| ORF_ID | e_value | Gene_name | EC_number | CAZy | COGs | Description |
|---|---|---|---|---|---|---|
| KNIFDBKJ_00002 | 1.6e-197 | dtpT | U | amino acid peptide transporter | ||
| KNIFDBKJ_00003 | 1.1e-07 | |||||
| KNIFDBKJ_00005 | 1e-89 | proC | 1.5.1.2 | E | Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline | |
| KNIFDBKJ_00006 | 4.9e-96 | gntR1 | K | UbiC transcription regulator-associated domain protein | ||
| KNIFDBKJ_00007 | 1.4e-90 | tagA | 2.4.1.187 | GT26 | F | Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid |
| KNIFDBKJ_00008 | 9.5e-243 | pncB | 6.3.4.21 | F | Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP | |
| KNIFDBKJ_00009 | 1.8e-129 | nadE | 6.3.1.5 | F | Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source | |
| KNIFDBKJ_00010 | 1.7e-251 | yhgF | K | Tex-like protein N-terminal domain protein | ||
| KNIFDBKJ_00011 | 3e-43 | ydcK | S | Belongs to the SprT family | ||
| KNIFDBKJ_00013 | 3.5e-116 | fabH | 2.3.1.180 | I | Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids | |
| KNIFDBKJ_00014 | 2.9e-128 | mleP2 | S | Sodium Bile acid symporter family | ||
| KNIFDBKJ_00015 | 2.9e-85 | gpmA | 5.4.2.11 | G | Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate | |
| KNIFDBKJ_00016 | 1e-33 | S | Enterocin A Immunity | |||
| KNIFDBKJ_00017 | 5.8e-223 | pepC | 3.4.22.40 | E | Peptidase C1-like family | |
| KNIFDBKJ_00018 | 8.1e-18 | HA62_12640 | S | GCN5-related N-acetyl-transferase | ||
| KNIFDBKJ_00019 | 4e-74 | dut | 3.6.1.23, 4.1.1.36, 6.3.2.5 | F | dUTP diphosphatase | |
| KNIFDBKJ_00020 | 3.5e-223 | radA | O | DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function | ||
| KNIFDBKJ_00021 | 3.1e-153 | yacL | S | domain protein | ||
| KNIFDBKJ_00022 | 1.4e-246 | gltX | 6.1.1.17, 6.1.1.24 | J | Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) | |
| KNIFDBKJ_00023 | 2.8e-207 | cysS | 6.1.1.16, 6.3.1.13 | J | Belongs to the class-I aminoacyl-tRNA synthetase family | |
| KNIFDBKJ_00024 | 3.8e-56 | mrnC | J | Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc) | ||
| KNIFDBKJ_00025 | 1.2e-108 | rlmB | 2.1.1.185 | J | Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family | |
| KNIFDBKJ_00026 | 7e-71 | yacP | S | YacP-like NYN domain | ||
| KNIFDBKJ_00027 | 3.1e-19 | rpmG | J | Belongs to the bacterial ribosomal protein bL33 family | ||
| KNIFDBKJ_00028 | 2.6e-11 | secE | U | Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation | ||
| KNIFDBKJ_00029 | 7.7e-84 | nusG | K | Participates in transcription elongation, termination and antitermination | ||
| KNIFDBKJ_00030 | 5e-67 | rplK | J | Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors | ||
| KNIFDBKJ_00031 | 1.6e-115 | rplA | J | Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release | ||
| KNIFDBKJ_00032 | 1.7e-74 | rplJ | J | Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors | ||
| KNIFDBKJ_00033 | 2.6e-48 | rplL | J | Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation | ||
| KNIFDBKJ_00034 | 1.6e-55 | |||||
| KNIFDBKJ_00035 | 2.7e-301 | mprF | 2.3.2.3 | S | Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms | |
| KNIFDBKJ_00036 | 1e-160 | nrdF | 1.17.4.1 | F | Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides | |
| KNIFDBKJ_00037 | 0.0 | nrdE | 1.17.4.1 | F | Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides | |
| KNIFDBKJ_00038 | 4.8e-45 | nrdI | F | NrdI Flavodoxin like | ||
| KNIFDBKJ_00039 | 1.2e-27 | nrdH | O | Glutaredoxin | ||
| KNIFDBKJ_00040 | 6.4e-76 | rsmC | 2.1.1.172 | J | Methyltransferase | |
| KNIFDBKJ_00041 | 3.3e-62 | tadA | 3.5.4.33 | F | Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) | |
| KNIFDBKJ_00042 | 4.6e-212 | dnaX | 2.7.7.7 | L | DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity | |
| KNIFDBKJ_00043 | 7e-34 | yaaK | S | Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection | ||
| KNIFDBKJ_00044 | 2.2e-97 | recR | L | May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO | ||
| KNIFDBKJ_00045 | 7.1e-29 | yaaL | S | Protein of unknown function (DUF2508) | ||
| KNIFDBKJ_00046 | 8.1e-66 | tmk | 2.7.4.9 | F | Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis | |
| KNIFDBKJ_00047 | 3e-83 | holB | 2.7.7.7 | L | DNA polymerase III | |
| KNIFDBKJ_00048 | 1.4e-40 | yabA | L | Involved in initiation control of chromosome replication | ||
| KNIFDBKJ_00049 | 3.3e-105 | rsmI | 2.1.1.198 | H | Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA | |
| KNIFDBKJ_00050 | 7.2e-82 | fat | 3.1.2.21 | I | Acyl-ACP thioesterase | |
| KNIFDBKJ_00051 | 1.2e-140 | ansA | 3.5.1.1 | EJ | Asparaginase | |
| KNIFDBKJ_00052 | 2.4e-69 | yeaZ | 2.3.1.234 | O | Universal bacterial protein YeaZ | |
| KNIFDBKJ_00053 | 1.1e-28 | rimI | 2.3.1.128 | K | Ribosomal-protein-alanine acetyltransferase | |
| KNIFDBKJ_00054 | 9.2e-160 | tsaD | 2.3.1.234 | J | Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction | |
| KNIFDBKJ_00055 | 2.6e-256 | uup | S | ABC transporter, ATP-binding protein | ||
| KNIFDBKJ_00056 | 9.7e-99 | rex | K | Modulates transcription in response to changes in cellular NADH NAD( ) redox state | ||
| KNIFDBKJ_00057 | 1.3e-31 | S | CAAX protease self-immunity | |||
| KNIFDBKJ_00058 | 2.4e-33 | groS | O | Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter | ||
| KNIFDBKJ_00059 | 3.1e-271 | groL | O | Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions | ||
| KNIFDBKJ_00060 | 3.7e-268 | aha1 | P | COG COG0474 Cation transport ATPase | ||
| KNIFDBKJ_00061 | 4.9e-297 | ydaO | E | amino acid | ||
| KNIFDBKJ_00062 | 1.6e-157 | tagO | 2.7.8.33, 2.7.8.35 | M | transferase | |
| KNIFDBKJ_00063 | 1.9e-128 | comFA | L | Helicase C-terminal domain protein | ||
| KNIFDBKJ_00064 | 3e-50 | comFC | S | Competence protein | ||
| KNIFDBKJ_00065 | 2.1e-81 | hpf | J | Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase | ||
| KNIFDBKJ_00066 | 9.1e-95 | yeaN | P | Major Facilitator Superfamily | ||
| KNIFDBKJ_00067 | 0.0 | secA | U | Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane | ||
| KNIFDBKJ_00068 | 4.9e-164 | prfB | J | Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA | ||
| KNIFDBKJ_00069 | 9.1e-68 | minJ | O | Domain present in PSD-95, Dlg, and ZO-1/2. | ||
| KNIFDBKJ_00070 | 1.3e-85 | K | response regulator | |||
| KNIFDBKJ_00071 | 5.3e-86 | phoR | 2.7.13.3 | T | Histidine kinase | |
| KNIFDBKJ_00072 | 4.1e-08 | KT | PspC domain protein | |||
| KNIFDBKJ_00073 | 3.5e-26 | yvlD | S | Mycobacterial 4 TMS phage holin, superfamily IV | ||
| KNIFDBKJ_00074 | 7.4e-132 | hprK | F | Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion | ||
| KNIFDBKJ_00075 | 1.1e-112 | lgt | 2.1.1.199 | M | Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins | |
| KNIFDBKJ_00076 | 6.1e-273 | pgm | 5.4.2.2, 5.4.2.8 | G | Phosphoglucomutase phosphomannomutase, alpha beta alpha domain | |
| KNIFDBKJ_00077 | 0.0 | uvrB | L | damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage | ||
| KNIFDBKJ_00078 | 0.0 | uvrA | L | The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate | ||
| KNIFDBKJ_00079 | 1.1e-83 | luxS | 4.4.1.21 | H | Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) | |
| KNIFDBKJ_00080 | 1.3e-79 | ylbE | GM | NAD dependent epimerase dehydratase family protein | ||
| KNIFDBKJ_00081 | 7.5e-126 | rapZ | S | Displays ATPase and GTPase activities | ||
| KNIFDBKJ_00082 | 6.3e-153 | ybhK | S | Required for morphogenesis under gluconeogenic growth conditions | ||
| KNIFDBKJ_00083 | 1.8e-149 | whiA | K | May be required for sporulation | ||
| KNIFDBKJ_00084 | 1.1e-99 | clpP | 3.4.21.92 | O | Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins | |
| KNIFDBKJ_00086 | 2.4e-136 | cggR | K | Putative sugar-binding domain | ||
| KNIFDBKJ_00087 | 6.1e-180 | gap | 1.2.1.12 | G | Belongs to the glyceraldehyde-3-phosphate dehydrogenase family | |
| KNIFDBKJ_00088 | 1.1e-207 | pgk | 2.7.2.3, 5.3.1.1 | F | Belongs to the phosphoglycerate kinase family | |
| KNIFDBKJ_00089 | 2.3e-128 | tpiA | 2.7.2.3, 5.3.1.1 | G | Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) | |
| KNIFDBKJ_00090 | 9.5e-234 | eno | 4.2.1.11 | G | Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis | |
| KNIFDBKJ_00091 | 1.4e-131 | dinB | 2.7.7.7 | L | Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII | |
| KNIFDBKJ_00092 | 7.2e-103 | K | response regulator | |||
| KNIFDBKJ_00093 | 1.8e-169 | T | PhoQ Sensor | |||
| KNIFDBKJ_00094 | 1.1e-145 | lmrP | E | Major Facilitator Superfamily | ||
| KNIFDBKJ_00095 | 9.2e-180 | clcA | P | chloride | ||
| KNIFDBKJ_00096 | 2.8e-19 | secG | U | Preprotein translocase | ||
| KNIFDBKJ_00097 | 0.0 | rnr | J | 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs | ||
| KNIFDBKJ_00098 | 6.9e-70 | smpB | J | the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA | ||
| KNIFDBKJ_00099 | 3.1e-42 | yxjI | ||||
| KNIFDBKJ_00100 | 1.8e-116 | ycsE | S | Sucrose-6F-phosphate phosphohydrolase | ||
| KNIFDBKJ_00101 | 8.9e-106 | ung | 3.2.2.27 | L | Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine | |
| KNIFDBKJ_00102 | 2e-143 | pta | 2.3.1.8, 3.6.3.21 | C | phosphate acetyltransferase | |
| KNIFDBKJ_00103 | 4.2e-56 | ydiB | 2.7.1.221, 5.1.1.1 | O | Hydrolase, P-loop family | |
| KNIFDBKJ_00104 | 3e-69 | dnaQ | 2.7.7.7 | L | DNA polymerase III |
Showing 1 to 100 of 1,693 entries
eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)