ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDCMJDCM_00002 1.6e-197 dtpT U amino acid peptide transporter
PDCMJDCM_00003 1.1e-07
PDCMJDCM_00005 5.9e-90 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDCMJDCM_00006 4.9e-96 gntR1 K UbiC transcription regulator-associated domain protein
PDCMJDCM_00007 2.5e-90 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PDCMJDCM_00008 3.3e-243 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDCMJDCM_00009 3.6e-130 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDCMJDCM_00010 8.2e-251 yhgF K Tex-like protein N-terminal domain protein
PDCMJDCM_00011 7.2e-45 ydcK S Belongs to the SprT family
PDCMJDCM_00013 1.3e-115 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDCMJDCM_00014 5.9e-129 mleP2 S Sodium Bile acid symporter family
PDCMJDCM_00015 4.9e-85 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDCMJDCM_00016 1e-33 S Enterocin A Immunity
PDCMJDCM_00017 7.6e-223 pepC 3.4.22.40 E Peptidase C1-like family
PDCMJDCM_00018 4.3e-19 HA62_12640 S GCN5-related N-acetyl-transferase
PDCMJDCM_00019 4e-74 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PDCMJDCM_00020 5.4e-224 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDCMJDCM_00021 8.2e-154 yacL S domain protein
PDCMJDCM_00022 2.9e-247 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDCMJDCM_00023 1.8e-206 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDCMJDCM_00024 6.4e-56 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDCMJDCM_00025 3.2e-109 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDCMJDCM_00026 7.8e-70 yacP S YacP-like NYN domain
PDCMJDCM_00027 2.1e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDCMJDCM_00028 2.6e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDCMJDCM_00029 7.7e-84 nusG K Participates in transcription elongation, termination and antitermination
PDCMJDCM_00030 5e-67 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDCMJDCM_00031 1.6e-115 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDCMJDCM_00032 7.6e-75 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDCMJDCM_00033 2.6e-48 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDCMJDCM_00034 1.4e-54
PDCMJDCM_00035 4.6e-301 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDCMJDCM_00036 1e-160 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDCMJDCM_00037 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDCMJDCM_00038 4.8e-45 nrdI F NrdI Flavodoxin like
PDCMJDCM_00039 1.2e-27 nrdH O Glutaredoxin
PDCMJDCM_00040 3.2e-75 rsmC 2.1.1.172 J Methyltransferase
PDCMJDCM_00041 3.3e-62 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDCMJDCM_00042 5.6e-210 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDCMJDCM_00043 7e-34 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDCMJDCM_00044 2.2e-97 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDCMJDCM_00045 9.2e-29 yaaL S Protein of unknown function (DUF2508)
PDCMJDCM_00046 1.4e-65 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDCMJDCM_00047 3.9e-83 holB 2.7.7.7 L DNA polymerase III
PDCMJDCM_00048 1.4e-40 yabA L Involved in initiation control of chromosome replication
PDCMJDCM_00049 4.1e-92 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDCMJDCM_00050 4.7e-81 fat 3.1.2.21 I Acyl-ACP thioesterase
PDCMJDCM_00051 3.5e-140 ansA 3.5.1.1 EJ Asparaginase
PDCMJDCM_00052 3.7e-70 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PDCMJDCM_00053 4.3e-28 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PDCMJDCM_00054 8.4e-161 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDCMJDCM_00055 1.5e-256 uup S ABC transporter, ATP-binding protein
PDCMJDCM_00056 2.8e-98 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDCMJDCM_00057 1.4e-33 S CAAX protease self-immunity
PDCMJDCM_00058 2.4e-33 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDCMJDCM_00059 8.3e-272 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDCMJDCM_00060 2.5e-269 aha1 P COG COG0474 Cation transport ATPase
PDCMJDCM_00061 2.1e-295 ydaO E amino acid
PDCMJDCM_00062 1.6e-157 tagO 2.7.8.33, 2.7.8.35 M transferase
PDCMJDCM_00063 3.2e-128 comFA L Helicase C-terminal domain protein
PDCMJDCM_00064 5.6e-44 comFC S Competence protein
PDCMJDCM_00065 6e-81 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDCMJDCM_00066 7e-95 yeaN P Major Facilitator Superfamily
PDCMJDCM_00067 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDCMJDCM_00068 1.9e-163 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDCMJDCM_00069 9.1e-68 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PDCMJDCM_00070 6e-86 K response regulator
PDCMJDCM_00071 1.2e-85 phoR 2.7.13.3 T Histidine kinase
PDCMJDCM_00072 2.4e-08 pspC KT PspC domain
PDCMJDCM_00073 1e-25 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PDCMJDCM_00074 8.7e-133 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDCMJDCM_00075 1.1e-112 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDCMJDCM_00076 6.1e-273 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDCMJDCM_00077 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDCMJDCM_00078 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDCMJDCM_00079 1.1e-83 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDCMJDCM_00080 5e-79 ylbE GM NAD dependent epimerase dehydratase family protein
PDCMJDCM_00081 7.5e-126 rapZ S Displays ATPase and GTPase activities
PDCMJDCM_00082 8.2e-153 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PDCMJDCM_00083 1.8e-149 whiA K May be required for sporulation
PDCMJDCM_00084 1.1e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDCMJDCM_00086 1.1e-136 cggR K Putative sugar-binding domain
PDCMJDCM_00087 6.1e-180 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDCMJDCM_00088 1.3e-208 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PDCMJDCM_00089 2.3e-128 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDCMJDCM_00090 9.5e-234 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDCMJDCM_00091 2.2e-132 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDCMJDCM_00092 5e-104 K response regulator
PDCMJDCM_00093 1.8e-169 T PhoQ Sensor
PDCMJDCM_00094 6.7e-146 lmrP E Major Facilitator Superfamily
PDCMJDCM_00095 1.2e-179 clcA P chloride
PDCMJDCM_00096 2.8e-19 secG U Preprotein translocase
PDCMJDCM_00097 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDCMJDCM_00098 6.9e-70 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDCMJDCM_00099 9.1e-42 yxjI
PDCMJDCM_00100 2.4e-116 ycsE S Sucrose-6F-phosphate phosphohydrolase
PDCMJDCM_00101 5.2e-106 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDCMJDCM_00102 2e-143 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDCMJDCM_00103 3.2e-56 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PDCMJDCM_00104 1.9e-68 dnaQ 2.7.7.7 L DNA polymerase III
PDCMJDCM_00105 3.5e-115 murB 1.3.1.98 M Cell wall formation
PDCMJDCM_00106 2.4e-71 S Protein of unknown function (DUF1361)
PDCMJDCM_00107 8.5e-127 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDCMJDCM_00108 5.3e-68 ybbR S YbbR-like protein
PDCMJDCM_00109 2.6e-226 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDCMJDCM_00110 7.5e-29 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDCMJDCM_00111 4e-131 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PDCMJDCM_00112 3.2e-21 cutC P Participates in the control of copper homeostasis
PDCMJDCM_00113 4e-197 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDCMJDCM_00114 5.9e-164 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDCMJDCM_00115 4.9e-61 ybaK J Aminoacyl-tRNA editing domain
PDCMJDCM_00116 1.7e-98 rrmA 2.1.1.187 H Methyltransferase
PDCMJDCM_00117 4.4e-86 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDCMJDCM_00118 1.6e-284 ftsK D Belongs to the FtsK SpoIIIE SftA family
PDCMJDCM_00119 4.8e-54 ymfF S Peptidase M16 inactive domain protein
PDCMJDCM_00120 6.1e-45 ymfF S Peptidase M16 inactive domain protein
PDCMJDCM_00121 1.3e-147 ymfH S Peptidase M16
PDCMJDCM_00122 8.4e-91 IQ Enoyl-(Acyl carrier protein) reductase
PDCMJDCM_00123 2.9e-64 ymfM S Helix-turn-helix domain
PDCMJDCM_00124 4.3e-85 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDCMJDCM_00125 2.3e-159 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDCMJDCM_00126 2.6e-182 rny S Endoribonuclease that initiates mRNA decay
PDCMJDCM_00127 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDCMJDCM_00128 6e-224 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDCMJDCM_00129 7.3e-72 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDCMJDCM_00130 6.3e-153 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDCMJDCM_00131 2.1e-183 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PDCMJDCM_00132 2.9e-207 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDCMJDCM_00133 1.8e-12 yajC U Preprotein translocase
PDCMJDCM_00135 4.3e-61 uspA T universal stress protein
PDCMJDCM_00137 2e-208 yfnA E Amino Acid
PDCMJDCM_00138 6.9e-117 lutA C Cysteine-rich domain
PDCMJDCM_00139 2.1e-245 lutB C 4Fe-4S dicluster domain
PDCMJDCM_00140 1.9e-66 yrjD S LUD domain
PDCMJDCM_00141 1e-146 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDCMJDCM_00142 7.5e-13
PDCMJDCM_00143 2.7e-121 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PDCMJDCM_00144 6.7e-187 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDCMJDCM_00145 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDCMJDCM_00146 2.1e-36 yrzL S Belongs to the UPF0297 family
PDCMJDCM_00147 2.3e-59 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDCMJDCM_00148 1.9e-33 yrzB S Belongs to the UPF0473 family
PDCMJDCM_00149 1.4e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PDCMJDCM_00150 9.5e-18 cvpA S Colicin V production protein
PDCMJDCM_00151 3.9e-310 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDCMJDCM_00152 9.9e-41 trxA O Belongs to the thioredoxin family
PDCMJDCM_00153 1.1e-60 yslB S Protein of unknown function (DUF2507)
PDCMJDCM_00154 2.2e-73 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDCMJDCM_00155 5.1e-42 S Phosphoesterase
PDCMJDCM_00158 1.2e-140 hprA 1.1.1.29 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDCMJDCM_00159 2.8e-305 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDCMJDCM_00160 2.2e-214 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDCMJDCM_00161 4.8e-199 oatA I Acyltransferase
PDCMJDCM_00162 1.4e-16
PDCMJDCM_00164 8.9e-141 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDCMJDCM_00165 6.5e-100 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PDCMJDCM_00166 4e-219 recJ L Single-stranded-DNA-specific exonuclease RecJ
PDCMJDCM_00167 1.3e-80 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDCMJDCM_00168 1.2e-296 S membrane
PDCMJDCM_00169 1.5e-278 pbp2b 3.4.16.4 M Penicillin-binding Protein
PDCMJDCM_00170 1.8e-27 S Protein of unknown function (DUF3290)
PDCMJDCM_00171 3.3e-75 yviA S Protein of unknown function (DUF421)
PDCMJDCM_00173 4.5e-125 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDCMJDCM_00174 7.7e-200 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDCMJDCM_00175 1.1e-53 tag 3.2.2.20 L glycosylase
PDCMJDCM_00176 6e-72 usp6 T universal stress protein
PDCMJDCM_00178 5.1e-184 rarA L recombination factor protein RarA
PDCMJDCM_00179 3.4e-24 yueI S Protein of unknown function (DUF1694)
PDCMJDCM_00180 7.5e-101 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDCMJDCM_00181 4.2e-56 ytsP 1.8.4.14 T GAF domain-containing protein
PDCMJDCM_00182 5.8e-175 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDCMJDCM_00183 6.4e-162 iscS2 2.8.1.7 E Aminotransferase class V
PDCMJDCM_00184 1.9e-196 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDCMJDCM_00185 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDCMJDCM_00186 3.7e-137 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDCMJDCM_00187 8.1e-80 radC L DNA repair protein
PDCMJDCM_00188 4.5e-21 K Cold shock
PDCMJDCM_00189 3.6e-156 mreB D cell shape determining protein MreB
PDCMJDCM_00190 2.1e-88 mreC M Involved in formation and maintenance of cell shape
PDCMJDCM_00191 2e-54 mreD M rod shape-determining protein MreD
PDCMJDCM_00192 8.3e-77 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PDCMJDCM_00193 1.8e-126 minD D Belongs to the ParA family
PDCMJDCM_00194 1.9e-94 glnP P ABC transporter permease
PDCMJDCM_00195 1.8e-89 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDCMJDCM_00196 3.7e-109 aatB ET ABC transporter substrate-binding protein
PDCMJDCM_00197 9.8e-100 D Alpha beta
PDCMJDCM_00199 1.2e-155 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PDCMJDCM_00200 2.2e-07 S Protein of unknown function (DUF3397)
PDCMJDCM_00201 1.5e-55 mraZ K Belongs to the MraZ family
PDCMJDCM_00202 8e-142 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDCMJDCM_00203 2.5e-11 ftsL D cell division protein FtsL
PDCMJDCM_00204 4e-282 ftsI 3.4.16.4 M Penicillin-binding Protein
PDCMJDCM_00205 8.7e-136 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDCMJDCM_00206 2.2e-185 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDCMJDCM_00207 1.8e-153 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDCMJDCM_00208 1.3e-61 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDCMJDCM_00209 5.2e-190 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDCMJDCM_00210 9.8e-180 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDCMJDCM_00211 5e-33 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDCMJDCM_00212 3e-19 yggT S YGGT family
PDCMJDCM_00213 1.7e-81 ylmH S S4 domain protein
PDCMJDCM_00214 1.1e-61 divIVA D DivIVA domain protein
PDCMJDCM_00215 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDCMJDCM_00216 2.5e-102 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDCMJDCM_00217 1.3e-73 draG O ADP-ribosylglycohydrolase
PDCMJDCM_00219 5.7e-85 2.7.7.12 C Domain of unknown function (DUF4931)
PDCMJDCM_00220 1.4e-92 T Calcineurin-like phosphoesterase superfamily domain
PDCMJDCM_00221 5.5e-49 lytE M LysM domain protein
PDCMJDCM_00222 5e-19 glpE P Rhodanese Homology Domain
PDCMJDCM_00223 2.4e-27 xlyB 3.5.1.28 CBM50 M LysM domain
PDCMJDCM_00224 6.9e-160 asnA 6.3.1.1 F aspartate--ammonia ligase
PDCMJDCM_00225 1e-193 cydA 1.10.3.14 C ubiquinol oxidase
PDCMJDCM_00226 2.5e-141 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PDCMJDCM_00227 2.7e-204 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PDCMJDCM_00228 3.6e-220 cydD CO ABC transporter transmembrane region
PDCMJDCM_00229 1.1e-96 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDCMJDCM_00230 1.5e-105 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PDCMJDCM_00231 6.6e-157 ndh 1.6.99.3 C NADH dehydrogenase
PDCMJDCM_00232 1.5e-146 pbuO_1 S Permease family
PDCMJDCM_00234 2.4e-32 2.7.7.65 T GGDEF domain
PDCMJDCM_00235 1.7e-129 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
PDCMJDCM_00236 1.4e-182
PDCMJDCM_00237 5.8e-206 S Protein conserved in bacteria
PDCMJDCM_00238 1.2e-201 ydaM M Glycosyl transferase family group 2
PDCMJDCM_00239 0.0 ydaN S Bacterial cellulose synthase subunit
PDCMJDCM_00240 2.4e-113 2.7.7.65 T diguanylate cyclase activity
PDCMJDCM_00241 1.7e-38 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
PDCMJDCM_00242 1.9e-50 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PDCMJDCM_00243 6.9e-309 L Helicase C-terminal domain protein
PDCMJDCM_00244 0.0 rafA 3.2.1.22 G alpha-galactosidase
PDCMJDCM_00245 8.9e-54 S Membrane
PDCMJDCM_00246 3.5e-64 K helix_turn_helix, arabinose operon control protein
PDCMJDCM_00247 2.3e-45
PDCMJDCM_00248 1.3e-204 pipD E Dipeptidase
PDCMJDCM_00249 1.1e-23 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PDCMJDCM_00250 2e-191 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDCMJDCM_00251 4.5e-60 speG J Acetyltransferase (GNAT) domain
PDCMJDCM_00252 2.3e-113 yitU 3.1.3.104 S hydrolase
PDCMJDCM_00253 1.6e-79 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PDCMJDCM_00254 4.8e-81
PDCMJDCM_00255 2e-178 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PDCMJDCM_00256 6.7e-42 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PDCMJDCM_00257 1.4e-48 cps4C M Chain length determinant protein
PDCMJDCM_00258 9.4e-65 cpsD D AAA domain
PDCMJDCM_00259 1.2e-221 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 M Psort location CytoplasmicMembrane, score
PDCMJDCM_00260 9.1e-167 2.6.1.102 M Belongs to the DegT DnrJ EryC1 family
PDCMJDCM_00261 4.8e-77 epsL M Bacterial sugar transferase
PDCMJDCM_00262 2.2e-25 pglD 2.3.1.203 S Bacterial transferase hexapeptide (six repeats)
PDCMJDCM_00263 5.3e-121 2.4.1.52 GT4 M Glycosyl transferases group 1
PDCMJDCM_00265 3.7e-68 gtf1 2.4.1.52 GT4 M glycosyl transferase group 1
PDCMJDCM_00266 1.5e-75 M Glycosyltransferase Family 4
PDCMJDCM_00267 1e-42 GT2 V Glycosyl transferase, family 2
PDCMJDCM_00268 2.5e-57 pglI 2.4.1.293 GT2 M Glycosyltransferase like family 2
PDCMJDCM_00270 2.7e-52
PDCMJDCM_00271 2.6e-115 S Glycosyltransferase WbsX
PDCMJDCM_00272 3.5e-61 cps1B GT2,GT4 M Glycosyl transferases group 1
PDCMJDCM_00273 2.2e-104 cps2I S Psort location CytoplasmicMembrane, score
PDCMJDCM_00274 2.1e-146 lspL 5.1.3.6 GM RmlD substrate binding domain
PDCMJDCM_00275 3.7e-179 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PDCMJDCM_00276 3.4e-64 M Glycosyl transferases group 1
PDCMJDCM_00277 5.6e-126 M Glycosyl transferases group 1
PDCMJDCM_00280 3.4e-83 qorB 1.6.5.2 GM NmrA-like family
PDCMJDCM_00281 2.1e-39 K Transcriptional regulator
PDCMJDCM_00282 4.5e-30 S CHY zinc finger
PDCMJDCM_00283 5e-86 1.1.1.1 C Zinc-binding dehydrogenase
PDCMJDCM_00285 4.4e-41 S Protein of unknown function (DUF1211)
PDCMJDCM_00286 1.4e-25 ybl78 L Conserved phage C-terminus (Phg_2220_C)
PDCMJDCM_00288 2.5e-41 wecD M Acetyltransferase (GNAT) family
PDCMJDCM_00289 3.8e-75 cps2D 5.1.3.2 M RmlD substrate binding domain
PDCMJDCM_00290 1.2e-65 H Methyltransferase domain
PDCMJDCM_00292 1.3e-16 K DNA-templated transcription, initiation
PDCMJDCM_00294 2.2e-08 S Protein of unknown function (DUF2922)
PDCMJDCM_00297 8.3e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDCMJDCM_00298 1e-27 ysxB J Cysteine protease Prp
PDCMJDCM_00299 1.6e-42 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PDCMJDCM_00300 4.7e-09 M LysM domain
PDCMJDCM_00303 5e-07 S Domain of unknown function (DUF4343)
PDCMJDCM_00304 1.8e-58
PDCMJDCM_00305 1.2e-100 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PDCMJDCM_00306 1.3e-178 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PDCMJDCM_00307 6e-123 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PDCMJDCM_00308 7e-79 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PDCMJDCM_00309 7.8e-218 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PDCMJDCM_00310 4.6e-37 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDCMJDCM_00311 4.5e-58 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDCMJDCM_00312 1.1e-56 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDCMJDCM_00313 5.8e-100 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDCMJDCM_00314 4.5e-58 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDCMJDCM_00315 1.3e-42 yeaL S Protein of unknown function (DUF441)
PDCMJDCM_00316 4.8e-125 cvfB S S1 domain
PDCMJDCM_00317 7.3e-113 xerD D recombinase XerD
PDCMJDCM_00318 1.1e-293 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PDCMJDCM_00319 1.8e-76 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDCMJDCM_00320 4.4e-189 nhaC C Na H antiporter NhaC
PDCMJDCM_00321 1e-64 ypsA S Belongs to the UPF0398 family
PDCMJDCM_00322 1.2e-196 ade 3.5.4.2 F Adenine deaminase C-terminal domain
PDCMJDCM_00324 4.4e-74 2.3.1.178 M GNAT acetyltransferase
PDCMJDCM_00325 2.3e-68 maa 2.3.1.79 S Maltose acetyltransferase
PDCMJDCM_00326 2.8e-56 3.6.1.27 I Acid phosphatase homologues
PDCMJDCM_00327 4.9e-22 XK27_07525 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
PDCMJDCM_00329 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PDCMJDCM_00330 5.2e-202 hsdM 2.1.1.72 V type I restriction-modification system
PDCMJDCM_00331 1.5e-58 3.1.21.3 V Type I restriction modification DNA specificity domain
PDCMJDCM_00332 1.6e-131 L Belongs to the 'phage' integrase family
PDCMJDCM_00333 2.6e-96 3.1.21.3 V Type I restriction modification DNA specificity domain
PDCMJDCM_00334 2.8e-104 3.1.21.3 V Type I restriction modification DNA specificity domain
PDCMJDCM_00335 9.7e-69 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDCMJDCM_00336 9.9e-110 pepE 3.4.13.21 E Alpha/beta hydrolase of unknown function (DUF915)
PDCMJDCM_00337 2.7e-72 K Transcriptional regulator
PDCMJDCM_00338 1.1e-124 akr5f 1.1.1.346 S reductase
PDCMJDCM_00339 3.3e-117 EGP Major Facilitator Superfamily
PDCMJDCM_00340 3.7e-168 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PDCMJDCM_00341 8.1e-280 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PDCMJDCM_00342 1.7e-212 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDCMJDCM_00343 2.8e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDCMJDCM_00345 2.8e-91 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDCMJDCM_00346 4.8e-44
PDCMJDCM_00347 7.1e-120 ica2 GT2 M Glycosyl transferase family group 2
PDCMJDCM_00348 1.3e-44 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PDCMJDCM_00349 2.9e-221 mntH P H( )-stimulated, divalent metal cation uptake system
PDCMJDCM_00350 7.1e-59 ypbB 5.1.3.1 S Helix-turn-helix domain
PDCMJDCM_00351 9.1e-129 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDCMJDCM_00352 5.9e-12 M Lysin motif
PDCMJDCM_00353 2e-86 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PDCMJDCM_00354 7.5e-83 lytH 3.5.1.28 M Ami_3
PDCMJDCM_00355 3.5e-153 phoH T phosphate starvation-inducible protein PhoH
PDCMJDCM_00356 3e-60 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDCMJDCM_00357 3.6e-30 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PDCMJDCM_00358 1e-154 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDCMJDCM_00359 4.5e-90 recO L Involved in DNA repair and RecF pathway recombination
PDCMJDCM_00360 2.6e-07 dltX S D-Ala-teichoic acid biosynthesis protein
PDCMJDCM_00361 5.8e-219 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDCMJDCM_00362 1.4e-175 dltB M MBOAT, membrane-bound O-acyltransferase family
PDCMJDCM_00363 4.9e-29 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDCMJDCM_00364 2e-151 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDCMJDCM_00365 9.1e-58 arsC 1.20.4.1 T Low molecular weight phosphatase family
PDCMJDCM_00366 2.7e-171 rpsA 1.17.7.4 J Ribosomal protein S1
PDCMJDCM_00367 4.5e-228 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PDCMJDCM_00368 8.5e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDCMJDCM_00370 4.8e-23 K Acetyltransferase (GNAT) domain
PDCMJDCM_00371 6.2e-112 natA S Domain of unknown function (DUF4162)
PDCMJDCM_00372 2.3e-85 natB CP ABC-type Na efflux pump, permease component
PDCMJDCM_00373 3.1e-95 EG EamA-like transporter family
PDCMJDCM_00374 1.7e-79 yjjH S Calcineurin-like phosphoesterase
PDCMJDCM_00375 1.3e-187 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDCMJDCM_00376 2.4e-40 6.3.3.2 S ASCH
PDCMJDCM_00377 7.8e-71 lepB 3.4.21.89 U Signal peptidase, peptidase S26
PDCMJDCM_00378 2.2e-117 degV S EDD domain protein, DegV family
PDCMJDCM_00379 3.1e-40 K Transcriptional regulator
PDCMJDCM_00380 1.2e-196 FbpA K Fibronectin-binding protein
PDCMJDCM_00381 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDCMJDCM_00382 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDCMJDCM_00383 5.5e-83 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDCMJDCM_00384 5e-39 ypaA S Protein of unknown function (DUF1304)
PDCMJDCM_00386 6.3e-310 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PDCMJDCM_00387 1.9e-167 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDCMJDCM_00388 0.0 dnaE 2.7.7.7 L DNA polymerase
PDCMJDCM_00389 4.3e-15 S Protein of unknown function (DUF2929)
PDCMJDCM_00390 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDCMJDCM_00391 4.3e-203 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDCMJDCM_00392 3.7e-41 XK27_04120 S Putative amino acid metabolism
PDCMJDCM_00393 2.9e-154 iscS 2.8.1.7 E Aminotransferase class V
PDCMJDCM_00394 7.2e-92 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDCMJDCM_00396 5.8e-81 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PDCMJDCM_00397 1.5e-130 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDCMJDCM_00398 8.5e-161 nhaC C Na H antiporter NhaC
PDCMJDCM_00399 7e-127 corA P CorA-like Mg2+ transporter protein
PDCMJDCM_00400 4.3e-298 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDCMJDCM_00401 6.9e-205 hisS 6.1.1.21 J histidyl-tRNA synthetase
PDCMJDCM_00402 3.6e-150 S Tetratricopeptide repeat protein
PDCMJDCM_00403 3.8e-136 EG EamA-like transporter family
PDCMJDCM_00404 4.2e-73 alkD L DNA alkylation repair enzyme
PDCMJDCM_00405 1.9e-183 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDCMJDCM_00406 4.8e-103 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDCMJDCM_00407 6e-78 trmK 2.1.1.217 S SAM-dependent methyltransferase
PDCMJDCM_00408 2.5e-149 EGP Sugar (and other) transporter
PDCMJDCM_00411 1.8e-38
PDCMJDCM_00412 5.5e-255 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PDCMJDCM_00413 6.2e-21 S Family of unknown function (DUF5322)
PDCMJDCM_00414 1.8e-36 rnhA 3.1.26.4 L Ribonuclease HI
PDCMJDCM_00415 2.7e-173 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PDCMJDCM_00416 1.1e-35 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDCMJDCM_00418 2.4e-88 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDCMJDCM_00419 4.5e-171 patA 2.6.1.1 E Aminotransferase
PDCMJDCM_00420 8.6e-115 glcR K DeoR C terminal sensor domain
PDCMJDCM_00421 8.3e-144 ppaC 3.6.1.1 C inorganic pyrophosphatase
PDCMJDCM_00422 1.2e-134 K Transcriptional regulator
PDCMJDCM_00423 2.3e-89 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDCMJDCM_00424 1.5e-84 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDCMJDCM_00425 5.9e-192 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDCMJDCM_00426 4.3e-115 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDCMJDCM_00427 2.7e-204 pyrP F Permease
PDCMJDCM_00428 1.3e-75 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDCMJDCM_00429 7.3e-129 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDCMJDCM_00430 2e-42 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDCMJDCM_00431 6.7e-57 3.1.3.18 J HAD-hyrolase-like
PDCMJDCM_00432 1.7e-54 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDCMJDCM_00433 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDCMJDCM_00434 3.1e-77 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDCMJDCM_00435 5.8e-118 prmA J Ribosomal protein L11 methyltransferase
PDCMJDCM_00436 7.6e-43 XK27_03960 S Protein of unknown function (DUF3013)
PDCMJDCM_00437 1.5e-143 iunH2 3.2.2.1 F nucleoside hydrolase
PDCMJDCM_00438 6.4e-12
PDCMJDCM_00439 2.2e-68 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDCMJDCM_00440 1.8e-97 udk 2.7.1.48 F Cytidine monophosphokinase
PDCMJDCM_00441 9.3e-129 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDCMJDCM_00442 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDCMJDCM_00443 7.4e-173 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDCMJDCM_00444 9.1e-43 yodB K Transcriptional regulator, HxlR family
PDCMJDCM_00445 2.1e-67 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDCMJDCM_00446 5.9e-87 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDCMJDCM_00449 1.7e-15
PDCMJDCM_00450 2.1e-71 L PFAM transposase IS200-family protein
PDCMJDCM_00451 3.6e-69 L HTH-like domain
PDCMJDCM_00452 4.5e-30 L Helix-turn-helix domain
PDCMJDCM_00453 4.2e-208 G glycerol-3-phosphate transporter
PDCMJDCM_00454 1.7e-46 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDCMJDCM_00455 5.9e-88 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
PDCMJDCM_00456 3.3e-25 K MarR family transcriptional regulator
PDCMJDCM_00457 4.4e-40 1.6.5.2 GM NAD(P)H-binding
PDCMJDCM_00458 1.5e-72 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDCMJDCM_00459 3.7e-145 htrA 3.4.21.107 O serine protease
PDCMJDCM_00460 1.3e-116 vicX 3.1.26.11 S domain protein
PDCMJDCM_00461 1.8e-30 yyaQ S YjbR
PDCMJDCM_00462 5.6e-80 yycI S YycH protein
PDCMJDCM_00463 4.6e-103 yycH S YycH protein
PDCMJDCM_00464 1.1e-272 vicK 2.7.13.3 T Histidine kinase
PDCMJDCM_00465 9e-114 K response regulator
PDCMJDCM_00466 6.3e-85 yxeH S hydrolase
PDCMJDCM_00468 3.3e-96 S Domain of unknown function DUF87
PDCMJDCM_00470 1.1e-229 V ABC transporter transmembrane region
PDCMJDCM_00471 3.1e-216 XK27_09600 V ABC transporter, ATP-binding protein
PDCMJDCM_00472 1.2e-31 K Transcriptional regulator, MarR family
PDCMJDCM_00473 2.9e-172 S Putative peptidoglycan binding domain
PDCMJDCM_00475 4e-23 relB L RelB antitoxin
PDCMJDCM_00476 6.4e-62 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PDCMJDCM_00477 1.1e-139 gldA 1.1.1.6 C Iron-containing alcohol dehydrogenase
PDCMJDCM_00478 4.4e-179 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PDCMJDCM_00479 1.5e-108 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDCMJDCM_00480 3.5e-223 pepF E Oligopeptidase F
PDCMJDCM_00481 1.6e-94 yicL EG EamA-like transporter family
PDCMJDCM_00482 2.4e-69 2.3.1.178 J Acetyltransferase (GNAT) domain
PDCMJDCM_00483 4.4e-170 yjjP S Putative threonine/serine exporter
PDCMJDCM_00484 2.8e-109 glcU U sugar transport
PDCMJDCM_00485 6.3e-13 K regulatory protein TetR
PDCMJDCM_00486 3.8e-152 mdtG EGP Major facilitator Superfamily
PDCMJDCM_00487 3.1e-106 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PDCMJDCM_00488 2.2e-224 yxbA 6.3.1.12 S ATP-grasp enzyme
PDCMJDCM_00489 1.5e-230 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDCMJDCM_00490 3.6e-17 yneR
PDCMJDCM_00491 7.4e-248 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDCMJDCM_00492 1.6e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDCMJDCM_00493 3.3e-12 yiiE S Protein of unknown function (DUF1211)
PDCMJDCM_00494 3.7e-37 yiiE S Protein of unknown function (DUF1211)
PDCMJDCM_00495 0.0 asnB 6.3.5.4 E Asparagine synthase
PDCMJDCM_00496 7.4e-64 D peptidase
PDCMJDCM_00497 7.3e-117 S Glycosyl transferase family 2
PDCMJDCM_00498 2.5e-110 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PDCMJDCM_00499 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDCMJDCM_00500 3.3e-63 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDCMJDCM_00501 4.8e-45 rpsF J Binds together with S18 to 16S ribosomal RNA
PDCMJDCM_00502 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDCMJDCM_00503 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDCMJDCM_00504 9.3e-153 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDCMJDCM_00505 9e-20 yaaA S S4 domain protein YaaA
PDCMJDCM_00506 3.9e-159 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDCMJDCM_00507 2.1e-204 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDCMJDCM_00508 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PDCMJDCM_00509 2.2e-49 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDCMJDCM_00510 3.1e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDCMJDCM_00511 1.1e-199 nupG F Nucleoside
PDCMJDCM_00512 2e-122 MA20_14895 S Conserved hypothetical protein 698
PDCMJDCM_00513 2.9e-53 K LysR substrate binding domain
PDCMJDCM_00514 9.6e-09
PDCMJDCM_00515 2.3e-65 yxkH G Polysaccharide deacetylase
PDCMJDCM_00516 2.6e-29 yqkB S Belongs to the HesB IscA family
PDCMJDCM_00517 1e-42
PDCMJDCM_00518 3.2e-214 ugd 1.1.1.22 M UDP binding domain
PDCMJDCM_00519 2.6e-77 epsB M biosynthesis protein
PDCMJDCM_00520 9.3e-82 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PDCMJDCM_00521 1.6e-111 ywqE 3.1.3.48 GM PHP domain protein
PDCMJDCM_00522 1.8e-125 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDCMJDCM_00523 2e-91 rfbP M Bacterial sugar transferase
PDCMJDCM_00524 1.8e-95 M Core-2/I-Branching enzyme
PDCMJDCM_00525 1.6e-194 glf 5.4.99.9 M UDP-galactopyranose mutase
PDCMJDCM_00526 3.7e-65 S Glycosyltransferase like family 2
PDCMJDCM_00527 2e-160 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PDCMJDCM_00528 5.8e-57 cps3F
PDCMJDCM_00529 9.8e-74 M transferase activity, transferring glycosyl groups
PDCMJDCM_00530 2e-69 rny D Peptidase family M23
PDCMJDCM_00532 1.8e-135 tetA EGP Major facilitator Superfamily
PDCMJDCM_00533 1.8e-32 yvdC S MazG nucleotide pyrophosphohydrolase domain
PDCMJDCM_00534 2.5e-183 yjeM E Amino Acid
PDCMJDCM_00535 1.9e-190 glnPH2 P ABC transporter permease
PDCMJDCM_00536 2.3e-112 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDCMJDCM_00537 6.3e-44 E GDSL-like Lipase/Acylhydrolase
PDCMJDCM_00538 1e-133 coaA 2.7.1.33 F Pantothenic acid kinase
PDCMJDCM_00539 7.6e-275 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDCMJDCM_00540 7.3e-82
PDCMJDCM_00541 8.5e-34 S Predicted membrane protein (DUF2142)
PDCMJDCM_00542 5e-115 rfbJ M Glycosyl transferase family 2
PDCMJDCM_00543 2.1e-30 gtcA S Teichoic acid glycosylation protein
PDCMJDCM_00544 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDCMJDCM_00545 1.2e-160 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDCMJDCM_00546 4.7e-96 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDCMJDCM_00547 5.4e-67 XK27_09620 S NADPH-dependent FMN reductase
PDCMJDCM_00548 2.7e-156 XK27_09615 S reductase
PDCMJDCM_00549 1.5e-39 2.7.7.65 T phosphorelay sensor kinase activity
PDCMJDCM_00550 3.3e-146 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PDCMJDCM_00551 1.5e-55 S Psort location CytoplasmicMembrane, score
PDCMJDCM_00552 3.6e-14
PDCMJDCM_00553 2.9e-44 S Bacterial membrane protein, YfhO
PDCMJDCM_00554 8.5e-22 S Bacterial membrane protein, YfhO
PDCMJDCM_00555 8.8e-102 S Bacterial membrane protein, YfhO
PDCMJDCM_00556 3.2e-129 S Bacterial membrane protein YfhO
PDCMJDCM_00557 2.5e-146 XK27_08315 M Sulfatase
PDCMJDCM_00558 8.8e-50 yugI 5.3.1.9 J general stress protein
PDCMJDCM_00559 2.7e-95 trxB2 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PDCMJDCM_00560 3e-92 dedA S SNARE associated Golgi protein
PDCMJDCM_00561 7.8e-32 S Protein of unknown function (DUF1461)
PDCMJDCM_00562 2.9e-113 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDCMJDCM_00563 1.9e-53 yutD S Protein of unknown function (DUF1027)
PDCMJDCM_00564 3e-57 S Calcineurin-like phosphoesterase
PDCMJDCM_00565 9.3e-184 cycA E Amino acid permease
PDCMJDCM_00566 7.6e-98 ytxK 2.1.1.72 L N-6 DNA Methylase
PDCMJDCM_00568 5.5e-11 S Putative Competence protein ComGF
PDCMJDCM_00570 1.5e-13
PDCMJDCM_00571 1.2e-27 comGC U competence protein ComGC
PDCMJDCM_00572 5.7e-98 comGB NU type II secretion system
PDCMJDCM_00573 4.7e-121 comGA NU Type II IV secretion system protein
PDCMJDCM_00574 2.1e-102 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDCMJDCM_00575 1.5e-119 yebC K Transcriptional regulatory protein
PDCMJDCM_00576 3.7e-42 S VanZ like family
PDCMJDCM_00577 1.3e-158 ccpA K catabolite control protein A
PDCMJDCM_00578 1e-172 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDCMJDCM_00579 1.5e-13
PDCMJDCM_00582 1.7e-74 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDCMJDCM_00583 7.1e-35 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDCMJDCM_00584 8.9e-65 hly S protein, hemolysin III
PDCMJDCM_00585 7.3e-41 M1-874 K Domain of unknown function (DUF1836)
PDCMJDCM_00586 9.4e-84 S membrane
PDCMJDCM_00587 1.1e-79 S VIT family
PDCMJDCM_00588 1.8e-148 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PDCMJDCM_00589 7.9e-56 P Plays a role in the regulation of phosphate uptake
PDCMJDCM_00590 1.8e-115 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDCMJDCM_00591 2.7e-114 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDCMJDCM_00592 3e-122 pstA P Phosphate transport system permease protein PstA
PDCMJDCM_00593 4.1e-119 pstC P probably responsible for the translocation of the substrate across the membrane
PDCMJDCM_00594 3.2e-97 pstS P Phosphate
PDCMJDCM_00595 1.3e-41 yjbH Q Thioredoxin
PDCMJDCM_00596 1.5e-232 pepF E oligoendopeptidase F
PDCMJDCM_00597 1.1e-68 coiA 3.6.4.12 S Competence protein
PDCMJDCM_00598 2.1e-47 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDCMJDCM_00599 1.4e-218 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PDCMJDCM_00605 5.1e-08
PDCMJDCM_00606 6.9e-206 yeeA V Type II restriction enzyme, methylase subunits
PDCMJDCM_00607 2.4e-257 yeeB L DEAD-like helicases superfamily
PDCMJDCM_00608 2.1e-91 pstS P T5orf172
PDCMJDCM_00609 6.9e-15
PDCMJDCM_00610 4.6e-24
PDCMJDCM_00613 1.3e-161 potE2 E amino acid
PDCMJDCM_00614 5.4e-87 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PDCMJDCM_00615 5.2e-47 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PDCMJDCM_00616 2.7e-116 queH 1.17.99.6, 3.1.26.4 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PDCMJDCM_00617 1.9e-57 racA K Domain of unknown function (DUF1836)
PDCMJDCM_00618 3.5e-80 yitS S EDD domain protein, DegV family
PDCMJDCM_00619 1.1e-45 yjaB_1 K Acetyltransferase (GNAT) domain
PDCMJDCM_00620 4.4e-07
PDCMJDCM_00621 2.4e-286 hsdR 3.1.21.3 L DEAD/DEAH box helicase
PDCMJDCM_00622 4e-225 hsdM 2.1.1.72 V type I restriction-modification system
PDCMJDCM_00623 8.6e-90 hsdS 3.1.21.3 L Type I restriction modification DNA specificity domain
PDCMJDCM_00624 4.1e-67
PDCMJDCM_00625 7.3e-118 O AAA domain (Cdc48 subfamily)
PDCMJDCM_00626 1e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDCMJDCM_00627 0.0 O Belongs to the peptidase S8 family
PDCMJDCM_00628 4.7e-26 S protein encoded in hypervariable junctions of pilus gene clusters
PDCMJDCM_00629 9e-102 qmcA O prohibitin homologues
PDCMJDCM_00631 4.1e-53 1.14.12.17 C Oxidoreductase NAD-binding domain
PDCMJDCM_00636 2.4e-19 M domain protein
PDCMJDCM_00638 4.5e-22 agrA KT Response regulator of the LytR AlgR family
PDCMJDCM_00639 4.1e-44 blpH 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDCMJDCM_00641 0.0 pepN 3.4.11.2 E aminopeptidase
PDCMJDCM_00642 1.9e-35
PDCMJDCM_00644 7.6e-125 D CobQ CobB MinD ParA nucleotide binding domain protein
PDCMJDCM_00645 2.7e-64 licT K transcriptional antiterminator
PDCMJDCM_00647 5.6e-181 G PTS system
PDCMJDCM_00648 1.7e-172 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDCMJDCM_00649 1.7e-38 S Replication initiator protein A (RepA) N-terminus
PDCMJDCM_00650 9.4e-109 L Initiator Replication protein
PDCMJDCM_00651 6.1e-08 yokH G regulation of fungal-type cell wall biogenesis
PDCMJDCM_00653 6.5e-12 L PLD-like domain
PDCMJDCM_00654 3.5e-23 L PLD-like domain
PDCMJDCM_00655 3.6e-73 L HTH-like domain
PDCMJDCM_00656 2.6e-30 L Helix-turn-helix domain
PDCMJDCM_00657 3.3e-102 L PLD-like domain
PDCMJDCM_00659 1.3e-10 tcdC
PDCMJDCM_00661 1.8e-231 tetP J elongation factor G
PDCMJDCM_00662 1.2e-31 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDCMJDCM_00664 2e-46 S CRISPR-associated protein (Cas_Csn2)
PDCMJDCM_00665 6.5e-37 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDCMJDCM_00666 3e-106 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDCMJDCM_00667 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PDCMJDCM_00668 1e-47 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PDCMJDCM_00669 2.4e-75 ung2 3.2.2.27 L Uracil-DNA glycosylase
PDCMJDCM_00670 1.6e-163 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDCMJDCM_00671 4.7e-130 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDCMJDCM_00672 2.1e-70 mltD CBM50 M NlpC P60 family protein
PDCMJDCM_00673 3.2e-52 manO S Domain of unknown function (DUF956)
PDCMJDCM_00674 2.1e-147 manN G system, mannose fructose sorbose family IID component
PDCMJDCM_00675 6.4e-116 manY G PTS system sorbose-specific iic component
PDCMJDCM_00676 9e-152 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PDCMJDCM_00677 7e-80 rbsB G sugar-binding domain protein
PDCMJDCM_00678 1.6e-100 baeS T Histidine kinase
PDCMJDCM_00679 3e-79 baeR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PDCMJDCM_00680 6.9e-120 G Bacterial extracellular solute-binding protein
PDCMJDCM_00681 9.1e-71 S Protein of unknown function (DUF554)
PDCMJDCM_00682 1.8e-39 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDCMJDCM_00683 4.2e-32 merR K MerR HTH family regulatory protein
PDCMJDCM_00684 2.1e-197 lmrB EGP Major facilitator Superfamily
PDCMJDCM_00685 1.2e-33 S Domain of unknown function (DUF4811)
PDCMJDCM_00686 1.9e-41 S CAAX protease self-immunity
PDCMJDCM_00687 6.4e-32 S Calcineurin-like phosphoesterase
PDCMJDCM_00694 2.7e-21 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PDCMJDCM_00695 1.8e-98 M hydrolase, family 25
PDCMJDCM_00696 2.2e-201 argH 4.3.2.1 E argininosuccinate lyase
PDCMJDCM_00697 1.9e-196 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDCMJDCM_00698 6.2e-152 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PDCMJDCM_00699 2.2e-126 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDCMJDCM_00700 2.5e-104 pfoS S Phosphotransferase system, EIIC
PDCMJDCM_00701 3.9e-185 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDCMJDCM_00702 6.6e-53 adhR K helix_turn_helix, mercury resistance
PDCMJDCM_00703 5.2e-137 purR 2.4.2.7 F pur operon repressor
PDCMJDCM_00704 2.1e-46 EGP Transmembrane secretion effector
PDCMJDCM_00705 1.1e-192 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDCMJDCM_00706 2.3e-168 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDCMJDCM_00707 7.7e-19 rimL 1.1.1.25 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDCMJDCM_00708 7.6e-112 dkg S reductase
PDCMJDCM_00709 1.1e-23
PDCMJDCM_00710 1e-78 2.4.2.3 F Phosphorylase superfamily
PDCMJDCM_00711 2e-289 ybiT S ABC transporter, ATP-binding protein
PDCMJDCM_00712 5.4e-37 bCE_4747 S Beta-lactamase superfamily domain
PDCMJDCM_00713 1e-60 yceE S haloacid dehalogenase-like hydrolase
PDCMJDCM_00714 5.8e-74 glcR K DeoR C terminal sensor domain
PDCMJDCM_00715 2.5e-95 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDCMJDCM_00716 5.7e-184 lmrB EGP Major facilitator Superfamily
PDCMJDCM_00717 1.2e-54 bioY S BioY family
PDCMJDCM_00718 2e-93 S Predicted membrane protein (DUF2207)
PDCMJDCM_00719 1.4e-19
PDCMJDCM_00720 1.4e-102 pfoS S Phosphotransferase system, EIIC
PDCMJDCM_00721 5.3e-120 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDCMJDCM_00722 1.1e-43 K helix_turn_helix isocitrate lyase regulation
PDCMJDCM_00723 5.7e-54 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PDCMJDCM_00724 2.2e-58 ktrA P TrkA-N domain
PDCMJDCM_00725 2.1e-114 ntpJ P Potassium uptake protein
PDCMJDCM_00726 2e-183 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PDCMJDCM_00727 6.1e-282 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
PDCMJDCM_00728 1.8e-217 scrB 3.2.1.26 GH32 G invertase
PDCMJDCM_00729 1.7e-147 scrR K helix_turn _helix lactose operon repressor
PDCMJDCM_00730 4.4e-262 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PDCMJDCM_00731 1.1e-178 proV E ABC transporter, ATP-binding protein
PDCMJDCM_00732 2.6e-247 gshR 1.8.1.7 C Glutathione reductase
PDCMJDCM_00733 1.6e-100 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PDCMJDCM_00734 6.7e-105
PDCMJDCM_00735 2.5e-38 S RelB antitoxin
PDCMJDCM_00736 2.9e-289 norB EGP Major Facilitator
PDCMJDCM_00737 3e-99 K Bacterial regulatory proteins, tetR family
PDCMJDCM_00738 3.2e-103 pncA Q Isochorismatase family
PDCMJDCM_00739 1.8e-270 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDCMJDCM_00740 1.1e-130 3.6.1.13, 3.6.1.55 F NUDIX domain
PDCMJDCM_00741 8.5e-64 V HNH endonuclease
PDCMJDCM_00743 2.2e-122 yvgN C Aldo keto reductase
PDCMJDCM_00744 2.2e-70 K DeoR C terminal sensor domain
PDCMJDCM_00745 6.8e-46 pts36A 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDCMJDCM_00746 6.9e-42 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PDCMJDCM_00747 1.2e-216 pts36C G PTS system sugar-specific permease component
PDCMJDCM_00749 2.3e-104 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
PDCMJDCM_00751 5.4e-58 S COG NOG19168 non supervised orthologous group
PDCMJDCM_00752 1.4e-189 XK27_11280 S Psort location CytoplasmicMembrane, score
PDCMJDCM_00753 7.1e-15 L Plasmid pRiA4b ORF-3-like protein
PDCMJDCM_00754 9e-106 L Belongs to the 'phage' integrase family
PDCMJDCM_00755 5.6e-18 3.1.21.3 V Type I restriction modification DNA specificity domain
PDCMJDCM_00756 6.6e-60 hsdM 2.1.1.72 V type I restriction-modification system
PDCMJDCM_00758 2.3e-125 L T/G mismatch-specific endonuclease activity
PDCMJDCM_00759 4.5e-20 L T/G mismatch-specific endonuclease activity
PDCMJDCM_00770 2.1e-07
PDCMJDCM_00780 7.4e-177 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDCMJDCM_00781 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDCMJDCM_00782 9.7e-194 cycA E Amino acid permease
PDCMJDCM_00783 8.3e-187 ytgP S Polysaccharide biosynthesis protein
PDCMJDCM_00784 1.1e-61 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDCMJDCM_00785 1.2e-80 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDCMJDCM_00786 5.1e-193 pepV 3.5.1.18 E dipeptidase PepV
PDCMJDCM_00787 3.3e-182 S Protein of unknown function DUF262
PDCMJDCM_00789 3e-36
PDCMJDCM_00790 1.3e-65 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDCMJDCM_00791 4.2e-61 marR K Transcriptional regulator, MarR family
PDCMJDCM_00792 6.4e-102 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDCMJDCM_00793 2.2e-27 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDCMJDCM_00794 6.5e-104 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PDCMJDCM_00795 1.4e-98 IQ reductase
PDCMJDCM_00796 1.8e-194 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDCMJDCM_00797 7.9e-47 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDCMJDCM_00798 1.5e-63 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDCMJDCM_00799 9.3e-216 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PDCMJDCM_00800 4.7e-125 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDCMJDCM_00801 2.3e-102 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PDCMJDCM_00802 5.5e-109 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PDCMJDCM_00803 1.5e-230 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDCMJDCM_00804 3.1e-240 pgi 5.3.1.9 G Belongs to the GPI family
PDCMJDCM_00805 2.7e-302 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDCMJDCM_00806 5.7e-119 gla U Major intrinsic protein
PDCMJDCM_00807 5.8e-45 ykuL S CBS domain
PDCMJDCM_00808 1.5e-60 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDCMJDCM_00809 4.1e-177 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDCMJDCM_00810 2.1e-88 ykuT M mechanosensitive ion channel
PDCMJDCM_00812 1e-285 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDCMJDCM_00813 2e-21 yheA S Belongs to the UPF0342 family
PDCMJDCM_00814 5e-128 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDCMJDCM_00815 6.6e-114 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDCMJDCM_00817 5.4e-53 hit FG histidine triad
PDCMJDCM_00818 2.8e-94 ecsA V ABC transporter, ATP-binding protein
PDCMJDCM_00819 1.3e-72 ecsB U ABC transporter
PDCMJDCM_00820 1.6e-98 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PDCMJDCM_00821 7.9e-101 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDCMJDCM_00822 4e-45 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PDCMJDCM_00823 6.8e-76 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDCMJDCM_00824 9e-240 sftA D Belongs to the FtsK SpoIIIE SftA family
PDCMJDCM_00825 7.6e-223 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PDCMJDCM_00826 2.5e-61 phaJ I N-terminal half of MaoC dehydratase
PDCMJDCM_00827 8.8e-69 ybhL S Belongs to the BI1 family
PDCMJDCM_00828 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDCMJDCM_00829 3.3e-107 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDCMJDCM_00830 2.1e-50 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDCMJDCM_00831 6.1e-66 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDCMJDCM_00832 1.6e-79 dnaB L replication initiation and membrane attachment
PDCMJDCM_00833 2.2e-107 dnaI L Primosomal protein DnaI
PDCMJDCM_00834 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDCMJDCM_00835 1.3e-79 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDCMJDCM_00836 1.4e-24 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PDCMJDCM_00837 7.7e-53 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDCMJDCM_00838 2.5e-71 yqeG S HAD phosphatase, family IIIA
PDCMJDCM_00839 7.9e-181 yqeH S Ribosome biogenesis GTPase YqeH
PDCMJDCM_00840 1e-29 yhbY J RNA-binding protein
PDCMJDCM_00841 2.7e-77 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDCMJDCM_00842 1e-70 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PDCMJDCM_00843 1.5e-48 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDCMJDCM_00844 4.2e-82 H Nodulation protein S (NodS)
PDCMJDCM_00845 1.3e-122 ylbM S Belongs to the UPF0348 family
PDCMJDCM_00846 2e-57 yceD S Uncharacterized ACR, COG1399
PDCMJDCM_00847 1.9e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PDCMJDCM_00848 1.2e-88 plsC 2.3.1.51 I Acyltransferase
PDCMJDCM_00849 1.1e-93 yabB 2.1.1.223 L Methyltransferase small domain
PDCMJDCM_00850 1.5e-27 yazA L GIY-YIG catalytic domain protein
PDCMJDCM_00851 1.9e-128 rpsB J Belongs to the universal ribosomal protein uS2 family
PDCMJDCM_00852 2.7e-128 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDCMJDCM_00853 6.9e-37
PDCMJDCM_00854 3.4e-92 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDCMJDCM_00855 4.1e-57 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDCMJDCM_00856 3.8e-159 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDCMJDCM_00857 1.2e-225 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDCMJDCM_00858 8.6e-107 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDCMJDCM_00860 3.1e-111 K response regulator
PDCMJDCM_00861 5e-167 arlS 2.7.13.3 T Histidine kinase
PDCMJDCM_00862 1.6e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDCMJDCM_00863 9.7e-24 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PDCMJDCM_00864 4.3e-137 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PDCMJDCM_00865 7.3e-105
PDCMJDCM_00866 7.2e-117
PDCMJDCM_00867 1.3e-41 dut S dUTPase
PDCMJDCM_00868 2.1e-94 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDCMJDCM_00869 3.7e-46 yqhY S Asp23 family, cell envelope-related function
PDCMJDCM_00870 1.9e-36 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDCMJDCM_00871 1.7e-103 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDCMJDCM_00872 1.2e-146 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDCMJDCM_00873 1.2e-16 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDCMJDCM_00874 4.7e-83 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDCMJDCM_00875 1.2e-120 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDCMJDCM_00876 6.6e-49 argR K Regulates arginine biosynthesis genes
PDCMJDCM_00877 4.2e-178 recN L May be involved in recombinational repair of damaged DNA
PDCMJDCM_00878 7.2e-83 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDCMJDCM_00879 2.2e-30 ynzC S UPF0291 protein
PDCMJDCM_00880 5.9e-27 yneF S UPF0154 protein
PDCMJDCM_00881 1.8e-91 engB D Necessary for normal cell division and for the maintenance of normal septation
PDCMJDCM_00882 5.4e-44 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PDCMJDCM_00883 1.2e-74 yciQ P membrane protein (DUF2207)
PDCMJDCM_00884 3e-19 D nuclear chromosome segregation
PDCMJDCM_00885 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDCMJDCM_00886 1.6e-38 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDCMJDCM_00887 7.4e-70 gluP 3.4.21.105 S Peptidase, S54 family
PDCMJDCM_00888 1.5e-25 yqgQ S Bacterial protein of unknown function (DUF910)
PDCMJDCM_00889 4.7e-158 glk 2.7.1.2 G Glucokinase
PDCMJDCM_00890 2.7e-46 yqhL P Rhodanese-like protein
PDCMJDCM_00891 9.7e-17 WQ51_02665 S Protein of unknown function (DUF3042)
PDCMJDCM_00892 1.9e-111 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDCMJDCM_00893 1.8e-205 ynbB 4.4.1.1 P aluminum resistance
PDCMJDCM_00894 1.3e-45 glnR K Transcriptional regulator
PDCMJDCM_00895 2e-247 glnA 6.3.1.2 E glutamine synthetase
PDCMJDCM_00897 5.8e-37 ogt 2.1.1.63 H Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PDCMJDCM_00898 2.7e-48 S Domain of unknown function (DUF956)
PDCMJDCM_00899 6.3e-115 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDCMJDCM_00900 7.2e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDCMJDCM_00901 3.8e-105 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDCMJDCM_00902 5.1e-102 cdsA 2.7.7.41 S Belongs to the CDS family
PDCMJDCM_00903 4.1e-157 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PDCMJDCM_00904 5.9e-260 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDCMJDCM_00905 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDCMJDCM_00906 2.7e-66 rimP J Required for maturation of 30S ribosomal subunits
PDCMJDCM_00907 4.8e-170 nusA K Participates in both transcription termination and antitermination
PDCMJDCM_00908 1.4e-39 ylxR K Protein of unknown function (DUF448)
PDCMJDCM_00909 6.9e-26 ylxQ J ribosomal protein
PDCMJDCM_00910 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDCMJDCM_00911 1.3e-55 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDCMJDCM_00912 1.4e-119 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDCMJDCM_00913 2.5e-95 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDCMJDCM_00914 1.4e-131 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDCMJDCM_00915 4.2e-56 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDCMJDCM_00916 1.5e-274 dnaK O Heat shock 70 kDa protein
PDCMJDCM_00917 1.2e-160 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDCMJDCM_00918 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDCMJDCM_00920 9.2e-206 glnP P ABC transporter
PDCMJDCM_00921 2.6e-119 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDCMJDCM_00922 1.5e-31
PDCMJDCM_00923 2e-111 ampC V Beta-lactamase
PDCMJDCM_00924 3.5e-110 cobQ S glutamine amidotransferase
PDCMJDCM_00925 4.7e-220 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PDCMJDCM_00926 6.8e-86 tdk 2.7.1.21 F thymidine kinase
PDCMJDCM_00927 2.3e-177 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDCMJDCM_00928 1.4e-89 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDCMJDCM_00929 7.7e-135 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDCMJDCM_00930 5e-100 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDCMJDCM_00931 4.5e-97 atpB C it plays a direct role in the translocation of protons across the membrane
PDCMJDCM_00932 1.8e-15 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDCMJDCM_00933 2.4e-39 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDCMJDCM_00934 2.7e-57 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDCMJDCM_00935 6.3e-266 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDCMJDCM_00936 1.3e-141 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDCMJDCM_00937 1.7e-236 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDCMJDCM_00938 3.9e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDCMJDCM_00939 4.1e-15 ywzB S Protein of unknown function (DUF1146)
PDCMJDCM_00940 9.3e-197 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDCMJDCM_00941 3.4e-167 mbl D Cell shape determining protein MreB Mrl
PDCMJDCM_00942 1.2e-26 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PDCMJDCM_00943 1.8e-12 S Protein of unknown function (DUF2969)
PDCMJDCM_00944 6.1e-187 rodA D Belongs to the SEDS family
PDCMJDCM_00945 3.5e-26 arsC 1.20.4.1 P Belongs to the ArsC family
PDCMJDCM_00946 5.6e-94 2.7.1.89 M Phosphotransferase enzyme family
PDCMJDCM_00947 1.1e-102 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PDCMJDCM_00948 2.5e-21 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDCMJDCM_00949 4.4e-121 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDCMJDCM_00950 2.4e-288 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDCMJDCM_00951 5.8e-140 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDCMJDCM_00952 2.2e-153 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDCMJDCM_00953 3.3e-90 stp 3.1.3.16 T phosphatase
PDCMJDCM_00954 3.4e-191 KLT serine threonine protein kinase
PDCMJDCM_00955 1.8e-111 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDCMJDCM_00956 3.8e-58 thiN 2.7.6.2 H thiamine pyrophosphokinase
PDCMJDCM_00957 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PDCMJDCM_00958 4.5e-53 asp S Asp23 family, cell envelope-related function
PDCMJDCM_00959 2.8e-238 yloV S DAK2 domain fusion protein YloV
PDCMJDCM_00960 3.3e-246 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDCMJDCM_00961 1.6e-140 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDCMJDCM_00962 2.7e-25 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDCMJDCM_00963 1.1e-100 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDCMJDCM_00964 4.7e-211 smc D Required for chromosome condensation and partitioning
PDCMJDCM_00965 9.1e-149 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDCMJDCM_00966 7e-40 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDCMJDCM_00967 5e-204 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDCMJDCM_00968 3.6e-42 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDCMJDCM_00969 1.1e-26 ylqC S Belongs to the UPF0109 family
PDCMJDCM_00970 1.9e-57 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDCMJDCM_00971 7.3e-114 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDCMJDCM_00972 5.7e-61 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
PDCMJDCM_00973 7.7e-197 yfnA E amino acid
PDCMJDCM_00974 3e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDCMJDCM_00975 1.8e-32 rpsT J Binds directly to 16S ribosomal RNA
PDCMJDCM_00976 5.6e-40 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDCMJDCM_00977 5.3e-116 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDCMJDCM_00978 3.8e-267 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDCMJDCM_00979 6.1e-19 S Tetratricopeptide repeat
PDCMJDCM_00980 1.4e-215 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDCMJDCM_00981 6e-196 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDCMJDCM_00982 1e-197 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDCMJDCM_00983 2.3e-249 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDCMJDCM_00984 1.5e-300 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDCMJDCM_00985 5e-23 ykzG S Belongs to the UPF0356 family
PDCMJDCM_00986 1.6e-24
PDCMJDCM_00987 2.2e-86 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDCMJDCM_00988 3.7e-32 1.1.1.27 C L-malate dehydrogenase activity
PDCMJDCM_00989 1.7e-23 yktA S Belongs to the UPF0223 family
PDCMJDCM_00990 2.2e-76 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PDCMJDCM_00991 0.0 typA T GTP-binding protein TypA
PDCMJDCM_00992 6e-148 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PDCMJDCM_00993 7e-115 manY G PTS system
PDCMJDCM_00994 3.3e-148 manN G system, mannose fructose sorbose family IID component
PDCMJDCM_00995 1.6e-102 ftsW D Belongs to the SEDS family
PDCMJDCM_00996 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PDCMJDCM_00997 1.1e-17 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PDCMJDCM_00998 7.2e-74 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PDCMJDCM_00999 2.4e-49 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDCMJDCM_01000 2.4e-131 ylbL T Belongs to the peptidase S16 family
PDCMJDCM_01001 2.2e-96 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PDCMJDCM_01002 2.2e-30 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDCMJDCM_01003 6.8e-103 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDCMJDCM_01004 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDCMJDCM_01005 2.1e-226 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDCMJDCM_01006 2.4e-139 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PDCMJDCM_01007 5.2e-75 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDCMJDCM_01008 8.5e-234 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PDCMJDCM_01009 1e-152 purD 6.3.4.13 F Belongs to the GARS family
PDCMJDCM_01010 1.5e-93 S Acyltransferase family
PDCMJDCM_01011 2.2e-194 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDCMJDCM_01012 3.9e-122 K LysR substrate binding domain
PDCMJDCM_01014 2.2e-20
PDCMJDCM_01015 6.2e-59 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDCMJDCM_01016 5.8e-268 argS 6.1.1.19 J Arginyl-tRNA synthetase
PDCMJDCM_01017 1.4e-50 comEA L Competence protein ComEA
PDCMJDCM_01018 2e-69 comEB 3.5.4.12 F ComE operon protein 2
PDCMJDCM_01019 1.4e-155 comEC S Competence protein ComEC
PDCMJDCM_01020 9.3e-104 holA 2.7.7.7 L DNA polymerase III delta subunit
PDCMJDCM_01021 1.3e-113 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDCMJDCM_01022 3e-137 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PDCMJDCM_01023 2.8e-118 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PDCMJDCM_01024 8.1e-94 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PDCMJDCM_01025 1.5e-228 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PDCMJDCM_01026 1.4e-36 ypmB S Protein conserved in bacteria
PDCMJDCM_01027 4e-143 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PDCMJDCM_01028 1.7e-235 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PDCMJDCM_01029 5.1e-56 dnaD L DnaD domain protein
PDCMJDCM_01030 4.4e-83 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDCMJDCM_01031 1.2e-78 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDCMJDCM_01032 9.6e-126 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDCMJDCM_01033 1.9e-93 M transferase activity, transferring glycosyl groups
PDCMJDCM_01034 1.8e-83 M Glycosyltransferase sugar-binding region containing DXD motif
PDCMJDCM_01035 1.3e-99 epsJ1 M Glycosyltransferase like family 2
PDCMJDCM_01038 1.1e-115 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PDCMJDCM_01039 4.7e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PDCMJDCM_01040 1.8e-56 yqeY S YqeY-like protein
PDCMJDCM_01042 3.9e-68 xerD L Phage integrase, N-terminal SAM-like domain
PDCMJDCM_01043 1e-106 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDCMJDCM_01044 1.1e-107 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDCMJDCM_01045 6.6e-133 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDCMJDCM_01046 2.9e-276 yfmR S ABC transporter, ATP-binding protein
PDCMJDCM_01047 4.4e-156 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDCMJDCM_01048 3.2e-57 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDCMJDCM_01049 8.6e-135 yvgN C Aldo keto reductase
PDCMJDCM_01051 2.1e-15 K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PDCMJDCM_01052 1.3e-102 S Aldo keto reductase
PDCMJDCM_01054 7.2e-79 ypmR E GDSL-like Lipase/Acylhydrolase
PDCMJDCM_01055 5.7e-53 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PDCMJDCM_01056 3.6e-24 yozE S Belongs to the UPF0346 family
PDCMJDCM_01057 4.7e-133 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDCMJDCM_01058 4.9e-97 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDCMJDCM_01059 6.2e-85 dprA LU DNA protecting protein DprA
PDCMJDCM_01060 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDCMJDCM_01061 9.5e-210 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PDCMJDCM_01062 5.8e-205 G PTS system Galactitol-specific IIC component
PDCMJDCM_01063 2.3e-81 K Bacterial regulatory proteins, tetR family
PDCMJDCM_01064 3.3e-129 yjjC V ATPases associated with a variety of cellular activities
PDCMJDCM_01065 1.1e-202 M Exporter of polyketide antibiotics
PDCMJDCM_01066 4e-100 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDCMJDCM_01067 2.3e-34 S Repeat protein
PDCMJDCM_01068 5.8e-277 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDCMJDCM_01070 2.3e-119 L Belongs to the 'phage' integrase family
PDCMJDCM_01071 4.7e-14
PDCMJDCM_01073 2.1e-10
PDCMJDCM_01076 2.4e-12 M Host cell surface-exposed lipoprotein
PDCMJDCM_01078 1.5e-13
PDCMJDCM_01079 8.6e-19 L nuclease
PDCMJDCM_01080 8.9e-16 E IrrE N-terminal-like domain
PDCMJDCM_01081 5.7e-25 K Helix-turn-helix XRE-family like proteins
PDCMJDCM_01083 3.9e-14 K Helix-turn-helix XRE-family like proteins
PDCMJDCM_01084 2.1e-13 K Phage regulatory protein
PDCMJDCM_01085 1.9e-12 K Phage regulatory protein
PDCMJDCM_01087 4.8e-19 S Domain of unknown function (DUF771)
PDCMJDCM_01092 1.1e-120 L snf2 family
PDCMJDCM_01094 1.8e-18
PDCMJDCM_01095 2e-25 L VRR_NUC
PDCMJDCM_01096 1.4e-125 L AAA domain
PDCMJDCM_01097 2.4e-35 S Protein of unknown function (DUF669)
PDCMJDCM_01098 8.9e-176 polB 2.7.7.7 L DNA polymerase elongation subunit (Family B)
PDCMJDCM_01099 5.5e-158 L Phage plasmid primase, P4 family
PDCMJDCM_01103 4.1e-08
PDCMJDCM_01104 5e-28 S HNH endonuclease
PDCMJDCM_01105 1.7e-59 L Belongs to the 'phage' integrase family
PDCMJDCM_01107 9.6e-70 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
PDCMJDCM_01116 9.3e-18
PDCMJDCM_01118 4.9e-22 L HNH nucleases
PDCMJDCM_01119 4.2e-32 L Phage terminase, small subunit
PDCMJDCM_01120 8.5e-211 S Terminase
PDCMJDCM_01121 1.6e-105 S Phage portal protein, HK97 family
PDCMJDCM_01122 7.6e-71 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PDCMJDCM_01123 3.3e-94 S Phage capsid family
PDCMJDCM_01124 3.1e-13 L Phage gp6-like head-tail connector protein
PDCMJDCM_01126 2e-12 S Bacteriophage HK97-gp10, putative tail-component
PDCMJDCM_01128 1.2e-24 S Phage tail tube protein
PDCMJDCM_01130 1.1e-105 M Phage tail tape measure protein TP901
PDCMJDCM_01131 4e-89 S Phage tail protein
PDCMJDCM_01132 9.1e-275 rny D peptidase
PDCMJDCM_01133 1.2e-149 cbiO2 P ABC transporter
PDCMJDCM_01134 1.3e-156 P ABC transporter
PDCMJDCM_01135 1.3e-132 cbiQ P Cobalt transport protein
PDCMJDCM_01136 8.5e-89 2.7.7.65 T phosphorelay sensor kinase activity
PDCMJDCM_01137 0.0 M Cna protein B-type domain
PDCMJDCM_01138 1.1e-258 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PDCMJDCM_01139 4.6e-79
PDCMJDCM_01140 1.1e-47 L Transposase
PDCMJDCM_01141 2.5e-158 L Transposase
PDCMJDCM_01142 1.4e-10 S Protein of unknown function (DUF3021)
PDCMJDCM_01143 7e-27 K LytTr DNA-binding domain
PDCMJDCM_01144 4.1e-60 cylB V ABC-2 type transporter
PDCMJDCM_01145 2.4e-76 cylA V abc transporter atp-binding protein
PDCMJDCM_01146 5.2e-59 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDCMJDCM_01147 7.2e-149 mepA V MATE efflux family protein
PDCMJDCM_01148 4.3e-150 lsa S ABC transporter
PDCMJDCM_01149 5.2e-83 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDCMJDCM_01150 8e-110 puuD S peptidase C26
PDCMJDCM_01151 2.2e-201 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PDCMJDCM_01152 1.3e-24
PDCMJDCM_01153 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
PDCMJDCM_01154 6.6e-60 uspA T Universal stress protein family
PDCMJDCM_01156 2.5e-211 glnP P ABC transporter
PDCMJDCM_01157 1.9e-168 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PDCMJDCM_01158 5e-57 S peptidoglycan catabolic process
PDCMJDCM_01159 5.6e-89 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDCMJDCM_01160 5.2e-168 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PDCMJDCM_01161 2.4e-128 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDCMJDCM_01162 4.1e-177 thrC 4.2.3.1 E Threonine synthase
PDCMJDCM_01163 3.5e-82 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDCMJDCM_01164 0.0 L MobA MobL family protein
PDCMJDCM_01165 2.8e-23
PDCMJDCM_01166 4e-41
PDCMJDCM_01167 4.9e-72 S protein conserved in bacteria
PDCMJDCM_01168 4.1e-29 S protein conserved in bacteria
PDCMJDCM_01169 8.3e-27
PDCMJDCM_01170 4.3e-43 relB L Addiction module antitoxin, RelB DinJ family
PDCMJDCM_01171 1.1e-138 S Fic/DOC family
PDCMJDCM_01172 4.9e-25
PDCMJDCM_01173 8.5e-35
PDCMJDCM_01174 4.9e-148 D CobQ CobB MinD ParA nucleotide binding domain protein
PDCMJDCM_01175 2.6e-55 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PDCMJDCM_01176 1.2e-48 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PDCMJDCM_01177 3.4e-19 tnp
PDCMJDCM_01178 5.8e-44 L hmm pf00665
PDCMJDCM_01179 1.1e-98 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PDCMJDCM_01180 1.2e-84 dps P Ferritin-like domain
PDCMJDCM_01184 2.8e-09 hol S Bacteriophage holin
PDCMJDCM_01185 6.5e-131 lys 3.5.1.104 M Glycosyl hydrolases family 25
PDCMJDCM_01186 4.7e-60 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDCMJDCM_01187 1.5e-46
PDCMJDCM_01188 3.3e-64
PDCMJDCM_01189 6.9e-60 yeeA V Type II restriction enzyme, methylase subunits
PDCMJDCM_01191 1.4e-23 S Calcineurin-like phosphoesterase
PDCMJDCM_01192 1.2e-57 tlpA2 L Transposase IS200 like
PDCMJDCM_01193 2.9e-41 S Acyltransferase family
PDCMJDCM_01194 6.3e-130 S Membrane protein involved in the export of O-antigen and teichoic acid
PDCMJDCM_01195 5.8e-26 S Acetyltransferase (Isoleucine patch superfamily)
PDCMJDCM_01196 1.3e-42 M Glycosyltransferase like family 2
PDCMJDCM_01199 2.6e-37 S Glycosyl transferase family 2
PDCMJDCM_01200 3.6e-143 M Glycosyl transferase family 2
PDCMJDCM_01201 6.8e-47 2.3.1.79 S Hexapeptide repeat of succinyl-transferase
PDCMJDCM_01202 1.9e-120 G Glycosyltransferase Family 4
PDCMJDCM_01203 9.7e-174 rgpAc GT4 M Domain of unknown function (DUF1972)
PDCMJDCM_01205 1.2e-77 S response to antibiotic
PDCMJDCM_01206 9.8e-27 S zinc-ribbon domain
PDCMJDCM_01207 9.4e-118 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
PDCMJDCM_01208 9.9e-128 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDCMJDCM_01209 6.2e-164 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDCMJDCM_01210 4.2e-101 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PDCMJDCM_01211 1.2e-144 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDCMJDCM_01212 1.3e-75 S Glycosyltransferase like family 2
PDCMJDCM_01213 2.5e-61 S Glycosyltransferase like family 2
PDCMJDCM_01214 2.6e-117 cps1D M Domain of unknown function (DUF4422)
PDCMJDCM_01215 3e-39 S CAAX protease self-immunity
PDCMJDCM_01216 9.1e-89 yvyE 3.4.13.9 S YigZ family
PDCMJDCM_01217 2.3e-58 S Haloacid dehalogenase-like hydrolase
PDCMJDCM_01218 2.9e-153 EGP Major facilitator Superfamily
PDCMJDCM_01220 5.3e-68 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDCMJDCM_01221 1.2e-27 yraB K transcriptional regulator
PDCMJDCM_01222 9.8e-90 S NADPH-dependent FMN reductase
PDCMJDCM_01223 1e-102 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDCMJDCM_01224 1.5e-55 S ECF transporter, substrate-specific component
PDCMJDCM_01225 2.5e-96 znuB U ABC 3 transport family
PDCMJDCM_01226 1e-98 fhuC P ABC transporter
PDCMJDCM_01227 1e-103 psaA P Belongs to the bacterial solute-binding protein 9 family
PDCMJDCM_01228 7.6e-38
PDCMJDCM_01229 6.5e-54 XK27_01040 S Protein of unknown function (DUF1129)
PDCMJDCM_01230 5.4e-190 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDCMJDCM_01231 3.4e-23 yyzM S Bacterial protein of unknown function (DUF951)
PDCMJDCM_01232 1.8e-108 spo0J K Belongs to the ParB family
PDCMJDCM_01233 6.5e-118 soj D Sporulation initiation inhibitor
PDCMJDCM_01234 1.4e-81 noc K Belongs to the ParB family
PDCMJDCM_01235 4e-101 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PDCMJDCM_01236 1.2e-126 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDCMJDCM_01237 3.2e-109 3.1.4.46 C phosphodiesterase
PDCMJDCM_01238 0.0 pacL 3.6.3.8 P P-type ATPase
PDCMJDCM_01239 3.4e-185 L Probable transposase
PDCMJDCM_01240 7.9e-62 yvdD 3.2.2.10 S Possible lysine decarboxylase
PDCMJDCM_01241 1.8e-72 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PDCMJDCM_01243 2.3e-63 srtA 3.4.22.70 M sortase family
PDCMJDCM_01244 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PDCMJDCM_01245 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PDCMJDCM_01246 1.1e-33
PDCMJDCM_01247 1.8e-141 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDCMJDCM_01248 1e-157 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDCMJDCM_01249 1.5e-96 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDCMJDCM_01250 4.7e-158 manA 5.3.1.8 G mannose-6-phosphate isomerase
PDCMJDCM_01251 1.1e-39 ybjQ S Belongs to the UPF0145 family
PDCMJDCM_01252 2.5e-08
PDCMJDCM_01253 8e-96 V ABC transporter, ATP-binding protein
PDCMJDCM_01254 1.1e-41 gntR1 K Transcriptional regulator, GntR family
PDCMJDCM_01255 6.4e-186 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PDCMJDCM_01256 2.8e-65 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDCMJDCM_01257 4.2e-261 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PDCMJDCM_01258 2.2e-107 terC P Integral membrane protein TerC family
PDCMJDCM_01259 1.6e-38 K Transcriptional regulator
PDCMJDCM_01260 1.3e-95 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PDCMJDCM_01261 4.1e-101 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDCMJDCM_01262 4.5e-102 tcyB E ABC transporter
PDCMJDCM_01264 3.2e-29 ponA V the current gene model (or a revised gene model) may contain a frame shift
PDCMJDCM_01265 6.1e-188 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDCMJDCM_01266 5.9e-303 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDCMJDCM_01267 4e-210 mtlR K Mga helix-turn-helix domain
PDCMJDCM_01268 9.8e-177 yjcE P Sodium proton antiporter
PDCMJDCM_01269 8.4e-104 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDCMJDCM_01270 4e-49 dhaM 2.7.1.121 S PTS system fructose IIA component
PDCMJDCM_01271 9.5e-69 dhaL 2.7.1.121 S Dak2
PDCMJDCM_01272 2e-151 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDCMJDCM_01273 1.9e-114 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDCMJDCM_01274 6.5e-61 K Bacterial regulatory proteins, tetR family
PDCMJDCM_01275 5.9e-210 brnQ U Component of the transport system for branched-chain amino acids
PDCMJDCM_01277 1.7e-111 endA F DNA RNA non-specific endonuclease
PDCMJDCM_01278 4.1e-75 XK27_02070 S Nitroreductase family
PDCMJDCM_01279 1.1e-193 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PDCMJDCM_01280 3.8e-33 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PDCMJDCM_01281 4.7e-294 lai 4.2.1.53 S Myosin-crossreactive antigen
PDCMJDCM_01282 9.4e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDCMJDCM_01283 5.5e-59 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PDCMJDCM_01284 2e-76 azlC E branched-chain amino acid
PDCMJDCM_01285 2e-31 azlD S Branched-chain amino acid transport protein (AzlD)
PDCMJDCM_01286 1.5e-56 ohrR K helix_turn_helix multiple antibiotic resistance protein
PDCMJDCM_01287 1.6e-55 jag S R3H domain protein
PDCMJDCM_01288 6.9e-54 K Transcriptional regulator C-terminal region
PDCMJDCM_01289 7.7e-44 thiT S Thiamine transporter protein (Thia_YuaJ)
PDCMJDCM_01290 3.4e-285 pepO 3.4.24.71 O Peptidase family M13
PDCMJDCM_01291 1.7e-111 dat 2.6.1.21 EH PFAM aminotransferase, class IV
PDCMJDCM_01292 1.7e-09 yvaZ S Protein of unknown function (DUF1648)
PDCMJDCM_01293 2.1e-69 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PDCMJDCM_01294 3.9e-47 hmpT S ECF-type riboflavin transporter, S component
PDCMJDCM_01295 5.1e-42 wecD K Acetyltransferase GNAT Family
PDCMJDCM_01297 1.2e-253 XK27_06780 V ABC transporter permease
PDCMJDCM_01298 6.4e-96 XK27_06785 V ABC transporter, ATP-binding protein
PDCMJDCM_01300 7.5e-72 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDCMJDCM_01301 6.9e-121 ytbE S reductase
PDCMJDCM_01302 4.2e-43 ytcD K HxlR-like helix-turn-helix
PDCMJDCM_01303 1.9e-101 ybbM S Uncharacterised protein family (UPF0014)
PDCMJDCM_01304 2e-67 ybbL S ABC transporter
PDCMJDCM_01305 8.1e-163 oxlT P Major Facilitator Superfamily
PDCMJDCM_01306 6.2e-53 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDCMJDCM_01307 3.1e-47 S Short repeat of unknown function (DUF308)
PDCMJDCM_01308 1.8e-30 tetR K Transcriptional regulator C-terminal region
PDCMJDCM_01309 1.2e-150 yfeX P Peroxidase
PDCMJDCM_01310 2.5e-16 S Protein of unknown function (DUF3021)
PDCMJDCM_01311 4.5e-39 K LytTr DNA-binding domain
PDCMJDCM_01312 7.6e-113 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PDCMJDCM_01313 8.4e-209 mmuP E amino acid
PDCMJDCM_01314 1.2e-15 psiE S Phosphate-starvation-inducible E
PDCMJDCM_01315 3.7e-155 oppF P Belongs to the ABC transporter superfamily
PDCMJDCM_01316 1.3e-180 oppD P Belongs to the ABC transporter superfamily
PDCMJDCM_01317 5.8e-170 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDCMJDCM_01318 1e-141 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PDCMJDCM_01319 6.9e-202 oppA E ABC transporter, substratebinding protein
PDCMJDCM_01320 9.1e-219 yifK E Amino acid permease
PDCMJDCM_01321 1.1e-85 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDCMJDCM_01322 8.2e-55 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PDCMJDCM_01323 5e-66 pgm3 G phosphoglycerate mutase family
PDCMJDCM_01324 1.5e-251 ctpA 3.6.3.54 P P-type ATPase
PDCMJDCM_01325 3.3e-21 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDCMJDCM_01326 1.5e-43 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDCMJDCM_01327 5.6e-150 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDCMJDCM_01328 1.2e-21 K transcriptional regulator
PDCMJDCM_01329 5e-77 hchA S intracellular protease amidase
PDCMJDCM_01330 2.8e-135 glpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PDCMJDCM_01331 3.1e-112 lacI3 K helix_turn _helix lactose operon repressor
PDCMJDCM_01332 5.5e-231 malL 3.2.1.10 GH13 G Psort location Cytoplasmic, score
PDCMJDCM_01333 2e-39 2.7.1.191 G PTS system fructose IIA component
PDCMJDCM_01334 2.4e-123 G PTS system mannose/fructose/sorbose family IID component
PDCMJDCM_01335 4.4e-101 G PTS system sorbose-specific iic component
PDCMJDCM_01336 2e-64 2.7.1.191 G PTS system sorbose subfamily IIB component
PDCMJDCM_01337 1.9e-80 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PDCMJDCM_01338 2.8e-139 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDCMJDCM_01339 2e-201 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PDCMJDCM_01340 6.5e-117 pepL 3.4.11.5 E Releases the N-terminal proline from various substrates
PDCMJDCM_01341 2.6e-197 1.3.5.4 C FMN_bind
PDCMJDCM_01342 2.2e-56 3.1.3.48 K Transcriptional regulator
PDCMJDCM_01343 3.8e-161 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PDCMJDCM_01344 4.5e-196 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PDCMJDCM_01345 3.7e-74 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PDCMJDCM_01346 9.3e-129 yxjG 2.1.1.14 E Cobalamin-independent synthase, Catalytic domain
PDCMJDCM_01347 1.6e-100 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PDCMJDCM_01348 2.8e-81 S Belongs to the UPF0246 family
PDCMJDCM_01349 7.4e-10 S CAAX protease self-immunity
PDCMJDCM_01350 3.5e-59 ykhA 3.1.2.20 I Thioesterase superfamily
PDCMJDCM_01351 8.7e-157 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDCMJDCM_01353 1.6e-230 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDCMJDCM_01354 5.3e-64 C FMN binding
PDCMJDCM_01355 1.3e-204 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDCMJDCM_01356 1.7e-54 rplI J Binds to the 23S rRNA
PDCMJDCM_01357 3.9e-263 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PDCMJDCM_01358 4.7e-07
PDCMJDCM_01364 5.1e-08
PDCMJDCM_01365 1.5e-30 tnp L MULE transposase domain
PDCMJDCM_01367 5.1e-260 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDCMJDCM_01368 1.6e-169 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDCMJDCM_01369 7.8e-131 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDCMJDCM_01370 3e-282 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDCMJDCM_01371 1.5e-76 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDCMJDCM_01372 1.9e-96 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDCMJDCM_01373 1.1e-40 yabR J RNA binding
PDCMJDCM_01374 1e-21 divIC D Septum formation initiator
PDCMJDCM_01375 3.6e-31 yabO J S4 domain protein
PDCMJDCM_01376 1.2e-139 yabM S Polysaccharide biosynthesis protein
PDCMJDCM_01377 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDCMJDCM_01378 2.2e-75 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDCMJDCM_01379 1.8e-157 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDCMJDCM_01380 2.5e-86 S (CBS) domain
PDCMJDCM_01381 1.4e-141 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDCMJDCM_01382 1.1e-207 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDCMJDCM_01383 7.2e-53 perR P Belongs to the Fur family
PDCMJDCM_01384 7.6e-58 S LexA-binding, inner membrane-associated putative hydrolase
PDCMJDCM_01385 7.9e-106 sbcC L Putative exonuclease SbcCD, C subunit
PDCMJDCM_01386 9.8e-115 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDCMJDCM_01387 6.8e-35 M LysM domain protein
PDCMJDCM_01388 1.1e-277 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDCMJDCM_01389 1.4e-85 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PDCMJDCM_01390 4.2e-33 ygfC K transcriptional regulator (TetR family)
PDCMJDCM_01391 2.6e-109 hrtB V ABC transporter permease
PDCMJDCM_01392 4e-87 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PDCMJDCM_01393 0.0 helD 3.6.4.12 L DNA helicase
PDCMJDCM_01394 3.1e-246 yjbQ P TrkA C-terminal domain protein
PDCMJDCM_01395 5.7e-28
PDCMJDCM_01396 1.1e-60 rpsI J Belongs to the universal ribosomal protein uS9 family
PDCMJDCM_01397 5.5e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDCMJDCM_01398 1.2e-124 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDCMJDCM_01399 2.8e-108 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDCMJDCM_01400 6.7e-111 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDCMJDCM_01401 1.8e-100 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDCMJDCM_01402 4.8e-53 rplQ J Ribosomal protein L17
PDCMJDCM_01403 1.3e-155 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDCMJDCM_01404 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDCMJDCM_01405 4.4e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDCMJDCM_01406 2.5e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PDCMJDCM_01407 4.8e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDCMJDCM_01408 3.4e-107 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDCMJDCM_01409 4.4e-207 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDCMJDCM_01410 1e-67 rplO J Binds to the 23S rRNA
PDCMJDCM_01411 2.1e-22 rpmD J Ribosomal protein L30
PDCMJDCM_01412 1.3e-82 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDCMJDCM_01413 9.6e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDCMJDCM_01414 3.2e-87 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDCMJDCM_01415 2.5e-65 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDCMJDCM_01416 4.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDCMJDCM_01417 1.3e-91 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDCMJDCM_01418 7e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDCMJDCM_01419 5.1e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDCMJDCM_01420 8e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDCMJDCM_01421 9e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PDCMJDCM_01422 6.2e-73 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDCMJDCM_01423 2e-115 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDCMJDCM_01424 1.5e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDCMJDCM_01425 1e-44 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDCMJDCM_01426 4.1e-142 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDCMJDCM_01427 2.9e-39 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDCMJDCM_01428 3.8e-100 rplD J Forms part of the polypeptide exit tunnel
PDCMJDCM_01429 4.5e-109 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDCMJDCM_01430 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PDCMJDCM_01431 4.3e-167 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDCMJDCM_01432 2.5e-78 K rpiR family
PDCMJDCM_01433 2.6e-54 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PDCMJDCM_01434 3.2e-146 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PDCMJDCM_01435 6.5e-21 K Acetyltransferase (GNAT) domain
PDCMJDCM_01436 9e-184 steT E amino acid
PDCMJDCM_01437 9.6e-78 glnP P ABC transporter permease
PDCMJDCM_01438 1.2e-85 gluC P ABC transporter permease
PDCMJDCM_01439 1.9e-99 glnH ET ABC transporter
PDCMJDCM_01440 3.7e-102 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDCMJDCM_01441 1.3e-09
PDCMJDCM_01442 5e-98
PDCMJDCM_01443 3e-12 3.2.1.14 GH18
PDCMJDCM_01444 5.4e-53 zur P Belongs to the Fur family
PDCMJDCM_01445 6.3e-212 yfnA E Amino Acid
PDCMJDCM_01446 9.6e-251 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDCMJDCM_01447 0.0 L Helicase C-terminal domain protein
PDCMJDCM_01448 2.7e-79 ptp2 3.1.3.48 T Tyrosine phosphatase family
PDCMJDCM_01449 2.1e-180 yhdP S Transporter associated domain
PDCMJDCM_01450 4.8e-26
PDCMJDCM_01451 3.7e-75 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDCMJDCM_01452 9.6e-132 bacI V MacB-like periplasmic core domain
PDCMJDCM_01453 9.6e-97 V ABC transporter
PDCMJDCM_01454 2.2e-63 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PDCMJDCM_01455 1.4e-156 gmuE 2.7.1.2, 2.7.1.4 GK ROK family
PDCMJDCM_01456 1.8e-139 V MatE
PDCMJDCM_01457 1.6e-43 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDCMJDCM_01458 5e-87 S Alpha beta hydrolase
PDCMJDCM_01459 1.6e-94 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDCMJDCM_01460 5.6e-174 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDCMJDCM_01461 4.6e-112 argE 3.5.1.18 E Peptidase dimerisation domain
PDCMJDCM_01462 5e-102 IQ Enoyl-(Acyl carrier protein) reductase
PDCMJDCM_01463 2.5e-33 XK27_01315 S Protein of unknown function (DUF2829)
PDCMJDCM_01464 4.3e-54 queT S QueT transporter
PDCMJDCM_01466 7.3e-65 degV S Uncharacterised protein, DegV family COG1307
PDCMJDCM_01467 2e-21 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDCMJDCM_01468 2.7e-21 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDCMJDCM_01469 1.9e-34 trxA O Belongs to the thioredoxin family
PDCMJDCM_01470 4.9e-87 S Sucrose-6F-phosphate phosphohydrolase
PDCMJDCM_01471 3.2e-121 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDCMJDCM_01472 2.8e-49 S Threonine/Serine exporter, ThrE
PDCMJDCM_01473 1.3e-81 thrE S Putative threonine/serine exporter
PDCMJDCM_01474 3.1e-27 cspC K Cold shock protein
PDCMJDCM_01475 8.3e-90 sirR K Helix-turn-helix diphteria tox regulatory element
PDCMJDCM_01476 2.9e-93 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PDCMJDCM_01477 5.4e-23
PDCMJDCM_01478 1.2e-58 3.6.1.27 I phosphatase
PDCMJDCM_01479 3.1e-25
PDCMJDCM_01480 2.4e-65 I alpha/beta hydrolase fold
PDCMJDCM_01481 1.3e-38 azlD S branched-chain amino acid
PDCMJDCM_01482 1.1e-104 azlC E AzlC protein
PDCMJDCM_01483 1.6e-17
PDCMJDCM_01484 1.3e-119 xth 3.1.11.2 L exodeoxyribonuclease III
PDCMJDCM_01485 3.8e-99 V domain protein
PDCMJDCM_01486 3.9e-10
PDCMJDCM_01490 6.2e-43 S virion core protein, lumpy skin disease virus
PDCMJDCM_01491 2.1e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDCMJDCM_01492 9.9e-174 malY 4.4.1.8 E Aminotransferase, class I
PDCMJDCM_01493 5.3e-118 K AI-2E family transporter
PDCMJDCM_01494 4e-61 EG EamA-like transporter family
PDCMJDCM_01495 3.9e-76 L haloacid dehalogenase-like hydrolase
PDCMJDCM_01496 5.8e-117 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDCMJDCM_01497 9.1e-67 1.5.1.38 S NADPH-dependent FMN reductase
PDCMJDCM_01498 2.2e-184 L Probable transposase
PDCMJDCM_01499 8.3e-164 C Luciferase-like monooxygenase
PDCMJDCM_01500 3.6e-41 K Transcriptional regulator, HxlR family
PDCMJDCM_01501 1.7e-171 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDCMJDCM_01502 1.2e-103 ydhQ K UbiC transcription regulator-associated domain protein
PDCMJDCM_01503 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDCMJDCM_01504 2.4e-82 pncA Q isochorismatase
PDCMJDCM_01505 3.5e-63 3.1.3.73 G phosphoglycerate mutase
PDCMJDCM_01506 9.5e-259 treB G phosphotransferase system
PDCMJDCM_01507 4.8e-83 treR K UTRA
PDCMJDCM_01508 6.3e-251 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PDCMJDCM_01509 6.4e-168 mdtG EGP Major facilitator Superfamily
PDCMJDCM_01511 1.5e-194 XK27_08315 M Sulfatase
PDCMJDCM_01512 2.9e-93 yihY S Belongs to the UPF0761 family
PDCMJDCM_01513 2.8e-12 mltD CBM50 M Lysin motif
PDCMJDCM_01514 1.2e-152 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PDCMJDCM_01515 1.2e-143 map 3.4.11.18 E Methionine Aminopeptidase
PDCMJDCM_01516 5.1e-54 fld C Flavodoxin
PDCMJDCM_01517 8.7e-53 gtcA S Teichoic acid glycosylation protein
PDCMJDCM_01518 0.0 S Bacterial membrane protein YfhO
PDCMJDCM_01519 5.2e-120 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
PDCMJDCM_01520 1.7e-122 S Sulfite exporter TauE/SafE
PDCMJDCM_01521 1.1e-70 K Sugar-specific transcriptional regulator TrmB
PDCMJDCM_01522 9.3e-169 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDCMJDCM_01523 3.5e-182 pepS E Thermophilic metalloprotease (M29)
PDCMJDCM_01524 3e-266 E Amino acid permease
PDCMJDCM_01525 4.9e-85 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PDCMJDCM_01526 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PDCMJDCM_01527 2.9e-78 galM 5.1.3.3 G Aldose 1-epimerase
PDCMJDCM_01528 4.3e-213 malT G Transporter, major facilitator family protein
PDCMJDCM_01529 4.2e-101 malR K Transcriptional regulator, LacI family
PDCMJDCM_01530 8.7e-279 kup P Transport of potassium into the cell
PDCMJDCM_01532 2e-20 S Domain of unknown function (DUF3284)
PDCMJDCM_01533 5.2e-160 yfmL L DEAD DEAH box helicase
PDCMJDCM_01534 7e-128 mocA S Oxidoreductase
PDCMJDCM_01535 2e-24 S Domain of unknown function (DUF4828)
PDCMJDCM_01536 1.2e-175 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PDCMJDCM_01537 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDCMJDCM_01538 4.7e-194 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PDCMJDCM_01539 1.4e-119 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PDCMJDCM_01540 4.2e-161 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDCMJDCM_01541 2.8e-266 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDCMJDCM_01542 3.6e-220 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PDCMJDCM_01543 4.9e-42 O ADP-ribosylglycohydrolase
PDCMJDCM_01544 5.5e-221 gdhA 1.4.1.4 E Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PDCMJDCM_01545 6.4e-209 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PDCMJDCM_01546 9.7e-35 K GNAT family
PDCMJDCM_01547 1.7e-40
PDCMJDCM_01549 4.7e-159 mgtE P Acts as a magnesium transporter
PDCMJDCM_01550 7.6e-94 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PDCMJDCM_01551 1.3e-116 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDCMJDCM_01552 2.5e-94 yjbM 2.7.6.5 S RelA SpoT domain protein
PDCMJDCM_01553 9e-255 topB 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PDCMJDCM_01554 1.7e-35 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDCMJDCM_01555 6.3e-193 pbuX F xanthine permease
PDCMJDCM_01556 9.7e-74 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDCMJDCM_01557 1.6e-61 acmC 3.2.1.96 NU mannosyl-glycoprotein
PDCMJDCM_01558 5.5e-64 S ECF transporter, substrate-specific component
PDCMJDCM_01559 1.7e-126 mleP S Sodium Bile acid symporter family
PDCMJDCM_01560 1.7e-248 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PDCMJDCM_01561 1.8e-71 mleR K LysR family
PDCMJDCM_01562 1.1e-56 K transcriptional
PDCMJDCM_01563 5.9e-41 K Bacterial regulatory proteins, tetR family
PDCMJDCM_01564 6.1e-60 T Belongs to the universal stress protein A family
PDCMJDCM_01565 8.1e-44 K Copper transport repressor CopY TcrY
PDCMJDCM_01566 2.1e-116 3.2.1.18 GH33 M Rib/alpha-like repeat
PDCMJDCM_01567 1.4e-113 3.2.1.18 GH33 M Rib/alpha-like repeat
PDCMJDCM_01569 1.9e-95 ypuA S Protein of unknown function (DUF1002)
PDCMJDCM_01570 8.4e-60 dedA 3.1.3.1 S SNARE associated Golgi protein
PDCMJDCM_01571 1.4e-162 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDCMJDCM_01572 4.6e-36 yncA 2.3.1.79 S Maltose acetyltransferase
PDCMJDCM_01573 5.3e-206 yflS P Sodium:sulfate symporter transmembrane region
PDCMJDCM_01574 7.2e-200 frdC 1.3.5.4 C FAD binding domain
PDCMJDCM_01575 3.9e-238 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDCMJDCM_01576 2e-14 ybaN S Protein of unknown function (DUF454)
PDCMJDCM_01577 8.2e-177 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PDCMJDCM_01578 8.8e-58 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDCMJDCM_01579 2.8e-96 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDCMJDCM_01580 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PDCMJDCM_01581 5.1e-72 ywlG S Belongs to the UPF0340 family
PDCMJDCM_01582 5.2e-65 S Acetyltransferase (GNAT) domain
PDCMJDCM_01584 3.5e-50 K Cro/C1-type HTH DNA-binding domain
PDCMJDCM_01585 1.6e-174 spoVK O ATPase family associated with various cellular activities (AAA)
PDCMJDCM_01588 8.3e-126 S Bacteriophage abortive infection AbiH
PDCMJDCM_01589 4.5e-86 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain protein
PDCMJDCM_01590 3.2e-37 hsdM 2.1.1.72 V type I restriction-modification system
PDCMJDCM_01591 1.3e-162 hsdM 2.1.1.72 V cog cog0286
PDCMJDCM_01592 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PDCMJDCM_01593 5.4e-19 K Cro/C1-type HTH DNA-binding domain
PDCMJDCM_01594 9.1e-78 L AAA domain
PDCMJDCM_01595 4.1e-16
PDCMJDCM_01596 3e-22
PDCMJDCM_01597 1.3e-75 K phage regulatory protein, rha family
PDCMJDCM_01598 1.3e-17
PDCMJDCM_01599 1.4e-121 L Mrr N-terminal domain
PDCMJDCM_01600 9.9e-210 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDCMJDCM_01601 9.8e-146 yegS 2.7.1.107 G Lipid kinase
PDCMJDCM_01602 2.8e-255 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDCMJDCM_01603 4e-233 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDCMJDCM_01604 7.6e-38 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDCMJDCM_01605 9.3e-161 camS S sex pheromone
PDCMJDCM_01606 1.3e-279 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDCMJDCM_01607 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PDCMJDCM_01608 4.2e-145 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDCMJDCM_01611 2e-216 yjeM E Amino Acid
PDCMJDCM_01612 5.3e-62 yphA GM NAD dependent epimerase/dehydratase family
PDCMJDCM_01613 1.9e-75 K Helix-turn-helix domain, rpiR family
PDCMJDCM_01614 2.5e-92 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PDCMJDCM_01615 2.3e-127 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PDCMJDCM_01616 2.2e-90 nanK GK ROK family
PDCMJDCM_01617 3.8e-54 ndk 2.7.4.6 F Belongs to the NDK family
PDCMJDCM_01618 1.2e-63 G Xylose isomerase domain protein TIM barrel
PDCMJDCM_01619 1.1e-153 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDCMJDCM_01620 1.3e-199 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDCMJDCM_01621 1.7e-73 L PFAM transposase IS200-family protein
PDCMJDCM_01622 5e-74 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PDCMJDCM_01623 4.7e-112 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PDCMJDCM_01624 7.7e-41 S Iron-sulfur cluster assembly protein
PDCMJDCM_01625 1.3e-66 S Protein of unknown function (DUF1440)
PDCMJDCM_01626 7.7e-82 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PDCMJDCM_01627 9.2e-188 mtnE 2.6.1.83 E Aminotransferase
PDCMJDCM_01629 2.7e-15
PDCMJDCM_01630 6.6e-87 S Haloacid dehalogenase-like hydrolase
PDCMJDCM_01631 1.1e-37 blpT
PDCMJDCM_01634 5.5e-08
PDCMJDCM_01636 1.1e-16
PDCMJDCM_01641 6.6e-13 2.7.13.3 T GHKL domain
PDCMJDCM_01642 4.7e-23 2.7.13.3 T GHKL domain
PDCMJDCM_01643 9.6e-56 K LytTr DNA-binding domain
PDCMJDCM_01648 1.4e-70 xerD L Phage integrase, N-terminal SAM-like domain
PDCMJDCM_01649 4.8e-266 fbp 3.1.3.11 G phosphatase activity
PDCMJDCM_01650 1.9e-20 M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
PDCMJDCM_01651 6.2e-171 tonB M YSIRK type signal peptide
PDCMJDCM_01652 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDCMJDCM_01653 3e-98 fabK 1.3.1.9 S Nitronate monooxygenase
PDCMJDCM_01654 4.7e-163 ytbD EGP Major facilitator Superfamily
PDCMJDCM_01655 4e-110 IQ NAD dependent epimerase/dehydratase family
PDCMJDCM_01656 5.8e-104 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
PDCMJDCM_01657 4.5e-43 gutM K Glucitol operon activator protein (GutM)
PDCMJDCM_01658 4.8e-83 srlA G PTS system enzyme II sorbitol-specific factor
PDCMJDCM_01659 1.4e-136 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PDCMJDCM_01660 2.4e-36 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDCMJDCM_01661 2e-62 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
PDCMJDCM_01662 5.5e-117 ldhA 1.1.1.28 CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PDCMJDCM_01663 2.5e-136 pfoS S Phosphotransferase system, EIIC
PDCMJDCM_01665 2.6e-207 spaB S Lantibiotic dehydratase, C terminus
PDCMJDCM_01666 4.3e-184 spaT V ATPases associated with a variety of cellular activities
PDCMJDCM_01667 2.2e-75 spaC2 V Lanthionine synthetase C-like protein
PDCMJDCM_01668 8.8e-90 KT Transcriptional regulatory protein, C terminal
PDCMJDCM_01669 1.7e-105 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PDCMJDCM_01670 1.1e-73 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
PDCMJDCM_01671 9.6e-47 V ABC-2 family transporter protein
PDCMJDCM_01673 2.5e-27 K Helix-turn-helix XRE-family like proteins
PDCMJDCM_01674 7.7e-20 S protein encoded in hypervariable junctions of pilus gene clusters
PDCMJDCM_01676 4.9e-224 E ABC transporter, substratebinding protein
PDCMJDCM_01677 3.6e-116 sufC O FeS assembly ATPase SufC
PDCMJDCM_01678 5.6e-143 sufD O FeS assembly protein SufD
PDCMJDCM_01679 3.3e-148 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDCMJDCM_01680 4.9e-41 nifU C SUF system FeS assembly protein, NifU family
PDCMJDCM_01681 9.4e-240 sufB O assembly protein SufB
PDCMJDCM_01682 3.3e-45 S VIT family
PDCMJDCM_01683 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PDCMJDCM_01684 1.5e-136 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDCMJDCM_01685 2.1e-112 rssA S Phospholipase, patatin family
PDCMJDCM_01686 8.2e-16
PDCMJDCM_01687 1.5e-29
PDCMJDCM_01688 2.3e-79 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PDCMJDCM_01689 1.2e-99 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDCMJDCM_01690 1.8e-08 K transcriptional
PDCMJDCM_01691 3.4e-10 S Protein of unknown function (DUF805)
PDCMJDCM_01693 1.5e-78 yvfR V ABC transporter
PDCMJDCM_01694 1.9e-53 yvfS V ABC-2 type transporter
PDCMJDCM_01695 5.4e-57 salK 2.7.13.3 T Histidine kinase
PDCMJDCM_01696 2.4e-75 desR K helix_turn_helix, Lux Regulon
PDCMJDCM_01697 1.4e-70 ptp3 3.1.3.48 T Tyrosine phosphatase family
PDCMJDCM_01698 1.6e-90 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PDCMJDCM_01702 1.4e-142 xerS L Phage integrase family
PDCMJDCM_01703 3.8e-70 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PDCMJDCM_01704 6.5e-138 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PDCMJDCM_01705 1.6e-217 1.3.5.4 C FAD binding domain
PDCMJDCM_01706 4.6e-117 IQ Enoyl-(Acyl carrier protein) reductase
PDCMJDCM_01707 1.6e-138 G Xylose isomerase-like TIM barrel
PDCMJDCM_01708 1.3e-72 K Transcriptional regulator, LysR family
PDCMJDCM_01709 1.4e-98 EGP Major Facilitator Superfamily
PDCMJDCM_01710 2.6e-129 EGP Major Facilitator Superfamily
PDCMJDCM_01711 2.7e-81 L Integrase core domain
PDCMJDCM_01712 1.8e-20 L PFAM transposase IS3 IS911 family protein
PDCMJDCM_01713 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PDCMJDCM_01714 1.7e-32 P Heavy-metal-associated domain
PDCMJDCM_01715 8e-119 rny D peptidase
PDCMJDCM_01716 2.1e-77 S Phage tail protein
PDCMJDCM_01717 2.1e-286 M Phage tail tape measure protein TP901
PDCMJDCM_01719 9.8e-17 S Phage tail assembly chaperone proteins, TAC
PDCMJDCM_01720 3.5e-78 S Phage tail tube protein
PDCMJDCM_01721 3.3e-54 S Protein of unknown function (DUF806)
PDCMJDCM_01722 2.7e-51 S Bacteriophage HK97-gp10, putative tail-component
PDCMJDCM_01723 4.5e-53 S Phage head-tail joining protein
PDCMJDCM_01724 4.1e-21 S Phage gp6-like head-tail connector protein
PDCMJDCM_01725 4.2e-196 S Phage capsid family
PDCMJDCM_01726 1.6e-113 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PDCMJDCM_01727 2.6e-198 S Phage portal protein
PDCMJDCM_01729 0.0 S Phage Terminase
PDCMJDCM_01730 4.3e-83 L Phage terminase, small subunit
PDCMJDCM_01731 1.1e-71 L HNH nucleases
PDCMJDCM_01733 6.1e-55 V Abi-like protein
PDCMJDCM_01734 1.4e-32 arpU S Phage transcriptional regulator, ArpU family
PDCMJDCM_01743 9.4e-66
PDCMJDCM_01744 1.2e-25
PDCMJDCM_01747 3.8e-30 L N-terminal phage replisome organiser (Phage_rep_org_N)
PDCMJDCM_01748 1.8e-53 S Putative HNHc nuclease
PDCMJDCM_01755 5.4e-43 S DNA binding
PDCMJDCM_01756 8.9e-14 cro K Helix-turn-helix XRE-family like proteins
PDCMJDCM_01759 6.4e-14 K Cro/C1-type HTH DNA-binding domain
PDCMJDCM_01761 1.6e-39 XK27_10050 K Peptidase S24-like
PDCMJDCM_01764 2.4e-10
PDCMJDCM_01765 7.6e-67 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PDCMJDCM_01766 4.2e-22
PDCMJDCM_01767 8.3e-84 S Domain of unknown function DUF1829
PDCMJDCM_01768 5.6e-89 sip L Belongs to the 'phage' integrase family
PDCMJDCM_01770 1.3e-155 amtB P ammonium transporter
PDCMJDCM_01771 2.8e-117 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDCMJDCM_01772 6.6e-46 argR K Regulates arginine biosynthesis genes
PDCMJDCM_01773 4.2e-134 arcT 2.6.1.1 E Cys/Met metabolism PLP-dependent enzyme
PDCMJDCM_01774 1.7e-90 S Alpha/beta hydrolase of unknown function (DUF915)
PDCMJDCM_01775 1.2e-22 veg S Biofilm formation stimulator VEG
PDCMJDCM_01776 3.4e-134 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDCMJDCM_01777 1.7e-86 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDCMJDCM_01778 8.3e-105 tatD L hydrolase, TatD family
PDCMJDCM_01779 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDCMJDCM_01780 4.3e-127
PDCMJDCM_01781 3.5e-153 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PDCMJDCM_01782 7.2e-43 VPA1512 ET Bacterial extracellular solute-binding proteins, family 3
PDCMJDCM_01783 2.3e-31 K Transcriptional regulator
PDCMJDCM_01784 3.5e-104 ybhR V ABC transporter
PDCMJDCM_01785 8.4e-83 ybhF_2 V abc transporter atp-binding protein
PDCMJDCM_01786 9.4e-103 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDCMJDCM_01787 2.3e-171 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDCMJDCM_01788 9.3e-128 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDCMJDCM_01789 2.3e-272 helD 3.6.4.12 L DNA helicase
PDCMJDCM_01791 1.3e-114 htpX O Belongs to the peptidase M48B family
PDCMJDCM_01792 1.5e-71 lemA S LemA family
PDCMJDCM_01793 1.1e-54 L phosphatase homologous to the C-terminal domain of histone macroH2A1
PDCMJDCM_01794 3.2e-45 yjcF K protein acetylation
PDCMJDCM_01796 3.3e-253 yfiC V ABC transporter
PDCMJDCM_01797 1.6e-172 lmrA V ABC transporter, ATP-binding protein
PDCMJDCM_01798 4.6e-37 lmrA V ABC transporter, ATP-binding protein
PDCMJDCM_01799 5.8e-35 K Bacterial regulatory proteins, tetR family
PDCMJDCM_01800 7.3e-246 yhcA V ABC transporter, ATP-binding protein
PDCMJDCM_01801 7e-224 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDCMJDCM_01802 4.3e-116 G Transporter, major facilitator family protein
PDCMJDCM_01803 1.9e-20 G Transporter, major facilitator family protein
PDCMJDCM_01804 2.2e-90 lacX 5.1.3.3 G Aldose 1-epimerase
PDCMJDCM_01805 3.3e-142 hpk31 2.7.13.3 T Histidine kinase
PDCMJDCM_01806 9.7e-113 K response regulator
PDCMJDCM_01807 1.2e-89 patB 4.4.1.8 E Aminotransferase, class I
PDCMJDCM_01808 1.3e-91 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PDCMJDCM_01809 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDCMJDCM_01810 1.3e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDCMJDCM_01811 6.1e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDCMJDCM_01812 3.3e-23 pilD 3.4.23.43 NOU aspartic-type endopeptidase activity
PDCMJDCM_01813 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDCMJDCM_01814 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDCMJDCM_01815 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDCMJDCM_01816 1.6e-55 ctsR K Belongs to the CtsR family
PDCMJDCM_01818 2.5e-119 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDCMJDCM_01819 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDCMJDCM_01820 3.7e-159 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDCMJDCM_01821 3.3e-186 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDCMJDCM_01831 4.8e-190 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDCMJDCM_01832 1.9e-243 lysP E amino acid
PDCMJDCM_01833 2.3e-69 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PDCMJDCM_01834 3.3e-271 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PDCMJDCM_01835 3.2e-14 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDCMJDCM_01836 7.2e-57 lssY 3.6.1.27 I phosphatidate phosphatase activity
PDCMJDCM_01837 1.7e-82 lysR5 K LysR substrate binding domain
PDCMJDCM_01838 6.5e-119 yxaA S membrane transporter protein
PDCMJDCM_01839 2.6e-32 ywjH S Protein of unknown function (DUF1634)
PDCMJDCM_01840 4.1e-126 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDCMJDCM_01841 1.7e-225 pipD E Dipeptidase
PDCMJDCM_01842 2.3e-21 K helix_turn_helix multiple antibiotic resistance protein
PDCMJDCM_01843 8.8e-166 EGP Major facilitator Superfamily
PDCMJDCM_01844 5.6e-82 S L,D-transpeptidase catalytic domain
PDCMJDCM_01845 3.5e-141 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PDCMJDCM_01846 1.5e-144 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PDCMJDCM_01847 7.2e-27 ydiI Q Thioesterase superfamily
PDCMJDCM_01848 1.2e-56 yfeJ 6.3.5.2 F glutamine amidotransferase
PDCMJDCM_01849 1.1e-148 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PDCMJDCM_01850 6.4e-114 degV S EDD domain protein, DegV family
PDCMJDCM_01851 1.8e-163 cadA P P-type ATPase
PDCMJDCM_01852 2.8e-41 cadA P P-type ATPase
PDCMJDCM_01853 1.8e-254 E Amino acid permease
PDCMJDCM_01854 3e-82 S Membrane
PDCMJDCM_01855 9.1e-50 cps3F
PDCMJDCM_01856 1.2e-145 Q Imidazolonepropionase and related amidohydrolases
PDCMJDCM_01857 1e-149 E glutamate:sodium symporter activity
PDCMJDCM_01858 5.5e-144 dapE 3.5.1.18 E Peptidase dimerisation domain
PDCMJDCM_01859 4.8e-282 fruA 2.7.1.202 GT Phosphotransferase System
PDCMJDCM_01860 4.1e-151 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PDCMJDCM_01861 4.5e-87 fruR K DeoR C terminal sensor domain
PDCMJDCM_01862 2.1e-220 XK27_08635 S UPF0210 protein
PDCMJDCM_01863 4.1e-27 gcvR T Belongs to the UPF0237 family
PDCMJDCM_01864 1.4e-38
PDCMJDCM_01865 5.7e-78 E GDSL-like Lipase/Acylhydrolase family
PDCMJDCM_01866 9.2e-56 S Protein of unknown function (DUF975)
PDCMJDCM_01867 2.1e-148 lplA 6.3.1.20 H Lipoate-protein ligase
PDCMJDCM_01868 4e-230 lpdA 1.8.1.4 C Dehydrogenase
PDCMJDCM_01869 2.6e-180 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDCMJDCM_01870 6.3e-166 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PDCMJDCM_01871 4.7e-178 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PDCMJDCM_01874 1.8e-53 S Protein of unknown function (DUF4256)
PDCMJDCM_01875 2.5e-128 metQ M Belongs to the nlpA lipoprotein family
PDCMJDCM_01876 2.4e-31 metI U ABC transporter permease
PDCMJDCM_01877 2.3e-150 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDCMJDCM_01879 6.3e-264 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PDCMJDCM_01880 8.1e-172 npr 1.11.1.1 S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PDCMJDCM_01881 1.7e-106 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
PDCMJDCM_01882 2.5e-83 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PDCMJDCM_01883 3e-84 drgA C nitroreductase
PDCMJDCM_01884 4.4e-134 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDCMJDCM_01885 2.7e-70 metI P ABC transporter permease
PDCMJDCM_01886 1.5e-149 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDCMJDCM_01887 7.4e-107 metQ1 P Belongs to the nlpA lipoprotein family
PDCMJDCM_01888 2.9e-143 E methionine synthase, vitamin-B12 independent
PDCMJDCM_01889 3.6e-46 yphJ 4.1.1.44 S decarboxylase
PDCMJDCM_01890 9.7e-60 yphH S Cupin domain
PDCMJDCM_01891 2.2e-47 C Flavodoxin
PDCMJDCM_01892 6.1e-56 S CAAX protease self-immunity
PDCMJDCM_01893 1.2e-102 pgm3 G phosphoglycerate mutase
PDCMJDCM_01894 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDCMJDCM_01895 4.2e-224 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDCMJDCM_01896 1.2e-53 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDCMJDCM_01897 2.8e-66 M ErfK YbiS YcfS YnhG
PDCMJDCM_01898 6.7e-107 XK27_08845 S ABC transporter, ATP-binding protein
PDCMJDCM_01899 3.3e-113 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PDCMJDCM_01900 3.5e-132 ABC-SBP S ABC transporter
PDCMJDCM_01901 1.3e-159 potD P ABC transporter
PDCMJDCM_01902 1.7e-103 potC U Binding-protein-dependent transport system inner membrane component
PDCMJDCM_01903 1.5e-120 potB P ABC transporter permease
PDCMJDCM_01904 1.1e-166 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDCMJDCM_01905 4.3e-100 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDCMJDCM_01906 1.3e-260 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PDCMJDCM_01907 1.2e-235 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDCMJDCM_01908 5.1e-13 S Enterocin A Immunity
PDCMJDCM_01910 2.2e-16 pspC KT PspC domain
PDCMJDCM_01911 1.2e-15 S Putative adhesin
PDCMJDCM_01912 3.2e-19 XK27_06920 S Protein of unknown function (DUF1700)
PDCMJDCM_01913 7.8e-38 K transcriptional regulator PadR family
PDCMJDCM_01914 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDCMJDCM_01915 6.8e-26 ykuJ S Protein of unknown function (DUF1797)
PDCMJDCM_01916 1.7e-129 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDCMJDCM_01917 5.4e-128 cpoA GT4 M Glycosyltransferase, group 1 family protein
PDCMJDCM_01918 8.8e-162 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PDCMJDCM_01919 2.4e-285 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDCMJDCM_01920 9.7e-37 ptsH G phosphocarrier protein HPR
PDCMJDCM_01921 1.5e-15
PDCMJDCM_01922 0.0 clpE O Belongs to the ClpA ClpB family
PDCMJDCM_01923 6.6e-23 XK27_09445 S Domain of unknown function (DUF1827)
PDCMJDCM_01924 2.9e-105 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
PDCMJDCM_01925 0.0 rafA 3.2.1.22 G alpha-galactosidase
PDCMJDCM_01926 1.6e-200 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PDCMJDCM_01927 2.3e-163 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDCMJDCM_01928 2.6e-179 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDCMJDCM_01929 5.9e-111 galR K Transcriptional regulator
PDCMJDCM_01930 4e-289 lacS G Transporter
PDCMJDCM_01931 0.0 lacL 3.2.1.23 G -beta-galactosidase
PDCMJDCM_01932 5.2e-279 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDCMJDCM_01933 3e-108 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PDCMJDCM_01934 6.5e-158 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PDCMJDCM_01935 3.4e-91 yueF S AI-2E family transporter
PDCMJDCM_01936 2.6e-97 ygaC J Belongs to the UPF0374 family
PDCMJDCM_01937 9.4e-192 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDCMJDCM_01938 2.9e-68 recX 2.4.1.337 GT4 S Regulatory protein RecX
PDCMJDCM_01939 1.1e-19 yvrI K RNA polymerase sigma factor, sigma-70 family
PDCMJDCM_01940 7e-23 S Cytochrome B5
PDCMJDCM_01941 2.3e-48 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain (presumed)
PDCMJDCM_01942 7.6e-60
PDCMJDCM_01943 1.3e-43 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDCMJDCM_01944 3.8e-156 nrnB S DHHA1 domain
PDCMJDCM_01945 1.5e-91 yunF F Protein of unknown function DUF72
PDCMJDCM_01946 3.4e-48 ndoA L Toxic component of a toxin-antitoxin (TA) module
PDCMJDCM_01947 5.4e-13
PDCMJDCM_01948 4.8e-146 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDCMJDCM_01949 1.6e-30 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDCMJDCM_01950 3.4e-208 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDCMJDCM_01951 4.1e-179 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDCMJDCM_01952 4.9e-65 S Uncharacterized protein conserved in bacteria (DUF2263)
PDCMJDCM_01953 7.7e-61 M ErfK YbiS YcfS YnhG
PDCMJDCM_01955 2.6e-84 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDCMJDCM_01956 1.2e-180 pbuG S permease
PDCMJDCM_01958 2.3e-78 S Cell surface protein
PDCMJDCM_01960 4.2e-256 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PDCMJDCM_01961 6.3e-61
PDCMJDCM_01962 3.6e-41 rpmE2 J Ribosomal protein L31
PDCMJDCM_01963 5.3e-189 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDCMJDCM_01964 1e-200 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDCMJDCM_01966 1.2e-288 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDCMJDCM_01967 9.9e-42 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDCMJDCM_01968 1.8e-32 ywiB S Domain of unknown function (DUF1934)
PDCMJDCM_01969 4.4e-86 yfeJ 6.3.5.2 F glutamine amidotransferase
PDCMJDCM_01970 3.3e-205 ywfO S HD domain protein
PDCMJDCM_01971 7.5e-88 S hydrolase
PDCMJDCM_01972 2e-105 ydcZ S Putative inner membrane exporter, YdcZ
PDCMJDCM_01973 1.3e-63
PDCMJDCM_01975 1.1e-39 L COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
PDCMJDCM_01976 2.3e-22
PDCMJDCM_01977 3e-56 spoVK O ATPase family associated with various cellular activities (AAA)
PDCMJDCM_01979 2.2e-86 S overlaps another CDS with the same product name
PDCMJDCM_01980 1.6e-125 S overlaps another CDS with the same product name
PDCMJDCM_01981 1.9e-98 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDCMJDCM_01982 1.2e-20 ytkL S Belongs to the UPF0173 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)