ORF_ID e_value Gene_name EC_number CAZy COGs Description
PAEPIDIB_00001 9.7e-69 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAEPIDIB_00002 2.2e-109 pepE 3.4.13.21 E Alpha/beta hydrolase of unknown function (DUF915)
PAEPIDIB_00003 3.6e-72 K Transcriptional regulator
PAEPIDIB_00004 1.1e-124 akr5f 1.1.1.346 S reductase
PAEPIDIB_00005 3.3e-117 EGP Major Facilitator Superfamily
PAEPIDIB_00006 3.7e-168 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PAEPIDIB_00007 4e-279 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PAEPIDIB_00008 1.3e-212 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAEPIDIB_00009 2.8e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAEPIDIB_00011 3.6e-91 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAEPIDIB_00012 4.8e-44
PAEPIDIB_00013 7.1e-120 ica2 GT2 M Glycosyl transferase family group 2
PAEPIDIB_00014 1.3e-44 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PAEPIDIB_00015 2.9e-221 mntH P H( )-stimulated, divalent metal cation uptake system
PAEPIDIB_00016 7.1e-59 ypbB 5.1.3.1 S Helix-turn-helix domain
PAEPIDIB_00017 2e-128 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PAEPIDIB_00018 5.9e-12 M Lysin motif
PAEPIDIB_00019 2e-86 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PAEPIDIB_00020 7.5e-83 lytH 3.5.1.28 M Ami_3
PAEPIDIB_00021 3.5e-153 phoH T phosphate starvation-inducible protein PhoH
PAEPIDIB_00022 3e-60 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAEPIDIB_00023 3.6e-30 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PAEPIDIB_00024 1e-154 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAEPIDIB_00025 4.5e-90 recO L Involved in DNA repair and RecF pathway recombination
PAEPIDIB_00026 2.6e-07 dltX S D-Ala-teichoic acid biosynthesis protein
PAEPIDIB_00027 4.5e-219 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAEPIDIB_00028 1.4e-175 dltB M MBOAT, membrane-bound O-acyltransferase family
PAEPIDIB_00029 4.9e-29 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAEPIDIB_00030 2e-151 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PAEPIDIB_00031 9.1e-58 arsC 1.20.4.1 T Low molecular weight phosphatase family
PAEPIDIB_00032 2.7e-171 rpsA 1.17.7.4 J Ribosomal protein S1
PAEPIDIB_00033 4.5e-228 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PAEPIDIB_00034 8.5e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAEPIDIB_00036 4.8e-23 K Acetyltransferase (GNAT) domain
PAEPIDIB_00037 6.2e-112 natA S Domain of unknown function (DUF4162)
PAEPIDIB_00038 2.3e-85 natB CP ABC-type Na efflux pump, permease component
PAEPIDIB_00039 3.1e-95 EG EamA-like transporter family
PAEPIDIB_00040 1.7e-79 yjjH S Calcineurin-like phosphoesterase
PAEPIDIB_00041 1.3e-187 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAEPIDIB_00042 2.4e-40 6.3.3.2 S ASCH
PAEPIDIB_00043 7.8e-71 lepB 3.4.21.89 U Signal peptidase, peptidase S26
PAEPIDIB_00044 2.2e-117 degV S EDD domain protein, DegV family
PAEPIDIB_00045 3.1e-40 K Transcriptional regulator
PAEPIDIB_00046 1.2e-196 FbpA K Fibronectin-binding protein
PAEPIDIB_00047 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAEPIDIB_00048 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAEPIDIB_00049 3.2e-83 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAEPIDIB_00050 1e-39 ypaA S Protein of unknown function (DUF1304)
PAEPIDIB_00052 6.3e-310 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PAEPIDIB_00053 1.9e-167 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAEPIDIB_00054 0.0 dnaE 2.7.7.7 L DNA polymerase
PAEPIDIB_00055 4.3e-15 S Protein of unknown function (DUF2929)
PAEPIDIB_00056 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAEPIDIB_00057 4.3e-203 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAEPIDIB_00058 3.7e-41 XK27_04120 S Putative amino acid metabolism
PAEPIDIB_00059 2.9e-154 iscS 2.8.1.7 E Aminotransferase class V
PAEPIDIB_00060 7.2e-92 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAEPIDIB_00062 5.8e-81 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PAEPIDIB_00063 1.5e-130 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAEPIDIB_00064 8.5e-161 nhaC C Na H antiporter NhaC
PAEPIDIB_00065 7e-127 corA P CorA-like Mg2+ transporter protein
PAEPIDIB_00066 4.3e-298 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PAEPIDIB_00067 6.9e-205 hisS 6.1.1.21 J histidyl-tRNA synthetase
PAEPIDIB_00068 3.6e-150 S Tetratricopeptide repeat protein
PAEPIDIB_00069 3.8e-136 EG EamA-like transporter family
PAEPIDIB_00070 2.1e-72 alkD L DNA alkylation repair enzyme
PAEPIDIB_00071 1.9e-183 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PAEPIDIB_00072 4.8e-103 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAEPIDIB_00073 1.7e-77 trmK 2.1.1.217 S SAM-dependent methyltransferase
PAEPIDIB_00074 2.8e-148 EGP Sugar (and other) transporter
PAEPIDIB_00077 1.8e-38
PAEPIDIB_00078 3.8e-256 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PAEPIDIB_00079 6.2e-21 S Family of unknown function (DUF5322)
PAEPIDIB_00080 1.8e-36 rnhA 3.1.26.4 L Ribonuclease HI
PAEPIDIB_00081 2.7e-173 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PAEPIDIB_00082 1.1e-35 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PAEPIDIB_00084 2.4e-88 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PAEPIDIB_00085 4.5e-171 patA 2.6.1.1 E Aminotransferase
PAEPIDIB_00086 8.6e-115 glcR K DeoR C terminal sensor domain
PAEPIDIB_00087 6.3e-144 ppaC 3.6.1.1 C inorganic pyrophosphatase
PAEPIDIB_00088 1.2e-134 K Transcriptional regulator
PAEPIDIB_00089 2.3e-89 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAEPIDIB_00090 1.5e-84 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PAEPIDIB_00091 5.9e-192 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PAEPIDIB_00092 4.3e-115 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAEPIDIB_00093 2.7e-204 pyrP F Permease
PAEPIDIB_00094 1.3e-75 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAEPIDIB_00095 7.3e-129 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAEPIDIB_00096 5.2e-43 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAEPIDIB_00097 6.7e-57 3.1.3.18 J HAD-hyrolase-like
PAEPIDIB_00098 1.7e-54 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAEPIDIB_00099 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAEPIDIB_00100 3.1e-77 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAEPIDIB_00101 5.8e-118 prmA J Ribosomal protein L11 methyltransferase
PAEPIDIB_00102 7.6e-43 XK27_03960 S Protein of unknown function (DUF3013)
PAEPIDIB_00103 1.5e-143 iunH2 3.2.2.1 F nucleoside hydrolase
PAEPIDIB_00104 6.4e-12
PAEPIDIB_00105 2.2e-68 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAEPIDIB_00106 1.8e-97 udk 2.7.1.48 F Cytidine monophosphokinase
PAEPIDIB_00107 9.3e-129 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAEPIDIB_00108 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAEPIDIB_00109 7.4e-173 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAEPIDIB_00110 9.1e-43 yodB K Transcriptional regulator, HxlR family
PAEPIDIB_00111 2.1e-67 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAEPIDIB_00112 5.9e-87 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAEPIDIB_00115 1.7e-15
PAEPIDIB_00117 5.8e-277 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PAEPIDIB_00118 2.3e-34 S Repeat protein
PAEPIDIB_00119 4e-100 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PAEPIDIB_00120 1.1e-202 M Exporter of polyketide antibiotics
PAEPIDIB_00121 3.3e-129 yjjC V ATPases associated with a variety of cellular activities
PAEPIDIB_00122 2.3e-81 K Bacterial regulatory proteins, tetR family
PAEPIDIB_00123 5.8e-205 G PTS system Galactitol-specific IIC component
PAEPIDIB_00124 2.1e-209 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PAEPIDIB_00125 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAEPIDIB_00126 6.2e-85 dprA LU DNA protecting protein DprA
PAEPIDIB_00127 4.9e-97 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAEPIDIB_00128 5.2e-132 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PAEPIDIB_00129 3.6e-24 yozE S Belongs to the UPF0346 family
PAEPIDIB_00130 5.7e-53 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PAEPIDIB_00131 7.2e-79 ypmR E GDSL-like Lipase/Acylhydrolase
PAEPIDIB_00133 1.3e-102 S Aldo keto reductase
PAEPIDIB_00134 2.4e-35 K helix_turn_helix, mercury resistance
PAEPIDIB_00135 8.6e-135 yvgN C Aldo keto reductase
PAEPIDIB_00136 3.2e-57 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAEPIDIB_00137 4.4e-156 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAEPIDIB_00138 8.5e-276 yfmR S ABC transporter, ATP-binding protein
PAEPIDIB_00139 6.6e-133 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PAEPIDIB_00140 1.1e-107 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PAEPIDIB_00141 1e-106 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAEPIDIB_00142 3.9e-68 xerD L Phage integrase, N-terminal SAM-like domain
PAEPIDIB_00144 1.8e-56 yqeY S YqeY-like protein
PAEPIDIB_00145 4.7e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PAEPIDIB_00146 1.1e-115 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PAEPIDIB_00149 5.8e-100 epsJ1 M Glycosyltransferase like family 2
PAEPIDIB_00150 1.4e-83 M Glycosyltransferase sugar-binding region containing DXD motif
PAEPIDIB_00151 1.9e-93 M transferase activity, transferring glycosyl groups
PAEPIDIB_00152 9.6e-126 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAEPIDIB_00153 1.5e-78 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAEPIDIB_00154 4.4e-83 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAEPIDIB_00155 5.1e-56 dnaD L DnaD domain protein
PAEPIDIB_00156 1e-235 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PAEPIDIB_00157 4e-143 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PAEPIDIB_00158 1.8e-36 ypmB S Protein conserved in bacteria
PAEPIDIB_00159 1.5e-228 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PAEPIDIB_00160 8.1e-94 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PAEPIDIB_00161 2.8e-118 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PAEPIDIB_00162 1.5e-136 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PAEPIDIB_00163 1.3e-113 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PAEPIDIB_00164 1.6e-103 holA 2.7.7.7 L DNA polymerase III delta subunit
PAEPIDIB_00165 2.6e-154 comEC S Competence protein ComEC
PAEPIDIB_00166 2e-69 comEB 3.5.4.12 F ComE operon protein 2
PAEPIDIB_00167 1.4e-50 comEA L Competence protein ComEA
PAEPIDIB_00168 5.8e-268 argS 6.1.1.19 J Arginyl-tRNA synthetase
PAEPIDIB_00169 6.2e-59 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAEPIDIB_00170 2.2e-20
PAEPIDIB_00172 3.9e-122 K LysR substrate binding domain
PAEPIDIB_00173 2.2e-194 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAEPIDIB_00174 1.5e-93 S Acyltransferase family
PAEPIDIB_00175 1e-152 purD 6.3.4.13 F Belongs to the GARS family
PAEPIDIB_00176 8.5e-234 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PAEPIDIB_00177 5.2e-75 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PAEPIDIB_00178 2.4e-139 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PAEPIDIB_00179 2.1e-226 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PAEPIDIB_00180 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAEPIDIB_00181 6.8e-103 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAEPIDIB_00182 2.2e-30 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAEPIDIB_00183 2.2e-96 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PAEPIDIB_00184 2.4e-131 ylbL T Belongs to the peptidase S16 family
PAEPIDIB_00185 4e-49 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAEPIDIB_00186 7.2e-74 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PAEPIDIB_00187 1.1e-17 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PAEPIDIB_00188 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PAEPIDIB_00189 1.6e-102 ftsW D Belongs to the SEDS family
PAEPIDIB_00190 3.3e-148 manN G system, mannose fructose sorbose family IID component
PAEPIDIB_00191 7e-115 manY G PTS system
PAEPIDIB_00192 6e-148 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PAEPIDIB_00193 0.0 typA T GTP-binding protein TypA
PAEPIDIB_00194 9.7e-77 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PAEPIDIB_00195 1.7e-23 yktA S Belongs to the UPF0223 family
PAEPIDIB_00196 3.7e-32 1.1.1.27 C L-malate dehydrogenase activity
PAEPIDIB_00197 2.2e-86 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAEPIDIB_00198 1.6e-24
PAEPIDIB_00199 5e-23 ykzG S Belongs to the UPF0356 family
PAEPIDIB_00200 3.3e-300 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAEPIDIB_00201 2.3e-249 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAEPIDIB_00202 1e-197 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAEPIDIB_00203 6e-196 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAEPIDIB_00204 1.4e-215 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAEPIDIB_00205 4e-18 S Tetratricopeptide repeat
PAEPIDIB_00206 3.8e-267 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAEPIDIB_00207 5.3e-116 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAEPIDIB_00208 5.6e-40 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAEPIDIB_00209 1.8e-32 rpsT J Binds directly to 16S ribosomal RNA
PAEPIDIB_00210 3e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAEPIDIB_00211 7e-198 yfnA E amino acid
PAEPIDIB_00212 5.7e-61 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
PAEPIDIB_00213 7.3e-114 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PAEPIDIB_00214 1.9e-57 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAEPIDIB_00215 1.1e-26 ylqC S Belongs to the UPF0109 family
PAEPIDIB_00216 3.6e-42 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PAEPIDIB_00217 5e-204 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAEPIDIB_00218 7e-40 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PAEPIDIB_00219 9.1e-149 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAEPIDIB_00220 4.7e-211 smc D Required for chromosome condensation and partitioning
PAEPIDIB_00221 1.1e-100 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAEPIDIB_00222 7e-26 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAEPIDIB_00223 1.6e-140 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PAEPIDIB_00224 3.3e-246 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAEPIDIB_00225 2.8e-238 yloV S DAK2 domain fusion protein YloV
PAEPIDIB_00226 4.5e-53 asp S Asp23 family, cell envelope-related function
PAEPIDIB_00227 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PAEPIDIB_00228 3.8e-58 thiN 2.7.6.2 H thiamine pyrophosphokinase
PAEPIDIB_00229 1.8e-111 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAEPIDIB_00230 3.4e-191 KLT serine threonine protein kinase
PAEPIDIB_00231 3.3e-90 stp 3.1.3.16 T phosphatase
PAEPIDIB_00232 2.2e-153 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PAEPIDIB_00233 5.8e-140 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAEPIDIB_00234 2.4e-288 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAEPIDIB_00235 4.4e-121 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAEPIDIB_00236 2.5e-21 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAEPIDIB_00237 1.1e-102 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PAEPIDIB_00238 5.6e-94 2.7.1.89 M Phosphotransferase enzyme family
PAEPIDIB_00239 3.5e-26 arsC 1.20.4.1 P Belongs to the ArsC family
PAEPIDIB_00240 6.1e-187 rodA D Belongs to the SEDS family
PAEPIDIB_00241 1.8e-12 S Protein of unknown function (DUF2969)
PAEPIDIB_00242 1.2e-26 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PAEPIDIB_00243 3.4e-167 mbl D Cell shape determining protein MreB Mrl
PAEPIDIB_00244 9.3e-197 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAEPIDIB_00245 4.1e-15 ywzB S Protein of unknown function (DUF1146)
PAEPIDIB_00246 3.9e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PAEPIDIB_00247 1.7e-236 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAEPIDIB_00248 1.3e-141 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAEPIDIB_00249 6.3e-266 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAEPIDIB_00250 2.7e-57 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAEPIDIB_00251 2.4e-39 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAEPIDIB_00252 1.8e-15 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAEPIDIB_00253 4.5e-97 atpB C it plays a direct role in the translocation of protons across the membrane
PAEPIDIB_00254 5e-100 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAEPIDIB_00255 1e-134 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PAEPIDIB_00256 1.4e-89 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAEPIDIB_00257 2.3e-177 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAEPIDIB_00258 6.8e-86 tdk 2.7.1.21 F thymidine kinase
PAEPIDIB_00259 4.7e-220 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PAEPIDIB_00260 3.5e-110 cobQ S glutamine amidotransferase
PAEPIDIB_00261 2e-111 ampC V Beta-lactamase
PAEPIDIB_00262 1.5e-31
PAEPIDIB_00263 2.6e-119 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAEPIDIB_00264 9.2e-206 glnP P ABC transporter
PAEPIDIB_00266 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAEPIDIB_00267 1.2e-160 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAEPIDIB_00268 1.5e-274 dnaK O Heat shock 70 kDa protein
PAEPIDIB_00269 4.2e-56 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAEPIDIB_00270 1.4e-131 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAEPIDIB_00271 2.5e-95 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PAEPIDIB_00272 1.4e-119 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAEPIDIB_00273 1.3e-55 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAEPIDIB_00274 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAEPIDIB_00275 6.9e-26 ylxQ J ribosomal protein
PAEPIDIB_00276 1.4e-39 ylxR K Protein of unknown function (DUF448)
PAEPIDIB_00277 4.8e-170 nusA K Participates in both transcription termination and antitermination
PAEPIDIB_00278 2.7e-66 rimP J Required for maturation of 30S ribosomal subunits
PAEPIDIB_00279 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAEPIDIB_00280 5.9e-260 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PAEPIDIB_00281 4.1e-157 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PAEPIDIB_00282 5.1e-102 cdsA 2.7.7.41 S Belongs to the CDS family
PAEPIDIB_00283 3.8e-105 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAEPIDIB_00284 7.2e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAEPIDIB_00285 6.3e-115 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PAEPIDIB_00286 2.7e-48 S Domain of unknown function (DUF956)
PAEPIDIB_00287 5.8e-37 ogt 2.1.1.63 H Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAEPIDIB_00289 2e-247 glnA 6.3.1.2 E glutamine synthetase
PAEPIDIB_00290 1.3e-45 glnR K Transcriptional regulator
PAEPIDIB_00291 1.8e-205 ynbB 4.4.1.1 P aluminum resistance
PAEPIDIB_00292 1.9e-111 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAEPIDIB_00293 9.7e-17 WQ51_02665 S Protein of unknown function (DUF3042)
PAEPIDIB_00294 2.7e-46 yqhL P Rhodanese-like protein
PAEPIDIB_00295 4.7e-158 glk 2.7.1.2 G Glucokinase
PAEPIDIB_00296 7.7e-25 yqgQ S Bacterial protein of unknown function (DUF910)
PAEPIDIB_00297 7.4e-70 gluP 3.4.21.105 S Peptidase, S54 family
PAEPIDIB_00298 1.6e-38 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PAEPIDIB_00299 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PAEPIDIB_00300 3e-19 D nuclear chromosome segregation
PAEPIDIB_00301 1.2e-74 yciQ P membrane protein (DUF2207)
PAEPIDIB_00302 5.4e-44 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PAEPIDIB_00303 1.8e-91 engB D Necessary for normal cell division and for the maintenance of normal septation
PAEPIDIB_00304 5.9e-27 yneF S UPF0154 protein
PAEPIDIB_00305 2.2e-30 ynzC S UPF0291 protein
PAEPIDIB_00306 7.2e-83 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAEPIDIB_00307 4.2e-178 recN L May be involved in recombinational repair of damaged DNA
PAEPIDIB_00308 6.6e-49 argR K Regulates arginine biosynthesis genes
PAEPIDIB_00309 1.2e-120 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PAEPIDIB_00310 4.7e-83 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAEPIDIB_00311 1.2e-16 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAEPIDIB_00312 1.2e-146 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAEPIDIB_00313 1.7e-103 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAEPIDIB_00314 1.9e-36 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAEPIDIB_00315 3.7e-46 yqhY S Asp23 family, cell envelope-related function
PAEPIDIB_00316 2.1e-94 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAEPIDIB_00317 1.3e-41 dut S dUTPase
PAEPIDIB_00318 7.2e-117
PAEPIDIB_00319 7.3e-105
PAEPIDIB_00320 4.3e-137 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PAEPIDIB_00321 9.7e-24 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PAEPIDIB_00322 1.6e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAEPIDIB_00323 5e-167 arlS 2.7.13.3 T Histidine kinase
PAEPIDIB_00324 3.1e-111 K response regulator
PAEPIDIB_00326 8.6e-107 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAEPIDIB_00327 1.2e-225 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PAEPIDIB_00328 3.8e-159 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAEPIDIB_00329 4.1e-57 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAEPIDIB_00330 3.4e-92 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PAEPIDIB_00331 6.9e-37
PAEPIDIB_00332 4.8e-134 lys 3.5.1.104 M Glycosyl hydrolases family 25
PAEPIDIB_00333 8.1e-09 hol S Bacteriophage holin
PAEPIDIB_00338 1.3e-28 S Calcineurin-like phosphoesterase
PAEPIDIB_00340 5.3e-102 M Prophage endopeptidase tail
PAEPIDIB_00341 3.5e-61 S Phage tail protein
PAEPIDIB_00342 2e-107 M Phage tail tape measure protein TP901
PAEPIDIB_00343 6.3e-39 S Bacteriophage Gp15 protein
PAEPIDIB_00345 5.7e-38 N domain, Protein
PAEPIDIB_00346 1.7e-16 S Minor capsid protein from bacteriophage
PAEPIDIB_00347 9.3e-17 S Minor capsid protein
PAEPIDIB_00348 2e-29 S Minor capsid protein
PAEPIDIB_00349 8.9e-15
PAEPIDIB_00350 2.3e-98 S T=7 icosahedral viral capsid
PAEPIDIB_00351 3.9e-19 S Phage minor structural protein GP20
PAEPIDIB_00353 1.1e-95 S Phage minor capsid protein 2
PAEPIDIB_00354 6.2e-144 S Phage portal protein, SPP1 Gp6-like
PAEPIDIB_00355 2.6e-167 S Pfam:Terminase_3C
PAEPIDIB_00356 8.4e-23
PAEPIDIB_00358 3.8e-11 arpU S Phage transcriptional regulator, ArpU family
PAEPIDIB_00363 3.9e-16
PAEPIDIB_00364 8.8e-45 S magnesium ion binding
PAEPIDIB_00365 0.0 L Primase C terminal 2 (PriCT-2)
PAEPIDIB_00366 1e-258 L Helicase C-terminal domain protein
PAEPIDIB_00367 1.6e-81
PAEPIDIB_00368 4.3e-39
PAEPIDIB_00369 1.1e-36
PAEPIDIB_00370 3.7e-103 S AAA domain
PAEPIDIB_00371 9.2e-165 D AAA domain
PAEPIDIB_00374 4.5e-15 K Cro/C1-type HTH DNA-binding domain
PAEPIDIB_00375 5.8e-30 S Uncharacterized protein conserved in bacteria (DUF2188)
PAEPIDIB_00376 4.7e-19
PAEPIDIB_00379 6.6e-19
PAEPIDIB_00382 8.3e-12 K Cro/C1-type HTH DNA-binding domain
PAEPIDIB_00383 6.4e-43 K addiction module antidote protein HigA
PAEPIDIB_00384 3.6e-37 E IrrE N-terminal-like domain
PAEPIDIB_00385 3.6e-29 S Domain of unknown function (DUF4352)
PAEPIDIB_00386 9.8e-29
PAEPIDIB_00387 2.8e-80 sip L Belongs to the 'phage' integrase family
PAEPIDIB_00388 2.7e-128 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAEPIDIB_00389 1.9e-128 rpsB J Belongs to the universal ribosomal protein uS2 family
PAEPIDIB_00390 1.5e-27 yazA L GIY-YIG catalytic domain protein
PAEPIDIB_00391 1.1e-93 yabB 2.1.1.223 L Methyltransferase small domain
PAEPIDIB_00392 1.2e-88 plsC 2.3.1.51 I Acyltransferase
PAEPIDIB_00393 1.9e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PAEPIDIB_00394 2e-57 yceD S Uncharacterized ACR, COG1399
PAEPIDIB_00395 1.3e-122 ylbM S Belongs to the UPF0348 family
PAEPIDIB_00396 4.2e-82 H Nodulation protein S (NodS)
PAEPIDIB_00397 1.5e-48 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAEPIDIB_00398 7.2e-72 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PAEPIDIB_00399 2.7e-77 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAEPIDIB_00400 1e-29 yhbY J RNA-binding protein
PAEPIDIB_00401 7.9e-181 yqeH S Ribosome biogenesis GTPase YqeH
PAEPIDIB_00402 2.5e-71 yqeG S HAD phosphatase, family IIIA
PAEPIDIB_00403 7.7e-53 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAEPIDIB_00404 1.4e-24 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PAEPIDIB_00405 1.3e-79 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAEPIDIB_00406 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAEPIDIB_00407 2.2e-107 dnaI L Primosomal protein DnaI
PAEPIDIB_00408 1.6e-79 dnaB L replication initiation and membrane attachment
PAEPIDIB_00409 6.1e-66 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAEPIDIB_00410 2.1e-50 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAEPIDIB_00411 3.3e-107 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PAEPIDIB_00412 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAEPIDIB_00413 6.7e-69 ybhL S Belongs to the BI1 family
PAEPIDIB_00414 2.5e-61 phaJ I N-terminal half of MaoC dehydratase
PAEPIDIB_00415 7.6e-223 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PAEPIDIB_00416 9e-240 sftA D Belongs to the FtsK SpoIIIE SftA family
PAEPIDIB_00417 6.8e-76 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAEPIDIB_00418 4e-45 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PAEPIDIB_00419 7.9e-101 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAEPIDIB_00420 1.6e-98 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PAEPIDIB_00421 1.3e-72 ecsB U ABC transporter
PAEPIDIB_00422 2.8e-94 ecsA V ABC transporter, ATP-binding protein
PAEPIDIB_00423 5.4e-53 hit FG histidine triad
PAEPIDIB_00425 6.6e-114 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAEPIDIB_00426 5e-128 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAEPIDIB_00427 2e-21 yheA S Belongs to the UPF0342 family
PAEPIDIB_00428 1.5e-284 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PAEPIDIB_00430 2.1e-88 ykuT M mechanosensitive ion channel
PAEPIDIB_00431 4.1e-177 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PAEPIDIB_00432 1.5e-60 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PAEPIDIB_00433 5.8e-45 ykuL S CBS domain
PAEPIDIB_00434 5.7e-119 gla U Major intrinsic protein
PAEPIDIB_00435 2.7e-302 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAEPIDIB_00436 2.6e-239 pgi 5.3.1.9 G Belongs to the GPI family
PAEPIDIB_00437 1.5e-230 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAEPIDIB_00438 5.5e-109 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PAEPIDIB_00439 2.3e-102 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PAEPIDIB_00440 2.7e-125 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PAEPIDIB_00441 9.3e-216 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PAEPIDIB_00442 1.5e-63 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PAEPIDIB_00443 7.9e-47 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PAEPIDIB_00444 1.8e-194 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAEPIDIB_00445 6.5e-99 IQ reductase
PAEPIDIB_00446 6.5e-104 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PAEPIDIB_00447 2.2e-27 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAEPIDIB_00448 6.4e-102 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAEPIDIB_00449 4.2e-61 marR K Transcriptional regulator, MarR family
PAEPIDIB_00450 1.3e-65 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PAEPIDIB_00451 3e-36
PAEPIDIB_00453 3.3e-182 S Protein of unknown function DUF262
PAEPIDIB_00454 5.1e-193 pepV 3.5.1.18 E dipeptidase PepV
PAEPIDIB_00455 1.2e-80 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAEPIDIB_00456 3.1e-61 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAEPIDIB_00457 8.3e-187 ytgP S Polysaccharide biosynthesis protein
PAEPIDIB_00458 9.7e-194 cycA E Amino acid permease
PAEPIDIB_00459 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAEPIDIB_00460 7.4e-177 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAEPIDIB_00470 2.1e-07
PAEPIDIB_00480 4.5e-24 L PFAM transposase IS116 IS110 IS902 family
PAEPIDIB_00481 1.3e-42 M Glycosyltransferase like family 2
PAEPIDIB_00482 5.8e-26 S Acetyltransferase (Isoleucine patch superfamily)
PAEPIDIB_00483 6.3e-130 S Membrane protein involved in the export of O-antigen and teichoic acid
PAEPIDIB_00484 3e-41 S Acyltransferase family
PAEPIDIB_00485 3.7e-29
PAEPIDIB_00487 7.2e-214 ugd 1.1.1.22 M UDP binding domain
PAEPIDIB_00488 2.6e-77 epsB M biosynthesis protein
PAEPIDIB_00489 9.3e-82 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PAEPIDIB_00490 1.6e-111 ywqE 3.1.3.48 GM PHP domain protein
PAEPIDIB_00491 1.8e-125 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAEPIDIB_00492 2e-91 rfbP M Bacterial sugar transferase
PAEPIDIB_00493 4e-95 M Core-2/I-Branching enzyme
PAEPIDIB_00494 1.6e-194 glf 5.4.99.9 M UDP-galactopyranose mutase
PAEPIDIB_00495 3.7e-65 S Glycosyltransferase like family 2
PAEPIDIB_00496 2e-160 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PAEPIDIB_00497 5.8e-57 cps3F
PAEPIDIB_00498 9.8e-74 M transferase activity, transferring glycosyl groups
PAEPIDIB_00499 2e-69 rny D Peptidase family M23
PAEPIDIB_00501 8.1e-136 tetA EGP Major facilitator Superfamily
PAEPIDIB_00502 1.8e-32 yvdC S MazG nucleotide pyrophosphohydrolase domain
PAEPIDIB_00503 2.5e-214 yjeM E Amino Acid
PAEPIDIB_00504 1.9e-190 glnPH2 P ABC transporter permease
PAEPIDIB_00505 2.3e-112 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAEPIDIB_00506 6.3e-44 E GDSL-like Lipase/Acylhydrolase
PAEPIDIB_00507 1e-133 coaA 2.7.1.33 F Pantothenic acid kinase
PAEPIDIB_00508 7.6e-275 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PAEPIDIB_00509 3.3e-82
PAEPIDIB_00510 8.5e-34 S Predicted membrane protein (DUF2142)
PAEPIDIB_00511 5e-115 rfbJ M Glycosyl transferase family 2
PAEPIDIB_00512 2.1e-30 gtcA S Teichoic acid glycosylation protein
PAEPIDIB_00513 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PAEPIDIB_00514 1.2e-160 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAEPIDIB_00515 4.7e-96 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PAEPIDIB_00516 5.4e-67 XK27_09620 S NADPH-dependent FMN reductase
PAEPIDIB_00517 2.7e-156 XK27_09615 S reductase
PAEPIDIB_00518 1.5e-39 2.7.7.65 T phosphorelay sensor kinase activity
PAEPIDIB_00519 6.6e-147 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PAEPIDIB_00520 1.5e-55 S Psort location CytoplasmicMembrane, score
PAEPIDIB_00521 3.6e-14
PAEPIDIB_00522 2.9e-44 S Bacterial membrane protein, YfhO
PAEPIDIB_00523 8.5e-22 S Bacterial membrane protein, YfhO
PAEPIDIB_00524 8.8e-102 S Bacterial membrane protein, YfhO
PAEPIDIB_00525 4.2e-129 S Bacterial membrane protein YfhO
PAEPIDIB_00526 3.5e-134 XK27_08315 M Sulfatase
PAEPIDIB_00527 1.9e-168 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PAEPIDIB_00528 2.5e-211 glnP P ABC transporter
PAEPIDIB_00530 6.6e-60 uspA T Universal stress protein family
PAEPIDIB_00531 4e-55 clpL O C-terminal, D2-small domain, of ClpB protein
PAEPIDIB_00532 5.1e-256 clpL O C-terminal, D2-small domain, of ClpB protein
PAEPIDIB_00533 1.1e-25
PAEPIDIB_00534 2.2e-201 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PAEPIDIB_00535 8e-110 puuD S peptidase C26
PAEPIDIB_00536 5.2e-83 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAEPIDIB_00537 4.3e-150 lsa S ABC transporter
PAEPIDIB_00538 7.2e-149 mepA V MATE efflux family protein
PAEPIDIB_00539 4.9e-217 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PAEPIDIB_00540 3.6e-71 L PFAM transposase IS200-family protein
PAEPIDIB_00541 3.6e-69 L HTH-like domain
PAEPIDIB_00542 5.9e-30 L Helix-turn-helix domain
PAEPIDIB_00543 4.2e-208 G glycerol-3-phosphate transporter
PAEPIDIB_00544 1.7e-46 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PAEPIDIB_00545 5.9e-88 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PAEPIDIB_00546 3.3e-25 K MarR family transcriptional regulator
PAEPIDIB_00547 4.4e-40 1.6.5.2 GM NAD(P)H-binding
PAEPIDIB_00548 1.5e-72 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAEPIDIB_00549 3.7e-145 htrA 3.4.21.107 O serine protease
PAEPIDIB_00550 1.3e-116 vicX 3.1.26.11 S domain protein
PAEPIDIB_00551 1.8e-30 yyaQ S YjbR
PAEPIDIB_00552 5.6e-80 yycI S YycH protein
PAEPIDIB_00553 4.6e-103 yycH S YycH protein
PAEPIDIB_00554 1.1e-272 vicK 2.7.13.3 T Histidine kinase
PAEPIDIB_00555 9e-114 K response regulator
PAEPIDIB_00556 6.3e-85 yxeH S hydrolase
PAEPIDIB_00558 3.3e-96 S Domain of unknown function DUF87
PAEPIDIB_00561 1.1e-229 V ABC transporter transmembrane region
PAEPIDIB_00562 3.1e-216 XK27_09600 V ABC transporter, ATP-binding protein
PAEPIDIB_00563 1.2e-31 K Transcriptional regulator, MarR family
PAEPIDIB_00564 2.9e-172 S Putative peptidoglycan binding domain
PAEPIDIB_00566 4e-23 relB L RelB antitoxin
PAEPIDIB_00567 8.4e-62 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PAEPIDIB_00568 1.1e-139 gldA 1.1.1.6 C Iron-containing alcohol dehydrogenase
PAEPIDIB_00569 4.4e-179 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PAEPIDIB_00570 1.6e-46 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PAEPIDIB_00571 1.9e-51 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PAEPIDIB_00572 3.5e-223 pepF E Oligopeptidase F
PAEPIDIB_00573 2.2e-96 yicL EG EamA-like transporter family
PAEPIDIB_00574 2.4e-69 2.3.1.178 J Acetyltransferase (GNAT) domain
PAEPIDIB_00575 4.4e-170 yjjP S Putative threonine/serine exporter
PAEPIDIB_00576 2.8e-109 glcU U sugar transport
PAEPIDIB_00577 3.8e-14 yobS K transcriptional regulator
PAEPIDIB_00578 1.3e-146 mdtG EGP Major facilitator Superfamily
PAEPIDIB_00579 2.5e-13 XK27_08315 M Sulfatase
PAEPIDIB_00580 1.3e-79 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PAEPIDIB_00581 4.1e-177 thrC 4.2.3.1 E Threonine synthase
PAEPIDIB_00582 2.4e-128 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAEPIDIB_00583 5.2e-168 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PAEPIDIB_00584 5.6e-89 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PAEPIDIB_00585 1.8e-24 S peptidoglycan catabolic process
PAEPIDIB_00586 8.2e-19 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PAEPIDIB_00587 2.6e-194 XK27_08315 M Sulfatase
PAEPIDIB_00589 6.4e-168 mdtG EGP Major facilitator Superfamily
PAEPIDIB_00590 1.7e-251 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PAEPIDIB_00591 5.7e-84 treR K UTRA
PAEPIDIB_00592 3.3e-259 treB G phosphotransferase system
PAEPIDIB_00593 3.5e-63 3.1.3.73 G phosphoglycerate mutase
PAEPIDIB_00594 2.4e-82 pncA Q isochorismatase
PAEPIDIB_00595 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PAEPIDIB_00596 1.2e-103 ydhQ K UbiC transcription regulator-associated domain protein
PAEPIDIB_00597 1.7e-171 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAEPIDIB_00598 3.6e-41 K Transcriptional regulator, HxlR family
PAEPIDIB_00599 8.3e-164 C Luciferase-like monooxygenase
PAEPIDIB_00600 2.2e-184 L Probable transposase
PAEPIDIB_00601 7.9e-66 1.5.1.38 S NADPH-dependent FMN reductase
PAEPIDIB_00602 5.8e-117 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PAEPIDIB_00603 3.9e-76 L haloacid dehalogenase-like hydrolase
PAEPIDIB_00604 4e-61 EG EamA-like transporter family
PAEPIDIB_00605 5.3e-118 K AI-2E family transporter
PAEPIDIB_00606 1.3e-173 malY 4.4.1.8 E Aminotransferase, class I
PAEPIDIB_00607 2.1e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAEPIDIB_00608 6.2e-43 S virion core protein, lumpy skin disease virus
PAEPIDIB_00609 5.7e-28
PAEPIDIB_00610 3.1e-246 yjbQ P TrkA C-terminal domain protein
PAEPIDIB_00611 0.0 helD 3.6.4.12 L DNA helicase
PAEPIDIB_00612 4e-87 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PAEPIDIB_00613 2.6e-109 hrtB V ABC transporter permease
PAEPIDIB_00614 1.9e-33 ygfC K transcriptional regulator (TetR family)
PAEPIDIB_00615 1.4e-85 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PAEPIDIB_00616 1.1e-277 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAEPIDIB_00617 6.8e-35 M LysM domain protein
PAEPIDIB_00618 9.8e-115 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PAEPIDIB_00619 7.9e-106 sbcC L Putative exonuclease SbcCD, C subunit
PAEPIDIB_00620 7.6e-58 S LexA-binding, inner membrane-associated putative hydrolase
PAEPIDIB_00621 7.2e-53 perR P Belongs to the Fur family
PAEPIDIB_00622 1.1e-207 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAEPIDIB_00623 1.4e-141 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAEPIDIB_00624 2.5e-86 S (CBS) domain
PAEPIDIB_00625 4.8e-158 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PAEPIDIB_00626 2.2e-75 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAEPIDIB_00627 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAEPIDIB_00628 1.2e-139 yabM S Polysaccharide biosynthesis protein
PAEPIDIB_00629 2.8e-31 yabO J S4 domain protein
PAEPIDIB_00630 1e-21 divIC D Septum formation initiator
PAEPIDIB_00631 1.1e-40 yabR J RNA binding
PAEPIDIB_00632 1.9e-96 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAEPIDIB_00633 1.5e-76 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PAEPIDIB_00634 3e-282 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAEPIDIB_00635 7.8e-131 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PAEPIDIB_00636 1.6e-169 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAEPIDIB_00637 1.9e-259 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PAEPIDIB_00638 8.8e-50 yugI 5.3.1.9 J general stress protein
PAEPIDIB_00639 2.7e-95 trxB2 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PAEPIDIB_00640 3e-92 dedA S SNARE associated Golgi protein
PAEPIDIB_00641 7.8e-32 S Protein of unknown function (DUF1461)
PAEPIDIB_00642 2.9e-113 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PAEPIDIB_00643 1.9e-53 yutD S Protein of unknown function (DUF1027)
PAEPIDIB_00644 3e-57 S Calcineurin-like phosphoesterase
PAEPIDIB_00645 9.3e-184 cycA E Amino acid permease
PAEPIDIB_00646 2.6e-98 ytxK 2.1.1.72 L N-6 DNA Methylase
PAEPIDIB_00648 5.5e-11 S Putative Competence protein ComGF
PAEPIDIB_00650 1.5e-13
PAEPIDIB_00651 1.2e-27 comGC U competence protein ComGC
PAEPIDIB_00652 2.3e-34 comGB NU type II secretion system
PAEPIDIB_00653 1.9e-36 comGB NU type II secretion system
PAEPIDIB_00654 4.7e-121 comGA NU Type II IV secretion system protein
PAEPIDIB_00655 2.1e-102 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAEPIDIB_00656 1.5e-119 yebC K Transcriptional regulatory protein
PAEPIDIB_00657 3.7e-42 S VanZ like family
PAEPIDIB_00658 1.3e-158 ccpA K catabolite control protein A
PAEPIDIB_00659 1e-172 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PAEPIDIB_00660 1.5e-13
PAEPIDIB_00663 8.5e-74 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAEPIDIB_00664 7.1e-35 K helix_turn_helix, Arsenical Resistance Operon Repressor
PAEPIDIB_00665 5.2e-65 hly S protein, hemolysin III
PAEPIDIB_00666 7.3e-41 M1-874 K Domain of unknown function (DUF1836)
PAEPIDIB_00667 9.4e-84 S membrane
PAEPIDIB_00668 1.1e-79 S VIT family
PAEPIDIB_00669 1.8e-148 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PAEPIDIB_00670 7.9e-56 P Plays a role in the regulation of phosphate uptake
PAEPIDIB_00671 1.8e-115 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAEPIDIB_00672 2.7e-114 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAEPIDIB_00673 3e-122 pstA P Phosphate transport system permease protein PstA
PAEPIDIB_00674 4.1e-119 pstC P probably responsible for the translocation of the substrate across the membrane
PAEPIDIB_00675 3.2e-97 pstS P Phosphate
PAEPIDIB_00676 1.3e-41 yjbH Q Thioredoxin
PAEPIDIB_00677 1.5e-232 pepF E oligoendopeptidase F
PAEPIDIB_00678 1.1e-68 coiA 3.6.4.12 S Competence protein
PAEPIDIB_00679 2.1e-47 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PAEPIDIB_00680 1.4e-218 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PAEPIDIB_00687 6.7e-16
PAEPIDIB_00688 1.5e-08
PAEPIDIB_00689 9.9e-38
PAEPIDIB_00690 4.9e-50
PAEPIDIB_00691 0.0 3.4.21.53 O Putative ATP-dependent Lon protease
PAEPIDIB_00692 2e-307 S TIGR02687 family
PAEPIDIB_00694 0.0 V restriction
PAEPIDIB_00695 0.0 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
PAEPIDIB_00696 5.3e-69 S Domain of unknown function (DUF1788)
PAEPIDIB_00697 3.7e-79 S Putative inner membrane protein (DUF1819)
PAEPIDIB_00698 4.3e-26 K Cro/C1-type HTH DNA-binding domain
PAEPIDIB_00700 5.6e-59 hsdM 2.1.1.72 V HsdM N-terminal domain
PAEPIDIB_00701 8.3e-22 3.1.21.3 V Type I restriction modification DNA specificity domain
PAEPIDIB_00702 1.2e-70 L Belongs to the 'phage' integrase family
PAEPIDIB_00703 2e-10 L Plasmid pRiA4b ORF-3-like protein
PAEPIDIB_00704 4.4e-191 XK27_11280 S Psort location CytoplasmicMembrane, score
PAEPIDIB_00705 1.7e-108 rhaD 4.1.2.17, 4.1.2.19 H Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
PAEPIDIB_00706 2.8e-219 rhaA 2.7.1.5, 5.3.1.14 G L-rhamnose isomerase (RhaA)
PAEPIDIB_00707 4e-40 rhaM 5.1.3.32 G Involved in the anomeric conversion of L-rhamnose
PAEPIDIB_00708 5.8e-216 rhaB 2.7.1.5, 5.3.1.14 F Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PAEPIDIB_00709 1.5e-188 iolF EGP Major facilitator Superfamily
PAEPIDIB_00710 2.4e-75 rhaR K helix_turn_helix, arabinose operon control protein
PAEPIDIB_00711 6.4e-50 S Membrane
PAEPIDIB_00712 4.3e-26 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
PAEPIDIB_00713 2.6e-29 yqkB S Belongs to the HesB IscA family
PAEPIDIB_00714 2.3e-65 yxkH G Polysaccharide deacetylase
PAEPIDIB_00715 9.6e-09
PAEPIDIB_00716 2.9e-53 K LysR substrate binding domain
PAEPIDIB_00717 2e-122 MA20_14895 S Conserved hypothetical protein 698
PAEPIDIB_00718 1.1e-199 nupG F Nucleoside
PAEPIDIB_00719 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAEPIDIB_00720 2.2e-49 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAEPIDIB_00721 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PAEPIDIB_00722 2.1e-204 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAEPIDIB_00723 3.9e-159 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAEPIDIB_00724 9e-20 yaaA S S4 domain protein YaaA
PAEPIDIB_00725 9.3e-153 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAEPIDIB_00726 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAEPIDIB_00727 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAEPIDIB_00728 4.8e-45 rpsF J Binds together with S18 to 16S ribosomal RNA
PAEPIDIB_00729 3.3e-63 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PAEPIDIB_00730 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAEPIDIB_00731 2.5e-110 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PAEPIDIB_00732 7.3e-117 S Glycosyl transferase family 2
PAEPIDIB_00733 7.4e-64 D peptidase
PAEPIDIB_00734 0.0 asnB 6.3.5.4 E Asparagine synthase
PAEPIDIB_00735 3.7e-37 yiiE S Protein of unknown function (DUF1211)
PAEPIDIB_00736 3.3e-12 yiiE S Protein of unknown function (DUF1211)
PAEPIDIB_00737 1.6e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAEPIDIB_00738 6.3e-247 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAEPIDIB_00739 3.6e-17 yneR
PAEPIDIB_00740 1.5e-230 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAEPIDIB_00741 2.2e-224 yxbA 6.3.1.12 S ATP-grasp enzyme
PAEPIDIB_00742 3.1e-106 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PAEPIDIB_00743 3.9e-48 fucU 5.1.3.29 G RbsD / FucU transport protein family
PAEPIDIB_00744 3.5e-180 xylB 2.7.1.17 GH19 EGP Major facilitator Superfamily
PAEPIDIB_00745 2.3e-132 rhaB 2.7.1.5, 2.7.1.51 G FGGY family of carbohydrate kinases, N-terminal domain
PAEPIDIB_00746 2.6e-295 fucI 5.3.1.25, 5.3.1.3 G Converts the aldose L-fucose into the corresponding ketose L-fuculose
PAEPIDIB_00747 5.9e-55 fcsR K DeoR C terminal sensor domain
PAEPIDIB_00748 2.5e-101 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
PAEPIDIB_00749 3.2e-08 cps2D 5.1.3.2 M RmlD substrate binding domain
PAEPIDIB_00750 4.8e-40 wecD M Acetyltransferase (GNAT) family
PAEPIDIB_00752 8.6e-28 ybl78 L Conserved phage C-terminus (Phg_2220_C)
PAEPIDIB_00753 1.1e-40 S Protein of unknown function (DUF1211)
PAEPIDIB_00754 1.1e-69 L Transposase DDE domain group 1
PAEPIDIB_00756 5.3e-233 tetP J elongation factor G
PAEPIDIB_00757 1.1e-19 S Fic/DOC family
PAEPIDIB_00759 3.6e-108 L Initiator Replication protein
PAEPIDIB_00760 5.1e-38 S Replication initiator protein A (RepA) N-terminus
PAEPIDIB_00761 1.4e-99 L Probable transposase
PAEPIDIB_00762 5.8e-62 L Resolvase, N-terminal domain
PAEPIDIB_00763 1.9e-18 bglG K antiterminator
PAEPIDIB_00764 4.5e-125 D CobQ CobB MinD ParA nucleotide binding domain protein
PAEPIDIB_00766 1.6e-34
PAEPIDIB_00767 8.1e-09 S CAAX amino terminal protease
PAEPIDIB_00768 0.0 pepN 3.4.11.2 E aminopeptidase
PAEPIDIB_00770 1.8e-07
PAEPIDIB_00773 9.7e-123 yvgN C Aldo keto reductase
PAEPIDIB_00774 2.3e-57 yvbG U MarC family integral membrane protein
PAEPIDIB_00775 9.3e-129 yxjG 2.1.1.14 E Cobalamin-independent synthase, Catalytic domain
PAEPIDIB_00776 3.7e-74 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PAEPIDIB_00777 4.5e-196 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PAEPIDIB_00778 3.8e-161 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PAEPIDIB_00779 2.2e-56 3.1.3.48 K Transcriptional regulator
PAEPIDIB_00780 1.2e-197 1.3.5.4 C FMN_bind
PAEPIDIB_00781 6.5e-117 pepL 3.4.11.5 E Releases the N-terminal proline from various substrates
PAEPIDIB_00782 2e-201 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PAEPIDIB_00783 2.8e-139 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PAEPIDIB_00784 1.9e-80 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PAEPIDIB_00785 2e-64 2.7.1.191 G PTS system sorbose subfamily IIB component
PAEPIDIB_00786 4.4e-101 G PTS system sorbose-specific iic component
PAEPIDIB_00787 2.4e-123 G PTS system mannose/fructose/sorbose family IID component
PAEPIDIB_00788 2e-39 2.7.1.191 G PTS system fructose IIA component
PAEPIDIB_00789 5.5e-231 malL 3.2.1.10 GH13 G Psort location Cytoplasmic, score
PAEPIDIB_00790 3.1e-112 lacI3 K helix_turn _helix lactose operon repressor
PAEPIDIB_00791 2.8e-135 glpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PAEPIDIB_00792 5e-77 hchA S intracellular protease amidase
PAEPIDIB_00793 1.2e-21 K transcriptional regulator
PAEPIDIB_00794 5.6e-150 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PAEPIDIB_00795 1.5e-43 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PAEPIDIB_00796 3.3e-21 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PAEPIDIB_00797 1.5e-251 ctpA 3.6.3.54 P P-type ATPase
PAEPIDIB_00798 5e-66 pgm3 G phosphoglycerate mutase family
PAEPIDIB_00799 8.2e-55 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PAEPIDIB_00800 1.1e-85 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAEPIDIB_00801 9.1e-219 yifK E Amino acid permease
PAEPIDIB_00805 8.3e-126 S Bacteriophage abortive infection AbiH
PAEPIDIB_00806 4.5e-86 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain protein
PAEPIDIB_00807 3.2e-37 hsdM 2.1.1.72 V type I restriction-modification system
PAEPIDIB_00808 1.3e-162 hsdM 2.1.1.72 V cog cog0286
PAEPIDIB_00809 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PAEPIDIB_00810 5.4e-19 K Cro/C1-type HTH DNA-binding domain
PAEPIDIB_00811 9.1e-78 L AAA domain
PAEPIDIB_00812 4.1e-16
PAEPIDIB_00813 1.3e-22
PAEPIDIB_00814 1.3e-75 K phage regulatory protein, rha family
PAEPIDIB_00815 1.3e-17
PAEPIDIB_00816 5e-119 L Mrr N-terminal domain
PAEPIDIB_00817 9.9e-210 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAEPIDIB_00818 9.8e-146 yegS 2.7.1.107 G Lipid kinase
PAEPIDIB_00819 2.8e-255 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAEPIDIB_00820 4e-233 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAEPIDIB_00821 7.6e-38 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAEPIDIB_00822 9.3e-161 camS S sex pheromone
PAEPIDIB_00823 1.3e-279 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAEPIDIB_00824 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PAEPIDIB_00825 4.2e-145 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PAEPIDIB_00830 1.6e-197 dtpT U amino acid peptide transporter
PAEPIDIB_00831 1.1e-07
PAEPIDIB_00833 5.9e-90 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAEPIDIB_00834 4.9e-96 gntR1 K UbiC transcription regulator-associated domain protein
PAEPIDIB_00835 2.5e-90 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PAEPIDIB_00836 3.3e-243 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAEPIDIB_00837 3.6e-130 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PAEPIDIB_00838 8.2e-251 yhgF K Tex-like protein N-terminal domain protein
PAEPIDIB_00839 7.2e-45 ydcK S Belongs to the SprT family
PAEPIDIB_00841 1.3e-115 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAEPIDIB_00842 1.7e-128 mleP2 S Sodium Bile acid symporter family
PAEPIDIB_00843 4.9e-85 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAEPIDIB_00844 1e-33 S Enterocin A Immunity
PAEPIDIB_00845 7.6e-223 pepC 3.4.22.40 E Peptidase C1-like family
PAEPIDIB_00846 4.3e-19 HA62_12640 S GCN5-related N-acetyl-transferase
PAEPIDIB_00847 4e-74 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PAEPIDIB_00848 5.4e-224 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAEPIDIB_00849 8.2e-154 yacL S domain protein
PAEPIDIB_00850 2.9e-247 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAEPIDIB_00851 1.8e-206 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAEPIDIB_00852 6.4e-56 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PAEPIDIB_00853 3.2e-109 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAEPIDIB_00854 5.4e-71 yacP S YacP-like NYN domain
PAEPIDIB_00855 2.1e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PAEPIDIB_00856 2.6e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAEPIDIB_00857 7.7e-84 nusG K Participates in transcription elongation, termination and antitermination
PAEPIDIB_00858 5e-67 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAEPIDIB_00859 1.6e-115 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAEPIDIB_00860 7.6e-75 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAEPIDIB_00861 3.4e-48 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAEPIDIB_00862 1.4e-54
PAEPIDIB_00863 1.6e-301 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAEPIDIB_00864 1e-160 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAEPIDIB_00865 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAEPIDIB_00866 4.8e-45 nrdI F NrdI Flavodoxin like
PAEPIDIB_00867 1.2e-27 nrdH O Glutaredoxin
PAEPIDIB_00868 1.1e-75 rsmC 2.1.1.172 J Methyltransferase
PAEPIDIB_00869 1.6e-61 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAEPIDIB_00870 4.3e-210 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAEPIDIB_00871 7e-34 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAEPIDIB_00872 2.2e-97 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAEPIDIB_00873 9.2e-29 yaaL S Protein of unknown function (DUF2508)
PAEPIDIB_00874 1.4e-65 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAEPIDIB_00875 3.9e-83 holB 2.7.7.7 L DNA polymerase III
PAEPIDIB_00876 1.4e-40 yabA L Involved in initiation control of chromosome replication
PAEPIDIB_00877 4.1e-92 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAEPIDIB_00878 4.7e-81 fat 3.1.2.21 I Acyl-ACP thioesterase
PAEPIDIB_00879 3.5e-140 ansA 3.5.1.1 EJ Asparaginase
PAEPIDIB_00880 3.7e-70 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PAEPIDIB_00881 4.3e-28 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PAEPIDIB_00882 3.2e-160 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAEPIDIB_00883 6.9e-257 uup S ABC transporter, ATP-binding protein
PAEPIDIB_00884 2.8e-98 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAEPIDIB_00885 1.4e-33 S CAAX protease self-immunity
PAEPIDIB_00886 2.4e-33 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAEPIDIB_00887 1.3e-272 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAEPIDIB_00888 2.5e-269 aha1 P COG COG0474 Cation transport ATPase
PAEPIDIB_00889 1.2e-295 ydaO E amino acid
PAEPIDIB_00890 1.6e-157 tagO 2.7.8.33, 2.7.8.35 M transferase
PAEPIDIB_00891 3.2e-128 comFA L Helicase C-terminal domain protein
PAEPIDIB_00892 5.6e-44 comFC S Competence protein
PAEPIDIB_00893 6e-81 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAEPIDIB_00894 7e-95 yeaN P Major Facilitator Superfamily
PAEPIDIB_00895 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAEPIDIB_00896 6.4e-164 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAEPIDIB_00897 9.1e-68 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PAEPIDIB_00898 6e-86 K response regulator
PAEPIDIB_00899 1.2e-85 phoR 2.7.13.3 T Histidine kinase
PAEPIDIB_00900 2.4e-08 pspC KT PspC domain
PAEPIDIB_00901 1.6e-26 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PAEPIDIB_00902 8.7e-133 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PAEPIDIB_00903 1.1e-112 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAEPIDIB_00904 6.1e-273 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PAEPIDIB_00905 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAEPIDIB_00906 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAEPIDIB_00907 1.1e-83 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAEPIDIB_00908 5e-79 ylbE GM NAD dependent epimerase dehydratase family protein
PAEPIDIB_00909 7.5e-126 rapZ S Displays ATPase and GTPase activities
PAEPIDIB_00910 3.1e-152 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PAEPIDIB_00911 1.8e-149 whiA K May be required for sporulation
PAEPIDIB_00912 1.1e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAEPIDIB_00914 1.1e-136 cggR K Putative sugar-binding domain
PAEPIDIB_00915 6.1e-180 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAEPIDIB_00916 1.3e-208 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PAEPIDIB_00917 2.3e-128 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAEPIDIB_00918 9.5e-234 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAEPIDIB_00919 2.2e-132 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAEPIDIB_00920 5e-104 K response regulator
PAEPIDIB_00921 1.8e-169 T PhoQ Sensor
PAEPIDIB_00922 6.7e-146 lmrP E Major Facilitator Superfamily
PAEPIDIB_00923 1.2e-179 clcA P chloride
PAEPIDIB_00924 2.8e-19 secG U Preprotein translocase
PAEPIDIB_00925 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAEPIDIB_00926 6.9e-70 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAEPIDIB_00927 9.1e-42 yxjI
PAEPIDIB_00928 2.4e-116 ycsE S Sucrose-6F-phosphate phosphohydrolase
PAEPIDIB_00929 5.2e-106 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAEPIDIB_00930 2e-143 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PAEPIDIB_00931 3.2e-56 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PAEPIDIB_00932 1.9e-68 dnaQ 2.7.7.7 L DNA polymerase III
PAEPIDIB_00933 3.5e-115 murB 1.3.1.98 M Cell wall formation
PAEPIDIB_00934 2.4e-71 S Protein of unknown function (DUF1361)
PAEPIDIB_00935 8.5e-127 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAEPIDIB_00936 5.3e-68 ybbR S YbbR-like protein
PAEPIDIB_00937 2.6e-226 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAEPIDIB_00938 7.5e-29 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PAEPIDIB_00939 5.3e-131 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PAEPIDIB_00940 3.2e-21 cutC P Participates in the control of copper homeostasis
PAEPIDIB_00941 4e-197 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAEPIDIB_00942 5.9e-164 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAEPIDIB_00943 4.9e-61 ybaK J Aminoacyl-tRNA editing domain
PAEPIDIB_00944 1.7e-98 rrmA 2.1.1.187 H Methyltransferase
PAEPIDIB_00945 4.4e-86 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAEPIDIB_00946 1.6e-284 ftsK D Belongs to the FtsK SpoIIIE SftA family
PAEPIDIB_00947 3.5e-108 ymfF S Peptidase M16 inactive domain protein
PAEPIDIB_00948 1.3e-147 ymfH S Peptidase M16
PAEPIDIB_00949 2.4e-90 IQ Enoyl-(Acyl carrier protein) reductase
PAEPIDIB_00950 2.9e-64 ymfM S Helix-turn-helix domain
PAEPIDIB_00951 4.3e-85 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAEPIDIB_00952 2.3e-159 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAEPIDIB_00953 2.6e-182 rny S Endoribonuclease that initiates mRNA decay
PAEPIDIB_00954 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAEPIDIB_00955 6e-224 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAEPIDIB_00956 7.3e-72 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAEPIDIB_00957 6.3e-153 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAEPIDIB_00958 2.1e-183 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAEPIDIB_00959 1.5e-206 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAEPIDIB_00960 1.8e-12 yajC U Preprotein translocase
PAEPIDIB_00962 4.3e-61 uspA T universal stress protein
PAEPIDIB_00964 2e-208 yfnA E Amino Acid
PAEPIDIB_00965 3.4e-116 lutA C Cysteine-rich domain
PAEPIDIB_00966 2.1e-245 lutB C 4Fe-4S dicluster domain
PAEPIDIB_00967 5.5e-66 yrjD S LUD domain
PAEPIDIB_00968 1e-146 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAEPIDIB_00969 7.5e-13
PAEPIDIB_00970 2.7e-121 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PAEPIDIB_00971 6.7e-187 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PAEPIDIB_00972 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAEPIDIB_00973 2.1e-36 yrzL S Belongs to the UPF0297 family
PAEPIDIB_00974 2.3e-59 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAEPIDIB_00975 1.9e-33 yrzB S Belongs to the UPF0473 family
PAEPIDIB_00976 1.4e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PAEPIDIB_00977 9.5e-18 cvpA S Colicin V production protein
PAEPIDIB_00978 3.9e-310 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAEPIDIB_00979 9.9e-41 trxA O Belongs to the thioredoxin family
PAEPIDIB_00980 1.1e-60 yslB S Protein of unknown function (DUF2507)
PAEPIDIB_00981 2.2e-73 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAEPIDIB_00982 5.1e-42 S Phosphoesterase
PAEPIDIB_00985 1.2e-140 hprA 1.1.1.29 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAEPIDIB_00986 2.8e-305 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAEPIDIB_00987 2.2e-214 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAEPIDIB_00988 4.8e-199 oatA I Acyltransferase
PAEPIDIB_00989 1.4e-16
PAEPIDIB_00991 8.9e-141 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAEPIDIB_00992 6.5e-100 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PAEPIDIB_00993 4e-219 recJ L Single-stranded-DNA-specific exonuclease RecJ
PAEPIDIB_00994 1.3e-80 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAEPIDIB_00995 1.2e-296 S membrane
PAEPIDIB_00996 1.5e-278 pbp2b 3.4.16.4 M Penicillin-binding Protein
PAEPIDIB_00997 1.8e-27 S Protein of unknown function (DUF3290)
PAEPIDIB_00998 3.3e-75 yviA S Protein of unknown function (DUF421)
PAEPIDIB_01000 4.5e-125 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PAEPIDIB_01001 7.7e-200 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PAEPIDIB_01002 1.1e-53 tag 3.2.2.20 L glycosylase
PAEPIDIB_01003 3.2e-73 usp6 T universal stress protein
PAEPIDIB_01005 5.1e-184 rarA L recombination factor protein RarA
PAEPIDIB_01006 3.4e-24 yueI S Protein of unknown function (DUF1694)
PAEPIDIB_01007 7.5e-101 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAEPIDIB_01008 4.2e-56 ytsP 1.8.4.14 T GAF domain-containing protein
PAEPIDIB_01009 5.8e-175 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PAEPIDIB_01010 6.4e-162 iscS2 2.8.1.7 E Aminotransferase class V
PAEPIDIB_01011 1.9e-196 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PAEPIDIB_01012 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAEPIDIB_01013 3.7e-137 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PAEPIDIB_01014 8.1e-80 radC L DNA repair protein
PAEPIDIB_01015 4.5e-21 K Cold shock
PAEPIDIB_01016 3.6e-156 mreB D cell shape determining protein MreB
PAEPIDIB_01017 2.1e-88 mreC M Involved in formation and maintenance of cell shape
PAEPIDIB_01018 2e-54 mreD M rod shape-determining protein MreD
PAEPIDIB_01019 8.3e-77 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PAEPIDIB_01020 1.8e-126 minD D Belongs to the ParA family
PAEPIDIB_01021 1.9e-94 glnP P ABC transporter permease
PAEPIDIB_01022 1.8e-89 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAEPIDIB_01023 3.7e-109 aatB ET ABC transporter substrate-binding protein
PAEPIDIB_01024 9.8e-100 D Alpha beta
PAEPIDIB_01026 1.2e-155 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PAEPIDIB_01027 2.2e-07 S Protein of unknown function (DUF3397)
PAEPIDIB_01028 1.5e-55 mraZ K Belongs to the MraZ family
PAEPIDIB_01029 8e-142 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAEPIDIB_01030 2.5e-11 ftsL D cell division protein FtsL
PAEPIDIB_01031 4e-282 ftsI 3.4.16.4 M Penicillin-binding Protein
PAEPIDIB_01032 8.7e-136 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAEPIDIB_01033 2.2e-185 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAEPIDIB_01034 1.8e-153 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAEPIDIB_01035 1.3e-61 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PAEPIDIB_01036 5.2e-190 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAEPIDIB_01037 9.8e-180 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAEPIDIB_01038 5e-33 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAEPIDIB_01039 3e-19 yggT S YGGT family
PAEPIDIB_01040 1.7e-81 ylmH S S4 domain protein
PAEPIDIB_01041 8.6e-62 divIVA D DivIVA domain protein
PAEPIDIB_01042 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAEPIDIB_01043 2.5e-102 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAEPIDIB_01044 4.4e-74 draG O ADP-ribosylglycohydrolase
PAEPIDIB_01046 1.7e-80 2.7.7.12 C Domain of unknown function (DUF4931)
PAEPIDIB_01047 1.4e-92 T Calcineurin-like phosphoesterase superfamily domain
PAEPIDIB_01048 5.5e-49 lytE M LysM domain protein
PAEPIDIB_01049 5e-19 glpE P Rhodanese Homology Domain
PAEPIDIB_01050 2.4e-27 xlyB 3.5.1.28 CBM50 M LysM domain
PAEPIDIB_01051 6.9e-160 asnA 6.3.1.1 F aspartate--ammonia ligase
PAEPIDIB_01052 7.9e-194 cydA 1.10.3.14 C ubiquinol oxidase
PAEPIDIB_01053 2.5e-141 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PAEPIDIB_01054 1e-203 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PAEPIDIB_01055 4.7e-220 cydD CO ABC transporter transmembrane region
PAEPIDIB_01056 1.1e-96 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAEPIDIB_01057 1.5e-105 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PAEPIDIB_01058 6.6e-157 ndh 1.6.99.3 C NADH dehydrogenase
PAEPIDIB_01059 1.5e-146 pbuO_1 S Permease family
PAEPIDIB_01061 2.4e-32 2.7.7.65 T GGDEF domain
PAEPIDIB_01062 1.7e-129 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
PAEPIDIB_01063 6.5e-183
PAEPIDIB_01064 5.8e-206 S Protein conserved in bacteria
PAEPIDIB_01065 1.2e-201 ydaM M Glycosyl transferase family group 2
PAEPIDIB_01066 0.0 ydaN S Bacterial cellulose synthase subunit
PAEPIDIB_01067 4.1e-113 2.7.7.65 T diguanylate cyclase activity
PAEPIDIB_01068 1.7e-38 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
PAEPIDIB_01069 1.9e-50 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PAEPIDIB_01070 6.9e-309 L Helicase C-terminal domain protein
PAEPIDIB_01071 0.0 rafA 3.2.1.22 G alpha-galactosidase
PAEPIDIB_01072 8.9e-54 S Membrane
PAEPIDIB_01073 3.5e-64 K helix_turn_helix, arabinose operon control protein
PAEPIDIB_01074 2.3e-45
PAEPIDIB_01075 1.3e-204 pipD E Dipeptidase
PAEPIDIB_01076 1.1e-23 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PAEPIDIB_01077 9.7e-191 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAEPIDIB_01078 4.5e-60 speG J Acetyltransferase (GNAT) domain
PAEPIDIB_01079 2.3e-113 yitU 3.1.3.104 S hydrolase
PAEPIDIB_01080 1.6e-79 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PAEPIDIB_01081 4.8e-81
PAEPIDIB_01082 2e-178 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PAEPIDIB_01083 6.7e-42 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PAEPIDIB_01084 1.4e-48 cps4C M Chain length determinant protein
PAEPIDIB_01085 9.4e-65 cpsD D AAA domain
PAEPIDIB_01086 1.2e-221 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 M Psort location CytoplasmicMembrane, score
PAEPIDIB_01087 9.1e-167 2.6.1.102 M Belongs to the DegT DnrJ EryC1 family
PAEPIDIB_01088 4.8e-77 epsL M Bacterial sugar transferase
PAEPIDIB_01089 2.2e-25 pglD 2.3.1.203 S Bacterial transferase hexapeptide (six repeats)
PAEPIDIB_01090 5.3e-121 2.4.1.52 GT4 M Glycosyl transferases group 1
PAEPIDIB_01091 1.8e-79 gtf1 2.4.1.52 GT4 M glycosyl transferase group 1
PAEPIDIB_01092 1.5e-75 M Glycosyltransferase Family 4
PAEPIDIB_01093 1e-42 GT2 V Glycosyl transferase, family 2
PAEPIDIB_01094 2.5e-57 pglI 2.4.1.293 GT2 M Glycosyltransferase like family 2
PAEPIDIB_01096 2.7e-52
PAEPIDIB_01097 2.3e-116 S Glycosyltransferase WbsX
PAEPIDIB_01098 3.5e-61 cps1B GT2,GT4 M Glycosyl transferases group 1
PAEPIDIB_01099 2.2e-104 cps2I S Psort location CytoplasmicMembrane, score
PAEPIDIB_01100 3e-142 lspL 5.1.3.6 GM RmlD substrate binding domain
PAEPIDIB_01101 3.7e-179 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAEPIDIB_01102 3.4e-64 M Glycosyl transferases group 1
PAEPIDIB_01103 5.6e-126 M Glycosyl transferases group 1
PAEPIDIB_01106 3.4e-83 qorB 1.6.5.2 GM NmrA-like family
PAEPIDIB_01107 2.1e-39 K Transcriptional regulator
PAEPIDIB_01108 4.5e-30 S CHY zinc finger
PAEPIDIB_01109 8.6e-86 1.1.1.1 C Zinc-binding dehydrogenase
PAEPIDIB_01111 4.4e-41 S Protein of unknown function (DUF1211)
PAEPIDIB_01112 1.4e-25 ybl78 L Conserved phage C-terminus (Phg_2220_C)
PAEPIDIB_01114 2.5e-41 wecD M Acetyltransferase (GNAT) family
PAEPIDIB_01115 5.5e-74 cps2D 5.1.3.2 M RmlD substrate binding domain
PAEPIDIB_01116 1.2e-65 H Methyltransferase domain
PAEPIDIB_01118 1.3e-16 K DNA-templated transcription, initiation
PAEPIDIB_01120 2.2e-08 S Protein of unknown function (DUF2922)
PAEPIDIB_01123 8.3e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
PAEPIDIB_01124 1e-27 ysxB J Cysteine protease Prp
PAEPIDIB_01125 1.6e-42 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PAEPIDIB_01126 4.7e-09 M LysM domain
PAEPIDIB_01129 9.7e-73
PAEPIDIB_01130 1.2e-100 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PAEPIDIB_01131 1.3e-178 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PAEPIDIB_01132 6e-123 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PAEPIDIB_01133 7e-79 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PAEPIDIB_01134 7.8e-218 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PAEPIDIB_01135 4.6e-37 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAEPIDIB_01136 4.5e-58 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PAEPIDIB_01137 1.1e-56 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PAEPIDIB_01138 5.8e-100 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAEPIDIB_01139 4.5e-58 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAEPIDIB_01140 4.1e-51 yeaL S Protein of unknown function (DUF441)
PAEPIDIB_01141 4.8e-125 cvfB S S1 domain
PAEPIDIB_01142 7.3e-113 xerD D recombinase XerD
PAEPIDIB_01143 1.1e-293 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PAEPIDIB_01144 1.8e-76 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PAEPIDIB_01145 4.4e-189 nhaC C Na H antiporter NhaC
PAEPIDIB_01146 5.1e-64 ypsA S Belongs to the UPF0398 family
PAEPIDIB_01147 1.8e-195 ade 3.5.4.2 F Adenine deaminase C-terminal domain
PAEPIDIB_01149 4.4e-74 2.3.1.178 M GNAT acetyltransferase
PAEPIDIB_01150 7.9e-69 maa 2.3.1.79 S Maltose acetyltransferase
PAEPIDIB_01151 2.8e-56 3.6.1.27 I Acid phosphatase homologues
PAEPIDIB_01152 4.9e-22 XK27_07525 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
PAEPIDIB_01154 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PAEPIDIB_01155 5.2e-202 hsdM 2.1.1.72 V type I restriction-modification system
PAEPIDIB_01156 1.5e-168 repA S Replication initiator protein A
PAEPIDIB_01157 8.5e-35
PAEPIDIB_01158 4.9e-148 D CobQ CobB MinD ParA nucleotide binding domain protein
PAEPIDIB_01159 7.6e-55 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PAEPIDIB_01160 6.2e-48 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PAEPIDIB_01161 4e-31 tnp L MULE transposase domain
PAEPIDIB_01163 8.5e-64 V HNH endonuclease
PAEPIDIB_01164 8.9e-23 tnp L MULE transposase domain
PAEPIDIB_01165 6.6e-51 tnp L MULE transposase domain
PAEPIDIB_01166 2.8e-131 3.6.1.13, 3.6.1.55 F NUDIX domain
PAEPIDIB_01167 2.8e-271 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAEPIDIB_01168 3.6e-57 pncA Q Isochorismatase family
PAEPIDIB_01169 7.2e-104 L Helix-turn-helix domain
PAEPIDIB_01170 2.9e-67 L hmm pf00665
PAEPIDIB_01171 2e-23 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAEPIDIB_01172 1.3e-89 saeS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PAEPIDIB_01173 5.1e-77 K response regulator
PAEPIDIB_01179 4.7e-07
PAEPIDIB_01180 3.9e-263 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PAEPIDIB_01181 1.7e-54 rplI J Binds to the 23S rRNA
PAEPIDIB_01182 1.3e-204 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PAEPIDIB_01183 5.3e-64 C FMN binding
PAEPIDIB_01184 1.6e-230 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAEPIDIB_01186 8.7e-157 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAEPIDIB_01187 3.5e-59 ykhA 3.1.2.20 I Thioesterase superfamily
PAEPIDIB_01188 5.6e-10 S CAAX protease self-immunity
PAEPIDIB_01189 2.8e-81 S Belongs to the UPF0246 family
PAEPIDIB_01190 8.5e-89 2.7.7.65 T phosphorelay sensor kinase activity
PAEPIDIB_01191 1.3e-132 cbiQ P Cobalt transport protein
PAEPIDIB_01192 1.3e-156 P ABC transporter
PAEPIDIB_01193 3.4e-149 cbiO2 P ABC transporter
PAEPIDIB_01194 1.2e-262 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAEPIDIB_01195 4.9e-179 proV E ABC transporter, ATP-binding protein
PAEPIDIB_01196 2.6e-247 gshR 1.8.1.7 C Glutathione reductase
PAEPIDIB_01197 3.5e-132 S Fic/DOC family
PAEPIDIB_01198 9.9e-40 relB L Addiction module antitoxin, RelB DinJ family
PAEPIDIB_01199 1.2e-25
PAEPIDIB_01200 4.3e-113 S protein conserved in bacteria
PAEPIDIB_01201 2e-40
PAEPIDIB_01202 6.1e-26
PAEPIDIB_01203 4.1e-182 L MobA MobL family protein
PAEPIDIB_01204 1.6e-166 D This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PAEPIDIB_01205 9.1e-43 hxlR K Transcriptional regulator, HxlR family
PAEPIDIB_01206 5.1e-195 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PAEPIDIB_01207 2.2e-93
PAEPIDIB_01208 1.2e-47 L Transposase
PAEPIDIB_01209 1.8e-76 cylA V abc transporter atp-binding protein
PAEPIDIB_01210 6.9e-60 cylB V ABC-2 type transporter
PAEPIDIB_01211 5.6e-171 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PAEPIDIB_01212 2.6e-95 K Transcriptional regulator
PAEPIDIB_01213 2.4e-206 arsR K DNA-binding transcription factor activity
PAEPIDIB_01214 5.3e-71 H ThiF family
PAEPIDIB_01215 2.3e-235 stp_1 EGP Major facilitator Superfamily
PAEPIDIB_01216 4.3e-103 tag 3.2.2.20 L glycosylase
PAEPIDIB_01217 3.3e-29 S RelB antitoxin
PAEPIDIB_01218 5.9e-109
PAEPIDIB_01219 3e-78
PAEPIDIB_01220 2.2e-102 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PAEPIDIB_01221 7.3e-46 S Glycosyl transferase family 2
PAEPIDIB_01222 3.6e-143 M Glycosyl transferase family 2
PAEPIDIB_01223 6.8e-47 2.3.1.79 S Hexapeptide repeat of succinyl-transferase
PAEPIDIB_01224 1.9e-120 G Glycosyltransferase Family 4
PAEPIDIB_01225 5.7e-174 rgpAc GT4 M Domain of unknown function (DUF1972)
PAEPIDIB_01226 3.7e-11 S Protein of unknown function (DUF3021)
PAEPIDIB_01227 4.7e-157 L Transposase
PAEPIDIB_01228 6.3e-48 L Transposase
PAEPIDIB_01229 4.6e-79
PAEPIDIB_01230 5.6e-258 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PAEPIDIB_01231 9.1e-76 3.1.21.3 V Type I restriction modification DNA specificity domain
PAEPIDIB_01232 1.6e-131 L Belongs to the 'phage' integrase family
PAEPIDIB_01233 1.2e-36 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PAEPIDIB_01234 2.5e-28 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
PAEPIDIB_01235 5.1e-08
PAEPIDIB_01242 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAEPIDIB_01243 6.8e-26 ykuJ S Protein of unknown function (DUF1797)
PAEPIDIB_01244 1.7e-129 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAEPIDIB_01245 5.4e-128 cpoA GT4 M Glycosyltransferase, group 1 family protein
PAEPIDIB_01246 2.3e-162 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PAEPIDIB_01247 3.1e-285 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAEPIDIB_01248 9.7e-37 ptsH G phosphocarrier protein HPR
PAEPIDIB_01249 1.5e-15
PAEPIDIB_01250 0.0 clpE O Belongs to the ClpA ClpB family
PAEPIDIB_01251 6.6e-23 XK27_09445 S Domain of unknown function (DUF1827)
PAEPIDIB_01252 2.9e-105 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
PAEPIDIB_01253 0.0 rafA 3.2.1.22 G alpha-galactosidase
PAEPIDIB_01254 1.6e-200 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PAEPIDIB_01255 2.3e-163 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAEPIDIB_01256 2.6e-179 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PAEPIDIB_01257 5.9e-111 galR K Transcriptional regulator
PAEPIDIB_01258 4e-289 lacS G Transporter
PAEPIDIB_01259 0.0 lacL 3.2.1.23 G -beta-galactosidase
PAEPIDIB_01260 5.2e-279 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PAEPIDIB_01261 1.4e-108 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PAEPIDIB_01262 8.5e-158 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PAEPIDIB_01263 3.4e-91 yueF S AI-2E family transporter
PAEPIDIB_01264 2.6e-97 ygaC J Belongs to the UPF0374 family
PAEPIDIB_01265 9.4e-192 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAEPIDIB_01266 2.9e-68 recX 2.4.1.337 GT4 S Regulatory protein RecX
PAEPIDIB_01267 1.1e-19 yvrI K RNA polymerase sigma factor, sigma-70 family
PAEPIDIB_01268 7e-23 S Cytochrome B5
PAEPIDIB_01269 1.7e-48 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain (presumed)
PAEPIDIB_01270 7.6e-60
PAEPIDIB_01271 1.3e-43 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PAEPIDIB_01272 6.6e-156 nrnB S DHHA1 domain
PAEPIDIB_01273 1.5e-91 yunF F Protein of unknown function DUF72
PAEPIDIB_01274 3.4e-48 ndoA L Toxic component of a toxin-antitoxin (TA) module
PAEPIDIB_01275 5.4e-13
PAEPIDIB_01276 4.8e-146 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAEPIDIB_01277 1.6e-30 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAEPIDIB_01278 3.4e-208 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PAEPIDIB_01279 4.1e-179 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAEPIDIB_01280 4.9e-65 S Uncharacterized protein conserved in bacteria (DUF2263)
PAEPIDIB_01281 7.7e-61 M ErfK YbiS YcfS YnhG
PAEPIDIB_01283 3.4e-84 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PAEPIDIB_01284 1.2e-180 pbuG S permease
PAEPIDIB_01286 1.8e-78 S Cell surface protein
PAEPIDIB_01288 6.4e-257 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PAEPIDIB_01289 6.3e-61
PAEPIDIB_01290 1.4e-40 rpmE2 J Ribosomal protein L31
PAEPIDIB_01291 5.3e-189 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAEPIDIB_01292 1e-200 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAEPIDIB_01294 1.2e-288 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAEPIDIB_01295 1e-41 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PAEPIDIB_01296 1.8e-32 ywiB S Domain of unknown function (DUF1934)
PAEPIDIB_01297 2e-86 yfeJ 6.3.5.2 F glutamine amidotransferase
PAEPIDIB_01298 3.3e-205 ywfO S HD domain protein
PAEPIDIB_01299 7.5e-88 S hydrolase
PAEPIDIB_01300 8.6e-101 ydcZ S Putative inner membrane exporter, YdcZ
PAEPIDIB_01301 1.3e-63
PAEPIDIB_01303 1.1e-39 L COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PAEPIDIB_01304 2.3e-22
PAEPIDIB_01305 3e-56 spoVK O ATPase family associated with various cellular activities (AAA)
PAEPIDIB_01307 2.2e-86 S overlaps another CDS with the same product name
PAEPIDIB_01308 1.6e-125 S overlaps another CDS with the same product name
PAEPIDIB_01309 1.9e-98 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PAEPIDIB_01310 1.1e-62 bCE_4747 S Beta-lactamase superfamily domain
PAEPIDIB_01311 2e-289 ybiT S ABC transporter, ATP-binding protein
PAEPIDIB_01312 1e-78 2.4.2.3 F Phosphorylase superfamily
PAEPIDIB_01313 1.1e-23
PAEPIDIB_01314 7.6e-112 dkg S reductase
PAEPIDIB_01315 7.7e-19 rimL 1.1.1.25 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAEPIDIB_01316 2.3e-168 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAEPIDIB_01317 1.1e-192 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAEPIDIB_01318 2.1e-46 EGP Transmembrane secretion effector
PAEPIDIB_01319 5.2e-137 purR 2.4.2.7 F pur operon repressor
PAEPIDIB_01320 6.6e-53 adhR K helix_turn_helix, mercury resistance
PAEPIDIB_01321 2e-184 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAEPIDIB_01322 2.5e-104 pfoS S Phosphotransferase system, EIIC
PAEPIDIB_01323 2.2e-126 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAEPIDIB_01324 6.2e-152 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PAEPIDIB_01325 1.9e-196 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PAEPIDIB_01326 2.2e-201 argH 4.3.2.1 E argininosuccinate lyase
PAEPIDIB_01328 1.3e-155 amtB P ammonium transporter
PAEPIDIB_01329 2.8e-117 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PAEPIDIB_01330 6.6e-46 argR K Regulates arginine biosynthesis genes
PAEPIDIB_01331 4.2e-134 arcT 2.6.1.1 E Cys/Met metabolism PLP-dependent enzyme
PAEPIDIB_01332 1.7e-90 S Alpha/beta hydrolase of unknown function (DUF915)
PAEPIDIB_01333 1.2e-22 veg S Biofilm formation stimulator VEG
PAEPIDIB_01334 7.5e-134 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAEPIDIB_01335 1.7e-86 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PAEPIDIB_01336 8.3e-105 tatD L hydrolase, TatD family
PAEPIDIB_01337 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAEPIDIB_01338 4.3e-127
PAEPIDIB_01339 2.1e-153 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PAEPIDIB_01340 7.2e-43 VPA1512 ET Bacterial extracellular solute-binding proteins, family 3
PAEPIDIB_01341 2.3e-31 K Transcriptional regulator
PAEPIDIB_01342 3.5e-104 ybhR V ABC transporter
PAEPIDIB_01343 8.4e-83 ybhF_2 V abc transporter atp-binding protein
PAEPIDIB_01344 9.4e-103 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PAEPIDIB_01345 2.3e-171 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAEPIDIB_01346 9.3e-128 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAEPIDIB_01347 2.3e-272 helD 3.6.4.12 L DNA helicase
PAEPIDIB_01349 1.3e-114 htpX O Belongs to the peptidase M48B family
PAEPIDIB_01350 1.5e-71 lemA S LemA family
PAEPIDIB_01351 1.1e-54 L phosphatase homologous to the C-terminal domain of histone macroH2A1
PAEPIDIB_01352 3.2e-45 yjcF K protein acetylation
PAEPIDIB_01354 3.3e-253 yfiC V ABC transporter
PAEPIDIB_01355 2.7e-172 lmrA V ABC transporter, ATP-binding protein
PAEPIDIB_01356 4.6e-37 lmrA V ABC transporter, ATP-binding protein
PAEPIDIB_01357 5.8e-35 K Bacterial regulatory proteins, tetR family
PAEPIDIB_01358 7.3e-246 yhcA V ABC transporter, ATP-binding protein
PAEPIDIB_01359 7e-224 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAEPIDIB_01360 4.3e-116 G Transporter, major facilitator family protein
PAEPIDIB_01361 1.9e-20 G Transporter, major facilitator family protein
PAEPIDIB_01362 2.2e-90 lacX 5.1.3.3 G Aldose 1-epimerase
PAEPIDIB_01363 3.3e-142 hpk31 2.7.13.3 T Histidine kinase
PAEPIDIB_01364 2.5e-113 K response regulator
PAEPIDIB_01365 1.2e-89 patB 4.4.1.8 E Aminotransferase, class I
PAEPIDIB_01366 1.3e-91 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PAEPIDIB_01367 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAEPIDIB_01368 1.3e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAEPIDIB_01369 6.1e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAEPIDIB_01370 3.3e-23 pilD 3.4.23.43 NOU aspartic-type endopeptidase activity
PAEPIDIB_01371 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAEPIDIB_01372 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAEPIDIB_01373 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAEPIDIB_01374 1.6e-55 ctsR K Belongs to the CtsR family
PAEPIDIB_01376 2.5e-119 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAEPIDIB_01377 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PAEPIDIB_01378 3.7e-159 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAEPIDIB_01379 1.4e-186 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAEPIDIB_01380 2.2e-131 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PAEPIDIB_01390 6.4e-44 XK27_01125 L PFAM IS66 Orf2 family protein
PAEPIDIB_01391 1.7e-147 scrR K helix_turn _helix lactose operon repressor
PAEPIDIB_01392 1.8e-217 scrB 3.2.1.26 GH32 G invertase
PAEPIDIB_01393 6.1e-282 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
PAEPIDIB_01394 2e-183 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PAEPIDIB_01395 1.6e-114 ntpJ P Potassium uptake protein
PAEPIDIB_01396 2.2e-58 ktrA P TrkA-N domain
PAEPIDIB_01397 5.7e-54 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PAEPIDIB_01398 1.1e-43 K helix_turn_helix isocitrate lyase regulation
PAEPIDIB_01399 5.3e-120 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAEPIDIB_01400 1.4e-102 pfoS S Phosphotransferase system, EIIC
PAEPIDIB_01401 1.4e-19
PAEPIDIB_01402 1.5e-93 S Predicted membrane protein (DUF2207)
PAEPIDIB_01403 1.2e-54 bioY S BioY family
PAEPIDIB_01404 5.7e-184 lmrB EGP Major facilitator Superfamily
PAEPIDIB_01405 2.5e-95 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PAEPIDIB_01406 7.6e-74 glcR K DeoR C terminal sensor domain
PAEPIDIB_01407 1e-60 yceE S haloacid dehalogenase-like hydrolase
PAEPIDIB_01408 2.3e-29 S CAAX protease self-immunity
PAEPIDIB_01410 1.2e-33 S Domain of unknown function (DUF4811)
PAEPIDIB_01411 2.1e-197 lmrB EGP Major facilitator Superfamily
PAEPIDIB_01412 4.2e-32 merR K MerR HTH family regulatory protein
PAEPIDIB_01413 1.8e-39 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAEPIDIB_01414 9.1e-71 S Protein of unknown function (DUF554)
PAEPIDIB_01415 6.9e-120 G Bacterial extracellular solute-binding protein
PAEPIDIB_01416 3e-79 baeR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAEPIDIB_01417 1.2e-100 baeS T Histidine kinase
PAEPIDIB_01418 7e-80 rbsB G sugar-binding domain protein
PAEPIDIB_01419 9e-152 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PAEPIDIB_01420 6.4e-116 manY G PTS system sorbose-specific iic component
PAEPIDIB_01421 2.1e-147 manN G system, mannose fructose sorbose family IID component
PAEPIDIB_01422 3.2e-52 manO S Domain of unknown function (DUF956)
PAEPIDIB_01423 2.1e-70 mltD CBM50 M NlpC P60 family protein
PAEPIDIB_01424 4.7e-130 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PAEPIDIB_01425 1.6e-163 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAEPIDIB_01426 2.4e-75 ung2 3.2.2.27 L Uracil-DNA glycosylase
PAEPIDIB_01427 1e-47 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PAEPIDIB_01428 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PAEPIDIB_01429 3e-106 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAEPIDIB_01430 6.5e-37 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PAEPIDIB_01431 2e-46 S CRISPR-associated protein (Cas_Csn2)
PAEPIDIB_01432 7.8e-38 K transcriptional regulator PadR family
PAEPIDIB_01433 3.2e-19 XK27_06920 S Protein of unknown function (DUF1700)
PAEPIDIB_01434 1.2e-15 S Putative adhesin
PAEPIDIB_01435 2.2e-16 pspC KT PspC domain
PAEPIDIB_01437 5.1e-13 S Enterocin A Immunity
PAEPIDIB_01438 4e-236 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAEPIDIB_01439 1.3e-260 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PAEPIDIB_01440 4.3e-100 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAEPIDIB_01441 1.1e-166 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAEPIDIB_01442 1.5e-120 potB P ABC transporter permease
PAEPIDIB_01443 4.5e-104 potC U Binding-protein-dependent transport system inner membrane component
PAEPIDIB_01444 1.3e-159 potD P ABC transporter
PAEPIDIB_01445 3.5e-132 ABC-SBP S ABC transporter
PAEPIDIB_01446 3.3e-113 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PAEPIDIB_01447 6.7e-107 XK27_08845 S ABC transporter, ATP-binding protein
PAEPIDIB_01448 2.8e-66 M ErfK YbiS YcfS YnhG
PAEPIDIB_01449 7.7e-53 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAEPIDIB_01450 4.2e-224 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAEPIDIB_01451 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAEPIDIB_01452 1.2e-102 pgm3 G phosphoglycerate mutase
PAEPIDIB_01453 4.7e-56 S CAAX protease self-immunity
PAEPIDIB_01454 2.2e-47 C Flavodoxin
PAEPIDIB_01455 9.7e-60 yphH S Cupin domain
PAEPIDIB_01456 3.6e-46 yphJ 4.1.1.44 S decarboxylase
PAEPIDIB_01457 2.9e-143 E methionine synthase, vitamin-B12 independent
PAEPIDIB_01458 7.4e-107 metQ1 P Belongs to the nlpA lipoprotein family
PAEPIDIB_01459 1.5e-149 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAEPIDIB_01460 2.7e-70 metI P ABC transporter permease
PAEPIDIB_01461 3.3e-134 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PAEPIDIB_01462 3e-84 drgA C nitroreductase
PAEPIDIB_01463 2.5e-83 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PAEPIDIB_01464 1.7e-106 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
PAEPIDIB_01465 6.2e-172 npr 1.11.1.1 S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PAEPIDIB_01466 4.8e-264 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PAEPIDIB_01468 2.3e-150 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAEPIDIB_01469 2.4e-31 metI U ABC transporter permease
PAEPIDIB_01470 2.5e-128 metQ M Belongs to the nlpA lipoprotein family
PAEPIDIB_01471 1.8e-53 S Protein of unknown function (DUF4256)
PAEPIDIB_01474 1.8e-177 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PAEPIDIB_01475 5.7e-167 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PAEPIDIB_01476 2.6e-180 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PAEPIDIB_01477 4e-230 lpdA 1.8.1.4 C Dehydrogenase
PAEPIDIB_01478 8.1e-148 lplA 6.3.1.20 H Lipoate-protein ligase
PAEPIDIB_01479 9.2e-56 S Protein of unknown function (DUF975)
PAEPIDIB_01480 5.7e-78 E GDSL-like Lipase/Acylhydrolase family
PAEPIDIB_01481 1.4e-38
PAEPIDIB_01482 4.1e-27 gcvR T Belongs to the UPF0237 family
PAEPIDIB_01483 2.1e-220 XK27_08635 S UPF0210 protein
PAEPIDIB_01484 4.5e-87 fruR K DeoR C terminal sensor domain
PAEPIDIB_01485 4.1e-151 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PAEPIDIB_01486 4.8e-282 fruA 2.7.1.202 GT Phosphotransferase System
PAEPIDIB_01487 1.2e-143 dapE 3.5.1.18 E Peptidase dimerisation domain
PAEPIDIB_01488 1e-149 E glutamate:sodium symporter activity
PAEPIDIB_01489 1.2e-145 Q Imidazolonepropionase and related amidohydrolases
PAEPIDIB_01490 9.1e-50 cps3F
PAEPIDIB_01491 4.6e-83 S Membrane
PAEPIDIB_01492 1.8e-254 E Amino acid permease
PAEPIDIB_01493 2.9e-225 cadA P P-type ATPase
PAEPIDIB_01494 6.4e-114 degV S EDD domain protein, DegV family
PAEPIDIB_01495 1.1e-148 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PAEPIDIB_01496 1.2e-56 yfeJ 6.3.5.2 F glutamine amidotransferase
PAEPIDIB_01497 7.2e-27 ydiI Q Thioesterase superfamily
PAEPIDIB_01498 1.5e-144 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PAEPIDIB_01499 3.5e-141 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PAEPIDIB_01500 5.6e-82 S L,D-transpeptidase catalytic domain
PAEPIDIB_01501 8.8e-166 EGP Major facilitator Superfamily
PAEPIDIB_01502 2.3e-21 K helix_turn_helix multiple antibiotic resistance protein
PAEPIDIB_01503 6e-226 pipD E Dipeptidase
PAEPIDIB_01504 4.1e-126 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAEPIDIB_01505 2.6e-32 ywjH S Protein of unknown function (DUF1634)
PAEPIDIB_01506 1.7e-119 yxaA S membrane transporter protein
PAEPIDIB_01507 4.5e-83 lysR5 K LysR substrate binding domain
PAEPIDIB_01508 7.2e-57 lssY 3.6.1.27 I phosphatidate phosphatase activity
PAEPIDIB_01509 3.2e-14 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PAEPIDIB_01510 3.3e-271 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PAEPIDIB_01511 2.3e-69 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PAEPIDIB_01512 1.9e-243 lysP E amino acid
PAEPIDIB_01513 4.8e-190 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAEPIDIB_01514 2.3e-17
PAEPIDIB_01517 1.5e-165 potE2 E amino acid
PAEPIDIB_01518 6.6e-148 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PAEPIDIB_01519 5.2e-115 queH 1.17.99.6, 3.1.26.4 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PAEPIDIB_01520 1.1e-57 racA K Domain of unknown function (DUF1836)
PAEPIDIB_01521 7e-81 yitS S EDD domain protein, DegV family
PAEPIDIB_01522 5.1e-26 yjaB_1 K Acetyltransferase (GNAT) domain
PAEPIDIB_01524 1e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAEPIDIB_01525 0.0 O Belongs to the peptidase S8 family
PAEPIDIB_01526 4.1e-53 1.14.12.17 C Oxidoreductase NAD-binding domain
PAEPIDIB_01527 2.5e-58 tlpA2 L Transposase IS200 like
PAEPIDIB_01528 1.1e-157 L transposase, IS605 OrfB family
PAEPIDIB_01529 3.2e-85 dps P Ferritin-like domain
PAEPIDIB_01530 1.9e-124 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PAEPIDIB_01531 9.4e-38 L hmm pf00665
PAEPIDIB_01532 5.5e-71 tnp L Transposase IS66 family
PAEPIDIB_01533 4.8e-32 P Heavy-metal-associated domain
PAEPIDIB_01534 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PAEPIDIB_01535 4.8e-67 tnp L Transposase IS66 family
PAEPIDIB_01536 1.4e-26 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PAEPIDIB_01537 2.3e-25 L Resolvase, N-terminal domain
PAEPIDIB_01538 7.5e-80 L PFAM Integrase catalytic region
PAEPIDIB_01539 1.1e-07 L Helix-turn-helix domain
PAEPIDIB_01540 1.2e-11 L Helix-turn-helix domain
PAEPIDIB_01542 1.3e-128 EGP Major Facilitator Superfamily
PAEPIDIB_01543 1.9e-95 EGP Major Facilitator Superfamily
PAEPIDIB_01544 5.3e-71 K Transcriptional regulator, LysR family
PAEPIDIB_01545 1.6e-138 G Xylose isomerase-like TIM barrel
PAEPIDIB_01546 4.6e-117 IQ Enoyl-(Acyl carrier protein) reductase
PAEPIDIB_01547 6.1e-217 1.3.5.4 C FAD binding domain
PAEPIDIB_01548 8.4e-138 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PAEPIDIB_01549 4.5e-71 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PAEPIDIB_01550 3.2e-142 xerS L Phage integrase family
PAEPIDIB_01554 2.3e-93 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PAEPIDIB_01555 8.1e-71 ptp3 3.1.3.48 T Tyrosine phosphatase family
PAEPIDIB_01556 4.9e-76 desR K helix_turn_helix, Lux Regulon
PAEPIDIB_01557 1.1e-57 salK 2.7.13.3 T Histidine kinase
PAEPIDIB_01558 1.9e-53 yvfS V ABC-2 type transporter
PAEPIDIB_01559 5.2e-79 yvfR V ABC transporter
PAEPIDIB_01560 1.2e-99 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PAEPIDIB_01561 1.7e-79 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PAEPIDIB_01562 2.1e-30
PAEPIDIB_01563 8.2e-16
PAEPIDIB_01564 4.7e-112 rssA S Phospholipase, patatin family
PAEPIDIB_01565 1.5e-136 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAEPIDIB_01566 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PAEPIDIB_01567 1.2e-44 S VIT family
PAEPIDIB_01568 9.4e-240 sufB O assembly protein SufB
PAEPIDIB_01569 4.9e-41 nifU C SUF system FeS assembly protein, NifU family
PAEPIDIB_01570 4.3e-148 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PAEPIDIB_01571 1.6e-142 sufD O FeS assembly protein SufD
PAEPIDIB_01572 3.6e-116 sufC O FeS assembly ATPase SufC
PAEPIDIB_01573 1.4e-223 E ABC transporter, substratebinding protein
PAEPIDIB_01575 1e-19 S protein encoded in hypervariable junctions of pilus gene clusters
PAEPIDIB_01576 2.5e-27 K Helix-turn-helix XRE-family like proteins
PAEPIDIB_01578 9.6e-47 V ABC-2 family transporter protein
PAEPIDIB_01579 1.1e-73 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
PAEPIDIB_01580 1.7e-105 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PAEPIDIB_01581 2.3e-90 KT Transcriptional regulatory protein, C terminal
PAEPIDIB_01582 1.3e-75 spaC2 V Lanthionine synthetase C-like protein
PAEPIDIB_01583 1.4e-156 spaT V ABC transporter
PAEPIDIB_01584 3.1e-11 spaT V ATPases associated with a variety of cellular activities
PAEPIDIB_01585 8.3e-38 spaB S Lantibiotic dehydratase, C terminus
PAEPIDIB_01586 4.1e-149 spaB S Lantibiotic dehydratase, C terminus
PAEPIDIB_01588 2.5e-136 pfoS S Phosphotransferase system, EIIC
PAEPIDIB_01589 5.5e-117 ldhA 1.1.1.28 CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PAEPIDIB_01590 9.1e-63 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
PAEPIDIB_01591 9e-36 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PAEPIDIB_01592 1.4e-136 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PAEPIDIB_01593 4.8e-83 srlA G PTS system enzyme II sorbitol-specific factor
PAEPIDIB_01594 6.4e-42 gutM K Glucitol operon activator protein (GutM)
PAEPIDIB_01595 5.8e-104 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
PAEPIDIB_01596 4e-110 IQ NAD dependent epimerase/dehydratase family
PAEPIDIB_01597 4.7e-163 ytbD EGP Major facilitator Superfamily
PAEPIDIB_01598 1e-98 fabK 1.3.1.9 S Nitronate monooxygenase
PAEPIDIB_01599 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PAEPIDIB_01600 9.2e-188 tonB M YSIRK type signal peptide
PAEPIDIB_01601 8.2e-266 fbp 3.1.3.11 G phosphatase activity
PAEPIDIB_01602 3.2e-70 xerD L Phage integrase, N-terminal SAM-like domain
PAEPIDIB_01604 5.1e-14
PAEPIDIB_01606 8.7e-28 S Phage gp6-like head-tail connector protein
PAEPIDIB_01607 1.7e-96
PAEPIDIB_01610 2.5e-19
PAEPIDIB_01611 3.8e-27 S Phage Mu protein F like protein
PAEPIDIB_01613 2.3e-186 mtnE 2.6.1.83 E Aminotransferase
PAEPIDIB_01614 1.7e-81 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PAEPIDIB_01615 9.8e-67 S Protein of unknown function (DUF1440)
PAEPIDIB_01616 7.7e-41 S Iron-sulfur cluster assembly protein
PAEPIDIB_01617 4.7e-112 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PAEPIDIB_01618 6.5e-74 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PAEPIDIB_01619 7.8e-208 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAEPIDIB_01620 7.9e-155 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAEPIDIB_01621 8e-65 G Xylose isomerase domain protein TIM barrel
PAEPIDIB_01622 1.1e-53 ndk 2.7.4.6 F Belongs to the NDK family
PAEPIDIB_01623 6.5e-90 nanK GK ROK family
PAEPIDIB_01624 1.3e-127 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PAEPIDIB_01625 3.3e-92 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PAEPIDIB_01626 4.3e-75 K Helix-turn-helix domain, rpiR family
PAEPIDIB_01627 1.2e-216 yjeM E Amino Acid
PAEPIDIB_01629 1.2e-31 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAEPIDIB_01630 4.3e-26 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
PAEPIDIB_01631 2.9e-93 yihY S Belongs to the UPF0761 family
PAEPIDIB_01632 2.8e-12 mltD CBM50 M Lysin motif
PAEPIDIB_01633 1.2e-152 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PAEPIDIB_01634 1.2e-143 map 3.4.11.18 E Methionine Aminopeptidase
PAEPIDIB_01635 5.1e-54 fld C Flavodoxin
PAEPIDIB_01636 8.7e-53 gtcA S Teichoic acid glycosylation protein
PAEPIDIB_01637 0.0 S Bacterial membrane protein YfhO
PAEPIDIB_01638 5.2e-120 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
PAEPIDIB_01639 1.7e-122 S Sulfite exporter TauE/SafE
PAEPIDIB_01640 1.1e-70 K Sugar-specific transcriptional regulator TrmB
PAEPIDIB_01641 9.3e-169 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAEPIDIB_01642 3.5e-182 pepS E Thermophilic metalloprotease (M29)
PAEPIDIB_01643 3e-266 E Amino acid permease
PAEPIDIB_01644 4.9e-85 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PAEPIDIB_01645 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PAEPIDIB_01646 2.9e-78 galM 5.1.3.3 G Aldose 1-epimerase
PAEPIDIB_01647 4.3e-213 malT G Transporter, major facilitator family protein
PAEPIDIB_01648 4.2e-101 malR K Transcriptional regulator, LacI family
PAEPIDIB_01649 2.3e-279 kup P Transport of potassium into the cell
PAEPIDIB_01651 2e-20 S Domain of unknown function (DUF3284)
PAEPIDIB_01652 5.2e-160 yfmL L DEAD DEAH box helicase
PAEPIDIB_01653 7.7e-127 mocA S Oxidoreductase
PAEPIDIB_01654 2e-24 S Domain of unknown function (DUF4828)
PAEPIDIB_01655 1.2e-175 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PAEPIDIB_01656 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PAEPIDIB_01657 4.7e-194 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PAEPIDIB_01658 1.4e-119 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PAEPIDIB_01659 4.2e-161 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PAEPIDIB_01660 2.8e-266 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PAEPIDIB_01661 3.6e-220 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PAEPIDIB_01662 4.9e-42 O ADP-ribosylglycohydrolase
PAEPIDIB_01663 5.5e-221 gdhA 1.4.1.4 E Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PAEPIDIB_01664 6.4e-209 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PAEPIDIB_01665 9.7e-35 K GNAT family
PAEPIDIB_01666 1.7e-40
PAEPIDIB_01668 1.6e-159 mgtE P Acts as a magnesium transporter
PAEPIDIB_01669 7.6e-94 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PAEPIDIB_01670 1.3e-116 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAEPIDIB_01671 2.5e-94 yjbM 2.7.6.5 S RelA SpoT domain protein
PAEPIDIB_01672 9e-255 topB 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PAEPIDIB_01673 1.7e-35 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PAEPIDIB_01674 6.3e-193 pbuX F xanthine permease
PAEPIDIB_01675 9.7e-74 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAEPIDIB_01676 1.6e-61 acmC 3.2.1.96 NU mannosyl-glycoprotein
PAEPIDIB_01677 5.5e-64 S ECF transporter, substrate-specific component
PAEPIDIB_01678 1.7e-126 mleP S Sodium Bile acid symporter family
PAEPIDIB_01679 1.7e-248 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PAEPIDIB_01680 1.8e-71 mleR K LysR family
PAEPIDIB_01681 1.1e-56 K transcriptional
PAEPIDIB_01682 5.9e-41 K Bacterial regulatory proteins, tetR family
PAEPIDIB_01683 6.1e-60 T Belongs to the universal stress protein A family
PAEPIDIB_01684 8.1e-44 K Copper transport repressor CopY TcrY
PAEPIDIB_01685 6.1e-116 3.2.1.18 GH33 M Rib/alpha-like repeat
PAEPIDIB_01686 1.4e-113 3.2.1.18 GH33 M Rib/alpha-like repeat
PAEPIDIB_01688 1.9e-95 ypuA S Protein of unknown function (DUF1002)
PAEPIDIB_01689 8.4e-60 dedA 3.1.3.1 S SNARE associated Golgi protein
PAEPIDIB_01690 4.8e-10 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAEPIDIB_01691 7.1e-147 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAEPIDIB_01692 4.6e-36 yncA 2.3.1.79 S Maltose acetyltransferase
PAEPIDIB_01693 5.3e-206 yflS P Sodium:sulfate symporter transmembrane region
PAEPIDIB_01694 7.2e-200 frdC 1.3.5.4 C FAD binding domain
PAEPIDIB_01695 3.9e-238 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PAEPIDIB_01696 2e-14 ybaN S Protein of unknown function (DUF454)
PAEPIDIB_01697 8.2e-177 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PAEPIDIB_01698 8.8e-58 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PAEPIDIB_01699 2.8e-96 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAEPIDIB_01700 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PAEPIDIB_01701 5.1e-72 ywlG S Belongs to the UPF0340 family
PAEPIDIB_01702 5.2e-65 S Acetyltransferase (GNAT) domain
PAEPIDIB_01704 2.2e-41 K Cro/C1-type HTH DNA-binding domain
PAEPIDIB_01705 9e-164 spoVK O PFAM ATPase family associated with various cellular activities (AAA)
PAEPIDIB_01709 3.9e-10
PAEPIDIB_01710 3.8e-99 V domain protein
PAEPIDIB_01711 1.3e-119 xth 3.1.11.2 L exodeoxyribonuclease III
PAEPIDIB_01712 1.6e-17
PAEPIDIB_01713 1.1e-104 azlC E AzlC protein
PAEPIDIB_01714 1.3e-38 azlD S branched-chain amino acid
PAEPIDIB_01715 8.9e-65 I alpha/beta hydrolase fold
PAEPIDIB_01716 3.1e-25
PAEPIDIB_01717 1.2e-58 3.6.1.27 I phosphatase
PAEPIDIB_01718 5.4e-23
PAEPIDIB_01719 2.2e-93 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PAEPIDIB_01720 1.2e-88 sirR K Helix-turn-helix diphteria tox regulatory element
PAEPIDIB_01721 3.1e-27 cspC K Cold shock protein
PAEPIDIB_01722 4.3e-82 thrE S Putative threonine/serine exporter
PAEPIDIB_01723 2.8e-49 S Threonine/Serine exporter, ThrE
PAEPIDIB_01724 3.2e-121 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PAEPIDIB_01725 8.4e-87 S Sucrose-6F-phosphate phosphohydrolase
PAEPIDIB_01726 1.9e-34 trxA O Belongs to the thioredoxin family
PAEPIDIB_01727 2.7e-21 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAEPIDIB_01728 2e-21 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAEPIDIB_01729 7.3e-65 degV S Uncharacterised protein, DegV family COG1307
PAEPIDIB_01731 4.3e-54 queT S QueT transporter
PAEPIDIB_01732 2.5e-33 XK27_01315 S Protein of unknown function (DUF2829)
PAEPIDIB_01733 5e-102 IQ Enoyl-(Acyl carrier protein) reductase
PAEPIDIB_01734 3.9e-111 argE 3.5.1.18 E Peptidase dimerisation domain
PAEPIDIB_01735 2.5e-174 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAEPIDIB_01736 1.6e-94 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAEPIDIB_01737 1.3e-87 S Alpha beta hydrolase
PAEPIDIB_01738 1.6e-43 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAEPIDIB_01739 3.6e-140 V MatE
PAEPIDIB_01740 1.4e-156 gmuE 2.7.1.2, 2.7.1.4 GK ROK family
PAEPIDIB_01741 4.2e-62 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAEPIDIB_01742 9.6e-97 V ABC transporter
PAEPIDIB_01743 9.6e-132 bacI V MacB-like periplasmic core domain
PAEPIDIB_01744 3.7e-75 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAEPIDIB_01745 4.8e-26
PAEPIDIB_01746 3e-179 yhdP S Transporter associated domain
PAEPIDIB_01747 6e-79 ptp2 3.1.3.48 T Tyrosine phosphatase family
PAEPIDIB_01748 0.0 L Helicase C-terminal domain protein
PAEPIDIB_01749 9.6e-251 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAEPIDIB_01750 6.3e-212 yfnA E Amino Acid
PAEPIDIB_01751 5.4e-53 zur P Belongs to the Fur family
PAEPIDIB_01752 3e-12 3.2.1.14 GH18
PAEPIDIB_01753 5e-98
PAEPIDIB_01754 1.3e-09
PAEPIDIB_01755 3.7e-102 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAEPIDIB_01756 1.9e-99 glnH ET ABC transporter
PAEPIDIB_01757 1.2e-85 gluC P ABC transporter permease
PAEPIDIB_01758 9.6e-78 glnP P ABC transporter permease
PAEPIDIB_01759 9e-184 steT E amino acid
PAEPIDIB_01760 6.5e-21 K Acetyltransferase (GNAT) domain
PAEPIDIB_01761 3.2e-146 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PAEPIDIB_01762 2.6e-54 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PAEPIDIB_01763 2.5e-78 K rpiR family
PAEPIDIB_01764 4.3e-167 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAEPIDIB_01765 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PAEPIDIB_01766 4.5e-109 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAEPIDIB_01767 1e-100 rplD J Forms part of the polypeptide exit tunnel
PAEPIDIB_01768 2.9e-39 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAEPIDIB_01769 4.1e-142 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAEPIDIB_01770 1e-44 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAEPIDIB_01771 1.5e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAEPIDIB_01772 5.2e-116 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAEPIDIB_01773 6.2e-73 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAEPIDIB_01774 9e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PAEPIDIB_01775 8e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAEPIDIB_01776 5.1e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAEPIDIB_01777 7e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAEPIDIB_01778 1.3e-91 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAEPIDIB_01779 4.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAEPIDIB_01780 2.5e-65 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAEPIDIB_01781 3.2e-87 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAEPIDIB_01782 9.6e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAEPIDIB_01783 1.3e-82 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAEPIDIB_01784 2.1e-22 rpmD J Ribosomal protein L30
PAEPIDIB_01785 1e-67 rplO J Binds to the 23S rRNA
PAEPIDIB_01786 4.4e-207 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAEPIDIB_01787 3.4e-107 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAEPIDIB_01788 4.8e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAEPIDIB_01789 2.5e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PAEPIDIB_01790 4.4e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAEPIDIB_01791 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAEPIDIB_01792 1.3e-155 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAEPIDIB_01793 4.8e-53 rplQ J Ribosomal protein L17
PAEPIDIB_01794 1.8e-100 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAEPIDIB_01795 6.7e-111 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAEPIDIB_01796 2.8e-108 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAEPIDIB_01797 2.5e-125 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAEPIDIB_01798 5.5e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAEPIDIB_01799 1.1e-60 rpsI J Belongs to the universal ribosomal protein uS9 family
PAEPIDIB_01800 2e-80 S response to antibiotic
PAEPIDIB_01801 9.8e-27 S zinc-ribbon domain
PAEPIDIB_01802 9.4e-118 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
PAEPIDIB_01803 9.9e-128 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAEPIDIB_01804 6.2e-164 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PAEPIDIB_01805 4.2e-101 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PAEPIDIB_01806 1.2e-144 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAEPIDIB_01807 1.3e-75 S Glycosyltransferase like family 2
PAEPIDIB_01808 2.5e-61 S Glycosyltransferase like family 2
PAEPIDIB_01809 2.6e-117 cps1D M Domain of unknown function (DUF4422)
PAEPIDIB_01810 3e-39 S CAAX protease self-immunity
PAEPIDIB_01811 9.1e-89 yvyE 3.4.13.9 S YigZ family
PAEPIDIB_01812 2.3e-58 S Haloacid dehalogenase-like hydrolase
PAEPIDIB_01813 2.9e-153 EGP Major facilitator Superfamily
PAEPIDIB_01815 5.3e-68 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PAEPIDIB_01816 1.2e-27 yraB K transcriptional regulator
PAEPIDIB_01817 9.8e-90 S NADPH-dependent FMN reductase
PAEPIDIB_01818 1e-102 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PAEPIDIB_01819 1.5e-55 S ECF transporter, substrate-specific component
PAEPIDIB_01820 2.5e-96 znuB U ABC 3 transport family
PAEPIDIB_01821 1e-98 fhuC P ABC transporter
PAEPIDIB_01822 1e-103 psaA P Belongs to the bacterial solute-binding protein 9 family
PAEPIDIB_01823 7.6e-38
PAEPIDIB_01824 6.5e-54 XK27_01040 S Protein of unknown function (DUF1129)
PAEPIDIB_01825 5.4e-190 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAEPIDIB_01826 3.4e-23 yyzM S Bacterial protein of unknown function (DUF951)
PAEPIDIB_01827 1.8e-108 spo0J K Belongs to the ParB family
PAEPIDIB_01828 6.5e-118 soj D Sporulation initiation inhibitor
PAEPIDIB_01829 4.8e-82 noc K Belongs to the ParB family
PAEPIDIB_01830 4e-101 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PAEPIDIB_01831 1.2e-126 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PAEPIDIB_01832 2.4e-109 3.1.4.46 C phosphodiesterase
PAEPIDIB_01833 0.0 pacL 3.6.3.8 P P-type ATPase
PAEPIDIB_01834 3.4e-185 L Probable transposase
PAEPIDIB_01835 1.3e-61 yvdD 3.2.2.10 S Possible lysine decarboxylase
PAEPIDIB_01836 1.8e-72 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PAEPIDIB_01838 2.3e-63 srtA 3.4.22.70 M sortase family
PAEPIDIB_01839 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PAEPIDIB_01840 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PAEPIDIB_01841 1.1e-33
PAEPIDIB_01842 1.8e-141 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAEPIDIB_01843 1e-157 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PAEPIDIB_01844 1.5e-96 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAEPIDIB_01845 4.7e-158 manA 5.3.1.8 G mannose-6-phosphate isomerase
PAEPIDIB_01846 1.1e-39 ybjQ S Belongs to the UPF0145 family
PAEPIDIB_01847 2.5e-08
PAEPIDIB_01848 3e-95 V ABC transporter, ATP-binding protein
PAEPIDIB_01849 1.1e-41 gntR1 K Transcriptional regulator, GntR family
PAEPIDIB_01850 6.4e-186 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PAEPIDIB_01851 2.8e-65 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAEPIDIB_01852 4.2e-261 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PAEPIDIB_01853 2.2e-107 terC P Integral membrane protein TerC family
PAEPIDIB_01854 1.6e-38 K Transcriptional regulator
PAEPIDIB_01855 1.3e-95 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PAEPIDIB_01856 5.4e-101 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PAEPIDIB_01857 4.5e-102 tcyB E ABC transporter
PAEPIDIB_01859 3.2e-29 ponA V the current gene model (or a revised gene model) may contain a frame shift
PAEPIDIB_01860 6.1e-188 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PAEPIDIB_01861 5.9e-303 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAEPIDIB_01862 1.6e-51 mtlR K Mga helix-turn-helix domain
PAEPIDIB_01863 8.6e-65 oppA E ABC transporter, substratebinding protein
PAEPIDIB_01864 1e-141 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAEPIDIB_01865 5.8e-170 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAEPIDIB_01866 1.3e-180 oppD P Belongs to the ABC transporter superfamily
PAEPIDIB_01867 3.7e-155 oppF P Belongs to the ABC transporter superfamily
PAEPIDIB_01868 1.2e-15 psiE S Phosphate-starvation-inducible E
PAEPIDIB_01869 2.2e-209 mmuP E amino acid
PAEPIDIB_01870 7.6e-113 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PAEPIDIB_01871 4.5e-39 K LytTr DNA-binding domain
PAEPIDIB_01872 2.5e-16 S Protein of unknown function (DUF3021)
PAEPIDIB_01873 1.2e-150 yfeX P Peroxidase
PAEPIDIB_01874 1.8e-30 tetR K Transcriptional regulator C-terminal region
PAEPIDIB_01875 3.1e-47 S Short repeat of unknown function (DUF308)
PAEPIDIB_01876 6.2e-53 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAEPIDIB_01877 8.1e-163 oxlT P Major Facilitator Superfamily
PAEPIDIB_01878 2e-67 ybbL S ABC transporter
PAEPIDIB_01879 1.9e-101 ybbM S Uncharacterised protein family (UPF0014)
PAEPIDIB_01880 4.2e-43 ytcD K HxlR-like helix-turn-helix
PAEPIDIB_01881 6.9e-121 ytbE S reductase
PAEPIDIB_01882 7.5e-72 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAEPIDIB_01884 6.4e-96 XK27_06785 V ABC transporter, ATP-binding protein
PAEPIDIB_01885 1.2e-253 XK27_06780 V ABC transporter permease
PAEPIDIB_01887 5.1e-42 wecD K Acetyltransferase GNAT Family
PAEPIDIB_01888 3.9e-47 hmpT S ECF-type riboflavin transporter, S component
PAEPIDIB_01889 2.1e-69 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PAEPIDIB_01890 1.7e-09 yvaZ S Protein of unknown function (DUF1648)
PAEPIDIB_01891 1.7e-111 dat 2.6.1.21 EH PFAM aminotransferase, class IV
PAEPIDIB_01892 3.4e-285 pepO 3.4.24.71 O Peptidase family M13
PAEPIDIB_01893 7.7e-44 thiT S Thiamine transporter protein (Thia_YuaJ)
PAEPIDIB_01894 6.9e-54 K Transcriptional regulator C-terminal region
PAEPIDIB_01897 1.1e-08
PAEPIDIB_01899 1e-76 S DNA primase
PAEPIDIB_01900 3.1e-43 L Bifunctional DNA primase/polymerase, N-terminal
PAEPIDIB_01901 6.7e-15
PAEPIDIB_01906 6.8e-39 K COG3617 Prophage antirepressor
PAEPIDIB_01908 6.9e-08 S Helix-turn-helix domain
PAEPIDIB_01909 1.4e-24 K Cro/C1-type HTH DNA-binding domain
PAEPIDIB_01910 1.2e-123 sip L Belongs to the 'phage' integrase family
PAEPIDIB_01911 1.6e-55 jag S R3H domain protein
PAEPIDIB_01912 1.5e-56 ohrR K helix_turn_helix multiple antibiotic resistance protein
PAEPIDIB_01913 2e-31 azlD S Branched-chain amino acid transport protein (AzlD)
PAEPIDIB_01914 2e-76 azlC E branched-chain amino acid
PAEPIDIB_01915 5.5e-59 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PAEPIDIB_01916 9.4e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PAEPIDIB_01917 3e-293 lai 4.2.1.53 S Myosin-crossreactive antigen
PAEPIDIB_01918 3.8e-33 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PAEPIDIB_01919 1.1e-193 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PAEPIDIB_01920 4.1e-75 XK27_02070 S Nitroreductase family
PAEPIDIB_01921 1.7e-111 endA F DNA RNA non-specific endonuclease
PAEPIDIB_01922 5.9e-210 brnQ U Component of the transport system for branched-chain amino acids
PAEPIDIB_01923 6.5e-61 K Bacterial regulatory proteins, tetR family
PAEPIDIB_01924 1.9e-114 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PAEPIDIB_01925 2e-151 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PAEPIDIB_01926 9.5e-69 dhaL 2.7.1.121 S Dak2
PAEPIDIB_01927 4e-49 dhaM 2.7.1.121 S PTS system fructose IIA component
PAEPIDIB_01928 8.4e-104 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PAEPIDIB_01929 9.8e-177 yjcE P Sodium proton antiporter

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)