ORF_ID e_value Gene_name EC_number CAZy COGs Description
CINDINJP_00001 1.8e-99 M Prophage endopeptidase tail
CINDINJP_00002 3.8e-273 rny D peptidase
CINDINJP_00003 4e-89 S Phage tail protein
CINDINJP_00004 3.8e-106 M Phage tail tape measure protein TP901
CINDINJP_00006 1.6e-24 S Phage tail tube protein
CINDINJP_00008 2.7e-12 S Bacteriophage HK97-gp10, putative tail-component
CINDINJP_00010 7.3e-12 L Phage gp6-like head-tail connector protein
CINDINJP_00011 3.3e-94 S Phage capsid family
CINDINJP_00012 1.2e-71 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
CINDINJP_00013 7.9e-105 S Phage portal protein, HK97 family
CINDINJP_00014 4.4e-218 S Terminase
CINDINJP_00015 5e-33 L Phage terminase, small subunit
CINDINJP_00016 4.9e-22 L HNH nucleases
CINDINJP_00018 9.3e-18
CINDINJP_00027 9.6e-70 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
CINDINJP_00029 1.7e-59 L Belongs to the 'phage' integrase family
CINDINJP_00030 5e-28 S HNH endonuclease
CINDINJP_00031 4.1e-08
CINDINJP_00036 5.5e-158 L Phage plasmid primase, P4 family
CINDINJP_00037 6.8e-176 polB 2.7.7.7 L DNA polymerase elongation subunit (Family B)
CINDINJP_00038 7e-35 S Protein of unknown function (DUF669)
CINDINJP_00039 9.3e-127 L AAA domain
CINDINJP_00040 3.5e-25 L VRR_NUC
CINDINJP_00041 4.1e-18
CINDINJP_00043 8.9e-120 L snf2 family
CINDINJP_00047 5.3e-18 S Domain of unknown function (DUF771)
CINDINJP_00049 8e-36 K Phage regulatory protein
CINDINJP_00050 8.9e-16
CINDINJP_00051 8.8e-26 K Helix-turn-helix XRE-family like proteins
CINDINJP_00052 5.2e-16 E IrrE N-terminal-like domain
CINDINJP_00053 1.4e-12 M Host cell surface-exposed lipoprotein
CINDINJP_00057 4e-09
CINDINJP_00059 4.7e-14
CINDINJP_00060 2.3e-119 L Belongs to the 'phage' integrase family
CINDINJP_00062 5.8e-277 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CINDINJP_00063 2.3e-34 S Repeat protein
CINDINJP_00064 4e-100 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
CINDINJP_00065 1.1e-202 M Exporter of polyketide antibiotics
CINDINJP_00066 3.3e-129 yjjC V ATPases associated with a variety of cellular activities
CINDINJP_00067 2.3e-81 K Bacterial regulatory proteins, tetR family
CINDINJP_00068 5.8e-205 G PTS system Galactitol-specific IIC component
CINDINJP_00069 1e-24 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CINDINJP_00070 7.3e-168 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CINDINJP_00071 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CINDINJP_00072 6.2e-85 dprA LU DNA protecting protein DprA
CINDINJP_00073 4.9e-97 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CINDINJP_00074 4.7e-133 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CINDINJP_00075 3.6e-24 yozE S Belongs to the UPF0346 family
CINDINJP_00076 5.7e-53 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
CINDINJP_00077 7.2e-79 ypmR E GDSL-like Lipase/Acylhydrolase
CINDINJP_00079 1.3e-102 S Aldo keto reductase
CINDINJP_00080 2.4e-35 K helix_turn_helix, mercury resistance
CINDINJP_00081 8.6e-135 yvgN C Aldo keto reductase
CINDINJP_00082 3.2e-57 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CINDINJP_00083 4.4e-156 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CINDINJP_00084 1.4e-275 yfmR S ABC transporter, ATP-binding protein
CINDINJP_00085 6.6e-133 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CINDINJP_00086 4.1e-107 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CINDINJP_00087 1e-106 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
CINDINJP_00088 3.9e-68 xerD L Phage integrase, N-terminal SAM-like domain
CINDINJP_00090 1.8e-56 yqeY S YqeY-like protein
CINDINJP_00091 4.7e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
CINDINJP_00092 8.4e-116 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CINDINJP_00095 1.3e-99 epsJ1 M Glycosyltransferase like family 2
CINDINJP_00096 2.3e-83 M Glycosyltransferase sugar-binding region containing DXD motif
CINDINJP_00097 1.9e-93 M transferase activity, transferring glycosyl groups
CINDINJP_00098 9.6e-126 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
CINDINJP_00099 1.5e-78 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CINDINJP_00100 4.4e-83 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CINDINJP_00101 5.1e-56 dnaD L DnaD domain protein
CINDINJP_00102 1e-235 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
CINDINJP_00103 4e-143 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
CINDINJP_00104 1.4e-36 ypmB S Protein conserved in bacteria
CINDINJP_00105 1.3e-227 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
CINDINJP_00106 8.1e-94 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
CINDINJP_00107 2.8e-118 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
CINDINJP_00108 3e-137 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
CINDINJP_00109 4.6e-114 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CINDINJP_00110 9.3e-104 holA 2.7.7.7 L DNA polymerase III delta subunit
CINDINJP_00111 1.4e-155 comEC S Competence protein ComEC
CINDINJP_00112 2e-69 comEB 3.5.4.12 F ComE operon protein 2
CINDINJP_00113 1.4e-50 comEA L Competence protein ComEA
CINDINJP_00114 5.8e-268 argS 6.1.1.19 J Arginyl-tRNA synthetase
CINDINJP_00115 6.2e-59 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CINDINJP_00116 2.2e-20
CINDINJP_00118 3.9e-122 K LysR substrate binding domain
CINDINJP_00119 2.2e-194 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CINDINJP_00120 1.5e-93 S Acyltransferase family
CINDINJP_00121 1e-152 purD 6.3.4.13 F Belongs to the GARS family
CINDINJP_00122 8.5e-234 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
CINDINJP_00123 2e-74 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CINDINJP_00124 2.4e-139 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
CINDINJP_00125 2.1e-226 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CINDINJP_00126 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CINDINJP_00127 6.8e-103 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CINDINJP_00128 2.2e-30 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CINDINJP_00129 2.2e-96 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
CINDINJP_00130 2.4e-131 ylbL T Belongs to the peptidase S16 family
CINDINJP_00131 4e-49 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CINDINJP_00132 7.2e-74 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
CINDINJP_00133 1.1e-17 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
CINDINJP_00134 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CINDINJP_00135 1.6e-102 ftsW D Belongs to the SEDS family
CINDINJP_00136 3.3e-148 manN G system, mannose fructose sorbose family IID component
CINDINJP_00137 7e-115 manY G PTS system
CINDINJP_00138 6e-148 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
CINDINJP_00139 0.0 typA T GTP-binding protein TypA
CINDINJP_00140 4.8e-76 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
CINDINJP_00141 1.7e-23 yktA S Belongs to the UPF0223 family
CINDINJP_00142 3.7e-32 1.1.1.27 C L-malate dehydrogenase activity
CINDINJP_00143 2.2e-86 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CINDINJP_00144 1.6e-24
CINDINJP_00145 5e-23 ykzG S Belongs to the UPF0356 family
CINDINJP_00146 1.5e-300 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CINDINJP_00147 2.3e-249 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CINDINJP_00148 1e-197 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CINDINJP_00149 6e-196 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CINDINJP_00150 1.4e-215 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CINDINJP_00151 6.1e-19 S Tetratricopeptide repeat
CINDINJP_00152 3.8e-267 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CINDINJP_00153 5.3e-116 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CINDINJP_00154 5.6e-40 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CINDINJP_00155 1.8e-32 rpsT J Binds directly to 16S ribosomal RNA
CINDINJP_00156 3e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CINDINJP_00157 7e-198 yfnA E amino acid
CINDINJP_00158 5.7e-61 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
CINDINJP_00159 7.3e-114 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
CINDINJP_00160 1.9e-57 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CINDINJP_00161 1.1e-26 ylqC S Belongs to the UPF0109 family
CINDINJP_00162 3.6e-42 rpsP J Belongs to the bacterial ribosomal protein bS16 family
CINDINJP_00163 5e-204 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CINDINJP_00164 7e-40 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CINDINJP_00165 9.1e-149 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CINDINJP_00166 1.4e-210 smc D Required for chromosome condensation and partitioning
CINDINJP_00167 1.1e-100 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CINDINJP_00168 7e-26 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
CINDINJP_00169 1.6e-140 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CINDINJP_00170 3.3e-246 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CINDINJP_00171 2.8e-238 yloV S DAK2 domain fusion protein YloV
CINDINJP_00172 4.5e-53 asp S Asp23 family, cell envelope-related function
CINDINJP_00173 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
CINDINJP_00174 3.8e-58 thiN 2.7.6.2 H thiamine pyrophosphokinase
CINDINJP_00175 1.8e-111 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CINDINJP_00176 3.4e-191 KLT serine threonine protein kinase
CINDINJP_00177 3.3e-90 stp 3.1.3.16 T phosphatase
CINDINJP_00178 2.2e-153 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CINDINJP_00179 5.8e-140 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CINDINJP_00180 2.4e-288 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CINDINJP_00181 4.4e-121 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CINDINJP_00182 2.5e-21 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CINDINJP_00183 1.1e-102 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
CINDINJP_00184 5.6e-94 2.7.1.89 M Phosphotransferase enzyme family
CINDINJP_00185 3.5e-26 arsC 1.20.4.1 P Belongs to the ArsC family
CINDINJP_00186 6.1e-187 rodA D Belongs to the SEDS family
CINDINJP_00187 1.8e-12 S Protein of unknown function (DUF2969)
CINDINJP_00188 1.2e-26 yidD S Could be involved in insertion of integral membrane proteins into the membrane
CINDINJP_00189 3.4e-167 mbl D Cell shape determining protein MreB Mrl
CINDINJP_00190 1.7e-58 S Domain of Unknown Function with PDB structure (DUF3862)
CINDINJP_00194 3.4e-113 S N-acetylmuramoyl-L-alanine amidase activity
CINDINJP_00195 1.7e-20 S Bacteriophage holin of superfamily 6 (Holin_LLH)
CINDINJP_00200 5.1e-25 S Calcineurin-like phosphoesterase
CINDINJP_00202 8.5e-222 M Prophage endopeptidase tail
CINDINJP_00203 5.3e-88 S phage tail
CINDINJP_00204 5.3e-113 Z012_10445 D Phage tail tape measure protein
CINDINJP_00205 9.8e-31
CINDINJP_00206 1.4e-24 S Phage tail assembly chaperone protein, TAC
CINDINJP_00207 1.4e-61 S Phage major tail protein 2
CINDINJP_00208 1.9e-25 S Protein of unknown function (DUF3168)
CINDINJP_00209 4.6e-18 S exonuclease activity
CINDINJP_00210 9e-18
CINDINJP_00211 4.2e-27 S Phage gp6-like head-tail connector protein
CINDINJP_00212 2.9e-80
CINDINJP_00213 5.3e-22 S aminoacyl-tRNA ligase activity
CINDINJP_00215 5.2e-75 S Phage Mu protein F like protein
CINDINJP_00216 4.2e-121 S Phage portal protein
CINDINJP_00217 3.4e-29 ps334 S Terminase-like family
CINDINJP_00218 1.6e-26 V NUMOD4 motif
CINDINJP_00219 4.5e-113 ps334 S Terminase-like family
CINDINJP_00220 8.9e-44 L transposase activity
CINDINJP_00221 1.1e-64 S D12 class N6 adenine-specific DNA methyltransferase
CINDINJP_00222 7.2e-44 gepA S Protein of unknown function (DUF4065)
CINDINJP_00224 2e-31 arpU S Phage transcriptional regulator, ArpU family
CINDINJP_00235 3.5e-76 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
CINDINJP_00236 4.3e-15 2.1.1.72 L DNA modification methylase DNA replication, recombination, and repair
CINDINJP_00237 3e-35 rusA L Endodeoxyribonuclease RusA
CINDINJP_00241 1.8e-28 dnaC L IstB-like ATP binding protein
CINDINJP_00242 1.2e-26 L Psort location Cytoplasmic, score
CINDINJP_00243 1.3e-08 V endonuclease activity
CINDINJP_00245 2.1e-64 S Putative HNHc nuclease
CINDINJP_00246 1.2e-38 S ERF superfamily
CINDINJP_00247 1.4e-07 S Bacteriophage Mu Gam like protein
CINDINJP_00250 9.4e-42 S ORF6C domain
CINDINJP_00251 2.2e-18
CINDINJP_00253 6.2e-28 S sequence-specific DNA binding
CINDINJP_00254 1.6e-15 S Pfam:Peptidase_M78
CINDINJP_00255 5.4e-92 sip L Phage integrase, N-terminal SAM-like domain
CINDINJP_00256 9.3e-197 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CINDINJP_00257 4.1e-15 ywzB S Protein of unknown function (DUF1146)
CINDINJP_00258 3.9e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
CINDINJP_00259 1.7e-236 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CINDINJP_00260 1.3e-141 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CINDINJP_00261 6.3e-266 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CINDINJP_00262 2.7e-57 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CINDINJP_00263 2.4e-39 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CINDINJP_00264 1.8e-15 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CINDINJP_00265 4.5e-97 atpB C it plays a direct role in the translocation of protons across the membrane
CINDINJP_00266 5e-100 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CINDINJP_00267 7.7e-135 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CINDINJP_00268 1.4e-89 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CINDINJP_00269 2.3e-177 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CINDINJP_00270 6.8e-86 tdk 2.7.1.21 F thymidine kinase
CINDINJP_00271 4.7e-220 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
CINDINJP_00272 3.5e-110 cobQ S glutamine amidotransferase
CINDINJP_00273 2e-111 ampC V Beta-lactamase
CINDINJP_00274 1.5e-31
CINDINJP_00275 2.6e-119 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CINDINJP_00276 9.2e-206 glnP P ABC transporter
CINDINJP_00278 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CINDINJP_00279 1.2e-160 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CINDINJP_00280 1.5e-274 dnaK O Heat shock 70 kDa protein
CINDINJP_00281 4.2e-56 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CINDINJP_00282 1.4e-131 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CINDINJP_00283 2.5e-95 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
CINDINJP_00284 1.4e-119 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CINDINJP_00285 1.3e-55 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CINDINJP_00286 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CINDINJP_00287 6.9e-26 ylxQ J ribosomal protein
CINDINJP_00288 1.4e-39 ylxR K Protein of unknown function (DUF448)
CINDINJP_00289 4.8e-170 nusA K Participates in both transcription termination and antitermination
CINDINJP_00290 2.7e-66 rimP J Required for maturation of 30S ribosomal subunits
CINDINJP_00291 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CINDINJP_00292 4.5e-260 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CINDINJP_00293 4.1e-157 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
CINDINJP_00294 5.1e-102 cdsA 2.7.7.41 S Belongs to the CDS family
CINDINJP_00295 3.8e-105 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CINDINJP_00296 7.2e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CINDINJP_00297 6.3e-115 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
CINDINJP_00298 2.7e-48 S Domain of unknown function (DUF956)
CINDINJP_00299 5.8e-37 ogt 2.1.1.63 H Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CINDINJP_00301 2e-247 glnA 6.3.1.2 E glutamine synthetase
CINDINJP_00302 1.3e-45 glnR K Transcriptional regulator
CINDINJP_00303 1.8e-205 ynbB 4.4.1.1 P aluminum resistance
CINDINJP_00304 1.9e-111 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CINDINJP_00305 9.7e-17 WQ51_02665 S Protein of unknown function (DUF3042)
CINDINJP_00306 2.7e-46 yqhL P Rhodanese-like protein
CINDINJP_00307 4.7e-158 glk 2.7.1.2 G Glucokinase
CINDINJP_00308 1.5e-25 yqgQ S Bacterial protein of unknown function (DUF910)
CINDINJP_00309 7.4e-70 gluP 3.4.21.105 S Peptidase, S54 family
CINDINJP_00310 1.6e-38 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CINDINJP_00311 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
CINDINJP_00312 3e-19 D nuclear chromosome segregation
CINDINJP_00313 1.2e-74 yciQ P membrane protein (DUF2207)
CINDINJP_00314 5.4e-44 MA20_27270 S mazG nucleotide pyrophosphohydrolase
CINDINJP_00315 6.8e-91 engB D Necessary for normal cell division and for the maintenance of normal septation
CINDINJP_00316 5.9e-27 yneF S UPF0154 protein
CINDINJP_00317 2.2e-30 ynzC S UPF0291 protein
CINDINJP_00318 7.2e-83 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CINDINJP_00319 6.9e-70 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CINDINJP_00320 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CINDINJP_00321 2.8e-19 secG U Preprotein translocase
CINDINJP_00322 1.2e-179 clcA P chloride
CINDINJP_00323 6.7e-146 lmrP E Major Facilitator Superfamily
CINDINJP_00324 1.8e-169 T PhoQ Sensor
CINDINJP_00325 5e-104 K response regulator
CINDINJP_00326 2.2e-132 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CINDINJP_00327 9.5e-234 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CINDINJP_00328 2.3e-128 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CINDINJP_00329 1.3e-208 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
CINDINJP_00330 6.1e-180 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CINDINJP_00331 1.1e-136 cggR K Putative sugar-binding domain
CINDINJP_00333 1.1e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CINDINJP_00334 1.8e-149 whiA K May be required for sporulation
CINDINJP_00335 8.2e-153 ybhK S Required for morphogenesis under gluconeogenic growth conditions
CINDINJP_00336 7.5e-126 rapZ S Displays ATPase and GTPase activities
CINDINJP_00337 5e-79 ylbE GM NAD dependent epimerase dehydratase family protein
CINDINJP_00338 1.1e-83 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CINDINJP_00339 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CINDINJP_00340 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CINDINJP_00341 6.1e-273 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CINDINJP_00342 1.1e-112 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CINDINJP_00343 8.7e-133 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CINDINJP_00344 1.6e-26 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
CINDINJP_00345 2.4e-08 pspC KT PspC domain
CINDINJP_00346 1.2e-85 phoR 2.7.13.3 T Histidine kinase
CINDINJP_00347 6e-86 K response regulator
CINDINJP_00348 9.1e-68 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
CINDINJP_00349 2.2e-164 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CINDINJP_00350 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CINDINJP_00351 7e-95 yeaN P Major Facilitator Superfamily
CINDINJP_00352 6e-81 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CINDINJP_00353 5.6e-44 comFC S Competence protein
CINDINJP_00354 3.2e-128 comFA L Helicase C-terminal domain protein
CINDINJP_00355 1.6e-157 tagO 2.7.8.33, 2.7.8.35 M transferase
CINDINJP_00356 1.2e-295 ydaO E amino acid
CINDINJP_00357 2.5e-269 aha1 P COG COG0474 Cation transport ATPase
CINDINJP_00358 1.3e-272 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CINDINJP_00359 2.4e-33 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CINDINJP_00360 1.4e-33 S CAAX protease self-immunity
CINDINJP_00361 2.8e-98 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CINDINJP_00362 6.9e-257 uup S ABC transporter, ATP-binding protein
CINDINJP_00363 8.4e-161 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CINDINJP_00364 4.3e-28 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
CINDINJP_00365 3.7e-70 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
CINDINJP_00366 1e-139 ansA 3.5.1.1 EJ Asparaginase
CINDINJP_00367 4.7e-81 fat 3.1.2.21 I Acyl-ACP thioesterase
CINDINJP_00368 4.1e-92 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CINDINJP_00369 1.4e-40 yabA L Involved in initiation control of chromosome replication
CINDINJP_00370 3.9e-83 holB 2.7.7.7 L DNA polymerase III
CINDINJP_00371 1.4e-65 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CINDINJP_00372 9.2e-29 yaaL S Protein of unknown function (DUF2508)
CINDINJP_00373 2.2e-97 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CINDINJP_00374 7e-34 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CINDINJP_00375 4.3e-210 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CINDINJP_00376 3.3e-62 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CINDINJP_00377 1.1e-75 rsmC 2.1.1.172 J Methyltransferase
CINDINJP_00378 1.2e-27 nrdH O Glutaredoxin
CINDINJP_00379 4.8e-45 nrdI F NrdI Flavodoxin like
CINDINJP_00380 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CINDINJP_00381 1e-160 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CINDINJP_00382 1.6e-301 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CINDINJP_00383 1.4e-54
CINDINJP_00384 2.6e-48 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CINDINJP_00385 7.6e-75 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CINDINJP_00386 1.6e-115 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CINDINJP_00387 5e-67 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CINDINJP_00388 7.7e-84 nusG K Participates in transcription elongation, termination and antitermination
CINDINJP_00389 2.6e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CINDINJP_00390 2.1e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
CINDINJP_00391 5.4e-71 yacP S YacP-like NYN domain
CINDINJP_00392 3.2e-109 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CINDINJP_00393 6.4e-56 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CINDINJP_00394 1.8e-206 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
CINDINJP_00395 2.9e-247 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CINDINJP_00396 8.2e-154 yacL S domain protein
CINDINJP_00397 5.4e-224 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CINDINJP_00398 4e-74 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
CINDINJP_00399 4.3e-19 HA62_12640 S GCN5-related N-acetyl-transferase
CINDINJP_00400 7.6e-223 pepC 3.4.22.40 E Peptidase C1-like family
CINDINJP_00401 1.5e-29 S Enterocin A Immunity
CINDINJP_00402 4.9e-85 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CINDINJP_00403 5.9e-129 mleP2 S Sodium Bile acid symporter family
CINDINJP_00404 1.3e-115 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CINDINJP_00406 7.2e-45 ydcK S Belongs to the SprT family
CINDINJP_00407 3.1e-250 yhgF K Tex-like protein N-terminal domain protein
CINDINJP_00408 3.6e-130 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CINDINJP_00409 3.3e-243 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CINDINJP_00410 2.5e-90 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CINDINJP_00411 4.9e-96 gntR1 K UbiC transcription regulator-associated domain protein
CINDINJP_00412 5.9e-90 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CINDINJP_00414 1.1e-07
CINDINJP_00415 1.6e-197 dtpT U amino acid peptide transporter
CINDINJP_00419 4.7e-07
CINDINJP_00420 3.9e-263 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
CINDINJP_00421 1.7e-54 rplI J Binds to the 23S rRNA
CINDINJP_00422 1.3e-204 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
CINDINJP_00423 5.3e-64 C FMN binding
CINDINJP_00424 1.6e-230 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CINDINJP_00426 8.7e-157 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CINDINJP_00427 3.5e-59 ykhA 3.1.2.20 I Thioesterase superfamily
CINDINJP_00428 5.6e-10 S CAAX protease self-immunity
CINDINJP_00429 2.8e-81 S Belongs to the UPF0246 family
CINDINJP_00430 1.6e-100 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
CINDINJP_00431 9.3e-129 yxjG 2.1.1.14 E Cobalamin-independent synthase, Catalytic domain
CINDINJP_00432 3.7e-74 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
CINDINJP_00433 4.5e-196 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
CINDINJP_00434 3.8e-161 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
CINDINJP_00435 2.2e-56 3.1.3.48 K Transcriptional regulator
CINDINJP_00436 1.2e-197 1.3.5.4 C FMN_bind
CINDINJP_00437 6.5e-117 pepL 3.4.11.5 E Releases the N-terminal proline from various substrates
CINDINJP_00438 2e-201 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
CINDINJP_00439 2.8e-139 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
CINDINJP_00440 1.9e-80 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
CINDINJP_00441 2e-64 2.7.1.191 G PTS system sorbose subfamily IIB component
CINDINJP_00442 4.4e-101 G PTS system sorbose-specific iic component
CINDINJP_00443 2.4e-123 G PTS system mannose/fructose/sorbose family IID component
CINDINJP_00444 2e-39 2.7.1.191 G PTS system fructose IIA component
CINDINJP_00445 5.5e-231 malL 3.2.1.10 GH13 G Psort location Cytoplasmic, score
CINDINJP_00446 3.1e-112 lacI3 K helix_turn _helix lactose operon repressor
CINDINJP_00447 2.8e-135 glpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
CINDINJP_00448 1.2e-63 hchA S intracellular protease amidase
CINDINJP_00449 1.2e-21 K transcriptional regulator
CINDINJP_00450 5.6e-150 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
CINDINJP_00451 1.5e-43 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
CINDINJP_00452 3.3e-21 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
CINDINJP_00453 4.2e-251 ctpA 3.6.3.54 P P-type ATPase
CINDINJP_00454 5e-66 pgm3 G phosphoglycerate mutase family
CINDINJP_00455 8.2e-55 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
CINDINJP_00456 1.1e-85 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CINDINJP_00457 9.1e-219 yifK E Amino acid permease
CINDINJP_00458 1.4e-202 oppA E ABC transporter, substratebinding protein
CINDINJP_00459 1e-141 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
CINDINJP_00460 5.8e-170 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
CINDINJP_00461 1.3e-180 oppD P Belongs to the ABC transporter superfamily
CINDINJP_00462 3.7e-155 oppF P Belongs to the ABC transporter superfamily
CINDINJP_00463 1.2e-15 psiE S Phosphate-starvation-inducible E
CINDINJP_00464 2.2e-209 mmuP E amino acid
CINDINJP_00465 7.6e-113 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
CINDINJP_00466 4.5e-39 K LytTr DNA-binding domain
CINDINJP_00467 2.5e-16 S Protein of unknown function (DUF3021)
CINDINJP_00468 1.2e-150 yfeX P Peroxidase
CINDINJP_00469 1.8e-30 tetR K Transcriptional regulator C-terminal region
CINDINJP_00470 3.1e-47 S Short repeat of unknown function (DUF308)
CINDINJP_00471 6.2e-53 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CINDINJP_00472 4.8e-163 oxlT P Major Facilitator Superfamily
CINDINJP_00473 2e-67 ybbL S ABC transporter
CINDINJP_00474 1.9e-101 ybbM S Uncharacterised protein family (UPF0014)
CINDINJP_00475 4.2e-43 ytcD K HxlR-like helix-turn-helix
CINDINJP_00476 6.9e-121 ytbE S reductase
CINDINJP_00477 7.5e-72 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CINDINJP_00479 6.4e-96 XK27_06785 V ABC transporter, ATP-binding protein
CINDINJP_00480 1.2e-253 XK27_06780 V ABC transporter permease
CINDINJP_00482 5.1e-42 wecD K Acetyltransferase GNAT Family
CINDINJP_00483 3.9e-47 hmpT S ECF-type riboflavin transporter, S component
CINDINJP_00484 2.1e-69 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
CINDINJP_00485 3.2e-08 yvaZ S Protein of unknown function (DUF1648)
CINDINJP_00486 1.7e-111 dat 2.6.1.21 EH PFAM aminotransferase, class IV
CINDINJP_00487 7.6e-285 pepO 3.4.24.71 O Peptidase family M13
CINDINJP_00488 2.9e-43 thiT S Thiamine transporter protein (Thia_YuaJ)
CINDINJP_00489 6.9e-54 K Transcriptional regulator C-terminal region
CINDINJP_00491 4.2e-16
CINDINJP_00493 4.7e-131 S D5 N terminal like
CINDINJP_00494 6.7e-46 L DNA replication protein
CINDINJP_00501 6.1e-20 K Transcriptional regulator
CINDINJP_00503 1.1e-12 K Transcriptional regulator
CINDINJP_00504 7.4e-126 sip L Belongs to the 'phage' integrase family
CINDINJP_00505 1.6e-55 jag S R3H domain protein
CINDINJP_00506 1.5e-56 ohrR K helix_turn_helix multiple antibiotic resistance protein
CINDINJP_00507 2e-31 azlD S Branched-chain amino acid transport protein (AzlD)
CINDINJP_00508 4.2e-208 G glycerol-3-phosphate transporter
CINDINJP_00509 1.7e-46 3.6.4.12 S PD-(D/E)XK nuclease family transposase
CINDINJP_00511 1.3e-75 GM Belongs to the short-chain dehydrogenases reductases (SDR) family
CINDINJP_00512 3.3e-25 K MarR family transcriptional regulator
CINDINJP_00513 4.4e-40 1.6.5.2 GM NAD(P)H-binding
CINDINJP_00514 1.5e-72 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CINDINJP_00515 3.7e-145 htrA 3.4.21.107 O serine protease
CINDINJP_00516 1.3e-116 vicX 3.1.26.11 S domain protein
CINDINJP_00517 1.8e-30 yyaQ S YjbR
CINDINJP_00518 5.6e-80 yycI S YycH protein
CINDINJP_00519 4.6e-103 yycH S YycH protein
CINDINJP_00520 1.1e-272 vicK 2.7.13.3 T Histidine kinase
CINDINJP_00521 9e-114 K response regulator
CINDINJP_00522 6.3e-85 yxeH S hydrolase
CINDINJP_00524 3.3e-96 S Domain of unknown function DUF87
CINDINJP_00526 1.1e-229 V ABC transporter transmembrane region
CINDINJP_00527 4e-216 XK27_09600 V ABC transporter, ATP-binding protein
CINDINJP_00528 1.2e-31 K Transcriptional regulator, MarR family
CINDINJP_00529 2.9e-172 S Putative peptidoglycan binding domain
CINDINJP_00531 4e-23 relB L RelB antitoxin
CINDINJP_00532 8.4e-62 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
CINDINJP_00533 1.1e-139 gldA 1.1.1.6 C Iron-containing alcohol dehydrogenase
CINDINJP_00534 2.2e-178 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
CINDINJP_00535 5.6e-108 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
CINDINJP_00536 7.9e-223 pepF E Oligopeptidase F
CINDINJP_00537 2.2e-96 yicL EG EamA-like transporter family
CINDINJP_00538 2.4e-69 2.3.1.178 J Acetyltransferase (GNAT) domain
CINDINJP_00539 4.4e-170 yjjP S Putative threonine/serine exporter
CINDINJP_00540 2.8e-109 glcU U sugar transport
CINDINJP_00541 3.8e-14 yobS K transcriptional regulator
CINDINJP_00542 3.8e-152 mdtG EGP Major facilitator Superfamily
CINDINJP_00543 4.1e-106 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
CINDINJP_00544 2.2e-224 yxbA 6.3.1.12 S ATP-grasp enzyme
CINDINJP_00545 1.5e-230 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CINDINJP_00546 3.6e-17 yneR
CINDINJP_00547 7.4e-248 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
CINDINJP_00548 1.6e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CINDINJP_00549 3.3e-12 yiiE S Protein of unknown function (DUF1211)
CINDINJP_00550 3.7e-37 yiiE S Protein of unknown function (DUF1211)
CINDINJP_00551 0.0 asnB 6.3.5.4 E Asparagine synthase
CINDINJP_00552 7.4e-64 D peptidase
CINDINJP_00553 7.3e-117 S Glycosyl transferase family 2
CINDINJP_00554 2.5e-110 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
CINDINJP_00555 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CINDINJP_00556 3.3e-63 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CINDINJP_00557 4.8e-45 rpsF J Binds together with S18 to 16S ribosomal RNA
CINDINJP_00558 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CINDINJP_00559 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CINDINJP_00560 9.3e-153 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CINDINJP_00561 9e-20 yaaA S S4 domain protein YaaA
CINDINJP_00562 3.9e-159 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CINDINJP_00563 2.1e-204 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CINDINJP_00564 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
CINDINJP_00565 2.2e-49 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CINDINJP_00566 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CINDINJP_00567 1.1e-199 nupG F Nucleoside
CINDINJP_00568 2e-122 MA20_14895 S Conserved hypothetical protein 698
CINDINJP_00569 2.9e-53 K LysR substrate binding domain
CINDINJP_00570 9.6e-09
CINDINJP_00571 2.3e-65 yxkH G Polysaccharide deacetylase
CINDINJP_00572 2.6e-29 yqkB S Belongs to the HesB IscA family
CINDINJP_00573 1.4e-97 ydcZ S Putative inner membrane exporter, YdcZ
CINDINJP_00574 7.5e-88 S hydrolase
CINDINJP_00575 3.6e-204 ywfO S HD domain protein
CINDINJP_00576 2e-86 yfeJ 6.3.5.2 F glutamine amidotransferase
CINDINJP_00577 1.8e-32 ywiB S Domain of unknown function (DUF1934)
CINDINJP_00578 1e-41 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CINDINJP_00579 1.2e-288 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CINDINJP_00581 1e-200 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CINDINJP_00582 5.3e-189 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CINDINJP_00583 3.6e-41 rpmE2 J Ribosomal protein L31
CINDINJP_00584 6.3e-61
CINDINJP_00585 4.9e-122 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
CINDINJP_00586 4.5e-124 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
CINDINJP_00588 1.8e-78 S Cell surface protein
CINDINJP_00590 1.2e-180 pbuG S permease
CINDINJP_00591 2.6e-84 dacA 3.4.16.4 M Belongs to the peptidase S11 family
CINDINJP_00593 7.7e-61 M ErfK YbiS YcfS YnhG
CINDINJP_00594 4.9e-65 S Uncharacterized protein conserved in bacteria (DUF2263)
CINDINJP_00595 4.1e-179 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CINDINJP_00596 3.4e-208 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CINDINJP_00597 1.6e-30 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CINDINJP_00598 4.8e-146 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CINDINJP_00599 5.4e-13
CINDINJP_00600 3.4e-48 ndoA L Toxic component of a toxin-antitoxin (TA) module
CINDINJP_00601 1.5e-91 yunF F Protein of unknown function DUF72
CINDINJP_00602 6.6e-156 nrnB S DHHA1 domain
CINDINJP_00603 1.3e-43 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
CINDINJP_00604 7.6e-60
CINDINJP_00605 2.3e-48 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain (presumed)
CINDINJP_00606 7e-23 S Cytochrome B5
CINDINJP_00607 1.1e-19 yvrI K RNA polymerase sigma factor, sigma-70 family
CINDINJP_00608 2.9e-68 recX 2.4.1.337 GT4 S Regulatory protein RecX
CINDINJP_00609 9.4e-192 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CINDINJP_00610 2.6e-97 ygaC J Belongs to the UPF0374 family
CINDINJP_00611 3.4e-91 yueF S AI-2E family transporter
CINDINJP_00612 6.5e-158 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
CINDINJP_00613 1.4e-108 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
CINDINJP_00614 5.2e-279 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CINDINJP_00615 0.0 lacL 3.2.1.23 G -beta-galactosidase
CINDINJP_00616 4e-289 lacS G Transporter
CINDINJP_00617 5.9e-111 galR K Transcriptional regulator
CINDINJP_00618 2.6e-179 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CINDINJP_00619 2.3e-163 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
CINDINJP_00620 1.6e-200 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
CINDINJP_00621 0.0 rafA 3.2.1.22 G alpha-galactosidase
CINDINJP_00622 2.9e-105 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
CINDINJP_00623 6.6e-23 XK27_09445 S Domain of unknown function (DUF1827)
CINDINJP_00624 0.0 clpE O Belongs to the ClpA ClpB family
CINDINJP_00625 1.5e-15
CINDINJP_00626 9.7e-37 ptsH G phosphocarrier protein HPR
CINDINJP_00627 2.4e-285 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CINDINJP_00628 3.3e-161 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
CINDINJP_00629 5.4e-128 cpoA GT4 M Glycosyltransferase, group 1 family protein
CINDINJP_00630 1.7e-129 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CINDINJP_00631 6.8e-26 ykuJ S Protein of unknown function (DUF1797)
CINDINJP_00632 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CINDINJP_00633 6.1e-177 recN L May be involved in recombinational repair of damaged DNA
CINDINJP_00634 6.6e-49 argR K Regulates arginine biosynthesis genes
CINDINJP_00635 1.2e-120 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
CINDINJP_00636 4.7e-83 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
CINDINJP_00637 1.2e-16 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CINDINJP_00638 1.2e-146 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CINDINJP_00639 1.7e-103 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CINDINJP_00640 1.9e-36 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CINDINJP_00641 3.7e-46 yqhY S Asp23 family, cell envelope-related function
CINDINJP_00642 2.1e-94 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CINDINJP_00643 1.3e-41 dut S dUTPase
CINDINJP_00644 7.2e-117
CINDINJP_00645 7.3e-105
CINDINJP_00646 4.3e-137 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
CINDINJP_00647 9.7e-24 acyP 3.6.1.7 C Belongs to the acylphosphatase family
CINDINJP_00648 1.6e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CINDINJP_00649 5e-167 arlS 2.7.13.3 T Histidine kinase
CINDINJP_00650 3.1e-111 K response regulator
CINDINJP_00652 8.6e-107 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CINDINJP_00653 1.2e-225 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CINDINJP_00654 3.8e-159 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CINDINJP_00655 4.1e-57 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CINDINJP_00656 4.6e-29 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
CINDINJP_00657 5.6e-54 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
CINDINJP_00658 6.9e-37
CINDINJP_00659 2.7e-128 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CINDINJP_00660 1.9e-128 rpsB J Belongs to the universal ribosomal protein uS2 family
CINDINJP_00661 1.5e-27 yazA L GIY-YIG catalytic domain protein
CINDINJP_00662 1.1e-93 yabB 2.1.1.223 L Methyltransferase small domain
CINDINJP_00663 1.2e-88 plsC 2.3.1.51 I Acyltransferase
CINDINJP_00664 1.9e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
CINDINJP_00665 2e-57 yceD S Uncharacterized ACR, COG1399
CINDINJP_00666 1.3e-122 ylbM S Belongs to the UPF0348 family
CINDINJP_00667 4.2e-82 H Nodulation protein S (NodS)
CINDINJP_00668 1.5e-48 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CINDINJP_00669 7.2e-72 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
CINDINJP_00670 2.7e-77 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CINDINJP_00671 1e-29 yhbY J RNA-binding protein
CINDINJP_00672 7.9e-181 yqeH S Ribosome biogenesis GTPase YqeH
CINDINJP_00673 2.5e-71 yqeG S HAD phosphatase, family IIIA
CINDINJP_00674 7.7e-53 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CINDINJP_00675 1.4e-24 rpmI J Belongs to the bacterial ribosomal protein bL35 family
CINDINJP_00676 1.3e-79 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CINDINJP_00677 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CINDINJP_00678 2.2e-107 dnaI L Primosomal protein DnaI
CINDINJP_00679 1.6e-79 dnaB L replication initiation and membrane attachment
CINDINJP_00680 6.1e-66 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CINDINJP_00681 2.1e-50 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CINDINJP_00682 3.3e-107 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CINDINJP_00683 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CINDINJP_00684 6.7e-69 ybhL S Belongs to the BI1 family
CINDINJP_00685 2.5e-61 phaJ I N-terminal half of MaoC dehydratase
CINDINJP_00686 3.8e-222 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
CINDINJP_00687 9e-240 sftA D Belongs to the FtsK SpoIIIE SftA family
CINDINJP_00688 6.8e-76 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CINDINJP_00689 4e-45 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
CINDINJP_00690 7.9e-101 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CINDINJP_00691 1.6e-98 ytmP 2.7.1.89 M Choline/ethanolamine kinase
CINDINJP_00692 1.3e-72 ecsB U ABC transporter
CINDINJP_00693 2.8e-94 ecsA V ABC transporter, ATP-binding protein
CINDINJP_00694 5.4e-53 hit FG histidine triad
CINDINJP_00696 6.6e-114 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CINDINJP_00697 5e-128 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
CINDINJP_00698 2e-21 yheA S Belongs to the UPF0342 family
CINDINJP_00699 1e-285 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
CINDINJP_00701 4.9e-93 ykuT M mechanosensitive ion channel
CINDINJP_00702 4.1e-177 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
CINDINJP_00703 1.5e-60 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
CINDINJP_00704 1.5e-45 ykuL S CBS domain
CINDINJP_00705 5.7e-119 gla U Major intrinsic protein
CINDINJP_00706 7.9e-62 yvdD 3.2.2.10 S Possible lysine decarboxylase
CINDINJP_00707 1.8e-72 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
CINDINJP_00709 2.3e-63 srtA 3.4.22.70 M sortase family
CINDINJP_00710 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
CINDINJP_00711 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CINDINJP_00712 1.1e-33
CINDINJP_00713 1.8e-141 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CINDINJP_00714 1e-157 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CINDINJP_00715 1.5e-96 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CINDINJP_00716 6.9e-157 manA 5.3.1.8 G mannose-6-phosphate isomerase
CINDINJP_00717 1.1e-39 ybjQ S Belongs to the UPF0145 family
CINDINJP_00718 2.5e-08
CINDINJP_00719 8e-96 V ABC transporter, ATP-binding protein
CINDINJP_00720 1.1e-41 gntR1 K Transcriptional regulator, GntR family
CINDINJP_00721 6.4e-186 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
CINDINJP_00722 2.8e-65 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CINDINJP_00723 4.2e-261 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
CINDINJP_00724 2.2e-107 terC P Integral membrane protein TerC family
CINDINJP_00725 1.6e-38 K Transcriptional regulator
CINDINJP_00726 1.3e-95 tcyA ET Belongs to the bacterial solute-binding protein 3 family
CINDINJP_00727 4.1e-101 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CINDINJP_00728 1.7e-101 tcyB E ABC transporter
CINDINJP_00730 3.2e-29 ponA V the current gene model (or a revised gene model) may contain a frame shift
CINDINJP_00731 6.1e-188 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CINDINJP_00732 5.9e-303 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CINDINJP_00733 4e-210 mtlR K Mga helix-turn-helix domain
CINDINJP_00734 9.8e-177 yjcE P Sodium proton antiporter
CINDINJP_00735 8.4e-104 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
CINDINJP_00736 4e-49 dhaM 2.7.1.121 S PTS system fructose IIA component
CINDINJP_00737 9.5e-69 dhaL 2.7.1.121 S Dak2
CINDINJP_00738 2.2e-150 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
CINDINJP_00739 1.9e-114 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
CINDINJP_00740 6.5e-61 K Bacterial regulatory proteins, tetR family
CINDINJP_00741 5.9e-210 brnQ U Component of the transport system for branched-chain amino acids
CINDINJP_00743 1.7e-111 endA F DNA RNA non-specific endonuclease
CINDINJP_00744 2.7e-74 XK27_02070 S Nitroreductase family
CINDINJP_00745 1.1e-193 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
CINDINJP_00746 3.8e-33 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
CINDINJP_00747 6.1e-294 lai 4.2.1.53 S Myosin-crossreactive antigen
CINDINJP_00748 9.4e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
CINDINJP_00749 5.5e-59 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
CINDINJP_00750 2.1e-66 azlC E branched-chain amino acid
CINDINJP_00751 7.7e-205 yeeA V Type II restriction enzyme, methylase subunits
CINDINJP_00752 2.4e-257 yeeB L DEAD-like helicases superfamily
CINDINJP_00753 7.4e-92 pstS P T5orf172
CINDINJP_00754 6.9e-15
CINDINJP_00755 4.6e-24
CINDINJP_00758 1.3e-161 potE2 E amino acid
CINDINJP_00759 5.4e-87 ald 1.4.1.1 C Belongs to the AlaDH PNT family
CINDINJP_00760 2.7e-48 ald 1.4.1.1 C Belongs to the AlaDH PNT family
CINDINJP_00761 2.7e-116 queH 1.17.99.6, 3.1.26.4 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CINDINJP_00762 1.9e-57 racA K Domain of unknown function (DUF1836)
CINDINJP_00763 3.5e-80 yitS S EDD domain protein, DegV family
CINDINJP_00764 1.1e-45 yjaB_1 K Acetyltransferase (GNAT) domain
CINDINJP_00765 4.4e-07
CINDINJP_00766 2.4e-286 hsdR 3.1.21.3 L DEAD/DEAH box helicase
CINDINJP_00767 4e-225 hsdM 2.1.1.72 V type I restriction-modification system
CINDINJP_00768 8.6e-90 hsdS 3.1.21.3 L Type I restriction modification DNA specificity domain
CINDINJP_00769 4.1e-67
CINDINJP_00770 7.3e-118 O AAA domain (Cdc48 subfamily)
CINDINJP_00771 1e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CINDINJP_00772 0.0 O Belongs to the peptidase S8 family
CINDINJP_00773 4.7e-26 S protein encoded in hypervariable junctions of pilus gene clusters
CINDINJP_00774 9e-102 qmcA O prohibitin homologues
CINDINJP_00776 4.1e-53 1.14.12.17 C Oxidoreductase NAD-binding domain
CINDINJP_00777 1.2e-57 tlpA2 L Transposase IS200 like
CINDINJP_00778 2e-159 L transposase, IS605 OrfB family
CINDINJP_00779 1.2e-84 dps P Ferritin-like domain
CINDINJP_00780 1.1e-98 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
CINDINJP_00781 5.8e-44 L hmm pf00665
CINDINJP_00782 8.8e-50 yugI 5.3.1.9 J general stress protein
CINDINJP_00783 2.7e-95 trxB2 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
CINDINJP_00784 3e-92 dedA S SNARE associated Golgi protein
CINDINJP_00785 7.8e-32 S Protein of unknown function (DUF1461)
CINDINJP_00786 2.9e-113 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CINDINJP_00787 1.9e-53 yutD S Protein of unknown function (DUF1027)
CINDINJP_00788 3e-57 S Calcineurin-like phosphoesterase
CINDINJP_00789 9.3e-184 cycA E Amino acid permease
CINDINJP_00790 7.6e-98 ytxK 2.1.1.72 L N-6 DNA Methylase
CINDINJP_00792 5.5e-11 S Putative Competence protein ComGF
CINDINJP_00794 1.5e-13
CINDINJP_00795 1.2e-27 comGC U competence protein ComGC
CINDINJP_00796 5.7e-98 comGB NU type II secretion system
CINDINJP_00797 4.7e-121 comGA NU Type II IV secretion system protein
CINDINJP_00798 2.1e-102 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CINDINJP_00799 1.5e-119 yebC K Transcriptional regulatory protein
CINDINJP_00800 3.7e-42 S VanZ like family
CINDINJP_00801 1.3e-158 ccpA K catabolite control protein A
CINDINJP_00802 1e-172 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
CINDINJP_00803 1.5e-13
CINDINJP_00806 4.5e-75 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CINDINJP_00807 7.1e-35 K helix_turn_helix, Arsenical Resistance Operon Repressor
CINDINJP_00808 5.2e-65 hly S protein, hemolysin III
CINDINJP_00809 7.3e-41 M1-874 K Domain of unknown function (DUF1836)
CINDINJP_00810 9.4e-84 S membrane
CINDINJP_00811 1.1e-79 S VIT family
CINDINJP_00812 1.8e-148 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
CINDINJP_00813 7.9e-56 P Plays a role in the regulation of phosphate uptake
CINDINJP_00814 1.8e-115 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CINDINJP_00815 2.7e-114 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CINDINJP_00816 3e-122 pstA P Phosphate transport system permease protein PstA
CINDINJP_00817 4.1e-119 pstC P probably responsible for the translocation of the substrate across the membrane
CINDINJP_00818 3.2e-97 pstS P Phosphate
CINDINJP_00819 1.3e-41 yjbH Q Thioredoxin
CINDINJP_00820 1.5e-232 pepF E oligoendopeptidase F
CINDINJP_00821 1.1e-68 coiA 3.6.4.12 S Competence protein
CINDINJP_00822 2.1e-47 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CINDINJP_00823 1.4e-218 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
CINDINJP_00831 1.5e-19 S Bacteriophage holin of superfamily 6 (Holin_LLH)
CINDINJP_00832 1.5e-111 S N-acetylmuramoyl-L-alanine amidase activity
CINDINJP_00833 2.2e-201 argH 4.3.2.1 E argininosuccinate lyase
CINDINJP_00834 1.9e-196 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
CINDINJP_00835 6.2e-152 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
CINDINJP_00836 2.2e-126 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CINDINJP_00837 2.5e-104 pfoS S Phosphotransferase system, EIIC
CINDINJP_00838 3.9e-185 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CINDINJP_00839 6.6e-53 adhR K helix_turn_helix, mercury resistance
CINDINJP_00840 5.2e-137 purR 2.4.2.7 F pur operon repressor
CINDINJP_00841 2.1e-46 EGP Transmembrane secretion effector
CINDINJP_00842 1.1e-192 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CINDINJP_00843 2.3e-168 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CINDINJP_00844 7.7e-19 rimL 1.1.1.25 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CINDINJP_00845 7.6e-112 dkg S reductase
CINDINJP_00846 1.1e-23
CINDINJP_00847 1e-78 2.4.2.3 F Phosphorylase superfamily
CINDINJP_00848 2e-289 ybiT S ABC transporter, ATP-binding protein
CINDINJP_00849 1.1e-62 bCE_4747 S Beta-lactamase superfamily domain
CINDINJP_00850 1.9e-98 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
CINDINJP_00851 1.6e-125 S overlaps another CDS with the same product name
CINDINJP_00852 2.2e-86 S overlaps another CDS with the same product name
CINDINJP_00854 3e-56 spoVK O ATPase family associated with various cellular activities (AAA)
CINDINJP_00855 3e-22
CINDINJP_00856 1.1e-39 L COGs COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
CINDINJP_00860 2.1e-07
CINDINJP_00870 7.4e-177 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CINDINJP_00871 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
CINDINJP_00872 9.7e-194 cycA E Amino acid permease
CINDINJP_00873 8.3e-187 ytgP S Polysaccharide biosynthesis protein
CINDINJP_00874 1.1e-61 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CINDINJP_00875 1.2e-80 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CINDINJP_00876 5.1e-193 pepV 3.5.1.18 E dipeptidase PepV
CINDINJP_00877 3.3e-182 S Protein of unknown function DUF262
CINDINJP_00879 3e-36
CINDINJP_00880 1.3e-65 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
CINDINJP_00881 4.2e-61 marR K Transcriptional regulator, MarR family
CINDINJP_00882 6.4e-102 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CINDINJP_00883 2.2e-27 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
CINDINJP_00884 1.5e-103 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
CINDINJP_00885 1.4e-98 IQ reductase
CINDINJP_00886 1.8e-194 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
CINDINJP_00887 7.9e-47 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
CINDINJP_00888 1.9e-63 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
CINDINJP_00889 9.3e-216 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
CINDINJP_00890 2.7e-125 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CINDINJP_00891 2.3e-102 accA 2.1.3.15, 6.4.1.2 I alpha subunit
CINDINJP_00892 5.5e-109 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
CINDINJP_00893 1.5e-230 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CINDINJP_00894 3.1e-240 pgi 5.3.1.9 G Belongs to the GPI family
CINDINJP_00895 1.6e-302 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CINDINJP_00896 5e-83 3.1.21.3 V Type I restriction modification DNA specificity domain
CINDINJP_00897 7.5e-201 hsdM 2.1.1.72 V type I restriction-modification system
CINDINJP_00898 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
CINDINJP_00900 4.9e-22 XK27_07525 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
CINDINJP_00901 2.8e-56 3.6.1.27 I Acid phosphatase homologues
CINDINJP_00902 2.3e-68 maa 2.3.1.79 S Maltose acetyltransferase
CINDINJP_00903 4.4e-74 2.3.1.178 M GNAT acetyltransferase
CINDINJP_00905 7.9e-196 ade 3.5.4.2 F Adenine deaminase C-terminal domain
CINDINJP_00906 1e-64 ypsA S Belongs to the UPF0398 family
CINDINJP_00907 4.4e-189 nhaC C Na H antiporter NhaC
CINDINJP_00908 3e-76 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CINDINJP_00909 1.1e-293 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
CINDINJP_00910 7.3e-113 xerD D recombinase XerD
CINDINJP_00911 4.8e-125 cvfB S S1 domain
CINDINJP_00912 1.3e-42 yeaL S Protein of unknown function (DUF441)
CINDINJP_00913 4.5e-58 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CINDINJP_00914 5.8e-100 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CINDINJP_00915 1.1e-56 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CINDINJP_00916 4.5e-58 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CINDINJP_00917 4.6e-37 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CINDINJP_00918 7.8e-218 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CINDINJP_00919 7e-79 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CINDINJP_00920 6e-123 xerC D Belongs to the 'phage' integrase family. XerC subfamily
CINDINJP_00921 1.3e-178 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
CINDINJP_00922 1.2e-100 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
CINDINJP_00923 9.7e-73
CINDINJP_00926 4.7e-09 M LysM domain
CINDINJP_00927 1.6e-42 rpmA J Belongs to the bacterial ribosomal protein bL27 family
CINDINJP_00928 1e-27 ysxB J Cysteine protease Prp
CINDINJP_00929 8.3e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
CINDINJP_00932 2.2e-08 S Protein of unknown function (DUF2922)
CINDINJP_00934 1.3e-16 K DNA-templated transcription, initiation
CINDINJP_00936 1.2e-65 H Methyltransferase domain
CINDINJP_00937 3.8e-75 cps2D 5.1.3.2 M RmlD substrate binding domain
CINDINJP_00938 2.5e-41 wecD M Acetyltransferase (GNAT) family
CINDINJP_00940 1.4e-25 ybl78 L Conserved phage C-terminus (Phg_2220_C)
CINDINJP_00941 4.4e-41 S Protein of unknown function (DUF1211)
CINDINJP_00943 5e-86 1.1.1.1 C Zinc-binding dehydrogenase
CINDINJP_00944 4.5e-30 S CHY zinc finger
CINDINJP_00945 2.1e-39 K Transcriptional regulator
CINDINJP_00946 3.4e-83 qorB 1.6.5.2 GM NmrA-like family
CINDINJP_00949 5.6e-126 M Glycosyl transferases group 1
CINDINJP_00950 3.4e-64 M Glycosyl transferases group 1
CINDINJP_00951 3.7e-179 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CINDINJP_00952 5.5e-147 lspL 5.1.3.6 GM RmlD substrate binding domain
CINDINJP_00953 2.2e-104 cps2I S Psort location CytoplasmicMembrane, score
CINDINJP_00954 3.5e-61 cps1B GT2,GT4 M Glycosyl transferases group 1
CINDINJP_00955 2.3e-116 S Glycosyltransferase WbsX
CINDINJP_00956 2.7e-52
CINDINJP_00958 2.5e-57 pglI 2.4.1.293 GT2 M Glycosyltransferase like family 2
CINDINJP_00959 1e-42 GT2 V Glycosyl transferase, family 2
CINDINJP_00960 1.5e-75 M Glycosyltransferase Family 4
CINDINJP_00961 1.8e-79 gtf1 2.4.1.52 GT4 M glycosyl transferase group 1
CINDINJP_00962 3.2e-71 2.4.1.52 GT4 M glycosyl transferase group 1
CINDINJP_00963 6.1e-25 2.4.1.52 GT4 M Glycosyl transferases group 1
CINDINJP_00964 2.2e-25 pglD 2.3.1.203 S Bacterial transferase hexapeptide (six repeats)
CINDINJP_00965 2.4e-76 epsL M Bacterial sugar transferase
CINDINJP_00966 9.1e-167 2.6.1.102 M Belongs to the DegT DnrJ EryC1 family
CINDINJP_00967 1.2e-221 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 M Psort location CytoplasmicMembrane, score
CINDINJP_00968 9.4e-65 cpsD D AAA domain
CINDINJP_00969 1.4e-48 cps4C M Chain length determinant protein
CINDINJP_00970 6.7e-42 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
CINDINJP_00971 2e-178 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
CINDINJP_00972 4.8e-81
CINDINJP_00973 1.6e-79 yjfP S COG1073 Hydrolases of the alpha beta superfamily
CINDINJP_00974 2.3e-113 yitU 3.1.3.104 S hydrolase
CINDINJP_00975 4.5e-60 speG J Acetyltransferase (GNAT) domain
CINDINJP_00976 2e-191 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CINDINJP_00977 1.1e-23 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
CINDINJP_00978 1.3e-204 pipD E Dipeptidase
CINDINJP_00979 2.3e-45
CINDINJP_00980 3.5e-64 K helix_turn_helix, arabinose operon control protein
CINDINJP_00981 8.9e-54 S Membrane
CINDINJP_00982 0.0 rafA 3.2.1.22 G alpha-galactosidase
CINDINJP_00983 6.9e-309 L Helicase C-terminal domain protein
CINDINJP_00984 1.9e-50 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
CINDINJP_00985 1.7e-38 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
CINDINJP_00986 2.4e-113 2.7.7.65 T diguanylate cyclase activity
CINDINJP_00987 0.0 ydaN S Bacterial cellulose synthase subunit
CINDINJP_00988 1.2e-201 ydaM M Glycosyl transferase family group 2
CINDINJP_00989 1.7e-205 S Protein conserved in bacteria
CINDINJP_00990 6.5e-183
CINDINJP_00991 1.7e-129 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
CINDINJP_00992 2.4e-32 2.7.7.65 T GGDEF domain
CINDINJP_00994 1.5e-146 pbuO_1 S Permease family
CINDINJP_00995 6.6e-157 ndh 1.6.99.3 C NADH dehydrogenase
CINDINJP_00996 1.5e-105 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
CINDINJP_00997 1.1e-96 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
CINDINJP_00998 3.6e-220 cydD CO ABC transporter transmembrane region
CINDINJP_00999 2.7e-204 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
CINDINJP_01000 2.5e-141 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
CINDINJP_01001 7.9e-194 cydA 1.10.3.14 C ubiquinol oxidase
CINDINJP_01002 2.6e-159 asnA 6.3.1.1 F aspartate--ammonia ligase
CINDINJP_01003 4.8e-28 xlyB 3.5.1.28 CBM50 M LysM domain
CINDINJP_01004 5e-19 glpE P Rhodanese Homology Domain
CINDINJP_01005 5.5e-49 lytE M LysM domain protein
CINDINJP_01006 1.4e-92 T Calcineurin-like phosphoesterase superfamily domain
CINDINJP_01007 5.7e-85 2.7.7.12 C Domain of unknown function (DUF4931)
CINDINJP_01009 4.4e-74 draG O ADP-ribosylglycohydrolase
CINDINJP_01010 2.5e-102 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
CINDINJP_01011 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CINDINJP_01012 8.6e-62 divIVA D DivIVA domain protein
CINDINJP_01013 1.7e-81 ylmH S S4 domain protein
CINDINJP_01014 3e-19 yggT S YGGT family
CINDINJP_01015 5e-33 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CINDINJP_01016 9.8e-180 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CINDINJP_01017 5.2e-190 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CINDINJP_01018 1.3e-61 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CINDINJP_01019 1.8e-153 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CINDINJP_01020 2.2e-185 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CINDINJP_01021 8.7e-136 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CINDINJP_01022 4e-282 ftsI 3.4.16.4 M Penicillin-binding Protein
CINDINJP_01023 2.5e-11 ftsL D cell division protein FtsL
CINDINJP_01024 8e-142 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CINDINJP_01025 1.5e-55 mraZ K Belongs to the MraZ family
CINDINJP_01026 2.2e-07 S Protein of unknown function (DUF3397)
CINDINJP_01027 1.2e-155 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
CINDINJP_01029 9.8e-100 D Alpha beta
CINDINJP_01030 3.7e-109 aatB ET ABC transporter substrate-binding protein
CINDINJP_01031 1.8e-89 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CINDINJP_01032 1.9e-94 glnP P ABC transporter permease
CINDINJP_01033 1.8e-126 minD D Belongs to the ParA family
CINDINJP_01034 1.9e-76 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
CINDINJP_01035 2e-54 mreD M rod shape-determining protein MreD
CINDINJP_01036 2.1e-88 mreC M Involved in formation and maintenance of cell shape
CINDINJP_01037 3.6e-156 mreB D cell shape determining protein MreB
CINDINJP_01038 4.5e-21 K Cold shock
CINDINJP_01039 8.1e-80 radC L DNA repair protein
CINDINJP_01040 3.7e-137 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
CINDINJP_01041 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CINDINJP_01042 1.9e-196 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CINDINJP_01043 6.4e-162 iscS2 2.8.1.7 E Aminotransferase class V
CINDINJP_01044 5.8e-175 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CINDINJP_01045 4.2e-56 ytsP 1.8.4.14 T GAF domain-containing protein
CINDINJP_01046 7.5e-101 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CINDINJP_01047 2.6e-24 yueI S Protein of unknown function (DUF1694)
CINDINJP_01048 5.1e-184 rarA L recombination factor protein RarA
CINDINJP_01050 6e-72 usp6 T universal stress protein
CINDINJP_01051 1.1e-53 tag 3.2.2.20 L glycosylase
CINDINJP_01052 7.7e-200 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
CINDINJP_01053 4.5e-125 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
CINDINJP_01055 3.3e-75 yviA S Protein of unknown function (DUF421)
CINDINJP_01056 1.8e-27 S Protein of unknown function (DUF3290)
CINDINJP_01057 1.5e-278 pbp2b 3.4.16.4 M Penicillin-binding Protein
CINDINJP_01058 1.2e-296 S membrane
CINDINJP_01059 1.3e-80 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CINDINJP_01060 4e-219 recJ L Single-stranded-DNA-specific exonuclease RecJ
CINDINJP_01061 6.5e-100 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
CINDINJP_01062 8.9e-141 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CINDINJP_01064 1.4e-16
CINDINJP_01065 4.8e-199 oatA I Acyltransferase
CINDINJP_01066 2.2e-214 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CINDINJP_01067 2.8e-305 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CINDINJP_01068 1.2e-140 hprA 1.1.1.29 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CINDINJP_01071 5.1e-42 S Phosphoesterase
CINDINJP_01072 2.2e-73 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CINDINJP_01073 1.1e-60 yslB S Protein of unknown function (DUF2507)
CINDINJP_01074 9.9e-41 trxA O Belongs to the thioredoxin family
CINDINJP_01075 1.4e-309 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CINDINJP_01076 9.5e-18 cvpA S Colicin V production protein
CINDINJP_01077 1.4e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
CINDINJP_01078 1.9e-33 yrzB S Belongs to the UPF0473 family
CINDINJP_01079 2.3e-59 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CINDINJP_01080 2.1e-36 yrzL S Belongs to the UPF0297 family
CINDINJP_01081 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CINDINJP_01082 6.7e-187 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CINDINJP_01083 2.7e-121 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
CINDINJP_01084 7.5e-13
CINDINJP_01085 1e-146 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CINDINJP_01086 1.9e-66 yrjD S LUD domain
CINDINJP_01087 2.1e-245 lutB C 4Fe-4S dicluster domain
CINDINJP_01088 4.5e-116 lutA C Cysteine-rich domain
CINDINJP_01089 2e-208 yfnA E Amino Acid
CINDINJP_01091 4.3e-61 uspA T universal stress protein
CINDINJP_01093 1.8e-12 yajC U Preprotein translocase
CINDINJP_01094 2.9e-207 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
CINDINJP_01095 2.1e-183 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CINDINJP_01096 1.1e-152 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CINDINJP_01097 7.3e-72 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CINDINJP_01098 6e-224 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CINDINJP_01099 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CINDINJP_01100 2.6e-182 rny S Endoribonuclease that initiates mRNA decay
CINDINJP_01101 2.3e-159 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CINDINJP_01102 4.3e-85 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CINDINJP_01103 2.9e-64 ymfM S Helix-turn-helix domain
CINDINJP_01104 8.4e-91 IQ Enoyl-(Acyl carrier protein) reductase
CINDINJP_01105 1.3e-147 ymfH S Peptidase M16
CINDINJP_01106 3.5e-108 ymfF S Peptidase M16 inactive domain protein
CINDINJP_01107 1.6e-284 ftsK D Belongs to the FtsK SpoIIIE SftA family
CINDINJP_01108 4.4e-86 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CINDINJP_01109 1.7e-98 rrmA 2.1.1.187 H Methyltransferase
CINDINJP_01110 4.9e-61 ybaK J Aminoacyl-tRNA editing domain
CINDINJP_01111 5.9e-164 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CINDINJP_01112 4e-197 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CINDINJP_01113 3.2e-21 cutC P Participates in the control of copper homeostasis
CINDINJP_01114 5.3e-131 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
CINDINJP_01115 7.5e-29 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
CINDINJP_01116 2.6e-226 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CINDINJP_01117 5.3e-68 ybbR S YbbR-like protein
CINDINJP_01118 8.5e-127 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CINDINJP_01119 2.4e-71 S Protein of unknown function (DUF1361)
CINDINJP_01120 3.5e-115 murB 1.3.1.98 M Cell wall formation
CINDINJP_01121 1.9e-68 dnaQ 2.7.7.7 L DNA polymerase III
CINDINJP_01122 3.2e-56 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
CINDINJP_01123 2e-143 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
CINDINJP_01124 5.2e-106 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CINDINJP_01125 2.4e-116 ycsE S Sucrose-6F-phosphate phosphohydrolase
CINDINJP_01126 9.1e-42 yxjI
CINDINJP_01127 3.5e-82 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CINDINJP_01128 4.1e-177 thrC 4.2.3.1 E Threonine synthase
CINDINJP_01129 2.4e-128 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CINDINJP_01130 5.2e-168 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
CINDINJP_01131 5.6e-89 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CINDINJP_01132 5e-57 S peptidoglycan catabolic process
CINDINJP_01133 1.5e-194 XK27_08315 M Sulfatase
CINDINJP_01135 6.4e-168 mdtG EGP Major facilitator Superfamily
CINDINJP_01136 6.3e-251 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
CINDINJP_01137 5.7e-84 treR K UTRA
CINDINJP_01138 3.3e-259 treB G phosphotransferase system
CINDINJP_01139 3.5e-63 3.1.3.73 G phosphoglycerate mutase
CINDINJP_01140 2.4e-82 pncA Q isochorismatase
CINDINJP_01141 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
CINDINJP_01142 1.2e-103 ydhQ K UbiC transcription regulator-associated domain protein
CINDINJP_01143 1.7e-171 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
CINDINJP_01144 3.6e-41 K Transcriptional regulator, HxlR family
CINDINJP_01145 8.3e-164 C Luciferase-like monooxygenase
CINDINJP_01147 8.5e-64 V HNH endonuclease
CINDINJP_01148 1.2e-129 3.6.1.13, 3.6.1.55 F NUDIX domain
CINDINJP_01149 1.8e-270 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CINDINJP_01150 3.2e-103 pncA Q Isochorismatase family
CINDINJP_01151 4.3e-07 cylB V ABC-2 type transporter
CINDINJP_01152 3e-99 K Bacterial regulatory proteins, tetR family
CINDINJP_01153 2.9e-289 norB EGP Major Facilitator
CINDINJP_01154 2.5e-38 S RelB antitoxin
CINDINJP_01155 6.7e-105
CINDINJP_01156 1.6e-100 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
CINDINJP_01157 2.6e-247 gshR 1.8.1.7 C Glutathione reductase
CINDINJP_01158 4.9e-179 proV E ABC transporter, ATP-binding protein
CINDINJP_01159 4.4e-262 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
CINDINJP_01160 1.2e-149 cbiO2 P ABC transporter
CINDINJP_01161 1.3e-156 P ABC transporter
CINDINJP_01162 1.3e-132 cbiQ P Cobalt transport protein
CINDINJP_01163 8.5e-89 2.7.7.65 T phosphorelay sensor kinase activity
CINDINJP_01164 2.2e-122 yvgN C Aldo keto reductase
CINDINJP_01165 2.2e-70 K DeoR C terminal sensor domain
CINDINJP_01166 6.8e-46 pts36A 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CINDINJP_01167 6.9e-42 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
CINDINJP_01168 1.2e-216 pts36C G PTS system sugar-specific permease component
CINDINJP_01170 2.3e-104 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
CINDINJP_01172 5.4e-58 S COG NOG19168 non supervised orthologous group
CINDINJP_01173 4.9e-190 XK27_11280 S Psort location CytoplasmicMembrane, score
CINDINJP_01174 7.1e-15 L Plasmid pRiA4b ORF-3-like protein
CINDINJP_01175 9e-106 L Belongs to the 'phage' integrase family
CINDINJP_01176 5.6e-18 3.1.21.3 V Type I restriction modification DNA specificity domain
CINDINJP_01177 1e-60 hsdM 2.1.1.72 V type I restriction-modification system
CINDINJP_01179 2.3e-125 L T/G mismatch-specific endonuclease activity
CINDINJP_01180 4.5e-20 L T/G mismatch-specific endonuclease activity
CINDINJP_01182 8.7e-211 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CINDINJP_01184 1.9e-168 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
CINDINJP_01185 2.5e-211 glnP P ABC transporter
CINDINJP_01187 6.6e-60 uspA T Universal stress protein family
CINDINJP_01188 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
CINDINJP_01189 1.1e-25
CINDINJP_01190 2.2e-201 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
CINDINJP_01191 8e-110 puuD S peptidase C26
CINDINJP_01192 5.2e-83 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CINDINJP_01193 1e-93 lsa S ABC transporter
CINDINJP_01194 9.5e-52 lsa S ABC transporter
CINDINJP_01195 7.2e-149 mepA V MATE efflux family protein
CINDINJP_01196 1.1e-49 L Integrase core domain
CINDINJP_01197 2.7e-23 L PLD-like domain
CINDINJP_01198 6.5e-12 L PLD-like domain
CINDINJP_01200 6.1e-08 yokH G regulation of fungal-type cell wall biogenesis
CINDINJP_01201 9.4e-109 L Initiator Replication protein
CINDINJP_01202 1.7e-38 S Replication initiator protein A (RepA) N-terminus
CINDINJP_01203 3.5e-173 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CINDINJP_01204 2.1e-202 G Pts system
CINDINJP_01205 2.7e-64 licT K transcriptional antiterminator
CINDINJP_01206 7.6e-125 D CobQ CobB MinD ParA nucleotide binding domain protein
CINDINJP_01208 1.2e-48 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
CINDINJP_01209 2.6e-55 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
CINDINJP_01210 4.9e-148 D CobQ CobB MinD ParA nucleotide binding domain protein
CINDINJP_01211 8.5e-35
CINDINJP_01212 1.5e-156 repA S Replication initiator protein A
CINDINJP_01213 4.9e-25
CINDINJP_01214 1.1e-138 S Fic/DOC family
CINDINJP_01215 4.3e-43 relB L Addiction module antitoxin, RelB DinJ family
CINDINJP_01216 8.3e-27
CINDINJP_01217 4.1e-29 S protein conserved in bacteria
CINDINJP_01218 4.9e-72 S protein conserved in bacteria
CINDINJP_01219 4e-41
CINDINJP_01220 2.8e-23
CINDINJP_01221 0.0 L MobA MobL family protein
CINDINJP_01222 2.8e-28
CINDINJP_01223 0.0 pepN 3.4.11.2 E aminopeptidase
CINDINJP_01225 4.1e-44 blpH 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CINDINJP_01226 4.5e-22 agrA KT Response regulator of the LytR AlgR family
CINDINJP_01228 2.4e-19 M domain protein
CINDINJP_01233 1.1e-258 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
CINDINJP_01234 4.6e-79
CINDINJP_01235 1.1e-47 L Transposase
CINDINJP_01236 2.5e-158 L Transposase
CINDINJP_01237 1.4e-10 S Protein of unknown function (DUF3021)
CINDINJP_01238 7e-27 K LytTr DNA-binding domain
CINDINJP_01239 4.1e-60 cylB V ABC-2 type transporter
CINDINJP_01240 2.4e-76 cylA V abc transporter atp-binding protein
CINDINJP_01241 1.5e-25
CINDINJP_01242 1.1e-189 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CINDINJP_01243 1.9e-243 lysP E amino acid
CINDINJP_01244 2.3e-69 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
CINDINJP_01245 3.3e-271 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
CINDINJP_01246 3.2e-14 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CINDINJP_01247 7.2e-57 lssY 3.6.1.27 I phosphatidate phosphatase activity
CINDINJP_01248 1.7e-82 lysR5 K LysR substrate binding domain
CINDINJP_01249 6.5e-119 yxaA S membrane transporter protein
CINDINJP_01250 2.6e-32 ywjH S Protein of unknown function (DUF1634)
CINDINJP_01251 4.1e-126 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CINDINJP_01252 1.7e-225 pipD E Dipeptidase
CINDINJP_01253 2.3e-21 K helix_turn_helix multiple antibiotic resistance protein
CINDINJP_01254 8.8e-166 EGP Major facilitator Superfamily
CINDINJP_01255 5.6e-82 S L,D-transpeptidase catalytic domain
CINDINJP_01256 3.5e-141 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
CINDINJP_01257 1.5e-144 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CINDINJP_01258 7.2e-27 ydiI Q Thioesterase superfamily
CINDINJP_01259 1.2e-56 yfeJ 6.3.5.2 F glutamine amidotransferase
CINDINJP_01260 1.1e-148 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
CINDINJP_01261 6.4e-114 degV S EDD domain protein, DegV family
CINDINJP_01262 2.9e-225 cadA P P-type ATPase
CINDINJP_01263 1.8e-254 E Amino acid permease
CINDINJP_01264 3e-82 S Membrane
CINDINJP_01265 9.1e-50 cps3F
CINDINJP_01266 1.2e-145 Q Imidazolonepropionase and related amidohydrolases
CINDINJP_01267 2.2e-149 E glutamate:sodium symporter activity
CINDINJP_01268 5.5e-144 dapE 3.5.1.18 E Peptidase dimerisation domain
CINDINJP_01269 4.8e-282 fruA 2.7.1.202 GT Phosphotransferase System
CINDINJP_01270 4.1e-151 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CINDINJP_01271 4.5e-87 fruR K DeoR C terminal sensor domain
CINDINJP_01272 2.1e-220 XK27_08635 S UPF0210 protein
CINDINJP_01273 4.1e-27 gcvR T Belongs to the UPF0237 family
CINDINJP_01274 1.4e-38
CINDINJP_01275 1.4e-76 E GDSL-like Lipase/Acylhydrolase family
CINDINJP_01276 9.2e-56 S Protein of unknown function (DUF975)
CINDINJP_01277 2.1e-148 lplA 6.3.1.20 H Lipoate-protein ligase
CINDINJP_01278 4e-230 lpdA 1.8.1.4 C Dehydrogenase
CINDINJP_01279 1.3e-179 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
CINDINJP_01280 5.7e-167 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
CINDINJP_01281 4.7e-178 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
CINDINJP_01284 1.8e-53 S Protein of unknown function (DUF4256)
CINDINJP_01285 2.5e-128 metQ M Belongs to the nlpA lipoprotein family
CINDINJP_01286 2.4e-31 metI U ABC transporter permease
CINDINJP_01287 2.3e-150 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CINDINJP_01289 3.1e-263 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
CINDINJP_01290 8.1e-172 npr 1.11.1.1 S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CINDINJP_01291 1.7e-106 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
CINDINJP_01292 2.5e-83 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
CINDINJP_01293 3e-84 drgA C nitroreductase
CINDINJP_01294 3.3e-134 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
CINDINJP_01295 2.7e-70 metI P ABC transporter permease
CINDINJP_01296 1.5e-149 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CINDINJP_01297 7.4e-107 metQ1 P Belongs to the nlpA lipoprotein family
CINDINJP_01298 2.9e-143 E methionine synthase, vitamin-B12 independent
CINDINJP_01299 3.6e-46 yphJ 4.1.1.44 S decarboxylase
CINDINJP_01300 9.7e-60 yphH S Cupin domain
CINDINJP_01301 2.2e-47 C Flavodoxin
CINDINJP_01302 4.7e-56 S CAAX protease self-immunity
CINDINJP_01303 1.2e-102 pgm3 G phosphoglycerate mutase
CINDINJP_01304 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CINDINJP_01305 4.2e-224 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CINDINJP_01306 1.2e-53 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CINDINJP_01307 2.8e-66 M ErfK YbiS YcfS YnhG
CINDINJP_01308 6.7e-107 XK27_08845 S ABC transporter, ATP-binding protein
CINDINJP_01309 3.3e-113 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
CINDINJP_01310 3.5e-132 ABC-SBP S ABC transporter
CINDINJP_01311 1.3e-159 potD P ABC transporter
CINDINJP_01312 4.5e-104 potC U Binding-protein-dependent transport system inner membrane component
CINDINJP_01313 1.5e-120 potB P ABC transporter permease
CINDINJP_01314 1.1e-166 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CINDINJP_01315 4.3e-100 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
CINDINJP_01316 1.3e-260 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
CINDINJP_01317 4e-236 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CINDINJP_01318 5.1e-13 S Enterocin A Immunity
CINDINJP_01320 2.2e-16 pspC KT PspC domain
CINDINJP_01321 1.2e-15 S Putative adhesin
CINDINJP_01322 3.2e-19 XK27_06920 S Protein of unknown function (DUF1700)
CINDINJP_01323 7.8e-38 K transcriptional regulator PadR family
CINDINJP_01324 2e-46 S CRISPR-associated protein (Cas_Csn2)
CINDINJP_01325 6.5e-37 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CINDINJP_01326 1e-106 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CINDINJP_01327 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
CINDINJP_01328 1e-47 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
CINDINJP_01329 2.4e-75 ung2 3.2.2.27 L Uracil-DNA glycosylase
CINDINJP_01330 1.6e-163 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CINDINJP_01331 4e-129 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CINDINJP_01332 2.1e-70 mltD CBM50 M NlpC P60 family protein
CINDINJP_01333 3.2e-52 manO S Domain of unknown function (DUF956)
CINDINJP_01334 2.1e-147 manN G system, mannose fructose sorbose family IID component
CINDINJP_01335 6.4e-116 manY G PTS system sorbose-specific iic component
CINDINJP_01336 9e-152 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
CINDINJP_01337 7e-80 rbsB G sugar-binding domain protein
CINDINJP_01338 1.6e-100 baeS T Histidine kinase
CINDINJP_01339 3e-79 baeR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
CINDINJP_01340 6.9e-120 G Bacterial extracellular solute-binding protein
CINDINJP_01341 9.1e-71 S Protein of unknown function (DUF554)
CINDINJP_01342 1.8e-39 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CINDINJP_01343 4.2e-32 merR K MerR HTH family regulatory protein
CINDINJP_01344 1.6e-197 lmrB EGP Major facilitator Superfamily
CINDINJP_01345 1.2e-33 S Domain of unknown function (DUF4811)
CINDINJP_01346 1.9e-41 S CAAX protease self-immunity
CINDINJP_01347 1e-60 yceE S haloacid dehalogenase-like hydrolase
CINDINJP_01348 7.6e-74 glcR K DeoR C terminal sensor domain
CINDINJP_01349 2.5e-95 dacA 3.4.16.4 M Belongs to the peptidase S11 family
CINDINJP_01350 5.7e-184 lmrB EGP Major facilitator Superfamily
CINDINJP_01351 1.2e-54 bioY S BioY family
CINDINJP_01352 1.5e-93 S Predicted membrane protein (DUF2207)
CINDINJP_01353 1.4e-19
CINDINJP_01354 1.4e-102 pfoS S Phosphotransferase system, EIIC
CINDINJP_01355 5.3e-120 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CINDINJP_01356 1.1e-43 K helix_turn_helix isocitrate lyase regulation
CINDINJP_01357 5.7e-54 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
CINDINJP_01358 2.2e-58 ktrA P TrkA-N domain
CINDINJP_01359 2.1e-114 ntpJ P Potassium uptake protein
CINDINJP_01360 2e-183 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
CINDINJP_01361 6.1e-282 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
CINDINJP_01362 1.8e-217 scrB 3.2.1.26 GH32 G invertase
CINDINJP_01363 1.7e-147 scrR K helix_turn _helix lactose operon repressor
CINDINJP_01366 3.4e-75 L Integrase core domain
CINDINJP_01367 1.8e-20 L PFAM transposase IS3 IS911 family protein
CINDINJP_01368 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
CINDINJP_01369 1.7e-32 P Heavy-metal-associated domain
CINDINJP_01370 7.1e-17 tnp L Transposase IS66 family
CINDINJP_01371 2.9e-85 3.6.4.12 L Belongs to the helicase family. RecQ subfamily
CINDINJP_01372 8.5e-50 O ATPase family associated with various cellular activities (AAA)
CINDINJP_01373 1.3e-63
CINDINJP_01381 5.6e-10 hol S Bacteriophage holin
CINDINJP_01382 7.2e-130 lys 3.5.1.104 M Glycosyl hydrolases family 25
CINDINJP_01383 1.7e-15
CINDINJP_01386 5.9e-87 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CINDINJP_01387 2.1e-67 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
CINDINJP_01388 9.1e-43 yodB K Transcriptional regulator, HxlR family
CINDINJP_01389 7.4e-173 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CINDINJP_01390 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CINDINJP_01391 9.3e-129 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CINDINJP_01392 1.8e-97 udk 2.7.1.48 F Cytidine monophosphokinase
CINDINJP_01393 6.5e-68 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CINDINJP_01394 6.4e-12
CINDINJP_01395 1.5e-143 iunH2 3.2.2.1 F nucleoside hydrolase
CINDINJP_01396 7.6e-43 XK27_03960 S Protein of unknown function (DUF3013)
CINDINJP_01397 5.8e-118 prmA J Ribosomal protein L11 methyltransferase
CINDINJP_01398 3.1e-77 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
CINDINJP_01399 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CINDINJP_01400 1.7e-54 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CINDINJP_01401 6.7e-57 3.1.3.18 J HAD-hyrolase-like
CINDINJP_01402 1.5e-42 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CINDINJP_01403 7.3e-129 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
CINDINJP_01404 1.3e-75 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CINDINJP_01405 2.7e-204 pyrP F Permease
CINDINJP_01406 4.3e-115 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
CINDINJP_01407 5.9e-192 carB 6.3.5.5 F Carbamoyl-phosphate synthase
CINDINJP_01408 1.5e-84 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CINDINJP_01409 2.3e-89 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CINDINJP_01410 7.5e-135 K Transcriptional regulator
CINDINJP_01411 6.3e-144 ppaC 3.6.1.1 C inorganic pyrophosphatase
CINDINJP_01412 8.6e-115 glcR K DeoR C terminal sensor domain
CINDINJP_01413 4.5e-171 patA 2.6.1.1 E Aminotransferase
CINDINJP_01414 2.4e-88 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
CINDINJP_01416 1.1e-35 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CINDINJP_01417 2.7e-173 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
CINDINJP_01418 1.8e-36 rnhA 3.1.26.4 L Ribonuclease HI
CINDINJP_01419 6.2e-21 S Family of unknown function (DUF5322)
CINDINJP_01420 3.8e-256 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
CINDINJP_01421 1.8e-38
CINDINJP_01424 2.5e-149 EGP Sugar (and other) transporter
CINDINJP_01425 6e-78 trmK 2.1.1.217 S SAM-dependent methyltransferase
CINDINJP_01426 4.8e-103 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CINDINJP_01427 1.9e-183 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
CINDINJP_01428 4.2e-73 alkD L DNA alkylation repair enzyme
CINDINJP_01429 3.8e-136 EG EamA-like transporter family
CINDINJP_01430 3.6e-150 S Tetratricopeptide repeat protein
CINDINJP_01431 6.9e-205 hisS 6.1.1.21 J histidyl-tRNA synthetase
CINDINJP_01432 4.3e-298 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CINDINJP_01433 3.5e-126 corA P CorA-like Mg2+ transporter protein
CINDINJP_01434 8.5e-161 nhaC C Na H antiporter NhaC
CINDINJP_01435 1.5e-130 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CINDINJP_01436 5.8e-81 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
CINDINJP_01438 7.2e-92 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CINDINJP_01439 2.9e-154 iscS 2.8.1.7 E Aminotransferase class V
CINDINJP_01440 3.7e-41 XK27_04120 S Putative amino acid metabolism
CINDINJP_01441 4.3e-203 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CINDINJP_01442 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CINDINJP_01443 4.3e-15 S Protein of unknown function (DUF2929)
CINDINJP_01444 0.0 dnaE 2.7.7.7 L DNA polymerase
CINDINJP_01445 1.9e-167 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CINDINJP_01446 6.3e-310 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
CINDINJP_01448 1e-39 ypaA S Protein of unknown function (DUF1304)
CINDINJP_01449 3.2e-83 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CINDINJP_01450 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CINDINJP_01451 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CINDINJP_01452 1.2e-196 FbpA K Fibronectin-binding protein
CINDINJP_01453 3.1e-40 K Transcriptional regulator
CINDINJP_01454 2.2e-117 degV S EDD domain protein, DegV family
CINDINJP_01455 7.8e-71 lepB 3.4.21.89 U Signal peptidase, peptidase S26
CINDINJP_01456 1.2e-36 6.3.3.2 I Protein conserved in bacteria
CINDINJP_01457 1.3e-187 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CINDINJP_01458 1.7e-79 yjjH S Calcineurin-like phosphoesterase
CINDINJP_01459 3.1e-95 EG EamA-like transporter family
CINDINJP_01460 2.3e-85 natB CP ABC-type Na efflux pump, permease component
CINDINJP_01461 6.2e-112 natA S Domain of unknown function (DUF4162)
CINDINJP_01462 4.8e-23 K Acetyltransferase (GNAT) domain
CINDINJP_01464 8.5e-36 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CINDINJP_01465 4.5e-228 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
CINDINJP_01466 2.7e-171 rpsA 1.17.7.4 J Ribosomal protein S1
CINDINJP_01467 9.1e-58 arsC 1.20.4.1 T Low molecular weight phosphatase family
CINDINJP_01468 2e-151 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CINDINJP_01469 4.9e-29 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CINDINJP_01470 1.4e-175 dltB M MBOAT, membrane-bound O-acyltransferase family
CINDINJP_01471 4.5e-219 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CINDINJP_01472 2.6e-07 dltX S D-Ala-teichoic acid biosynthesis protein
CINDINJP_01473 4.5e-90 recO L Involved in DNA repair and RecF pathway recombination
CINDINJP_01474 1e-154 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CINDINJP_01475 3.6e-30 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
CINDINJP_01476 3e-60 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CINDINJP_01477 3.5e-153 phoH T phosphate starvation-inducible protein PhoH
CINDINJP_01478 7.5e-83 lytH 3.5.1.28 M Ami_3
CINDINJP_01479 2e-86 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
CINDINJP_01480 5.9e-12 M Lysin motif
CINDINJP_01481 2e-128 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
CINDINJP_01482 7.1e-59 ypbB 5.1.3.1 S Helix-turn-helix domain
CINDINJP_01483 2.9e-221 mntH P H( )-stimulated, divalent metal cation uptake system
CINDINJP_01484 1.3e-44 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
CINDINJP_01485 7.1e-120 ica2 GT2 M Glycosyl transferase family group 2
CINDINJP_01486 4.8e-44
CINDINJP_01487 2.8e-91 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CINDINJP_01489 2.8e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CINDINJP_01490 1.3e-212 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CINDINJP_01491 8.1e-280 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
CINDINJP_01492 3.7e-168 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
CINDINJP_01493 3.3e-117 EGP Major Facilitator Superfamily
CINDINJP_01494 1.1e-124 akr5f 1.1.1.346 S reductase
CINDINJP_01495 2.7e-72 K Transcriptional regulator
CINDINJP_01496 9.9e-110 pepE 3.4.13.21 E Alpha/beta hydrolase of unknown function (DUF915)
CINDINJP_01497 9.7e-69 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CINDINJP_01498 2.3e-66 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
CINDINJP_01499 2.6e-96 3.1.21.3 V Type I restriction modification DNA specificity domain
CINDINJP_01500 1.6e-131 L Belongs to the 'phage' integrase family
CINDINJP_01501 3.3e-64
CINDINJP_01502 1.5e-46
CINDINJP_01503 6.4e-105 L K02A2.6-like
CINDINJP_01504 1.2e-35 L transposition, RNA-mediated
CINDINJP_01505 1.1e-133 RCA1 O Ribulose bisphosphate carboxylase oxygenase activase
CINDINJP_01506 3.2e-47 T receptor-like protein kinase
CINDINJP_01507 3e-95 L Transposase IS66 family
CINDINJP_01508 1.1e-31 S Calcineurin-like phosphoesterase
CINDINJP_01509 8.7e-211 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CINDINJP_01510 5.1e-260 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
CINDINJP_01511 1.6e-169 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CINDINJP_01512 7.8e-131 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CINDINJP_01513 3e-282 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CINDINJP_01514 1.5e-76 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
CINDINJP_01515 1.9e-96 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CINDINJP_01516 1.1e-40 yabR J RNA binding
CINDINJP_01517 1e-21 divIC D Septum formation initiator
CINDINJP_01518 3.6e-31 yabO J S4 domain protein
CINDINJP_01519 1.2e-139 yabM S Polysaccharide biosynthesis protein
CINDINJP_01520 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CINDINJP_01521 6.5e-75 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CINDINJP_01522 4.8e-158 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
CINDINJP_01523 2.5e-86 S (CBS) domain
CINDINJP_01524 1.4e-141 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CINDINJP_01525 1.1e-207 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CINDINJP_01526 7.2e-53 perR P Belongs to the Fur family
CINDINJP_01527 7.6e-58 S LexA-binding, inner membrane-associated putative hydrolase
CINDINJP_01528 4.7e-106 sbcC L Putative exonuclease SbcCD, C subunit
CINDINJP_01529 9.8e-115 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
CINDINJP_01530 6.8e-35 M LysM domain protein
CINDINJP_01531 8.6e-278 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
CINDINJP_01532 1.4e-85 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
CINDINJP_01533 1.9e-33 ygfC K transcriptional regulator (TetR family)
CINDINJP_01534 2.6e-109 hrtB V ABC transporter permease
CINDINJP_01535 4e-87 devA 3.6.3.25 V ABC transporter, ATP-binding protein
CINDINJP_01536 0.0 helD 3.6.4.12 L DNA helicase
CINDINJP_01537 3.1e-246 yjbQ P TrkA C-terminal domain protein
CINDINJP_01538 5.7e-28
CINDINJP_01539 1.1e-60 rpsI J Belongs to the universal ribosomal protein uS9 family
CINDINJP_01540 5.5e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CINDINJP_01541 2.5e-125 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CINDINJP_01542 2.8e-108 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CINDINJP_01543 6.7e-111 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CINDINJP_01544 1.8e-100 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CINDINJP_01545 3.7e-53 rplQ J Ribosomal protein L17
CINDINJP_01546 1.3e-155 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CINDINJP_01547 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CINDINJP_01548 4.4e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CINDINJP_01549 2.5e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
CINDINJP_01550 4.8e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CINDINJP_01551 3.4e-107 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CINDINJP_01552 4.4e-207 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CINDINJP_01553 1e-67 rplO J Binds to the 23S rRNA
CINDINJP_01554 2.1e-22 rpmD J Ribosomal protein L30
CINDINJP_01555 1.3e-82 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CINDINJP_01556 9.6e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CINDINJP_01557 3.2e-87 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CINDINJP_01558 2.5e-65 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CINDINJP_01559 4.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CINDINJP_01560 1.3e-91 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CINDINJP_01561 7e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CINDINJP_01562 5.1e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CINDINJP_01563 8e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CINDINJP_01564 9e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
CINDINJP_01565 6.2e-73 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CINDINJP_01566 5.2e-116 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CINDINJP_01567 1.5e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CINDINJP_01568 1e-44 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CINDINJP_01569 4.1e-142 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CINDINJP_01570 2.9e-39 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CINDINJP_01571 1e-100 rplD J Forms part of the polypeptide exit tunnel
CINDINJP_01572 4.5e-109 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CINDINJP_01573 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
CINDINJP_01574 3.3e-167 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CINDINJP_01575 2.5e-78 K rpiR family
CINDINJP_01576 2.6e-54 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CINDINJP_01577 3.2e-146 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
CINDINJP_01578 6.5e-21 K Acetyltransferase (GNAT) domain
CINDINJP_01579 9e-184 steT E amino acid
CINDINJP_01580 9.6e-78 glnP P ABC transporter permease
CINDINJP_01581 1.2e-85 gluC P ABC transporter permease
CINDINJP_01582 1.9e-99 glnH ET ABC transporter
CINDINJP_01583 3.7e-102 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CINDINJP_01584 1.3e-09
CINDINJP_01585 5e-98
CINDINJP_01586 3e-12 3.2.1.14 GH18
CINDINJP_01587 5.4e-53 zur P Belongs to the Fur family
CINDINJP_01588 6.3e-212 yfnA E Amino Acid
CINDINJP_01589 9.6e-251 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CINDINJP_01590 0.0 L Helicase C-terminal domain protein
CINDINJP_01591 2.7e-79 ptp2 3.1.3.48 T Tyrosine phosphatase family
CINDINJP_01592 2.1e-180 yhdP S Transporter associated domain
CINDINJP_01593 4.8e-26
CINDINJP_01594 3.7e-75 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
CINDINJP_01595 9.6e-132 bacI V MacB-like periplasmic core domain
CINDINJP_01596 9.6e-97 V ABC transporter
CINDINJP_01597 2.2e-63 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CINDINJP_01598 1.4e-156 gmuE 2.7.1.2, 2.7.1.4 GK ROK family
CINDINJP_01599 8.1e-140 V MatE
CINDINJP_01600 1.6e-43 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CINDINJP_01601 5e-87 S Alpha beta hydrolase
CINDINJP_01602 1.6e-94 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CINDINJP_01603 2.5e-174 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
CINDINJP_01604 4.6e-112 argE 3.5.1.18 E Peptidase dimerisation domain
CINDINJP_01605 5e-102 IQ Enoyl-(Acyl carrier protein) reductase
CINDINJP_01606 2.5e-33 XK27_01315 S Protein of unknown function (DUF2829)
CINDINJP_01607 4.3e-54 queT S QueT transporter
CINDINJP_01609 7.3e-65 degV S Uncharacterised protein, DegV family COG1307
CINDINJP_01610 2e-21 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CINDINJP_01611 2.7e-21 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CINDINJP_01612 3.2e-34 trxA O Belongs to the thioredoxin family
CINDINJP_01613 4.9e-87 S Sucrose-6F-phosphate phosphohydrolase
CINDINJP_01614 3.2e-121 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CINDINJP_01615 2.8e-49 S Threonine/Serine exporter, ThrE
CINDINJP_01616 7.3e-82 thrE S Putative threonine/serine exporter
CINDINJP_01617 3.1e-27 cspC K Cold shock protein
CINDINJP_01618 8.3e-90 sirR K Helix-turn-helix diphteria tox regulatory element
CINDINJP_01619 2.9e-93 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
CINDINJP_01620 5.4e-23
CINDINJP_01621 1.2e-58 3.6.1.27 I phosphatase
CINDINJP_01622 3.1e-25
CINDINJP_01623 2.4e-65 I alpha/beta hydrolase fold
CINDINJP_01624 1.3e-38 azlD S branched-chain amino acid
CINDINJP_01625 1.1e-104 azlC E AzlC protein
CINDINJP_01626 1.6e-17
CINDINJP_01627 1.3e-119 xth 3.1.11.2 L exodeoxyribonuclease III
CINDINJP_01628 3.8e-99 V domain protein
CINDINJP_01629 3.9e-10
CINDINJP_01633 6.2e-43 S virion core protein, lumpy skin disease virus
CINDINJP_01634 2.1e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CINDINJP_01635 1.3e-173 malY 4.4.1.8 E Aminotransferase, class I
CINDINJP_01636 5.3e-118 K AI-2E family transporter
CINDINJP_01637 8.9e-61 EG EamA-like transporter family
CINDINJP_01638 3.9e-76 L haloacid dehalogenase-like hydrolase
CINDINJP_01639 5.8e-117 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
CINDINJP_01640 9.1e-67 1.5.1.38 S NADPH-dependent FMN reductase
CINDINJP_01641 2.8e-24 S Calcineurin-like phosphoesterase
CINDINJP_01642 5.4e-209 O ubiquitin
CINDINJP_01644 2.9e-93 yihY S Belongs to the UPF0761 family
CINDINJP_01645 2.8e-12 mltD CBM50 M Lysin motif
CINDINJP_01646 1.2e-152 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
CINDINJP_01647 1.2e-143 map 3.4.11.18 E Methionine Aminopeptidase
CINDINJP_01648 5.1e-54 fld C Flavodoxin
CINDINJP_01649 8.7e-53 gtcA S Teichoic acid glycosylation protein
CINDINJP_01650 0.0 S Bacterial membrane protein YfhO
CINDINJP_01651 5.2e-120 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
CINDINJP_01652 1.7e-122 S Sulfite exporter TauE/SafE
CINDINJP_01653 1.1e-70 K Sugar-specific transcriptional regulator TrmB
CINDINJP_01654 9.3e-169 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CINDINJP_01655 3.5e-182 pepS E Thermophilic metalloprotease (M29)
CINDINJP_01656 3e-266 E Amino acid permease
CINDINJP_01657 4.9e-85 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
CINDINJP_01658 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
CINDINJP_01659 2.9e-78 galM 5.1.3.3 G Aldose 1-epimerase
CINDINJP_01660 4.3e-213 malT G Transporter, major facilitator family protein
CINDINJP_01661 4.2e-101 malR K Transcriptional regulator, LacI family
CINDINJP_01662 2.3e-279 kup P Transport of potassium into the cell
CINDINJP_01664 2e-20 S Domain of unknown function (DUF3284)
CINDINJP_01665 5.2e-160 yfmL L DEAD DEAH box helicase
CINDINJP_01666 7e-128 mocA S Oxidoreductase
CINDINJP_01667 2e-24 S Domain of unknown function (DUF4828)
CINDINJP_01668 1.2e-175 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
CINDINJP_01669 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
CINDINJP_01670 4.7e-194 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
CINDINJP_01671 1.4e-119 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
CINDINJP_01672 1.2e-160 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CINDINJP_01673 2.8e-266 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CINDINJP_01674 3.6e-220 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
CINDINJP_01675 4.9e-42 O ADP-ribosylglycohydrolase
CINDINJP_01676 5.5e-221 gdhA 1.4.1.4 E Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CINDINJP_01677 6.4e-209 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
CINDINJP_01678 9.7e-35 K GNAT family
CINDINJP_01679 1.7e-40
CINDINJP_01681 1.6e-159 mgtE P Acts as a magnesium transporter
CINDINJP_01682 7.6e-94 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
CINDINJP_01683 1.3e-116 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CINDINJP_01684 2.5e-94 yjbM 2.7.6.5 S RelA SpoT domain protein
CINDINJP_01685 9e-255 topB 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
CINDINJP_01686 1.7e-35 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
CINDINJP_01687 6.3e-193 pbuX F xanthine permease
CINDINJP_01688 9.7e-74 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CINDINJP_01689 1.6e-61 acmC 3.2.1.96 NU mannosyl-glycoprotein
CINDINJP_01690 5.5e-64 S ECF transporter, substrate-specific component
CINDINJP_01691 1.7e-126 mleP S Sodium Bile acid symporter family
CINDINJP_01692 1.7e-248 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
CINDINJP_01693 2.7e-49 mleR K LysR family
CINDINJP_01694 1.1e-56 K transcriptional
CINDINJP_01695 5.9e-41 K Bacterial regulatory proteins, tetR family
CINDINJP_01696 6.1e-60 T Belongs to the universal stress protein A family
CINDINJP_01697 8.1e-44 K Copper transport repressor CopY TcrY
CINDINJP_01698 2.1e-116 3.2.1.18 GH33 M Rib/alpha-like repeat
CINDINJP_01699 1.4e-113 3.2.1.18 GH33 M Rib/alpha-like repeat
CINDINJP_01701 1.9e-95 ypuA S Protein of unknown function (DUF1002)
CINDINJP_01702 8.4e-60 dedA 3.1.3.1 S SNARE associated Golgi protein
CINDINJP_01703 1.4e-162 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CINDINJP_01704 4.6e-36 yncA 2.3.1.79 S Maltose acetyltransferase
CINDINJP_01705 4e-206 yflS P Sodium:sulfate symporter transmembrane region
CINDINJP_01706 7.2e-200 frdC 1.3.5.4 C FAD binding domain
CINDINJP_01707 3.9e-238 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CINDINJP_01708 2e-14 ybaN S Protein of unknown function (DUF454)
CINDINJP_01709 8.2e-177 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
CINDINJP_01710 8.8e-58 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CINDINJP_01711 2.8e-96 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CINDINJP_01712 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
CINDINJP_01713 5.1e-72 ywlG S Belongs to the UPF0340 family
CINDINJP_01714 5.2e-65 S Acetyltransferase (GNAT) domain
CINDINJP_01716 3.5e-50 K Cro/C1-type HTH DNA-binding domain
CINDINJP_01717 1.6e-174 spoVK O ATPase family associated with various cellular activities (AAA)
CINDINJP_01720 8.3e-126 S Bacteriophage abortive infection AbiH
CINDINJP_01721 4.5e-86 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain protein
CINDINJP_01722 3.2e-37 hsdM 2.1.1.72 V type I restriction-modification system
CINDINJP_01723 1.3e-162 hsdM 2.1.1.72 V cog cog0286
CINDINJP_01724 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
CINDINJP_01725 5.4e-19 K Cro/C1-type HTH DNA-binding domain
CINDINJP_01726 9.1e-78 L AAA domain
CINDINJP_01727 4.1e-16
CINDINJP_01728 1e-22
CINDINJP_01729 1.3e-75 K phage regulatory protein, rha family
CINDINJP_01730 1.3e-17
CINDINJP_01731 1.4e-121 L Mrr N-terminal domain
CINDINJP_01732 9.9e-210 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CINDINJP_01733 9.8e-146 yegS 2.7.1.107 G Lipid kinase
CINDINJP_01734 2.8e-255 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CINDINJP_01735 4e-233 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CINDINJP_01736 7.6e-38 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CINDINJP_01737 9.3e-161 camS S sex pheromone
CINDINJP_01738 1.3e-279 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CINDINJP_01739 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
CINDINJP_01740 4.2e-145 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CINDINJP_01742 1.5e-30 tnp L MULE transposase domain
CINDINJP_01744 6.4e-44 XK27_01125 L PFAM IS66 Orf2 family protein
CINDINJP_01745 9.6e-102 L PLD-like domain
CINDINJP_01747 1.3e-10 tcdC
CINDINJP_01749 1.8e-231 tetP J elongation factor G
CINDINJP_01750 1.2e-31 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CINDINJP_01752 2e-216 yjeM E Amino Acid
CINDINJP_01753 5.3e-62 yphA GM NAD dependent epimerase/dehydratase family
CINDINJP_01754 1.9e-75 K Helix-turn-helix domain, rpiR family
CINDINJP_01755 2.5e-92 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CINDINJP_01756 2.3e-127 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
CINDINJP_01757 2.2e-90 nanK GK ROK family
CINDINJP_01758 3.8e-54 ndk 2.7.4.6 F Belongs to the NDK family
CINDINJP_01759 3.3e-63 G Xylose isomerase domain protein TIM barrel
CINDINJP_01760 3.3e-153 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
CINDINJP_01761 1e-199 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CINDINJP_01762 2.1e-71 L PFAM transposase IS200-family protein
CINDINJP_01763 9.8e-24 L Integrase core domain
CINDINJP_01764 5e-74 sdaAB 4.3.1.17 E Serine dehydratase beta chain
CINDINJP_01765 4.7e-112 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
CINDINJP_01766 7.7e-41 S Iron-sulfur cluster assembly protein
CINDINJP_01767 1.3e-66 S Protein of unknown function (DUF1440)
CINDINJP_01768 7.7e-82 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
CINDINJP_01769 9.2e-188 mtnE 2.6.1.83 E Aminotransferase
CINDINJP_01771 2.7e-15
CINDINJP_01772 6.6e-87 S Haloacid dehalogenase-like hydrolase
CINDINJP_01773 1.1e-37 blpT
CINDINJP_01776 5.5e-08
CINDINJP_01778 1.1e-16
CINDINJP_01783 6.6e-13 2.7.13.3 T GHKL domain
CINDINJP_01784 4.7e-23 2.7.13.3 T GHKL domain
CINDINJP_01785 1.3e-55 K LytTr DNA-binding domain
CINDINJP_01790 1.4e-70 xerD L Phage integrase, N-terminal SAM-like domain
CINDINJP_01791 4.8e-266 fbp 3.1.3.11 G phosphatase activity
CINDINJP_01792 1.9e-20 M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CINDINJP_01793 6.2e-171 tonB M YSIRK type signal peptide
CINDINJP_01794 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
CINDINJP_01795 3e-98 fabK 1.3.1.9 S Nitronate monooxygenase
CINDINJP_01796 4.7e-163 ytbD EGP Major facilitator Superfamily
CINDINJP_01797 4e-110 IQ NAD dependent epimerase/dehydratase family
CINDINJP_01798 5.8e-104 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
CINDINJP_01799 4.5e-43 gutM K Glucitol operon activator protein (GutM)
CINDINJP_01800 4.8e-83 srlA G PTS system enzyme II sorbitol-specific factor
CINDINJP_01801 1.4e-136 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
CINDINJP_01802 2.4e-36 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
CINDINJP_01803 9.1e-63 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
CINDINJP_01804 5.5e-117 ldhA 1.1.1.28 CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CINDINJP_01805 2.5e-136 pfoS S Phosphotransferase system, EIIC
CINDINJP_01807 2.6e-207 spaB S Lantibiotic dehydratase, C terminus
CINDINJP_01808 4.3e-184 spaT V ATPases associated with a variety of cellular activities
CINDINJP_01809 2.2e-75 spaC2 V Lanthionine synthetase C-like protein
CINDINJP_01810 8.8e-90 KT Transcriptional regulatory protein, C terminal
CINDINJP_01811 4.9e-105 2.7.13.3 T His Kinase A (phosphoacceptor) domain
CINDINJP_01812 1.1e-73 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
CINDINJP_01813 9.6e-47 V ABC-2 family transporter protein
CINDINJP_01815 2.5e-27 K Helix-turn-helix XRE-family like proteins
CINDINJP_01816 7.7e-20 S protein encoded in hypervariable junctions of pilus gene clusters
CINDINJP_01818 4.9e-224 E ABC transporter, substratebinding protein
CINDINJP_01819 3.6e-116 sufC O FeS assembly ATPase SufC
CINDINJP_01820 5.6e-143 sufD O FeS assembly protein SufD
CINDINJP_01821 3.3e-148 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CINDINJP_01822 4.9e-41 nifU C SUF system FeS assembly protein, NifU family
CINDINJP_01823 9.4e-240 sufB O assembly protein SufB
CINDINJP_01824 3.3e-45 S VIT family
CINDINJP_01825 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
CINDINJP_01826 1.5e-136 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CINDINJP_01827 2.1e-112 rssA S Phospholipase, patatin family
CINDINJP_01828 8.2e-16
CINDINJP_01829 1.5e-29
CINDINJP_01830 2.3e-79 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
CINDINJP_01831 1.2e-99 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CINDINJP_01832 1.8e-08 K transcriptional
CINDINJP_01833 3.4e-10 S Protein of unknown function (DUF805)
CINDINJP_01835 1.5e-78 yvfR V ABC transporter
CINDINJP_01836 1.9e-53 yvfS V ABC-2 type transporter
CINDINJP_01837 5.4e-57 salK 2.7.13.3 T Histidine kinase
CINDINJP_01838 2.4e-75 desR K helix_turn_helix, Lux Regulon
CINDINJP_01839 1.4e-70 ptp3 3.1.3.48 T Tyrosine phosphatase family
CINDINJP_01840 1.6e-90 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
CINDINJP_01844 1.4e-142 xerS L Phage integrase family
CINDINJP_01845 1.3e-70 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
CINDINJP_01846 6.5e-138 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CINDINJP_01847 1.6e-217 1.3.5.4 C FAD binding domain
CINDINJP_01848 4.6e-117 IQ Enoyl-(Acyl carrier protein) reductase
CINDINJP_01849 1.6e-138 G Xylose isomerase-like TIM barrel
CINDINJP_01850 3.7e-72 K Transcriptional regulator, LysR family
CINDINJP_01851 1.4e-98 EGP Major Facilitator Superfamily
CINDINJP_01852 2.6e-129 EGP Major Facilitator Superfamily
CINDINJP_01853 1e-88 RBCS 4.1.1.39 E RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site
CINDINJP_01854 9.8e-28 rbcL G Ribulose bisphosphate carboxylase large chain
CINDINJP_01857 2.2e-131 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
CINDINJP_01858 1.4e-186 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CINDINJP_01859 3.7e-159 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
CINDINJP_01860 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
CINDINJP_01861 9.5e-119 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CINDINJP_01863 1.6e-55 ctsR K Belongs to the CtsR family
CINDINJP_01864 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CINDINJP_01865 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CINDINJP_01866 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CINDINJP_01867 3.3e-23 pilD 3.4.23.43 NOU aspartic-type endopeptidase activity
CINDINJP_01868 6.1e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CINDINJP_01869 1.3e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CINDINJP_01870 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CINDINJP_01871 1.3e-91 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
CINDINJP_01872 1.2e-89 patB 4.4.1.8 E Aminotransferase, class I
CINDINJP_01873 2.5e-113 K response regulator
CINDINJP_01874 3.3e-142 hpk31 2.7.13.3 T Histidine kinase
CINDINJP_01875 2.2e-90 lacX 5.1.3.3 G Aldose 1-epimerase
CINDINJP_01876 1.9e-20 G Transporter, major facilitator family protein
CINDINJP_01877 4.3e-116 G Transporter, major facilitator family protein
CINDINJP_01878 2e-223 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CINDINJP_01879 2.1e-245 yhcA V ABC transporter, ATP-binding protein
CINDINJP_01880 5.8e-35 K Bacterial regulatory proteins, tetR family
CINDINJP_01881 4.6e-37 lmrA V ABC transporter, ATP-binding protein
CINDINJP_01882 1.6e-172 lmrA V ABC transporter, ATP-binding protein
CINDINJP_01883 3.3e-253 yfiC V ABC transporter
CINDINJP_01885 3.2e-45 yjcF K protein acetylation
CINDINJP_01886 1.1e-54 L phosphatase homologous to the C-terminal domain of histone macroH2A1
CINDINJP_01887 1.5e-71 lemA S LemA family
CINDINJP_01888 1.3e-114 htpX O Belongs to the peptidase M48B family
CINDINJP_01890 2e-271 helD 3.6.4.12 L DNA helicase
CINDINJP_01891 9.3e-128 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CINDINJP_01892 2.3e-171 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
CINDINJP_01893 9.4e-103 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
CINDINJP_01894 8.4e-83 ybhF_2 V abc transporter atp-binding protein
CINDINJP_01895 3.5e-104 ybhR V ABC transporter
CINDINJP_01896 2.3e-31 K Transcriptional regulator
CINDINJP_01897 7.2e-43 VPA1512 ET Bacterial extracellular solute-binding proteins, family 3
CINDINJP_01898 2.1e-153 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
CINDINJP_01899 4.3e-127
CINDINJP_01900 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CINDINJP_01901 8.3e-105 tatD L hydrolase, TatD family
CINDINJP_01902 1.7e-86 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CINDINJP_01903 7.5e-134 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CINDINJP_01904 1.2e-22 veg S Biofilm formation stimulator VEG
CINDINJP_01905 1.7e-90 S Alpha/beta hydrolase of unknown function (DUF915)
CINDINJP_01906 4.2e-134 arcT 2.6.1.1 E Cys/Met metabolism PLP-dependent enzyme
CINDINJP_01907 6.6e-46 argR K Regulates arginine biosynthesis genes
CINDINJP_01908 2.8e-117 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CINDINJP_01909 1.3e-155 amtB P ammonium transporter
CINDINJP_01911 1.4e-92 sip L Belongs to the 'phage' integrase family
CINDINJP_01912 8.8e-61
CINDINJP_01913 1.5e-13
CINDINJP_01914 1.7e-17 L nuclease
CINDINJP_01915 1.1e-40 XK27_10050 K Peptidase S24-like
CINDINJP_01918 1.5e-16
CINDINJP_01920 7.5e-15 K Cro/C1-type HTH DNA-binding domain
CINDINJP_01923 1.2e-12 cro K Helix-turn-helix XRE-family like proteins
CINDINJP_01924 6.7e-80 S DNA binding
CINDINJP_01928 1.9e-53 S Putative HNHc nuclease
CINDINJP_01929 9.6e-29 S Phage replisome organizer, N-terminal domain protein
CINDINJP_01932 1.6e-25
CINDINJP_01933 1.7e-70
CINDINJP_01937 1.9e-08
CINDINJP_01938 8.6e-53 L Belongs to the 'phage' integrase family
CINDINJP_01940 2.3e-71 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
CINDINJP_01944 1.4e-32 arpU S Phage transcriptional regulator, ArpU family
CINDINJP_01945 6.8e-47 gepA S Protein of unknown function (DUF4065)
CINDINJP_01946 6.3e-59
CINDINJP_01950 2e-86 L HNH nucleases
CINDINJP_01951 1.6e-79 L Phage terminase, small subunit
CINDINJP_01952 0.0 S Phage Terminase
CINDINJP_01954 1.7e-194 S Phage portal protein
CINDINJP_01955 1e-112 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
CINDINJP_01956 1.9e-196 S Phage capsid family
CINDINJP_01957 3.7e-22 S Phage gp6-like head-tail connector protein
CINDINJP_01958 1.3e-49 S Phage head-tail joining protein
CINDINJP_01959 4.8e-54 S Bacteriophage HK97-gp10, putative tail-component
CINDINJP_01960 7.8e-56 S Protein of unknown function (DUF806)
CINDINJP_01961 4.6e-78 S Phage tail tube protein
CINDINJP_01962 5.7e-17 S Phage tail assembly chaperone proteins, TAC
CINDINJP_01964 1.5e-305 M Phage tail tape measure protein TP901
CINDINJP_01965 6e-77 S Phage tail protein
CINDINJP_01966 8.8e-118 rny D peptidase
CINDINJP_01968 1.3e-147 XK27_08315 M Sulfatase
CINDINJP_01969 3.2e-129 S Bacterial membrane protein YfhO
CINDINJP_01970 8.8e-102 S Bacterial membrane protein, YfhO
CINDINJP_01971 8.5e-22 S Bacterial membrane protein, YfhO
CINDINJP_01972 2.9e-44 S Bacterial membrane protein, YfhO
CINDINJP_01973 3.6e-14
CINDINJP_01974 1.5e-55 S Psort location CytoplasmicMembrane, score
CINDINJP_01975 3.3e-146 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CINDINJP_01976 1.5e-39 2.7.7.65 T phosphorelay sensor kinase activity
CINDINJP_01977 2.7e-156 XK27_09615 S reductase
CINDINJP_01978 5.4e-67 XK27_09620 S NADPH-dependent FMN reductase
CINDINJP_01979 4.7e-96 dacA 3.4.16.4 M Belongs to the peptidase S11 family
CINDINJP_01980 1.2e-160 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
CINDINJP_01981 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CINDINJP_01982 2.1e-30 gtcA S Teichoic acid glycosylation protein
CINDINJP_01983 5e-115 rfbJ M Glycosyl transferase family 2
CINDINJP_01984 1.4e-33 S Predicted membrane protein (DUF2142)
CINDINJP_01985 3.3e-82
CINDINJP_01986 7.6e-275 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
CINDINJP_01987 1e-133 coaA 2.7.1.33 F Pantothenic acid kinase
CINDINJP_01988 6.3e-44 E GDSL-like Lipase/Acylhydrolase
CINDINJP_01989 2.3e-112 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CINDINJP_01990 1.9e-190 glnPH2 P ABC transporter permease
CINDINJP_01991 2.5e-214 yjeM E Amino Acid
CINDINJP_01992 1.8e-32 yvdC S MazG nucleotide pyrophosphohydrolase domain
CINDINJP_01993 8.1e-136 tetA EGP Major facilitator Superfamily
CINDINJP_01995 2e-69 rny D Peptidase family M23
CINDINJP_01996 9.8e-74 M transferase activity, transferring glycosyl groups
CINDINJP_01997 5.8e-57 cps3F
CINDINJP_01998 2e-160 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
CINDINJP_01999 3.7e-65 S Glycosyltransferase like family 2
CINDINJP_02000 1.6e-194 glf 5.4.99.9 M UDP-galactopyranose mutase
CINDINJP_02001 1.8e-95 M Core-2/I-Branching enzyme
CINDINJP_02002 2e-91 rfbP M Bacterial sugar transferase
CINDINJP_02003 1.8e-125 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CINDINJP_02004 1.6e-111 ywqE 3.1.3.48 GM PHP domain protein
CINDINJP_02005 9.3e-82 ywqD 2.7.10.1 D Capsular exopolysaccharide family
CINDINJP_02006 2.6e-77 epsB M biosynthesis protein
CINDINJP_02007 3.2e-214 ugd 1.1.1.22 M UDP binding domain
CINDINJP_02008 1e-42
CINDINJP_02009 3e-41 S Acyltransferase family
CINDINJP_02010 6.3e-130 S Membrane protein involved in the export of O-antigen and teichoic acid
CINDINJP_02011 3.7e-25 S Acetyltransferase (Isoleucine patch superfamily)
CINDINJP_02012 1.3e-42 M Glycosyltransferase like family 2
CINDINJP_02014 7.3e-46 S Glycosyl transferase family 2
CINDINJP_02015 3.6e-143 M Glycosyl transferase family 2
CINDINJP_02016 6.8e-47 2.3.1.79 S Hexapeptide repeat of succinyl-transferase
CINDINJP_02017 1.9e-120 G Glycosyltransferase Family 4
CINDINJP_02018 9.7e-174 rgpAc GT4 M Domain of unknown function (DUF1972)
CINDINJP_02020 1e-84 S response to antibiotic
CINDINJP_02021 9.8e-27 S zinc-ribbon domain
CINDINJP_02022 9.4e-118 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
CINDINJP_02023 9.9e-128 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CINDINJP_02024 6.2e-164 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CINDINJP_02025 4.2e-101 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
CINDINJP_02026 1.2e-144 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CINDINJP_02027 1.3e-75 S Glycosyltransferase like family 2
CINDINJP_02028 5.7e-61 S Glycosyltransferase like family 2
CINDINJP_02029 2.6e-117 cps1D M Domain of unknown function (DUF4422)
CINDINJP_02030 3e-39 S CAAX protease self-immunity
CINDINJP_02031 9.1e-89 yvyE 3.4.13.9 S YigZ family
CINDINJP_02032 2.3e-58 S Haloacid dehalogenase-like hydrolase
CINDINJP_02033 2.9e-153 EGP Major facilitator Superfamily
CINDINJP_02035 5.3e-68 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
CINDINJP_02036 1.2e-27 yraB K transcriptional regulator
CINDINJP_02037 9.8e-90 S NADPH-dependent FMN reductase
CINDINJP_02038 1e-102 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
CINDINJP_02039 1.5e-55 S ECF transporter, substrate-specific component
CINDINJP_02040 2.5e-96 znuB U ABC 3 transport family
CINDINJP_02041 1e-98 fhuC P ABC transporter
CINDINJP_02042 1e-103 psaA P Belongs to the bacterial solute-binding protein 9 family
CINDINJP_02043 7.6e-38
CINDINJP_02044 2.9e-54 XK27_01040 S Protein of unknown function (DUF1129)
CINDINJP_02045 5.4e-190 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CINDINJP_02046 3.4e-23 yyzM S Bacterial protein of unknown function (DUF951)
CINDINJP_02047 1.8e-108 spo0J K Belongs to the ParB family
CINDINJP_02048 6.5e-118 soj D Sporulation initiation inhibitor
CINDINJP_02049 1.4e-81 noc K Belongs to the ParB family
CINDINJP_02050 4e-101 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
CINDINJP_02051 1.2e-126 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
CINDINJP_02052 2.4e-109 3.1.4.46 C phosphodiesterase
CINDINJP_02053 0.0 pacL 3.6.3.8 P P-type ATPase
CINDINJP_02054 1.3e-48 C The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)