ORF_ID e_value Gene_name EC_number CAZy COGs Description
PCICODFN_00001 4e-202 hsdM 2.1.1.72 V type I restriction-modification system
PCICODFN_00002 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PCICODFN_00004 5.2e-81 XK27_07525 3.6.1.55 F Hydrolase, nudix family
PCICODFN_00005 5.7e-57 3.6.1.27 I Acid phosphatase homologues
PCICODFN_00006 1.8e-68 maa 2.3.1.79 S Maltose acetyltransferase
PCICODFN_00007 1.3e-08 J GNAT acetyltransferase
PCICODFN_00008 5.3e-56 2.3.1.178 M GNAT acetyltransferase
PCICODFN_00010 1.4e-197 ade 3.5.4.2 F Adenine deaminase C-terminal domain
PCICODFN_00011 3.5e-65 ypsA S Belongs to the UPF0398 family
PCICODFN_00012 1.4e-187 nhaC C Na H antiporter NhaC
PCICODFN_00013 1.8e-76 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PCICODFN_00014 1.1e-293 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PCICODFN_00015 4.3e-113 xerD D recombinase XerD
PCICODFN_00016 2.4e-124 cvfB S S1 domain
PCICODFN_00017 4.1e-51 yeaL S Protein of unknown function (DUF441)
PCICODFN_00018 4.5e-58 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PCICODFN_00019 5.8e-100 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PCICODFN_00020 1.1e-56 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PCICODFN_00021 7e-59 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PCICODFN_00022 4.6e-37 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCICODFN_00023 7.8e-218 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PCICODFN_00024 7e-79 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PCICODFN_00025 6e-123 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PCICODFN_00026 4.5e-179 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PCICODFN_00027 1.2e-100 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PCICODFN_00029 1.6e-42 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PCICODFN_00030 1e-27 ysxB J Cysteine protease Prp
PCICODFN_00031 8.3e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
PCICODFN_00034 2.9e-08 S Protein of unknown function (DUF2922)
PCICODFN_00036 1.3e-16 K DNA-templated transcription, initiation
PCICODFN_00038 1.1e-64 H Methyltransferase domain
PCICODFN_00039 1.7e-75 cps2D 5.1.3.2 M RmlD substrate binding domain
PCICODFN_00040 1.3e-40 wecD M Acetyltransferase (GNAT) family
PCICODFN_00042 4.7e-26 ybl78 L Conserved phage C-terminus (Phg_2220_C)
PCICODFN_00043 3.4e-41 S Protein of unknown function (DUF1211)
PCICODFN_00044 1.1e-85 1.1.1.1 C Zinc-binding dehydrogenase
PCICODFN_00045 2.7e-30 S CHY zinc finger
PCICODFN_00046 2.1e-39 K Transcriptional regulator
PCICODFN_00047 3.4e-83 qorB 1.6.5.2 GM NmrA-like family
PCICODFN_00048 6.3e-09
PCICODFN_00050 5.6e-126 M Glycosyl transferases group 1
PCICODFN_00051 3.4e-64 M Glycosyl transferases group 1
PCICODFN_00052 3.5e-166 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PCICODFN_00053 8e-146 lspL 5.1.3.6 GM RmlD substrate binding domain
PCICODFN_00054 1.4e-103 cps2I S Psort location CytoplasmicMembrane, score
PCICODFN_00055 2.3e-60 cps1B GT2,GT4 M Glycosyl transferases group 1
PCICODFN_00056 8e-117 S Glycosyltransferase WbsX
PCICODFN_00057 5.4e-53
PCICODFN_00059 9.7e-57 pglI 2.4.1.293 GT2 M Glycosyltransferase like family 2
PCICODFN_00060 3.3e-41 GT2 S Glycosyltransferase, group 2 family protein
PCICODFN_00061 2.9e-74 M Glycosyltransferase Family 4
PCICODFN_00062 3.2e-76 gtf1 2.4.1.52 GT4 M glycosyl transferase group 1
PCICODFN_00063 3.6e-80 gtf1 2.4.1.52 GT4 M glycosyl transferase group 1
PCICODFN_00064 1.2e-120 2.4.1.52 GT4 M Glycosyl transferases group 1
PCICODFN_00065 2.2e-25 pglD 2.3.1.203 S Bacterial transferase hexapeptide (six repeats)
PCICODFN_00066 1.6e-77 epsL M Bacterial sugar transferase
PCICODFN_00067 1.4e-167 2.6.1.102 M Belongs to the DegT DnrJ EryC1 family
PCICODFN_00068 1.6e-221 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 M Psort location CytoplasmicMembrane, score
PCICODFN_00069 2.1e-64 cpsD D AAA domain
PCICODFN_00070 1.2e-47 cps4C M Chain length determinant protein
PCICODFN_00071 3e-42 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PCICODFN_00072 1.3e-177 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PCICODFN_00073 8.1e-81
PCICODFN_00074 1.8e-83 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PCICODFN_00075 1e-113 yitU 3.1.3.104 S hydrolase
PCICODFN_00076 2.1e-59 speG J Acetyltransferase (GNAT) domain
PCICODFN_00077 2.6e-191 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PCICODFN_00078 1.1e-23 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PCICODFN_00079 1.7e-204 pipD E Dipeptidase
PCICODFN_00080 1.9e-44
PCICODFN_00081 1.6e-64 K helix_turn_helix, arabinose operon control protein
PCICODFN_00082 9.9e-53 S Membrane
PCICODFN_00083 0.0 rafA 3.2.1.22 G alpha-galactosidase
PCICODFN_00084 2.3e-59 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
PCICODFN_00085 2.2e-307 L Helicase C-terminal domain protein
PCICODFN_00086 1.1e-50 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PCICODFN_00087 1.7e-38 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
PCICODFN_00088 1.4e-113 2.7.7.65 T diguanylate cyclase activity
PCICODFN_00089 9.4e-222 ydaN S Bacterial cellulose synthase subunit
PCICODFN_00090 3.9e-75 ydaN S Bacterial cellulose synthase subunit
PCICODFN_00091 1.5e-201 ydaM M Glycosyl transferase family group 2
PCICODFN_00092 2e-158 S Protein conserved in bacteria
PCICODFN_00093 5.5e-36 S Protein conserved in bacteria
PCICODFN_00094 7.9e-181
PCICODFN_00095 3.6e-127 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
PCICODFN_00096 4.9e-32 2.7.7.65 T GGDEF domain
PCICODFN_00098 1.5e-146 pbuO_1 S Permease family
PCICODFN_00099 1.9e-156 ndh 1.6.99.3 C NADH dehydrogenase
PCICODFN_00100 2e-105 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PCICODFN_00101 3.1e-96 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PCICODFN_00102 2.3e-219 cydD CO ABC transporter transmembrane region
PCICODFN_00103 1.7e-203 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PCICODFN_00104 2.5e-141 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PCICODFN_00105 7.9e-194 cydA 1.10.3.14 C ubiquinol oxidase
PCICODFN_00106 6.9e-160 asnA 6.3.1.1 F aspartate--ammonia ligase
PCICODFN_00107 2.4e-27 xlyB 3.5.1.28 CBM50 M LysM domain
PCICODFN_00108 5e-19 glpE P Rhodanese Homology Domain
PCICODFN_00109 4.2e-49 lytE M LysM domain protein
PCICODFN_00110 1.4e-92 T Calcineurin-like phosphoesterase superfamily domain
PCICODFN_00111 5.7e-85 2.7.7.12 C Domain of unknown function (DUF4931)
PCICODFN_00113 4.4e-74 draG O ADP-ribosylglycohydrolase
PCICODFN_00114 1.6e-101 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PCICODFN_00115 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PCICODFN_00116 1.1e-61 divIVA D DivIVA domain protein
PCICODFN_00117 1.7e-81 ylmH S S4 domain protein
PCICODFN_00118 3e-19 yggT S YGGT family
PCICODFN_00119 5e-33 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PCICODFN_00120 9.8e-180 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PCICODFN_00121 5.2e-190 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PCICODFN_00122 1.3e-61 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PCICODFN_00123 1.2e-152 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PCICODFN_00124 2.2e-185 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PCICODFN_00125 8.7e-136 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PCICODFN_00126 4e-282 ftsI 3.4.16.4 M Penicillin-binding Protein
PCICODFN_00127 2.5e-11 ftsL D cell division protein FtsL
PCICODFN_00128 8e-142 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PCICODFN_00129 1.2e-63 mraZ K Belongs to the MraZ family
PCICODFN_00130 2.2e-07 S Protein of unknown function (DUF3397)
PCICODFN_00131 1.2e-155 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PCICODFN_00133 9.8e-100 D Alpha beta
PCICODFN_00134 3.7e-109 aatB ET ABC transporter substrate-binding protein
PCICODFN_00135 1.8e-89 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PCICODFN_00136 1.9e-94 glnP P ABC transporter permease
PCICODFN_00137 1.8e-126 minD D Belongs to the ParA family
PCICODFN_00138 8.3e-77 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PCICODFN_00139 1.5e-54 mreD M rod shape-determining protein MreD
PCICODFN_00140 2.1e-88 mreC M Involved in formation and maintenance of cell shape
PCICODFN_00141 1e-155 mreB D cell shape determining protein MreB
PCICODFN_00142 4.5e-21 K Cold shock
PCICODFN_00143 3.1e-79 radC L DNA repair protein
PCICODFN_00144 4e-136 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PCICODFN_00145 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PCICODFN_00146 1.9e-196 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PCICODFN_00147 6.4e-162 iscS2 2.8.1.7 E Aminotransferase class V
PCICODFN_00148 1.3e-174 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PCICODFN_00149 7.1e-56 ytsP 1.8.4.14 T GAF domain-containing protein
PCICODFN_00150 7.5e-101 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PCICODFN_00151 3.4e-24 yueI S Protein of unknown function (DUF1694)
PCICODFN_00152 5.1e-184 rarA L recombination factor protein RarA
PCICODFN_00154 3.2e-73 usp6 T universal stress protein
PCICODFN_00155 3.7e-54 tag 3.2.2.20 L glycosylase
PCICODFN_00156 7.7e-200 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PCICODFN_00157 5.9e-125 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PCICODFN_00159 3.3e-75 yviA S Protein of unknown function (DUF421)
PCICODFN_00160 1.8e-27 S Protein of unknown function (DUF3290)
PCICODFN_00161 2.3e-279 pbp2b 3.4.16.4 M Penicillin-binding Protein
PCICODFN_00162 1.2e-296 S membrane
PCICODFN_00163 1.3e-80 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PCICODFN_00164 4e-219 recJ L Single-stranded-DNA-specific exonuclease RecJ
PCICODFN_00165 6.5e-100 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PCICODFN_00166 8.9e-141 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PCICODFN_00168 1.4e-16
PCICODFN_00169 4e-198 oatA I Acyltransferase
PCICODFN_00170 1.5e-212 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PCICODFN_00171 8.1e-305 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PCICODFN_00172 4.4e-140 hprA 1.1.1.29 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCICODFN_00175 5.7e-41 S Phosphoesterase
PCICODFN_00176 2.2e-73 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PCICODFN_00177 1.1e-60 yslB S Protein of unknown function (DUF2507)
PCICODFN_00178 9.9e-41 trxA O Belongs to the thioredoxin family
PCICODFN_00179 1.4e-309 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PCICODFN_00180 7.5e-15 cvpA S Colicin V production protein
PCICODFN_00181 1.4e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PCICODFN_00182 1.9e-33 yrzB S Belongs to the UPF0473 family
PCICODFN_00183 1e-59 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PCICODFN_00184 2.1e-36 yrzL S Belongs to the UPF0297 family
PCICODFN_00185 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PCICODFN_00186 3.9e-187 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PCICODFN_00187 2.1e-121 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PCICODFN_00188 7.5e-13
PCICODFN_00189 2.1e-147 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCICODFN_00190 3.2e-66 yrjD S LUD domain
PCICODFN_00191 1.6e-245 lutB C 4Fe-4S dicluster domain
PCICODFN_00192 6.9e-117 lutA C Cysteine-rich domain
PCICODFN_00193 2e-208 yfnA E Amino Acid
PCICODFN_00195 4.3e-61 uspA T universal stress protein
PCICODFN_00197 1.8e-12 yajC U Preprotein translocase
PCICODFN_00198 2.9e-207 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PCICODFN_00199 2.1e-183 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PCICODFN_00200 6.3e-153 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PCICODFN_00201 7.3e-72 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PCICODFN_00202 6e-224 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PCICODFN_00203 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PCICODFN_00204 2.6e-182 rny S Endoribonuclease that initiates mRNA decay
PCICODFN_00205 2.3e-159 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PCICODFN_00206 4.3e-85 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCICODFN_00207 2.9e-64 ymfM S Helix-turn-helix domain
PCICODFN_00208 8.4e-91 IQ Enoyl-(Acyl carrier protein) reductase
PCICODFN_00209 1.3e-147 ymfH S Peptidase M16
PCICODFN_00210 3.5e-108 ymfF S Peptidase M16 inactive domain protein
PCICODFN_00211 1.6e-284 ftsK D Belongs to the FtsK SpoIIIE SftA family
PCICODFN_00212 4.4e-86 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PCICODFN_00213 1.7e-98 rrmA 2.1.1.187 H Methyltransferase
PCICODFN_00214 4.9e-61 ybaK J Aminoacyl-tRNA editing domain
PCICODFN_00215 5.9e-164 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PCICODFN_00216 4e-197 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PCICODFN_00217 3.2e-21 cutC P Participates in the control of copper homeostasis
PCICODFN_00218 5.3e-131 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PCICODFN_00219 7.5e-29 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PCICODFN_00220 2.6e-226 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PCICODFN_00221 4.9e-66 ybbR S YbbR-like protein
PCICODFN_00222 8.5e-127 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PCICODFN_00223 2.4e-71 S Protein of unknown function (DUF1361)
PCICODFN_00224 1.2e-115 murB 1.3.1.98 M Cell wall formation
PCICODFN_00225 3e-69 dnaQ 2.7.7.7 L DNA polymerase III
PCICODFN_00226 2.5e-56 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PCICODFN_00227 2e-143 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PCICODFN_00228 5.2e-106 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PCICODFN_00229 1.8e-116 ycsE S Sucrose-6F-phosphate phosphohydrolase
PCICODFN_00230 9.1e-42 yxjI
PCICODFN_00231 6.9e-70 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PCICODFN_00232 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PCICODFN_00233 2.8e-19 secG U Preprotein translocase
PCICODFN_00234 5.4e-180 clcA P chloride
PCICODFN_00235 6.7e-146 lmrP E Major Facilitator Superfamily
PCICODFN_00236 1.8e-169 T PhoQ Sensor
PCICODFN_00237 5e-104 K response regulator
PCICODFN_00238 3.3e-119 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCICODFN_00239 9.5e-234 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PCICODFN_00240 2.3e-128 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PCICODFN_00241 1.3e-208 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PCICODFN_00242 6.1e-180 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCICODFN_00243 1.1e-136 cggR K Putative sugar-binding domain
PCICODFN_00245 1.1e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PCICODFN_00246 6.7e-149 whiA K May be required for sporulation
PCICODFN_00247 8.2e-153 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PCICODFN_00248 7.5e-126 rapZ S Displays ATPase and GTPase activities
PCICODFN_00249 5e-79 ylbE GM NAD dependent epimerase dehydratase family protein
PCICODFN_00250 1.1e-83 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PCICODFN_00251 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PCICODFN_00252 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PCICODFN_00253 8.1e-38 K transcriptional regulator PadR family
PCICODFN_00254 7.1e-19 XK27_06920 S Protein of unknown function (DUF1700)
PCICODFN_00255 5.3e-16 S Putative adhesin
PCICODFN_00256 2.2e-16 pspC KT PspC domain
PCICODFN_00258 3e-13 S Enterocin A Immunity
PCICODFN_00259 1.2e-235 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PCICODFN_00260 5.7e-261 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PCICODFN_00261 7.4e-100 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PCICODFN_00262 3.7e-159 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PCICODFN_00263 1.5e-120 potB P ABC transporter permease
PCICODFN_00264 1.7e-103 potC U Binding-protein-dependent transport system inner membrane component
PCICODFN_00265 1.3e-159 potD P ABC transporter
PCICODFN_00266 7.8e-132 ABC-SBP S ABC transporter
PCICODFN_00267 4.3e-113 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PCICODFN_00268 1.4e-107 XK27_08845 S ABC transporter, ATP-binding protein
PCICODFN_00269 1.5e-67 M ErfK YbiS YcfS YnhG
PCICODFN_00270 4.1e-54 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PCICODFN_00271 1.4e-224 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PCICODFN_00272 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PCICODFN_00273 1.2e-102 pgm3 G phosphoglycerate mutase
PCICODFN_00274 8.5e-58 S CAAX protease self-immunity
PCICODFN_00275 2e-45 C Flavodoxin
PCICODFN_00276 1.2e-57 yphH S Cupin domain
PCICODFN_00277 1e-45 yphJ 4.1.1.44 S decarboxylase
PCICODFN_00278 1.2e-144 2.1.1.14 E methionine synthase, vitamin-B12 independent
PCICODFN_00279 5.1e-108 metQ1 P Belongs to the nlpA lipoprotein family
PCICODFN_00280 2e-149 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCICODFN_00281 1.3e-69 metI P ABC transporter permease
PCICODFN_00282 8.8e-135 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PCICODFN_00283 3e-84 drgA C nitroreductase
PCICODFN_00284 1.1e-83 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PCICODFN_00285 1.7e-106 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
PCICODFN_00286 1.1e-171 npr 1.11.1.1 S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PCICODFN_00287 1.7e-264 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PCICODFN_00289 6.2e-151 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCICODFN_00290 2.4e-31 metI U ABC transporter permease
PCICODFN_00291 1.5e-128 metQ M Belongs to the nlpA lipoprotein family
PCICODFN_00292 9.3e-58 S Protein of unknown function (DUF4256)
PCICODFN_00295 4.7e-178 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PCICODFN_00296 2.8e-166 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PCICODFN_00297 7.6e-180 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PCICODFN_00298 4e-230 lpdA 1.8.1.4 C Dehydrogenase
PCICODFN_00299 7.3e-149 lplA 6.3.1.20 H Lipoate-protein ligase
PCICODFN_00300 9.2e-56 S Protein of unknown function (DUF975)
PCICODFN_00301 2.2e-77 E GDSL-like Lipase/Acylhydrolase family
PCICODFN_00302 6.1e-39
PCICODFN_00303 4.1e-27 gcvR T Belongs to the UPF0237 family
PCICODFN_00304 2.1e-220 XK27_08635 S UPF0210 protein
PCICODFN_00305 4.5e-87 fruR K DeoR C terminal sensor domain
PCICODFN_00306 4.1e-151 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PCICODFN_00307 5.1e-268 fruA 2.7.1.202 GT Phosphotransferase System
PCICODFN_00308 1.2e-49 cps3F
PCICODFN_00309 2.7e-83 S Membrane
PCICODFN_00310 1.8e-254 E Amino acid permease
PCICODFN_00311 5e-225 cadA P P-type ATPase
PCICODFN_00312 6.4e-114 degV S EDD domain protein, DegV family
PCICODFN_00313 1.9e-148 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PCICODFN_00314 5.6e-57 yfeJ 6.3.5.2 F glutamine amidotransferase
PCICODFN_00315 1.9e-27 ydiI Q Thioesterase superfamily
PCICODFN_00316 1.5e-144 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PCICODFN_00317 5.6e-139 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PCICODFN_00318 7.2e-73 S L,D-transpeptidase catalytic domain
PCICODFN_00319 4.4e-165 EGP Major facilitator Superfamily
PCICODFN_00320 1.1e-21 K helix_turn_helix multiple antibiotic resistance protein
PCICODFN_00321 6e-226 pipD E Dipeptidase
PCICODFN_00322 7e-126 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PCICODFN_00323 2.6e-32 ywjH S Protein of unknown function (DUF1634)
PCICODFN_00324 1.6e-114 yxaA S membrane transporter protein
PCICODFN_00325 3.9e-272 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PCICODFN_00326 1.9e-112 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PCICODFN_00327 9.6e-132 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PCICODFN_00328 1.6e-26 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PCICODFN_00329 3.2e-08 KT PspC domain protein
PCICODFN_00330 3.5e-85 phoR 2.7.13.3 T Histidine kinase
PCICODFN_00331 4.6e-86 K response regulator
PCICODFN_00332 1.5e-67 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PCICODFN_00333 1.2e-162 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PCICODFN_00334 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PCICODFN_00335 1.7e-96 yeaN P Major Facilitator Superfamily
PCICODFN_00336 6e-81 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PCICODFN_00337 1e-45 comFC S Competence protein
PCICODFN_00338 6e-127 comFA L Helicase C-terminal domain protein
PCICODFN_00339 1.6e-157 tagO 2.7.8.33, 2.7.8.35 M transferase
PCICODFN_00340 4.1e-296 ydaO E amino acid
PCICODFN_00341 2.8e-268 aha1 P COG COG0474 Cation transport ATPase
PCICODFN_00342 3.7e-272 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PCICODFN_00343 2.4e-33 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PCICODFN_00344 5.3e-33 S CAAX protease self-immunity
PCICODFN_00345 1.3e-98 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PCICODFN_00346 1.9e-254 uup S ABC transporter, ATP-binding protein
PCICODFN_00347 2.9e-161 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PCICODFN_00348 4.3e-28 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PCICODFN_00349 2.8e-70 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PCICODFN_00350 1.6e-140 ansA 3.5.1.1 EJ Asparaginase
PCICODFN_00351 5.5e-82 fat 3.1.2.21 I Acyl-ACP thioesterase
PCICODFN_00352 3.2e-92 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PCICODFN_00353 1.4e-40 yabA L Involved in initiation control of chromosome replication
PCICODFN_00354 5.2e-83 holB 2.7.7.7 L DNA polymerase III
PCICODFN_00355 1.8e-65 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PCICODFN_00356 9.2e-29 yaaL S Protein of unknown function (DUF2508)
PCICODFN_00357 2.2e-97 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PCICODFN_00358 7e-34 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PCICODFN_00359 5.1e-211 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PCICODFN_00360 3.3e-62 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PCICODFN_00361 6.4e-76 rsmC 2.1.1.172 J Methyltransferase
PCICODFN_00362 3.5e-27 nrdH O Glutaredoxin
PCICODFN_00363 4.8e-45 nrdI F NrdI Flavodoxin like
PCICODFN_00364 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCICODFN_00365 1e-160 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCICODFN_00366 2.1e-301 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PCICODFN_00367 1.4e-54
PCICODFN_00368 2.6e-48 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PCICODFN_00369 7.6e-75 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PCICODFN_00370 1.6e-115 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PCICODFN_00371 5e-67 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PCICODFN_00372 7.7e-84 nusG K Participates in transcription elongation, termination and antitermination
PCICODFN_00373 2.6e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PCICODFN_00374 2.1e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PCICODFN_00375 2e-52 yacP S YacP-like NYN domain
PCICODFN_00376 1.6e-108 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCICODFN_00377 6.4e-56 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PCICODFN_00378 3.6e-207 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCICODFN_00379 2.9e-247 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PCICODFN_00380 8.2e-154 yacL S domain protein
PCICODFN_00381 1e-222 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PCICODFN_00382 6.9e-74 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PCICODFN_00383 4.3e-19 HA62_12640 S GCN5-related N-acetyl-transferase
PCICODFN_00384 5.8e-223 pepC 3.4.22.40 E Peptidase C1-like family
PCICODFN_00385 1e-33 S Enterocin A Immunity
PCICODFN_00386 2.9e-85 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PCICODFN_00387 4.5e-129 mleP2 S Sodium Bile acid symporter family
PCICODFN_00388 4.6e-116 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PCICODFN_00390 3e-43 ydcK S Belongs to the SprT family
PCICODFN_00391 9.7e-252 yhgF K Tex-like protein N-terminal domain protein
PCICODFN_00392 1e-129 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PCICODFN_00393 3.3e-243 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PCICODFN_00394 2.1e-89 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PCICODFN_00395 4.9e-96 gntR1 K UbiC transcription regulator-associated domain protein
PCICODFN_00396 1e-89 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PCICODFN_00398 1.1e-07
PCICODFN_00399 1.6e-197 dtpT U amino acid peptide transporter
PCICODFN_00400 8.2e-216 L Probable transposase
PCICODFN_00401 1e-59 ydcZ S Putative inner membrane exporter, YdcZ
PCICODFN_00402 6.4e-87 S hydrolase
PCICODFN_00403 2.5e-205 ywfO S HD domain protein
PCICODFN_00404 9.8e-86 yfeJ 6.3.5.2 F glutamine amidotransferase
PCICODFN_00405 1.8e-32 ywiB S Domain of unknown function (DUF1934)
PCICODFN_00406 9.8e-42 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PCICODFN_00407 1.2e-288 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PCICODFN_00410 1e-200 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PCICODFN_00411 1.2e-188 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PCICODFN_00412 3.6e-41 rpmE2 J Ribosomal protein L31
PCICODFN_00413 2.8e-61
PCICODFN_00414 7.8e-255 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PCICODFN_00416 8e-79 S Cell surface protein
PCICODFN_00419 1.6e-180 pbuG S permease
PCICODFN_00420 8.4e-65 S Uncharacterized protein conserved in bacteria (DUF2263)
PCICODFN_00421 3.1e-179 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PCICODFN_00422 3.4e-208 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PCICODFN_00423 1.6e-30 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PCICODFN_00424 4.8e-146 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PCICODFN_00425 5.4e-13
PCICODFN_00426 3.4e-48 ndoA L Toxic component of a toxin-antitoxin (TA) module
PCICODFN_00427 2.5e-91 yunF F Protein of unknown function DUF72
PCICODFN_00428 2.9e-156 nrnB S DHHA1 domain
PCICODFN_00429 3.7e-43 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PCICODFN_00430 2.2e-59
PCICODFN_00431 6e-49 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain (presumed)
PCICODFN_00432 5.4e-23 S Cytochrome B5
PCICODFN_00433 1.1e-19 sigH K DNA-templated transcription, initiation
PCICODFN_00434 2.9e-68 recX 2.4.1.337 GT4 S Regulatory protein RecX
PCICODFN_00435 3.2e-192 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCICODFN_00436 2.6e-97 ygaC J Belongs to the UPF0374 family
PCICODFN_00437 6.9e-92 yueF S AI-2E family transporter
PCICODFN_00438 6.5e-158 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PCICODFN_00439 1.4e-108 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PCICODFN_00440 4e-279 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PCICODFN_00441 6.3e-36
PCICODFN_00442 0.0 lacL 3.2.1.23 G -beta-galactosidase
PCICODFN_00443 1.1e-225 lacS G Transporter
PCICODFN_00444 5.9e-111 galR K Transcriptional regulator
PCICODFN_00445 2.6e-179 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PCICODFN_00446 2.3e-163 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PCICODFN_00447 1.2e-200 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PCICODFN_00448 0.0 rafA 3.2.1.22 G alpha-galactosidase
PCICODFN_00449 5e-105 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
PCICODFN_00450 3e-23 XK27_09445 S Domain of unknown function (DUF1827)
PCICODFN_00451 0.0 clpE O Belongs to the ClpA ClpB family
PCICODFN_00452 1.5e-15
PCICODFN_00453 9.7e-37 ptsH G phosphocarrier protein HPR
PCICODFN_00454 2.4e-285 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PCICODFN_00455 3.9e-162 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PCICODFN_00456 1.2e-127 cpoA GT4 M Glycosyltransferase, group 1 family protein
PCICODFN_00457 1.5e-130 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PCICODFN_00458 6.8e-26 ykuJ S Protein of unknown function (DUF1797)
PCICODFN_00459 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PCICODFN_00460 1.3e-63
PCICODFN_00462 2.7e-38 L COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PCICODFN_00463 2.3e-22
PCICODFN_00464 4.6e-57 spoVK O ATPase family associated with various cellular activities (AAA)
PCICODFN_00466 2.2e-86 S overlaps another CDS with the same product name
PCICODFN_00467 2.1e-125 S overlaps another CDS with the same product name
PCICODFN_00468 4.5e-100 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PCICODFN_00469 1.2e-34 ytkL S Belongs to the UPF0173 family
PCICODFN_00470 2.1e-18 ytkL S Beta-lactamase superfamily domain
PCICODFN_00471 5.1e-290 ybiT S ABC transporter, ATP-binding protein
PCICODFN_00472 6.7e-78 2.4.2.3 F Phosphorylase superfamily
PCICODFN_00473 1.7e-24
PCICODFN_00474 3.1e-113 dkg S reductase
PCICODFN_00475 3.1e-20 rimL 1.1.1.25 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PCICODFN_00476 2.3e-168 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCICODFN_00477 1.1e-192 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PCICODFN_00478 1.9e-47 EGP Transmembrane secretion effector
PCICODFN_00479 5.2e-137 purR 2.4.2.7 F pur operon repressor
PCICODFN_00480 6.6e-53 adhR K helix_turn_helix, mercury resistance
PCICODFN_00481 3.9e-185 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PCICODFN_00482 4.4e-101 pfoS S Phosphotransferase system, EIIC
PCICODFN_00483 9e-128 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCICODFN_00484 4e-151 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PCICODFN_00485 6.5e-197 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PCICODFN_00486 1.7e-201 argH 4.3.2.1 E argininosuccinate lyase
PCICODFN_00488 1.1e-154 amtB P ammonium transporter
PCICODFN_00489 4.8e-117 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PCICODFN_00490 1.4e-47 argR K Regulates arginine biosynthesis genes
PCICODFN_00491 5.5e-134 arcT 2.6.1.1 E Cys/Met metabolism PLP-dependent enzyme
PCICODFN_00492 2.8e-90 S Alpha/beta hydrolase of unknown function (DUF915)
PCICODFN_00493 2.7e-22 veg S Biofilm formation stimulator VEG
PCICODFN_00494 1.4e-132 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PCICODFN_00495 3.4e-87 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PCICODFN_00496 7.8e-103 tatD L hydrolase, TatD family
PCICODFN_00497 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PCICODFN_00498 3.9e-128
PCICODFN_00499 3.3e-151 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PCICODFN_00500 7.2e-43 VPA1512 ET Bacterial extracellular solute-binding proteins, family 3
PCICODFN_00501 7.9e-32 K Bacterial regulatory proteins, tetR family
PCICODFN_00502 5.9e-104 ybhR V ABC transporter
PCICODFN_00503 4.2e-82 ybhF_2 V AAA domain, putative AbiEii toxin, Type IV TA system
PCICODFN_00504 1.6e-102 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PCICODFN_00505 6.7e-171 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCICODFN_00506 3.5e-127 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PCICODFN_00507 2e-271 helD 3.6.4.12 L DNA helicase
PCICODFN_00509 2e-46 S CRISPR-associated protein (Cas_Csn2)
PCICODFN_00510 6.5e-37 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCICODFN_00511 3.9e-106 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCICODFN_00512 2.8e-191 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PCICODFN_00513 2.4e-135 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PCICODFN_00514 3.5e-48 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PCICODFN_00515 2.4e-75 ung2 3.2.2.27 L Uracil-DNA glycosylase
PCICODFN_00516 4.9e-165 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCICODFN_00517 4.7e-130 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PCICODFN_00518 2.1e-70 mltD CBM50 M NlpC P60 family protein
PCICODFN_00519 9.5e-16 S Protein of unknown function (DUF805)
PCICODFN_00520 2.4e-52 manO S Domain of unknown function (DUF956)
PCICODFN_00521 6.1e-147 manN G system, mannose fructose sorbose family IID component
PCICODFN_00522 6.4e-116 manY G PTS system sorbose-specific iic component
PCICODFN_00523 9e-152 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PCICODFN_00524 1.1e-80 rbsB G sugar-binding domain protein
PCICODFN_00525 1.1e-98 baeS T Histidine kinase
PCICODFN_00526 3.9e-79 baeR K Bacterial regulatory proteins, luxR family
PCICODFN_00527 2.8e-121 G Bacterial extracellular solute-binding protein
PCICODFN_00528 1.2e-70 S Protein of unknown function (DUF554)
PCICODFN_00529 1.8e-39 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCICODFN_00530 1.9e-32 merR K MerR HTH family regulatory protein
PCICODFN_00531 2.1e-197 lmrB EGP Major facilitator Superfamily
PCICODFN_00532 9.1e-34 S Domain of unknown function (DUF4811)
PCICODFN_00533 1.1e-41 S CAAX protease self-immunity
PCICODFN_00534 2.2e-60 yceE S haloacid dehalogenase-like hydrolase
PCICODFN_00535 7.6e-74 glcR K DeoR C terminal sensor domain
PCICODFN_00536 2.8e-94 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PCICODFN_00537 2.1e-54 bioY S BioY family
PCICODFN_00538 5.3e-94 S Predicted membrane protein (DUF2207)
PCICODFN_00539 1.4e-19
PCICODFN_00540 1.3e-36 M Glycosyltransferase group 2 family protein
PCICODFN_00541 5.7e-54 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PCICODFN_00542 4.8e-58 ktrA P TrkA-N domain
PCICODFN_00543 1.2e-114 ntpJ P Potassium uptake protein
PCICODFN_00544 2.6e-183 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PCICODFN_00545 5.2e-281 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
PCICODFN_00546 4.1e-217 scrB 3.2.1.26 GH32 G invertase
PCICODFN_00547 1.3e-114 htpX O Belongs to the peptidase M48B family
PCICODFN_00548 3.3e-71 lemA S LemA family
PCICODFN_00549 5.4e-55 L phosphatase homologous to the C-terminal domain of histone macroH2A1
PCICODFN_00550 3.5e-26 S Sel1-like repeats.
PCICODFN_00551 3.2e-45 yjcF K protein acetylation
PCICODFN_00553 1.8e-254 yfiC V ABC transporter
PCICODFN_00554 7.6e-223 lmrA V ABC transporter, ATP-binding protein
PCICODFN_00555 3.4e-35 K Bacterial regulatory proteins, tetR family
PCICODFN_00556 2.8e-245 yhcA V ABC transporter, ATP-binding protein
PCICODFN_00557 5.3e-224 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PCICODFN_00558 3.9e-146 G Transporter, major facilitator family protein
PCICODFN_00559 1.5e-91 lacX 5.1.3.3 G Aldose 1-epimerase
PCICODFN_00560 3.3e-142 hpk31 2.7.13.3 T Histidine kinase
PCICODFN_00561 2.5e-113 K response regulator
PCICODFN_00562 5.2e-90 patB 4.4.1.8 E Aminotransferase, class I
PCICODFN_00563 2.9e-91 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PCICODFN_00564 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PCICODFN_00565 1.3e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PCICODFN_00566 6.1e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PCICODFN_00567 3.3e-23 pilD 3.4.23.43 NOU aspartic-type endopeptidase activity
PCICODFN_00568 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCICODFN_00569 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCICODFN_00570 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PCICODFN_00571 1.6e-55 ctsR K Belongs to the CtsR family
PCICODFN_00573 1.1e-119 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PCICODFN_00574 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PCICODFN_00575 6.3e-159 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PCICODFN_00576 2.1e-185 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PCICODFN_00577 2.2e-131 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PCICODFN_00586 5.1e-08
PCICODFN_00592 8.2e-219 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PCICODFN_00593 1.2e-78 sip L Belongs to the 'phage' integrase family
PCICODFN_00596 1.9e-87 S AAA domain
PCICODFN_00597 5e-42
PCICODFN_00598 1.9e-55 S sequence-specific DNA binding
PCICODFN_00599 1.2e-16
PCICODFN_00605 1.7e-24 S Bacteriophage Mu Gam like protein
PCICODFN_00607 5.9e-75 S AAA domain
PCICODFN_00608 6.7e-33 S Protein of unknown function (DUF669)
PCICODFN_00609 2.2e-93 S Putative HNHc nuclease
PCICODFN_00610 2.8e-12 K Cro/C1-type HTH DNA-binding domain
PCICODFN_00611 6.6e-34 L Conserved phage C-terminus (Phg_2220_C)
PCICODFN_00612 1.5e-124 dnaB 3.6.4.12 L DnaB-like helicase C terminal domain
PCICODFN_00613 6.3e-19
PCICODFN_00614 7.2e-42 S Protein of unknown function (DUF1064)
PCICODFN_00616 1.7e-42 S Protein of unknown function (DUF1064)
PCICODFN_00621 2.3e-28 arpU S Phage transcriptional regulator, ArpU family
PCICODFN_00622 2.2e-33
PCICODFN_00625 1.5e-41 ps333 L Terminase small subunit
PCICODFN_00626 1.5e-178 S Pfam:Terminase_3C
PCICODFN_00627 4.8e-144 S Phage portal protein, SPP1 Gp6-like
PCICODFN_00628 1.4e-92 S Phage minor capsid protein 2
PCICODFN_00630 3.9e-19 S Phage minor structural protein GP20
PCICODFN_00631 6.6e-98 S T=7 icosahedral viral capsid
PCICODFN_00632 1.2e-14
PCICODFN_00633 3e-30 S Minor capsid protein
PCICODFN_00634 4.6e-16 S Minor capsid protein
PCICODFN_00635 1e-16 S Minor capsid protein from bacteriophage
PCICODFN_00636 3.4e-38 N domain, Protein
PCICODFN_00638 3.1e-38 S Bacteriophage Gp15 protein
PCICODFN_00639 1e-106 M Phage tail tape measure protein TP901
PCICODFN_00640 5.4e-62 S Phage tail protein
PCICODFN_00641 4e-102 M Prophage endopeptidase tail
PCICODFN_00643 3.4e-21 S Calcineurin-like phosphoesterase
PCICODFN_00646 8.8e-50 yugI 5.3.1.9 J general stress protein
PCICODFN_00647 5.5e-96 trxB2 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PCICODFN_00648 5.1e-92 dedA S SNARE associated Golgi protein
PCICODFN_00649 7.8e-32 S Protein of unknown function (DUF1461)
PCICODFN_00650 2.9e-113 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PCICODFN_00651 1.9e-53 yutD S Protein of unknown function (DUF1027)
PCICODFN_00652 3e-57 S Calcineurin-like phosphoesterase
PCICODFN_00653 1.6e-183 cycA E Amino acid permease
PCICODFN_00654 7.6e-98 ytxK 2.1.1.72 L N-6 DNA Methylase
PCICODFN_00656 5.5e-11 S Putative Competence protein ComGF
PCICODFN_00658 1.5e-13
PCICODFN_00659 1.2e-27 comGC U competence protein ComGC
PCICODFN_00660 5.7e-98 comGB NU type II secretion system
PCICODFN_00661 4.7e-121 comGA NU Type II IV secretion system protein
PCICODFN_00662 2.1e-102 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PCICODFN_00663 1.5e-119 yebC K Transcriptional regulatory protein
PCICODFN_00664 3.7e-42 S VanZ like family
PCICODFN_00665 1.3e-158 ccpA K catabolite control protein A
PCICODFN_00666 1.3e-172 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PCICODFN_00667 1.5e-13
PCICODFN_00670 1.7e-74 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCICODFN_00671 2.1e-34 K helix_turn_helix, Arsenical Resistance Operon Repressor
PCICODFN_00672 2.3e-65 hly S protein, hemolysin III
PCICODFN_00673 2.5e-41 M1-874 K Domain of unknown function (DUF1836)
PCICODFN_00674 1.2e-83 S membrane
PCICODFN_00675 1.1e-79 S VIT family
PCICODFN_00676 6.8e-148 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PCICODFN_00677 2.7e-56 P Plays a role in the regulation of phosphate uptake
PCICODFN_00678 4.7e-116 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCICODFN_00679 4.5e-114 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCICODFN_00680 5.1e-122 pstA P Phosphate transport system permease protein PstA
PCICODFN_00681 4.1e-119 pstC P probably responsible for the translocation of the substrate across the membrane
PCICODFN_00682 6.4e-98 pstS P Phosphate
PCICODFN_00683 1e-41 yjbH Q Thioredoxin
PCICODFN_00684 1.9e-232 pepF E oligoendopeptidase F
PCICODFN_00685 1.1e-68 coiA 3.6.4.12 S Competence protein
PCICODFN_00686 1.2e-47 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PCICODFN_00687 6.3e-115 S N-acetylmuramoyl-L-alanine amidase activity
PCICODFN_00688 2.5e-19 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PCICODFN_00690 6.9e-95 sip L Belongs to the 'phage' integrase family
PCICODFN_00691 2.7e-15 E Zn peptidase
PCICODFN_00692 6.2e-28 S sequence-specific DNA binding
PCICODFN_00694 7.5e-19
PCICODFN_00695 1.2e-44 S AntA/AntB antirepressor
PCICODFN_00699 4.2e-53 S DNA binding
PCICODFN_00700 8.6e-13 K BRO family, N-terminal domain
PCICODFN_00701 8.5e-37 S ERF superfamily
PCICODFN_00702 3.9e-58 S Putative HNHc nuclease
PCICODFN_00703 2.6e-19 L NUMOD4 motif
PCICODFN_00705 1.3e-23 L Psort location Cytoplasmic, score
PCICODFN_00706 5.7e-27 dnaC L IstB-like ATP binding protein
PCICODFN_00710 2.2e-32 rusA L Endodeoxyribonuclease RusA
PCICODFN_00718 1.2e-31 arpU S Phage transcriptional regulator, ArpU family
PCICODFN_00719 1.7e-173 2.1.1.72 KL DNA methylase
PCICODFN_00720 1.8e-42 S endonuclease activity
PCICODFN_00721 5.3e-146 ps334 S Terminase-like family
PCICODFN_00722 1.5e-118 S Phage portal protein
PCICODFN_00723 6.7e-57 S Phage Mu protein F like protein
PCICODFN_00725 6.9e-22 S aminoacyl-tRNA ligase activity
PCICODFN_00726 2.5e-79
PCICODFN_00727 3.6e-26 S Phage gp6-like head-tail connector protein
PCICODFN_00728 2.9e-16
PCICODFN_00729 2.4e-19 S exonuclease activity
PCICODFN_00730 8.7e-26 S Protein of unknown function (DUF3168)
PCICODFN_00731 3.2e-61 S Phage major tail protein 2
PCICODFN_00732 4.6e-23 S Phage tail assembly chaperone protein, TAC
PCICODFN_00733 2e-27
PCICODFN_00734 1.1e-122 sca1 D Phage tail tape measure protein
PCICODFN_00735 3.8e-86 S phage tail
PCICODFN_00736 5e-222 M Prophage endopeptidase tail
PCICODFN_00738 5.6e-40 S Calcineurin-like phosphoesterase
PCICODFN_00741 1.3e-74 G Peptidase_C39 like family
PCICODFN_00742 9e-221 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PCICODFN_00743 8.6e-74 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PCICODFN_00744 2.8e-160 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PCICODFN_00745 1.8e-95 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PCICODFN_00746 5.4e-67 XK27_09620 S NADPH-dependent FMN reductase
PCICODFN_00747 1.1e-157 XK27_09615 S reductase
PCICODFN_00748 4.4e-39 2.7.7.65 T phosphorelay sensor kinase activity
PCICODFN_00749 1.1e-146 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PCICODFN_00750 1.4e-54 cps3I G Acyltransferase family
PCICODFN_00751 3.6e-14
PCICODFN_00752 6.5e-130 S Bacterial membrane protein YfhO
PCICODFN_00753 4.8e-161 XK27_08315 M Sulfatase
PCICODFN_00754 5.3e-70 M Domain of unknown function (DUF4422)
PCICODFN_00755 1.4e-58 cps3F
PCICODFN_00756 1.3e-87 waaB GT4 M Glycosyl transferases group 1
PCICODFN_00757 6.3e-62 S Psort location CytoplasmicMembrane, score
PCICODFN_00758 9.7e-75 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PCICODFN_00759 4.1e-177 thrC 4.2.3.1 E Threonine synthase
PCICODFN_00760 3.4e-127 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PCICODFN_00761 8.8e-168 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PCICODFN_00762 5.6e-89 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PCICODFN_00763 9.5e-102 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PCICODFN_00764 2.6e-69 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCICODFN_00765 3.7e-109 pepE 3.4.13.21 E Alpha/beta hydrolase of unknown function (DUF915)
PCICODFN_00766 3.7e-168 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PCICODFN_00767 3.6e-280 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PCICODFN_00768 3.4e-213 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PCICODFN_00769 2.8e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PCICODFN_00771 7.2e-92 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PCICODFN_00772 4.1e-43
PCICODFN_00773 3.2e-120 ica2 GT2 M Glycosyl transferase family group 2
PCICODFN_00774 1.3e-44 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PCICODFN_00775 2.9e-221 mntH P H( )-stimulated, divalent metal cation uptake system
PCICODFN_00776 1.4e-59 ypbB 5.1.3.1 S Helix-turn-helix domain
PCICODFN_00777 2.2e-127 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PCICODFN_00778 7.7e-12 M Lysin motif
PCICODFN_00779 2.6e-86 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PCICODFN_00780 2.6e-83 lytH 3.5.1.28 M Ami_3
PCICODFN_00781 1.2e-153 phoH T phosphate starvation-inducible protein PhoH
PCICODFN_00782 3e-60 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PCICODFN_00783 2.8e-30 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PCICODFN_00784 4.6e-155 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PCICODFN_00785 2e-90 recO L Involved in DNA repair and RecF pathway recombination
PCICODFN_00786 2.6e-07 dltX S D-Ala-teichoic acid biosynthesis protein
PCICODFN_00787 1.2e-219 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCICODFN_00788 1.4e-175 dltB M MBOAT, membrane-bound O-acyltransferase family
PCICODFN_00789 4.9e-29 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCICODFN_00790 2e-151 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PCICODFN_00791 1.3e-59 arsC 1.20.4.1 T Low molecular weight phosphatase family
PCICODFN_00792 2.7e-171 rpsA 1.17.7.4 J Ribosomal protein S1
PCICODFN_00793 2.2e-227 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PCICODFN_00794 8.5e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PCICODFN_00796 6.2e-23 K Acetyltransferase (GNAT) domain
PCICODFN_00797 4e-111 natA S Domain of unknown function (DUF4162)
PCICODFN_00798 2.5e-84 natB CP ABC-type Na efflux pump, permease component
PCICODFN_00799 1.8e-95 EG EamA-like transporter family
PCICODFN_00800 5.3e-81 yjjH S Calcineurin-like phosphoesterase
PCICODFN_00801 1.7e-187 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PCICODFN_00802 1.9e-40 6.3.3.2 S ASCH
PCICODFN_00803 3e-70 lepB 3.4.21.89 U Signal peptidase, peptidase S26
PCICODFN_00804 6.3e-117 degV S EDD domain protein, DegV family
PCICODFN_00805 3.1e-40 K Transcriptional regulator
PCICODFN_00806 1.6e-201 FbpA K Fibronectin-binding protein
PCICODFN_00807 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCICODFN_00808 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCICODFN_00809 3.2e-83 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PCICODFN_00810 2.2e-39 ypaA S Protein of unknown function (DUF1304)
PCICODFN_00812 6.3e-310 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PCICODFN_00813 1.9e-167 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PCICODFN_00814 0.0 dnaE 2.7.7.7 L DNA polymerase
PCICODFN_00815 4.3e-15 S Protein of unknown function (DUF2929)
PCICODFN_00816 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PCICODFN_00817 3.7e-202 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PCICODFN_00818 3.7e-41 XK27_04120 S Putative amino acid metabolism
PCICODFN_00819 5.8e-155 iscS 2.8.1.7 E Aminotransferase class V
PCICODFN_00820 4.2e-92 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PCICODFN_00822 2.2e-80 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PCICODFN_00823 1.5e-130 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PCICODFN_00824 8.5e-161 nhaC C Na H antiporter NhaC
PCICODFN_00825 5.4e-127 corA P CorA-like Mg2+ transporter protein
PCICODFN_00826 8.7e-299 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PCICODFN_00827 2.4e-205 hisS 6.1.1.21 J histidyl-tRNA synthetase
PCICODFN_00828 3.6e-150 S Tetratricopeptide repeat protein
PCICODFN_00829 1.7e-136 EG EamA-like transporter family
PCICODFN_00830 4.2e-73 alkD L DNA alkylation repair enzyme
PCICODFN_00831 6.5e-184 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PCICODFN_00832 2.8e-103 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PCICODFN_00833 6e-78 trmK 2.1.1.217 S SAM-dependent methyltransferase
PCICODFN_00834 8.7e-150 EGP Sugar (and other) transporter
PCICODFN_00836 2.8e-16 V PFAM secretion protein HlyD family protein
PCICODFN_00841 5.2e-38
PCICODFN_00842 3.8e-256 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PCICODFN_00843 6.2e-21 S Family of unknown function (DUF5322)
PCICODFN_00844 1.8e-36 rnhA 3.1.26.4 L Ribonuclease HI
PCICODFN_00845 6.1e-173 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PCICODFN_00846 1.1e-35 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PCICODFN_00848 2.4e-88 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PCICODFN_00849 4.5e-171 patA 2.6.1.1 E Aminotransferase
PCICODFN_00850 8.6e-115 glcR K DeoR C terminal sensor domain
PCICODFN_00851 1.1e-143 ppaC 3.6.1.1 C inorganic pyrophosphatase
PCICODFN_00852 8.3e-134 K Transcriptional regulator
PCICODFN_00853 2.3e-89 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PCICODFN_00854 2e-84 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PCICODFN_00855 2.2e-191 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PCICODFN_00856 2.8e-114 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PCICODFN_00857 2.7e-204 pyrP F Permease
PCICODFN_00858 1.3e-75 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PCICODFN_00859 5.6e-129 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PCICODFN_00860 5.2e-43 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PCICODFN_00861 2.5e-56 3.1.3.18 J HAD-hyrolase-like
PCICODFN_00862 1.7e-54 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PCICODFN_00863 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PCICODFN_00864 4.1e-77 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PCICODFN_00865 1.9e-116 prmA J Ribosomal protein L11 methyltransferase
PCICODFN_00866 1.3e-42 XK27_03960 S Protein of unknown function (DUF3013)
PCICODFN_00867 5.6e-143 iunH2 3.2.2.1 F nucleoside hydrolase
PCICODFN_00868 6.4e-12
PCICODFN_00869 2.2e-68 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PCICODFN_00870 1.8e-97 udk 2.7.1.48 F Cytidine monophosphokinase
PCICODFN_00871 1.3e-127 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PCICODFN_00872 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PCICODFN_00873 7.4e-173 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PCICODFN_00874 9.1e-43 yodB K Transcriptional regulator, HxlR family
PCICODFN_00875 2.1e-67 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PCICODFN_00876 1.7e-86 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCICODFN_00879 3.5e-10 XK27_07105 K Helix-turn-helix XRE-family like proteins
PCICODFN_00880 2.4e-37 K Helix-turn-helix XRE-family like proteins
PCICODFN_00881 8.4e-38 E Zn peptidase
PCICODFN_00883 9.6e-28 S Short C-terminal domain
PCICODFN_00884 1.7e-17 L nuclease
PCICODFN_00885 1.9e-13
PCICODFN_00886 1.4e-22 dinG 2.7.7.7, 3.6.4.12 L DNA-directed DNA polymerase activity
PCICODFN_00888 4.3e-14 L Belongs to the 'phage' integrase family
PCICODFN_00889 3.4e-91 L Belongs to the 'phage' integrase family
PCICODFN_00891 2e-277 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PCICODFN_00892 2.7e-35 S Repeat protein
PCICODFN_00893 1.8e-100 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PCICODFN_00894 2.1e-203 M Exporter of polyketide antibiotics
PCICODFN_00895 1.6e-128 yjjC V ATPases associated with a variety of cellular activities
PCICODFN_00896 2.3e-81 K Bacterial regulatory proteins, tetR family
PCICODFN_00897 5.8e-205 G PTS system Galactitol-specific IIC component
PCICODFN_00898 9.5e-210 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PCICODFN_00899 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PCICODFN_00900 6.2e-85 dprA LU DNA protecting protein DprA
PCICODFN_00901 4.9e-97 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCICODFN_00902 4.7e-133 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PCICODFN_00903 3.6e-24 yozE S Belongs to the UPF0346 family
PCICODFN_00904 2.2e-52 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PCICODFN_00905 6.5e-80 ypmR E GDSL-like Lipase/Acylhydrolase
PCICODFN_00907 1.3e-102 S Aldo keto reductase
PCICODFN_00908 2.4e-35 K helix_turn_helix, mercury resistance
PCICODFN_00909 8.6e-135 yvgN C Aldo keto reductase
PCICODFN_00910 3.2e-57 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PCICODFN_00911 4.4e-156 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PCICODFN_00912 2.9e-276 yfmR S ABC transporter, ATP-binding protein
PCICODFN_00913 6.6e-133 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PCICODFN_00914 1.1e-107 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PCICODFN_00915 1e-106 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PCICODFN_00916 3.9e-68 xerD L Phage integrase, N-terminal SAM-like domain
PCICODFN_00917 1.8e-56 yqeY S YqeY-like protein
PCICODFN_00918 4.7e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PCICODFN_00919 1.1e-115 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PCICODFN_00922 5.8e-100 epsJ1 M Glycosyltransferase like family 2
PCICODFN_00923 1.4e-83 M Glycosyltransferase sugar-binding region containing DXD motif
PCICODFN_00924 1.9e-93 M transferase activity, transferring glycosyl groups
PCICODFN_00925 9.6e-126 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PCICODFN_00926 8.4e-77 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PCICODFN_00927 4.4e-83 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PCICODFN_00928 5.1e-56 dnaD L DnaD domain protein
PCICODFN_00929 7.6e-236 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PCICODFN_00930 1.2e-142 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PCICODFN_00931 1.4e-36 ypmB S Protein conserved in bacteria
PCICODFN_00932 3.9e-229 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PCICODFN_00933 1.8e-93 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PCICODFN_00934 3.1e-117 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PCICODFN_00935 3e-137 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PCICODFN_00936 1.3e-113 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PCICODFN_00937 2.7e-103 holA 2.7.7.7 L DNA polymerase III delta subunit
PCICODFN_00938 3.3e-154 comEC S Competence protein ComEC
PCICODFN_00939 2e-69 comEB 3.5.4.12 F ComE operon protein 2
PCICODFN_00940 1.4e-50 comEA L Competence protein ComEA
PCICODFN_00941 6.4e-267 argS 6.1.1.19 J Arginyl-tRNA synthetase
PCICODFN_00942 6.2e-59 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PCICODFN_00943 2.2e-20
PCICODFN_00945 3.9e-122 K LysR substrate binding domain
PCICODFN_00946 2.2e-194 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PCICODFN_00947 1.5e-93 S Acyltransferase family
PCICODFN_00948 1e-152 purD 6.3.4.13 F Belongs to the GARS family
PCICODFN_00949 2.5e-233 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PCICODFN_00950 5.2e-75 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PCICODFN_00951 2.4e-139 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PCICODFN_00952 2.1e-226 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PCICODFN_00953 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PCICODFN_00954 6.8e-103 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PCICODFN_00955 2.2e-30 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PCICODFN_00956 2.2e-96 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PCICODFN_00957 2.4e-131 ylbL T Belongs to the peptidase S16 family
PCICODFN_00958 4e-49 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PCICODFN_00959 7.2e-74 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PCICODFN_00960 1.1e-17 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PCICODFN_00961 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PCICODFN_00962 1.6e-102 ftsW D Belongs to the SEDS family
PCICODFN_00963 1.8e-28 S Phage gp6-like head-tail connector protein
PCICODFN_00964 3.1e-98
PCICODFN_00965 4e-08 S Domain of unknown function (DUF4355)
PCICODFN_00968 9.5e-17 S head morphogenesis protein, SPP1 gp7 family
PCICODFN_00969 5.9e-187 mtnE 2.6.1.83 E Aminotransferase
PCICODFN_00970 1.3e-81 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PCICODFN_00971 1.3e-66 S Protein of unknown function (DUF1440)
PCICODFN_00972 7.7e-41 S Iron-sulfur cluster assembly protein
PCICODFN_00973 3.3e-113 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PCICODFN_00974 5.9e-75 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PCICODFN_00975 5.1e-207 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCICODFN_00976 5.6e-153 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PCICODFN_00977 4e-64 G Xylose isomerase domain protein TIM barrel
PCICODFN_00978 1.1e-53 ndk 2.7.4.6 F Belongs to the NDK family
PCICODFN_00979 6.5e-90 nanK GK ROK family
PCICODFN_00980 1.3e-127 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PCICODFN_00981 2.5e-92 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PCICODFN_00982 4.3e-75 K Helix-turn-helix domain, rpiR family
PCICODFN_00983 1.5e-56 yphA GM NAD dependent epimerase/dehydratase family
PCICODFN_00984 6.9e-217 yjeM E Amino Acid
PCICODFN_00986 1.6e-31 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCICODFN_00987 3.1e-233 tetP J elongation factor G
PCICODFN_00989 1.3e-10 tcdC
PCICODFN_00991 1.8e-106 L PLD-like domain
PCICODFN_00992 9.2e-50 L Transposase and inactivated derivatives IS30 family
PCICODFN_00993 2.5e-31 L Transposase
PCICODFN_00994 8.9e-96 K Transcriptional regulator
PCICODFN_00995 2.4e-206 arsR K DNA-binding transcription factor activity
PCICODFN_00996 8.2e-72 H ThiF family
PCICODFN_00997 3e-235 stp_1 EGP Major facilitator Superfamily
PCICODFN_00998 2.8e-102 tag 3.2.2.20 L Methyladenine glycosylase
PCICODFN_00999 3.5e-97 norB EGP Major Facilitator
PCICODFN_01002 2e-09 S Domain of unknown function (DUF4176)
PCICODFN_01004 4.8e-30
PCICODFN_01005 6.1e-24 S RelB antitoxin
PCICODFN_01006 1e-108
PCICODFN_01007 6.5e-102 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PCICODFN_01008 1.3e-246 gshR 1.8.1.7 C Glutathione reductase
PCICODFN_01009 9.3e-178 proV E ABC transporter, ATP-binding protein
PCICODFN_01010 1e-260 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PCICODFN_01011 6.3e-64 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
PCICODFN_01012 2.4e-36 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PCICODFN_01013 1.1e-136 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PCICODFN_01014 4.8e-83 srlA G PTS system enzyme II sorbitol-specific factor
PCICODFN_01015 4.5e-43 gutM K Glucitol operon activator protein (GutM)
PCICODFN_01016 1.3e-103 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
PCICODFN_01017 5.2e-110 IQ NAD dependent epimerase/dehydratase family
PCICODFN_01018 5.2e-162 ytbD EGP Major facilitator Superfamily
PCICODFN_01019 3e-98 fabK 1.3.1.9 S Nitronate monooxygenase
PCICODFN_01020 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PCICODFN_01022 2.8e-266 fbp 3.1.3.11 G phosphatase activity
PCICODFN_01023 1.4e-70 xerD L Phage integrase, N-terminal SAM-like domain
PCICODFN_01027 2.5e-15 M domain protein
PCICODFN_01029 1.6e-22 agrA KT Response regulator of the LytR AlgR family
PCICODFN_01030 1.8e-43 2.7.13.3 T protein histidine kinase activity
PCICODFN_01031 0.0 pepN 3.4.11.2 E aminopeptidase
PCICODFN_01032 1.1e-35
PCICODFN_01034 2.9e-124 D CobQ CobB MinD ParA nucleotide binding domain protein
PCICODFN_01035 1.4e-12 bglG K antiterminator
PCICODFN_01036 3.2e-84 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PCICODFN_01037 1.1e-140 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PCICODFN_01038 1.9e-37 S Replication initiator protein A (RepA) N-terminus
PCICODFN_01039 9.4e-109 L Initiator Replication protein
PCICODFN_01040 6.1e-08 yokH G regulation of fungal-type cell wall biogenesis
PCICODFN_01042 6.5e-12 L PLD-like domain
PCICODFN_01043 3.5e-23 L PLD-like domain
PCICODFN_01044 7.6e-55 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PCICODFN_01045 6.2e-48 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PCICODFN_01046 4e-31 tnp L MULE transposase domain
PCICODFN_01048 8.5e-64 V HNH endonuclease
PCICODFN_01049 3.1e-23 tnp L MULE transposase domain
PCICODFN_01050 2.5e-50 tnp L MULE transposase domain
PCICODFN_01051 3.1e-130 3.6.1.13, 3.6.1.55 F NUDIX domain
PCICODFN_01052 6.2e-271 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PCICODFN_01053 2.4e-07 pncA Q Isochorismatase family
PCICODFN_01054 2.1e-190 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PCICODFN_01055 2.7e-242 lysP E amino acid
PCICODFN_01056 2.3e-69 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PCICODFN_01057 8.6e-272 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PCICODFN_01058 9.2e-14 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PCICODFN_01059 3.2e-57 lssY 3.6.1.27 I phosphatidate phosphatase activity
PCICODFN_01060 7.6e-83 lysR5 K LysR substrate binding domain
PCICODFN_01061 2e-86 mesE M Transport protein ComB
PCICODFN_01062 4.3e-46 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PCICODFN_01063 7.9e-206 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PCICODFN_01066 4.3e-56 K LytTr DNA-binding domain
PCICODFN_01067 4.7e-52 2.7.13.3 T GHKL domain
PCICODFN_01073 3.4e-149 cbiO2 P ABC transporter
PCICODFN_01074 1.3e-156 P ABC transporter
PCICODFN_01075 4.8e-132 cbiQ P Cobalt transport protein
PCICODFN_01076 2.2e-89 2.7.7.65 T phosphorelay sensor kinase activity
PCICODFN_01077 9.2e-183 L Probable transposase
PCICODFN_01078 1.8e-61 M Cna protein B-type domain
PCICODFN_01079 4.3e-258 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PCICODFN_01080 4.6e-79
PCICODFN_01081 7.5e-49 L Transposase
PCICODFN_01082 3.9e-156 L Transposase
PCICODFN_01083 1.4e-10 S Protein of unknown function (DUF3021)
PCICODFN_01084 4.8e-23 K COG3279 Response regulator of the LytR AlgR family
PCICODFN_01085 0.0 L MobA MobL family protein
PCICODFN_01086 5.5e-27
PCICODFN_01087 6.8e-41
PCICODFN_01088 9.2e-116 S protein conserved in bacteria
PCICODFN_01089 1.2e-25
PCICODFN_01090 1.1e-39 relB L Addiction module antitoxin, RelB DinJ family
PCICODFN_01091 6.4e-54 S Fic/DOC family
PCICODFN_01092 5.1e-08
PCICODFN_01098 3.6e-07
PCICODFN_01099 2.3e-263 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PCICODFN_01100 1.7e-54 rplI J Binds to the 23S rRNA
PCICODFN_01101 1.3e-204 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PCICODFN_01102 5.3e-64 C FMN binding
PCICODFN_01103 7.4e-231 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PCICODFN_01105 8.7e-157 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PCICODFN_01106 3.5e-59 ykhA 3.1.2.20 I Thioesterase superfamily
PCICODFN_01107 5.6e-10 S CAAX protease self-immunity
PCICODFN_01108 2.8e-81 S Belongs to the UPF0246 family
PCICODFN_01109 1.6e-100 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PCICODFN_01110 4.6e-128 yxjG 2.1.1.14 E Cobalamin-independent synthase, Catalytic domain
PCICODFN_01111 3.7e-74 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PCICODFN_01112 4.5e-196 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PCICODFN_01113 3.8e-161 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PCICODFN_01114 2.2e-56 3.1.3.48 K Transcriptional regulator
PCICODFN_01115 1.2e-197 1.3.5.4 C FMN_bind
PCICODFN_01116 2.9e-117 pepL 3.4.11.5 E Releases the N-terminal proline from various substrates
PCICODFN_01117 1.6e-201 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PCICODFN_01118 8.6e-141 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PCICODFN_01119 4.3e-80 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PCICODFN_01120 1.5e-133 glpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PCICODFN_01121 5.6e-150 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PCICODFN_01122 6.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PCICODFN_01123 1.9e-21 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PCICODFN_01124 1.3e-252 ctpA 3.6.3.54 P P-type ATPase
PCICODFN_01125 6.5e-66 pgm3 G phosphoglycerate mutase family
PCICODFN_01126 5.1e-57 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PCICODFN_01127 1.1e-85 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PCICODFN_01128 1.2e-218 yifK E Amino acid permease
PCICODFN_01129 1.1e-202 oppA E ABC transporter, substratebinding protein
PCICODFN_01130 7.9e-142 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCICODFN_01131 4.4e-170 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCICODFN_01132 7.4e-181 oppD P Belongs to the ABC transporter superfamily
PCICODFN_01133 3.7e-155 oppF P Belongs to the ABC transporter superfamily
PCICODFN_01134 1.2e-15 psiE S Phosphate-starvation-inducible E
PCICODFN_01135 2.2e-209 mmuP E amino acid
PCICODFN_01136 7.6e-113 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PCICODFN_01137 4.5e-39 K LytTr DNA-binding domain
PCICODFN_01138 2.5e-16 S Protein of unknown function (DUF3021)
PCICODFN_01139 1.2e-150 yfeX P Peroxidase
PCICODFN_01140 1.4e-30 tetR K Transcriptional regulator C-terminal region
PCICODFN_01141 3.1e-47 S Short repeat of unknown function (DUF308)
PCICODFN_01142 6.2e-53 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PCICODFN_01143 8.1e-163 oxlT P Major Facilitator Superfamily
PCICODFN_01144 2e-67 ybbL S ABC transporter
PCICODFN_01145 1.9e-101 ybbM S Uncharacterised protein family (UPF0014)
PCICODFN_01146 4.2e-43 ytcD K HxlR-like helix-turn-helix
PCICODFN_01147 6.9e-121 ytbE S reductase
PCICODFN_01148 7.5e-72 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCICODFN_01150 6.4e-96 XK27_06785 V ABC transporter, ATP-binding protein
PCICODFN_01151 2.5e-254 XK27_06780 V ABC transporter permease
PCICODFN_01153 5.1e-42 wecD K Acetyltransferase GNAT Family
PCICODFN_01154 3.9e-47 hmpT S ECF-type riboflavin transporter, S component
PCICODFN_01155 2.1e-69 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PCICODFN_01156 1.7e-09 yvaZ S Protein of unknown function (DUF1648)
PCICODFN_01157 1.7e-111 dat 2.6.1.21 EH PFAM aminotransferase, class IV
PCICODFN_01158 2.6e-285 pepO 3.4.24.71 O Peptidase family M13
PCICODFN_01159 7.7e-44 thiT S Thiamine transporter protein (Thia_YuaJ)
PCICODFN_01160 6.9e-54 K Transcriptional regulator C-terminal region
PCICODFN_01163 1.1e-08
PCICODFN_01165 1e-76 S DNA primase
PCICODFN_01166 2.4e-43 L Bifunctional DNA primase/polymerase, N-terminal
PCICODFN_01167 6.7e-15
PCICODFN_01172 6.8e-39 K COG3617 Prophage antirepressor
PCICODFN_01174 2.4e-08 S Helix-turn-helix domain
PCICODFN_01175 1.4e-24 K Cro/C1-type HTH DNA-binding domain
PCICODFN_01176 1.2e-123 sip L Belongs to the 'phage' integrase family
PCICODFN_01177 1.6e-55 jag S R3H domain protein
PCICODFN_01178 1.5e-56 ohrR K helix_turn_helix multiple antibiotic resistance protein
PCICODFN_01179 2e-31 azlD S Branched-chain amino acid transport protein (AzlD)
PCICODFN_01180 5.1e-77 azlC E branched-chain amino acid
PCICODFN_01181 9.3e-59 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PCICODFN_01182 7.2e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PCICODFN_01183 5.2e-293 lai 4.2.1.53 S Myosin-crossreactive antigen
PCICODFN_01184 3.5e-33 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PCICODFN_01185 8.2e-194 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PCICODFN_01186 4.1e-75 XK27_02070 S Nitroreductase family
PCICODFN_01187 3.7e-111 endA F DNA RNA non-specific endonuclease
PCICODFN_01189 3.2e-208 brnQ U Component of the transport system for branched-chain amino acids
PCICODFN_01190 1.7e-61 K Bacterial regulatory proteins, tetR family
PCICODFN_01191 1e-112 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PCICODFN_01192 2e-151 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PCICODFN_01193 9.5e-69 dhaL 2.7.1.121 S Dak2
PCICODFN_01194 4e-49 dhaM 2.7.1.121 S PTS system fructose IIA component
PCICODFN_01195 8.4e-104 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PCICODFN_01196 7.5e-177 yjcE P Sodium proton antiporter
PCICODFN_01197 2e-209 mtlR K Mga helix-turn-helix domain
PCICODFN_01198 1.5e-301 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PCICODFN_01199 4.7e-188 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PCICODFN_01200 3.2e-29 ponA V the current gene model (or a revised gene model) may contain a frame shift
PCICODFN_01201 4.5e-102 tcyB E ABC transporter
PCICODFN_01202 3.5e-100 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PCICODFN_01203 5.7e-96 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PCICODFN_01204 1.6e-38 K Transcriptional regulator
PCICODFN_01205 2.2e-107 terC P Integral membrane protein TerC family
PCICODFN_01206 4.2e-261 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PCICODFN_01207 2.8e-65 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCICODFN_01208 6.4e-186 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PCICODFN_01209 1.1e-41 gntR1 K Transcriptional regulator, GntR family
PCICODFN_01210 8e-96 V ABC transporter, ATP-binding protein
PCICODFN_01211 2.5e-08
PCICODFN_01212 1.1e-39 ybjQ S Belongs to the UPF0145 family
PCICODFN_01213 4.7e-158 manA 5.3.1.8 G mannose-6-phosphate isomerase
PCICODFN_01214 6.6e-97 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PCICODFN_01215 4e-157 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PCICODFN_01216 1.8e-141 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCICODFN_01217 3.7e-34
PCICODFN_01218 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PCICODFN_01219 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PCICODFN_01220 2.3e-63 srtA 3.4.22.70 M sortase family
PCICODFN_01222 8.9e-72 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PCICODFN_01223 7.9e-62 yvdD 3.2.2.10 S Possible lysine decarboxylase
PCICODFN_01224 0.0 pacL 3.6.3.8 P P-type ATPase
PCICODFN_01225 1.5e-105 3.1.4.46 C phosphodiesterase
PCICODFN_01226 4.1e-127 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PCICODFN_01227 1.1e-101 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PCICODFN_01228 3.7e-82 noc K Belongs to the ParB family
PCICODFN_01229 6.5e-118 soj D Sporulation initiation inhibitor
PCICODFN_01230 1.4e-108 spo0J K Belongs to the ParB family
PCICODFN_01231 1.8e-24 yyzM S Bacterial protein of unknown function (DUF951)
PCICODFN_01232 2.4e-190 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PCICODFN_01233 5.5e-53 XK27_01040 S Protein of unknown function (DUF1129)
PCICODFN_01234 1.8e-94 S Bacterial membrane protein, YfhO
PCICODFN_01235 5e-51 I Alpha/beta hydrolase family
PCICODFN_01236 1.3e-40
PCICODFN_01237 5.1e-103 psaA P Belongs to the bacterial solute-binding protein 9 family
PCICODFN_01238 1e-98 fhuC P ABC transporter
PCICODFN_01239 2.8e-95 znuB U ABC 3 transport family
PCICODFN_01240 8.6e-56 S ECF transporter, substrate-specific component
PCICODFN_01241 1.7e-100 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PCICODFN_01242 9.8e-90 S NADPH-dependent FMN reductase
PCICODFN_01243 1.2e-27 yraB K transcriptional regulator
PCICODFN_01244 2.2e-66 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PCICODFN_01246 3.4e-154 EGP Major facilitator Superfamily
PCICODFN_01247 3.3e-57 S Haloacid dehalogenase-like hydrolase
PCICODFN_01248 1.3e-87 yvyE 3.4.13.9 S YigZ family
PCICODFN_01249 7.3e-38 S CAAX protease self-immunity
PCICODFN_01250 1.3e-116 cps1D M Domain of unknown function (DUF4422)
PCICODFN_01251 1.7e-62 S Glycosyltransferase like family 2
PCICODFN_01252 1.9e-142 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PCICODFN_01253 4.2e-101 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PCICODFN_01254 3.6e-180 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PCICODFN_01255 2.1e-130 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PCICODFN_01256 1.6e-117 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
PCICODFN_01257 9.8e-27 S zinc-ribbon domain
PCICODFN_01258 4.9e-79 S response to antibiotic
PCICODFN_01259 4.8e-144 L AAA ATPase domain
PCICODFN_01260 5.9e-114 3.6.4.12 L UvrD/REP helicase N-terminal domain
PCICODFN_01261 4.6e-92 M Glycosyl transferase family 8
PCICODFN_01262 4.5e-37 S COG0463 Glycosyltransferases involved in cell wall biogenesis
PCICODFN_01263 1.9e-90
PCICODFN_01264 4.5e-28 M family 8
PCICODFN_01266 1.2e-67 S Polysaccharide pyruvyl transferase
PCICODFN_01267 4.2e-115 cps2J S Polysaccharide biosynthesis protein
PCICODFN_01269 3e-73 epsB M biosynthesis protein
PCICODFN_01270 1.2e-81 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PCICODFN_01271 8.6e-110 ywqE 3.1.3.48 GM PHP domain protein
PCICODFN_01272 3.7e-126 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PCICODFN_01273 8.5e-90 rfbP M Bacterial sugar transferase
PCICODFN_01274 1.8e-116 M Core-2/I-Branching enzyme
PCICODFN_01275 1.1e-193 glf 5.4.99.9 M UDP-galactopyranose mutase
PCICODFN_01276 8.5e-188 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PCICODFN_01277 6.7e-70 rny D Peptidase family M23
PCICODFN_01279 5.1e-138 tetA EGP Major facilitator Superfamily
PCICODFN_01280 1.8e-32 yvdC S MazG nucleotide pyrophosphohydrolase domain
PCICODFN_01281 2.1e-213 yjeM E Amino Acid
PCICODFN_01282 2.8e-189 glnPH2 P ABC transporter permease
PCICODFN_01283 2.3e-112 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PCICODFN_01284 3.5e-42 E lipolytic protein G-D-S-L family
PCICODFN_01285 2.3e-133 coaA 2.7.1.33 F Pantothenic acid kinase
PCICODFN_01286 1e-274 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PCICODFN_01287 8.3e-48 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PCICODFN_01289 1.8e-14
PCICODFN_01290 3e-87 S Haloacid dehalogenase-like hydrolase
PCICODFN_01291 5.9e-39 blpT
PCICODFN_01292 6.6e-19
PCICODFN_01293 7.2e-08
PCICODFN_01295 1.6e-136 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PCICODFN_01296 9.7e-24 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PCICODFN_01297 1.6e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PCICODFN_01298 1.9e-149 arlS 2.7.13.3 T Histidine kinase
PCICODFN_01299 1.3e-19
PCICODFN_01303 1.1e-116 S N-acetylmuramoyl-L-alanine amidase activity
PCICODFN_01304 4.2e-19 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PCICODFN_01306 1.3e-89 saeS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PCICODFN_01307 1.5e-76 K response regulator
PCICODFN_01308 2.5e-107 S Signal peptide protein, YSIRK family
PCICODFN_01309 1.6e-75 cylA V abc transporter atp-binding protein
PCICODFN_01310 8.5e-35
PCICODFN_01311 1.1e-169 repA S Replication initiator protein A
PCICODFN_01312 3e-55 hsdS_1 3.1.21.3 V Type I restriction modification DNA specificity domain
PCICODFN_01313 4.7e-131 L Belongs to the 'phage' integrase family
PCICODFN_01314 1.3e-44 hsdS-1 3.1.21.3 V Type I restriction modification DNA specificity domain
PCICODFN_01315 1.9e-118 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PCICODFN_01316 6.4e-44 XK27_01125 L PFAM IS66 Orf2 family protein
PCICODFN_01318 1.7e-47 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PCICODFN_01319 3.7e-16 XK27_08315 M Sulfatase
PCICODFN_01320 9.1e-168 XK27_08315 M Sulfatase
PCICODFN_01322 1.9e-167 mdtG EGP Major facilitator Superfamily
PCICODFN_01323 8.8e-253 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PCICODFN_01324 5.7e-84 treR K UTRA
PCICODFN_01325 3.3e-259 treB G phosphotransferase system
PCICODFN_01326 3.5e-63 3.1.3.73 G phosphoglycerate mutase
PCICODFN_01327 2.4e-82 pncA Q isochorismatase
PCICODFN_01328 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PCICODFN_01329 6.2e-102 ydhQ K UbiC transcription regulator-associated domain protein
PCICODFN_01330 1.7e-171 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PCICODFN_01331 1.3e-41 K Transcriptional regulator, HxlR family
PCICODFN_01332 3.7e-164 C Luciferase-like monooxygenase
PCICODFN_01333 2.2e-184 L Probable transposase
PCICODFN_01334 1.8e-67 1.5.1.38 S NADPH-dependent FMN reductase
PCICODFN_01335 1.5e-117 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PCICODFN_01336 1.1e-75 L haloacid dehalogenase-like hydrolase
PCICODFN_01337 5.2e-61 EG EamA-like transporter family
PCICODFN_01338 4e-118 K AI-2E family transporter
PCICODFN_01339 8.4e-173 malY 4.4.1.8 E Aminotransferase, class I
PCICODFN_01340 6e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PCICODFN_01342 1.9e-09
PCICODFN_01343 3.8e-99 V domain protein
PCICODFN_01344 1.3e-119 xth 3.1.11.2 L exodeoxyribonuclease III
PCICODFN_01345 1.3e-16
PCICODFN_01346 1.1e-104 azlC E AzlC protein
PCICODFN_01347 1.3e-38 azlD S branched-chain amino acid
PCICODFN_01348 1.8e-65 I alpha/beta hydrolase fold
PCICODFN_01349 1.2e-24
PCICODFN_01350 1.2e-58 3.6.1.27 I phosphatase
PCICODFN_01351 5.4e-23
PCICODFN_01352 3.8e-93 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PCICODFN_01353 8.3e-90 sirR K Helix-turn-helix diphteria tox regulatory element
PCICODFN_01354 3.1e-27 cspC K Cold shock protein
PCICODFN_01355 4.3e-82 thrE S Putative threonine/serine exporter
PCICODFN_01356 2.8e-49 S Threonine/Serine exporter, ThrE
PCICODFN_01357 8.1e-125 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PCICODFN_01358 1.4e-86 S Sucrose-6F-phosphate phosphohydrolase
PCICODFN_01359 7.2e-34 trxA O Belongs to the thioredoxin family
PCICODFN_01360 9.4e-22 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCICODFN_01361 8.8e-22 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCICODFN_01362 1.1e-65 degV S Uncharacterised protein, DegV family COG1307
PCICODFN_01364 8.1e-53 queT S QueT transporter
PCICODFN_01365 3.9e-34 XK27_01315 S Protein of unknown function (DUF2829)
PCICODFN_01366 8.4e-102 IQ Enoyl-(Acyl carrier protein) reductase
PCICODFN_01367 1e-111 argE 3.5.1.18 E Peptidase dimerisation domain
PCICODFN_01368 1.9e-174 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PCICODFN_01369 7.1e-95 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PCICODFN_01370 2.1e-85 S Alpha beta hydrolase
PCICODFN_01371 3.5e-43 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCICODFN_01372 6.2e-140 V MatE
PCICODFN_01373 1.4e-156 gmuE 2.7.1.2, 2.7.1.4 GK ROK family
PCICODFN_01374 2.6e-64 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCICODFN_01375 7.4e-97 V ABC transporter
PCICODFN_01376 2.8e-131 bacI V MacB-like periplasmic core domain
PCICODFN_01377 5.3e-74 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PCICODFN_01378 1.7e-26
PCICODFN_01379 2.1e-180 yhdP S Transporter associated domain
PCICODFN_01380 6e-79 ptp2 3.1.3.48 T Tyrosine phosphatase family
PCICODFN_01381 0.0 L Helicase C-terminal domain protein
PCICODFN_01382 9.6e-251 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PCICODFN_01383 2.2e-212 yfnA E Amino Acid
PCICODFN_01384 3.2e-53 zur P Belongs to the Fur family
PCICODFN_01386 2.2e-98
PCICODFN_01387 3.9e-08
PCICODFN_01388 1.3e-102 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PCICODFN_01389 6.6e-100 glnH ET ABC transporter
PCICODFN_01390 1.2e-85 gluC P ABC transporter permease
PCICODFN_01391 9.6e-78 glnP P ABC transporter permease
PCICODFN_01392 2.9e-182 steT E amino acid
PCICODFN_01393 6.5e-21 K Acetyltransferase (GNAT) domain
PCICODFN_01394 1.1e-146 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PCICODFN_01395 5.9e-54 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PCICODFN_01396 2.5e-78 K rpiR family
PCICODFN_01397 6.6e-176 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PCICODFN_01398 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PCICODFN_01399 5e-108 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PCICODFN_01400 1e-100 rplD J Forms part of the polypeptide exit tunnel
PCICODFN_01401 2.9e-39 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PCICODFN_01402 1.4e-142 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PCICODFN_01403 1e-44 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PCICODFN_01404 1.5e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PCICODFN_01405 5.2e-116 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PCICODFN_01406 6.2e-73 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PCICODFN_01407 9e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PCICODFN_01408 8e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PCICODFN_01409 5.1e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PCICODFN_01410 7e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PCICODFN_01411 1.3e-91 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PCICODFN_01412 4.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCICODFN_01413 2.5e-65 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PCICODFN_01414 3.2e-87 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PCICODFN_01415 9.6e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PCICODFN_01416 1.3e-82 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PCICODFN_01417 2.1e-22 rpmD J Ribosomal protein L30
PCICODFN_01418 1e-67 rplO J Binds to the 23S rRNA
PCICODFN_01419 4.4e-207 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PCICODFN_01420 4.4e-107 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PCICODFN_01421 4.8e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PCICODFN_01422 2.5e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PCICODFN_01423 4.4e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PCICODFN_01424 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PCICODFN_01425 1.3e-155 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCICODFN_01426 4.8e-53 rplQ J Ribosomal protein L17
PCICODFN_01427 1.8e-100 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCICODFN_01428 6.7e-111 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCICODFN_01429 2.8e-108 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCICODFN_01430 2.5e-125 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PCICODFN_01431 5.5e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PCICODFN_01432 1.1e-60 rpsI J Belongs to the universal ribosomal protein uS9 family
PCICODFN_01433 3.4e-23
PCICODFN_01434 8.9e-246 yjbQ P TrkA C-terminal domain protein
PCICODFN_01435 0.0 helD 3.6.4.12 L DNA helicase
PCICODFN_01436 3e-67 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PCICODFN_01437 1.5e-86 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PCICODFN_01438 5.9e-101 hrtB V ABC transporter permease
PCICODFN_01439 2e-35 ygfC K Bacterial regulatory proteins, tetR family
PCICODFN_01440 7e-85 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PCICODFN_01441 3e-278 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PCICODFN_01442 2.1e-36 M LysM domain protein
PCICODFN_01444 1.1e-113 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PCICODFN_01445 6.7e-97 sbcC L Putative exonuclease SbcCD, C subunit
PCICODFN_01446 7.6e-58 S LexA-binding, inner membrane-associated putative hydrolase
PCICODFN_01447 7.2e-53 perR P Belongs to the Fur family
PCICODFN_01448 3.2e-207 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PCICODFN_01449 4e-141 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PCICODFN_01450 2.5e-86 S (CBS) domain
PCICODFN_01451 6.2e-158 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PCICODFN_01452 6.5e-75 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PCICODFN_01453 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PCICODFN_01454 7.3e-140 yabM S Polysaccharide biosynthesis protein
PCICODFN_01455 3.6e-31 yabO J S4 domain protein
PCICODFN_01456 1.3e-21 divIC D Septum formation initiator
PCICODFN_01457 1.1e-40 yabR J RNA binding
PCICODFN_01458 5.5e-96 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PCICODFN_01459 1.5e-76 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PCICODFN_01460 3e-282 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PCICODFN_01461 2.4e-132 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PCICODFN_01462 1.6e-169 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PCICODFN_01463 5.1e-260 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PCICODFN_01464 5.1e-08
PCICODFN_01471 3.3e-148 manN G system, mannose fructose sorbose family IID component
PCICODFN_01472 7e-115 manY G PTS system
PCICODFN_01473 6e-148 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PCICODFN_01474 0.0 typA T GTP-binding protein TypA
PCICODFN_01475 9.7e-77 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PCICODFN_01476 1.7e-23 yktA S Belongs to the UPF0223 family
PCICODFN_01477 3.7e-32 1.1.1.27 C L-malate dehydrogenase activity
PCICODFN_01478 6.3e-86 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCICODFN_01479 1.6e-24
PCICODFN_01480 5e-23 ykzG S Belongs to the UPF0356 family
PCICODFN_01481 1.5e-300 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCICODFN_01482 2.3e-249 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PCICODFN_01483 3e-197 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PCICODFN_01484 6e-196 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PCICODFN_01485 1.4e-215 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PCICODFN_01486 5.2e-18 S Tetratricopeptide repeat
PCICODFN_01487 3.8e-267 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCICODFN_01488 5.3e-116 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PCICODFN_01489 1.6e-39 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PCICODFN_01490 1.8e-32 rpsT J Binds directly to 16S ribosomal RNA
PCICODFN_01491 3e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PCICODFN_01492 7e-198 yfnA E amino acid
PCICODFN_01493 5.7e-61 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
PCICODFN_01494 7.3e-114 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PCICODFN_01495 1.9e-57 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PCICODFN_01496 1.1e-26 ylqC S Belongs to the UPF0109 family
PCICODFN_01497 3.6e-42 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PCICODFN_01498 5e-204 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PCICODFN_01499 7e-40 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PCICODFN_01500 9.1e-149 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PCICODFN_01501 4.7e-211 smc D Required for chromosome condensation and partitioning
PCICODFN_01502 2.5e-100 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PCICODFN_01503 7e-26 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PCICODFN_01504 1.6e-140 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PCICODFN_01505 3.3e-246 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PCICODFN_01506 3.7e-238 yloV S DAK2 domain fusion protein YloV
PCICODFN_01507 4.5e-53 asp S Asp23 family, cell envelope-related function
PCICODFN_01508 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PCICODFN_01509 2.9e-58 thiN 2.7.6.2 H thiamine pyrophosphokinase
PCICODFN_01510 1.8e-111 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PCICODFN_01511 3.4e-191 KLT serine threonine protein kinase
PCICODFN_01512 3.3e-90 stp 3.1.3.16 T phosphatase
PCICODFN_01513 6.4e-153 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PCICODFN_01514 5.8e-140 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PCICODFN_01515 2.4e-288 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PCICODFN_01516 4.4e-121 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PCICODFN_01517 2.5e-21 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PCICODFN_01518 1.1e-102 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PCICODFN_01519 5.6e-94 2.7.1.89 M Phosphotransferase enzyme family
PCICODFN_01520 7.9e-26 arsC 1.20.4.1 P Belongs to the ArsC family
PCICODFN_01521 6.1e-187 rodA D Belongs to the SEDS family
PCICODFN_01522 1.8e-12 S Protein of unknown function (DUF2969)
PCICODFN_01523 1.2e-26 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PCICODFN_01524 3.4e-167 mbl D Cell shape determining protein MreB Mrl
PCICODFN_01525 9.3e-197 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PCICODFN_01526 4.1e-15 ywzB S Protein of unknown function (DUF1146)
PCICODFN_01527 3.9e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PCICODFN_01528 1.7e-236 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PCICODFN_01529 3e-141 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PCICODFN_01530 6.3e-266 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PCICODFN_01531 1.6e-57 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCICODFN_01532 2.4e-39 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PCICODFN_01533 1.8e-15 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCICODFN_01534 4.5e-97 atpB C it plays a direct role in the translocation of protons across the membrane
PCICODFN_01535 5e-100 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PCICODFN_01536 7.7e-135 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PCICODFN_01537 1.4e-89 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PCICODFN_01538 1e-177 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PCICODFN_01539 6.8e-86 tdk 2.7.1.21 F thymidine kinase
PCICODFN_01540 4.7e-220 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PCICODFN_01541 3.5e-110 cobQ S glutamine amidotransferase
PCICODFN_01542 7.7e-111 ampC V Beta-lactamase
PCICODFN_01543 1.5e-31
PCICODFN_01544 2.6e-119 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PCICODFN_01545 9.2e-206 glnP P ABC transporter
PCICODFN_01547 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PCICODFN_01548 1.2e-160 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PCICODFN_01549 1.5e-274 dnaK O Heat shock 70 kDa protein
PCICODFN_01550 4.2e-56 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PCICODFN_01551 1.4e-131 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PCICODFN_01552 2.5e-95 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PCICODFN_01553 2.7e-118 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PCICODFN_01554 1.3e-55 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PCICODFN_01555 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PCICODFN_01556 6.8e-26 ylxQ J ribosomal protein
PCICODFN_01557 1.4e-39 ylxR K Protein of unknown function (DUF448)
PCICODFN_01558 4.8e-170 nusA K Participates in both transcription termination and antitermination
PCICODFN_01559 8e-66 rimP J Required for maturation of 30S ribosomal subunits
PCICODFN_01560 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PCICODFN_01561 5.9e-260 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PCICODFN_01562 4.1e-157 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PCICODFN_01563 5.1e-102 cdsA 2.7.7.41 S Belongs to the CDS family
PCICODFN_01564 3.8e-105 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PCICODFN_01565 7.2e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PCICODFN_01566 6.3e-115 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PCICODFN_01567 2.7e-48 S Domain of unknown function (DUF956)
PCICODFN_01568 5.8e-37 ogt 2.1.1.63 H Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PCICODFN_01570 2e-247 glnA 6.3.1.2 E glutamine synthetase
PCICODFN_01571 1.3e-45 glnR K Transcriptional regulator
PCICODFN_01572 1.8e-205 ynbB 4.4.1.1 P aluminum resistance
PCICODFN_01573 1.9e-111 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PCICODFN_01574 9.7e-17 WQ51_02665 S Protein of unknown function (DUF3042)
PCICODFN_01575 8e-46 yqhL P Rhodanese-like protein
PCICODFN_01576 4.7e-158 glk 2.7.1.2 G Glucokinase
PCICODFN_01577 1.5e-25 yqgQ S Bacterial protein of unknown function (DUF910)
PCICODFN_01578 1.3e-69 gluP 3.4.21.105 S Peptidase, S54 family
PCICODFN_01579 1.6e-38 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PCICODFN_01580 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PCICODFN_01581 3e-19 D nuclear chromosome segregation
PCICODFN_01582 1.2e-74 yciQ P membrane protein (DUF2207)
PCICODFN_01583 5.4e-44 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PCICODFN_01584 1.8e-91 engB D Necessary for normal cell division and for the maintenance of normal septation
PCICODFN_01585 5.9e-27 yneF S UPF0154 protein
PCICODFN_01586 2.2e-30 ynzC S UPF0291 protein
PCICODFN_01587 7.2e-83 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PCICODFN_01588 2.7e-177 recN L May be involved in recombinational repair of damaged DNA
PCICODFN_01589 8.6e-49 argR K Regulates arginine biosynthesis genes
PCICODFN_01590 1.2e-120 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PCICODFN_01591 1.4e-82 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PCICODFN_01592 1.2e-16 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCICODFN_01593 2e-146 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCICODFN_01594 3e-103 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PCICODFN_01595 4.2e-36 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PCICODFN_01596 3.7e-46 yqhY S Asp23 family, cell envelope-related function
PCICODFN_01597 2.1e-94 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PCICODFN_01598 1.3e-41 dut S dUTPase
PCICODFN_01599 7.2e-117
PCICODFN_01600 7.3e-105
PCICODFN_01601 3.8e-93 yihY S Belongs to the UPF0761 family
PCICODFN_01602 6.2e-12 mltD CBM50 M Lysin motif
PCICODFN_01603 1.2e-152 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PCICODFN_01604 1.2e-143 map 3.4.11.18 E Methionine Aminopeptidase
PCICODFN_01605 5.1e-54 fld C Flavodoxin
PCICODFN_01606 8.7e-53 gtcA S Teichoic acid glycosylation protein
PCICODFN_01607 0.0 S Bacterial membrane protein YfhO
PCICODFN_01608 5.2e-120 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
PCICODFN_01609 1.7e-122 S Sulfite exporter TauE/SafE
PCICODFN_01610 2.4e-70 K Sugar-specific transcriptional regulator TrmB
PCICODFN_01611 1.6e-168 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PCICODFN_01612 1.1e-180 pepS E Thermophilic metalloprotease (M29)
PCICODFN_01613 4.3e-265 E Amino acid permease
PCICODFN_01614 4.9e-85 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PCICODFN_01615 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PCICODFN_01616 7.7e-79 galM 5.1.3.3 G Aldose 1-epimerase
PCICODFN_01617 4.3e-213 malT G Transporter, major facilitator family protein
PCICODFN_01618 9.4e-101 malR K Transcriptional regulator, LacI family
PCICODFN_01619 2.3e-279 kup P Transport of potassium into the cell
PCICODFN_01621 2e-20 S Domain of unknown function (DUF3284)
PCICODFN_01622 5.2e-160 yfmL L DEAD DEAH box helicase
PCICODFN_01623 1.6e-127 mocA S Oxidoreductase
PCICODFN_01624 2e-24 S Domain of unknown function (DUF4828)
PCICODFN_01625 6.2e-175 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PCICODFN_01626 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PCICODFN_01627 2.1e-194 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PCICODFN_01628 6.9e-119 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PCICODFN_01629 4.2e-161 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PCICODFN_01630 2.4e-265 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PCICODFN_01631 8.5e-222 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PCICODFN_01632 1.1e-41 O ADP-ribosylglycohydrolase
PCICODFN_01633 5.5e-221 gdhA 1.4.1.4 E Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PCICODFN_01634 2.9e-209 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PCICODFN_01635 1.3e-34 K GNAT family
PCICODFN_01636 1.7e-40
PCICODFN_01638 5.5e-160 mgtE P Acts as a magnesium transporter
PCICODFN_01639 1.9e-94 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PCICODFN_01640 7.6e-117 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PCICODFN_01641 2.5e-94 yjbM 2.7.6.5 S RelA SpoT domain protein
PCICODFN_01642 2.7e-259 topB 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PCICODFN_01643 9.1e-34 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PCICODFN_01644 9.7e-194 pbuX F xanthine permease
PCICODFN_01645 3.3e-74 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PCICODFN_01646 4.1e-60 acmC 3.2.1.96 NU mannosyl-glycoprotein
PCICODFN_01647 9.4e-64 S ECF transporter, substrate-specific component
PCICODFN_01648 3.3e-127 mleP S Sodium Bile acid symporter family
PCICODFN_01649 1.7e-248 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PCICODFN_01650 6.2e-72 mleR K LysR family
PCICODFN_01651 1.1e-56 K transcriptional
PCICODFN_01652 3.4e-41 K Bacterial regulatory proteins, tetR family
PCICODFN_01653 6.1e-60 T Belongs to the universal stress protein A family
PCICODFN_01654 1.2e-44 K Copper transport repressor CopY TcrY
PCICODFN_01655 3.5e-230 3.2.1.18 GH33 M Rib/alpha-like repeat
PCICODFN_01657 1.8e-95 ypuA S Protein of unknown function (DUF1002)
PCICODFN_01658 8.4e-60 dedA 3.1.3.1 S SNARE associated Golgi protein
PCICODFN_01659 3e-162 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCICODFN_01660 1.1e-34 yncA 2.3.1.79 S Maltose acetyltransferase
PCICODFN_01661 6.9e-206 yflS P Sodium:sulfate symporter transmembrane region
PCICODFN_01662 1.2e-199 frdC 1.3.5.4 C FAD binding domain
PCICODFN_01663 3.3e-237 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PCICODFN_01664 2e-14 ybaN S Protein of unknown function (DUF454)
PCICODFN_01665 8.2e-177 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PCICODFN_01666 2.6e-57 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PCICODFN_01667 3.6e-96 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCICODFN_01668 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PCICODFN_01669 1.1e-71 ywlG S Belongs to the UPF0340 family
PCICODFN_01670 7.3e-67 S Acetyltransferase (GNAT) domain
PCICODFN_01671 1.1e-47 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PCICODFN_01673 8e-174 spoVK O PFAM ATPase family associated with various cellular activities (AAA)
PCICODFN_01674 3e-230 yfjM S Protein of unknown function DUF262
PCICODFN_01675 3.6e-71 S Domain of unknown function (DUF3841)
PCICODFN_01676 1.6e-56 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
PCICODFN_01677 4.2e-302 hsdM 2.1.1.72 V Type I restriction-modification system
PCICODFN_01678 1.4e-208 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCICODFN_01679 3.4e-146 yegS 2.7.1.107 G Lipid kinase
PCICODFN_01680 1.9e-256 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCICODFN_01681 3.1e-233 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PCICODFN_01682 7.6e-38 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCICODFN_01683 1.2e-160 camS S sex pheromone
PCICODFN_01684 3.9e-279 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PCICODFN_01685 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PCICODFN_01686 4.2e-145 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PCICODFN_01694 3e-124 yvgN C Aldo keto reductase
PCICODFN_01695 1.7e-122 yvgN C Aldo keto reductase
PCICODFN_01696 2.2e-70 K DeoR C terminal sensor domain
PCICODFN_01697 1.1e-46 pts36A 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PCICODFN_01698 3.4e-41 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PCICODFN_01699 1.2e-216 pts36C G PTS system sugar-specific permease component
PCICODFN_01701 1.1e-103 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
PCICODFN_01703 6.2e-29 S COG NOG19168 non supervised orthologous group
PCICODFN_01704 1.1e-189 XK27_11280 S Psort location CytoplasmicMembrane, score
PCICODFN_01705 2.7e-14 L Plasmid pRiA4b ORF-3-like protein
PCICODFN_01706 1.5e-105 L Belongs to the 'phage' integrase family
PCICODFN_01707 5.7e-23 3.1.21.3 V Type I restriction modification DNA specificity domain
PCICODFN_01708 8.6e-60 hsdM 2.1.1.72 V type I restriction-modification system
PCICODFN_01710 2.9e-56 sthIM 2.1.1.72 L DNA methylase
PCICODFN_01711 6.3e-109 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
PCICODFN_01712 1.2e-57 sthIM 2.1.1.72 L DNA methylase
PCICODFN_01713 5.1e-56 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
PCICODFN_01714 7.7e-115 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
PCICODFN_01715 8.5e-56 sthIM 2.1.1.72 L DNA methylase
PCICODFN_01716 3.1e-116 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
PCICODFN_01717 4e-260 res_1 3.1.21.5 L Type III restriction enzyme, res subunit
PCICODFN_01718 4.6e-16
PCICODFN_01719 4.9e-24
PCICODFN_01720 2e-48 L HNH endonuclease
PCICODFN_01723 3.5e-122 potE2 E amino acid
PCICODFN_01724 2.4e-26 potE2 E amino acid
PCICODFN_01725 4.8e-71 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PCICODFN_01726 2.3e-69 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PCICODFN_01727 7.2e-117 queH 1.17.99.6, 3.1.26.4 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PCICODFN_01728 1.9e-57 racA K Domain of unknown function (DUF1836)
PCICODFN_01729 9.1e-81 yitS S EDD domain protein, DegV family
PCICODFN_01730 1.7e-46 yjaB_1 K Acetyltransferase (GNAT) domain
PCICODFN_01733 1e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PCICODFN_01734 0.0 O Belongs to the peptidase S8 family
PCICODFN_01735 4.1e-53 1.14.12.17 C Oxidoreductase NAD-binding domain
PCICODFN_01736 2.5e-58 tlpA2 L Transposase IS200 like
PCICODFN_01737 1.1e-157 L transposase, IS605 OrfB family
PCICODFN_01738 4.6e-84 dps P Ferritin-like domain
PCICODFN_01739 1.1e-124 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PCICODFN_01740 9.6e-44 L hmm pf00665
PCICODFN_01741 5e-18 tnp
PCICODFN_01742 8.7e-31 tnp L Transposase IS66 family
PCICODFN_01743 1.7e-32 P Heavy-metal-associated domain
PCICODFN_01744 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PCICODFN_01745 1.3e-20 L PFAM transposase IS3 IS911 family protein
PCICODFN_01746 8.1e-37 L Integrase core domain
PCICODFN_01747 2.4e-35 L Integrase core domain
PCICODFN_01748 7.5e-129 EGP Major Facilitator Superfamily
PCICODFN_01749 1.4e-98 EGP Major Facilitator Superfamily
PCICODFN_01750 7.5e-73 K Transcriptional regulator, LysR family
PCICODFN_01751 4.7e-138 G Xylose isomerase-like TIM barrel
PCICODFN_01752 4.6e-117 IQ Enoyl-(Acyl carrier protein) reductase
PCICODFN_01753 2.3e-216 1.3.5.4 C FAD binding domain
PCICODFN_01754 6.5e-138 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PCICODFN_01755 1e-70 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PCICODFN_01756 4.2e-142 xerS L Phage integrase family
PCICODFN_01760 1.1e-20 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PCICODFN_01761 2.5e-82 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PCICODFN_01762 8.2e-13 ptp3 3.1.3.48 T Tyrosine phosphatase family
PCICODFN_01763 8.7e-39 ptp3 3.1.3.48 T Tyrosine phosphatase family
PCICODFN_01764 2.4e-75 desR K helix_turn_helix, Lux Regulon
PCICODFN_01765 8.4e-58 salK 2.7.13.3 T Histidine kinase
PCICODFN_01766 3.2e-53 yvfS V ABC-2 type transporter
PCICODFN_01767 3.4e-78 yvfR V ABC transporter
PCICODFN_01768 1.2e-99 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PCICODFN_01769 1.9e-78 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PCICODFN_01770 2.7e-30
PCICODFN_01771 3.7e-16
PCICODFN_01772 3.6e-112 rssA S Phospholipase, patatin family
PCICODFN_01773 1.5e-136 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCICODFN_01774 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PCICODFN_01775 5.5e-45 S VIT family
PCICODFN_01776 4.2e-240 sufB O assembly protein SufB
PCICODFN_01777 4.9e-41 nifU C SUF system FeS assembly protein, NifU family
PCICODFN_01778 3.7e-147 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PCICODFN_01779 4.6e-145 sufD O FeS assembly protein SufD
PCICODFN_01780 1.1e-115 sufC O FeS assembly ATPase SufC
PCICODFN_01781 1.7e-224 E ABC transporter, substratebinding protein
PCICODFN_01782 2.5e-255 V Type II restriction enzyme, methylase subunits
PCICODFN_01783 5.6e-136 pfoS S Phosphotransferase system, EIIC
PCICODFN_01784 6.1e-116 ldhA 1.1.1.28 CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PCICODFN_01785 6.9e-30 yqkB S Belongs to the HesB IscA family
PCICODFN_01786 2.3e-65 yxkH G Polysaccharide deacetylase
PCICODFN_01787 1.1e-07
PCICODFN_01788 2.9e-53 K LysR substrate binding domain
PCICODFN_01789 2e-122 MA20_14895 S Conserved hypothetical protein 698
PCICODFN_01790 1.1e-199 nupG F Nucleoside
PCICODFN_01791 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PCICODFN_01792 2.2e-49 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PCICODFN_01793 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PCICODFN_01794 2.1e-204 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PCICODFN_01795 3.9e-159 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PCICODFN_01796 9e-20 yaaA S S4 domain protein YaaA
PCICODFN_01797 9.3e-153 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PCICODFN_01798 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCICODFN_01799 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCICODFN_01800 4.8e-45 rpsF J Binds together with S18 to 16S ribosomal RNA
PCICODFN_01801 3.3e-63 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PCICODFN_01802 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PCICODFN_01803 2.5e-110 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PCICODFN_01804 7.3e-117 S Glycosyl transferase family 2
PCICODFN_01805 7.4e-64 D peptidase
PCICODFN_01806 0.0 asnB 6.3.5.4 E Asparagine synthase
PCICODFN_01807 1.3e-46 yiiE S Protein of unknown function (DUF1211)
PCICODFN_01808 7.8e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PCICODFN_01809 6.3e-247 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PCICODFN_01810 3.6e-17 yneR
PCICODFN_01811 8.7e-231 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PCICODFN_01812 4.9e-224 yxbA 6.3.1.12 S ATP-grasp enzyme
PCICODFN_01813 2.4e-106 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PCICODFN_01814 9.9e-153 mdtG EGP Major facilitator Superfamily
PCICODFN_01815 1e-14 yobS K transcriptional regulator
PCICODFN_01816 2.8e-109 glcU U sugar transport
PCICODFN_01817 3.4e-170 yjjP S Putative threonine/serine exporter
PCICODFN_01818 1.4e-69 2.3.1.178 J Acetyltransferase (GNAT) domain
PCICODFN_01819 3.7e-96 yicL EG EamA-like transporter family
PCICODFN_01820 6e-223 pepF E Oligopeptidase F
PCICODFN_01821 1.5e-108 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PCICODFN_01822 4.9e-178 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PCICODFN_01823 6.6e-140 gldA 1.1.1.6 C Iron-containing alcohol dehydrogenase
PCICODFN_01824 4.1e-61 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PCICODFN_01825 4e-23 relB L RelB antitoxin
PCICODFN_01827 2.9e-172 S Putative peptidoglycan binding domain
PCICODFN_01828 1.2e-31 K Transcriptional regulator, MarR family
PCICODFN_01829 5.3e-216 XK27_09600 V ABC transporter, ATP-binding protein
PCICODFN_01830 1.1e-229 V ABC transporter transmembrane region
PCICODFN_01832 5.3e-93 S Domain of unknown function DUF87
PCICODFN_01834 7.9e-106 yxeH S hydrolase
PCICODFN_01835 9e-114 K response regulator
PCICODFN_01836 1.1e-272 vicK 2.7.13.3 T Histidine kinase
PCICODFN_01837 4.6e-103 yycH S YycH protein
PCICODFN_01838 5.6e-80 yycI S YycH protein
PCICODFN_01839 1.8e-30 yyaQ S YjbR
PCICODFN_01840 1.3e-116 vicX 3.1.26.11 S domain protein
PCICODFN_01841 3.7e-145 htrA 3.4.21.107 O serine protease
PCICODFN_01842 1.5e-72 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PCICODFN_01843 4.4e-40 1.6.5.2 GM NAD(P)H-binding
PCICODFN_01844 3.3e-25 K MarR family transcriptional regulator
PCICODFN_01845 5.9e-88 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PCICODFN_01846 1.7e-46 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PCICODFN_01847 3.6e-207 G glycerol-3-phosphate transporter
PCICODFN_01848 5.9e-30 L Helix-turn-helix domain
PCICODFN_01849 1e-20 L HTH-like domain
PCICODFN_01850 8e-37 L Integrase core domain
PCICODFN_01851 2.1e-71 L PFAM transposase IS200-family protein
PCICODFN_01852 1.1e-216 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PCICODFN_01853 7.2e-149 mepA V MATE efflux family protein
PCICODFN_01854 7.3e-150 lsa S ABC transporter
PCICODFN_01855 4e-83 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PCICODFN_01856 6.8e-109 puuD S peptidase C26
PCICODFN_01857 9.8e-202 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PCICODFN_01858 1.1e-25
PCICODFN_01859 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
PCICODFN_01860 2.9e-60 uspA T Universal stress protein family
PCICODFN_01862 4.7e-210 glnP P ABC transporter
PCICODFN_01863 1.2e-167 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PCICODFN_01872 2.1e-07
PCICODFN_01882 7.4e-177 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PCICODFN_01883 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCICODFN_01884 2.4e-192 cycA E Amino acid permease
PCICODFN_01885 7e-186 ytgP S Polysaccharide biosynthesis protein
PCICODFN_01886 2.8e-62 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PCICODFN_01887 1.1e-81 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PCICODFN_01888 8.7e-193 pepV 3.5.1.18 E dipeptidase PepV
PCICODFN_01889 6.4e-63 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
PCICODFN_01890 1.6e-79 L Type III restriction enzyme, res subunit
PCICODFN_01891 0.0 L Type III restriction enzyme, res subunit
PCICODFN_01893 4e-36
PCICODFN_01894 2.6e-66 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PCICODFN_01895 4.2e-61 marR K Transcriptional regulator, MarR family
PCICODFN_01896 7.1e-101 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PCICODFN_01897 2.2e-27 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PCICODFN_01898 6.5e-104 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PCICODFN_01899 6.5e-99 IQ reductase
PCICODFN_01900 1.8e-194 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PCICODFN_01901 7.9e-47 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PCICODFN_01902 1.5e-63 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PCICODFN_01903 9.3e-216 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PCICODFN_01904 2.7e-125 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PCICODFN_01905 2.3e-102 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PCICODFN_01906 5.5e-109 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PCICODFN_01907 2.8e-229 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PCICODFN_01908 3.1e-240 pgi 5.3.1.9 G Belongs to the GPI family
PCICODFN_01909 4.6e-302 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PCICODFN_01910 5.7e-119 gla U Major intrinsic protein
PCICODFN_01911 5.8e-45 ykuL S CBS domain
PCICODFN_01912 1.5e-60 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PCICODFN_01913 4.1e-177 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PCICODFN_01914 1.5e-86 ykuT M mechanosensitive ion channel
PCICODFN_01916 5e-285 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PCICODFN_01917 2e-21 yheA S Belongs to the UPF0342 family
PCICODFN_01918 5e-128 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PCICODFN_01919 6.6e-114 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PCICODFN_01921 5.4e-53 hit FG histidine triad
PCICODFN_01922 1.3e-94 ecsA V ABC transporter, ATP-binding protein
PCICODFN_01923 1.7e-69 ecsB U ABC transporter
PCICODFN_01924 1.6e-98 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PCICODFN_01925 7.9e-101 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PCICODFN_01926 4e-45 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PCICODFN_01927 2.3e-76 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PCICODFN_01928 3.8e-238 sftA D Belongs to the FtsK SpoIIIE SftA family
PCICODFN_01929 7.6e-223 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PCICODFN_01930 2.5e-61 phaJ I N-terminal half of MaoC dehydratase
PCICODFN_01931 6.7e-69 ybhL S Belongs to the BI1 family
PCICODFN_01932 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PCICODFN_01933 3.3e-107 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PCICODFN_01934 2.1e-50 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PCICODFN_01935 6.1e-66 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PCICODFN_01936 1.6e-79 dnaB L replication initiation and membrane attachment
PCICODFN_01937 2.2e-107 dnaI L Primosomal protein DnaI
PCICODFN_01938 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PCICODFN_01939 1.3e-79 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PCICODFN_01940 1.4e-24 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PCICODFN_01941 7.7e-53 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PCICODFN_01942 2.5e-71 yqeG S HAD phosphatase, family IIIA
PCICODFN_01943 7.9e-181 yqeH S Ribosome biogenesis GTPase YqeH
PCICODFN_01944 1e-29 yhbY J RNA-binding protein
PCICODFN_01945 2.7e-77 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PCICODFN_01946 7.2e-72 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PCICODFN_01947 1.5e-48 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PCICODFN_01948 5.5e-82 H Nodulation protein S (NodS)
PCICODFN_01949 1.3e-122 ylbM S Belongs to the UPF0348 family
PCICODFN_01950 2e-57 yceD S Uncharacterized ACR, COG1399
PCICODFN_01951 1.9e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PCICODFN_01952 8.8e-89 plsC 2.3.1.51 I Acyltransferase
PCICODFN_01953 1.1e-93 yabB 2.1.1.223 L Methyltransferase small domain
PCICODFN_01954 1.5e-27 yazA L GIY-YIG catalytic domain protein
PCICODFN_01955 1.9e-128 rpsB J Belongs to the universal ribosomal protein uS2 family
PCICODFN_01956 2.7e-128 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PCICODFN_01957 6.9e-37
PCICODFN_01958 3.4e-92 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PCICODFN_01959 1.8e-57 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PCICODFN_01960 2.7e-157 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PCICODFN_01961 1.2e-225 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PCICODFN_01962 4.7e-105 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PCICODFN_01964 3.1e-111 K response regulator

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)