, SPP1 gp7 family
PDOJGJII_00648 5.9e-187 mtnE 2.6.1.83 E Aminotransferase
PDOJGJII_00649 1.3e-81 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PDOJGJII_00650 1.3e-66 S Protein of unknown function (DUF1440)
PDOJGJII_00651 7.7e-41 S Iron-sulfur cluster assembly protein
PDOJGJII_00652 3.3e-113 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PDOJGJII_00653 5.9e-75 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PDOJGJII_00654 5.1e-207 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDOJGJII_00655 5.6e-153 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDOJGJII_00656 4e-64 G Xylose isomerase domain protein TIM barrel
PDOJGJII_00657 1.1e-53 ndk 2.7.4.6 F Belongs to the NDK family
PDOJGJII_00658 6.5e-90 nanK GK ROK family
PDOJGJII_00659 1.3e-127 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PDOJGJII_00660 2.5e-92 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PDOJGJII_00661 4.3e-75 K Helix-turn-helix domain, rpiR family
PDOJGJII_00662 1.5e-56 yphA GM NAD dependent epimerase/dehydratase family
PDOJGJII_00663 6.9e-217 yjeM E Amino Acid
PDOJGJII_00665 1.6e-31 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDOJGJII_00666 3.1e-233 tetP J elongation factor G
PDOJGJII_00668 1.3e-10 tcdC
PDOJGJII_00670 7.3e-102 L PLD-like domain
PDOJGJII_00673 1.4e-70 xerD L Phage integrase, N-terminal SAM-like domain
PDOJGJII_00674 3.7e-266 fbp 3.1.3.11 G phosphatase activity
PDOJGJII_00676 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDOJGJII_00677 3e-98 fabK 1.3.1.9 S Nitronate monooxygenase
PDOJGJII_00678 1.8e-162 ytbD EGP Major facilitator Superfamily
PDOJGJII_00679 5.2e-110 IQ NAD dependent epimerase/dehydratase family
PDOJGJII_00680 1.3e-103 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
PDOJGJII_00681 4.5e-43 gutM K Glucitol operon activator protein (GutM)
PDOJGJII_00682 4.8e-83 srlA G PTS system enzyme II sorbitol-specific factor
PDOJGJII_00683 1.1e-136 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PDOJGJII_00684 2.4e-36 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDOJGJII_00685 6.3e-64 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
PDOJGJII_00686 1.6e-102 ftsW D Belongs to the SEDS family
PDOJGJII_00687 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PDOJGJII_00688 1.1e-17 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PDOJGJII_00689 7.2e-74 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PDOJGJII_00690 4e-49 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDOJGJII_00691 2.4e-131 ylbL T Belongs to the peptidase S16 family
PDOJGJII_00692 2.2e-96 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PDOJGJII_00693 2.2e-30 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDOJGJII_00694 6.8e-103 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDOJGJII_00695 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDOJGJII_00696 2.1e-226 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDOJGJII_00697 2.4e-139 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PDOJGJII_00698 5.2e-75 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDOJGJII_00699 8.5e-234 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PDOJGJII_00700 1e-152 purD 6.3.4.13 F Belongs to the GARS family
PDOJGJII_00701 1.5e-93 S Acyltransferase family
PDOJGJII_00702 2.2e-194 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDOJGJII_00703 3.9e-122 K LysR substrate binding domain
PDOJGJII_00705 2.2e-20
PDOJGJII_00706 6.2e-59 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDOJGJII_00707 2.9e-267 argS 6.1.1.19 J Arginyl-tRNA synthetase
PDOJGJII_00708 1.4e-50 comEA L Competence protein ComEA
PDOJGJII_00709 2e-69 comEB 3.5.4.12 F ComE operon protein 2
PDOJGJII_00710 3.3e-154 comEC S Competence protein ComEC
PDOJGJII_00711 9.3e-104 holA 2.7.7.7 L DNA polymerase III delta subunit
PDOJGJII_00712 1.3e-113 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDOJGJII_00713 3e-137 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PDOJGJII_00714 2.8e-118 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PDOJGJII_00715 1.8e-93 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PDOJGJII_00716 3.9e-229 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PDOJGJII_00717 1.8e-36 ypmB S Protein conserved in bacteria
PDOJGJII_00718 1.2e-142 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PDOJGJII_00719 7.6e-236 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PDOJGJII_00720 5.1e-56 dnaD L DnaD domain protein
PDOJGJII_00721 4.4e-83 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDOJGJII_00722 5.8e-78 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDOJGJII_00723 9.6e-126 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDOJGJII_00724 1.9e-93 M transferase activity, transferring glycosyl groups
PDOJGJII_00725 1.4e-83 M Glycosyltransferase sugar-binding region containing DXD motif
PDOJGJII_00726 5.8e-100 epsJ1 M Glycosyltransferase like family 2
PDOJGJII_00729 1.1e-115 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PDOJGJII_00730 4.7e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PDOJGJII_00731 1.8e-56 yqeY S YqeY-like protein
PDOJGJII_00733 3.9e-68 xerD L Phage integrase, N-terminal SAM-like domain
PDOJGJII_00734 1e-106 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDOJGJII_00735 1.1e-107 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDOJGJII_00736 6.6e-133 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDOJGJII_00737 2.9e-276 yfmR S ABC transporter, ATP-binding protein
PDOJGJII_00738 4.4e-156 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDOJGJII_00739 3.2e-57 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDOJGJII_00740 8.6e-135 yvgN C Aldo keto reductase
PDOJGJII_00741 2.4e-35 K helix_turn_helix, mercury resistance
PDOJGJII_00742 1.3e-102 S Aldo keto reductase
PDOJGJII_00744 6.5e-80 ypmR E GDSL-like Lipase/Acylhydrolase
PDOJGJII_00745 2.2e-52 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PDOJGJII_00746 3.6e-24 yozE S Belongs to the UPF0346 family
PDOJGJII_00747 4.7e-133 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDOJGJII_00748 4.9e-97 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDOJGJII_00749 6.2e-85 dprA LU DNA protecting protein DprA
PDOJGJII_00750 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDOJGJII_00751 9.5e-210 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PDOJGJII_00752 5.8e-205 G PTS system Galactitol-specific IIC component
PDOJGJII_00753 5.1e-81 K Bacterial regulatory proteins, tetR family
PDOJGJII_00754 1.7e-116 yjjC V ATPases associated with a variety of cellular activities
PDOJGJII_00755 2.1e-203 M Exporter of polyketide antibiotics
PDOJGJII_00756 1.8e-100 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDOJGJII_00757 2.7e-35 S Repeat protein
PDOJGJII_00758 2e-277 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDOJGJII_00760 3.4e-91 L Belongs to the 'phage' integrase family
PDOJGJII_00761 4.3e-14 L Belongs to the 'phage' integrase family
PDOJGJII_00763 1.4e-22 dinG 2.7.7.7, 3.6.4.12 L DNA-directed DNA polymerase activity
PDOJGJII_00764 1.9e-13
PDOJGJII_00765 1.7e-17 L nuclease
PDOJGJII_00766 9.6e-28 S Short C-terminal domain
PDOJGJII_00768 8.4e-38 E Zn peptidase
PDOJGJII_00769 2.4e-37 K Helix-turn-helix XRE-family like proteins
PDOJGJII_00770 3.5e-10 XK27_07105 K Helix-turn-helix XRE-family like proteins
PDOJGJII_00773 3.8e-86 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDOJGJII_00774 2.1e-67 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDOJGJII_00775 9.1e-43 yodB K Transcriptional regulator, HxlR family
PDOJGJII_00776 7.4e-173 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDOJGJII_00777 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDOJGJII_00778 1.3e-125 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDOJGJII_00779 1.8e-97 udk 2.7.1.48 F Cytidine monophosphokinase
PDOJGJII_00780 2.2e-68 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDOJGJII_00781 6.4e-12
PDOJGJII_00782 1.5e-143 iunH2 3.2.2.1 F nucleoside hydrolase
PDOJGJII_00783 1.3e-42 XK27_03960 S Protein of unknown function (DUF3013)
PDOJGJII_00784 1.9e-116 prmA J Ribosomal protein L11 methyltransferase
PDOJGJII_00785 1.8e-77 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDOJGJII_00786 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDOJGJII_00787 1.7e-54 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDOJGJII_00788 2.5e-56 3.1.3.18 J HAD-hyrolase-like
PDOJGJII_00789 5.2e-43 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDOJGJII_00790 5.6e-129 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDOJGJII_00791 1.3e-75 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDOJGJII_00792 2.7e-204 pyrP F Permease
PDOJGJII_00793 2.8e-114 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDOJGJII_00794 2.9e-191 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDOJGJII_00795 2e-84 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDOJGJII_00796 2.3e-89 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDOJGJII_00797 8.3e-134 K Transcriptional regulator
PDOJGJII_00798 1.1e-143 ppaC 3.6.1.1 C inorganic pyrophosphatase
PDOJGJII_00799 8.6e-115 glcR K DeoR C terminal sensor domain
PDOJGJII_00800 4.5e-171 patA 2.6.1.1 E Aminotransferase
PDOJGJII_00801 2.4e-88 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDOJGJII_00803 1.1e-35 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDOJGJII_00804 6.1e-173 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PDOJGJII_00805 1.8e-36 rnhA 3.1.26.4 L Ribonuclease HI
PDOJGJII_00806 6.2e-21 S Family of unknown function (DUF5322)
PDOJGJII_00807 3.8e-256 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PDOJGJII_00808 8e-39
PDOJGJII_00813 2.8e-16 V PFAM secretion protein HlyD family protein
PDOJGJII_00815 8.7e-150 EGP Sugar (and other) transporter
PDOJGJII_00816 6e-78 trmK 2.1.1.217 S SAM-dependent methyltransferase
PDOJGJII_00817 2.8e-103 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDOJGJII_00818 1.9e-183 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDOJGJII_00819 4.2e-73 alkD L DNA alkylation repair enzyme
PDOJGJII_00820 3.8e-136 EG EamA-like transporter family
PDOJGJII_00821 3.6e-150 S Tetratricopeptide repeat protein
PDOJGJII_00822 2.4e-205 hisS 6.1.1.21 J histidyl-tRNA synthetase
PDOJGJII_00823 8.7e-299 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDOJGJII_00824 7e-127 corA P CorA-like Mg2+ transporter protein
PDOJGJII_00825 8.5e-161 nhaC C Na H antiporter NhaC
PDOJGJII_00826 1.6e-129 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDOJGJII_00827 2.2e-80 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PDOJGJII_00829 4.2e-92 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDOJGJII_00830 5.8e-155 iscS 2.8.1.7 E Aminotransferase class V
PDOJGJII_00831 3.7e-41 XK27_04120 S Putative amino acid metabolism
PDOJGJII_00832 3.7e-202 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDOJGJII_00833 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDOJGJII_00834 4.3e-15 S Protein of unknown function (DUF2929)
PDOJGJII_00835 0.0 dnaE 2.7.7.7 L DNA polymerase
PDOJGJII_00836 1.9e-167 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDOJGJII_00837 6.3e-310 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PDOJGJII_00839 2.2e-39 ypaA S Protein of unknown function (DUF1304)
PDOJGJII_00840 3.2e-83 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDOJGJII_00841 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDOJGJII_00842 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDOJGJII_00843 1.6e-201 FbpA K Fibronectin-binding protein
PDOJGJII_00844 3.1e-40 K Transcriptional regulator
PDOJGJII_00845 6.3e-117 degV S EDD domain protein, DegV family
PDOJGJII_00846 3e-70 lepB 3.4.21.89 U Signal peptidase, peptidase S26
PDOJGJII_00847 2.4e-40 6.3.3.2 S ASCH
PDOJGJII_00848 1.7e-187 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDOJGJII_00849 5.3e-81 yjjH S Calcineurin-like phosphoesterase
PDOJGJII_00850 1.8e-95 EG EamA-like transporter family
PDOJGJII_00851 2.5e-84 natB CP ABC-type Na efflux pump, permease component
PDOJGJII_00852 4e-111 natA S Domain of unknown function (DUF4162)
PDOJGJII_00853 6.2e-23 K Acetyltransferase (GNAT) domain
PDOJGJII_00855 8.5e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDOJGJII_00856 2.2e-227 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PDOJGJII_00857 2.7e-171 rpsA 1.17.7.4 J Ribosomal protein S1
PDOJGJII_00858 1.3e-59 arsC 1.20.4.1 T Low molecular weight phosphatase family
PDOJGJII_00859 2e-151 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDOJGJII_00860 4.9e-29 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDOJGJII_00861 1.4e-175 dltB M MBOAT, membrane-bound O-acyltransferase family
PDOJGJII_00862 1.2e-219 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDOJGJII_00863 2.6e-07 dltX S D-Ala-teichoic acid biosynthesis protein
PDOJGJII_00864 2e-90 recO L Involved in DNA repair and RecF pathway recombination
PDOJGJII_00865 4.6e-155 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDOJGJII_00866 2.8e-30 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PDOJGJII_00867 3e-60 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDOJGJII_00868 1.2e-153 phoH T phosphate starvation-inducible protein PhoH
PDOJGJII_00869 2.6e-83 lytH 3.5.1.28 M Ami_3
PDOJGJII_00870 2.6e-86 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PDOJGJII_00871 7.7e-12 M Lysin motif
PDOJGJII_00872 2.2e-127 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDOJGJII_00873 1.4e-59 ypbB 5.1.3.1 S Helix-turn-helix domain
PDOJGJII_00874 2.9e-221 mntH P H( )-stimulated, divalent metal cation uptake system
PDOJGJII_00875 1.3e-44 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PDOJGJII_00876 3.2e-120 ica2 GT2 M Glycosyl transferase family group 2
PDOJGJII_00877 4.8e-44
PDOJGJII_00878 1e-68 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDOJGJII_00879 3.7e-09 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDOJGJII_00881 2.8e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDOJGJII_00882 3.4e-213 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDOJGJII_00883 2.8e-280 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PDOJGJII_00884 3.7e-168 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PDOJGJII_00885 3.7e-109 pepE 3.4.13.21 E Alpha/beta hydrolase of unknown function (DUF915)
PDOJGJII_00886 2.6e-69 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDOJGJII_00887 1.9e-168 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PDOJGJII_00888 4.7e-210 glnP P ABC transporter
PDOJGJII_00890 2.9e-60 uspA T Universal stress protein family
PDOJGJII_00891 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
PDOJGJII_00892 1.1e-25
PDOJGJII_00893 9.8e-202 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PDOJGJII_00894 6.8e-109 puuD S peptidase C26
PDOJGJII_00895 4e-83 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDOJGJII_00896 5.6e-150 lsa S ABC transporter
PDOJGJII_00897 7.2e-149 mepA V MATE efflux family protein
PDOJGJII_00898 1.1e-216 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDOJGJII_00899 4.2e-302 hsdM 2.1.1.72 V Type I restriction-modification system
PDOJGJII_00900 2.4e-208 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDOJGJII_00901 3.4e-146 yegS 2.7.1.107 G Lipid kinase
PDOJGJII_00902 1.9e-256 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDOJGJII_00903 3.1e-233 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDOJGJII_00904 7.6e-38 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDOJGJII_00905 1.2e-160 camS S sex pheromone
PDOJGJII_00906 3.9e-279 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDOJGJII_00907 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PDOJGJII_00908 3.5e-144 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDOJGJII_00910 1.6e-26 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDOJGJII_00911 1.3e-14
PDOJGJII_00912 7.6e-275 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDOJGJII_00913 2.3e-133 coaA 2.7.1.33 F Pantothenic acid kinase
PDOJGJII_00914 3.5e-42 E lipolytic protein G-D-S-L family
PDOJGJII_00915 2.3e-112 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDOJGJII_00916 2.1e-189 glnPH2 P ABC transporter permease
PDOJGJII_00917 2.1e-213 yjeM E Amino Acid
PDOJGJII_00918 1.8e-32 yvdC S MazG nucleotide pyrophosphohydrolase domain
PDOJGJII_00919 5.1e-138 tetA EGP Major facilitator Superfamily
PDOJGJII_00921 3.1e-70 rny D Peptidase family M23
PDOJGJII_00922 2e-86 mesE M Transport protein ComB
PDOJGJII_00923 4e-282 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PDOJGJII_00926 5.6e-56 K LytTr DNA-binding domain
PDOJGJII_00927 1.8e-51 2.7.13.3 T GHKL domain
PDOJGJII_00933 9.2e-16
PDOJGJII_00935 7.2e-08
PDOJGJII_00936 6.6e-19
PDOJGJII_00937 5.9e-39 blpT
PDOJGJII_00938 3e-87 S Haloacid dehalogenase-like hydrolase
PDOJGJII_00939 1.8e-14
PDOJGJII_00941 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDOJGJII_00942 6.8e-26 ykuJ S Protein of unknown function (DUF1797)
PDOJGJII_00943 1.5e-130 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDOJGJII_00944 1.2e-127 cpoA GT4 M Glycosyltransferase, group 1 family protein
PDOJGJII_00945 3.9e-162 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PDOJGJII_00946 2.4e-285 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDOJGJII_00947 9.7e-37 ptsH G phosphocarrier protein HPR
PDOJGJII_00948 1.5e-15
PDOJGJII_00949 0.0 clpE O Belongs to the ClpA ClpB family
PDOJGJII_00950 3e-23 XK27_09445 S Domain of unknown function (DUF1827)
PDOJGJII_00951 5e-105 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
PDOJGJII_00952 3.1e-130 3.6.1.13, 3.6.1.55 F NUDIX domain
PDOJGJII_00953 6.2e-271 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDOJGJII_00954 1.8e-96 pncA Q Isochorismatase family
PDOJGJII_00955 1.9e-109 L hmm pf00665
PDOJGJII_00956 1.5e-23 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDOJGJII_00957 1.3e-89 saeS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDOJGJII_00958 5.1e-77 K response regulator
PDOJGJII_00960 1.3e-96 norB EGP Major Facilitator
PDOJGJII_00963 2e-09 S Domain of unknown function (DUF4176)
PDOJGJII_00965 7.2e-225 L Transposase
PDOJGJII_00967 1.3e-132 D CobQ CobB MinD ParA nucleotide binding domain protein
PDOJGJII_00968 3.6e-29 relB L RelB antitoxin
PDOJGJII_00969 1.4e-39 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PDOJGJII_00970 4.5e-168 repA S Replication initiator protein A
PDOJGJII_00971 8.5e-35
PDOJGJII_00972 4.9e-148 D CobQ CobB MinD ParA nucleotide binding domain protein
PDOJGJII_00973 7.6e-55 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PDOJGJII_00974 6.2e-48 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PDOJGJII_00975 9.2e-50 L Transposase and inactivated derivatives IS30 family
PDOJGJII_00976 2.5e-31 L Transposase
PDOJGJII_00977 8.9e-96 K Transcriptional regulator
PDOJGJII_00980 2.1e-07
PDOJGJII_00990 7.4e-177 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDOJGJII_00991 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDOJGJII_00992 2.4e-192 cycA E Amino acid permease
PDOJGJII_00993 2.4e-186 ytgP S Polysaccharide biosynthesis protein
PDOJGJII_00994 2.8e-62 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDOJGJII_00995 1.1e-81 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDOJGJII_00996 8.7e-193 pepV 3.5.1.18 E dipeptidase PepV
PDOJGJII_00997 6.4e-63 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
PDOJGJII_00998 1.6e-79 L Type III restriction enzyme, res subunit
PDOJGJII_00999 0.0 L Type III restriction enzyme, res subunit
PDOJGJII_01001 4e-36
PDOJGJII_01002 2.6e-66 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDOJGJII_01003 4.2e-61 marR K Transcriptional regulator, MarR family
PDOJGJII_01004 7.1e-101 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDOJGJII_01005 2.2e-27 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDOJGJII_01006 6.5e-104 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PDOJGJII_01007 6.5e-99 IQ reductase
PDOJGJII_01008 1.8e-194 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDOJGJII_01009 7.9e-47 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDOJGJII_01010 1.5e-63 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDOJGJII_01011 9.3e-216 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PDOJGJII_01012 2.7e-125 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDOJGJII_01013 2.3e-102 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PDOJGJII_01014 8.3e-14 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PDOJGJII_01015 1.4e-86 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PDOJGJII_01016 2.8e-229 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDOJGJII_01017 3.1e-240 pgi 5.3.1.9 G Belongs to the GPI family
PDOJGJII_01018 4.6e-302 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDOJGJII_01019 5.7e-119 gla U Major intrinsic protein
PDOJGJII_01020 5.8e-45 ykuL S CBS domain
PDOJGJII_01021 1.5e-60 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDOJGJII_01022 4.1e-177 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDOJGJII_01023 1.5e-86 ykuT M mechanosensitive ion channel
PDOJGJII_01025 5e-285 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDOJGJII_01026 2e-21 yheA S Belongs to the UPF0342 family
PDOJGJII_01027 5e-128 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDOJGJII_01028 6.6e-114 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDOJGJII_01030 5.4e-53 hit FG histidine triad
PDOJGJII_01031 1.3e-94 ecsA V ABC transporter, ATP-binding protein
PDOJGJII_01032 1.4e-71 ecsB U ABC transporter
PDOJGJII_01033 2.4e-99 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PDOJGJII_01034 7.9e-101 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDOJGJII_01035 4e-45 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PDOJGJII_01036 2.3e-76 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDOJGJII_01037 2.6e-239 sftA D Belongs to the FtsK SpoIIIE SftA family
PDOJGJII_01038 7.6e-223 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PDOJGJII_01039 2.5e-61 phaJ I N-terminal half of MaoC dehydratase
PDOJGJII_01040 6.7e-69 ybhL S Belongs to the BI1 family
PDOJGJII_01041 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDOJGJII_01042 3.3e-107 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDOJGJII_01043 2.1e-50 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDOJGJII_01044 6.1e-66 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDOJGJII_01045 1.6e-79 dnaB L replication initiation and membrane attachment
PDOJGJII_01046 2.2e-107 dnaI L Primosomal protein DnaI
PDOJGJII_01047 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDOJGJII_01048 1.3e-79 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDOJGJII_01049 1.4e-24 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PDOJGJII_01050 7.7e-53 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDOJGJII_01051 2.5e-71 yqeG S HAD phosphatase, family IIIA
PDOJGJII_01052 7.9e-181 yqeH S Ribosome biogenesis GTPase YqeH
PDOJGJII_01053 1e-29 yhbY J RNA-binding protein
PDOJGJII_01054 2.7e-77 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDOJGJII_01055 2.7e-71 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PDOJGJII_01056 1.5e-48 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDOJGJII_01057 5.5e-82 H Nodulation protein S (NodS)
PDOJGJII_01058 1.3e-122 ylbM S Belongs to the UPF0348 family
PDOJGJII_01059 2e-57 yceD S Uncharacterized ACR, COG1399
PDOJGJII_01060 1.9e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PDOJGJII_01061 1.2e-88 plsC 2.3.1.51 I Acyltransferase
PDOJGJII_01062 8.5e-94 yabB 2.1.1.223 L Methyltransferase small domain
PDOJGJII_01063 1.5e-27 yazA L GIY-YIG catalytic domain protein
PDOJGJII_01064 1.9e-128 rpsB J Belongs to the universal ribosomal protein uS2 family
PDOJGJII_01065 2.7e-128 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDOJGJII_01066 6.9e-37
PDOJGJII_01067 3.4e-92 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDOJGJII_01068 1.8e-57 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDOJGJII_01069 2.7e-157 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDOJGJII_01070 1.2e-225 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDOJGJII_01071 9.5e-106 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDOJGJII_01073 3.1e-111 K response regulator
PDOJGJII_01074 5e-167 arlS 2.7.13.3 T Histidine kinase
PDOJGJII_01075 1.6e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDOJGJII_01076 9.7e-24 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PDOJGJII_01077 1.6e-136 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PDOJGJII_01078 7.3e-105
PDOJGJII_01079 7.2e-117
PDOJGJII_01080 1.3e-41 dut S dUTPase
PDOJGJII_01081 2.1e-94 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDOJGJII_01082 3.7e-46 yqhY S Asp23 family, cell envelope-related function
PDOJGJII_01083 4.2e-36 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDOJGJII_01084 3e-103 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDOJGJII_01085 3.4e-146 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDOJGJII_01086 4.7e-16 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDOJGJII_01087 1.4e-82 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDOJGJII_01088 1.2e-120 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDOJGJII_01089 6.6e-49 argR K Regulates arginine biosynthesis genes
PDOJGJII_01090 2.7e-177 recN L May be involved in recombinational repair of damaged DNA
PDOJGJII_01091 7.2e-83 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDOJGJII_01092 7.6e-31 ynzC S UPF0291 protein
PDOJGJII_01093 5.9e-27 yneF S UPF0154 protein
PDOJGJII_01094 1.8e-91 engB D Necessary for normal cell division and for the maintenance of normal septation
PDOJGJII_01095 5.4e-44 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PDOJGJII_01096 1.2e-74 yciQ P membrane protein (DUF2207)
PDOJGJII_01097 3e-19 D nuclear chromosome segregation
PDOJGJII_01098 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDOJGJII_01099 1.6e-38 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDOJGJII_01100 7.4e-70 gluP 3.4.21.105 S Peptidase, S54 family
PDOJGJII_01101 1.5e-25 yqgQ S Bacterial protein of unknown function (DUF910)
PDOJGJII_01102 4.7e-158 glk 2.7.1.2 G Glucokinase
PDOJGJII_01103 8e-46 yqhL P Rhodanese-like protein
PDOJGJII_01104 9.7e-17 WQ51_02665 S Protein of unknown function (DUF3042)
PDOJGJII_01105 1.9e-111 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDOJGJII_01106 1.8e-205 ynbB 4.4.1.1 P aluminum resistance
PDOJGJII_01107 1.3e-45 glnR K Transcriptional regulator
PDOJGJII_01108 2e-247 glnA 6.3.1.2 E glutamine synthetase
PDOJGJII_01110 5.8e-37 ogt 2.1.1.63 H Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PDOJGJII_01111 2.7e-48 S Domain of unknown function (DUF956)
PDOJGJII_01112 6.3e-115 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDOJGJII_01113 7.2e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDOJGJII_01114 3.8e-105 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDOJGJII_01115 5.1e-102 cdsA 2.7.7.41 S Belongs to the CDS family
PDOJGJII_01116 4.1e-157 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PDOJGJII_01117 5.9e-260 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDOJGJII_01118 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDOJGJII_01119 8e-66 rimP J Required for maturation of 30S ribosomal subunits
PDOJGJII_01120 4.8e-170 nusA K Participates in both transcription termination and antitermination
PDOJGJII_01121 1.4e-39 ylxR K Protein of unknown function (DUF448)
PDOJGJII_01122 6.8e-26 ylxQ J ribosomal protein
PDOJGJII_01123 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDOJGJII_01124 1.3e-55 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDOJGJII_01125 1.4e-119 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDOJGJII_01126 2.5e-95 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDOJGJII_01127 1.4e-131 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDOJGJII_01128 4.2e-56 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDOJGJII_01129 1.5e-274 dnaK O Heat shock 70 kDa protein
PDOJGJII_01130 1.2e-160 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDOJGJII_01131 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDOJGJII_01133 9.2e-206 glnP P ABC transporter
PDOJGJII_01134 2.6e-119 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDOJGJII_01135 1.5e-31
PDOJGJII_01136 2e-111 ampC V Beta-lactamase
PDOJGJII_01137 3.5e-110 cobQ S glutamine amidotransferase
PDOJGJII_01138 4.7e-220 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PDOJGJII_01139 6.8e-86 tdk 2.7.1.21 F thymidine kinase
PDOJGJII_01140 1e-177 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDOJGJII_01141 1.4e-89 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDOJGJII_01142 7.7e-135 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDOJGJII_01143 5e-100 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDOJGJII_01144 4.5e-97 atpB C it plays a direct role in the translocation of protons across the membrane
PDOJGJII_01145 1.8e-15 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDOJGJII_01146 2.4e-39 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDOJGJII_01147 2.7e-57 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDOJGJII_01148 6.3e-266 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDOJGJII_01149 1.3e-141 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDOJGJII_01150 1.7e-236 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDOJGJII_01151 3.9e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDOJGJII_01152 4.1e-15 ywzB S Protein of unknown function (DUF1146)
PDOJGJII_01153 9.3e-197 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDOJGJII_01154 3.5e-91 sip L Belongs to the 'phage' integrase family
PDOJGJII_01155 3e-15 S Hypothetical protein (DUF2513)
PDOJGJII_01157 2.3e-17 E Zn peptidase
PDOJGJII_01158 4.8e-28 S sequence-specific DNA binding
PDOJGJII_01161 1.8e-17
PDOJGJII_01166 2.3e-24 S Bacteriophage Mu Gam like protein
PDOJGJII_01168 1.5e-73 S AAA domain
PDOJGJII_01169 9.4e-35 S Protein of unknown function (DUF669)
PDOJGJII_01170 8.5e-93 S Putative HNHc nuclease
PDOJGJII_01171 6.6e-34 L Helix-turn-helix domain
PDOJGJII_01172 5.7e-124 dnaB 3.6.4.12 L DnaB-like helicase C terminal domain
PDOJGJII_01173 3.1e-18
PDOJGJII_01174 1e-40 S Protein of unknown function (DUF1064)
PDOJGJII_01176 3.1e-41 S Protein of unknown function (DUF1064)
PDOJGJII_01179 8.2e-09
PDOJGJII_01180 2.1e-17 S HNH endonuclease
PDOJGJII_01181 8.5e-59 L Belongs to the 'phage' integrase family
PDOJGJII_01183 6e-72 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
PDOJGJII_01188 6.4e-33 arpU S Phage transcriptional regulator, ArpU family
PDOJGJII_01189 6.1e-55 V Abi-like protein
PDOJGJII_01191 1.5e-22
PDOJGJII_01192 3.7e-134 ps334 S Terminase-like family
PDOJGJII_01193 7.8e-164 S Phage portal protein, SPP1 Gp6-like
PDOJGJII_01194 6.1e-62 S Phage Mu protein F like protein
PDOJGJII_01195 7.7e-10 S Domain of unknown function (DUF4355)
PDOJGJII_01196 1e-105 gpG
PDOJGJII_01197 1.6e-34 S Phage gp6-like head-tail connector protein
PDOJGJII_01198 4.4e-12
PDOJGJII_01199 9.2e-33
PDOJGJII_01200 1.3e-19
PDOJGJII_01201 6.8e-47
PDOJGJII_01202 1.4e-14 S Phage tail assembly chaperone protein, TAC
PDOJGJII_01204 4.6e-86 D NLP P60 protein
PDOJGJII_01205 8.6e-77 S Phage tail protein
PDOJGJII_01206 1.3e-78 M Prophage endopeptidase tail
PDOJGJII_01207 3e-97 M Prophage endopeptidase tail
PDOJGJII_01209 6.9e-30 S Calcineurin-like phosphoesterase
PDOJGJII_01210 1.9e-32 K LysR substrate binding domain
PDOJGJII_01211 9.6e-09
PDOJGJII_01212 2.3e-65 yxkH G Polysaccharide deacetylase
PDOJGJII_01213 6.9e-30 yqkB S Belongs to the HesB IscA family
PDOJGJII_01214 2.8e-63 S Phage derived protein Gp49-like (DUF891)
PDOJGJII_01215 3.3e-40 K Helix-turn-helix domain
PDOJGJII_01216 7.8e-79
PDOJGJII_01221 9.5e-10 hol S Bacteriophage holin
PDOJGJII_01222 3.7e-131 pnuC H Nicotinamide mononucleotide transporter
PDOJGJII_01223 4.3e-19 setB G Major facilitator Superfamily
PDOJGJII_01227 1.4e-78 S Fic/DOC family
PDOJGJII_01228 9.9e-40 relB L Addiction module antitoxin, RelB DinJ family
PDOJGJII_01229 1.2e-25
PDOJGJII_01230 1.2e-52 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PDOJGJII_01231 9.4e-101
PDOJGJII_01232 4.7e-131 L Belongs to the 'phage' integrase family
PDOJGJII_01233 1.3e-44 hsdS-1 3.1.21.3 V Type I restriction modification DNA specificity domain
PDOJGJII_01234 3.2e-124 H ThiF family
PDOJGJII_01237 3.6e-07
PDOJGJII_01238 2.3e-263 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PDOJGJII_01239 1.7e-54 rplI J Binds to the 23S rRNA
PDOJGJII_01240 1.3e-204 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDOJGJII_01241 5.3e-64 C FMN binding
PDOJGJII_01242 7.4e-231 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDOJGJII_01244 8.7e-157 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDOJGJII_01245 3.5e-59 ykhA 3.1.2.20 I Thioesterase superfamily
PDOJGJII_01246 5.6e-10 S CAAX protease self-immunity
PDOJGJII_01247 2.8e-81 S Belongs to the UPF0246 family
PDOJGJII_01248 1.6e-100 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PDOJGJII_01249 9.3e-129 yxjG 2.1.1.14 E Cobalamin-independent synthase, Catalytic domain
PDOJGJII_01250 3.7e-74 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PDOJGJII_01251 4.5e-196 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PDOJGJII_01252 3.8e-161 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PDOJGJII_01253 2.2e-56 3.1.3.48 K Transcriptional regulator
PDOJGJII_01254 1.2e-197 1.3.5.4 C FMN_bind
PDOJGJII_01255 2.9e-117 pepL 3.4.11.5 E Releases the N-terminal proline from various substrates
PDOJGJII_01256 1.6e-201 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PDOJGJII_01257 3.3e-92 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDOJGJII_01258 4.7e-76 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PDOJGJII_01259 5.3e-134 glpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PDOJGJII_01260 1.4e-148 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDOJGJII_01261 6.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDOJGJII_01262 1.9e-21 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDOJGJII_01263 1.3e-252 ctpA 3.6.3.54 P P-type ATPase
PDOJGJII_01264 6.5e-66 pgm3 G phosphoglycerate mutase family
PDOJGJII_01265 5.1e-57 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PDOJGJII_01266 1.1e-85 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDOJGJII_01267 1.2e-218 yifK E Amino acid permease
PDOJGJII_01268 1.1e-202 oppA E ABC transporter, substratebinding protein
PDOJGJII_01269 7.9e-142 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDOJGJII_01270 4.4e-170 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDOJGJII_01271 7.4e-181 oppD P Belongs to the ABC transporter superfamily
PDOJGJII_01272 3.7e-155 oppF P Belongs to the ABC transporter superfamily
PDOJGJII_01273 1.2e-15 psiE S Phosphate-starvation-inducible E
PDOJGJII_01274 2.2e-209 mmuP E amino acid
PDOJGJII_01275 7.6e-113 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PDOJGJII_01276 4.5e-39 K LytTr DNA-binding domain
PDOJGJII_01277 2.5e-16 S Protein of unknown function (DUF3021)
PDOJGJII_01278 1.2e-150 yfeX P Peroxidase
PDOJGJII_01279 1.4e-30 tetR K Transcriptional regulator C-terminal region
PDOJGJII_01280 3.1e-47 S Short repeat of unknown function (DUF308)
PDOJGJII_01281 6.2e-53 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDOJGJII_01282 8.1e-163 oxlT P Major Facilitator Superfamily
PDOJGJII_01283 5.5e-62 ybbL S ABC transporter
PDOJGJII_01284 4.7e-100 ybbM S Uncharacterised protein family (UPF0014)
PDOJGJII_01285 4.2e-43 ytcD K HxlR-like helix-turn-helix
PDOJGJII_01286 6.9e-121 ytbE S reductase
PDOJGJII_01287 7.5e-72 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDOJGJII_01289 6.4e-96 XK27_06785 V ABC transporter, ATP-binding protein
PDOJGJII_01290 2.5e-254 XK27_06780 V ABC transporter permease
PDOJGJII_01292 5.1e-42 wecD K Acetyltransferase GNAT Family
PDOJGJII_01293 3.9e-47 hmpT S ECF-type riboflavin transporter, S component
PDOJGJII_01294 2.1e-69 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PDOJGJII_01295 1.7e-09 yvaZ S Protein of unknown function (DUF1648)
PDOJGJII_01296 1.7e-111 dat 2.6.1.21 EH PFAM aminotransferase, class IV
PDOJGJII_01297 2.6e-285 pepO 3.4.24.71 O Peptidase family M13
PDOJGJII_01298 7.7e-44 thiT S Thiamine transporter protein (Thia_YuaJ)
PDOJGJII_01299 6.9e-54 K Transcriptional regulator C-terminal region
PDOJGJII_01302 1.1e-08
PDOJGJII_01304 1e-76 S DNA primase
PDOJGJII_01305 3.1e-43 L Bifunctional DNA primase/polymerase, N-terminal
PDOJGJII_01306 6.7e-15
PDOJGJII_01311 6.8e-39 K COG3617 Prophage antirepressor
PDOJGJII_01313 2.4e-08 S Helix-turn-helix domain
PDOJGJII_01314 1.4e-24 K Cro/C1-type HTH DNA-binding domain
PDOJGJII_01315 1.2e-123 sip L Belongs to the 'phage' integrase family
PDOJGJII_01316 1.6e-55 jag S R3H domain protein
PDOJGJII_01317 4.5e-56 ohrR K helix_turn_helix multiple antibiotic resistance protein
PDOJGJII_01318 2e-31 azlD S Branched-chain amino acid transport protein (AzlD)
PDOJGJII_01319 5.1e-77 azlC E branched-chain amino acid
PDOJGJII_01320 9.3e-59 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PDOJGJII_01321 7.2e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDOJGJII_01322 5.2e-293 lai 4.2.1.53 S Myosin-crossreactive antigen
PDOJGJII_01323 3.5e-33 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PDOJGJII_01324 8.2e-194 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PDOJGJII_01325 4.1e-75 XK27_02070 S Nitroreductase family
PDOJGJII_01326 3.7e-111 endA F DNA RNA non-specific endonuclease
PDOJGJII_01328 3.2e-208 brnQ U Component of the transport system for branched-chain amino acids
PDOJGJII_01329 6.5e-61 K Bacterial regulatory proteins, tetR family
PDOJGJII_01330 9.3e-114 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDOJGJII_01331 2e-151 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDOJGJII_01332 9.5e-69 dhaL 2.7.1.121 S Dak2
PDOJGJII_01333 4e-49 dhaM 2.7.1.121 S PTS system fructose IIA component
PDOJGJII_01334 8.4e-104 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDOJGJII_01335 3e-164 yjcE P Sodium proton antiporter
PDOJGJII_01336 2e-209 mtlR K Mga helix-turn-helix domain
PDOJGJII_01337 1.5e-301 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDOJGJII_01338 4.7e-188 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDOJGJII_01339 3.2e-29 ponA V the current gene model (or a revised gene model) may contain a frame shift
PDOJGJII_01340 4.5e-102 tcyB E ABC transporter
PDOJGJII_01341 4.1e-101 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDOJGJII_01342 5.7e-96 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PDOJGJII_01343 1.6e-38 K Transcriptional regulator
PDOJGJII_01344 2.2e-107 terC P Integral membrane protein TerC family
PDOJGJII_01345 4.2e-261 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PDOJGJII_01346 2.8e-65 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDOJGJII_01347 6.4e-186 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PDOJGJII_01348 1.1e-41 gntR1 K Transcriptional regulator, GntR family
PDOJGJII_01349 8e-96 V ABC transporter, ATP-binding protein
PDOJGJII_01350 3e-09
PDOJGJII_01351 1.1e-39 ybjQ S Belongs to the UPF0145 family
PDOJGJII_01352 4.7e-158 manA 5.3.1.8 G mannose-6-phosphate isomerase
PDOJGJII_01353 6.6e-97 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDOJGJII_01354 4e-157 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDOJGJII_01355 1.8e-141 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDOJGJII_01356 3.7e-34
PDOJGJII_01357 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PDOJGJII_01358 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PDOJGJII_01359 2.3e-63 srtA 3.4.22.70 M sortase family
PDOJGJII_01361 1.8e-72 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PDOJGJII_01362 7.9e-62 yvdD 3.2.2.10 S Possible lysine decarboxylase
PDOJGJII_01363 1.2e-209 pacL 3.6.3.8 P P-type ATPase
PDOJGJII_01364 3.6e-100 pacL 3.6.3.8 P P-type ATPase
PDOJGJII_01365 1.3e-107 3.1.4.46 C phosphodiesterase
PDOJGJII_01366 4.1e-127 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDOJGJII_01367 1.1e-101 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PDOJGJII_01368 3.7e-82 noc K Belongs to the ParB family
PDOJGJII_01369 6.5e-118 soj D Sporulation initiation inhibitor
PDOJGJII_01370 1.4e-108 spo0J K Belongs to the ParB family
PDOJGJII_01371 1.8e-24 yyzM S Bacterial protein of unknown function (DUF951)
PDOJGJII_01372 2.4e-190 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDOJGJII_01373 5.5e-53 XK27_01040 S Protein of unknown function (DUF1129)
PDOJGJII_01374 1.8e-94 S Bacterial membrane protein, YfhO
PDOJGJII_01375 5e-51 I Alpha/beta hydrolase family
PDOJGJII_01376 1.3e-40
PDOJGJII_01377 6.7e-103 psaA P Belongs to the bacterial solute-binding protein 9 family
PDOJGJII_01378 1e-98 fhuC P ABC transporter
PDOJGJII_01379 2.8e-95 znuB U ABC 3 transport family
PDOJGJII_01380 8.6e-56 S ECF transporter, substrate-specific component
PDOJGJII_01381 1.7e-100 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDOJGJII_01382 9.8e-90 S NADPH-dependent FMN reductase
PDOJGJII_01383 1.2e-27 yraB K transcriptional regulator
PDOJGJII_01384 2.2e-66 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDOJGJII_01386 3.4e-154 EGP Major facilitator Superfamily
PDOJGJII_01387 3.3e-57 S Haloacid dehalogenase-like hydrolase
PDOJGJII_01388 2.9e-87 yvyE 3.4.13.9 S YigZ family
PDOJGJII_01389 7.3e-38 S CAAX protease self-immunity
PDOJGJII_01390 2.2e-116 cps1D M Domain of unknown function (DUF4422)
PDOJGJII_01391 1.7e-62 S Glycosyltransferase like family 2
PDOJGJII_01392 1.9e-142 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDOJGJII_01393 4.2e-101 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDOJGJII_01394 5.6e-181 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDOJGJII_01395 2.1e-130 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDOJGJII_01396 1.6e-117 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
PDOJGJII_01397 9.8e-27 S zinc-ribbon domain
PDOJGJII_01398 4.9e-79 S response to antibiotic
PDOJGJII_01399 4.8e-144 L AAA ATPase domain
PDOJGJII_01400 5.9e-114 3.6.4.12 L UvrD/REP helicase N-terminal domain
PDOJGJII_01401 1e-91 M Glycosyl transferase family 8
PDOJGJII_01402 5.9e-37 M group 2 family protein
PDOJGJII_01403 1.9e-90
PDOJGJII_01404 3.3e-22 H COG0463 Glycosyltransferases involved in cell wall biogenesis
PDOJGJII_01406 2.6e-67 S Polysaccharide pyruvyl transferase
PDOJGJII_01407 4.2e-115 cps2J S Polysaccharide biosynthesis protein
PDOJGJII_01409 3e-73 epsB M biosynthesis protein
PDOJGJII_01410 1.2e-81 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PDOJGJII_01411 8.6e-110 ywqE 3.1.3.48 GM PHP domain protein
PDOJGJII_01412 3.7e-126 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDOJGJII_01413 8.5e-90 rfbP M Bacterial sugar transferase
PDOJGJII_01414 1.4e-116 M Core-2/I-Branching enzyme
PDOJGJII_01415 1.1e-193 glf 5.4.99.9 M UDP-galactopyranose mutase
PDOJGJII_01416 8.5e-188 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PDOJGJII_01417 2e-137 L Belongs to the 'phage' integrase family
PDOJGJII_01418 8.2e-72 H ThiF family
PDOJGJII_01419 1.4e-74 G Peptidase_C39 like family
PDOJGJII_01420 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDOJGJII_01421 2.8e-160 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDOJGJII_01422 1.8e-95 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDOJGJII_01423 1.9e-67 XK27_09620 S NADPH-dependent FMN reductase
PDOJGJII_01424 1.1e-157 XK27_09615 S reductase
PDOJGJII_01425 4.4e-39 2.7.7.65 T phosphorelay sensor kinase activity
PDOJGJII_01426 1.1e-146 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PDOJGJII_01427 4.1e-54 cps3I G Acyltransferase family
PDOJGJII_01428 3.6e-14
PDOJGJII_01429 6.5e-130 S Bacterial membrane protein YfhO
PDOJGJII_01430 4.8e-161 XK27_08315 M Sulfatase
PDOJGJII_01431 5.3e-70 M Domain of unknown function (DUF4422)
PDOJGJII_01432 1.4e-58 cps3F
PDOJGJII_01433 1.3e-87 waaB GT4 M Glycosyl transferases group 1
PDOJGJII_01434 6.3e-62 S Psort location CytoplasmicMembrane, score
PDOJGJII_01435 9.7e-75 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDOJGJII_01436 4.1e-177 thrC 4.2.3.1 E Threonine synthase
PDOJGJII_01437 4.5e-127 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDOJGJII_01438 8.8e-168 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PDOJGJII_01439 5.6e-89 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDOJGJII_01440 2e-47 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PDOJGJII_01441 1.6e-07 XK27_08315 M Sulfatase
PDOJGJII_01442 1.4e-179 XK27_08315 M Sulfatase
PDOJGJII_01444 1.9e-167 mdtG EGP Major facilitator Superfamily
PDOJGJII_01445 8.8e-253 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PDOJGJII_01446 5.7e-84 treR K UTRA
PDOJGJII_01447 3.3e-259 treB G phosphotransferase system
PDOJGJII_01448 3.5e-63 3.1.3.73 G phosphoglycerate mutase
PDOJGJII_01449 2.4e-82 pncA Q isochorismatase
PDOJGJII_01450 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDOJGJII_01451 6.2e-102 ydhQ K UbiC transcription regulator-associated domain protein
PDOJGJII_01452 1.7e-171 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDOJGJII_01453 1.3e-41 K Transcriptional regulator, HxlR family
PDOJGJII_01454 2.4e-163 C Luciferase-like monooxygenase
PDOJGJII_01455 2.2e-184 L Probable transposase
PDOJGJII_01456 1.8e-67 1.5.1.38 S NADPH-dependent FMN reductase
PDOJGJII_01457 1.5e-117 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDOJGJII_01458 1.1e-75 L haloacid dehalogenase-like hydrolase
PDOJGJII_01459 5.2e-61 EG EamA-like transporter family
PDOJGJII_01460 2.4e-118 K AI-2E family transporter
PDOJGJII_01461 8.4e-173 malY 4.4.1.8 E Aminotransferase, class I
PDOJGJII_01462 6e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDOJGJII_01464 1.9e-09
PDOJGJII_01465 2.4e-98 V domain protein
PDOJGJII_01466 1.3e-119 xth 3.1.11.2 L exodeoxyribonuclease III
PDOJGJII_01467 1.3e-16
PDOJGJII_01468 1.1e-104 azlC E AzlC protein
PDOJGJII_01469 1.3e-38 azlD S branched-chain amino acid
PDOJGJII_01470 1.8e-65 I alpha/beta hydrolase fold
PDOJGJII_01471 1.2e-24
PDOJGJII_01472 1.2e-58 3.6.1.27 I phosphatase
PDOJGJII_01473 5.4e-23
PDOJGJII_01474 3.8e-93 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PDOJGJII_01475 8.3e-90 sirR K Helix-turn-helix diphteria tox regulatory element
PDOJGJII_01476 3.1e-27 cspC K Cold shock protein
PDOJGJII_01477 4.3e-82 thrE S Putative threonine/serine exporter
PDOJGJII_01478 2.8e-49 S Threonine/Serine exporter, ThrE
PDOJGJII_01479 2.8e-125 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDOJGJII_01480 1.4e-86 S Sucrose-6F-phosphate phosphohydrolase
PDOJGJII_01481 3.2e-34 trxA O Belongs to the thioredoxin family
PDOJGJII_01482 9.4e-22 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDOJGJII_01483 8.8e-22 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDOJGJII_01484 1.1e-65 degV S Uncharacterised protein, DegV family COG1307
PDOJGJII_01486 8.1e-53 queT S QueT transporter
PDOJGJII_01487 3.9e-34 XK27_01315 S Protein of unknown function (DUF2829)
PDOJGJII_01488 8.4e-102 IQ Enoyl-(Acyl carrier protein) reductase
PDOJGJII_01489 1e-111 argE 3.5.1.18 E Peptidase dimerisation domain
PDOJGJII_01490 1.9e-174 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDOJGJII_01491 7.1e-95 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDOJGJII_01492 2.1e-85 S Alpha beta hydrolase
PDOJGJII_01493 3.5e-43 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDOJGJII_01494 6.2e-140 V MatE
PDOJGJII_01495 1.4e-156 gmuE 2.7.1.2, 2.7.1.4 GK ROK family
PDOJGJII_01496 2.6e-64 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDOJGJII_01497 7.4e-97 V ABC transporter
PDOJGJII_01498 3.7e-131 bacI V MacB-like periplasmic core domain
PDOJGJII_01499 5.3e-74 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDOJGJII_01500 1.7e-26
PDOJGJII_01501 2.1e-180 yhdP S Transporter associated domain
PDOJGJII_01502 6e-79 ptp2 3.1.3.48 T Tyrosine phosphatase family
PDOJGJII_01503 0.0 L Helicase C-terminal domain protein
PDOJGJII_01504 9.6e-251 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDOJGJII_01505 2.2e-212 yfnA E Amino Acid
PDOJGJII_01506 3.2e-53 zur P Belongs to the Fur family
PDOJGJII_01508 2.2e-98
PDOJGJII_01509 3.9e-08
PDOJGJII_01510 1.3e-102 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDOJGJII_01511 6.6e-100 glnH ET ABC transporter
PDOJGJII_01512 1.2e-85 gluC P ABC transporter permease
PDOJGJII_01513 9.6e-78 glnP P ABC transporter permease
PDOJGJII_01514 2.9e-182 steT E amino acid
PDOJGJII_01515 6.5e-21 K Acetyltransferase (GNAT) domain
PDOJGJII_01516 1.1e-146 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PDOJGJII_01517 5.9e-54 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PDOJGJII_01518 2.5e-78 K rpiR family
PDOJGJII_01519 5.6e-167 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDOJGJII_01520 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PDOJGJII_01521 4.5e-109 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDOJGJII_01522 1e-100 rplD J Forms part of the polypeptide exit tunnel
PDOJGJII_01523 2.9e-39 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDOJGJII_01524 1.4e-142 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDOJGJII_01525 1e-44 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDOJGJII_01526 1.5e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDOJGJII_01527 5.2e-116 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDOJGJII_01528 6.2e-73 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDOJGJII_01529 9e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PDOJGJII_01530 8e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDOJGJII_01531 5.1e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDOJGJII_01532 7e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDOJGJII_01533 1.3e-91 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDOJGJII_01534 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDOJGJII_01535 2.5e-65 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDOJGJII_01536 3.2e-87 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDOJGJII_01537 9.6e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDOJGJII_01538 8.4e-82 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDOJGJII_01539 2.1e-22 rpmD J Ribosomal protein L30
PDOJGJII_01540 1e-67 rplO J Binds to the 23S rRNA
PDOJGJII_01541 4.4e-207 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDOJGJII_01542 4.4e-107 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDOJGJII_01543 4.8e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDOJGJII_01544 2.5e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PDOJGJII_01545 4.4e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDOJGJII_01546 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDOJGJII_01547 1.3e-155 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDOJGJII_01548 4.8e-53 rplQ J Ribosomal protein L17
PDOJGJII_01549 1.8e-100 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDOJGJII_01550 6.7e-111 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDOJGJII_01551 2.8e-108 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDOJGJII_01552 2.5e-125 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDOJGJII_01553 5.5e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDOJGJII_01554 1.1e-60 rpsI J Belongs to the universal ribosomal protein uS9 family
PDOJGJII_01555 3.4e-23
PDOJGJII_01556 8.9e-246 yjbQ P TrkA C-terminal domain protein
PDOJGJII_01557 0.0 helD 3.6.4.12 L DNA helicase
PDOJGJII_01558 3e-67 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PDOJGJII_01559 1.5e-86 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PDOJGJII_01560 5.9e-101 hrtB V ABC transporter permease
PDOJGJII_01561 2e-35 ygfC K Bacterial regulatory proteins, tetR family
PDOJGJII_01562 7e-85 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PDOJGJII_01563 1.1e-277 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDOJGJII_01564 2.1e-36 M LysM domain protein
PDOJGJII_01566 1.1e-113 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDOJGJII_01567 6.7e-97 sbcC L Putative exonuclease SbcCD, C subunit
PDOJGJII_01568 7.6e-58 S LexA-binding, inner membrane-associated putative hydrolase
PDOJGJII_01569 7.2e-53 perR P Belongs to the Fur family
PDOJGJII_01570 3.2e-207 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDOJGJII_01571 4e-141 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDOJGJII_01572 2.5e-86 S (CBS) domain
PDOJGJII_01573 6.2e-158 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDOJGJII_01574 6.5e-75 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDOJGJII_01575 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDOJGJII_01576 7.3e-140 yabM S Polysaccharide biosynthesis protein
PDOJGJII_01577 3.6e-31 yabO J S4 domain protein
PDOJGJII_01578 1.3e-21 divIC D Septum formation initiator
PDOJGJII_01579 1.1e-40 yabR J RNA binding
PDOJGJII_01580 5.5e-96 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDOJGJII_01581 1.5e-76 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDOJGJII_01582 1.3e-282 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDOJGJII_01583 2.4e-132 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDOJGJII_01584 1.6e-169 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDOJGJII_01585 5.1e-260 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDOJGJII_01586 5.5e-117 ldhA 1.1.1.28 CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PDOJGJII_01587 5.6e-136 pfoS S Phosphotransferase system, EIIC
PDOJGJII_01588 2.5e-255 V Type II restriction enzyme, methylase subunits
PDOJGJII_01589 1.7e-224 E ABC transporter, substratebinding protein
PDOJGJII_01590 1.1e-115 sufC O FeS assembly ATPase SufC
PDOJGJII_01591 4.6e-145 sufD O FeS assembly protein SufD
PDOJGJII_01592 3.7e-147 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDOJGJII_01593 4.9e-41 nifU C SUF system FeS assembly protein, NifU family
PDOJGJII_01594 4.2e-240 sufB O assembly protein SufB
PDOJGJII_01595 5.5e-45 S VIT family
PDOJGJII_01596 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PDOJGJII_01597 1.5e-136 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDOJGJII_01598 3.6e-112 rssA S Phospholipase, patatin family
PDOJGJII_01599 3.7e-16
PDOJGJII_01600 2.7e-30
PDOJGJII_01601 1.9e-78 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PDOJGJII_01602 1.2e-99 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDOJGJII_01603 3.4e-78 yvfR V ABC transporter
PDOJGJII_01604 3.2e-53 yvfS V ABC-2 type transporter
PDOJGJII_01605 8.4e-58 salK 2.7.13.3 T Histidine kinase
PDOJGJII_01606 2.4e-75 desR K helix_turn_helix, Lux Regulon
PDOJGJII_01607 8.7e-39 ptp3 3.1.3.48 T Tyrosine phosphatase family
PDOJGJII_01608 8.2e-13 ptp3 3.1.3.48 T Tyrosine phosphatase family
PDOJGJII_01609 3.7e-81 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PDOJGJII_01610 1.1e-20 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PDOJGJII_01614 4.2e-142 xerS L Phage integrase family
PDOJGJII_01615 1e-70 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PDOJGJII_01616 6.5e-138 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDOJGJII_01617 4e-216 1.3.5.4 C FAD binding domain
PDOJGJII_01618 4.6e-117 IQ Enoyl-(Acyl carrier protein) reductase
PDOJGJII_01619 4.7e-138 G Xylose isomerase-like TIM barrel
PDOJGJII_01620 7.5e-73 K Transcriptional regulator, LysR family
PDOJGJII_01621 1.4e-98 EGP Major Facilitator Superfamily
PDOJGJII_01622 7.5e-129 EGP Major Facilitator Superfamily
PDOJGJII_01623 2.4e-35 L Integrase core domain
PDOJGJII_01624 1.4e-41 L Integrase core domain
PDOJGJII_01625 1.3e-20 L PFAM transposase IS3 IS911 family protein
PDOJGJII_01626 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PDOJGJII_01627 1.7e-32 P Heavy-metal-associated domain
PDOJGJII_01628 8.7e-31 tnp L Transposase IS66 family
PDOJGJII_01629 5e-18 tnp
PDOJGJII_01630 9.6e-44 L hmm pf00665
PDOJGJII_01631 5.6e-124 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PDOJGJII_01632 4.6e-84 dps P Ferritin-like domain
PDOJGJII_01633 1.1e-157 L transposase, IS605 OrfB family
PDOJGJII_01634 2.5e-58 tlpA2 L Transposase IS200 like
PDOJGJII_01635 4.1e-53 1.14.12.17 C Oxidoreductase NAD-binding domain
PDOJGJII_01636 0.0 O Belongs to the peptidase S8 family
PDOJGJII_01637 1e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDOJGJII_01640 1.7e-46 yjaB_1 K Acetyltransferase (GNAT) domain
PDOJGJII_01641 3.1e-81 yitS S EDD domain protein, DegV family
PDOJGJII_01642 1.9e-57 racA K Domain of unknown function (DUF1836)
PDOJGJII_01643 7.2e-117 queH 1.17.99.6, 3.1.26.4 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PDOJGJII_01644 2.3e-69 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PDOJGJII_01645 4.8e-71 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PDOJGJII_01646 1.6e-127 potE2 E amino acid
PDOJGJII_01647 2.6e-22 potE2 E amino acid
PDOJGJII_01650 6.9e-49 L HNH endonuclease
PDOJGJII_01651 4.9e-24
PDOJGJII_01652 4.6e-16
PDOJGJII_01653 4e-260 res_1 3.1.21.5 L Type III restriction enzyme, res subunit
PDOJGJII_01654 3.1e-116 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
PDOJGJII_01655 8.5e-56 sthIM 2.1.1.72 L DNA methylase
PDOJGJII_01656 2.3e-193 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
PDOJGJII_01657 4.5e-57 sthIM 2.1.1.72 L DNA methylase
PDOJGJII_01659 8.6e-60 hsdM 2.1.1.72 V type I restriction-modification system
PDOJGJII_01660 5.7e-23 3.1.21.3 V Type I restriction modification DNA specificity domain
PDOJGJII_01661 1.5e-105 L Belongs to the 'phage' integrase family
PDOJGJII_01662 2.7e-14 L Plasmid pRiA4b ORF-3-like protein
PDOJGJII_01663 1.1e-189 XK27_11280 S Psort location CytoplasmicMembrane, score
PDOJGJII_01664 6.2e-29 S COG NOG19168 non supervised orthologous group
PDOJGJII_01666 2.3e-104 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
PDOJGJII_01668 1.2e-216 pts36C G PTS system sugar-specific permease component
PDOJGJII_01669 3.4e-41 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PDOJGJII_01670 1.1e-46 pts36A 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDOJGJII_01671 2.2e-70 K DeoR C terminal sensor domain
PDOJGJII_01672 1.7e-122 yvgN C Aldo keto reductase
PDOJGJII_01673 3.6e-125 yvgN C Aldo keto reductase
PDOJGJII_01679 1.3e-16 M domain protein
PDOJGJII_01681 1.6e-22 agrA KT Response regulator of the LytR AlgR family
PDOJGJII_01682 1.8e-43 2.7.13.3 T protein histidine kinase activity
PDOJGJII_01683 0.0 pepN 3.4.11.2 E aminopeptidase
PDOJGJII_01684 1.1e-35
PDOJGJII_01686 2.9e-124 D CobQ CobB MinD ParA nucleotide binding domain protein
PDOJGJII_01687 1.4e-12 bglG K antiterminator
PDOJGJII_01688 3.2e-84 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDOJGJII_01689 8.5e-141 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDOJGJII_01690 1.9e-37 S Replication initiator protein A (RepA) N-terminus
PDOJGJII_01691 9.4e-109 L Initiator Replication protein
PDOJGJII_01692 6.1e-08 yokH G regulation of fungal-type cell wall biogenesis
PDOJGJII_01694 6.5e-12 L PLD-like domain
PDOJGJII_01695 3.5e-23 L PLD-like domain
PDOJGJII_01696 1.6e-56 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
PDOJGJII_01697 8.5e-73 S Domain of unknown function (DUF3841)
PDOJGJII_01698 8e-71 yfjM S Protein of unknown function DUF262
PDOJGJII_01699 5.2e-143 yfjM S Protein of unknown function DUF262
PDOJGJII_01700 2.3e-173 spoVK O PFAM ATPase family associated with various cellular activities (AAA)
PDOJGJII_01702 4.9e-48 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PDOJGJII_01703 2.8e-66 S Acetyltransferase (GNAT) domain
PDOJGJII_01704 1.1e-71 ywlG S Belongs to the UPF0340 family
PDOJGJII_01705 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PDOJGJII_01706 3.6e-96 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDOJGJII_01707 2.6e-57 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDOJGJII_01708 2.4e-176 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PDOJGJII_01709 2e-14 ybaN S Protein of unknown function (DUF454)
PDOJGJII_01710 3.3e-237 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDOJGJII_01711 1.2e-199 frdC 1.3.5.4 C FAD binding domain
PDOJGJII_01712 6.9e-206 yflS P Sodium:sulfate symporter transmembrane region
PDOJGJII_01713 1.1e-34 yncA 2.3.1.79 S Maltose acetyltransferase
PDOJGJII_01714 3e-162 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDOJGJII_01715 8.4e-60 dedA 3.1.3.1 S SNARE associated Golgi protein
PDOJGJII_01716 5.3e-95 ypuA S Protein of unknown function (DUF1002)
PDOJGJII_01718 3.5e-230 3.2.1.18 GH33 M Rib/alpha-like repeat
PDOJGJII_01719 1.2e-44 K Copper transport repressor CopY TcrY
PDOJGJII_01720 6.1e-60 T Belongs to the universal stress protein A family
PDOJGJII_01721 3.4e-41 K Bacterial regulatory proteins, tetR family
PDOJGJII_01722 1.1e-56 K transcriptional
PDOJGJII_01723 6.2e-72 mleR K LysR family
PDOJGJII_01724 8.3e-248 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PDOJGJII_01725 3.3e-127 mleP S Sodium Bile acid symporter family
PDOJGJII_01726 9.4e-64 S ECF transporter, substrate-specific component
PDOJGJII_01727 4.1e-60 acmC 3.2.1.96 NU mannosyl-glycoprotein
PDOJGJII_01728 3.3e-74 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDOJGJII_01729 9.7e-194 pbuX F xanthine permease
PDOJGJII_01730 9.1e-34 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDOJGJII_01731 2.7e-259 topB 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PDOJGJII_01732 2.5e-94 yjbM 2.7.6.5 S RelA SpoT domain protein
PDOJGJII_01733 7.6e-117 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDOJGJII_01734 1.9e-94 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PDOJGJII_01735 5.5e-160 mgtE P Acts as a magnesium transporter
PDOJGJII_01737 1.7e-40
PDOJGJII_01738 1.3e-34 K GNAT family
PDOJGJII_01739 2.9e-209 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PDOJGJII_01740 5.5e-221 gdhA 1.4.1.4 E Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PDOJGJII_01741 1.1e-41 O ADP-ribosylglycohydrolase
PDOJGJII_01742 8.5e-222 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PDOJGJII_01743 3.6e-266 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDOJGJII_01744 7.1e-161 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDOJGJII_01745 1.4e-119 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PDOJGJII_01746 4.7e-194 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PDOJGJII_01747 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDOJGJII_01748 1.2e-175 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PDOJGJII_01749 2e-24 S Domain of unknown function (DUF4828)
PDOJGJII_01750 1.6e-127 mocA S Oxidoreductase
PDOJGJII_01751 5.2e-160 yfmL L DEAD DEAH box helicase
PDOJGJII_01752 2e-20 S Domain of unknown function (DUF3284)
PDOJGJII_01754 2.3e-279 kup P Transport of potassium into the cell
PDOJGJII_01755 9.4e-101 malR K Transcriptional regulator, LacI family
PDOJGJII_01756 4.3e-213 malT G Transporter, major facilitator family protein
PDOJGJII_01757 2.9e-78 galM 5.1.3.3 G Aldose 1-epimerase
PDOJGJII_01758 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PDOJGJII_01759 4.9e-85 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PDOJGJII_01760 3e-266 E Amino acid permease
PDOJGJII_01761 6e-182 pepS E Thermophilic metalloprotease (M29)
PDOJGJII_01762 1.6e-168 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDOJGJII_01763 2.4e-70 K Sugar-specific transcriptional regulator TrmB
PDOJGJII_01764 1.7e-122 S Sulfite exporter TauE/SafE
PDOJGJII_01765 5.2e-120 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
PDOJGJII_01766 0.0 S Bacterial membrane protein YfhO
PDOJGJII_01767 8.7e-53 gtcA S Teichoic acid glycosylation protein
PDOJGJII_01768 5.1e-54 fld C Flavodoxin
PDOJGJII_01769 1.2e-143 map 3.4.11.18 E Methionine Aminopeptidase
PDOJGJII_01770 1.2e-152 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PDOJGJII_01771 6.2e-12 mltD CBM50 M Lysin motif
PDOJGJII_01772 3.8e-93 yihY S Belongs to the UPF0761 family
PDOJGJII_01773 2.1e-190 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDOJGJII_01774 2.7e-242 lysP E amino acid
PDOJGJII_01775 2.3e-69 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PDOJGJII_01776 8.6e-272 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PDOJGJII_01777 9.2e-14 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDOJGJII_01778 3.2e-57 lssY 3.6.1.27 I phosphatidate phosphatase activity
PDOJGJII_01779 7.6e-83 lysR5 K LysR substrate binding domain
PDOJGJII_01780 2.2e-119 yxaA S membrane transporter protein
PDOJGJII_01781 2.6e-32 ywjH S Protein of unknown function (DUF1634)
PDOJGJII_01782 7e-126 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDOJGJII_01783 6e-226 pipD E Dipeptidase
PDOJGJII_01784 1.1e-21 K helix_turn_helix multiple antibiotic resistance protein
PDOJGJII_01785 4.4e-165 EGP Major facilitator Superfamily
PDOJGJII_01786 5.6e-82 S L,D-transpeptidase catalytic domain
PDOJGJII_01787 5.6e-139 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PDOJGJII_01788 1.5e-144 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PDOJGJII_01789 1.9e-27 ydiI Q Thioesterase superfamily
PDOJGJII_01790 5.6e-57 yfeJ 6.3.5.2 F glutamine amidotransferase
PDOJGJII_01791 1.9e-148 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PDOJGJII_01792 6.4e-114 degV S EDD domain protein, DegV family
PDOJGJII_01793 5e-225 cadA P P-type ATPase
PDOJGJII_01794 1.8e-254 E Amino acid permease
PDOJGJII_01795 2.7e-83 S Membrane
PDOJGJII_01796 1.2e-49 cps3F
PDOJGJII_01797 5.1e-268 fruA 2.7.1.202 GT Phosphotransferase System
PDOJGJII_01798 4.1e-151 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PDOJGJII_01799 4.5e-87 fruR K DeoR C terminal sensor domain
PDOJGJII_01800 2.1e-220 XK27_08635 S UPF0210 protein
PDOJGJII_01801 4.1e-27 gcvR T Belongs to the UPF0237 family
PDOJGJII_01802 6.1e-39
PDOJGJII_01803 2.2e-77 E GDSL-like Lipase/Acylhydrolase family
PDOJGJII_01804 9.2e-56 S Protein of unknown function (DUF975)
PDOJGJII_01805 7.3e-149 lplA 6.3.1.20 H Lipoate-protein ligase
PDOJGJII_01806 4e-230 lpdA 1.8.1.4 C Dehydrogenase
PDOJGJII_01807 8.9e-181 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDOJGJII_01808 2.8e-166 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PDOJGJII_01809 4.7e-178 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PDOJGJII_01812 6.5e-59 S Protein of unknown function (DUF4256)
PDOJGJII_01813 1.5e-128 metQ M Belongs to the nlpA lipoprotein family
PDOJGJII_01814 2.4e-31 metI U ABC transporter permease
PDOJGJII_01815 6.2e-151 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDOJGJII_01817 1.7e-264 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PDOJGJII_01818 3.6e-172 npr 1.11.1.1 S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDOJGJII_01819 1.7e-106 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
PDOJGJII_01820 1.1e-83 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PDOJGJII_01821 3e-84 drgA C nitroreductase
PDOJGJII_01822 8.8e-135 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDOJGJII_01823 1.3e-69 metI P ABC transporter permease
PDOJGJII_01824 2e-149 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDOJGJII_01825 5.1e-108 metQ1 P Belongs to the nlpA lipoprotein family
PDOJGJII_01826 1.2e-144 2.1.1.14 E methionine synthase, vitamin-B12 independent
PDOJGJII_01827 1e-45 yphJ 4.1.1.44 S decarboxylase
PDOJGJII_01828 1.2e-57 yphH S Cupin domain
PDOJGJII_01829 2e-45 C Flavodoxin
PDOJGJII_01830 8.5e-58 S CAAX protease self-immunity
PDOJGJII_01831 1.2e-102 pgm3 G phosphoglycerate mutase
PDOJGJII_01832 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDOJGJII_01833 1.4e-224 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDOJGJII_01834 4.1e-54 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDOJGJII_01835 1.5e-67 M ErfK YbiS YcfS YnhG
PDOJGJII_01836 1.4e-107 XK27_08845 S ABC transporter, ATP-binding protein
PDOJGJII_01837 4.3e-113 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PDOJGJII_01838 7.8e-132 ABC-SBP S ABC transporter
PDOJGJII_01839 1.3e-159 potD P ABC transporter
PDOJGJII_01840 1.7e-103 potC U Binding-protein-dependent transport system inner membrane component
PDOJGJII_01841 1.5e-120 potB P ABC transporter permease
PDOJGJII_01842 8.2e-167 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDOJGJII_01843 7.4e-100 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDOJGJII_01844 5.7e-261 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PDOJGJII_01845 5.2e-236 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDOJGJII_01846 3e-13 S Enterocin A Immunity
PDOJGJII_01848 2.2e-16 pspC KT PspC domain
PDOJGJII_01849 3.1e-16 S Putative adhesin
PDOJGJII_01850 7.1e-19 XK27_06920 S Protein of unknown function (DUF1700)
PDOJGJII_01851 8.1e-38 K transcriptional regulator PadR family
PDOJGJII_01852 3.9e-272 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDOJGJII_01853 1.9e-112 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDOJGJII_01854 9.6e-132 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDOJGJII_01855 1.6e-26 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PDOJGJII_01856 3.2e-08 KT PspC domain protein
PDOJGJII_01857 3.5e-85 phoR 2.7.13.3 T Histidine kinase
PDOJGJII_01858 4.6e-86 K response regulator
PDOJGJII_01859 4.1e-68 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PDOJGJII_01860 1.2e-162 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDOJGJII_01861 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDOJGJII_01862 1.7e-96 yeaN P Major Facilitator Superfamily
PDOJGJII_01863 7.9e-81 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDOJGJII_01864 1e-45 comFC S Competence protein
PDOJGJII_01865 4.6e-127 comFA L Helicase C-terminal domain protein
PDOJGJII_01866 1.6e-157 tagO 2.7.8.33, 2.7.8.35 M transferase
PDOJGJII_01867 1.2e-295 ydaO E amino acid
PDOJGJII_01868 2.8e-268 aha1 P COG COG0474 Cation transport ATPase
PDOJGJII_01869 2.8e-272 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDOJGJII_01870 2.4e-33 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDOJGJII_01871 5.3e-33 S CAAX protease self-immunity
PDOJGJII_01872 1.3e-98 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDOJGJII_01873 1.9e-254 uup S ABC transporter, ATP-binding protein
PDOJGJII_01874 2.9e-161 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDOJGJII_01875 4.3e-28 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PDOJGJII_01876 2.8e-70 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PDOJGJII_01877 1.6e-140 ansA 3.5.1.1 EJ Asparaginase
PDOJGJII_01878 5.5e-82 fat 3.1.2.21 I Acyl-ACP thioesterase
PDOJGJII_01879 3.2e-92 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDOJGJII_01880 1.4e-40 yabA L Involved in initiation control of chromosome replication
PDOJGJII_01881 5.2e-83 holB 2.7.7.7 L DNA polymerase III
PDOJGJII_01882 1.8e-65 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDOJGJII_01883 9.2e-29 yaaL S Protein of unknown function (DUF2508)
PDOJGJII_01884 2.2e-97 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDOJGJII_01885 7e-34 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDOJGJII_01886 5.1e-211 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDOJGJII_01887 3.3e-62 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDOJGJII_01888 6.4e-76 rsmC 2.1.1.172 J Methyltransferase
PDOJGJII_01889 3.5e-27 nrdH O Glutaredoxin
PDOJGJII_01890 4.8e-45 nrdI F NrdI Flavodoxin like
PDOJGJII_01891 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDOJGJII_01892 1e-160 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDOJGJII_01893 2.1e-301 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDOJGJII_01894 1.4e-54
PDOJGJII_01895 2.6e-48 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDOJGJII_01896 7.6e-75 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDOJGJII_01897 1.6e-115 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDOJGJII_01898 5e-67 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDOJGJII_01899 7.7e-84 nusG K Participates in transcription elongation, termination and antitermination
PDOJGJII_01900 2.6e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDOJGJII_01901 2.1e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDOJGJII_01902 7e-71 yacP S YacP-like NYN domain
PDOJGJII_01903 1.6e-108 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDOJGJII_01904 6.4e-56 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDOJGJII_01905 1.2e-207 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDOJGJII_01906 2.9e-247 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDOJGJII_01907 8.2e-154 yacL S domain protein
PDOJGJII_01908 1e-222 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDOJGJII_01909 6.9e-74 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PDOJGJII_01910 4.3e-19 HA62_12640 S GCN5-related N-acetyl-transferase
PDOJGJII_01911 5.8e-223 pepC 3.4.22.40 E Peptidase C1-like family
PDOJGJII_01912 1.3e-33 S Enterocin A Immunity
PDOJGJII_01913 2.9e-85 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDOJGJII_01914 4.5e-129 mleP2 S Sodium Bile acid symporter family
PDOJGJII_01915 4.6e-116 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDOJGJII_01917 3e-43 ydcK S Belongs to the SprT family
PDOJGJII_01918 4.4e-252 yhgF K Tex-like protein N-terminal domain protein
PDOJGJII_01919 1e-129 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDOJGJII_01920 3.3e-243 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDOJGJII_01921 2.1e-89 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PDOJGJII_01922 4.9e-96 gntR1 K UbiC transcription regulator-associated domain protein
PDOJGJII_01923 1e-89 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDOJGJII_01925 1.1e-07
PDOJGJII_01926 1.6e-197 dtpT U amino acid peptide transporter

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)