ORF_ID e_value Gene_name EC_number CAZy COGs Description
GEMLOGGD_00001 2.9e-219 calB 1.2.1.68 C Belongs to the aldehyde dehydrogenase family
GEMLOGGD_00002 1.8e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
GEMLOGGD_00003 9.1e-121 pnb C nitroreductase
GEMLOGGD_00004 2.6e-64 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
GEMLOGGD_00005 5.7e-115 S Elongation factor G-binding protein, N-terminal
GEMLOGGD_00006 0.0 nqr 1.3.5.4, 1.5.1.36 C FMN_bind
GEMLOGGD_00007 2.9e-257 P Sodium:sulfate symporter transmembrane region
GEMLOGGD_00008 2.4e-78 K LysR family
GEMLOGGD_00009 7.3e-65 K LysR family
GEMLOGGD_00010 1.1e-71 C FMN binding
GEMLOGGD_00011 3.2e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GEMLOGGD_00012 2e-163 ptlF S KR domain
GEMLOGGD_00013 7.1e-158 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
GEMLOGGD_00014 1.3e-122 drgA C Nitroreductase family
GEMLOGGD_00015 6.4e-290 QT PucR C-terminal helix-turn-helix domain
GEMLOGGD_00016 2.7e-120 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
GEMLOGGD_00017 6e-196 pva1 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GEMLOGGD_00018 1.6e-249 yjjP S Putative threonine/serine exporter
GEMLOGGD_00019 5.7e-135 wzb 3.1.3.48 T Tyrosine phosphatase family
GEMLOGGD_00020 1.4e-254 1.14.14.9 Q 4-hydroxyphenylacetate
GEMLOGGD_00021 2.9e-81 6.3.3.2 S ASCH
GEMLOGGD_00022 4.2e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
GEMLOGGD_00023 2e-169 yobV1 K WYL domain
GEMLOGGD_00024 3.6e-117 azoR C Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GEMLOGGD_00025 0.0 tetP J elongation factor G
GEMLOGGD_00026 1.2e-45 S Protein of unknown function
GEMLOGGD_00027 1.4e-62 S Protein of unknown function
GEMLOGGD_00028 2.8e-152 EG EamA-like transporter family
GEMLOGGD_00029 3.6e-93 MA20_25245 K FR47-like protein
GEMLOGGD_00030 2e-126 hchA S DJ-1/PfpI family
GEMLOGGD_00031 5.2e-184 1.1.1.1 C nadph quinone reductase
GEMLOGGD_00032 9.3e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
GEMLOGGD_00033 8.7e-235 mepA V MATE efflux family protein
GEMLOGGD_00034 1.8e-169 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
GEMLOGGD_00035 1.6e-140 S Belongs to the UPF0246 family
GEMLOGGD_00036 6e-76
GEMLOGGD_00037 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
GEMLOGGD_00038 2.4e-141
GEMLOGGD_00040 1.8e-144 2.7.7.47 H Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
GEMLOGGD_00041 4.8e-40
GEMLOGGD_00042 2.1e-129 cbiO P ABC transporter
GEMLOGGD_00043 3.1e-150 P Cobalt transport protein
GEMLOGGD_00044 4.8e-182 nikMN P PDGLE domain
GEMLOGGD_00045 4.2e-121 K Crp-like helix-turn-helix domain
GEMLOGGD_00046 1e-240 larA 5.1.2.1 S Domain of unknown function (DUF2088)
GEMLOGGD_00047 2.4e-125 larB S AIR carboxylase
GEMLOGGD_00048 6.3e-132 larC 4.99.1.12 S Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
GEMLOGGD_00049 5e-75 larC 4.99.1.12 S Protein of unknown function DUF111
GEMLOGGD_00050 1.5e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GEMLOGGD_00051 1.1e-150 larE S NAD synthase
GEMLOGGD_00052 1e-176 1.6.5.5 C Zinc-binding dehydrogenase
GEMLOGGD_00053 2e-138 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GEMLOGGD_00054 3.2e-147 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GEMLOGGD_00055 5.6e-110 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
GEMLOGGD_00056 1.3e-208 cytX U Belongs to the purine-cytosine permease (2.A.39) family
GEMLOGGD_00057 1.6e-137 S peptidase C26
GEMLOGGD_00058 7.3e-305 L HIRAN domain
GEMLOGGD_00059 3.4e-85 F NUDIX domain
GEMLOGGD_00060 2.6e-250 yifK E Amino acid permease
GEMLOGGD_00061 2.4e-122
GEMLOGGD_00062 1.1e-149 ydjP I Alpha/beta hydrolase family
GEMLOGGD_00063 0.0 pacL1 P P-type ATPase
GEMLOGGD_00064 1.6e-140 2.4.2.3 F Phosphorylase superfamily
GEMLOGGD_00065 1.6e-28 KT PspC domain
GEMLOGGD_00066 7.2e-112 S NADPH-dependent FMN reductase
GEMLOGGD_00067 1.2e-74 papX3 K Transcriptional regulator
GEMLOGGD_00068 1.7e-72 hsp1 O Belongs to the small heat shock protein (HSP20) family
GEMLOGGD_00069 8.7e-30 S Protein of unknown function (DUF3021)
GEMLOGGD_00070 1.1e-74 K LytTr DNA-binding domain
GEMLOGGD_00071 4.7e-227 mdtG EGP Major facilitator Superfamily
GEMLOGGD_00072 5e-51 cadC1 K helix_turn_helix, Arsenical Resistance Operon Repressor
GEMLOGGD_00073 8.1e-216 yeaN P Transporter, major facilitator family protein
GEMLOGGD_00075 3.4e-160 S reductase
GEMLOGGD_00076 6.2e-165 1.1.1.65 C Aldo keto reductase
GEMLOGGD_00077 1.3e-81 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase like
GEMLOGGD_00078 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
GEMLOGGD_00079 5e-52
GEMLOGGD_00080 7.5e-259
GEMLOGGD_00081 2.6e-208 C Oxidoreductase
GEMLOGGD_00082 4.9e-151 cbiQ P cobalt transport
GEMLOGGD_00083 0.0 ykoD P ABC transporter, ATP-binding protein
GEMLOGGD_00084 2.5e-98 S UPF0397 protein
GEMLOGGD_00085 1.6e-129 K UbiC transcription regulator-associated domain protein
GEMLOGGD_00086 8.3e-54 K Transcriptional regulator PadR-like family
GEMLOGGD_00087 4.6e-143
GEMLOGGD_00088 7.6e-149
GEMLOGGD_00089 9.1e-89
GEMLOGGD_00090 5.5e-144 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
GEMLOGGD_00091 2.3e-170 yjjC V ABC transporter
GEMLOGGD_00092 7.2e-300 M Exporter of polyketide antibiotics
GEMLOGGD_00093 1.6e-117 K Transcriptional regulator
GEMLOGGD_00094 2.1e-277 C Electron transfer flavoprotein FAD-binding domain
GEMLOGGD_00095 8.6e-74 folT 2.7.13.3 T ECF transporter, substrate-specific component
GEMLOGGD_00097 1.1e-92 K Bacterial regulatory proteins, tetR family
GEMLOGGD_00098 2.2e-190 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
GEMLOGGD_00099 5e-187 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
GEMLOGGD_00100 1.9e-101 dhaL 2.7.1.121 S Dak2
GEMLOGGD_00101 9e-57 dhaM 2.7.1.121 S PTS system fructose IIA component
GEMLOGGD_00102 8.6e-133 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GEMLOGGD_00103 1e-190 malR K Transcriptional regulator, LacI family
GEMLOGGD_00104 2e-180 yvdE K helix_turn _helix lactose operon repressor
GEMLOGGD_00105 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
GEMLOGGD_00106 2.1e-230 mdxE G Bacterial extracellular solute-binding protein
GEMLOGGD_00107 1.9e-226 malC P Binding-protein-dependent transport system inner membrane component
GEMLOGGD_00108 1.4e-161 malD P ABC transporter permease
GEMLOGGD_00109 1.8e-150 malA S maltodextrose utilization protein MalA
GEMLOGGD_00110 9.1e-261 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
GEMLOGGD_00111 4e-209 msmK P Belongs to the ABC transporter superfamily
GEMLOGGD_00112 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GEMLOGGD_00113 0.0 3.2.1.96 G Glycosyl hydrolase family 85
GEMLOGGD_00114 1.5e-45 ygbF S Sugar efflux transporter for intercellular exchange
GEMLOGGD_00115 5.4e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GEMLOGGD_00116 0.0 scrA 2.7.1.193, 2.7.1.211, 5.3.1.1 G phosphotransferase system
GEMLOGGD_00117 1.4e-305 scrB 3.2.1.26 GH32 G invertase
GEMLOGGD_00118 9.1e-173 scrR K Transcriptional regulator, LacI family
GEMLOGGD_00119 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
GEMLOGGD_00120 1.1e-65 3.5.1.10 C nadph quinone reductase
GEMLOGGD_00121 4e-81 3.5.1.10 C nadph quinone reductase
GEMLOGGD_00122 1.1e-217 nhaC C Na H antiporter NhaC
GEMLOGGD_00123 0.0 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
GEMLOGGD_00124 5e-165 mleR K LysR substrate binding domain
GEMLOGGD_00125 0.0 3.6.4.13 M domain protein
GEMLOGGD_00127 2.1e-157 hipB K Helix-turn-helix
GEMLOGGD_00128 0.0 oppA E ABC transporter, substratebinding protein
GEMLOGGD_00129 8.6e-309 oppA E ABC transporter, substratebinding protein
GEMLOGGD_00130 4.5e-79 yiaC K Acetyltransferase (GNAT) domain
GEMLOGGD_00131 8.8e-215 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GEMLOGGD_00132 7e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GEMLOGGD_00133 6.7e-113 pgm1 G phosphoglycerate mutase
GEMLOGGD_00134 2.9e-179 yghZ C Aldo keto reductase family protein
GEMLOGGD_00135 4.9e-34
GEMLOGGD_00136 4.8e-60 S Domain of unknown function (DU1801)
GEMLOGGD_00137 3.8e-162 FbpA K Domain of unknown function (DUF814)
GEMLOGGD_00138 1e-218 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GEMLOGGD_00140 3.5e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GEMLOGGD_00141 8.5e-50 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GEMLOGGD_00142 9.5e-262 S ATPases associated with a variety of cellular activities
GEMLOGGD_00143 2e-115 P cobalt transport
GEMLOGGD_00144 1.4e-259 P ABC transporter
GEMLOGGD_00145 3.1e-101 S ABC transporter permease
GEMLOGGD_00146 4.8e-90 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
GEMLOGGD_00147 1.4e-158 dkgB S reductase
GEMLOGGD_00148 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GEMLOGGD_00149 1e-69
GEMLOGGD_00150 7.4e-132 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GEMLOGGD_00152 3.9e-278 pipD E Dipeptidase
GEMLOGGD_00153 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
GEMLOGGD_00154 0.0 mtlR K Mga helix-turn-helix domain
GEMLOGGD_00155 1.7e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_00156 4.3e-222 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
GEMLOGGD_00157 2.1e-73
GEMLOGGD_00158 1.4e-56 trxA1 O Belongs to the thioredoxin family
GEMLOGGD_00159 1.1e-50
GEMLOGGD_00160 6.6e-96
GEMLOGGD_00161 2e-62
GEMLOGGD_00162 5e-81 ndk 2.7.4.6 F Belongs to the NDK family
GEMLOGGD_00163 7.6e-255 S Uncharacterized protein conserved in bacteria (DUF2252)
GEMLOGGD_00164 5.4e-98 yieF S NADPH-dependent FMN reductase
GEMLOGGD_00165 3.6e-123 K helix_turn_helix gluconate operon transcriptional repressor
GEMLOGGD_00166 5.1e-229 pts3C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_00167 4.7e-39
GEMLOGGD_00168 8.5e-212 S Bacterial protein of unknown function (DUF871)
GEMLOGGD_00169 2.3e-212 dho 3.5.2.3 S Amidohydrolase family
GEMLOGGD_00170 8e-202 selA 2.9.1.1 H L-seryl-tRNA selenium transferase
GEMLOGGD_00171 4.6e-129 4.1.2.14 S KDGP aldolase
GEMLOGGD_00172 4.5e-191 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
GEMLOGGD_00173 5.5e-95 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
GEMLOGGD_00174 9.8e-211 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
GEMLOGGD_00175 4.5e-166 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GEMLOGGD_00176 7.8e-159 map 3.4.11.18 E Methionine Aminopeptidase
GEMLOGGD_00177 4.3e-141 pnuC H nicotinamide mononucleotide transporter
GEMLOGGD_00178 7.3e-43 S Protein of unknown function (DUF2089)
GEMLOGGD_00179 1.7e-42
GEMLOGGD_00180 3.5e-129 treR K UTRA
GEMLOGGD_00181 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
GEMLOGGD_00182 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
GEMLOGGD_00183 0.0 pts4ABC 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
GEMLOGGD_00184 1.4e-144
GEMLOGGD_00185 6.3e-100 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
GEMLOGGD_00186 4.6e-70
GEMLOGGD_00187 1.8e-72 K Transcriptional regulator
GEMLOGGD_00188 4.3e-121 K Bacterial regulatory proteins, tetR family
GEMLOGGD_00189 6.5e-233 mntH P H( )-stimulated, divalent metal cation uptake system
GEMLOGGD_00190 1.5e-115
GEMLOGGD_00191 1.7e-40
GEMLOGGD_00192 1e-40
GEMLOGGD_00193 9.7e-253 ydiC1 EGP Major facilitator Superfamily
GEMLOGGD_00194 3.3e-65 K helix_turn_helix, mercury resistance
GEMLOGGD_00195 2.2e-249 T PhoQ Sensor
GEMLOGGD_00196 4.4e-129 K Transcriptional regulatory protein, C terminal
GEMLOGGD_00197 9.2e-49
GEMLOGGD_00198 2.1e-129 yidA K Helix-turn-helix domain, rpiR family
GEMLOGGD_00199 3e-243 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_00200 9.9e-57
GEMLOGGD_00201 2.1e-41
GEMLOGGD_00202 1.4e-184 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GEMLOGGD_00203 2.2e-257 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
GEMLOGGD_00204 1.3e-47
GEMLOGGD_00205 2.7e-123 2.7.6.5 S RelA SpoT domain protein
GEMLOGGD_00206 3.1e-104 K transcriptional regulator
GEMLOGGD_00207 0.0 ydgH S MMPL family
GEMLOGGD_00208 1e-107 tag 3.2.2.20 L glycosylase
GEMLOGGD_00209 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
GEMLOGGD_00210 2.3e-26 XK27_00720 S Leucine-rich repeat (LRR) protein
GEMLOGGD_00211 1e-188 yclI V MacB-like periplasmic core domain
GEMLOGGD_00212 7.1e-121 yclH V ABC transporter
GEMLOGGD_00213 2.5e-114 V CAAX protease self-immunity
GEMLOGGD_00214 1.2e-53 S CAAX protease self-immunity
GEMLOGGD_00215 3.4e-25 S CAAX protease self-immunity
GEMLOGGD_00216 1.6e-31 L Transposase
GEMLOGGD_00217 3.4e-66
GEMLOGGD_00218 8.7e-153 S Domain of unknown function (DUF4767)
GEMLOGGD_00219 1.9e-48
GEMLOGGD_00220 5.7e-38 S MORN repeat
GEMLOGGD_00221 0.0 XK27_09800 I Acyltransferase family
GEMLOGGD_00222 7.1e-37 S Transglycosylase associated protein
GEMLOGGD_00223 2.6e-84
GEMLOGGD_00224 7.2e-23
GEMLOGGD_00225 8.7e-72 asp S Asp23 family, cell envelope-related function
GEMLOGGD_00226 5.3e-72 asp2 S Asp23 family, cell envelope-related function
GEMLOGGD_00227 2.6e-149 Q Fumarylacetoacetate (FAA) hydrolase family
GEMLOGGD_00228 2.7e-156 yjdB S Domain of unknown function (DUF4767)
GEMLOGGD_00229 5.3e-48 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GEMLOGGD_00230 4.1e-101 G Glycogen debranching enzyme
GEMLOGGD_00231 0.0 pepN 3.4.11.2 E aminopeptidase
GEMLOGGD_00232 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
GEMLOGGD_00233 6.5e-60 hsdM 2.1.1.72 V type I restriction-modification system
GEMLOGGD_00234 2.6e-219 hsdM 2.1.1.72 V type I restriction-modification system
GEMLOGGD_00235 2.8e-09 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
GEMLOGGD_00236 1.1e-65 3.1.21.3 V Type I restriction modification DNA specificity domain
GEMLOGGD_00237 1.1e-169 L Belongs to the 'phage' integrase family
GEMLOGGD_00238 3.4e-51 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain protein
GEMLOGGD_00239 1e-90 XK27_09665 5.4.2.11 G Phosphoglycerate mutase family
GEMLOGGD_00240 0.0 nagH 2.7.13.3, 3.2.1.4, 3.2.1.52, 3.2.1.78, 3.2.1.8 GH20,GH26,GH5,GH9 M MucBP domain
GEMLOGGD_00242 3.5e-88 S AAA domain
GEMLOGGD_00243 4.5e-140 K sequence-specific DNA binding
GEMLOGGD_00244 2.3e-96 K Helix-turn-helix domain
GEMLOGGD_00245 6.1e-171 K Transcriptional regulator
GEMLOGGD_00246 0.0 1.3.5.4 C FMN_bind
GEMLOGGD_00248 2.3e-81 rmaD K Transcriptional regulator
GEMLOGGD_00249 4.2e-115 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GEMLOGGD_00250 1.1e-253 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GEMLOGGD_00251 9.9e-199 asnA 6.3.1.1 F aspartate--ammonia ligase
GEMLOGGD_00252 7.4e-277 pipD E Dipeptidase
GEMLOGGD_00253 1.7e-221 2.7.7.7, 3.6.4.12 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GEMLOGGD_00254 8.5e-41
GEMLOGGD_00255 4.1e-32 L leucine-zipper of insertion element IS481
GEMLOGGD_00256 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GEMLOGGD_00257 2.9e-162 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GEMLOGGD_00258 1.5e-50 K helix_turn_helix, Arsenical Resistance Operon Repressor
GEMLOGGD_00259 1.3e-137 S NADPH-dependent FMN reductase
GEMLOGGD_00260 2.3e-179
GEMLOGGD_00261 1.9e-220 yibE S overlaps another CDS with the same product name
GEMLOGGD_00262 1.3e-126 yibF S overlaps another CDS with the same product name
GEMLOGGD_00263 2.6e-103 3.2.2.20 K FR47-like protein
GEMLOGGD_00264 5e-122 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GEMLOGGD_00265 5.6e-49
GEMLOGGD_00266 1.3e-190 nlhH_1 I alpha/beta hydrolase fold
GEMLOGGD_00267 1.5e-253 xylP2 G symporter
GEMLOGGD_00268 5.2e-281 murE 6.3.2.10, 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GEMLOGGD_00269 1.6e-219 dapG 1.1.1.3, 2.7.2.4 E Amino acid kinase family
GEMLOGGD_00270 0.0 asnB 6.3.5.4 E Asparagine synthase
GEMLOGGD_00271 7.2e-50 azlD S Branched-chain amino acid transport protein (AzlD)
GEMLOGGD_00272 1.3e-120 azlC E branched-chain amino acid
GEMLOGGD_00273 4.4e-35 yyaN K MerR HTH family regulatory protein
GEMLOGGD_00274 3.8e-106
GEMLOGGD_00275 1.4e-117 S Domain of unknown function (DUF4811)
GEMLOGGD_00276 7e-270 lmrB EGP Major facilitator Superfamily
GEMLOGGD_00277 1.7e-84 merR K MerR HTH family regulatory protein
GEMLOGGD_00278 2.6e-58
GEMLOGGD_00279 2e-120 sirR K iron dependent repressor
GEMLOGGD_00280 6e-31 cspC K Cold shock protein
GEMLOGGD_00281 1.5e-130 thrE S Putative threonine/serine exporter
GEMLOGGD_00282 2.2e-76 S Threonine/Serine exporter, ThrE
GEMLOGGD_00283 1.5e-189 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GEMLOGGD_00284 2.3e-119 lssY 3.6.1.27 I phosphatase
GEMLOGGD_00285 2e-154 I alpha/beta hydrolase fold
GEMLOGGD_00286 2.8e-99 2.3.1.128 J Acetyltransferase (GNAT) domain
GEMLOGGD_00287 4.2e-92 K Transcriptional regulator
GEMLOGGD_00288 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
GEMLOGGD_00289 1.5e-264 lysP E amino acid
GEMLOGGD_00290 2.5e-114 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
GEMLOGGD_00291 2.5e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GEMLOGGD_00292 4.1e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GEMLOGGD_00300 6.9e-78 ctsR K Belongs to the CtsR family
GEMLOGGD_00301 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GEMLOGGD_00302 7.4e-109 K Bacterial regulatory proteins, tetR family
GEMLOGGD_00303 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GEMLOGGD_00304 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GEMLOGGD_00305 7.8e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
GEMLOGGD_00306 3.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GEMLOGGD_00307 5.5e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GEMLOGGD_00308 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GEMLOGGD_00309 2.6e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GEMLOGGD_00310 4.4e-112 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GEMLOGGD_00311 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
GEMLOGGD_00312 1.8e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GEMLOGGD_00313 8.1e-146 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GEMLOGGD_00314 8.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GEMLOGGD_00315 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GEMLOGGD_00316 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GEMLOGGD_00317 9.2e-77 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GEMLOGGD_00318 1.4e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
GEMLOGGD_00319 2.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GEMLOGGD_00320 4.3e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GEMLOGGD_00321 2.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GEMLOGGD_00322 3.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GEMLOGGD_00323 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GEMLOGGD_00324 3.5e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GEMLOGGD_00325 3.3e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GEMLOGGD_00326 6.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GEMLOGGD_00327 2.2e-24 rpmD J Ribosomal protein L30
GEMLOGGD_00328 6.3e-70 rplO J Binds to the 23S rRNA
GEMLOGGD_00329 1.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GEMLOGGD_00330 2.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GEMLOGGD_00331 3.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GEMLOGGD_00332 1.1e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GEMLOGGD_00333 3.4e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GEMLOGGD_00334 5.7e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GEMLOGGD_00335 2.1e-61 rplQ J Ribosomal protein L17
GEMLOGGD_00336 1.4e-181 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GEMLOGGD_00337 1.7e-94 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
GEMLOGGD_00338 1.4e-86 ynhH S NusG domain II
GEMLOGGD_00339 0.0 ndh 1.6.99.3 C NADH dehydrogenase
GEMLOGGD_00340 3.5e-142 cad S FMN_bind
GEMLOGGD_00341 1.5e-208 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GEMLOGGD_00342 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GEMLOGGD_00343 8.2e-165 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GEMLOGGD_00344 4.7e-143 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GEMLOGGD_00345 3.9e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GEMLOGGD_00346 1.3e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GEMLOGGD_00347 1.9e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
GEMLOGGD_00348 4e-164 degV S Uncharacterised protein, DegV family COG1307
GEMLOGGD_00349 1.7e-183 ywhK S Membrane
GEMLOGGD_00350 4.2e-203 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
GEMLOGGD_00351 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GEMLOGGD_00352 8.3e-165 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GEMLOGGD_00353 1.8e-184 aroF 2.5.1.54 E DAHP synthetase I family
GEMLOGGD_00354 4.9e-196 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GEMLOGGD_00355 4.7e-263 P Sodium:sulfate symporter transmembrane region
GEMLOGGD_00356 4.1e-53 yitW S Iron-sulfur cluster assembly protein
GEMLOGGD_00357 5.4e-115 ttdB 4.2.1.2, 4.2.1.32 C Catalyzes the reversible hydration of fumarate to (S)- malate
GEMLOGGD_00358 2.2e-176 ttdA 4.2.1.32 C Fumarate hydratase (Fumerase)
GEMLOGGD_00359 1.7e-198 K Helix-turn-helix domain
GEMLOGGD_00360 2.4e-153 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
GEMLOGGD_00361 4.5e-132 mntB 3.6.3.35 P ABC transporter
GEMLOGGD_00362 4.8e-141 mtsB U ABC 3 transport family
GEMLOGGD_00363 2.3e-173 sitA P Belongs to the bacterial solute-binding protein 9 family
GEMLOGGD_00364 3.1e-50
GEMLOGGD_00365 1.2e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GEMLOGGD_00366 2.2e-260 citP P Sodium:sulfate symporter transmembrane region
GEMLOGGD_00367 2.9e-179 citR K sugar-binding domain protein
GEMLOGGD_00368 5.1e-207 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
GEMLOGGD_00369 4.8e-188 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
GEMLOGGD_00370 9e-44 citD C Covalent carrier of the coenzyme of citrate lyase
GEMLOGGD_00371 5.5e-164 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
GEMLOGGD_00372 4.6e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
GEMLOGGD_00374 6.4e-257 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GEMLOGGD_00375 2.7e-263 frdC 1.3.5.4 C FAD binding domain
GEMLOGGD_00376 1.2e-94 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
GEMLOGGD_00377 1.6e-160 mleR K LysR family transcriptional regulator
GEMLOGGD_00378 1.8e-167 mleR K LysR family
GEMLOGGD_00379 4.2e-308 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
GEMLOGGD_00380 1.4e-165 mleP S Sodium Bile acid symporter family
GEMLOGGD_00381 5.8e-253 yfnA E Amino Acid
GEMLOGGD_00382 3e-99 S ECF transporter, substrate-specific component
GEMLOGGD_00383 2.2e-24
GEMLOGGD_00384 0.0 S Alpha beta
GEMLOGGD_00385 5.4e-275 cydA 1.10.3.14 C ubiquinol oxidase
GEMLOGGD_00386 2.6e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
GEMLOGGD_00387 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GEMLOGGD_00388 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GEMLOGGD_00389 1.5e-156 ddpX 3.4.13.22 S L,D-transpeptidase catalytic domain
GEMLOGGD_00390 2.3e-182 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GEMLOGGD_00391 2.9e-165 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GEMLOGGD_00392 8.7e-184 S Oxidoreductase family, NAD-binding Rossmann fold
GEMLOGGD_00393 1.3e-111 acmA 3.2.1.17 NU mannosyl-glycoprotein
GEMLOGGD_00394 9.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GEMLOGGD_00395 1e-93 S UPF0316 protein
GEMLOGGD_00396 1.3e-218 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GEMLOGGD_00397 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GEMLOGGD_00398 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GEMLOGGD_00399 2.6e-198 camS S sex pheromone
GEMLOGGD_00400 3.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GEMLOGGD_00401 2.5e-275 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GEMLOGGD_00402 7.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GEMLOGGD_00403 1e-190 yegS 2.7.1.107 G Lipid kinase
GEMLOGGD_00404 4e-259 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GEMLOGGD_00405 2.1e-100 yobS K Bacterial regulatory proteins, tetR family
GEMLOGGD_00406 0.0 yfgQ P E1-E2 ATPase
GEMLOGGD_00407 4e-240 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_00408 6.1e-168 S Alpha/beta hydrolase of unknown function (DUF915)
GEMLOGGD_00409 1.9e-150 gntR K rpiR family
GEMLOGGD_00410 1.2e-143 lys M Glycosyl hydrolases family 25
GEMLOGGD_00411 1.1e-62 S Domain of unknown function (DUF4828)
GEMLOGGD_00412 2.7e-31 cspA K 'Cold-shock' DNA-binding domain
GEMLOGGD_00413 5.4e-189 mocA S Oxidoreductase
GEMLOGGD_00414 2.6e-239 yfmL 3.6.4.13 L DEAD DEAH box helicase
GEMLOGGD_00416 2.3e-75 T Universal stress protein family
GEMLOGGD_00417 1e-243 pts14C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_00418 6.8e-164 S Alpha/beta hydrolase of unknown function (DUF915)
GEMLOGGD_00420 1.3e-73
GEMLOGGD_00421 5e-107
GEMLOGGD_00422 7.6e-255 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GEMLOGGD_00423 5.3e-220 pbpX1 V Beta-lactamase
GEMLOGGD_00424 6.8e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GEMLOGGD_00425 3.3e-156 yihY S Belongs to the UPF0761 family
GEMLOGGD_00426 9.7e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GEMLOGGD_00427 7.6e-216 glf 5.4.99.9 M UDP-galactopyranose mutase
GEMLOGGD_00428 5.4e-17 wcoI 2.7.10.1, 2.7.10.2 M biosynthesis protein
GEMLOGGD_00429 1.5e-08 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GEMLOGGD_00430 3e-10 pbpX2 V Beta-lactamase
GEMLOGGD_00431 1.4e-24
GEMLOGGD_00432 3.5e-79 cps1D M Domain of unknown function (DUF4422)
GEMLOGGD_00433 1.4e-94 waaB GT4 M Glycosyl transferases group 1
GEMLOGGD_00434 5.6e-54 tagB 2.7.8.12 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GEMLOGGD_00435 7.9e-59 1.1.1.133 S Glycosyltransferase like family 2
GEMLOGGD_00436 2.6e-173 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
GEMLOGGD_00437 2.4e-63 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
GEMLOGGD_00438 1.5e-100 M Parallel beta-helix repeats
GEMLOGGD_00439 8.5e-182 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GEMLOGGD_00440 3.3e-101 L Integrase
GEMLOGGD_00441 5.7e-130 epsB M biosynthesis protein
GEMLOGGD_00442 7.3e-127 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GEMLOGGD_00443 2e-143 ywqE 3.1.3.48 GM PHP domain protein
GEMLOGGD_00444 3.8e-176 cps2D 5.1.3.2 M RmlD substrate binding domain
GEMLOGGD_00445 2.4e-124 tuaA M Bacterial sugar transferase
GEMLOGGD_00446 1.3e-132 cps4F 2.4.1.306 GT4 M Glycosyl transferases group 1
GEMLOGGD_00447 8.7e-126 cps4G M Glycosyltransferase Family 4
GEMLOGGD_00448 1.2e-172
GEMLOGGD_00449 5.8e-132 cps4I M Glycosyltransferase like family 2
GEMLOGGD_00450 9.9e-48 epsI GM Exopolysaccharide biosynthesis protein
GEMLOGGD_00451 3.2e-83 cps2J S Polysaccharide biosynthesis protein
GEMLOGGD_00452 1.3e-20 relB L bacterial-type proximal promoter sequence-specific DNA binding
GEMLOGGD_00453 2.2e-26 M domain protein
GEMLOGGD_00454 2.5e-83 M domain protein
GEMLOGGD_00455 1.9e-19 M domain protein
GEMLOGGD_00456 1.6e-75 M self proteolysis
GEMLOGGD_00457 2.4e-43
GEMLOGGD_00459 2.1e-120
GEMLOGGD_00460 1.4e-35
GEMLOGGD_00461 1.1e-30
GEMLOGGD_00462 1.2e-134
GEMLOGGD_00463 4.4e-112
GEMLOGGD_00464 1e-10
GEMLOGGD_00465 5e-151 L Transposase and inactivated derivatives, IS30 family
GEMLOGGD_00466 1.5e-15
GEMLOGGD_00467 2.6e-85
GEMLOGGD_00469 5.5e-55 S Immunity protein 63
GEMLOGGD_00470 7.2e-28 S Barstar (barnase inhibitor)
GEMLOGGD_00471 3.9e-170 cps3A S Glycosyltransferase like family 2
GEMLOGGD_00472 3.7e-176 cps3B S Glycosyltransferase like family 2
GEMLOGGD_00473 4.2e-222 glf 5.4.99.9 M UDP-galactopyranose mutase
GEMLOGGD_00474 1.4e-203 cps3D
GEMLOGGD_00475 4.8e-111 cps3E
GEMLOGGD_00476 2.7e-163 cps3F
GEMLOGGD_00477 1.3e-207 cps3H
GEMLOGGD_00478 4.9e-204 cps3I G Acyltransferase family
GEMLOGGD_00479 4e-147 cps1D M Domain of unknown function (DUF4422)
GEMLOGGD_00480 4.7e-137 K helix_turn_helix, arabinose operon control protein
GEMLOGGD_00481 0.0 M Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
GEMLOGGD_00482 9.6e-74 K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_00483 1.1e-259 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
GEMLOGGD_00484 3.2e-121 rfbP M Bacterial sugar transferase
GEMLOGGD_00485 3.8e-53
GEMLOGGD_00486 7.3e-33 S Protein of unknown function (DUF2922)
GEMLOGGD_00487 7e-30
GEMLOGGD_00488 6.2e-25
GEMLOGGD_00489 1.5e-100 K DNA-templated transcription, initiation
GEMLOGGD_00490 1.1e-124
GEMLOGGD_00491 2.2e-140 recX 2.4.1.337 GT4 S Regulatory protein RecX
GEMLOGGD_00492 4.1e-106 ygaC J Belongs to the UPF0374 family
GEMLOGGD_00493 1.5e-133 cwlO M NlpC/P60 family
GEMLOGGD_00494 7.8e-48 K sequence-specific DNA binding
GEMLOGGD_00495 1.3e-27 S Antitoxin component of a toxin-antitoxin (TA) module
GEMLOGGD_00496 4.2e-145 pbpX V Beta-lactamase
GEMLOGGD_00497 1.3e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GEMLOGGD_00498 9.3e-188 yueF S AI-2E family transporter
GEMLOGGD_00499 3.7e-72 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
GEMLOGGD_00500 9.5e-213 gntP EG Gluconate
GEMLOGGD_00501 6.7e-292 gntK 2.7.1.12, 2.7.1.16, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
GEMLOGGD_00502 1.7e-170 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
GEMLOGGD_00503 9.8e-255 gor 1.8.1.7 C Glutathione reductase
GEMLOGGD_00504 6.9e-308 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GEMLOGGD_00505 4.8e-279
GEMLOGGD_00506 6.5e-198 M MucBP domain
GEMLOGGD_00507 7.1e-161 lysR5 K LysR substrate binding domain
GEMLOGGD_00508 5.5e-126 yxaA S membrane transporter protein
GEMLOGGD_00509 3.2e-57 ywjH S Protein of unknown function (DUF1634)
GEMLOGGD_00510 1.3e-309 oppA E ABC transporter, substratebinding protein
GEMLOGGD_00511 2.3e-165 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
GEMLOGGD_00512 1.1e-189 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
GEMLOGGD_00513 9.2e-203 oppD P Belongs to the ABC transporter superfamily
GEMLOGGD_00514 1.8e-181 oppF P Belongs to the ABC transporter superfamily
GEMLOGGD_00515 1e-63 K Winged helix DNA-binding domain
GEMLOGGD_00516 1.6e-102 L Integrase
GEMLOGGD_00517 0.0 clpE O Belongs to the ClpA ClpB family
GEMLOGGD_00518 6.5e-30
GEMLOGGD_00519 2.7e-39 ptsH G phosphocarrier protein HPR
GEMLOGGD_00520 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GEMLOGGD_00521 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
GEMLOGGD_00522 6.9e-200 cpoA GT4 M Glycosyltransferase, group 1 family protein
GEMLOGGD_00523 7.4e-189 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GEMLOGGD_00524 1.9e-228 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GEMLOGGD_00525 1.8e-228 patA 2.6.1.1 E Aminotransferase
GEMLOGGD_00526 1.1e-34 ykuJ S Protein of unknown function (DUF1797)
GEMLOGGD_00527 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GEMLOGGD_00533 5.1e-08
GEMLOGGD_00539 2.8e-91 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
GEMLOGGD_00540 2e-181 P secondary active sulfate transmembrane transporter activity
GEMLOGGD_00541 1.4e-95
GEMLOGGD_00542 2e-94 K Acetyltransferase (GNAT) domain
GEMLOGGD_00543 2.9e-156 T Calcineurin-like phosphoesterase superfamily domain
GEMLOGGD_00545 1.3e-230 mntH P H( )-stimulated, divalent metal cation uptake system
GEMLOGGD_00546 4.4e-188 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
GEMLOGGD_00547 6.6e-254 mmuP E amino acid
GEMLOGGD_00548 4.9e-168 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
GEMLOGGD_00549 1.5e-291 tagE1 2.4.1.52 GT4 M Glycosyl transferases group 1
GEMLOGGD_00550 3.1e-122
GEMLOGGD_00551 4.1e-212 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GEMLOGGD_00552 1.4e-278 bmr3 EGP Major facilitator Superfamily
GEMLOGGD_00553 4.4e-139 N Cell shape-determining protein MreB
GEMLOGGD_00554 0.0 S Pfam Methyltransferase
GEMLOGGD_00555 1.8e-268 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
GEMLOGGD_00556 2.4e-297 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
GEMLOGGD_00557 7.2e-29
GEMLOGGD_00558 1e-93 ytqB 2.1.1.176 J Putative rRNA methylase
GEMLOGGD_00559 6.7e-124 3.6.1.27 I Acid phosphatase homologues
GEMLOGGD_00560 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GEMLOGGD_00561 3e-301 ytgP S Polysaccharide biosynthesis protein
GEMLOGGD_00562 1.8e-136 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GEMLOGGD_00563 6.4e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GEMLOGGD_00564 1.5e-272 pepV 3.5.1.18 E dipeptidase PepV
GEMLOGGD_00565 4.1e-84 uspA T Belongs to the universal stress protein A family
GEMLOGGD_00566 1.8e-201 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
GEMLOGGD_00567 6.8e-173 ugpA U Binding-protein-dependent transport system inner membrane component
GEMLOGGD_00568 1.1e-150 ugpE G ABC transporter permease
GEMLOGGD_00569 2.3e-108 ugpB G Bacterial extracellular solute-binding protein
GEMLOGGD_00570 5.9e-140 ugpB G Bacterial extracellular solute-binding protein
GEMLOGGD_00571 9.9e-126 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GEMLOGGD_00572 3.8e-119 dck 2.7.1.74 F deoxynucleoside kinase
GEMLOGGD_00573 5.5e-41 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GEMLOGGD_00574 1.8e-179 XK27_06930 V domain protein
GEMLOGGD_00576 2.5e-127 V Transport permease protein
GEMLOGGD_00577 2.3e-156 V ABC transporter
GEMLOGGD_00578 1.3e-174 K LytTr DNA-binding domain
GEMLOGGD_00579 9.1e-155 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GEMLOGGD_00580 1.6e-64 K helix_turn_helix, mercury resistance
GEMLOGGD_00581 3.5e-117 GM NAD(P)H-binding
GEMLOGGD_00582 1.2e-158 ypaH EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
GEMLOGGD_00583 7.6e-149 S Sucrose-6F-phosphate phosphohydrolase
GEMLOGGD_00584 1.7e-108
GEMLOGGD_00585 2.2e-224 pltK 2.7.13.3 T GHKL domain
GEMLOGGD_00586 1.6e-137 pltR K LytTr DNA-binding domain
GEMLOGGD_00587 4.5e-55
GEMLOGGD_00588 2.5e-59
GEMLOGGD_00589 1.9e-113 S CAAX protease self-immunity
GEMLOGGD_00590 1.6e-85 ohrR K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_00591 1.9e-89
GEMLOGGD_00592 2.5e-46
GEMLOGGD_00593 0.0 uvrA2 L ABC transporter
GEMLOGGD_00595 2.6e-211 L Belongs to the 'phage' integrase family
GEMLOGGD_00602 1.5e-36 S Pfam:Peptidase_M78
GEMLOGGD_00603 8e-25 ps115 K Helix-turn-helix XRE-family like proteins
GEMLOGGD_00605 1.3e-62 S ORF6C domain
GEMLOGGD_00607 1.3e-06
GEMLOGGD_00608 8.9e-56 S Domain of unknown function (DUF771)
GEMLOGGD_00613 4.6e-131 S Putative HNHc nuclease
GEMLOGGD_00614 3.6e-71 L DnaD domain protein
GEMLOGGD_00615 2.4e-144 pi346 L IstB-like ATP binding protein
GEMLOGGD_00617 3e-45
GEMLOGGD_00618 4.1e-17
GEMLOGGD_00619 8.2e-26 S YopX protein
GEMLOGGD_00621 1.4e-17
GEMLOGGD_00622 4.3e-64 S Transcriptional regulator, RinA family
GEMLOGGD_00624 8.6e-13
GEMLOGGD_00625 6.4e-69 L HNH nucleases
GEMLOGGD_00626 5.2e-29 S HNH endonuclease
GEMLOGGD_00627 4.7e-79 L Phage terminase, small subunit
GEMLOGGD_00628 0.0 S Phage Terminase
GEMLOGGD_00629 1.1e-24 S Protein of unknown function (DUF1056)
GEMLOGGD_00630 6.2e-224 S Phage portal protein
GEMLOGGD_00631 8.4e-126 S Clp protease
GEMLOGGD_00632 2.6e-209 S Phage capsid family
GEMLOGGD_00633 3.6e-52 S Phage gp6-like head-tail connector protein
GEMLOGGD_00634 1.4e-25 S Phage head-tail joining protein
GEMLOGGD_00635 9.1e-40
GEMLOGGD_00636 5.9e-27
GEMLOGGD_00637 1e-71 S Phage tail tube protein
GEMLOGGD_00640 0.0 S peptidoglycan catabolic process
GEMLOGGD_00641 1.3e-225 S Phage tail protein
GEMLOGGD_00642 2.9e-169 S Phage minor structural protein
GEMLOGGD_00643 1.2e-105 S Phage minor structural protein
GEMLOGGD_00644 2.4e-160
GEMLOGGD_00647 4.5e-53
GEMLOGGD_00648 3.1e-176 3.5.1.28 M Glycosyl hydrolases family 25
GEMLOGGD_00649 3.3e-37 S Haemolysin XhlA
GEMLOGGD_00652 5.9e-52
GEMLOGGD_00653 3.5e-10
GEMLOGGD_00654 2.1e-180
GEMLOGGD_00655 1.9e-89 gtcA S Teichoic acid glycosylation protein
GEMLOGGD_00656 3.6e-58 S Protein of unknown function (DUF1516)
GEMLOGGD_00657 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
GEMLOGGD_00658 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GEMLOGGD_00659 1.4e-306 S Protein conserved in bacteria
GEMLOGGD_00660 1.3e-229 sat 2.7.7.4 H the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms
GEMLOGGD_00661 2.5e-112 cysC 2.7.1.25, 2.7.7.4 F Catalyzes the synthesis of activated sulfate
GEMLOGGD_00662 1.5e-175 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain
GEMLOGGD_00663 3.9e-304 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
GEMLOGGD_00664 0.0 yfbS P Sodium:sulfate symporter transmembrane region
GEMLOGGD_00665 2.1e-244 dinF V MatE
GEMLOGGD_00666 1.9e-31
GEMLOGGD_00669 7.7e-79 elaA S Acetyltransferase (GNAT) domain
GEMLOGGD_00670 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GEMLOGGD_00671 1.4e-81
GEMLOGGD_00672 0.0 yhcA V MacB-like periplasmic core domain
GEMLOGGD_00673 7.6e-107
GEMLOGGD_00674 0.0 K PRD domain
GEMLOGGD_00675 5.9e-61 S Domain of unknown function (DUF3284)
GEMLOGGD_00676 1.4e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GEMLOGGD_00677 1.1e-47 pts15B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GEMLOGGD_00678 1.6e-244 pts15C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_00679 1.3e-287 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_00680 1.8e-32 EGP Major facilitator Superfamily
GEMLOGGD_00681 1.9e-158 EGP Major facilitator Superfamily
GEMLOGGD_00682 2e-114 M ErfK YbiS YcfS YnhG
GEMLOGGD_00683 4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GEMLOGGD_00684 8.4e-284 ydfD K Alanine-glyoxylate amino-transferase
GEMLOGGD_00685 1.4e-102 argO S LysE type translocator
GEMLOGGD_00686 3.2e-214 arcT 2.6.1.1 E Aminotransferase
GEMLOGGD_00687 4.4e-77 argR K Regulates arginine biosynthesis genes
GEMLOGGD_00688 2.9e-12
GEMLOGGD_00689 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GEMLOGGD_00690 1e-54 yheA S Belongs to the UPF0342 family
GEMLOGGD_00691 5.7e-233 yhaO L Ser Thr phosphatase family protein
GEMLOGGD_00692 0.0 L AAA domain
GEMLOGGD_00693 2.9e-187 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
GEMLOGGD_00694 8.7e-215
GEMLOGGD_00695 5.2e-181 3.4.21.102 M Peptidase family S41
GEMLOGGD_00696 1.2e-177 K LysR substrate binding domain
GEMLOGGD_00697 2.1e-111 1.3.5.4 S NADPH-dependent FMN reductase
GEMLOGGD_00698 0.0 1.3.5.4 C FAD binding domain
GEMLOGGD_00699 4.2e-98
GEMLOGGD_00700 6e-76 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
GEMLOGGD_00701 1.9e-160 T PhoQ Sensor
GEMLOGGD_00702 4.8e-104 K Transcriptional regulatory protein, C terminal
GEMLOGGD_00703 2.2e-61 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatase
GEMLOGGD_00704 2.6e-132 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
GEMLOGGD_00705 1.3e-79 dedA S SNARE-like domain protein
GEMLOGGD_00706 1.8e-184 ykoT GT2 M Glycosyl transferase family 2
GEMLOGGD_00707 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GEMLOGGD_00708 3.9e-69 S NUDIX domain
GEMLOGGD_00709 0.0 S membrane
GEMLOGGD_00710 1.1e-171 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GEMLOGGD_00711 1.8e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
GEMLOGGD_00712 3.1e-223 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
GEMLOGGD_00713 1.4e-81 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
GEMLOGGD_00714 9.3e-106 GBS0088 S Nucleotidyltransferase
GEMLOGGD_00715 1.4e-106
GEMLOGGD_00716 5.1e-116 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
GEMLOGGD_00717 3.3e-112 K Bacterial regulatory proteins, tetR family
GEMLOGGD_00718 9.4e-242 npr 1.11.1.1 C NADH oxidase
GEMLOGGD_00719 0.0
GEMLOGGD_00720 7.9e-61
GEMLOGGD_00721 1.4e-192 S Fn3-like domain
GEMLOGGD_00722 3.4e-102 S WxL domain surface cell wall-binding
GEMLOGGD_00723 3.5e-78 S WxL domain surface cell wall-binding
GEMLOGGD_00724 3.3e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GEMLOGGD_00725 3.5e-39
GEMLOGGD_00726 9.9e-82 hit FG histidine triad
GEMLOGGD_00727 1.6e-134 ecsA V ABC transporter, ATP-binding protein
GEMLOGGD_00728 4.8e-224 ecsB U ABC transporter
GEMLOGGD_00729 3.2e-152 ytmP 2.7.1.89 M Choline/ethanolamine kinase
GEMLOGGD_00730 9e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GEMLOGGD_00731 1.6e-54 ytzB S Peptidase propeptide and YPEB domain
GEMLOGGD_00732 5.3e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GEMLOGGD_00733 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
GEMLOGGD_00734 1.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GEMLOGGD_00735 7.9e-21 S Virus attachment protein p12 family
GEMLOGGD_00736 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
GEMLOGGD_00737 1.3e-34 feoA P FeoA domain
GEMLOGGD_00738 4.2e-144 sufC O FeS assembly ATPase SufC
GEMLOGGD_00739 2.9e-243 sufD O FeS assembly protein SufD
GEMLOGGD_00740 8.9e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GEMLOGGD_00741 7.1e-83 nifU C SUF system FeS assembly protein, NifU family
GEMLOGGD_00742 1.4e-272 sufB O assembly protein SufB
GEMLOGGD_00743 5.5e-45 yitW S Iron-sulfur cluster assembly protein
GEMLOGGD_00744 2.3e-111 hipB K Helix-turn-helix
GEMLOGGD_00745 4.5e-121 ybhL S Belongs to the BI1 family
GEMLOGGD_00746 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GEMLOGGD_00747 1.5e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GEMLOGGD_00748 7.8e-103 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GEMLOGGD_00749 4.6e-91 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GEMLOGGD_00750 2.5e-248 dnaB L replication initiation and membrane attachment
GEMLOGGD_00751 3.3e-172 dnaI L Primosomal protein DnaI
GEMLOGGD_00752 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GEMLOGGD_00753 1.8e-84 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GEMLOGGD_00754 1.9e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GEMLOGGD_00755 7.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GEMLOGGD_00756 9.9e-57
GEMLOGGD_00757 9.4e-239 yrvN L AAA C-terminal domain
GEMLOGGD_00758 4.3e-130 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GEMLOGGD_00759 1e-62 hxlR K Transcriptional regulator, HxlR family
GEMLOGGD_00760 1.5e-135 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
GEMLOGGD_00761 1e-248 pgaC GT2 M Glycosyl transferase
GEMLOGGD_00762 2.9e-79
GEMLOGGD_00763 1.4e-98 yqeG S HAD phosphatase, family IIIA
GEMLOGGD_00764 4.5e-216 yqeH S Ribosome biogenesis GTPase YqeH
GEMLOGGD_00765 1.1e-50 yhbY J RNA-binding protein
GEMLOGGD_00766 1.4e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GEMLOGGD_00767 3.2e-115 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
GEMLOGGD_00768 2.1e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GEMLOGGD_00769 5.8e-140 yqeM Q Methyltransferase
GEMLOGGD_00770 4.9e-218 ylbM S Belongs to the UPF0348 family
GEMLOGGD_00771 1.6e-97 yceD S Uncharacterized ACR, COG1399
GEMLOGGD_00772 2.2e-89 S Peptidase propeptide and YPEB domain
GEMLOGGD_00773 1e-168 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GEMLOGGD_00774 3e-273 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GEMLOGGD_00775 4.2e-245 rarA L recombination factor protein RarA
GEMLOGGD_00776 4.3e-121 K response regulator
GEMLOGGD_00777 5.2e-306 arlS 2.7.13.3 T Histidine kinase
GEMLOGGD_00778 5.8e-172 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GEMLOGGD_00779 0.0 sbcC L Putative exonuclease SbcCD, C subunit
GEMLOGGD_00780 4.5e-227 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
GEMLOGGD_00781 3.9e-99 S SdpI/YhfL protein family
GEMLOGGD_00782 1e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GEMLOGGD_00783 6.4e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GEMLOGGD_00784 7.9e-140 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GEMLOGGD_00785 1.3e-93 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GEMLOGGD_00786 7.4e-64 yodB K Transcriptional regulator, HxlR family
GEMLOGGD_00787 4.9e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GEMLOGGD_00788 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GEMLOGGD_00789 6.6e-186 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GEMLOGGD_00790 2.6e-112 udk 2.7.1.48 F Cytidine monophosphokinase
GEMLOGGD_00791 6.8e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GEMLOGGD_00792 2.3e-96 liaI S membrane
GEMLOGGD_00793 4e-75 XK27_02470 K LytTr DNA-binding domain
GEMLOGGD_00794 1.5e-54 yneR S Belongs to the HesB IscA family
GEMLOGGD_00795 0.0 S membrane
GEMLOGGD_00796 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
GEMLOGGD_00797 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GEMLOGGD_00798 6.3e-102 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GEMLOGGD_00799 1.3e-114 gluP 3.4.21.105 S Peptidase, S54 family
GEMLOGGD_00800 1.4e-33 yqgQ S Bacterial protein of unknown function (DUF910)
GEMLOGGD_00801 5.7e-180 glk 2.7.1.2 G Glucokinase
GEMLOGGD_00802 1.4e-110 pepE 3.4.13.21 E Belongs to the peptidase S51 family
GEMLOGGD_00803 1.7e-67 yqhL P Rhodanese-like protein
GEMLOGGD_00804 6.9e-23 WQ51_02665 S Protein of unknown function (DUF3042)
GEMLOGGD_00805 1.1e-138 glpQ 3.1.4.46 C phosphodiesterase
GEMLOGGD_00806 1.2e-174 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GEMLOGGD_00807 4.6e-64 glnR K Transcriptional regulator
GEMLOGGD_00808 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
GEMLOGGD_00809 6.9e-162
GEMLOGGD_00810 4e-181
GEMLOGGD_00811 6.2e-99 dut S Protein conserved in bacteria
GEMLOGGD_00812 5.3e-56
GEMLOGGD_00813 1.7e-30
GEMLOGGD_00816 5.4e-19
GEMLOGGD_00817 1.8e-89 K Transcriptional regulator
GEMLOGGD_00818 7.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
GEMLOGGD_00819 3.2e-53 ysxB J Cysteine protease Prp
GEMLOGGD_00820 5.4e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GEMLOGGD_00821 1.6e-194 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GEMLOGGD_00822 2.2e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GEMLOGGD_00823 3.5e-74 yqhY S Asp23 family, cell envelope-related function
GEMLOGGD_00824 5.8e-68 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GEMLOGGD_00825 2.2e-151 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GEMLOGGD_00826 1.6e-244 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GEMLOGGD_00827 4.3e-33 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GEMLOGGD_00828 3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GEMLOGGD_00829 4e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GEMLOGGD_00830 7.4e-77 argR K Regulates arginine biosynthesis genes
GEMLOGGD_00831 6.3e-307 recN L May be involved in recombinational repair of damaged DNA
GEMLOGGD_00832 5.7e-222 opuCA 3.6.3.32 E ABC transporter, ATP-binding protein
GEMLOGGD_00833 1.2e-104 opuCB E ABC transporter permease
GEMLOGGD_00834 6e-174 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GEMLOGGD_00835 4.9e-106 opuCD P Binding-protein-dependent transport system inner membrane component
GEMLOGGD_00836 1.7e-54
GEMLOGGD_00837 3.3e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
GEMLOGGD_00838 2.4e-30 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GEMLOGGD_00839 4e-218 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GEMLOGGD_00840 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GEMLOGGD_00841 4.2e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GEMLOGGD_00842 1.4e-253 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GEMLOGGD_00843 1.7e-134 stp 3.1.3.16 T phosphatase
GEMLOGGD_00844 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
GEMLOGGD_00845 1.6e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GEMLOGGD_00846 1.2e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GEMLOGGD_00847 5.8e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
GEMLOGGD_00848 4.9e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GEMLOGGD_00849 1.8e-57 asp S Asp23 family, cell envelope-related function
GEMLOGGD_00850 0.0 yloV S DAK2 domain fusion protein YloV
GEMLOGGD_00851 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GEMLOGGD_00852 6.7e-190 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GEMLOGGD_00853 1.7e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GEMLOGGD_00854 5.7e-129 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GEMLOGGD_00855 0.0 smc D Required for chromosome condensation and partitioning
GEMLOGGD_00856 6.6e-170 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GEMLOGGD_00857 2.6e-58 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GEMLOGGD_00858 1.1e-219 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GEMLOGGD_00859 2.9e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GEMLOGGD_00860 2.6e-39 ylqC S Belongs to the UPF0109 family
GEMLOGGD_00861 8.2e-96 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GEMLOGGD_00862 3.4e-140 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GEMLOGGD_00863 1.9e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GEMLOGGD_00864 1.4e-50
GEMLOGGD_00865 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
GEMLOGGD_00866 1.4e-86
GEMLOGGD_00867 2.3e-139 ecsA_2 V AAA domain, putative AbiEii toxin, Type IV TA system
GEMLOGGD_00868 8.1e-272 XK27_00765
GEMLOGGD_00870 2.9e-268 trpE 4.1.3.27 EH Anthranilate synthase component I, N terminal region
GEMLOGGD_00871 1.5e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH Peptidase C26
GEMLOGGD_00872 1.3e-166 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GEMLOGGD_00873 2.4e-123 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
GEMLOGGD_00874 2.2e-108 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
GEMLOGGD_00875 3.9e-226 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GEMLOGGD_00876 8.7e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GEMLOGGD_00877 1.5e-97 entB 3.5.1.19 Q Isochorismatase family
GEMLOGGD_00878 2.6e-177 1.6.5.5 C Zinc-binding dehydrogenase
GEMLOGGD_00879 1.6e-67 ybbJ K Acetyltransferase (GNAT) family
GEMLOGGD_00880 4.4e-217 E glutamate:sodium symporter activity
GEMLOGGD_00881 2.5e-214 3.5.1.47 E Peptidase family M20/M25/M40
GEMLOGGD_00882 5.1e-198 adhB 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GEMLOGGD_00883 2.7e-58 S Protein of unknown function (DUF1648)
GEMLOGGD_00884 3e-145 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GEMLOGGD_00885 3.8e-179 yneE K Transcriptional regulator
GEMLOGGD_00886 2.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
GEMLOGGD_00887 7.7e-180 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GEMLOGGD_00888 3.8e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GEMLOGGD_00889 2e-169 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
GEMLOGGD_00890 1.2e-126 IQ reductase
GEMLOGGD_00891 3.6e-227 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GEMLOGGD_00892 5.9e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GEMLOGGD_00893 1.2e-70 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
GEMLOGGD_00894 2.1e-260 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
GEMLOGGD_00895 3.5e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GEMLOGGD_00896 8.8e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
GEMLOGGD_00897 1.3e-134 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
GEMLOGGD_00898 2.4e-98 2.7.8.7 H Belongs to the P-Pant transferase superfamily
GEMLOGGD_00899 1.3e-123 S Protein of unknown function (DUF554)
GEMLOGGD_00900 2.7e-160 K LysR substrate binding domain
GEMLOGGD_00901 4.6e-88 ykhA 3.1.2.20 I Thioesterase superfamily
GEMLOGGD_00902 1.7e-193 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GEMLOGGD_00903 6.8e-93 K transcriptional regulator
GEMLOGGD_00904 1.2e-302 norB EGP Major Facilitator
GEMLOGGD_00905 4.4e-139 f42a O Band 7 protein
GEMLOGGD_00906 2.2e-39 L Pfam:Integrase_AP2
GEMLOGGD_00907 1.2e-25 L Phage integrase, N-terminal SAM-like domain
GEMLOGGD_00910 4e-09
GEMLOGGD_00912 1.1e-53
GEMLOGGD_00913 1.6e-28
GEMLOGGD_00914 2.5e-209 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GEMLOGGD_00915 4.5e-114 1.14.99.53 AA10 S Lytic polysaccharide mono-oxygenase, cellulose-degrading
GEMLOGGD_00916 5.8e-48 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
GEMLOGGD_00917 7.9e-41
GEMLOGGD_00918 4.3e-67 tspO T TspO/MBR family
GEMLOGGD_00919 1.4e-75 uspA T Belongs to the universal stress protein A family
GEMLOGGD_00920 8e-66 S Protein of unknown function (DUF805)
GEMLOGGD_00921 1.8e-164 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
GEMLOGGD_00922 1.3e-35
GEMLOGGD_00923 3.1e-14
GEMLOGGD_00924 6.5e-41 S transglycosylase associated protein
GEMLOGGD_00925 4.8e-29 S CsbD-like
GEMLOGGD_00926 9.4e-40
GEMLOGGD_00927 8.6e-281 pipD E Dipeptidase
GEMLOGGD_00928 5.1e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
GEMLOGGD_00929 5.7e-255 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GEMLOGGD_00930 1.8e-170 2.5.1.74 H UbiA prenyltransferase family
GEMLOGGD_00931 1.4e-136 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 U Ion channel
GEMLOGGD_00932 3.9e-50
GEMLOGGD_00933 1.3e-42
GEMLOGGD_00934 8.7e-259 gabT 2.6.1.19, 5.1.1.21 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GEMLOGGD_00935 1.4e-265 yfnA E Amino Acid
GEMLOGGD_00936 1.2e-149 yitU 3.1.3.104 S hydrolase
GEMLOGGD_00937 1.6e-268 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
GEMLOGGD_00938 2.2e-85 S Domain of unknown function (DUF4767)
GEMLOGGD_00939 2.5e-250 malT G Major Facilitator
GEMLOGGD_00940 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GEMLOGGD_00941 2.1e-193 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GEMLOGGD_00942 6.2e-196 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GEMLOGGD_00943 7.6e-205 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
GEMLOGGD_00944 7.4e-175 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
GEMLOGGD_00945 4e-170 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
GEMLOGGD_00946 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GEMLOGGD_00947 2.1e-72 ypmB S protein conserved in bacteria
GEMLOGGD_00948 1.1e-225 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
GEMLOGGD_00949 5.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GEMLOGGD_00950 1.3e-128 dnaD L Replication initiation and membrane attachment
GEMLOGGD_00952 4.1e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GEMLOGGD_00953 2e-99 metI P ABC transporter permease
GEMLOGGD_00954 8e-157 metQ_4 P Belongs to the nlpA lipoprotein family
GEMLOGGD_00955 4.4e-83 uspA T Universal stress protein family
GEMLOGGD_00956 3.5e-302 ftpA P Binding-protein-dependent transport system inner membrane component
GEMLOGGD_00957 6.4e-182 ftpB P Bacterial extracellular solute-binding protein
GEMLOGGD_00958 8.2e-179 phnT 3.6.3.30 P ATPases associated with a variety of cellular activities
GEMLOGGD_00959 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
GEMLOGGD_00960 7.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GEMLOGGD_00961 8.3e-110 ypsA S Belongs to the UPF0398 family
GEMLOGGD_00962 3.2e-56 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GEMLOGGD_00964 4e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GEMLOGGD_00966 8e-145 yjfP S COG1073 Hydrolases of the alpha beta superfamily
GEMLOGGD_00967 4.4e-73 S SnoaL-like domain
GEMLOGGD_00968 2.4e-200 M Glycosyltransferase, group 2 family protein
GEMLOGGD_00969 2.5e-208 mccF V LD-carboxypeptidase
GEMLOGGD_00970 1.4e-78 K Acetyltransferase (GNAT) domain
GEMLOGGD_00971 1.5e-239 M hydrolase, family 25
GEMLOGGD_00972 1.6e-182 mccF 3.4.17.13 V LD-carboxypeptidase
GEMLOGGD_00973 7.8e-124
GEMLOGGD_00974 6.6e-122 3.6.3.35 P ATPases associated with a variety of cellular activities
GEMLOGGD_00975 3.5e-194
GEMLOGGD_00976 4.5e-146 S hydrolase activity, acting on ester bonds
GEMLOGGD_00977 1.1e-211 yurR 1.4.5.1 E FAD dependent oxidoreductase
GEMLOGGD_00978 2.2e-66 rnhA 3.1.26.4 L Ribonuclease HI
GEMLOGGD_00979 3.3e-62 esbA S Family of unknown function (DUF5322)
GEMLOGGD_00980 4.1e-295 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
GEMLOGGD_00981 4.4e-74 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GEMLOGGD_00982 2e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GEMLOGGD_00983 3.3e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GEMLOGGD_00984 8.1e-207 carA 6.3.5.5 F Belongs to the CarA family
GEMLOGGD_00985 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GEMLOGGD_00986 8.8e-288 S Bacterial membrane protein, YfhO
GEMLOGGD_00987 6.4e-113 pgm5 G Phosphoglycerate mutase family
GEMLOGGD_00988 3.1e-71 frataxin S Domain of unknown function (DU1801)
GEMLOGGD_00991 1.7e-130 cat 2.3.1.28 V Chloramphenicol acetyltransferase
GEMLOGGD_00992 1.2e-69 S LuxR family transcriptional regulator
GEMLOGGD_00993 2.9e-136 S Uncharacterized protein conserved in bacteria (DUF2087)
GEMLOGGD_00995 9.7e-91 3.6.1.55 F NUDIX domain
GEMLOGGD_00996 2.7e-163 V ABC transporter, ATP-binding protein
GEMLOGGD_00997 3.5e-132 S ABC-2 family transporter protein
GEMLOGGD_00998 0.0 FbpA K Fibronectin-binding protein
GEMLOGGD_00999 1.9e-66 K Transcriptional regulator
GEMLOGGD_01000 7e-161 degV S EDD domain protein, DegV family
GEMLOGGD_01001 8.3e-78 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
GEMLOGGD_01002 3.4e-132 S Protein of unknown function (DUF975)
GEMLOGGD_01003 4.3e-10
GEMLOGGD_01004 1.6e-48
GEMLOGGD_01005 1.4e-147 2.7.7.12 C Domain of unknown function (DUF4931)
GEMLOGGD_01006 2.5e-209 pmrB EGP Major facilitator Superfamily
GEMLOGGD_01007 4.6e-12
GEMLOGGD_01008 6.2e-51 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
GEMLOGGD_01009 5.2e-129 yejC S Protein of unknown function (DUF1003)
GEMLOGGD_01010 2.5e-134 XK27_00890 S Domain of unknown function (DUF368)
GEMLOGGD_01011 9.3e-245 cycA E Amino acid permease
GEMLOGGD_01012 1.9e-113
GEMLOGGD_01013 4.1e-59
GEMLOGGD_01014 1.8e-279 lldP C L-lactate permease
GEMLOGGD_01015 5.1e-227
GEMLOGGD_01016 1.1e-127 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the transfer of the cytidylyl group of CTP to D-ribitol 5-phosphate
GEMLOGGD_01017 1e-190 tarJ 1.1.1.137, 1.1.1.303, 1.1.1.4, 1.1.1.405 E Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate
GEMLOGGD_01018 9.5e-195 tarK 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GEMLOGGD_01019 0.0 tarL 2.7.8.14, 2.7.8.47 H CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GEMLOGGD_01020 3.6e-91 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
GEMLOGGD_01021 1.8e-72 mgrA K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_01022 1.2e-239 gshR1 1.8.1.7 C Glutathione reductase
GEMLOGGD_01023 2.1e-51
GEMLOGGD_01024 6.3e-246 M Glycosyl transferase family group 2
GEMLOGGD_01025 7.5e-275 GT89 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GEMLOGGD_01026 1.4e-156 xerD L Phage integrase, N-terminal SAM-like domain
GEMLOGGD_01027 4.2e-32 S YozE SAM-like fold
GEMLOGGD_01028 1e-95 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GEMLOGGD_01029 4e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GEMLOGGD_01030 6.4e-168 ppaC 3.6.1.1 C inorganic pyrophosphatase
GEMLOGGD_01031 3.5e-177 K Transcriptional regulator
GEMLOGGD_01032 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GEMLOGGD_01033 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GEMLOGGD_01034 5.2e-105 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GEMLOGGD_01035 2.2e-170 lacX 5.1.3.3 G Aldose 1-epimerase
GEMLOGGD_01036 2.3e-257 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GEMLOGGD_01037 6.7e-93 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GEMLOGGD_01038 1.5e-177 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GEMLOGGD_01039 2.5e-250 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GEMLOGGD_01040 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GEMLOGGD_01041 8e-157 dprA LU DNA protecting protein DprA
GEMLOGGD_01042 9e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GEMLOGGD_01043 1.8e-161 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GEMLOGGD_01045 1.4e-228 XK27_05470 E Methionine synthase
GEMLOGGD_01046 8.9e-170 cpsY K Transcriptional regulator, LysR family
GEMLOGGD_01047 6.5e-125 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GEMLOGGD_01048 7.4e-197 XK27_00915 C Luciferase-like monooxygenase
GEMLOGGD_01049 3.3e-251 emrY EGP Major facilitator Superfamily
GEMLOGGD_01050 1.2e-261 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
GEMLOGGD_01051 3.4e-35 yozE S Belongs to the UPF0346 family
GEMLOGGD_01052 3.1e-113 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
GEMLOGGD_01053 5.1e-149 ypmR E GDSL-like Lipase/Acylhydrolase
GEMLOGGD_01054 1.5e-147 DegV S EDD domain protein, DegV family
GEMLOGGD_01055 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GEMLOGGD_01056 1.1e-188 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GEMLOGGD_01057 0.0 yfmR S ABC transporter, ATP-binding protein
GEMLOGGD_01058 9.6e-85
GEMLOGGD_01059 1.1e-228 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GEMLOGGD_01060 5.4e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GEMLOGGD_01061 9.7e-149 3.1.3.102, 3.1.3.104 S hydrolase
GEMLOGGD_01062 4.7e-206 S Tetratricopeptide repeat protein
GEMLOGGD_01063 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GEMLOGGD_01064 2.7e-249 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GEMLOGGD_01065 1.8e-213 rpsA 1.17.7.4 J Ribosomal protein S1
GEMLOGGD_01066 3.8e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GEMLOGGD_01067 2e-19 M Lysin motif
GEMLOGGD_01068 6.2e-271 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
GEMLOGGD_01069 3.6e-196 ypbB 5.1.3.1 S Helix-turn-helix domain
GEMLOGGD_01070 1.2e-95 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GEMLOGGD_01071 1.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GEMLOGGD_01072 7.9e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GEMLOGGD_01073 8.2e-129 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GEMLOGGD_01074 4.8e-69 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GEMLOGGD_01075 1.1e-164 xerD D recombinase XerD
GEMLOGGD_01076 2.9e-170 cvfB S S1 domain
GEMLOGGD_01077 1.5e-74 yeaL S Protein of unknown function (DUF441)
GEMLOGGD_01078 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GEMLOGGD_01079 1.5e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GEMLOGGD_01080 0.0 dnaE 2.7.7.7 L DNA polymerase
GEMLOGGD_01081 7.3e-29 S Protein of unknown function (DUF2929)
GEMLOGGD_01082 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GEMLOGGD_01083 1.4e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GEMLOGGD_01084 1.1e-197 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GEMLOGGD_01085 1.6e-126 trmK 2.1.1.217 S SAM-dependent methyltransferase
GEMLOGGD_01086 6.9e-223 M O-Antigen ligase
GEMLOGGD_01087 5.4e-120 drrB U ABC-2 type transporter
GEMLOGGD_01088 3.2e-167 drrA V ABC transporter
GEMLOGGD_01089 3.1e-84 K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_01090 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
GEMLOGGD_01091 7.8e-61 P Rhodanese Homology Domain
GEMLOGGD_01092 2.1e-91 yetL K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_01093 1.7e-207
GEMLOGGD_01094 1.2e-216 I transferase activity, transferring acyl groups other than amino-acyl groups
GEMLOGGD_01095 1.1e-181 C Zinc-binding dehydrogenase
GEMLOGGD_01096 0.0 3.6.3.6 P Cation transporter/ATPase, N-terminus
GEMLOGGD_01097 6.8e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GEMLOGGD_01098 6.5e-241 EGP Major facilitator Superfamily
GEMLOGGD_01099 4.3e-77 K Transcriptional regulator
GEMLOGGD_01100 1.4e-209 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GEMLOGGD_01101 2.8e-310 naoX P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
GEMLOGGD_01102 8e-137 K DeoR C terminal sensor domain
GEMLOGGD_01103 1.7e-108 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
GEMLOGGD_01104 9.1e-71 yneH 1.20.4.1 P ArsC family
GEMLOGGD_01105 1.4e-68 S Protein of unknown function (DUF1722)
GEMLOGGD_01106 2.3e-113 GM epimerase
GEMLOGGD_01107 0.0 CP_1020 S Zinc finger, swim domain protein
GEMLOGGD_01108 1.4e-119 ppaX_1 3.1.3.18, 3.6.1.1 S haloacid dehalogenase-like hydrolase
GEMLOGGD_01109 1.5e-80 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
GEMLOGGD_01110 1.3e-128 K Helix-turn-helix domain, rpiR family
GEMLOGGD_01111 3.4e-160 S Alpha beta hydrolase
GEMLOGGD_01112 9e-113 GM NmrA-like family
GEMLOGGD_01113 2.7e-76 S Uncharacterized protein conserved in bacteria (DUF2255)
GEMLOGGD_01114 8e-160 K Transcriptional regulator
GEMLOGGD_01115 1.8e-170 C nadph quinone reductase
GEMLOGGD_01116 4.7e-17 S Alpha beta hydrolase
GEMLOGGD_01117 1e-262 nox C Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
GEMLOGGD_01118 3.6e-103 desR K helix_turn_helix, Lux Regulon
GEMLOGGD_01119 4.2e-203 desK 2.7.13.3 T Histidine kinase
GEMLOGGD_01120 1.3e-134 yvfS V ABC-2 type transporter
GEMLOGGD_01121 2.6e-158 yvfR V ABC transporter
GEMLOGGD_01123 6e-82 K Acetyltransferase (GNAT) domain
GEMLOGGD_01124 2.1e-73 K MarR family
GEMLOGGD_01125 3.8e-114 S Psort location CytoplasmicMembrane, score
GEMLOGGD_01126 3.9e-162 V ABC transporter, ATP-binding protein
GEMLOGGD_01127 2.3e-128 S ABC-2 family transporter protein
GEMLOGGD_01128 3.6e-199
GEMLOGGD_01129 9.2e-203
GEMLOGGD_01130 4.8e-165 ytrB V ABC transporter, ATP-binding protein
GEMLOGGD_01131 9.5e-65 K helix_turn_helix gluconate operon transcriptional repressor
GEMLOGGD_01132 4.6e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GEMLOGGD_01133 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GEMLOGGD_01134 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GEMLOGGD_01135 6.8e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GEMLOGGD_01136 3.4e-146 recO L Involved in DNA repair and RecF pathway recombination
GEMLOGGD_01137 5.6e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GEMLOGGD_01138 4.5e-73 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
GEMLOGGD_01139 6.6e-84 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GEMLOGGD_01140 3.4e-180 phoH T phosphate starvation-inducible protein PhoH
GEMLOGGD_01141 2.6e-71 yqeY S YqeY-like protein
GEMLOGGD_01142 9.7e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GEMLOGGD_01143 2.1e-151 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GEMLOGGD_01144 1.7e-128 C Enoyl-(Acyl carrier protein) reductase
GEMLOGGD_01145 4.5e-171 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GEMLOGGD_01146 2e-224 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GEMLOGGD_01147 1.7e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GEMLOGGD_01148 3.2e-100 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GEMLOGGD_01149 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GEMLOGGD_01150 2.2e-243 hisS 6.1.1.21 J histidyl-tRNA synthetase
GEMLOGGD_01151 1.9e-155 lytH 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
GEMLOGGD_01152 1.2e-165 yniA G Fructosamine kinase
GEMLOGGD_01153 2.2e-116 3.1.3.18 J HAD-hyrolase-like
GEMLOGGD_01154 8.5e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GEMLOGGD_01155 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GEMLOGGD_01156 9.6e-58
GEMLOGGD_01157 2.9e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GEMLOGGD_01158 4.5e-177 prmA J Ribosomal protein L11 methyltransferase
GEMLOGGD_01159 3.6e-114 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
GEMLOGGD_01160 1.4e-49
GEMLOGGD_01161 1.4e-49
GEMLOGGD_01162 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GEMLOGGD_01163 6.1e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GEMLOGGD_01164 2.4e-34 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GEMLOGGD_01165 8.7e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
GEMLOGGD_01166 2e-296 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GEMLOGGD_01167 8.8e-19 dltX S D-Ala-teichoic acid biosynthesis protein
GEMLOGGD_01168 2.8e-197 pbpX2 V Beta-lactamase
GEMLOGGD_01169 1.2e-184 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GEMLOGGD_01170 0.0 dnaK O Heat shock 70 kDa protein
GEMLOGGD_01171 5.6e-80 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GEMLOGGD_01172 2.4e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GEMLOGGD_01173 7.3e-132 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
GEMLOGGD_01174 1.2e-188 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GEMLOGGD_01175 9.4e-172 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GEMLOGGD_01176 2.4e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GEMLOGGD_01177 1.3e-196 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
GEMLOGGD_01178 2e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GEMLOGGD_01179 8.5e-93
GEMLOGGD_01180 4.6e-216 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GEMLOGGD_01181 1.3e-263 ydiN 5.4.99.5 G Major Facilitator
GEMLOGGD_01182 4.6e-50 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GEMLOGGD_01183 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GEMLOGGD_01184 1.6e-46 ylxQ J ribosomal protein
GEMLOGGD_01185 9.5e-49 ylxR K Protein of unknown function (DUF448)
GEMLOGGD_01186 3.3e-217 nusA K Participates in both transcription termination and antitermination
GEMLOGGD_01187 4.2e-83 rimP J Required for maturation of 30S ribosomal subunits
GEMLOGGD_01188 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GEMLOGGD_01189 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GEMLOGGD_01190 9.5e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
GEMLOGGD_01191 8.4e-137 cdsA 2.7.7.41 I Belongs to the CDS family
GEMLOGGD_01192 1.8e-147 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GEMLOGGD_01193 2.5e-82 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GEMLOGGD_01194 2.2e-128 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GEMLOGGD_01195 1e-151 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GEMLOGGD_01196 6.5e-145 rpsB J Belongs to the universal ribosomal protein uS2 family
GEMLOGGD_01197 4.7e-134 S Haloacid dehalogenase-like hydrolase
GEMLOGGD_01198 2.3e-187 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GEMLOGGD_01199 2e-49 yazA L GIY-YIG catalytic domain protein
GEMLOGGD_01200 1.4e-136 yabB 2.1.1.223 L Methyltransferase small domain
GEMLOGGD_01201 6.4e-119 plsC 2.3.1.51 I Acyltransferase
GEMLOGGD_01202 4.3e-33 yneF S Uncharacterised protein family (UPF0154)
GEMLOGGD_01203 2.9e-36 ynzC S UPF0291 protein
GEMLOGGD_01204 5.6e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GEMLOGGD_01205 3.7e-87
GEMLOGGD_01206 3.9e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
GEMLOGGD_01207 1.1e-76
GEMLOGGD_01208 1.3e-66
GEMLOGGD_01209 3.4e-177 csbB 2.4.1.83 GT2 M Glycosyltransferase like family 2
GEMLOGGD_01210 2.1e-100 L Helix-turn-helix domain
GEMLOGGD_01211 2.1e-221 lytR5 K Cell envelope-related transcriptional attenuator domain
GEMLOGGD_01212 7.9e-143 P ATPases associated with a variety of cellular activities
GEMLOGGD_01213 1.2e-260 opuAB P Binding-protein-dependent transport system inner membrane component
GEMLOGGD_01214 4.1e-42 opuAB P Binding-protein-dependent transport system inner membrane component
GEMLOGGD_01215 4.5e-230 rodA D Cell cycle protein
GEMLOGGD_01217 1.5e-36 2.7.7.1, 3.6.1.55 F Hydrolase, nudix family
GEMLOGGD_01219 1.6e-31
GEMLOGGD_01220 5.8e-143 Q Methyltransferase
GEMLOGGD_01221 8.5e-57 ybjQ S Belongs to the UPF0145 family
GEMLOGGD_01222 7.2e-212 EGP Major facilitator Superfamily
GEMLOGGD_01223 1e-102 K Helix-turn-helix domain
GEMLOGGD_01224 2.9e-93 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GEMLOGGD_01225 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
GEMLOGGD_01226 2e-50 yrvD S Lipopolysaccharide assembly protein A domain
GEMLOGGD_01227 1.5e-138 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GEMLOGGD_01228 2.8e-179 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GEMLOGGD_01229 3.2e-46
GEMLOGGD_01230 2.4e-245 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GEMLOGGD_01231 1.5e-135 fruR K DeoR C terminal sensor domain
GEMLOGGD_01232 1.8e-170 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GEMLOGGD_01233 6.7e-292 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
GEMLOGGD_01234 9.5e-250 cpdA S Calcineurin-like phosphoesterase
GEMLOGGD_01235 1.4e-262 cps4J S Polysaccharide biosynthesis protein
GEMLOGGD_01236 1.7e-176 cps4I M Glycosyltransferase like family 2
GEMLOGGD_01237 1.6e-233
GEMLOGGD_01238 2.9e-190 cps4G M Glycosyltransferase Family 4
GEMLOGGD_01239 1.2e-202 cps4F 2.4.1.21, 2.4.1.306 GT4,GT5 M Glycosyl transferases group 1
GEMLOGGD_01240 7.9e-128 tuaA M Bacterial sugar transferase
GEMLOGGD_01241 9.6e-180 cps4D 5.1.3.2 M RmlD substrate binding domain
GEMLOGGD_01242 3.5e-146 ywqE 3.1.3.48 GM PHP domain protein
GEMLOGGD_01243 7.3e-124 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GEMLOGGD_01244 1.1e-125 epsB M biosynthesis protein
GEMLOGGD_01245 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GEMLOGGD_01246 1.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMLOGGD_01247 9.2e-270 glnPH2 P ABC transporter permease
GEMLOGGD_01248 4.3e-22
GEMLOGGD_01249 9.9e-73 S Iron-sulphur cluster biosynthesis
GEMLOGGD_01250 2.2e-49 MA20_27270 S mazG nucleotide pyrophosphohydrolase
GEMLOGGD_01251 5.1e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
GEMLOGGD_01252 3.3e-236 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GEMLOGGD_01253 4.1e-213 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GEMLOGGD_01254 6.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GEMLOGGD_01255 9.1e-159 S Tetratricopeptide repeat
GEMLOGGD_01256 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GEMLOGGD_01257 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GEMLOGGD_01258 2e-190 mdtG EGP Major Facilitator Superfamily
GEMLOGGD_01259 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GEMLOGGD_01260 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
GEMLOGGD_01261 4.8e-188 holA 2.7.7.7 L DNA polymerase III delta subunit
GEMLOGGD_01262 0.0 comEC S Competence protein ComEC
GEMLOGGD_01263 6.4e-79 comEB 3.5.4.12 F ComE operon protein 2
GEMLOGGD_01264 4.7e-126 comEA L Competence protein ComEA
GEMLOGGD_01265 9.6e-197 ylbL T Belongs to the peptidase S16 family
GEMLOGGD_01266 1.4e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GEMLOGGD_01267 7.7e-100 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
GEMLOGGD_01268 1.5e-49 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
GEMLOGGD_01269 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
GEMLOGGD_01270 1.6e-205 ftsW D Belongs to the SEDS family
GEMLOGGD_01271 1.4e-292
GEMLOGGD_01272 5.1e-259 ica2 GT2 M Glycosyl transferase family group 2
GEMLOGGD_01273 1.2e-103
GEMLOGGD_01274 1.1e-197
GEMLOGGD_01275 0.0 typA T GTP-binding protein TypA
GEMLOGGD_01276 6.3e-137 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
GEMLOGGD_01277 3.3e-46 yktA S Belongs to the UPF0223 family
GEMLOGGD_01278 4.7e-163 1.1.1.27 C L-malate dehydrogenase activity
GEMLOGGD_01279 1.2e-266 lpdA 1.8.1.4 C Dehydrogenase
GEMLOGGD_01280 1.8e-208 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
GEMLOGGD_01281 4.5e-180 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
GEMLOGGD_01282 3.6e-210 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
GEMLOGGD_01283 9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GEMLOGGD_01284 1.6e-85
GEMLOGGD_01285 3.1e-33 ykzG S Belongs to the UPF0356 family
GEMLOGGD_01286 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GEMLOGGD_01287 5.7e-188 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GEMLOGGD_01288 1.7e-28
GEMLOGGD_01289 4.1e-108 mltD CBM50 M NlpC P60 family protein
GEMLOGGD_01290 4.4e-172 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GEMLOGGD_01291 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GEMLOGGD_01292 3.6e-120 S Repeat protein
GEMLOGGD_01293 5.5e-121 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
GEMLOGGD_01294 3.8e-268 N domain, Protein
GEMLOGGD_01295 1.7e-193 S Bacterial protein of unknown function (DUF916)
GEMLOGGD_01296 2.3e-120 N WxL domain surface cell wall-binding
GEMLOGGD_01297 2.6e-115 ktrA P domain protein
GEMLOGGD_01298 1.3e-241 ktrB P Potassium uptake protein
GEMLOGGD_01299 9e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GEMLOGGD_01300 4.9e-57 XK27_04120 S Putative amino acid metabolism
GEMLOGGD_01301 7.1e-217 iscS 2.8.1.7 E Aminotransferase class V
GEMLOGGD_01302 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GEMLOGGD_01303 4.6e-28
GEMLOGGD_01304 1.9e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
GEMLOGGD_01305 7e-189 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GEMLOGGD_01306 9e-18 S Protein of unknown function (DUF3021)
GEMLOGGD_01307 2.9e-36 K LytTr DNA-binding domain
GEMLOGGD_01308 3.6e-80 cylB U ABC-2 type transporter
GEMLOGGD_01309 8.8e-79 cylA V abc transporter atp-binding protein
GEMLOGGD_01310 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GEMLOGGD_01311 1.2e-86 divIVA D DivIVA domain protein
GEMLOGGD_01312 3.4e-146 ylmH S S4 domain protein
GEMLOGGD_01313 1.2e-36 yggT S YGGT family
GEMLOGGD_01314 3.3e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GEMLOGGD_01315 1.4e-229 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GEMLOGGD_01316 5.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GEMLOGGD_01317 5.8e-163 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GEMLOGGD_01318 1.5e-197 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GEMLOGGD_01319 1.2e-260 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GEMLOGGD_01320 8.3e-179 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GEMLOGGD_01321 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
GEMLOGGD_01322 7.5e-54 ftsL D Cell division protein FtsL
GEMLOGGD_01323 1.9e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GEMLOGGD_01324 1.9e-77 mraZ K Belongs to the MraZ family
GEMLOGGD_01325 1.9e-62 S Protein of unknown function (DUF3397)
GEMLOGGD_01326 2.1e-174 corA P CorA-like Mg2+ transporter protein
GEMLOGGD_01328 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
GEMLOGGD_01329 4.5e-94 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GEMLOGGD_01330 7e-113 ywnB S NAD(P)H-binding
GEMLOGGD_01331 9.8e-210 brnQ U Component of the transport system for branched-chain amino acids
GEMLOGGD_01333 1.1e-161 rrmA 2.1.1.187 H Methyltransferase
GEMLOGGD_01334 1.7e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GEMLOGGD_01335 8.1e-205 XK27_05220 S AI-2E family transporter
GEMLOGGD_01336 3.9e-57 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GEMLOGGD_01337 7.4e-194 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GEMLOGGD_01338 5.1e-116 cutC P Participates in the control of copper homeostasis
GEMLOGGD_01339 8.9e-175 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
GEMLOGGD_01340 4.7e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GEMLOGGD_01341 2.7e-120 yjbM 2.7.6.5 S RelA SpoT domain protein
GEMLOGGD_01342 3.6e-114 yjbH Q Thioredoxin
GEMLOGGD_01343 0.0 pepF E oligoendopeptidase F
GEMLOGGD_01344 8.1e-207 coiA 3.6.4.12 S Competence protein
GEMLOGGD_01345 2.2e-131 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GEMLOGGD_01346 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GEMLOGGD_01347 1.1e-138 yhfI S Metallo-beta-lactamase superfamily
GEMLOGGD_01348 1.3e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
GEMLOGGD_01358 5.5e-08
GEMLOGGD_01368 3.5e-64
GEMLOGGD_01369 1.6e-75 yugI 5.3.1.9 J general stress protein
GEMLOGGD_01370 5.5e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GEMLOGGD_01371 3e-119 dedA S SNARE-like domain protein
GEMLOGGD_01372 3.9e-116 S Protein of unknown function (DUF1461)
GEMLOGGD_01373 1.5e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GEMLOGGD_01374 1.3e-79 yutD S Protein of unknown function (DUF1027)
GEMLOGGD_01375 8.7e-270 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
GEMLOGGD_01376 2.2e-116 S Calcineurin-like phosphoesterase
GEMLOGGD_01377 5.6e-253 cycA E Amino acid permease
GEMLOGGD_01378 7e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GEMLOGGD_01379 3.6e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
GEMLOGGD_01381 4.5e-88 S Prokaryotic N-terminal methylation motif
GEMLOGGD_01382 8.6e-20
GEMLOGGD_01383 3.2e-83 gspG NU general secretion pathway protein
GEMLOGGD_01384 5.5e-43 comGC U competence protein ComGC
GEMLOGGD_01385 1.9e-189 comGB NU type II secretion system
GEMLOGGD_01386 1.6e-174 comGA NU Type II IV secretion system protein
GEMLOGGD_01387 4.8e-160 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GEMLOGGD_01388 8.3e-131 yebC K Transcriptional regulatory protein
GEMLOGGD_01389 1.6e-49 S DsrE/DsrF-like family
GEMLOGGD_01390 2.3e-164 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
GEMLOGGD_01391 1.9e-181 ccpA K catabolite control protein A
GEMLOGGD_01392 1.7e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GEMLOGGD_01393 1.1e-80 K helix_turn_helix, mercury resistance
GEMLOGGD_01394 2.8e-56
GEMLOGGD_01395 1.9e-23 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GEMLOGGD_01396 2.6e-158 ykuT M mechanosensitive ion channel
GEMLOGGD_01397 3.2e-225 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GEMLOGGD_01398 2.6e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GEMLOGGD_01399 6.5e-87 ykuL S (CBS) domain
GEMLOGGD_01400 1.2e-94 S Phosphoesterase
GEMLOGGD_01401 1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GEMLOGGD_01402 9e-150 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GEMLOGGD_01403 7.6e-126 yslB S Protein of unknown function (DUF2507)
GEMLOGGD_01404 3.3e-52 trxA O Belongs to the thioredoxin family
GEMLOGGD_01405 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GEMLOGGD_01406 2.7e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
GEMLOGGD_01407 1.6e-48 yrzB S Belongs to the UPF0473 family
GEMLOGGD_01408 7.3e-74 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GEMLOGGD_01409 2.4e-43 yrzL S Belongs to the UPF0297 family
GEMLOGGD_01410 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GEMLOGGD_01411 9.3e-245 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GEMLOGGD_01412 7e-178 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GEMLOGGD_01413 5.3e-217 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GEMLOGGD_01414 2.8e-29 yajC U Preprotein translocase
GEMLOGGD_01415 3.3e-227 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GEMLOGGD_01416 6.3e-201 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GEMLOGGD_01417 2.1e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GEMLOGGD_01418 4.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GEMLOGGD_01419 2.7e-91
GEMLOGGD_01420 0.0 S Bacterial membrane protein YfhO
GEMLOGGD_01421 1.3e-72
GEMLOGGD_01422 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GEMLOGGD_01423 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GEMLOGGD_01424 2.7e-154 ymdB S YmdB-like protein
GEMLOGGD_01425 2.1e-216 rny S Endoribonuclease that initiates mRNA decay
GEMLOGGD_01426 5e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GEMLOGGD_01427 9.4e-231 cinA 3.5.1.42 S Belongs to the CinA family
GEMLOGGD_01428 3.7e-97 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GEMLOGGD_01429 5.7e-110 ymfM S Helix-turn-helix domain
GEMLOGGD_01430 2.9e-251 ymfH S Peptidase M16
GEMLOGGD_01431 6.5e-232 ymfF S Peptidase M16 inactive domain protein
GEMLOGGD_01432 1e-254 lysC 2.7.2.4 E Belongs to the aspartokinase family
GEMLOGGD_01433 1.5e-155 aatB ET ABC transporter substrate-binding protein
GEMLOGGD_01434 2.5e-115 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMLOGGD_01435 4.6e-109 glnP P ABC transporter permease
GEMLOGGD_01436 1.2e-146 minD D Belongs to the ParA family
GEMLOGGD_01437 1.4e-116 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
GEMLOGGD_01438 1.2e-88 mreD M rod shape-determining protein MreD
GEMLOGGD_01439 2.6e-144 mreC M Involved in formation and maintenance of cell shape
GEMLOGGD_01440 2.8e-161 mreB D cell shape determining protein MreB
GEMLOGGD_01441 1.3e-116 radC L DNA repair protein
GEMLOGGD_01442 4.7e-249 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GEMLOGGD_01443 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GEMLOGGD_01444 3e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GEMLOGGD_01445 2.9e-232 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
GEMLOGGD_01446 1.9e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GEMLOGGD_01447 1.7e-218 iscS2 2.8.1.7 E Aminotransferase class V
GEMLOGGD_01448 0.0 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GEMLOGGD_01449 5e-81 ytsP 1.8.4.14 T GAF domain-containing protein
GEMLOGGD_01450 3.1e-107 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GEMLOGGD_01451 2.6e-112 yktB S Belongs to the UPF0637 family
GEMLOGGD_01452 3.3e-80 yueI S Protein of unknown function (DUF1694)
GEMLOGGD_01453 3.1e-110 S Protein of unknown function (DUF1648)
GEMLOGGD_01454 8.6e-44 czrA K Helix-turn-helix domain
GEMLOGGD_01455 5.1e-232 malL 3.2.1.10 GH13 G COG0366 Glycosidases
GEMLOGGD_01456 9.2e-42 2.7.1.191 G PTS system fructose IIA component
GEMLOGGD_01457 2.7e-104 G PTS system mannose fructose sorbose family IID component
GEMLOGGD_01458 3.6e-103 G PTS system sorbose-specific iic component
GEMLOGGD_01459 6e-66 2.7.1.191 G PTS system sorbose subfamily IIB component
GEMLOGGD_01460 5.9e-95 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
GEMLOGGD_01461 0.0 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
GEMLOGGD_01462 1.8e-237 rarA L recombination factor protein RarA
GEMLOGGD_01463 1.5e-38
GEMLOGGD_01464 6.2e-82 usp6 T universal stress protein
GEMLOGGD_01465 1e-199 bla2 3.5.2.6 V Beta-lactamase enzyme family
GEMLOGGD_01466 3.3e-161 2.3.1.19 K Helix-turn-helix XRE-family like proteins
GEMLOGGD_01467 5.1e-295 glpQ3 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GEMLOGGD_01468 5.4e-214 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GEMLOGGD_01469 3.6e-188 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GEMLOGGD_01470 3.5e-177 S Protein of unknown function (DUF2785)
GEMLOGGD_01471 2.8e-168 hicD1 1.1.1.27 C Belongs to the LDH MDH superfamily
GEMLOGGD_01472 6.5e-148 metQ M Belongs to the nlpA lipoprotein family
GEMLOGGD_01473 1.4e-111 metI U ABC transporter permease
GEMLOGGD_01474 4e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GEMLOGGD_01475 3.6e-48 gcsH2 E glycine cleavage
GEMLOGGD_01476 9.3e-220 rodA D Belongs to the SEDS family
GEMLOGGD_01477 3.3e-33 S Protein of unknown function (DUF2969)
GEMLOGGD_01478 2.3e-43 yidD S Could be involved in insertion of integral membrane proteins into the membrane
GEMLOGGD_01479 2.7e-180 mbl D Cell shape determining protein MreB Mrl
GEMLOGGD_01480 2.1e-102 J Acetyltransferase (GNAT) domain
GEMLOGGD_01481 4.4e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GEMLOGGD_01482 1.1e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GEMLOGGD_01483 2.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GEMLOGGD_01484 2.3e-165 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GEMLOGGD_01485 2.7e-280 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GEMLOGGD_01486 1.8e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GEMLOGGD_01487 6e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GEMLOGGD_01488 2.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GEMLOGGD_01489 6.5e-128 atpB C it plays a direct role in the translocation of protons across the membrane
GEMLOGGD_01490 1e-232 pyrP F Permease
GEMLOGGD_01491 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GEMLOGGD_01492 1.1e-231 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GEMLOGGD_01493 6.9e-192 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GEMLOGGD_01494 1e-159 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GEMLOGGD_01495 1.2e-197 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GEMLOGGD_01496 9.3e-109 tdk 2.7.1.21 F thymidine kinase
GEMLOGGD_01497 1.5e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
GEMLOGGD_01498 5.9e-137 cobQ S glutamine amidotransferase
GEMLOGGD_01499 9.8e-196 manA 5.3.1.8 G mannose-6-phosphate isomerase
GEMLOGGD_01500 1.4e-192 ampC V Beta-lactamase
GEMLOGGD_01501 5.2e-29
GEMLOGGD_01502 1e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
GEMLOGGD_01503 1.9e-58
GEMLOGGD_01504 5.3e-125
GEMLOGGD_01505 0.0 yfiC V ABC transporter
GEMLOGGD_01506 0.0 ycfI V ABC transporter, ATP-binding protein
GEMLOGGD_01507 3.3e-65 S Protein of unknown function (DUF1093)
GEMLOGGD_01508 3.8e-135 yxkH G Polysaccharide deacetylase
GEMLOGGD_01511 1.4e-79
GEMLOGGD_01512 8.5e-34 hol S Bacteriophage holin
GEMLOGGD_01513 4.4e-46
GEMLOGGD_01514 2.7e-184 M hydrolase, family 25
GEMLOGGD_01516 1.6e-71 S Protein of unknown function (DUF1617)
GEMLOGGD_01517 0.0 sidC GT2,GT4 LM DNA recombination
GEMLOGGD_01518 5.9e-61
GEMLOGGD_01519 0.0 D NLP P60 protein
GEMLOGGD_01520 6.3e-64
GEMLOGGD_01521 1e-76 S Phage tail tube protein, TTP
GEMLOGGD_01522 1.9e-54
GEMLOGGD_01523 1.3e-88
GEMLOGGD_01524 1.5e-50
GEMLOGGD_01525 4.6e-52
GEMLOGGD_01527 2e-175 S Phage major capsid protein E
GEMLOGGD_01528 2.6e-50
GEMLOGGD_01529 2.7e-14 S Domain of unknown function (DUF4355)
GEMLOGGD_01531 2.4e-30
GEMLOGGD_01532 4.7e-302 S Phage Mu protein F like protein
GEMLOGGD_01533 3.8e-38 J Cysteine protease Prp
GEMLOGGD_01534 1.3e-266 S Phage portal protein, SPP1 Gp6-like
GEMLOGGD_01535 3.7e-240 ps334 S Terminase-like family
GEMLOGGD_01536 6.4e-64 ps333 L Terminase small subunit
GEMLOGGD_01537 9.9e-13
GEMLOGGD_01539 2.1e-18 S KTSC domain
GEMLOGGD_01542 1.7e-81 arpU S Phage transcriptional regulator, ArpU family
GEMLOGGD_01544 8.4e-66 rusA 3.1.22.4 L Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
GEMLOGGD_01545 6.2e-64
GEMLOGGD_01546 1.6e-94
GEMLOGGD_01547 7e-49
GEMLOGGD_01548 1.8e-146 3.1.3.16 L DnaD domain protein
GEMLOGGD_01549 3.9e-137 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
GEMLOGGD_01550 2.1e-155 recT L RecT family
GEMLOGGD_01551 6.3e-69
GEMLOGGD_01552 1.9e-14 S Domain of unknown function (DUF1508)
GEMLOGGD_01553 3.1e-84
GEMLOGGD_01554 8.5e-53
GEMLOGGD_01557 5.8e-26 K Cro/C1-type HTH DNA-binding domain
GEMLOGGD_01558 1.7e-37 K sequence-specific DNA binding
GEMLOGGD_01561 7.5e-22 S protein disulfide oxidoreductase activity
GEMLOGGD_01562 3.6e-09 S Pfam:Peptidase_M78
GEMLOGGD_01563 8.5e-11 S DNA/RNA non-specific endonuclease
GEMLOGGD_01567 1.3e-11 M LysM domain
GEMLOGGD_01572 4.3e-40 S Domain of unknown function DUF1829
GEMLOGGD_01573 5.6e-219 int L Belongs to the 'phage' integrase family
GEMLOGGD_01575 8.9e-30
GEMLOGGD_01577 2e-38
GEMLOGGD_01578 1.4e-43
GEMLOGGD_01579 7.3e-83 K MarR family
GEMLOGGD_01580 0.0 bztC D nuclear chromosome segregation
GEMLOGGD_01581 1.7e-309 M MucBP domain
GEMLOGGD_01582 2.7e-16
GEMLOGGD_01583 7.2e-17
GEMLOGGD_01584 6.5e-12
GEMLOGGD_01585 1.1e-18
GEMLOGGD_01586 1.6e-16
GEMLOGGD_01587 1.6e-16
GEMLOGGD_01588 1.9e-18
GEMLOGGD_01589 1.6e-16
GEMLOGGD_01590 0.0 msbA2 3.6.3.44 P ABC transporter transmembrane region
GEMLOGGD_01591 2.9e-274 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
GEMLOGGD_01592 0.0 macB3 V ABC transporter, ATP-binding protein
GEMLOGGD_01593 6.8e-24
GEMLOGGD_01594 1.1e-258 pgi 5.3.1.9 G Belongs to the GPI family
GEMLOGGD_01595 9.7e-155 glcU U sugar transport
GEMLOGGD_01596 9.4e-217 ywbD 2.1.1.191 J S-adenosylmethionine-dependent methyltransferase
GEMLOGGD_01597 2.9e-287 yclK 2.7.13.3 T Histidine kinase
GEMLOGGD_01598 1.6e-134 K response regulator
GEMLOGGD_01599 3e-243 XK27_08635 S UPF0210 protein
GEMLOGGD_01600 2.3e-38 gcvR T Belongs to the UPF0237 family
GEMLOGGD_01601 1.5e-169 EG EamA-like transporter family
GEMLOGGD_01603 7.7e-92 S ECF-type riboflavin transporter, S component
GEMLOGGD_01604 8.6e-48
GEMLOGGD_01605 9.8e-214 yceI EGP Major facilitator Superfamily
GEMLOGGD_01606 1.9e-138 3.6.1.13, 3.6.1.55 F NUDIX domain
GEMLOGGD_01607 3.8e-23
GEMLOGGD_01609 2.9e-159 S Alpha/beta hydrolase of unknown function (DUF915)
GEMLOGGD_01610 2.8e-173 ykfC 3.4.14.13 M NlpC/P60 family
GEMLOGGD_01611 6.6e-81 K AsnC family
GEMLOGGD_01612 2e-35
GEMLOGGD_01613 5.1e-34
GEMLOGGD_01614 7.8e-219 2.7.7.65 T diguanylate cyclase
GEMLOGGD_01615 7.8e-296 S ABC transporter, ATP-binding protein
GEMLOGGD_01616 2e-106 3.2.2.20 K acetyltransferase
GEMLOGGD_01617 1.5e-82 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GEMLOGGD_01618 9.5e-29 S Phage terminase, small subunit
GEMLOGGD_01619 1.4e-15 L Phage-associated protein
GEMLOGGD_01620 3.6e-16
GEMLOGGD_01622 5.8e-30
GEMLOGGD_01623 6.7e-28
GEMLOGGD_01625 5.6e-182 S Phage capsid family
GEMLOGGD_01626 3.5e-114 S Phage portal protein
GEMLOGGD_01628 2.8e-129 terL S overlaps another CDS with the same product name
GEMLOGGD_01629 2.7e-39
GEMLOGGD_01630 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
GEMLOGGD_01631 4.4e-140 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GEMLOGGD_01632 1.7e-41 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GEMLOGGD_01633 5e-162 degV S Uncharacterised protein, DegV family COG1307
GEMLOGGD_01634 1.5e-231 hom1 1.1.1.3 E Homoserine dehydrogenase
GEMLOGGD_01635 2.6e-244 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
GEMLOGGD_01636 4.8e-165 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
GEMLOGGD_01637 1.4e-176 XK27_08835 S ABC transporter
GEMLOGGD_01638 8.7e-154 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
GEMLOGGD_01639 6.4e-137 XK27_08845 S ABC transporter, ATP-binding protein
GEMLOGGD_01640 7.4e-258 npr 1.11.1.1 C NADH oxidase
GEMLOGGD_01641 1.5e-158 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
GEMLOGGD_01642 4.8e-137 terC P membrane
GEMLOGGD_01643 1.2e-84 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GEMLOGGD_01644 3.3e-200 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GEMLOGGD_01645 7.6e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
GEMLOGGD_01646 2.5e-58 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GEMLOGGD_01647 6.4e-134 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GEMLOGGD_01648 3.5e-129 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GEMLOGGD_01649 4.1e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GEMLOGGD_01650 7.9e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
GEMLOGGD_01651 1.2e-233 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GEMLOGGD_01652 4.3e-118 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
GEMLOGGD_01653 1.3e-215 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
GEMLOGGD_01654 3.2e-163 hisK 3.1.3.15 E Histidinol phosphate phosphatase, HisJ
GEMLOGGD_01655 4.6e-216 ysaA V RDD family
GEMLOGGD_01656 7.6e-166 corA P CorA-like Mg2+ transporter protein
GEMLOGGD_01657 3.4e-50 S Domain of unknown function (DU1801)
GEMLOGGD_01658 3.5e-13 rmeB K transcriptional regulator, MerR family
GEMLOGGD_01659 8e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GEMLOGGD_01660 2e-185 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GEMLOGGD_01661 3.7e-34
GEMLOGGD_01662 3.2e-112 S Protein of unknown function (DUF1211)
GEMLOGGD_01663 0.0 ydgH S MMPL family
GEMLOGGD_01664 7.2e-289 M domain protein
GEMLOGGD_01665 1.1e-74 yjcF S Acetyltransferase (GNAT) domain
GEMLOGGD_01666 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GEMLOGGD_01667 0.0 glpQ 3.1.4.46 C phosphodiesterase
GEMLOGGD_01668 2.3e-184 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
GEMLOGGD_01669 4.4e-143 S Alpha/beta hydrolase of unknown function (DUF915)
GEMLOGGD_01670 6.2e-182 3.6.4.13 S domain, Protein
GEMLOGGD_01671 3.6e-168 S Polyphosphate kinase 2 (PPK2)
GEMLOGGD_01672 2.5e-98 drgA C Nitroreductase family
GEMLOGGD_01673 3.1e-178 iunH2 3.2.2.1 F nucleoside hydrolase
GEMLOGGD_01674 3.4e-150 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GEMLOGGD_01675 3.1e-153 glcU U sugar transport
GEMLOGGD_01676 5.9e-73 bglK_1 GK ROK family
GEMLOGGD_01677 3.1e-89 bglK_1 GK ROK family
GEMLOGGD_01678 3.7e-156 pflC 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GEMLOGGD_01679 3.7e-134 yciT K DeoR C terminal sensor domain
GEMLOGGD_01680 0.0 ybiW 2.3.1.54 C Pyruvate formate lyase-like
GEMLOGGD_01681 1.8e-178 K sugar-binding domain protein
GEMLOGGD_01682 1.5e-124 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
GEMLOGGD_01683 4.2e-141 S Sucrose-6F-phosphate phosphohydrolase
GEMLOGGD_01684 6.4e-176 ccpB 5.1.1.1 K lacI family
GEMLOGGD_01685 1e-156 K Helix-turn-helix domain, rpiR family
GEMLOGGD_01686 7.9e-177 S Oxidoreductase family, NAD-binding Rossmann fold
GEMLOGGD_01687 5.9e-199 yhhX 1.1.1.371 S Oxidoreductase family, C-terminal alpha/beta domain
GEMLOGGD_01688 0.0 yjcE P Sodium proton antiporter
GEMLOGGD_01689 5.7e-280 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GEMLOGGD_01690 3.7e-107 pncA Q Isochorismatase family
GEMLOGGD_01691 2.7e-132
GEMLOGGD_01692 5.1e-125 skfE V ABC transporter
GEMLOGGD_01693 9.5e-65 yvoA_1 K Transcriptional regulator, GntR family
GEMLOGGD_01694 1.2e-45 S Enterocin A Immunity
GEMLOGGD_01695 7e-175 D Alpha beta
GEMLOGGD_01696 0.0 pepF2 E Oligopeptidase F
GEMLOGGD_01697 1.3e-72 K Transcriptional regulator
GEMLOGGD_01698 3e-164
GEMLOGGD_01699 1.3e-57
GEMLOGGD_01700 2.6e-48
GEMLOGGD_01701 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GEMLOGGD_01702 5.4e-68
GEMLOGGD_01703 8.4e-145 yjfP S Dienelactone hydrolase family
GEMLOGGD_01704 6.6e-56 dsbJ 2.7.1.180, 5.3.4.1 CO Thioredoxin
GEMLOGGD_01705 4.2e-206 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GEMLOGGD_01706 5.2e-47
GEMLOGGD_01707 6.3e-45
GEMLOGGD_01708 5e-82 yybC S Protein of unknown function (DUF2798)
GEMLOGGD_01709 1.7e-73
GEMLOGGD_01710 4e-60
GEMLOGGD_01711 5.1e-195 lplA 6.3.1.20 H Lipoate-protein ligase
GEMLOGGD_01712 0.0 acm2 3.2.1.17 NU Bacterial SH3 domain
GEMLOGGD_01713 3e-72 G PTS system fructose IIA component
GEMLOGGD_01714 3.2e-147 G PTS system mannose/fructose/sorbose family IID component
GEMLOGGD_01715 3.1e-142 agaC G PTS system sorbose-specific iic component
GEMLOGGD_01716 1.2e-85 agaB 2.7.1.191 K PTS system sorbose subfamily IIB component
GEMLOGGD_01717 2e-129 K UTRA domain
GEMLOGGD_01718 1.6e-79 uspA T universal stress protein
GEMLOGGD_01719 1.9e-156 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GEMLOGGD_01720 1.7e-48 K Cro/C1-type HTH DNA-binding domain
GEMLOGGD_01721 3.3e-21 S Protein of unknown function (DUF2929)
GEMLOGGD_01722 1e-223 lsgC M Glycosyl transferases group 1
GEMLOGGD_01723 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GEMLOGGD_01724 4e-161 S Putative esterase
GEMLOGGD_01725 2.4e-130 gntR2 K Transcriptional regulator
GEMLOGGD_01726 5.8e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GEMLOGGD_01727 2e-138
GEMLOGGD_01728 1.4e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GEMLOGGD_01729 5.5e-138 rrp8 K LytTr DNA-binding domain
GEMLOGGD_01730 4.2e-92 M1-874 K Domain of unknown function (DUF1836)
GEMLOGGD_01731 4.5e-61
GEMLOGGD_01732 7e-74 hspX O Belongs to the small heat shock protein (HSP20) family
GEMLOGGD_01733 4.4e-58
GEMLOGGD_01734 1.8e-240 yhdP S Transporter associated domain
GEMLOGGD_01735 4.9e-87 nrdI F Belongs to the NrdI family
GEMLOGGD_01736 2.6e-270 yjcE P Sodium proton antiporter
GEMLOGGD_01737 1.1e-212 yttB EGP Major facilitator Superfamily
GEMLOGGD_01738 1.2e-61 K helix_turn_helix, mercury resistance
GEMLOGGD_01739 5.1e-173 C Zinc-binding dehydrogenase
GEMLOGGD_01740 8.5e-57 S SdpI/YhfL protein family
GEMLOGGD_01741 6.3e-295 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GEMLOGGD_01742 5.5e-261 gabR K Bacterial regulatory proteins, gntR family
GEMLOGGD_01743 1.4e-217 patA 2.6.1.1 E Aminotransferase
GEMLOGGD_01744 4e-104 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GEMLOGGD_01745 3e-18
GEMLOGGD_01746 1.7e-126 S membrane transporter protein
GEMLOGGD_01747 1.9e-161 mleR K LysR family
GEMLOGGD_01748 5.6e-115 ylbE GM NAD(P)H-binding
GEMLOGGD_01749 8.2e-96 wecD K Acetyltransferase (GNAT) family
GEMLOGGD_01750 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GEMLOGGD_01751 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GEMLOGGD_01752 2.9e-171 ydcZ S Putative inner membrane exporter, YdcZ
GEMLOGGD_01753 1.4e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GEMLOGGD_01754 1.8e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GEMLOGGD_01755 9.7e-169 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GEMLOGGD_01756 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GEMLOGGD_01757 1.2e-213 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GEMLOGGD_01758 4.4e-244 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GEMLOGGD_01759 1.1e-172 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GEMLOGGD_01760 1.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GEMLOGGD_01761 1e-298 pucR QT Purine catabolism regulatory protein-like family
GEMLOGGD_01762 2.7e-236 pbuX F xanthine permease
GEMLOGGD_01763 2.4e-221 pbuG S Permease family
GEMLOGGD_01764 5.6e-161 GM NmrA-like family
GEMLOGGD_01765 6.5e-156 T EAL domain
GEMLOGGD_01766 4.4e-94
GEMLOGGD_01767 7.8e-252 pgaC GT2 M Glycosyl transferase
GEMLOGGD_01768 3.9e-127 2.1.1.14 E Methionine synthase
GEMLOGGD_01769 1.4e-215 purD 6.3.4.13 F Belongs to the GARS family
GEMLOGGD_01770 2.7e-288 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GEMLOGGD_01771 9.9e-103 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GEMLOGGD_01772 7.7e-191 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GEMLOGGD_01773 1.1e-280 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GEMLOGGD_01774 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GEMLOGGD_01775 2.2e-125 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GEMLOGGD_01776 3.6e-41 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GEMLOGGD_01777 2.9e-131 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GEMLOGGD_01778 3.9e-212 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GEMLOGGD_01779 1.7e-79 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GEMLOGGD_01780 1.5e-223 XK27_09615 1.3.5.4 S reductase
GEMLOGGD_01781 1.8e-110 XK27_09620 1.3.5.4 S NADPH-dependent FMN reductase
GEMLOGGD_01782 1.9e-189 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
GEMLOGGD_01783 1.4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
GEMLOGGD_01784 1.9e-118 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
GEMLOGGD_01785 7.5e-149 S Alpha/beta hydrolase of unknown function (DUF915)
GEMLOGGD_01786 1.5e-180 ansA 3.5.1.1 EJ Asparaginase
GEMLOGGD_01787 1.7e-139 cysA V ABC transporter, ATP-binding protein
GEMLOGGD_01788 0.0 V FtsX-like permease family
GEMLOGGD_01789 8e-42
GEMLOGGD_01790 7.9e-61 gntR1 K Transcriptional regulator, GntR family
GEMLOGGD_01791 6.9e-164 V ABC transporter, ATP-binding protein
GEMLOGGD_01792 5.8e-149
GEMLOGGD_01793 6.7e-81 uspA T universal stress protein
GEMLOGGD_01794 1.2e-35
GEMLOGGD_01795 4.2e-71 gtcA S Teichoic acid glycosylation protein
GEMLOGGD_01796 1.1e-88
GEMLOGGD_01797 9.4e-50
GEMLOGGD_01799 3.3e-233 malY 4.4.1.8 E Aminotransferase, class I
GEMLOGGD_01800 7.3e-86 2.7.7.1, 3.6.1.55 F belongs to the nudix hydrolase family
GEMLOGGD_01801 5.4e-118
GEMLOGGD_01802 1.5e-52
GEMLOGGD_01804 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
GEMLOGGD_01805 3.6e-282 thrC 4.2.3.1 E Threonine synthase
GEMLOGGD_01806 4.5e-146 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
GEMLOGGD_01807 5.8e-11 mcbG S Pentapeptide repeats (8 copies)
GEMLOGGD_01808 1.7e-111 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GEMLOGGD_01809 1.7e-102 3.6.1.13 L Belongs to the Nudix hydrolase family
GEMLOGGD_01810 7.8e-69 FG Scavenger mRNA decapping enzyme C-term binding
GEMLOGGD_01811 7.5e-135 IQ Enoyl-(Acyl carrier protein) reductase
GEMLOGGD_01812 1.8e-36 XK27_01315 S Protein of unknown function (DUF2829)
GEMLOGGD_01813 1.9e-211 S Bacterial protein of unknown function (DUF871)
GEMLOGGD_01814 2.1e-232 S Sterol carrier protein domain
GEMLOGGD_01815 5.2e-224 EGP Major facilitator Superfamily
GEMLOGGD_01816 2.1e-88 niaR S 3H domain
GEMLOGGD_01817 2.3e-265 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GEMLOGGD_01818 5.9e-115 K Transcriptional regulator
GEMLOGGD_01819 1.8e-133 V AAA domain, putative AbiEii toxin, Type IV TA system
GEMLOGGD_01820 1.7e-84 dps P Belongs to the Dps family
GEMLOGGD_01822 5.4e-59 yafQ S endonuclease activity
GEMLOGGD_01823 1.7e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
GEMLOGGD_01824 3e-99 L Integrase
GEMLOGGD_01825 2.4e-56
GEMLOGGD_01827 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
GEMLOGGD_01828 4.1e-141 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GEMLOGGD_01829 3.5e-08 S Enterocin A Immunity
GEMLOGGD_01830 2.1e-54 txlA O Thioredoxin-like domain
GEMLOGGD_01831 1.1e-38 yrkD S Metal-sensitive transcriptional repressor
GEMLOGGD_01832 3.8e-17
GEMLOGGD_01833 2.5e-95 dps P Belongs to the Dps family
GEMLOGGD_01834 3.8e-31 copZ P Heavy-metal-associated domain
GEMLOGGD_01835 8.2e-134 V AAA domain, putative AbiEii toxin, Type IV TA system
GEMLOGGD_01836 1.1e-245 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
GEMLOGGD_01837 5.2e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_01838 3.3e-296 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_01839 1.8e-54 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
GEMLOGGD_01840 2.3e-48 pts20B 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GEMLOGGD_01841 2e-129 gntR K UTRA
GEMLOGGD_01842 6.8e-141 epsV 2.7.8.12 S glycosyl transferase family 2
GEMLOGGD_01843 6.5e-122 pgm7 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GEMLOGGD_01844 1.8e-81
GEMLOGGD_01845 9.8e-152 S hydrolase
GEMLOGGD_01846 6.5e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GEMLOGGD_01847 1.2e-150 EG EamA-like transporter family
GEMLOGGD_01848 1.3e-176 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GEMLOGGD_01849 1.2e-100 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GEMLOGGD_01850 4.5e-233
GEMLOGGD_01851 1.5e-77 fld C Flavodoxin
GEMLOGGD_01852 0.0 M Bacterial Ig-like domain (group 3)
GEMLOGGD_01853 1.1e-58 M Bacterial Ig-like domain (group 3)
GEMLOGGD_01854 0.0 M Bacterial surface protein 26-residue PARCEL repeat (3 repeats)
GEMLOGGD_01855 2.7e-32
GEMLOGGD_01856 3.5e-127 aroD 1.1.1.25, 4.2.1.10 E Type I 3-dehydroquinase
GEMLOGGD_01857 2.2e-268 ycaM E amino acid
GEMLOGGD_01858 3.9e-78 K Winged helix DNA-binding domain
GEMLOGGD_01859 7.3e-166 S Oxidoreductase, aldo keto reductase family protein
GEMLOGGD_01860 5.7e-163 akr5f 1.1.1.346 S reductase
GEMLOGGD_01861 4.6e-163 K Transcriptional regulator
GEMLOGGD_01863 1.8e-84 hmpT S Pfam:DUF3816
GEMLOGGD_01864 1.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GEMLOGGD_01865 1e-111
GEMLOGGD_01866 1.8e-160 M Glycosyl hydrolases family 25
GEMLOGGD_01867 5.9e-143 yvpB S Peptidase_C39 like family
GEMLOGGD_01868 1.1e-92 yueI S Protein of unknown function (DUF1694)
GEMLOGGD_01869 1.6e-115 S Protein of unknown function (DUF554)
GEMLOGGD_01870 6.4e-148 KT helix_turn_helix, mercury resistance
GEMLOGGD_01871 1.7e-227 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GEMLOGGD_01872 6.6e-95 S Protein of unknown function (DUF1440)
GEMLOGGD_01873 2.9e-172 hrtB V ABC transporter permease
GEMLOGGD_01874 5.6e-121 devA 3.6.3.25 V ABC transporter, ATP-binding protein
GEMLOGGD_01875 1.4e-90 2.7.7.65 T phosphorelay sensor kinase activity
GEMLOGGD_01876 4.2e-186 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GEMLOGGD_01877 1.1e-98 1.5.1.3 H RibD C-terminal domain
GEMLOGGD_01878 1.5e-187 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GEMLOGGD_01879 7.5e-110 S Membrane
GEMLOGGD_01880 1.2e-155 mleP3 S Membrane transport protein
GEMLOGGD_01881 3.4e-258 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
GEMLOGGD_01882 4.9e-189 ynfM EGP Major facilitator Superfamily
GEMLOGGD_01883 2.8e-125 hadL 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GEMLOGGD_01884 1.1e-270 lmrB EGP Major facilitator Superfamily
GEMLOGGD_01885 2e-75 S Domain of unknown function (DUF4811)
GEMLOGGD_01886 4e-99 rimL J Acetyltransferase (GNAT) domain
GEMLOGGD_01887 1.2e-172 S Conserved hypothetical protein 698
GEMLOGGD_01888 3.7e-151 rlrG K Transcriptional regulator
GEMLOGGD_01889 1.2e-296 tagE5 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
GEMLOGGD_01890 6.9e-268 tagE6 2.4.1.52 GT4 M Glycosyl transferases group 1
GEMLOGGD_01891 1.6e-33 lytE M LysM domain protein
GEMLOGGD_01892 7e-54 lytE M LysM domain
GEMLOGGD_01893 1.8e-92 ogt 2.1.1.63 L Methyltransferase
GEMLOGGD_01894 3.6e-168 natA S ABC transporter, ATP-binding protein
GEMLOGGD_01895 1.2e-211 natB CP ABC-2 family transporter protein
GEMLOGGD_01896 1e-128 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GEMLOGGD_01897 6.6e-56 yphJ 4.1.1.44 S Carboxymuconolactone decarboxylase family
GEMLOGGD_01898 3.2e-76 yphH S Cupin domain
GEMLOGGD_01899 4.4e-79 K transcriptional regulator, MerR family
GEMLOGGD_01900 2.3e-237 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GEMLOGGD_01901 0.0 ylbB V ABC transporter permease
GEMLOGGD_01902 3.7e-120 macB V ABC transporter, ATP-binding protein
GEMLOGGD_01904 8e-117 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GEMLOGGD_01905 2.2e-100 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GEMLOGGD_01906 8.4e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GEMLOGGD_01907 2.4e-83
GEMLOGGD_01908 1.6e-85 yvbK 3.1.3.25 K GNAT family
GEMLOGGD_01909 7e-37
GEMLOGGD_01910 8.2e-48
GEMLOGGD_01911 1.2e-112 pgm8 G Histidine phosphatase superfamily (branch 1)
GEMLOGGD_01912 8.4e-60 S Domain of unknown function (DUF4440)
GEMLOGGD_01913 2.8e-157 K LysR substrate binding domain
GEMLOGGD_01914 1.2e-103 GM NAD(P)H-binding
GEMLOGGD_01915 2.3e-195 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GEMLOGGD_01916 1.4e-150 IQ Enoyl-(Acyl carrier protein) reductase
GEMLOGGD_01917 4.7e-141 aRA11 1.1.1.346 S reductase
GEMLOGGD_01918 3.3e-82 yiiE S Protein of unknown function (DUF1211)
GEMLOGGD_01919 4.2e-76 darA C Flavodoxin
GEMLOGGD_01920 3e-126 IQ reductase
GEMLOGGD_01921 8.1e-85 glcU U sugar transport
GEMLOGGD_01922 2.5e-86 GM NAD(P)H-binding
GEMLOGGD_01923 6.4e-109 akr5f 1.1.1.346 S reductase
GEMLOGGD_01924 2e-78 K Transcriptional regulator
GEMLOGGD_01926 3e-25 fldA C Flavodoxin
GEMLOGGD_01927 4.4e-10 adhR K helix_turn_helix, mercury resistance
GEMLOGGD_01928 2.5e-114 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GEMLOGGD_01929 1.3e-130 C Aldo keto reductase
GEMLOGGD_01930 1.5e-142 akr5f 1.1.1.346 S reductase
GEMLOGGD_01931 1.3e-142 EGP Major Facilitator Superfamily
GEMLOGGD_01932 5.7e-83 GM NAD(P)H-binding
GEMLOGGD_01933 6.1e-76 T Belongs to the universal stress protein A family
GEMLOGGD_01934 5.8e-95 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
GEMLOGGD_01935 1.9e-124 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GEMLOGGD_01936 1.5e-81
GEMLOGGD_01937 3.9e-102 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GEMLOGGD_01938 5.7e-222 patB 4.4.1.8 E Aminotransferase, class I
GEMLOGGD_01939 9.7e-102 M Protein of unknown function (DUF3737)
GEMLOGGD_01940 6.3e-193 C Aldo/keto reductase family
GEMLOGGD_01942 0.0 mdlB V ABC transporter
GEMLOGGD_01943 0.0 mdlA V ABC transporter
GEMLOGGD_01944 7.4e-245 EGP Major facilitator Superfamily
GEMLOGGD_01946 6.4e-08
GEMLOGGD_01947 1e-175 yhgE V domain protein
GEMLOGGD_01948 1.1e-95 K Transcriptional regulator (TetR family)
GEMLOGGD_01949 1.4e-53 K helix_turn_helix, Arsenical Resistance Operon Repressor
GEMLOGGD_01950 8.8e-141 endA F DNA RNA non-specific endonuclease
GEMLOGGD_01951 2.1e-102 speG J Acetyltransferase (GNAT) domain
GEMLOGGD_01952 5.7e-97 2.3.1.128 J Acetyltransferase (GNAT) domain
GEMLOGGD_01953 1.7e-221 S CAAX protease self-immunity
GEMLOGGD_01954 3.2e-308 ybiT S ABC transporter, ATP-binding protein
GEMLOGGD_01955 2e-146 3.1.3.102, 3.1.3.104 S hydrolase
GEMLOGGD_01956 0.0 S Predicted membrane protein (DUF2207)
GEMLOGGD_01957 0.0 uvrA3 L excinuclease ABC
GEMLOGGD_01958 1.3e-205 EGP Major facilitator Superfamily
GEMLOGGD_01959 2.4e-172 ropB K Helix-turn-helix XRE-family like proteins
GEMLOGGD_01960 2.9e-232 yxiO S Vacuole effluxer Atg22 like
GEMLOGGD_01961 4.3e-255 npp S type I phosphodiesterase nucleotide pyrophosphatase
GEMLOGGD_01962 2.4e-158 I alpha/beta hydrolase fold
GEMLOGGD_01963 1.3e-128 treR K UTRA
GEMLOGGD_01964 1.6e-237
GEMLOGGD_01965 5.6e-39 S Cytochrome B5
GEMLOGGD_01966 2.2e-88 pts21A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GEMLOGGD_01967 6.2e-218 2.7.7.65 T Diguanylate cyclase, GGDEF domain
GEMLOGGD_01968 3.1e-127 yliE T EAL domain
GEMLOGGD_01969 2.2e-104 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GEMLOGGD_01970 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
GEMLOGGD_01971 2e-80
GEMLOGGD_01972 4.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GEMLOGGD_01973 5.8e-191 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GEMLOGGD_01974 7.6e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GEMLOGGD_01975 4.9e-22
GEMLOGGD_01976 4.4e-79
GEMLOGGD_01977 2.2e-165 K LysR substrate binding domain
GEMLOGGD_01978 2.4e-243 P Sodium:sulfate symporter transmembrane region
GEMLOGGD_01979 3.7e-287 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
GEMLOGGD_01980 7.4e-264 S response to antibiotic
GEMLOGGD_01981 1.8e-133 S zinc-ribbon domain
GEMLOGGD_01983 3.2e-37
GEMLOGGD_01984 8.2e-134 aroD S Alpha/beta hydrolase family
GEMLOGGD_01985 5.2e-177 S Phosphotransferase system, EIIC
GEMLOGGD_01986 9.7e-269 I acetylesterase activity
GEMLOGGD_01987 2.1e-223 sdrF M Collagen binding domain
GEMLOGGD_01988 1.1e-159 yicL EG EamA-like transporter family
GEMLOGGD_01989 4.4e-129 E lipolytic protein G-D-S-L family
GEMLOGGD_01990 1.1e-177 4.1.1.52 S Amidohydrolase
GEMLOGGD_01991 2.1e-111 K Transcriptional regulator C-terminal region
GEMLOGGD_01992 1.4e-47 3.6.4.12 K HxlR-like helix-turn-helix
GEMLOGGD_01993 1.2e-160 ypbG 2.7.1.2 GK ROK family
GEMLOGGD_01994 0.0 lmrA 3.6.3.44 V ABC transporter
GEMLOGGD_01995 2.9e-96 rmaB K Transcriptional regulator, MarR family
GEMLOGGD_01996 5e-119 drgA C Nitroreductase family
GEMLOGGD_01997 0.0 nagE 2.7.1.193, 2.7.1.199, 2.7.1.211 G phosphotransferase system, EIIB
GEMLOGGD_01998 8.1e-109 cmpC S ATPases associated with a variety of cellular activities
GEMLOGGD_01999 8.1e-153 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
GEMLOGGD_02000 3.5e-169 XK27_00670 S ABC transporter
GEMLOGGD_02001 6.7e-260
GEMLOGGD_02002 8.6e-63
GEMLOGGD_02003 8.1e-188 S Cell surface protein
GEMLOGGD_02004 5.1e-91 S WxL domain surface cell wall-binding
GEMLOGGD_02005 2.4e-97 acuB S Domain in cystathionine beta-synthase and other proteins.
GEMLOGGD_02006 9.5e-124 livF E ABC transporter
GEMLOGGD_02007 1.8e-139 livG E Branched-chain amino acid ATP-binding cassette transporter
GEMLOGGD_02008 4.5e-140 livM E Branched-chain amino acid transport system / permease component
GEMLOGGD_02009 6.5e-154 livH U Branched-chain amino acid transport system / permease component
GEMLOGGD_02010 5.4e-212 livJ E Receptor family ligand binding region
GEMLOGGD_02012 7e-33
GEMLOGGD_02013 1.7e-113 zmp3 O Zinc-dependent metalloprotease
GEMLOGGD_02014 2.8e-82 gtrA S GtrA-like protein
GEMLOGGD_02015 7.9e-122 K Helix-turn-helix XRE-family like proteins
GEMLOGGD_02016 4.1e-284 mntH P H( )-stimulated, divalent metal cation uptake system
GEMLOGGD_02017 6.8e-72 T Belongs to the universal stress protein A family
GEMLOGGD_02018 4e-46
GEMLOGGD_02019 1.9e-116 S SNARE associated Golgi protein
GEMLOGGD_02020 2e-49 K Transcriptional regulator, ArsR family
GEMLOGGD_02021 1.2e-95 cadD P Cadmium resistance transporter
GEMLOGGD_02022 0.0 yhcA V ABC transporter, ATP-binding protein
GEMLOGGD_02023 0.0 P Concanavalin A-like lectin/glucanases superfamily
GEMLOGGD_02024 7.4e-64
GEMLOGGD_02025 3.4e-160 T Calcineurin-like phosphoesterase superfamily domain
GEMLOGGD_02026 3.6e-54
GEMLOGGD_02027 2e-149 dicA K Helix-turn-helix domain
GEMLOGGD_02028 6.8e-75 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GEMLOGGD_02029 7e-53 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GEMLOGGD_02030 3.5e-269 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_02031 3.1e-280 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_02032 1.8e-184 1.1.1.219 GM Male sterility protein
GEMLOGGD_02033 2.7e-76 K helix_turn_helix, mercury resistance
GEMLOGGD_02034 2.3e-65 M LysM domain
GEMLOGGD_02035 2.3e-95 M Lysin motif
GEMLOGGD_02036 4.7e-108 S SdpI/YhfL protein family
GEMLOGGD_02037 1.8e-54 nudA S ASCH
GEMLOGGD_02038 9.1e-164 psaA P Belongs to the bacterial solute-binding protein 9 family
GEMLOGGD_02039 4.2e-92
GEMLOGGD_02040 2e-120 tag 3.2.2.20 L Methyladenine glycosylase
GEMLOGGD_02041 3.3e-219 T diguanylate cyclase
GEMLOGGD_02042 1.2e-73 S Psort location Cytoplasmic, score
GEMLOGGD_02043 2.1e-285 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
GEMLOGGD_02044 2.6e-166 K Bacterial regulatory helix-turn-helix protein, lysR family
GEMLOGGD_02045 6e-73
GEMLOGGD_02046 1.4e-130 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GEMLOGGD_02047 1.3e-175 C C4-dicarboxylate transmembrane transporter activity
GEMLOGGD_02048 3e-116 GM NAD(P)H-binding
GEMLOGGD_02049 2.6e-91 S Phosphatidylethanolamine-binding protein
GEMLOGGD_02050 2.3e-77 yphH S Cupin domain
GEMLOGGD_02051 2.4e-59 I sulfurtransferase activity
GEMLOGGD_02052 2.5e-138 IQ reductase
GEMLOGGD_02053 3.6e-117 GM NAD(P)H-binding
GEMLOGGD_02054 8.6e-218 ykiI
GEMLOGGD_02055 0.0 V ABC transporter
GEMLOGGD_02056 4.8e-311 XK27_09600 V ABC transporter, ATP-binding protein
GEMLOGGD_02057 9.1e-177 O protein import
GEMLOGGD_02058 3.7e-229 amd 3.5.1.47 E Peptidase family M20/M25/M40
GEMLOGGD_02059 5e-162 IQ KR domain
GEMLOGGD_02061 1.4e-69
GEMLOGGD_02062 1.5e-144 K Helix-turn-helix XRE-family like proteins
GEMLOGGD_02063 2.8e-266 yjeM E Amino Acid
GEMLOGGD_02064 3.9e-66 lysM M LysM domain
GEMLOGGD_02065 1.3e-223 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
GEMLOGGD_02066 5.4e-214 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
GEMLOGGD_02067 0.0 ctpA 3.6.3.54 P P-type ATPase
GEMLOGGD_02068 6.4e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GEMLOGGD_02069 2.6e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GEMLOGGD_02070 0.0 M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
GEMLOGGD_02071 6e-140 K Helix-turn-helix domain
GEMLOGGD_02072 2.9e-38 S TfoX C-terminal domain
GEMLOGGD_02073 3.5e-228 hpk9 2.7.13.3 T GHKL domain
GEMLOGGD_02074 4.2e-262
GEMLOGGD_02075 1.3e-75
GEMLOGGD_02076 9.2e-187 S Cell surface protein
GEMLOGGD_02077 1.7e-101 S WxL domain surface cell wall-binding
GEMLOGGD_02078 3e-176 1.6.5.5 C Alcohol dehydrogenase GroES-like domain
GEMLOGGD_02079 3.8e-69 S Iron-sulphur cluster biosynthesis
GEMLOGGD_02080 2.5e-115 S GyrI-like small molecule binding domain
GEMLOGGD_02081 5.2e-187 S Cell surface protein
GEMLOGGD_02083 7.5e-101 S WxL domain surface cell wall-binding
GEMLOGGD_02084 1.1e-62
GEMLOGGD_02085 2.5e-212 NU Mycoplasma protein of unknown function, DUF285
GEMLOGGD_02086 2.3e-116
GEMLOGGD_02087 3e-116 S Haloacid dehalogenase-like hydrolase
GEMLOGGD_02088 2e-61 K Transcriptional regulator, HxlR family
GEMLOGGD_02089 4.9e-213 ytbD EGP Major facilitator Superfamily
GEMLOGGD_02090 1.6e-93 M ErfK YbiS YcfS YnhG
GEMLOGGD_02091 0.0 asnB 6.3.5.4 E Asparagine synthase
GEMLOGGD_02092 5.7e-135 K LytTr DNA-binding domain
GEMLOGGD_02093 8.3e-186 2.7.13.3 T GHKL domain
GEMLOGGD_02094 7.9e-100 fadR K Bacterial regulatory proteins, tetR family
GEMLOGGD_02095 1.1e-167 GM NmrA-like family
GEMLOGGD_02096 9.1e-267 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
GEMLOGGD_02097 0.0 M Glycosyl hydrolases family 25
GEMLOGGD_02098 8.5e-47 S Domain of unknown function (DUF1905)
GEMLOGGD_02099 3.7e-63 hxlR K HxlR-like helix-turn-helix
GEMLOGGD_02100 9.8e-132 ydfG S KR domain
GEMLOGGD_02101 3.2e-98 K Bacterial regulatory proteins, tetR family
GEMLOGGD_02102 1.2e-191 1.1.1.219 GM Male sterility protein
GEMLOGGD_02103 4.1e-101 S Protein of unknown function (DUF1211)
GEMLOGGD_02104 1.5e-180 S Aldo keto reductase
GEMLOGGD_02107 6e-253 yfjF U Sugar (and other) transporter
GEMLOGGD_02108 4.3e-109 K Bacterial regulatory proteins, tetR family
GEMLOGGD_02109 1.2e-169 fhuD P Periplasmic binding protein
GEMLOGGD_02110 1.1e-144 fhuC 3.6.3.34 HP ABC transporter
GEMLOGGD_02111 2.1e-177 sirB U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GEMLOGGD_02112 7.8e-172 fhuG U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GEMLOGGD_02113 5.4e-92 K Bacterial regulatory proteins, tetR family
GEMLOGGD_02114 4.1e-164 GM NmrA-like family
GEMLOGGD_02115 2.5e-130 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GEMLOGGD_02116 1.3e-68 maa S transferase hexapeptide repeat
GEMLOGGD_02117 7.5e-152 IQ Enoyl-(Acyl carrier protein) reductase
GEMLOGGD_02118 1.6e-64 K helix_turn_helix, mercury resistance
GEMLOGGD_02119 0.0 pelX UW LPXTG-motif cell wall anchor domain protein
GEMLOGGD_02120 2e-39 pelX UW LPXTG-motif cell wall anchor domain protein
GEMLOGGD_02121 6.1e-15 S Bacterial protein of unknown function (DUF916)
GEMLOGGD_02122 6.1e-132 S Bacterial protein of unknown function (DUF916)
GEMLOGGD_02123 8.7e-83 S WxL domain surface cell wall-binding
GEMLOGGD_02124 1.7e-179 NU Mycoplasma protein of unknown function, DUF285
GEMLOGGD_02125 1.4e-116 K Bacterial regulatory proteins, tetR family
GEMLOGGD_02126 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GEMLOGGD_02127 3.5e-291 yjcE P Sodium proton antiporter
GEMLOGGD_02128 1.5e-152 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
GEMLOGGD_02129 8.7e-162 K LysR substrate binding domain
GEMLOGGD_02130 8.6e-284 1.3.5.4 C FAD binding domain
GEMLOGGD_02131 0.0 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S MucBP domain
GEMLOGGD_02132 2.2e-115 K UTRA
GEMLOGGD_02133 4.4e-269 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_02134 1.6e-247 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_02135 4.1e-65
GEMLOGGD_02136 1.5e-11
GEMLOGGD_02137 1e-29 pcaC 4.1.1.44 S Carboxymuconolactone decarboxylase family
GEMLOGGD_02138 1.3e-23 rmeD K helix_turn_helix, mercury resistance
GEMLOGGD_02139 7.6e-64 S Protein of unknown function (DUF1093)
GEMLOGGD_02140 1.5e-207 S Membrane
GEMLOGGD_02141 1.9e-43 S Protein of unknown function (DUF3781)
GEMLOGGD_02142 4e-107 ydeA S intracellular protease amidase
GEMLOGGD_02143 8.3e-41 K HxlR-like helix-turn-helix
GEMLOGGD_02144 1.9e-66
GEMLOGGD_02145 1.3e-64 V ABC transporter
GEMLOGGD_02146 2.3e-51 K Helix-turn-helix domain
GEMLOGGD_02147 3.8e-204 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
GEMLOGGD_02148 2.5e-36 3.2.1.17, 3.4.17.14, 3.5.1.28 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GEMLOGGD_02149 1.1e-100 M ErfK YbiS YcfS YnhG
GEMLOGGD_02150 5.9e-112 akr5f 1.1.1.346 S reductase
GEMLOGGD_02151 3.7e-108 GM NAD(P)H-binding
GEMLOGGD_02152 3.2e-77 3.5.4.1 GM SnoaL-like domain
GEMLOGGD_02153 7.2e-259 qacA EGP Fungal trichothecene efflux pump (TRI12)
GEMLOGGD_02154 9.2e-65 S Domain of unknown function (DUF4440)
GEMLOGGD_02155 2.4e-104 K Bacterial regulatory proteins, tetR family
GEMLOGGD_02157 6.8e-33 L transposase activity
GEMLOGGD_02159 8.8e-40
GEMLOGGD_02160 7.9e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GEMLOGGD_02161 1.9e-171 K AI-2E family transporter
GEMLOGGD_02162 8.3e-210 xylR GK ROK family
GEMLOGGD_02163 7.8e-82
GEMLOGGD_02164 4.7e-232 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GEMLOGGD_02165 3.6e-163
GEMLOGGD_02166 2e-202 KLT Protein tyrosine kinase
GEMLOGGD_02167 6.8e-25 S Protein of unknown function (DUF4064)
GEMLOGGD_02168 6e-97 S Domain of unknown function (DUF4352)
GEMLOGGD_02169 3.9e-75 S Psort location Cytoplasmic, score
GEMLOGGD_02170 4.8e-55
GEMLOGGD_02171 1.6e-110 S membrane transporter protein
GEMLOGGD_02172 2.3e-54 azlD S branched-chain amino acid
GEMLOGGD_02173 5.1e-131 azlC E branched-chain amino acid
GEMLOGGD_02174 1.3e-90 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
GEMLOGGD_02175 4.9e-238 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GEMLOGGD_02176 1.3e-213 hpk31 2.7.13.3 T Histidine kinase
GEMLOGGD_02177 3.2e-124 K response regulator
GEMLOGGD_02178 5.5e-124 yoaK S Protein of unknown function (DUF1275)
GEMLOGGD_02179 2.9e-160 prsA 3.1.3.16, 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GEMLOGGD_02180 2.3e-212 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GEMLOGGD_02181 5.2e-125 XK27_01040 S Protein of unknown function (DUF1129)
GEMLOGGD_02182 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GEMLOGGD_02183 9.8e-31 yyzM S Bacterial protein of unknown function (DUF951)
GEMLOGGD_02184 1.2e-155 spo0J K Belongs to the ParB family
GEMLOGGD_02185 1.8e-136 soj D Sporulation initiation inhibitor
GEMLOGGD_02186 2.7e-149 noc K Belongs to the ParB family
GEMLOGGD_02187 2.4e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GEMLOGGD_02188 4.1e-226 nupG F Nucleoside
GEMLOGGD_02189 0.0 S Bacterial membrane protein YfhO
GEMLOGGD_02190 4.3e-147 S Alpha/beta hydrolase of unknown function (DUF915)
GEMLOGGD_02191 2.1e-168 K LysR substrate binding domain
GEMLOGGD_02192 2.7e-235 EK Aminotransferase, class I
GEMLOGGD_02193 1.8e-126 tcyA ET Belongs to the bacterial solute-binding protein 3 family
GEMLOGGD_02194 8.1e-123 tcyB E ABC transporter
GEMLOGGD_02195 3.6e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMLOGGD_02196 3.3e-120 tcyA ET Belongs to the bacterial solute-binding protein 3 family
GEMLOGGD_02197 2.9e-78 KT response to antibiotic
GEMLOGGD_02198 6.8e-53 K Transcriptional regulator
GEMLOGGD_02199 5.1e-84 XK27_06920 S Protein of unknown function (DUF1700)
GEMLOGGD_02200 5e-128 S Putative adhesin
GEMLOGGD_02201 0.0 scrA 2.7.1.193, 2.7.1.211 G phosphotransferase system
GEMLOGGD_02202 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
GEMLOGGD_02203 3.2e-181 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
GEMLOGGD_02204 1.3e-204 S DUF218 domain
GEMLOGGD_02205 2e-127 ybbM S Uncharacterised protein family (UPF0014)
GEMLOGGD_02206 9.4e-118 ybbL S ABC transporter, ATP-binding protein
GEMLOGGD_02207 4.2e-275 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GEMLOGGD_02208 1.2e-76
GEMLOGGD_02209 6.5e-151 qorB 1.6.5.2 GM NmrA-like family
GEMLOGGD_02210 9.4e-147 cof S haloacid dehalogenase-like hydrolase
GEMLOGGD_02211 1.1e-92 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GEMLOGGD_02212 4e-308 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
GEMLOGGD_02213 2.8e-122 mngA 2.7.1.195, 2.7.1.202 U Phosphotransferase system, EIIC
GEMLOGGD_02214 2.4e-26 mngA 2.7.1.195, 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
GEMLOGGD_02215 1.7e-20 fryA 2.7.1.202 G COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
GEMLOGGD_02216 2.2e-90 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GEMLOGGD_02217 2e-77 merR K MerR family regulatory protein
GEMLOGGD_02218 2.6e-155 1.6.5.2 GM NmrA-like family
GEMLOGGD_02219 0.0 treB 2.7.1.193, 2.7.1.211 G phosphotransferase system
GEMLOGGD_02220 3.9e-127 magIII L Base excision DNA repair protein, HhH-GPD family
GEMLOGGD_02221 1.4e-08
GEMLOGGD_02222 8.2e-69 S NADPH-dependent FMN reductase
GEMLOGGD_02223 1.7e-21 S NADPH-dependent FMN reductase
GEMLOGGD_02224 7.9e-238 S module of peptide synthetase
GEMLOGGD_02225 4.2e-104
GEMLOGGD_02226 9.8e-88 perR P Belongs to the Fur family
GEMLOGGD_02227 7.1e-59 S Enterocin A Immunity
GEMLOGGD_02228 5.4e-36 S Phospholipase_D-nuclease N-terminal
GEMLOGGD_02229 1.8e-169 cpdA 2.1.2.2, 3.1.4.17, 3.1.4.53 S Calcineurin-like phosphoesterase
GEMLOGGD_02230 3.8e-104 J Acetyltransferase (GNAT) domain
GEMLOGGD_02231 5.1e-64 lrgA S LrgA family
GEMLOGGD_02232 7.3e-127 lrgB M LrgB-like family
GEMLOGGD_02233 2.5e-145 DegV S EDD domain protein, DegV family
GEMLOGGD_02234 4.1e-25
GEMLOGGD_02235 3.5e-118 yugP S Putative neutral zinc metallopeptidase
GEMLOGGD_02236 1.1e-294 crtI 1.3.99.26, 1.3.99.28, 1.3.99.29, 1.3.99.31 Q Flavin containing amine oxidoreductase
GEMLOGGD_02237 7.4e-166 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I Squalene/phytoene synthase
GEMLOGGD_02238 1.7e-184 D Alpha beta
GEMLOGGD_02239 7.1e-198 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GEMLOGGD_02240 8.1e-257 gor 1.8.1.7 C Glutathione reductase
GEMLOGGD_02241 3.4e-55 S Enterocin A Immunity
GEMLOGGD_02242 7.4e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GEMLOGGD_02243 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GEMLOGGD_02244 3.5e-185 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GEMLOGGD_02245 1.7e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
GEMLOGGD_02246 4.8e-279 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GEMLOGGD_02248 6.2e-82
GEMLOGGD_02249 1.5e-256 yhdG E C-terminus of AA_permease
GEMLOGGD_02251 0.0 kup P Transport of potassium into the cell
GEMLOGGD_02252 4.6e-166 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GEMLOGGD_02253 9e-179 K AI-2E family transporter
GEMLOGGD_02254 4e-217 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
GEMLOGGD_02255 4.4e-59 qacC P Small Multidrug Resistance protein
GEMLOGGD_02256 1.1e-44 qacH U Small Multidrug Resistance protein
GEMLOGGD_02257 3e-116 hly S protein, hemolysin III
GEMLOGGD_02258 5.1e-54 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
GEMLOGGD_02259 2.7e-160 czcD P cation diffusion facilitator family transporter
GEMLOGGD_02260 2.7e-103 K Helix-turn-helix XRE-family like proteins
GEMLOGGD_02262 2.1e-21
GEMLOGGD_02264 6.5e-96 tag 3.2.2.20 L glycosylase
GEMLOGGD_02265 1.2e-213 folP 2.5.1.15 H dihydropteroate synthase
GEMLOGGD_02266 1.7e-105 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
GEMLOGGD_02267 4.8e-249 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GEMLOGGD_02268 2.6e-103 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
GEMLOGGD_02269 2.8e-93 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
GEMLOGGD_02270 2.2e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GEMLOGGD_02271 4.7e-83 cvpA S Colicin V production protein
GEMLOGGD_02272 7.5e-169 znuA P Belongs to the bacterial solute-binding protein 9 family
GEMLOGGD_02273 8.6e-249 EGP Major facilitator Superfamily
GEMLOGGD_02275 7e-40
GEMLOGGD_02276 6.2e-96 V VanZ like family
GEMLOGGD_02277 5e-195 blaA6 V Beta-lactamase
GEMLOGGD_02278 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GEMLOGGD_02279 2.5e-160 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GEMLOGGD_02280 5.1e-53 yitW S Pfam:DUF59
GEMLOGGD_02281 7.7e-174 S Aldo keto reductase
GEMLOGGD_02282 2.9e-30 FG HIT domain
GEMLOGGD_02283 1.5e-55 FG HIT domain
GEMLOGGD_02284 8.1e-38 S Bacteriocin-protection, YdeI or OmpD-Associated
GEMLOGGD_02285 1.4e-77
GEMLOGGD_02286 9e-121 E GDSL-like Lipase/Acylhydrolase family
GEMLOGGD_02287 1.1e-306 U Belongs to the BCCT transporter (TC 2.A.15) family
GEMLOGGD_02288 0.0 cadA P P-type ATPase
GEMLOGGD_02290 1.3e-122 yyaQ S YjbR
GEMLOGGD_02291 2.4e-220 S Uncharacterized protein conserved in bacteria (DUF2325)
GEMLOGGD_02292 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
GEMLOGGD_02293 1.3e-199 frlB M SIS domain
GEMLOGGD_02294 6.1e-27 3.2.2.10 S Belongs to the LOG family
GEMLOGGD_02295 1.2e-255 nhaC C Na H antiporter NhaC
GEMLOGGD_02296 2.4e-251 cycA E Amino acid permease
GEMLOGGD_02297 2.3e-167 S Alpha/beta hydrolase of unknown function (DUF915)
GEMLOGGD_02298 7.3e-86 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
GEMLOGGD_02299 4.8e-162 azoB GM NmrA-like family
GEMLOGGD_02300 1.6e-65 K Winged helix DNA-binding domain
GEMLOGGD_02301 2e-70 spx4 1.20.4.1 P ArsC family
GEMLOGGD_02302 1.7e-66 yeaO S Protein of unknown function, DUF488
GEMLOGGD_02303 4e-53
GEMLOGGD_02304 4.1e-214 mutY L A G-specific adenine glycosylase
GEMLOGGD_02305 1.9e-62
GEMLOGGD_02306 3.1e-84
GEMLOGGD_02307 3.4e-79 hsp3 O Belongs to the small heat shock protein (HSP20) family
GEMLOGGD_02308 2e-55
GEMLOGGD_02309 2.1e-14
GEMLOGGD_02310 1.1e-115 GM NmrA-like family
GEMLOGGD_02311 1.3e-81 elaA S GNAT family
GEMLOGGD_02312 1.6e-158 EG EamA-like transporter family
GEMLOGGD_02313 1.8e-119 S membrane
GEMLOGGD_02314 6.8e-111 S VIT family
GEMLOGGD_02315 1.3e-190 pva2 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GEMLOGGD_02316 0.0 copB 3.6.3.4 P P-type ATPase
GEMLOGGD_02317 9.4e-74 copR K Copper transport repressor CopY TcrY
GEMLOGGD_02318 7.4e-40
GEMLOGGD_02319 3.5e-73 S COG NOG18757 non supervised orthologous group
GEMLOGGD_02320 4.1e-246 lmrB EGP Major facilitator Superfamily
GEMLOGGD_02321 3.4e-25
GEMLOGGD_02322 1.1e-49
GEMLOGGD_02323 9.4e-65 ycgX S Protein of unknown function (DUF1398)
GEMLOGGD_02324 6.8e-251 U Belongs to the purine-cytosine permease (2.A.39) family
GEMLOGGD_02325 5.9e-214 mdtG EGP Major facilitator Superfamily
GEMLOGGD_02326 2e-180 D Alpha beta
GEMLOGGD_02327 3.1e-78 M1-874 K Domain of unknown function (DUF1836)
GEMLOGGD_02328 4.5e-85 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
GEMLOGGD_02329 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
GEMLOGGD_02330 1.1e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
GEMLOGGD_02331 3.8e-152 ywkB S Membrane transport protein
GEMLOGGD_02332 5.2e-164 yvgN C Aldo keto reductase
GEMLOGGD_02333 9.2e-133 thrE S Putative threonine/serine exporter
GEMLOGGD_02334 2e-77 S Threonine/Serine exporter, ThrE
GEMLOGGD_02335 2.3e-43 S Protein of unknown function (DUF1093)
GEMLOGGD_02336 1.1e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GEMLOGGD_02337 2.7e-91 ymdB S Macro domain protein
GEMLOGGD_02338 1.7e-94 K transcriptional regulator
GEMLOGGD_02339 5.5e-50 yvlA
GEMLOGGD_02340 1e-160 ypuA S Protein of unknown function (DUF1002)
GEMLOGGD_02341 0.0
GEMLOGGD_02342 2.2e-185 S Bacterial protein of unknown function (DUF916)
GEMLOGGD_02343 1.7e-129 S WxL domain surface cell wall-binding
GEMLOGGD_02344 1.5e-135 T Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
GEMLOGGD_02345 1.2e-88 K Winged helix DNA-binding domain
GEMLOGGD_02346 2.4e-116 luxT K Bacterial regulatory proteins, tetR family
GEMLOGGD_02347 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
GEMLOGGD_02348 1.8e-27
GEMLOGGD_02349 9.6e-285 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
GEMLOGGD_02350 1.5e-75 mltD CBM50 M PFAM NLP P60 protein
GEMLOGGD_02351 2.5e-53
GEMLOGGD_02352 4.2e-62
GEMLOGGD_02354 8.6e-13
GEMLOGGD_02355 2.8e-65 XK27_09885 V VanZ like family
GEMLOGGD_02357 1.3e-11 K Cro/C1-type HTH DNA-binding domain
GEMLOGGD_02358 9.5e-109
GEMLOGGD_02359 1.3e-53 S Uncharacterized protein conserved in bacteria (DUF2316)
GEMLOGGD_02360 1.3e-161 4.1.1.46 S Amidohydrolase
GEMLOGGD_02361 9e-104 K transcriptional regulator
GEMLOGGD_02362 4.2e-183 yfeX P Peroxidase
GEMLOGGD_02363 1.3e-136 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GEMLOGGD_02364 2.6e-129 ydcF S Gram-negative-bacterium-type cell wall biogenesis
GEMLOGGD_02365 2.3e-184 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
GEMLOGGD_02366 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
GEMLOGGD_02367 6.3e-142 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GEMLOGGD_02368 9.5e-55 txlA O Thioredoxin-like domain
GEMLOGGD_02369 5.6e-40 yrkD S Metal-sensitive transcriptional repressor
GEMLOGGD_02370 1.6e-18
GEMLOGGD_02371 1.2e-94 dps P Belongs to the Dps family
GEMLOGGD_02372 1.6e-32 copZ P Heavy-metal-associated domain
GEMLOGGD_02373 3.3e-118 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
GEMLOGGD_02374 0.0 pepO 3.4.24.71 O Peptidase family M13
GEMLOGGD_02375 1.9e-83 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GEMLOGGD_02376 1.3e-262 nox C NADH oxidase
GEMLOGGD_02377 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
GEMLOGGD_02378 6.1e-164 S Cell surface protein
GEMLOGGD_02379 1.5e-118 S WxL domain surface cell wall-binding
GEMLOGGD_02380 2.3e-99 S WxL domain surface cell wall-binding
GEMLOGGD_02381 1e-44
GEMLOGGD_02382 1.2e-103 K Bacterial regulatory proteins, tetR family
GEMLOGGD_02383 1.5e-49
GEMLOGGD_02384 2.2e-246 S Putative metallopeptidase domain
GEMLOGGD_02385 2.4e-220 3.1.3.1 S associated with various cellular activities
GEMLOGGD_02386 1.8e-108 aqpZ U Belongs to the MIP aquaporin (TC 1.A.8) family
GEMLOGGD_02387 0.0 ubiB S ABC1 family
GEMLOGGD_02388 6.9e-251 brnQ U Component of the transport system for branched-chain amino acids
GEMLOGGD_02389 0.0 lacS G Transporter
GEMLOGGD_02390 0.0 lacA 3.2.1.23 G -beta-galactosidase
GEMLOGGD_02391 1.6e-188 lacR K Transcriptional regulator
GEMLOGGD_02392 0.0 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
GEMLOGGD_02393 1.6e-230 mdtH P Sugar (and other) transporter
GEMLOGGD_02394 7.9e-304 ram2 3.2.1.40 G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
GEMLOGGD_02395 8.6e-232 EGP Major facilitator Superfamily
GEMLOGGD_02396 7.4e-183 rhaR K helix_turn_helix, arabinose operon control protein
GEMLOGGD_02397 5.1e-110 fic D Fic/DOC family
GEMLOGGD_02398 1.6e-76 K Helix-turn-helix XRE-family like proteins
GEMLOGGD_02399 3.3e-152 galR K Transcriptional regulator
GEMLOGGD_02400 2.6e-07 galR K Transcriptional regulator
GEMLOGGD_02401 1.3e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GEMLOGGD_02402 3.1e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GEMLOGGD_02403 9.3e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GEMLOGGD_02404 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
GEMLOGGD_02405 8.3e-187 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
GEMLOGGD_02406 0.0 rafA 3.2.1.22 G alpha-galactosidase
GEMLOGGD_02407 0.0 lacS G Transporter
GEMLOGGD_02408 4.1e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GEMLOGGD_02409 1.1e-173 galR K Transcriptional regulator
GEMLOGGD_02410 2.6e-194 C Aldo keto reductase family protein
GEMLOGGD_02411 2.4e-65 S pyridoxamine 5-phosphate
GEMLOGGD_02412 0.0 1.3.5.4 C FAD binding domain
GEMLOGGD_02413 8.2e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GEMLOGGD_02414 1.9e-130 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
GEMLOGGD_02415 1.2e-214 ydiM G Transporter
GEMLOGGD_02416 4.2e-169 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GEMLOGGD_02417 3.4e-163 K Transcriptional regulator, LysR family
GEMLOGGD_02418 6.7e-210 ydiN G Major Facilitator Superfamily
GEMLOGGD_02419 7.6e-64
GEMLOGGD_02420 1.8e-155 estA S Putative esterase
GEMLOGGD_02421 1.2e-134 K UTRA domain
GEMLOGGD_02422 2.4e-248 pts29C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_02423 3e-165 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GEMLOGGD_02424 1.9e-161 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
GEMLOGGD_02425 1.7e-212 S Bacterial protein of unknown function (DUF871)
GEMLOGGD_02426 1e-292 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_02427 0.0 pts30BCA 2.7.1.193, 2.7.1.211 G phosphotransferase system
GEMLOGGD_02428 1.3e-154 licT K CAT RNA binding domain
GEMLOGGD_02429 3.4e-293 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_02430 9.4e-291 pbg10 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_02431 0.0 bglP 2.7.1.193, 2.7.1.211 G phosphotransferase system
GEMLOGGD_02432 2.5e-158 licT K CAT RNA binding domain
GEMLOGGD_02433 0.0 treP 2.4.1.64 GH65 G hydrolase, family 65, central catalytic
GEMLOGGD_02434 2.1e-174 K Transcriptional regulator, LacI family
GEMLOGGD_02435 1.5e-269 G Major Facilitator
GEMLOGGD_02436 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GEMLOGGD_02438 2.9e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GEMLOGGD_02439 1.3e-145 yxeH S hydrolase
GEMLOGGD_02440 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GEMLOGGD_02441 7e-113 tal 2.2.1.2 F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GEMLOGGD_02442 6.4e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GEMLOGGD_02443 6.3e-45 ulaB 2.7.1.194, 2.7.1.200 G Phosphotransferase system galactitol-specific IIB component
GEMLOGGD_02444 6.7e-78 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GEMLOGGD_02445 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GEMLOGGD_02446 1.3e-113 gph 3.1.3.18 S Haloacid dehalogenase-like hydrolase
GEMLOGGD_02447 3e-188 gutB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
GEMLOGGD_02448 1.1e-231 gatC G PTS system sugar-specific permease component
GEMLOGGD_02449 1.1e-44 2.7.1.194, 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
GEMLOGGD_02450 8.1e-79 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GEMLOGGD_02451 5.2e-123 K DeoR C terminal sensor domain
GEMLOGGD_02452 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GEMLOGGD_02453 1.5e-49 yueI S Protein of unknown function (DUF1694)
GEMLOGGD_02454 8.1e-10 yueI S Protein of unknown function (DUF1694)
GEMLOGGD_02455 9.6e-103 maa 2.3.1.18, 2.3.1.79 S Maltose O-acetyltransferase
GEMLOGGD_02456 1.3e-265 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
GEMLOGGD_02457 1e-136 araD 4.1.2.17, 4.1.2.19, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
GEMLOGGD_02458 1.9e-305 araB 2.7.1.12, 2.7.1.16, 2.7.1.5 G carbohydrate kinase FGGY
GEMLOGGD_02459 5.5e-256 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
GEMLOGGD_02460 1.4e-206 araR K Transcriptional regulator
GEMLOGGD_02461 7.4e-136 K Helix-turn-helix domain, rpiR family
GEMLOGGD_02462 3.7e-72 yueI S Protein of unknown function (DUF1694)
GEMLOGGD_02463 1.3e-164 I alpha/beta hydrolase fold
GEMLOGGD_02464 5.2e-161 I alpha/beta hydrolase fold
GEMLOGGD_02465 2.6e-272 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GEMLOGGD_02466 5.2e-207 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GEMLOGGD_02467 1.9e-135 kguE 2.7.1.45 G Xylose isomerase domain protein TIM barrel
GEMLOGGD_02468 5.2e-156 nanK GK ROK family
GEMLOGGD_02469 6.2e-165 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
GEMLOGGD_02470 1.1e-121 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GEMLOGGD_02471 4.9e-229 1.7.1.15 S Pyridine nucleotide-disulphide oxidoreductase
GEMLOGGD_02472 4.2e-70 S Pyrimidine dimer DNA glycosylase
GEMLOGGD_02473 4.5e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
GEMLOGGD_02474 3.6e-11
GEMLOGGD_02475 9e-13 ytgB S Transglycosylase associated protein
GEMLOGGD_02476 3.9e-175 katA 1.11.1.6 C Belongs to the catalase family
GEMLOGGD_02477 1.1e-95 katA 1.11.1.6 C Belongs to the catalase family
GEMLOGGD_02478 1.9e-77 yneH 1.20.4.1 K ArsC family
GEMLOGGD_02479 2.8e-134 K LytTr DNA-binding domain
GEMLOGGD_02480 8.7e-160 2.7.13.3 T GHKL domain
GEMLOGGD_02481 1.8e-12
GEMLOGGD_02482 5.3e-67 agrB KOT May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor
GEMLOGGD_02483 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
GEMLOGGD_02485 6.1e-202 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GEMLOGGD_02486 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GEMLOGGD_02487 8.7e-72 K Transcriptional regulator
GEMLOGGD_02488 0.0 spxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GEMLOGGD_02489 1.1e-71 yueI S Protein of unknown function (DUF1694)
GEMLOGGD_02490 2.5e-83 S Membrane
GEMLOGGD_02491 5.8e-31 S Membrane
GEMLOGGD_02492 1.2e-165 rhaD 4.1.2.17, 4.1.2.19, 5.1.3.4 H Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
GEMLOGGD_02493 1.3e-256 rhaA 2.7.1.5, 5.3.1.14 G L-rhamnose isomerase (RhaA)
GEMLOGGD_02494 5e-56 rhaM 5.1.3.32 G Involved in the anomeric conversion of L-rhamnose
GEMLOGGD_02495 1.8e-286 rhaB 2.7.1.12, 2.7.1.16, 2.7.1.5, 5.3.1.14 F Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
GEMLOGGD_02496 7.8e-244 iolF EGP Major facilitator Superfamily
GEMLOGGD_02497 1.9e-178 rhaR K helix_turn_helix, arabinose operon control protein
GEMLOGGD_02498 1e-139 K DeoR C terminal sensor domain
GEMLOGGD_02499 7.6e-42 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GEMLOGGD_02500 1.1e-94 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GEMLOGGD_02501 6.9e-146 L COG3547 Transposase and inactivated derivatives
GEMLOGGD_02502 5.5e-289 clcA P chloride
GEMLOGGD_02503 1.1e-193 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GEMLOGGD_02504 9.1e-77 L Transposase DDE domain
GEMLOGGD_02505 1.8e-68 L Putative transposase of IS4/5 family (DUF4096)
GEMLOGGD_02506 2.1e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GEMLOGGD_02507 4.7e-106 L Resolvase, N terminal domain
GEMLOGGD_02508 2.3e-113 L hmm pf00665
GEMLOGGD_02509 3e-181 1.17.4.1 F Ribonucleotide reductase, small chain
GEMLOGGD_02510 8e-171 nrdF 1.17.4.1 F Ribonucleotide reductase, small chain
GEMLOGGD_02511 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GEMLOGGD_02512 4.7e-81 nrdI F NrdI Flavodoxin like
GEMLOGGD_02514 3.4e-61 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GEMLOGGD_02515 4e-19 K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_02516 2.5e-152
GEMLOGGD_02517 6.9e-35 S Cell surface protein
GEMLOGGD_02520 2.1e-08 L Helix-turn-helix domain
GEMLOGGD_02521 2.5e-10 L Helix-turn-helix domain
GEMLOGGD_02522 5.9e-17 K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_02523 7.5e-19 M Bacterial Ig-like domain (group 3)
GEMLOGGD_02524 4.3e-09 3.4.21.72 M Bacterial Ig-like domain (group 3)
GEMLOGGD_02525 2e-07 D Mycoplasma protein of unknown function, DUF285
GEMLOGGD_02527 1.7e-51 K helix_turn_helix, arabinose operon control protein
GEMLOGGD_02528 5.3e-40 L Transposase
GEMLOGGD_02529 2.4e-22 L Transposase
GEMLOGGD_02530 8e-18 L Transposase
GEMLOGGD_02531 4.6e-66 M Bacterial Ig-like domain (group 3)
GEMLOGGD_02532 2.6e-105 M Glycosyl hydrolases family 25
GEMLOGGD_02533 5.4e-74 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
GEMLOGGD_02534 1.9e-285 bgl 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_02535 3.9e-159 ypbG 2.7.1.2 GK ROK family
GEMLOGGD_02536 0.0 mngB 2.3.1.204, 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
GEMLOGGD_02537 3.1e-253 S Metal-independent alpha-mannosidase (GH125)
GEMLOGGD_02538 1e-193 rliB K Transcriptional regulator
GEMLOGGD_02539 0.0 ypdD G Glycosyl hydrolase family 92
GEMLOGGD_02540 5.9e-216 msmX P Belongs to the ABC transporter superfamily
GEMLOGGD_02541 2.1e-165 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GEMLOGGD_02542 6.3e-271 yesN K helix_turn_helix, arabinose operon control protein
GEMLOGGD_02543 0.0 yesM 2.7.13.3 T Histidine kinase
GEMLOGGD_02544 4.1e-107 ypcB S integral membrane protein
GEMLOGGD_02545 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
GEMLOGGD_02546 2.8e-279 G Domain of unknown function (DUF3502)
GEMLOGGD_02547 1.3e-160 lplC U Binding-protein-dependent transport system inner membrane component
GEMLOGGD_02548 5.2e-181 U Binding-protein-dependent transport system inner membrane component
GEMLOGGD_02549 0.0 3.2.1.52 GH20 G Glycosyl hydrolase family 20, catalytic domain
GEMLOGGD_02550 6.5e-156 K AraC-like ligand binding domain
GEMLOGGD_02551 0.0 mdlA2 V ABC transporter
GEMLOGGD_02552 0.0 yknV V ABC transporter
GEMLOGGD_02553 8.4e-193 rliB K helix_turn_helix gluconate operon transcriptional repressor
GEMLOGGD_02554 6.8e-156 lrp QT PucR C-terminal helix-turn-helix domain
GEMLOGGD_02555 8.6e-63 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GEMLOGGD_02556 1e-174 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
GEMLOGGD_02557 2e-100 srlA G PTS system enzyme II sorbitol-specific factor
GEMLOGGD_02558 1.1e-86 gutM K Glucitol operon activator protein (GutM)
GEMLOGGD_02559 0.0 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
GEMLOGGD_02560 1.5e-144 IQ NAD dependent epimerase/dehydratase family
GEMLOGGD_02561 2.7e-160 rbsU U ribose uptake protein RbsU
GEMLOGGD_02562 7.9e-67 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
GEMLOGGD_02563 2.3e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GEMLOGGD_02564 5.9e-188 rbsR K helix_turn _helix lactose operon repressor
GEMLOGGD_02565 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GEMLOGGD_02566 2.7e-79 T Universal stress protein family
GEMLOGGD_02567 2.2e-99 padR K Virulence activator alpha C-term
GEMLOGGD_02568 1.7e-104 padC Q Phenolic acid decarboxylase
GEMLOGGD_02569 5.5e-144 tesE Q hydratase
GEMLOGGD_02570 2.2e-87 yjaB_1 K Acetyltransferase (GNAT) domain
GEMLOGGD_02571 1e-156 degV S DegV family
GEMLOGGD_02572 2.4e-58 2.6.1.2, 2.6.1.66 K Bacteriophage CI repressor helix-turn-helix domain
GEMLOGGD_02573 2.8e-254 pepC 3.4.22.40 E aminopeptidase
GEMLOGGD_02575 1.2e-108 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GEMLOGGD_02576 3.8e-303
GEMLOGGD_02578 1.2e-159 S Bacterial protein of unknown function (DUF916)
GEMLOGGD_02579 6.9e-93 S Cell surface protein
GEMLOGGD_02580 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GEMLOGGD_02581 4.6e-255 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GEMLOGGD_02582 2.5e-130 jag S R3H domain protein
GEMLOGGD_02583 9.3e-239 Q Imidazolonepropionase and related amidohydrolases
GEMLOGGD_02584 5e-309 E ABC transporter, substratebinding protein
GEMLOGGD_02585 1.8e-105 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GEMLOGGD_02586 6.4e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GEMLOGGD_02587 9.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GEMLOGGD_02588 2e-208 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GEMLOGGD_02589 5e-37 yaaA S S4 domain protein YaaA
GEMLOGGD_02590 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GEMLOGGD_02591 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GEMLOGGD_02592 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GEMLOGGD_02593 1.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
GEMLOGGD_02594 6.8e-62 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GEMLOGGD_02595 6.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GEMLOGGD_02596 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GEMLOGGD_02597 1.4e-67 rplI J Binds to the 23S rRNA
GEMLOGGD_02598 7.8e-242 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GEMLOGGD_02599 2e-225 yttB EGP Major facilitator Superfamily
GEMLOGGD_02600 3.6e-143 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GEMLOGGD_02601 5e-229 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GEMLOGGD_02602 1.2e-275 E ABC transporter, substratebinding protein
GEMLOGGD_02604 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GEMLOGGD_02605 1.5e-214 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GEMLOGGD_02606 6.3e-197 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
GEMLOGGD_02607 3.1e-278 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
GEMLOGGD_02608 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GEMLOGGD_02609 3.8e-303 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
GEMLOGGD_02611 4.5e-143 S haloacid dehalogenase-like hydrolase
GEMLOGGD_02612 1e-119 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
GEMLOGGD_02613 0.0 trePP 2.4.1.216, 2.4.1.8, 3.1.3.12, 3.2.1.28 GH37,GH65 G Glycosyl hydrolase family 65 central catalytic domain
GEMLOGGD_02614 1.3e-78 S Pyridoxamine 5'-phosphate oxidase
GEMLOGGD_02615 1.6e-31 cspA K Cold shock protein domain
GEMLOGGD_02616 1.7e-37
GEMLOGGD_02618 6.2e-131 K response regulator
GEMLOGGD_02619 0.0 vicK 2.7.13.3 T Histidine kinase
GEMLOGGD_02620 2e-244 yycH S YycH protein
GEMLOGGD_02621 2.9e-151 yycI S YycH protein
GEMLOGGD_02622 8.9e-158 vicX 3.1.26.11 S domain protein
GEMLOGGD_02623 6.8e-173 htrA 3.4.21.107 O serine protease
GEMLOGGD_02624 1.2e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GEMLOGGD_02625 7.6e-95 K Bacterial regulatory proteins, tetR family
GEMLOGGD_02626 1.5e-31 calB 1.2.1.68 C Belongs to the aldehyde dehydrogenase family
GEMLOGGD_02627 4.1e-76
GEMLOGGD_02629 1e-223 traK U TraM recognition site of TraD and TraG
GEMLOGGD_02630 2e-66
GEMLOGGD_02631 5.7e-43 CO COG0526, thiol-disulfide isomerase and thioredoxins
GEMLOGGD_02632 1.8e-54
GEMLOGGD_02633 6.6e-162 M CHAP domain
GEMLOGGD_02634 1.6e-231 polC 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 S WXG100 protein secretion system (Wss), protein YukC
GEMLOGGD_02635 0.0 traE U Psort location Cytoplasmic, score
GEMLOGGD_02636 1.4e-116
GEMLOGGD_02637 7.8e-37
GEMLOGGD_02638 5.7e-50 S Cag pathogenicity island, type IV secretory system
GEMLOGGD_02639 3e-81
GEMLOGGD_02640 2.6e-14
GEMLOGGD_02641 0.0 L MobA MobL family protein
GEMLOGGD_02642 9.4e-27
GEMLOGGD_02643 2.6e-40
GEMLOGGD_02644 5.4e-84
GEMLOGGD_02645 9.6e-43 relB L Addiction module antitoxin, RelB DinJ family
GEMLOGGD_02646 1.2e-82 repA S Replication initiator protein A
GEMLOGGD_02647 9e-49 repA S Replication initiator protein A
GEMLOGGD_02648 4.3e-245 cycA E Amino acid permease
GEMLOGGD_02650 8.3e-37 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GEMLOGGD_02651 2.7e-143 D CobQ CobB MinD ParA nucleotide binding domain protein
GEMLOGGD_02653 2.1e-36 L Transposase and inactivated derivatives, IS30 family
GEMLOGGD_02655 2.4e-124 tnp L DDE domain
GEMLOGGD_02656 8.3e-94 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GEMLOGGD_02657 5.2e-168 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
GEMLOGGD_02658 0.0 L MobA MobL family protein
GEMLOGGD_02659 5.5e-27
GEMLOGGD_02660 1.5e-40
GEMLOGGD_02661 2.3e-82
GEMLOGGD_02662 1.1e-43 relB L Addiction module antitoxin, RelB DinJ family
GEMLOGGD_02664 3.8e-98 soj D CobQ CobB MinD ParA nucleotide binding domain protein
GEMLOGGD_02665 4.6e-11
GEMLOGGD_02666 6.3e-176 L Transposase and inactivated derivatives, IS30 family
GEMLOGGD_02667 9.8e-188 L PFAM Integrase catalytic region
GEMLOGGD_02668 1.6e-99 gbuC E glycine betaine
GEMLOGGD_02669 5.3e-113 proW E glycine betaine
GEMLOGGD_02670 9.6e-185 gbuA 3.6.1.1, 3.6.3.32 E glycine betaine
GEMLOGGD_02671 7.7e-188 L Helix-turn-helix domain
GEMLOGGD_02672 2.5e-95 tnpR1 L Resolvase, N terminal domain
GEMLOGGD_02673 4.8e-57 K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_02674 0.0 kup P Transport of potassium into the cell
GEMLOGGD_02675 5e-64 KT Transcriptional regulatory protein, C terminal
GEMLOGGD_02676 3.8e-181 T PhoQ Sensor
GEMLOGGD_02677 5.2e-38 kdpC 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
GEMLOGGD_02678 1.3e-253 kdpB 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
GEMLOGGD_02679 2.1e-175 kdpA 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
GEMLOGGD_02681 1.3e-28 4.6.1.1 T Pfam Adenylate and Guanylate cyclase catalytic domain
GEMLOGGD_02683 1.1e-250 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
GEMLOGGD_02684 2.3e-53
GEMLOGGD_02685 5.1e-66
GEMLOGGD_02686 1.3e-10 S Protein of unknown function (DUF3800)
GEMLOGGD_02687 1.1e-125 L Psort location Cytoplasmic, score
GEMLOGGD_02688 9.7e-67 gcvH E Glycine cleavage H-protein
GEMLOGGD_02689 7.4e-177 sepS16B
GEMLOGGD_02690 1.3e-131
GEMLOGGD_02691 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
GEMLOGGD_02692 6.8e-57
GEMLOGGD_02693 8.9e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GEMLOGGD_02694 1.4e-77 elaA S GNAT family
GEMLOGGD_02695 1.7e-75 K Transcriptional regulator
GEMLOGGD_02696 7.8e-227 ndh 1.6.99.3 C NADH dehydrogenase
GEMLOGGD_02697 2.6e-37
GEMLOGGD_02698 2.5e-08 S Motility quorum-sensing regulator, toxin of MqsA
GEMLOGGD_02699 2.2e-30
GEMLOGGD_02700 7.1e-21 U Preprotein translocase subunit SecB
GEMLOGGD_02701 4e-206 potD P ABC transporter
GEMLOGGD_02702 3.4e-141 potC P ABC transporter permease
GEMLOGGD_02703 2.7e-149 potB P ABC transporter permease
GEMLOGGD_02704 3.5e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GEMLOGGD_02705 3.8e-96 puuR K Cupin domain
GEMLOGGD_02706 1.1e-83 6.3.3.2 S ASCH
GEMLOGGD_02707 1e-84 K GNAT family
GEMLOGGD_02708 2.6e-89 K acetyltransferase
GEMLOGGD_02709 8.1e-22
GEMLOGGD_02710 1.4e-59 ytrA K helix_turn_helix gluconate operon transcriptional repressor
GEMLOGGD_02711 2e-163 ytrB V ABC transporter
GEMLOGGD_02712 3.2e-189
GEMLOGGD_02713 1.1e-256 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
GEMLOGGD_02714 2.8e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GEMLOGGD_02715 2.4e-300 ybeC E amino acid
GEMLOGGD_02716 1.3e-193 L Transposase and inactivated derivatives, IS30 family
GEMLOGGD_02717 5.9e-103 tnpR L Resolvase, N terminal domain
GEMLOGGD_02718 6.1e-40
GEMLOGGD_02719 0.0 V Type II restriction enzyme, methylase subunits
GEMLOGGD_02720 8.9e-41 K Helix-turn-helix domain
GEMLOGGD_02721 2.8e-63 S Phage derived protein Gp49-like (DUF891)
GEMLOGGD_02723 3e-15 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
GEMLOGGD_02724 1.6e-176 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
GEMLOGGD_02725 2e-72 L Transposase IS66 family
GEMLOGGD_02726 1.1e-144 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GEMLOGGD_02727 1.3e-101 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
GEMLOGGD_02728 8.5e-159 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
GEMLOGGD_02729 1.1e-61 K Bacterial regulatory proteins, tetR family
GEMLOGGD_02730 8.5e-76 L PFAM Integrase catalytic region
GEMLOGGD_02731 1.8e-128 L Psort location Cytoplasmic, score
GEMLOGGD_02734 1.4e-18
GEMLOGGD_02735 3e-30 S Phage terminase, small subunit
GEMLOGGD_02736 2.1e-249 terL S overlaps another CDS with the same product name
GEMLOGGD_02738 8e-111 S Phage portal protein
GEMLOGGD_02739 6.5e-186 S Phage capsid family
GEMLOGGD_02741 5.6e-12
GEMLOGGD_02744 4e-19 3.4.21.88 K Transcriptional
GEMLOGGD_02746 2.4e-08 E Zn peptidase
GEMLOGGD_02747 8.1e-24 S Short C-terminal domain
GEMLOGGD_02748 1.4e-21 S Short C-terminal domain
GEMLOGGD_02750 1.4e-97 S KilA-N domain
GEMLOGGD_02752 3.8e-93 L Belongs to the 'phage' integrase family
GEMLOGGD_02753 1.5e-42 S COG NOG38524 non supervised orthologous group
GEMLOGGD_02754 9.2e-71 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
GEMLOGGD_02755 2.3e-240 xylP1 G MFS/sugar transport protein
GEMLOGGD_02756 3e-122 qmcA O prohibitin homologues
GEMLOGGD_02757 1.5e-29
GEMLOGGD_02758 5e-281 pipD E Dipeptidase
GEMLOGGD_02759 3e-40
GEMLOGGD_02760 6.8e-96 bioY S BioY family
GEMLOGGD_02761 2.7e-177 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GEMLOGGD_02762 1.9e-60 S CHY zinc finger
GEMLOGGD_02763 6.3e-224 mtnE 2.6.1.83 E Aminotransferase
GEMLOGGD_02764 2.2e-218
GEMLOGGD_02765 3.5e-154 tagG U Transport permease protein
GEMLOGGD_02766 1e-201 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
GEMLOGGD_02767 3.8e-44
GEMLOGGD_02768 3.9e-93 K Transcriptional regulator PadR-like family
GEMLOGGD_02769 2.1e-258 P Major Facilitator Superfamily
GEMLOGGD_02770 2.5e-242 amtB P ammonium transporter
GEMLOGGD_02771 7.5e-180 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GEMLOGGD_02772 3.7e-44
GEMLOGGD_02773 6.3e-102 zmp1 O Zinc-dependent metalloprotease
GEMLOGGD_02774 2.3e-119 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
GEMLOGGD_02775 3.1e-310 mco Q Multicopper oxidase
GEMLOGGD_02776 3.2e-54 ypaA S Protein of unknown function (DUF1304)
GEMLOGGD_02777 8.8e-95 yxkA S Phosphatidylethanolamine-binding protein
GEMLOGGD_02778 1.1e-231 flhF N Uncharacterized conserved protein (DUF2075)
GEMLOGGD_02779 9.3e-83 ywnA K Winged helix-turn-helix transcription repressor, HrcA DNA-binding
GEMLOGGD_02780 9.3e-80
GEMLOGGD_02781 1.4e-69 accB 2.3.1.12 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GEMLOGGD_02782 7.7e-174 rihC 3.2.2.1 F Nucleoside
GEMLOGGD_02783 3e-162 vdlC S Belongs to the short-chain dehydrogenases reductases (SDR) family
GEMLOGGD_02784 1.8e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GEMLOGGD_02785 9.9e-180 proV E ABC transporter, ATP-binding protein
GEMLOGGD_02786 2.6e-255 gshR 1.8.1.7 C Glutathione reductase
GEMLOGGD_02787 1.3e-300 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GEMLOGGD_02788 0.0 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
GEMLOGGD_02789 3e-133 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GEMLOGGD_02790 0.0 M domain protein
GEMLOGGD_02791 3.4e-32 M dTDP-4-dehydrorhamnose reductase activity
GEMLOGGD_02792 1.4e-175
GEMLOGGD_02793 6.5e-33
GEMLOGGD_02794 1.7e-39
GEMLOGGD_02795 1.2e-64
GEMLOGGD_02796 5.6e-68 S Immunity protein 63
GEMLOGGD_02797 2.4e-38
GEMLOGGD_02798 9.6e-120 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GEMLOGGD_02799 4.8e-197 uhpT EGP Major facilitator Superfamily
GEMLOGGD_02800 6.9e-147 3.1.3.102, 3.1.3.104 G Sucrose-6F-phosphate phosphohydrolase
GEMLOGGD_02801 3.3e-166 K Transcriptional regulator
GEMLOGGD_02802 1.4e-150 S hydrolase
GEMLOGGD_02803 3.2e-256 brnQ U Component of the transport system for branched-chain amino acids
GEMLOGGD_02804 2.1e-208 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GEMLOGGD_02806 7.2e-32
GEMLOGGD_02807 2.9e-17 plnR
GEMLOGGD_02808 1.7e-117
GEMLOGGD_02809 5.2e-23 plnK
GEMLOGGD_02810 3.5e-24 plnJ
GEMLOGGD_02811 2.8e-28
GEMLOGGD_02813 3.9e-226 M Glycosyl transferase family 2
GEMLOGGD_02814 7e-117 plnP S CAAX protease self-immunity
GEMLOGGD_02815 8.4e-27
GEMLOGGD_02816 2.1e-17 plnA
GEMLOGGD_02817 1e-235 plnB 2.7.13.3 T GHKL domain
GEMLOGGD_02818 9.1e-133 plnC K LytTr DNA-binding domain
GEMLOGGD_02819 3.7e-134 plnD K LytTr DNA-binding domain
GEMLOGGD_02820 2.2e-129 S CAAX protease self-immunity
GEMLOGGD_02821 2.4e-22 plnF
GEMLOGGD_02822 6.7e-23
GEMLOGGD_02823 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GEMLOGGD_02824 1.4e-243 mesE M Transport protein ComB
GEMLOGGD_02825 2.1e-94 S CAAX protease self-immunity
GEMLOGGD_02826 1.6e-120 ypbD S CAAX protease self-immunity
GEMLOGGD_02827 4.7e-112 V CAAX protease self-immunity
GEMLOGGD_02828 1e-114 S CAAX protease self-immunity
GEMLOGGD_02829 2.6e-29
GEMLOGGD_02830 0.0 helD 3.6.4.12 L DNA helicase
GEMLOGGD_02831 1.2e-140 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
GEMLOGGD_02832 2.6e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GEMLOGGD_02833 9e-130 K UbiC transcription regulator-associated domain protein
GEMLOGGD_02834 1.9e-253 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_02835 3.9e-24
GEMLOGGD_02836 2.6e-76 S Domain of unknown function (DUF3284)
GEMLOGGD_02837 1.5e-250 chbC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GEMLOGGD_02838 7.3e-296 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_02839 1e-162 GK ROK family
GEMLOGGD_02840 4.1e-133 K Helix-turn-helix domain, rpiR family
GEMLOGGD_02841 8.1e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GEMLOGGD_02842 1.1e-206
GEMLOGGD_02843 3.5e-151 S Psort location Cytoplasmic, score
GEMLOGGD_02844 8.2e-168 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GEMLOGGD_02845 4e-229 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
GEMLOGGD_02846 3.1e-178
GEMLOGGD_02847 8.6e-133 cobB K SIR2 family
GEMLOGGD_02848 2e-160 yunF F Protein of unknown function DUF72
GEMLOGGD_02849 5.2e-71 mutT 3.6.1.55 F DNA mismatch repair protein MutT
GEMLOGGD_02850 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GEMLOGGD_02851 9.2e-212 bcr1 EGP Major facilitator Superfamily
GEMLOGGD_02852 1.5e-146 tatD L hydrolase, TatD family
GEMLOGGD_02853 2.6e-95 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GEMLOGGD_02854 3.9e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GEMLOGGD_02855 3.2e-37 veg S Biofilm formation stimulator VEG
GEMLOGGD_02856 1.5e-163 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GEMLOGGD_02857 1.3e-181 S Prolyl oligopeptidase family
GEMLOGGD_02858 9.8e-129 fhuC 3.6.3.35 P ABC transporter
GEMLOGGD_02859 9.2e-131 znuB U ABC 3 transport family
GEMLOGGD_02860 6.4e-43 ankB S ankyrin repeats
GEMLOGGD_02861 2.1e-31
GEMLOGGD_02862 6.6e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
GEMLOGGD_02863 1.2e-207 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GEMLOGGD_02864 1.8e-150 bla1 3.5.2.6 V Beta-lactamase enzyme family
GEMLOGGD_02865 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GEMLOGGD_02866 2.4e-184 S DUF218 domain
GEMLOGGD_02867 2.2e-126
GEMLOGGD_02868 3.7e-148 yxeH S hydrolase
GEMLOGGD_02869 9e-264 ywfO S HD domain protein
GEMLOGGD_02870 3.3e-155 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
GEMLOGGD_02871 3.8e-78 ywiB S Domain of unknown function (DUF1934)
GEMLOGGD_02872 4e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GEMLOGGD_02873 3.4e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GEMLOGGD_02874 1.7e-243 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GEMLOGGD_02875 6.8e-229 tdcC E amino acid
GEMLOGGD_02876 3.7e-122 sdaAB 4.3.1.17 E Serine dehydratase beta chain
GEMLOGGD_02877 2.2e-157 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GEMLOGGD_02878 6.4e-131 S YheO-like PAS domain
GEMLOGGD_02879 2.5e-26
GEMLOGGD_02880 3.6e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GEMLOGGD_02881 3e-240 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GEMLOGGD_02882 7.8e-41 rpmE2 J Ribosomal protein L31
GEMLOGGD_02883 9.4e-214 J translation release factor activity
GEMLOGGD_02884 9.2e-127 srtA 3.4.22.70 M sortase family
GEMLOGGD_02885 1.7e-91 lemA S LemA family
GEMLOGGD_02886 1e-138 htpX O Belongs to the peptidase M48B family
GEMLOGGD_02887 2e-146
GEMLOGGD_02888 1.2e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GEMLOGGD_02889 6.6e-258 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GEMLOGGD_02890 1e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GEMLOGGD_02891 1.7e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GEMLOGGD_02892 1.6e-64 ndoA L Toxic component of a toxin-antitoxin (TA) module
GEMLOGGD_02893 0.0 kup P Transport of potassium into the cell
GEMLOGGD_02894 2.9e-193 P ABC transporter, substratebinding protein
GEMLOGGD_02895 9.8e-130 ssuC2 U Binding-protein-dependent transport system inner membrane component
GEMLOGGD_02896 5e-134 P ATPases associated with a variety of cellular activities
GEMLOGGD_02897 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GEMLOGGD_02898 1.7e-204 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GEMLOGGD_02899 7.2e-189 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GEMLOGGD_02900 2.6e-230 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GEMLOGGD_02901 9.4e-130 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
GEMLOGGD_02902 1.4e-217 argD 2.6.1.11, 2.6.1.17 E acetylornithine
GEMLOGGD_02903 3.6e-188 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GEMLOGGD_02904 1.2e-83 S QueT transporter
GEMLOGGD_02905 3.1e-170 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
GEMLOGGD_02906 2.1e-123 pepL 3.4.11.5 E Releases the N-terminal proline from various substrates
GEMLOGGD_02907 2.1e-114 S (CBS) domain
GEMLOGGD_02908 1.4e-264 S Putative peptidoglycan binding domain
GEMLOGGD_02909 3.5e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GEMLOGGD_02910 1.5e-100 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GEMLOGGD_02911 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GEMLOGGD_02912 7.3e-289 yabM S Polysaccharide biosynthesis protein
GEMLOGGD_02913 2.2e-42 yabO J S4 domain protein
GEMLOGGD_02915 1.1e-63 divIC D Septum formation initiator
GEMLOGGD_02916 3.1e-74 yabR J RNA binding
GEMLOGGD_02917 1.1e-253 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GEMLOGGD_02918 1.7e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GEMLOGGD_02919 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GEMLOGGD_02920 1.2e-163 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GEMLOGGD_02921 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GEMLOGGD_02922 3e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GEMLOGGD_02925 3e-252 dtpT U amino acid peptide transporter
GEMLOGGD_02926 2e-151 yjjH S Calcineurin-like phosphoesterase
GEMLOGGD_02930 1.2e-49 5.3.3.19 S Cupin 2, conserved barrel domain protein
GEMLOGGD_02931 3.2e-53 S Cupin domain
GEMLOGGD_02932 1.1e-166 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
GEMLOGGD_02933 7.5e-192 ybiR P Citrate transporter
GEMLOGGD_02934 2.4e-150 pnuC H nicotinamide mononucleotide transporter
GEMLOGGD_02935 1.7e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GEMLOGGD_02936 6.1e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GEMLOGGD_02937 1.6e-123 gntR1 K UbiC transcription regulator-associated domain protein
GEMLOGGD_02938 1.3e-136 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GEMLOGGD_02939 5.2e-289 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GEMLOGGD_02940 4.7e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GEMLOGGD_02941 0.0 pacL 3.6.3.8 P P-type ATPase
GEMLOGGD_02942 8.9e-72
GEMLOGGD_02943 0.0 yhgF K Tex-like protein N-terminal domain protein
GEMLOGGD_02944 1.8e-80 ydcK S Belongs to the SprT family
GEMLOGGD_02945 4e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
GEMLOGGD_02946 1.4e-156 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GEMLOGGD_02948 4.9e-09 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
GEMLOGGD_02949 4.2e-20
GEMLOGGD_02950 0.0 ybfG M peptidoglycan-binding domain-containing protein
GEMLOGGD_02953 2.4e-160 G Peptidase_C39 like family
GEMLOGGD_02954 1.3e-168 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
GEMLOGGD_02955 3.4e-133 manY G PTS system
GEMLOGGD_02956 3.6e-171 manN G system, mannose fructose sorbose family IID component
GEMLOGGD_02957 4.7e-64 S Domain of unknown function (DUF956)
GEMLOGGD_02958 0.0 levR K Sigma-54 interaction domain
GEMLOGGD_02959 8.6e-72 pts10A 2.7.1.191 G PTS system fructose IIA component
GEMLOGGD_02960 3.1e-87 pts10B 2.7.1.191, 2.7.1.202 G PTS system sorbose subfamily IIB component
GEMLOGGD_02961 4.6e-177 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GEMLOGGD_02962 9.7e-65 accB 2.3.1.12 I Biotin-requiring enzyme
GEMLOGGD_02963 7.5e-247 accC2 6.3.4.14, 6.4.1.2 I Biotin carboxylase C-terminal domain
GEMLOGGD_02964 9.8e-141 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GEMLOGGD_02965 1.8e-136 accA 2.1.3.15, 6.4.1.2 I Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
GEMLOGGD_02966 4.9e-168 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GEMLOGGD_02967 3.3e-167 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
GEMLOGGD_02968 1.7e-177 EG EamA-like transporter family
GEMLOGGD_02969 2.5e-129 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GEMLOGGD_02970 1.1e-112 zmp2 O Zinc-dependent metalloprotease
GEMLOGGD_02971 7.3e-258 pepC 3.4.22.40 E Peptidase C1-like family
GEMLOGGD_02972 3.2e-124 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GEMLOGGD_02973 1.2e-51 HA62_12640 S GCN5-related N-acetyl-transferase
GEMLOGGD_02974 2.1e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
GEMLOGGD_02975 1.3e-257 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GEMLOGGD_02976 3.7e-205 yacL S domain protein
GEMLOGGD_02977 8.9e-289 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GEMLOGGD_02978 2e-269 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GEMLOGGD_02979 3.5e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GEMLOGGD_02980 3.3e-138 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GEMLOGGD_02981 5.3e-98 yacP S YacP-like NYN domain
GEMLOGGD_02982 1.2e-100 sigH K Sigma-70 region 2
GEMLOGGD_02983 6.5e-22 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GEMLOGGD_02984 6.8e-29 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GEMLOGGD_02985 1.4e-98 nusG K Participates in transcription elongation, termination and antitermination
GEMLOGGD_02986 1.1e-158 S Alpha/beta hydrolase of unknown function (DUF915)
GEMLOGGD_02987 2.4e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GEMLOGGD_02988 5.1e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GEMLOGGD_02989 4.6e-80 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GEMLOGGD_02990 9.9e-56 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GEMLOGGD_02992 1.2e-230 L Belongs to the 'phage' integrase family
GEMLOGGD_02995 8.9e-33
GEMLOGGD_02998 1.6e-09 M LysM domain
GEMLOGGD_03000 2.7e-12 E IrrE N-terminal-like domain
GEMLOGGD_03001 1.3e-40 S protein disulfide oxidoreductase activity
GEMLOGGD_03002 5.6e-13
GEMLOGGD_03008 3.5e-97
GEMLOGGD_03011 2.9e-26
GEMLOGGD_03012 1.1e-09 S Domain of unknown function (DUF1508)
GEMLOGGD_03013 2.6e-32
GEMLOGGD_03014 2.5e-153 recT L RecT family
GEMLOGGD_03015 7.1e-139 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
GEMLOGGD_03016 2.5e-148 3.1.3.16 L DnaD domain protein
GEMLOGGD_03017 1.6e-48
GEMLOGGD_03018 1e-64 ps308 K AntA/AntB antirepressor
GEMLOGGD_03019 2.4e-63
GEMLOGGD_03020 5.9e-64 rusA 3.1.22.4 L Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
GEMLOGGD_03024 1.7e-81 arpU S Phage transcriptional regulator, ArpU family
GEMLOGGD_03027 3.3e-17
GEMLOGGD_03028 2.2e-17
GEMLOGGD_03029 3.6e-48 L transposase activity
GEMLOGGD_03030 4.6e-188 S Phage terminase, large subunit, PBSX family
GEMLOGGD_03031 7.5e-113 S Phage portal protein, SPP1 Gp6-like
GEMLOGGD_03032 3.3e-36 S Phage minor capsid protein 2
GEMLOGGD_03033 7.7e-09 S Phage minor capsid protein 2
GEMLOGGD_03035 7.5e-108
GEMLOGGD_03036 7.1e-08
GEMLOGGD_03037 1.2e-14
GEMLOGGD_03040 3.3e-10 S Minor capsid protein from bacteriophage
GEMLOGGD_03041 1.5e-35 N domain, Protein
GEMLOGGD_03043 8.1e-13 S Bacteriophage Gp15 protein
GEMLOGGD_03044 1.9e-153 M Phage tail tape measure protein TP901
GEMLOGGD_03045 6.4e-47 S Phage tail protein
GEMLOGGD_03046 1.8e-100 S Prophage endopeptidase tail
GEMLOGGD_03049 3.9e-75 S Calcineurin-like phosphoesterase
GEMLOGGD_03052 5e-63
GEMLOGGD_03053 2.9e-23
GEMLOGGD_03054 1.2e-200 lys M Glycosyl hydrolases family 25
GEMLOGGD_03055 1.1e-35 S Haemolysin XhlA
GEMLOGGD_03058 2.3e-36 K acetyltransferase
GEMLOGGD_03059 2.4e-47 V Abi-like protein
GEMLOGGD_03060 2.7e-177 F DNA/RNA non-specific endonuclease
GEMLOGGD_03061 1.5e-38 L nuclease
GEMLOGGD_03062 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GEMLOGGD_03063 4.6e-108 yvdD 3.2.2.10 S Belongs to the LOG family
GEMLOGGD_03064 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GEMLOGGD_03065 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GEMLOGGD_03066 6.5e-37 nrdH O Glutaredoxin
GEMLOGGD_03067 3.4e-109 rsmC 2.1.1.172 J Methyltransferase
GEMLOGGD_03068 5.9e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GEMLOGGD_03069 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GEMLOGGD_03070 5.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GEMLOGGD_03071 7.4e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GEMLOGGD_03072 2.2e-38 yaaL S Protein of unknown function (DUF2508)
GEMLOGGD_03073 8.7e-119 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GEMLOGGD_03074 2.4e-53 yaaQ S Cyclic-di-AMP receptor
GEMLOGGD_03075 9.7e-186 holB 2.7.7.7 L DNA polymerase III
GEMLOGGD_03076 1e-57 yabA L Involved in initiation control of chromosome replication
GEMLOGGD_03077 5.4e-164 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GEMLOGGD_03078 2.1e-148 fat 3.1.2.21 I Acyl-ACP thioesterase
GEMLOGGD_03079 2e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GEMLOGGD_03080 6.1e-210 phnW 2.5.1.49, 2.6.1.37, 3.11.1.1 E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily
GEMLOGGD_03081 6.5e-145 phnX 2.6.1.37, 3.1.3.18, 3.11.1.1 E Belongs to the HAD-like hydrolase superfamily. PhnX family
GEMLOGGD_03082 2.6e-144 phnE1 3.6.1.63 U ABC transporter permease
GEMLOGGD_03083 2.3e-137 phnE 3.6.1.63 U Phosphonate ABC transporter permease
GEMLOGGD_03084 9.7e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GEMLOGGD_03085 1.9e-189 phnD P Phosphonate ABC transporter
GEMLOGGD_03086 1.7e-128 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
GEMLOGGD_03087 6.7e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
GEMLOGGD_03088 3.8e-81 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
GEMLOGGD_03089 1.4e-195 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GEMLOGGD_03090 5.7e-307 uup S ABC transporter, ATP-binding protein
GEMLOGGD_03091 1.4e-119 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GEMLOGGD_03092 4.6e-109 ydiL S CAAX protease self-immunity
GEMLOGGD_03093 1e-31 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GEMLOGGD_03094 8.5e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GEMLOGGD_03095 0.0 ydaO E amino acid
GEMLOGGD_03096 2.7e-181 tagO 2.7.8.33, 2.7.8.35 M transferase
GEMLOGGD_03097 4.3e-145 pstS P Phosphate
GEMLOGGD_03098 5.7e-115 yvyE 3.4.13.9 S YigZ family
GEMLOGGD_03099 1.5e-258 comFA L Helicase C-terminal domain protein
GEMLOGGD_03100 7.5e-126 comFC S Competence protein
GEMLOGGD_03101 3.5e-100 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GEMLOGGD_03102 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GEMLOGGD_03103 3.2e-203 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GEMLOGGD_03104 1.2e-216 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
GEMLOGGD_03105 1.5e-132 K response regulator
GEMLOGGD_03106 9.2e-251 phoR 2.7.13.3 T Histidine kinase
GEMLOGGD_03107 3e-151 pstS P Phosphate
GEMLOGGD_03108 6.8e-162 pstC P probably responsible for the translocation of the substrate across the membrane
GEMLOGGD_03109 1.5e-155 pstA P Phosphate transport system permease protein PstA
GEMLOGGD_03110 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GEMLOGGD_03111 1e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GEMLOGGD_03112 8.3e-117 phoU P Plays a role in the regulation of phosphate uptake
GEMLOGGD_03113 5.8e-49 pspC KT positive regulation of macromolecule biosynthetic process
GEMLOGGD_03114 9.2e-54 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GEMLOGGD_03115 1.4e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GEMLOGGD_03116 1.9e-163 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GEMLOGGD_03117 8.5e-182 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GEMLOGGD_03118 2.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GEMLOGGD_03119 1.9e-124 yliE T Putative diguanylate phosphodiesterase
GEMLOGGD_03120 6.7e-270 nox C NADH oxidase
GEMLOGGD_03121 7.3e-163 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
GEMLOGGD_03122 3.6e-245
GEMLOGGD_03123 3.8e-205 S Protein conserved in bacteria
GEMLOGGD_03124 6.8e-218 ydaM M Glycosyl transferase family group 2
GEMLOGGD_03125 0.0 ydaN S Bacterial cellulose synthase subunit
GEMLOGGD_03126 1e-132 2.7.7.65 T diguanylate cyclase activity
GEMLOGGD_03127 1.7e-176 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GEMLOGGD_03128 2e-109 yviA S Protein of unknown function (DUF421)
GEMLOGGD_03129 1.1e-61 S Protein of unknown function (DUF3290)
GEMLOGGD_03130 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GEMLOGGD_03131 3.3e-132 yliE T Putative diguanylate phosphodiesterase
GEMLOGGD_03132 1.4e-259 nox S Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
GEMLOGGD_03133 1.1e-103 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
GEMLOGGD_03134 1.3e-210 norA EGP Major facilitator Superfamily
GEMLOGGD_03135 1.2e-117 yfbR S HD containing hydrolase-like enzyme
GEMLOGGD_03136 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GEMLOGGD_03137 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GEMLOGGD_03138 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GEMLOGGD_03139 1.8e-231 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GEMLOGGD_03140 1.1e-264 argH 4.3.2.1 E argininosuccinate lyase
GEMLOGGD_03141 9.3e-87 S Short repeat of unknown function (DUF308)
GEMLOGGD_03142 1.1e-161 rapZ S Displays ATPase and GTPase activities
GEMLOGGD_03143 2.9e-190 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GEMLOGGD_03144 3.7e-168 whiA K May be required for sporulation
GEMLOGGD_03145 4e-306 oppA E ABC transporter, substratebinding protein
GEMLOGGD_03146 1e-176 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GEMLOGGD_03147 3e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GEMLOGGD_03149 4.2e-245 rpoN K Sigma-54 factor, core binding domain
GEMLOGGD_03150 7.3e-189 cggR K Putative sugar-binding domain
GEMLOGGD_03151 2.6e-191 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GEMLOGGD_03152 8.1e-224 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GEMLOGGD_03153 1.2e-137 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GEMLOGGD_03154 1.6e-249 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GEMLOGGD_03155 4.1e-132
GEMLOGGD_03156 9.6e-294 clcA P chloride
GEMLOGGD_03157 1.2e-30 secG U Preprotein translocase
GEMLOGGD_03158 1.3e-139 est 3.1.1.1 S Serine aminopeptidase, S33
GEMLOGGD_03159 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GEMLOGGD_03160 9.3e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GEMLOGGD_03161 0.0 3.4.21.72 M Bacterial Ig-like domain (group 3)
GEMLOGGD_03162 1.5e-256 glnP P ABC transporter
GEMLOGGD_03163 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMLOGGD_03164 4.6e-105 yxjI
GEMLOGGD_03165 4.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
GEMLOGGD_03166 1.6e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GEMLOGGD_03167 1.4e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GEMLOGGD_03168 5e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
GEMLOGGD_03169 8.1e-88 2.3.1.128, 2.3.1.178 J Acetyltransferase (GNAT) domain
GEMLOGGD_03170 4.3e-100 dnaQ 2.7.7.7 L DNA polymerase III
GEMLOGGD_03171 2.8e-153 xth 3.1.11.2 L exodeoxyribonuclease III
GEMLOGGD_03172 1.9e-156 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
GEMLOGGD_03173 6.2e-168 murB 1.3.1.98 M Cell wall formation
GEMLOGGD_03174 0.0 yjcE P Sodium proton antiporter
GEMLOGGD_03175 1.3e-90 K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_03176 2.5e-121 S Protein of unknown function (DUF1361)
GEMLOGGD_03177 2.7e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GEMLOGGD_03178 1.6e-129 ybbR S YbbR-like protein
GEMLOGGD_03179 1.6e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GEMLOGGD_03180 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GEMLOGGD_03181 4.5e-123 yliE T EAL domain
GEMLOGGD_03182 6.4e-148 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
GEMLOGGD_03183 3.1e-104 K Bacterial regulatory proteins, tetR family
GEMLOGGD_03184 1.6e-207 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GEMLOGGD_03185 3.3e-52
GEMLOGGD_03186 3e-72
GEMLOGGD_03187 6.6e-131 1.5.1.39 C nitroreductase
GEMLOGGD_03188 4e-154 G Transmembrane secretion effector
GEMLOGGD_03189 2.8e-298 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GEMLOGGD_03190 8.6e-142
GEMLOGGD_03192 1.9e-71 spxA 1.20.4.1 P ArsC family
GEMLOGGD_03193 1.5e-33
GEMLOGGD_03194 1.1e-89 V VanZ like family
GEMLOGGD_03195 3.1e-174 EGP Major facilitator Superfamily
GEMLOGGD_03196 1.4e-28 EGP Major facilitator Superfamily
GEMLOGGD_03197 3.2e-175 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GEMLOGGD_03198 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GEMLOGGD_03199 1.8e-289 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GEMLOGGD_03200 5e-153 licD M LicD family
GEMLOGGD_03201 1.3e-82 K Transcriptional regulator
GEMLOGGD_03202 1.6e-18
GEMLOGGD_03203 1.2e-225 pbuG S permease
GEMLOGGD_03204 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GEMLOGGD_03205 7.8e-91 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GEMLOGGD_03206 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GEMLOGGD_03207 5.4e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
GEMLOGGD_03208 2e-180 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GEMLOGGD_03209 0.0 oatA I Acyltransferase
GEMLOGGD_03210 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GEMLOGGD_03211 5e-69 O OsmC-like protein
GEMLOGGD_03212 5.8e-46
GEMLOGGD_03213 8.2e-252 yfnA E Amino Acid
GEMLOGGD_03214 2.5e-88
GEMLOGGD_03215 5.5e-147 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GEMLOGGD_03216 4.6e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
GEMLOGGD_03217 1.8e-19
GEMLOGGD_03218 2e-103 gmk2 2.7.4.8 F Guanylate kinase
GEMLOGGD_03219 1.3e-81 zur P Belongs to the Fur family
GEMLOGGD_03220 7.1e-12 3.2.1.14 GH18
GEMLOGGD_03221 4.9e-148
GEMLOGGD_03222 8.8e-113 gph 3.1.3.18 S HAD hydrolase, family IA, variant
GEMLOGGD_03223 3e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
GEMLOGGD_03224 4.3e-170 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GEMLOGGD_03225 2e-39
GEMLOGGD_03227 9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GEMLOGGD_03228 7.8e-149 glnH ET ABC transporter substrate-binding protein
GEMLOGGD_03229 1.6e-109 gluC P ABC transporter permease
GEMLOGGD_03230 4e-108 glnP P ABC transporter permease
GEMLOGGD_03231 1e-84 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GEMLOGGD_03232 4.7e-154 K CAT RNA binding domain
GEMLOGGD_03233 1.8e-257 2.7.1.193, 2.7.1.211 G phosphotransferase system, EIIB
GEMLOGGD_03234 8.4e-142 G YdjC-like protein
GEMLOGGD_03235 2.1e-244 steT E amino acid
GEMLOGGD_03236 4.8e-73 mgrA K helix_turn_helix multiple antibiotic resistance protein
GEMLOGGD_03237 3.7e-149 XK27_00825 S Sulfite exporter TauE/SafE
GEMLOGGD_03238 2e-71 K MarR family
GEMLOGGD_03239 2.4e-209 EGP Major facilitator Superfamily
GEMLOGGD_03240 3.8e-85 S membrane transporter protein
GEMLOGGD_03241 7.1e-98 K Bacterial regulatory proteins, tetR family
GEMLOGGD_03242 8.7e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GEMLOGGD_03243 9.9e-79 3.6.1.55 F NUDIX domain
GEMLOGGD_03244 1.3e-48 sugE U Multidrug resistance protein
GEMLOGGD_03245 1.2e-26
GEMLOGGD_03246 3e-127 pgm3 G Phosphoglycerate mutase family
GEMLOGGD_03247 4.7e-125 pgm3 G Phosphoglycerate mutase family
GEMLOGGD_03248 0.0 yjbQ P TrkA C-terminal domain protein
GEMLOGGD_03249 3.1e-178 yqkA 3.6.1.55 F Belongs to the Nudix hydrolase family
GEMLOGGD_03250 1.9e-158 bglG3 K CAT RNA binding domain
GEMLOGGD_03251 0.0 2.7.1.193, 2.7.1.211 G phosphotransferase system
GEMLOGGD_03252 2.5e-299 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GEMLOGGD_03253 1.8e-108 dedA S SNARE associated Golgi protein
GEMLOGGD_03254 0.0 helD 3.6.4.12 L DNA helicase
GEMLOGGD_03255 1.7e-165 fabK 1.3.1.9 S Nitronate monooxygenase
GEMLOGGD_03256 1.2e-179 coaA 2.7.1.33 F Pantothenic acid kinase
GEMLOGGD_03257 9.6e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GEMLOGGD_03258 2.1e-100 K Transcriptional regulator, AbiEi antitoxin
GEMLOGGD_03259 6.2e-50
GEMLOGGD_03260 1.7e-63 K Helix-turn-helix XRE-family like proteins
GEMLOGGD_03261 0.0 L AAA domain
GEMLOGGD_03262 1.1e-116 XK27_07075 V CAAX protease self-immunity
GEMLOGGD_03263 1.4e-56 hxlR K HxlR-like helix-turn-helix
GEMLOGGD_03264 1.4e-234 EGP Major facilitator Superfamily
GEMLOGGD_03265 2.2e-162 S Cysteine-rich secretory protein family
GEMLOGGD_03266 2.9e-48 K Cro/C1-type HTH DNA-binding domain
GEMLOGGD_03267 1.9e-65 D nuclear chromosome segregation

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)