ORF_ID e_value Gene_name EC_number CAZy COGs Description
PFODIOPM_00001 3e-243 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PFODIOPM_00002 5.3e-201 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PFODIOPM_00003 2.2e-37 yaaA S S4 domain protein YaaA
PFODIOPM_00004 2.2e-210 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PFODIOPM_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PFODIOPM_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PFODIOPM_00007 5.1e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
PFODIOPM_00008 1.4e-88 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PFODIOPM_00009 3.3e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PFODIOPM_00010 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PFODIOPM_00011 4e-75 rplI J Binds to the 23S rRNA
PFODIOPM_00012 9.8e-250 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PFODIOPM_00013 3.1e-228 MA20_36090 S Protein of unknown function (DUF2974)
PFODIOPM_00014 0.0 V ATPases associated with a variety of cellular activities
PFODIOPM_00015 1.1e-68
PFODIOPM_00017 5.8e-121 yhiD S MgtC family
PFODIOPM_00019 6.3e-73 V ABC-type multidrug transport system, ATPase and permease components
PFODIOPM_00020 4.7e-83 V ABC-type multidrug transport system, ATPase and permease components
PFODIOPM_00021 6.2e-140 K LytTr DNA-binding domain
PFODIOPM_00022 1.2e-191 2.7.13.3 T GHKL domain
PFODIOPM_00024 5.4e-25
PFODIOPM_00025 1.1e-31 msbA2 3.6.3.44 V ABC transporter
PFODIOPM_00026 2.3e-246 msbA2 3.6.3.44 V ABC transporter
PFODIOPM_00027 0.0 KLT Protein kinase domain
PFODIOPM_00028 1e-20
PFODIOPM_00030 9.9e-112 ybbL S ABC transporter, ATP-binding protein
PFODIOPM_00031 2.3e-131 ybbM S Uncharacterised protein family (UPF0014)
PFODIOPM_00032 3.3e-10
PFODIOPM_00033 3.4e-240 lysA2 M Glycosyl hydrolases family 25
PFODIOPM_00034 9.4e-11 K Acetyltransferase (GNAT) domain
PFODIOPM_00035 3.4e-26 K Acetyltransferase (GNAT) domain
PFODIOPM_00036 1.8e-153 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PFODIOPM_00037 3.2e-90 S ECF-type riboflavin transporter, S component
PFODIOPM_00038 0.0 L Helicase C-terminal domain protein
PFODIOPM_00039 7.4e-100 T integral membrane protein
PFODIOPM_00040 2.3e-84 S YcxB-like protein
PFODIOPM_00041 1.4e-72 K Transcriptional regulator
PFODIOPM_00042 2.8e-32 qorB 1.6.5.2 GM epimerase
PFODIOPM_00043 3.3e-55 qorB 1.6.5.2 GM NmrA-like family
PFODIOPM_00044 1.3e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PFODIOPM_00046 1.8e-74
PFODIOPM_00048 6.4e-139 L Transposase
PFODIOPM_00050 6.9e-25 bgl 3.2.1.21, 3.2.1.86 GT1 G beta-glucosidase activity
PFODIOPM_00051 7.8e-193 manA 5.3.1.8 G mannose-6-phosphate isomerase
PFODIOPM_00052 3.7e-28 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PFODIOPM_00053 3.2e-18 yliE T EAL domain
PFODIOPM_00054 3.9e-139
PFODIOPM_00055 1.6e-07
PFODIOPM_00056 1.9e-83 K DNA-templated transcription, initiation
PFODIOPM_00057 4.2e-135 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PFODIOPM_00058 1.5e-167 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PFODIOPM_00059 8.1e-219 S Bacterial membrane protein, YfhO
PFODIOPM_00060 1.5e-87 S Bacterial membrane protein, YfhO
PFODIOPM_00061 1.3e-179 yfdH GT2 M Glycosyltransferase like family 2
PFODIOPM_00062 5.5e-92 racA K Domain of unknown function (DUF1836)
PFODIOPM_00063 3.8e-145 yitS S EDD domain protein, DegV family
PFODIOPM_00064 1.1e-103 T EAL domain
PFODIOPM_00065 1.5e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PFODIOPM_00066 4.7e-125 gpmB G Phosphoglycerate mutase family
PFODIOPM_00067 4e-12
PFODIOPM_00068 1.9e-119
PFODIOPM_00069 3.3e-43
PFODIOPM_00070 3.4e-84 S biotin transmembrane transporter activity
PFODIOPM_00071 2.4e-147 L the current gene model (or a revised gene model) may contain a frame shift
PFODIOPM_00072 3.4e-137 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PFODIOPM_00073 1.3e-18 L haloacid dehalogenase-like hydrolase
PFODIOPM_00074 8.7e-59 S glycolate biosynthetic process
PFODIOPM_00075 4.6e-162 xth 3.1.11.2 L exodeoxyribonuclease III
PFODIOPM_00076 2e-80
PFODIOPM_00077 4.2e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PFODIOPM_00078 6.7e-164 yvgN C Aldo keto reductase
PFODIOPM_00079 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
PFODIOPM_00080 3.2e-14 S Domain of unknown function (DUF4430)
PFODIOPM_00081 4.7e-94 S ECF transporter, substrate-specific component
PFODIOPM_00082 1.3e-99 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
PFODIOPM_00083 3.5e-199 L Transposase and inactivated derivatives, IS30 family
PFODIOPM_00084 6e-188 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PFODIOPM_00085 4.2e-203 1.1.3.15 C FAD linked oxidases, C-terminal domain
PFODIOPM_00086 8.4e-26 C FAD linked oxidase domain protein
PFODIOPM_00087 9.4e-74 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PFODIOPM_00088 1.2e-136 metQ_4 P Belongs to the nlpA lipoprotein family
PFODIOPM_00089 4.2e-91 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PFODIOPM_00090 4.6e-151 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PFODIOPM_00091 7.1e-200 L COG2826 Transposase and inactivated derivatives, IS30 family
PFODIOPM_00092 2.2e-13 mmgC 1.3.8.1 I Acyl-CoA dehydrogenase, C-terminal domain
PFODIOPM_00093 9.4e-258 V ABC-type multidrug transport system, ATPase and permease components
PFODIOPM_00094 6.3e-128
PFODIOPM_00095 1.3e-165 cpsY K Transcriptional regulator, LysR family
PFODIOPM_00096 2.4e-217 2.1.1.14 E methionine synthase, vitamin-B12 independent
PFODIOPM_00098 7.3e-172 glk 2.7.1.2 G Glucokinase
PFODIOPM_00099 2.4e-167 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PFODIOPM_00100 1.3e-221 naiP EGP Major facilitator Superfamily
PFODIOPM_00101 2.9e-96 S Membrane
PFODIOPM_00102 1.7e-148 ydiN EGP Major Facilitator Superfamily
PFODIOPM_00103 1.6e-171 K Transcriptional regulator, LysR family
PFODIOPM_00104 0.0 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 C FAD binding domain
PFODIOPM_00105 2.5e-166 arbZ I Phosphate acyltransferases
PFODIOPM_00106 1.6e-116 arbY M Glycosyl transferase family 8
PFODIOPM_00107 2.1e-154 arbx M Glycosyl transferase family 8
PFODIOPM_00108 2.2e-150 arbV 2.3.1.51 I Acyl-transferase
PFODIOPM_00110 2.6e-132 K response regulator
PFODIOPM_00111 0.0 vicK 2.7.13.3 T Histidine kinase
PFODIOPM_00112 5e-242 yycH S YycH protein
PFODIOPM_00113 4.4e-141 yycI S YycH protein
PFODIOPM_00114 8.8e-150 vicX 3.1.26.11 S domain protein
PFODIOPM_00115 7.2e-162 htrA 3.4.21.107 O serine protease
PFODIOPM_00116 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PFODIOPM_00120 2.7e-61 pdxH S Pyridoxamine 5'-phosphate oxidase
PFODIOPM_00121 9.3e-35 L Transposase and inactivated derivatives, IS30 family
PFODIOPM_00122 5.2e-39 L COG2826 Transposase and inactivated derivatives, IS30 family
PFODIOPM_00123 1.6e-112 P Cobalt transport protein
PFODIOPM_00124 1.4e-251 cbiO1 S ABC transporter, ATP-binding protein
PFODIOPM_00125 3.2e-270 emrY EGP Major facilitator Superfamily
PFODIOPM_00126 2.2e-151 K helix_turn_helix, arabinose operon control protein
PFODIOPM_00127 9.5e-172 natA1 S ABC transporter
PFODIOPM_00128 1.6e-108 S ABC-2 family transporter protein
PFODIOPM_00129 7.4e-138 S ABC-2 family transporter protein
PFODIOPM_00131 1.3e-221 S ATP diphosphatase activity
PFODIOPM_00132 1.2e-152 mutR K Helix-turn-helix XRE-family like proteins
PFODIOPM_00133 4.4e-150 htpX O Belongs to the peptidase M48B family
PFODIOPM_00134 1.6e-94 lemA S LemA family
PFODIOPM_00135 8.8e-204 ybiR P Citrate transporter
PFODIOPM_00136 2.8e-16
PFODIOPM_00137 3.8e-173 L HNH nucleases
PFODIOPM_00138 5e-114 CBM50 M NlpC P60 family protein
PFODIOPM_00139 1e-139 glnQ E ABC transporter, ATP-binding protein
PFODIOPM_00140 1.9e-273 glnP P ABC transporter permease
PFODIOPM_00141 4.6e-122 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PFODIOPM_00142 3.7e-66 yeaO S Protein of unknown function, DUF488
PFODIOPM_00143 7.2e-132 cobB K SIR2 family
PFODIOPM_00144 6.1e-82
PFODIOPM_00145 5.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PFODIOPM_00146 5.1e-181 S Alpha/beta hydrolase of unknown function (DUF915)
PFODIOPM_00147 1.5e-127 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PFODIOPM_00148 3.1e-162 ypuA S Protein of unknown function (DUF1002)
PFODIOPM_00149 2.5e-160 epsV 2.7.8.12 S glycosyl transferase family 2
PFODIOPM_00150 2.8e-125 S Alpha/beta hydrolase family
PFODIOPM_00151 1.5e-186 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PFODIOPM_00152 2.3e-267 L Transposase
PFODIOPM_00153 1.4e-124 luxT K Bacterial regulatory proteins, tetR family
PFODIOPM_00154 3.7e-143
PFODIOPM_00155 2.1e-117 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PFODIOPM_00156 1.5e-199 S Cysteine-rich secretory protein family
PFODIOPM_00157 7.6e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PFODIOPM_00158 1.8e-44
PFODIOPM_00159 2.3e-267 L Transposase
PFODIOPM_00160 9.9e-184 yibE S overlaps another CDS with the same product name
PFODIOPM_00161 4.5e-130 yibF S overlaps another CDS with the same product name
PFODIOPM_00162 1.3e-170 I alpha/beta hydrolase fold
PFODIOPM_00163 5.1e-98 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PFODIOPM_00164 2.2e-102 malF P Binding-protein-dependent transport system inner membrane component
PFODIOPM_00165 2.2e-82 malG P ABC transporter permease
PFODIOPM_00166 0.0 G Belongs to the glycosyl hydrolase 31 family
PFODIOPM_00167 9.5e-222 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PFODIOPM_00168 3e-89 ntd 2.4.2.6 F Nucleoside
PFODIOPM_00169 4.3e-83 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PFODIOPM_00170 1.7e-148 ptp3 3.1.3.48 T Tyrosine phosphatase family
PFODIOPM_00171 2.5e-83 uspA T universal stress protein
PFODIOPM_00172 6.7e-157 phnD P Phosphonate ABC transporter
PFODIOPM_00173 3.3e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PFODIOPM_00174 2.6e-125 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PFODIOPM_00175 4.9e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PFODIOPM_00176 1.3e-288 oppA E ABC transporter, substratebinding protein
PFODIOPM_00177 6.6e-84
PFODIOPM_00178 1.5e-274 S Calcineurin-like phosphoesterase
PFODIOPM_00179 0.0 asnB 6.3.5.4 E Asparagine synthase
PFODIOPM_00180 7.6e-249 yxbA 6.3.1.12 S ATP-grasp enzyme
PFODIOPM_00181 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PFODIOPM_00182 8e-142 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PFODIOPM_00183 9.4e-33 S Iron-sulfur cluster assembly protein
PFODIOPM_00184 3.7e-49 XK27_04775 S PAS domain
PFODIOPM_00185 1.4e-228 yttB EGP Major facilitator Superfamily
PFODIOPM_00186 5e-62 Z012_07300 O Glutaredoxin-related protein
PFODIOPM_00187 0.0 pepO 3.4.24.71 O Peptidase family M13
PFODIOPM_00188 0.0 kup P Transport of potassium into the cell
PFODIOPM_00189 1.5e-71
PFODIOPM_00190 2.4e-85
PFODIOPM_00191 1.3e-28
PFODIOPM_00192 1.2e-33 S Protein of unknown function (DUF2922)
PFODIOPM_00193 7.4e-193 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PFODIOPM_00194 1.2e-278 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PFODIOPM_00195 0.0 yjbQ P TrkA C-terminal domain protein
PFODIOPM_00196 8.7e-61 S Oxidoreductase
PFODIOPM_00197 1.5e-35 S inositol 2-dehydrogenase activity
PFODIOPM_00198 5.9e-132
PFODIOPM_00199 3.9e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PFODIOPM_00200 1.6e-206 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PFODIOPM_00201 3.5e-106 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PFODIOPM_00202 8.8e-251 XK27_08315 M Sulfatase
PFODIOPM_00203 6.3e-88 XK27_08315 M Sulfatase
PFODIOPM_00204 2.9e-215 XK27_08315 M Sulfatase
PFODIOPM_00205 1.5e-52 S Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units
PFODIOPM_00206 5.5e-95 L DDE superfamily endonuclease
PFODIOPM_00207 1.4e-98 3.6.1.55, 3.6.1.67 F NUDIX domain
PFODIOPM_00208 6e-112 papP P ABC transporter, permease protein
PFODIOPM_00209 4e-79 P ABC transporter permease
PFODIOPM_00210 1.5e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PFODIOPM_00211 2.7e-160 cjaA ET ABC transporter substrate-binding protein
PFODIOPM_00213 9.1e-242 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PFODIOPM_00215 2.3e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
PFODIOPM_00216 1.9e-64 E amino acid
PFODIOPM_00217 1.2e-232 amd 3.5.1.47 E Peptidase family M20/M25/M40
PFODIOPM_00218 1.6e-88 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PFODIOPM_00219 1.5e-127 mmuP E amino acid
PFODIOPM_00220 1.6e-243 N Uncharacterized conserved protein (DUF2075)
PFODIOPM_00221 7e-121 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PFODIOPM_00222 4e-08 oppA E ABC transporter, substratebinding protein
PFODIOPM_00223 2.7e-244 oppA E ABC transporter, substratebinding protein
PFODIOPM_00224 6.7e-290 oppA E ABC transporter, substratebinding protein
PFODIOPM_00225 1.9e-30 oppA E transmembrane transport
PFODIOPM_00226 3.2e-179 oppA E ABC transporter, substratebinding protein
PFODIOPM_00227 3e-301 oppA E ABC transporter
PFODIOPM_00228 2.6e-145 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PFODIOPM_00229 7.8e-183 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PFODIOPM_00230 3.9e-198 oppD P Belongs to the ABC transporter superfamily
PFODIOPM_00231 2.8e-179 oppF P Belongs to the ABC transporter superfamily
PFODIOPM_00232 5.1e-256 pepC 3.4.22.40 E aminopeptidase
PFODIOPM_00233 6.5e-259 pepC 3.4.22.40 E Papain family cysteine protease
PFODIOPM_00234 2.1e-73 hsp O Belongs to the small heat shock protein (HSP20) family
PFODIOPM_00235 2.1e-79 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PFODIOPM_00236 1.9e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PFODIOPM_00237 3.1e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PFODIOPM_00238 4.1e-253 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PFODIOPM_00239 2.6e-64
PFODIOPM_00240 2.1e-225 pbuX F xanthine permease
PFODIOPM_00241 1.3e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PFODIOPM_00242 1.2e-203 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PFODIOPM_00243 2.4e-300 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PFODIOPM_00244 0.0 V ABC-type multidrug transport system, ATPase and permease components
PFODIOPM_00245 1.8e-147 K Transcriptional regulator
PFODIOPM_00246 4.3e-245 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PFODIOPM_00249 3.8e-132 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PFODIOPM_00250 9.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PFODIOPM_00251 2.6e-127 tcyB E ABC transporter
PFODIOPM_00253 7.4e-130 2.4.2.3 F Phosphorylase superfamily
PFODIOPM_00254 8.2e-251 yxbA 6.3.1.12 S ATP-grasp enzyme
PFODIOPM_00255 2.6e-164 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PFODIOPM_00256 1.9e-35 mmuP E amino acid
PFODIOPM_00257 1e-108 mmuP E amino acid
PFODIOPM_00258 9.2e-175 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PFODIOPM_00259 8.6e-78 ywhH S Aminoacyl-tRNA editing domain
PFODIOPM_00260 2.8e-07 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Maltose acetyltransferase
PFODIOPM_00261 1.4e-75 K DNA-binding transcription factor activity
PFODIOPM_00262 4.6e-188 ansA 3.5.1.1 EJ L-asparaginase, type I
PFODIOPM_00263 1.7e-92 S Sucrose-6F-phosphate phosphohydrolase
PFODIOPM_00264 8.2e-74 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PFODIOPM_00265 1.2e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PFODIOPM_00266 2.1e-131 L Transposase and inactivated derivatives, IS30 family
PFODIOPM_00267 7.8e-54 L Transposase and inactivated derivatives, IS30 family
PFODIOPM_00268 1.3e-107 pncA Q Isochorismatase family
PFODIOPM_00269 2.6e-108
PFODIOPM_00270 7.7e-42 L Membrane
PFODIOPM_00271 7.5e-146 2.7.7.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
PFODIOPM_00272 3.2e-250 L Putative transposase DNA-binding domain
PFODIOPM_00273 4.1e-41 S Enterocin A Immunity
PFODIOPM_00275 2.9e-116 E peptidase
PFODIOPM_00276 5e-137 V ABC-2 type transporter
PFODIOPM_00277 2.6e-126 V ATPases associated with a variety of cellular activities
PFODIOPM_00278 2.3e-267 L Transposase
PFODIOPM_00279 1.4e-37 S Aromatic-ring-opening dioxygenase LigAB, LigA subunit
PFODIOPM_00280 1.7e-75 KLT Protein kinase domain
PFODIOPM_00281 1.7e-22 KLT Protein kinase domain
PFODIOPM_00282 1.1e-118
PFODIOPM_00284 1.3e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PFODIOPM_00285 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
PFODIOPM_00286 1.6e-103 S TPM domain
PFODIOPM_00287 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PFODIOPM_00288 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PFODIOPM_00289 3.3e-149 tatD L hydrolase, TatD family
PFODIOPM_00290 2.1e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PFODIOPM_00291 3e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PFODIOPM_00292 6.4e-38 veg S Biofilm formation stimulator VEG
PFODIOPM_00293 2.7e-149 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PFODIOPM_00294 1.8e-251 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PFODIOPM_00295 6.9e-48
PFODIOPM_00296 6.7e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PFODIOPM_00297 6.3e-254 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PFODIOPM_00298 2.5e-65 S Domain of unknown function (DUF1934)
PFODIOPM_00299 1.1e-64 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PFODIOPM_00300 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PFODIOPM_00301 2.3e-267 L Transposase
PFODIOPM_00302 1.3e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PFODIOPM_00303 1.6e-41 rpmE2 J Ribosomal protein L31
PFODIOPM_00304 2.7e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PFODIOPM_00305 8.2e-239 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PFODIOPM_00306 3.6e-70 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PFODIOPM_00307 1.2e-216 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PFODIOPM_00308 2e-126 S (CBS) domain
PFODIOPM_00309 1.1e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PFODIOPM_00310 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PFODIOPM_00311 3.2e-34 yabO J S4 domain protein
PFODIOPM_00312 1.5e-59 divIC D Septum formation initiator
PFODIOPM_00313 7.5e-61 yabR J S1 RNA binding domain
PFODIOPM_00314 2.7e-249 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PFODIOPM_00315 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PFODIOPM_00316 2e-163 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PFODIOPM_00317 8.4e-31 E ABC transporter, substratebinding protein
PFODIOPM_00318 2.3e-102 E ABC transporter, substratebinding protein
PFODIOPM_00319 2.6e-118 E ABC transporter, substratebinding protein
PFODIOPM_00320 3.4e-252 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PFODIOPM_00321 1.1e-197 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PFODIOPM_00322 2.5e-278 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PFODIOPM_00324 3.6e-38 T diguanylate cyclase activity
PFODIOPM_00325 2.9e-87 T diguanylate cyclase activity
PFODIOPM_00327 4.1e-22 metY 2.5.1.49 E o-acetylhomoserine
PFODIOPM_00328 2.5e-217 metY 2.5.1.49 E Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
PFODIOPM_00329 3.7e-108 XK27_00160 S Domain of unknown function (DUF5052)
PFODIOPM_00333 2.7e-82 yebR 1.8.4.14 T GAF domain-containing protein
PFODIOPM_00334 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PFODIOPM_00336 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PFODIOPM_00337 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PFODIOPM_00338 9e-08 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PFODIOPM_00341 1e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PFODIOPM_00342 3.5e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PFODIOPM_00343 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PFODIOPM_00344 1.2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PFODIOPM_00345 1.8e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PFODIOPM_00346 1.6e-106 rplD J Forms part of the polypeptide exit tunnel
PFODIOPM_00347 8.3e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PFODIOPM_00348 2.8e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PFODIOPM_00349 4.5e-45 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PFODIOPM_00350 8.9e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PFODIOPM_00351 9.4e-121 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PFODIOPM_00352 1.9e-77 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PFODIOPM_00353 3.7e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PFODIOPM_00354 3.8e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PFODIOPM_00355 1.6e-58 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PFODIOPM_00356 4.5e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PFODIOPM_00357 9.3e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PFODIOPM_00358 7.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PFODIOPM_00359 2.8e-91 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PFODIOPM_00360 5.7e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PFODIOPM_00361 1.3e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PFODIOPM_00362 1.3e-24 rpmD J Ribosomal protein L30
PFODIOPM_00363 1.8e-72 rplO J Binds to the 23S rRNA
PFODIOPM_00364 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PFODIOPM_00365 5.9e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PFODIOPM_00366 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PFODIOPM_00367 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PFODIOPM_00368 1.4e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PFODIOPM_00369 1.3e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PFODIOPM_00370 1.3e-61 rplQ J Ribosomal protein L17
PFODIOPM_00371 7.4e-155 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PFODIOPM_00372 4.4e-163 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PFODIOPM_00373 2.1e-143 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PFODIOPM_00374 6e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PFODIOPM_00375 4.2e-77 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PFODIOPM_00376 3.9e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
PFODIOPM_00377 3.5e-23
PFODIOPM_00378 1.6e-45
PFODIOPM_00379 1.4e-141 oppA E ABC transporter, substratebinding protein
PFODIOPM_00380 9.9e-68 oppA E ABC transporter, substratebinding protein
PFODIOPM_00381 1.2e-12 oppA E ABC transporter, substratebinding protein
PFODIOPM_00382 1.6e-119 XK27_07525 3.6.1.55 F NUDIX domain
PFODIOPM_00383 1.9e-52 EGP Major facilitator Superfamily
PFODIOPM_00384 9.3e-48 EGP Major facilitator Superfamily
PFODIOPM_00385 1.7e-90 S Phosphatidylethanolamine-binding protein
PFODIOPM_00388 8.5e-226 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PFODIOPM_00389 8.8e-166 pfoS S Phosphotransferase system, EIIC
PFODIOPM_00392 1.4e-56 oppA2 E ABC transporter, substratebinding protein
PFODIOPM_00393 2.9e-215
PFODIOPM_00394 1e-198
PFODIOPM_00395 3.9e-125 gntR1 K UTRA
PFODIOPM_00396 9.1e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PFODIOPM_00397 1.5e-261 epsU S Polysaccharide biosynthesis protein
PFODIOPM_00398 1.4e-133 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PFODIOPM_00399 1e-204 csaB M Glycosyl transferases group 1
PFODIOPM_00400 3.1e-135 M Glycosyltransferase sugar-binding region containing DXD motif
PFODIOPM_00401 3.3e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PFODIOPM_00402 0.0 pacL 3.6.3.8 P P-type ATPase
PFODIOPM_00405 3e-110 V ABC transporter
PFODIOPM_00406 1.8e-89 ydcK S Belongs to the SprT family
PFODIOPM_00408 4.1e-102 S ECF transporter, substrate-specific component
PFODIOPM_00409 1.3e-114 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PFODIOPM_00410 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PFODIOPM_00411 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PFODIOPM_00412 1.3e-191 camS S sex pheromone
PFODIOPM_00413 1.8e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PFODIOPM_00414 7.9e-266 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PFODIOPM_00415 3.2e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PFODIOPM_00416 1.5e-169 yegS 2.7.1.107 G Lipid kinase
PFODIOPM_00417 4e-117 S Protein of unknown function (DUF1211)
PFODIOPM_00418 4.8e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PFODIOPM_00419 1e-105 L Transposase
PFODIOPM_00420 0.0 2.1.1.72 V type I restriction-modification system
PFODIOPM_00421 1.7e-94 3.1.21.3 V Type I restriction modification DNA specificity domain
PFODIOPM_00422 7.4e-199 hsdR 3.1.21.3 L COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
PFODIOPM_00423 2.3e-267 L Transposase
PFODIOPM_00424 1.5e-263 hsdR 3.1.21.3 L COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
PFODIOPM_00425 5.8e-61
PFODIOPM_00426 2e-160 L Mrr N-terminal domain
PFODIOPM_00427 5.8e-120 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
PFODIOPM_00428 1.6e-56 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PFODIOPM_00429 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PFODIOPM_00430 4.3e-33 copZ P Heavy-metal-associated domain
PFODIOPM_00431 5.4e-46 D Di-iron-containing protein involved in the repair of iron-sulfur clusters
PFODIOPM_00432 1.3e-111 flp 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PFODIOPM_00433 1.8e-240 brnQ U Component of the transport system for branched-chain amino acids
PFODIOPM_00434 8.1e-125 alkD L DNA alkylation repair enzyme
PFODIOPM_00435 1.9e-94 nudC 1.3.7.1, 3.6.1.22 L NUDIX domain
PFODIOPM_00436 4.1e-65 yliE T Putative diguanylate phosphodiesterase
PFODIOPM_00438 1.2e-26 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PFODIOPM_00439 3.8e-52 ypaA S membrane
PFODIOPM_00440 1.1e-83 K AsnC family
PFODIOPM_00441 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PFODIOPM_00442 1.5e-50 mtlR K transcriptional antiterminator
PFODIOPM_00444 4.7e-68 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PFODIOPM_00445 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PFODIOPM_00446 5e-168 mleP3 S Membrane transport protein
PFODIOPM_00447 2.2e-309 ybiT S ABC transporter, ATP-binding protein
PFODIOPM_00448 5.3e-100 kgtP EGP Sugar (and other) transporter
PFODIOPM_00449 6.1e-49 kgtP EGP Sugar (and other) transporter
PFODIOPM_00451 2.6e-56
PFODIOPM_00452 2.3e-267 L Transposase
PFODIOPM_00453 3.3e-217 mdtG EGP Major facilitator Superfamily
PFODIOPM_00454 5e-120 ybhL S Belongs to the BI1 family
PFODIOPM_00455 1.3e-142 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PFODIOPM_00456 2.2e-281 pipD E Dipeptidase
PFODIOPM_00457 7.8e-210 pepA E M42 glutamyl aminopeptidase
PFODIOPM_00458 7e-101 S ABC-type cobalt transport system, permease component
PFODIOPM_00460 3.7e-111 udk 2.7.1.48 F Zeta toxin
PFODIOPM_00461 3.3e-118 udk 2.7.1.48 F Zeta toxin
PFODIOPM_00462 1.8e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PFODIOPM_00463 5.4e-150 glnH ET ABC transporter substrate-binding protein
PFODIOPM_00464 5.5e-110 gluC P ABC transporter permease
PFODIOPM_00465 4.4e-110 glnP P ABC transporter permease
PFODIOPM_00466 1.4e-153 glnH ET Bacterial periplasmic substrate-binding proteins
PFODIOPM_00467 9.7e-283 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PFODIOPM_00468 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PFODIOPM_00469 1.1e-200 S Uncharacterized protein conserved in bacteria (DUF2252)
PFODIOPM_00470 2.1e-76 S Uncharacterized protein conserved in bacteria (DUF2252)
PFODIOPM_00471 2.8e-10 S Protein of unknown function (DUF2974)
PFODIOPM_00472 4.8e-38
PFODIOPM_00473 5.9e-88
PFODIOPM_00474 1.2e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PFODIOPM_00475 1e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PFODIOPM_00476 5.5e-124 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PFODIOPM_00477 7.8e-174 rihB 3.2.2.1 F Nucleoside
PFODIOPM_00478 1.4e-72 gntR K UbiC transcription regulator-associated domain protein
PFODIOPM_00479 5.6e-12 gntR K UbiC transcription regulator-associated domain protein
PFODIOPM_00480 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PFODIOPM_00483 2.4e-17 3.4.22.70 M Sortase family
PFODIOPM_00484 2.1e-249 yhdP S Transporter associated domain
PFODIOPM_00485 9.8e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PFODIOPM_00486 8.4e-227 potE E amino acid
PFODIOPM_00487 6.4e-125 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
PFODIOPM_00488 1.3e-208 yfmL 3.6.4.13 L DEAD DEAH box helicase
PFODIOPM_00489 9.8e-247 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PFODIOPM_00491 3.6e-148 pfoS S Phosphotransferase system, EIIC
PFODIOPM_00492 2.3e-232 pyrP F Permease
PFODIOPM_00493 1.1e-228 ynbB 4.4.1.1 P aluminum resistance
PFODIOPM_00494 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PFODIOPM_00496 4.1e-270 E Amino acid permease
PFODIOPM_00497 1.4e-24
PFODIOPM_00498 8e-213 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PFODIOPM_00499 3.3e-51 gtcA S Teichoic acid glycosylation protein
PFODIOPM_00500 2.9e-78 fld C Flavodoxin
PFODIOPM_00501 3.6e-162 map 3.4.11.18 E Methionine Aminopeptidase
PFODIOPM_00502 4.5e-166 yihY S Belongs to the UPF0761 family
PFODIOPM_00503 1.8e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PFODIOPM_00504 2.8e-18
PFODIOPM_00505 8.9e-181 D Alpha beta
PFODIOPM_00506 3.5e-247 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PFODIOPM_00507 3.9e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
PFODIOPM_00508 4.5e-85
PFODIOPM_00509 1.7e-73
PFODIOPM_00510 1.2e-157 hlyX S Transporter associated domain
PFODIOPM_00511 1.6e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PFODIOPM_00512 6.5e-27
PFODIOPM_00513 6.4e-205 mco Q Multicopper oxidase
PFODIOPM_00514 2.1e-72 mco Q Multicopper oxidase
PFODIOPM_00515 2.3e-267 L Transposase
PFODIOPM_00516 1.1e-43 XK27_09445 S Domain of unknown function (DUF1827)
PFODIOPM_00517 0.0 clpE O Belongs to the ClpA ClpB family
PFODIOPM_00518 5.8e-10
PFODIOPM_00519 1.2e-39 ptsH G phosphocarrier protein HPR
PFODIOPM_00520 2.1e-302 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PFODIOPM_00521 5e-69 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PFODIOPM_00522 5.2e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PFODIOPM_00523 2.8e-162 coiA 3.6.4.12 S Competence protein
PFODIOPM_00524 3.4e-112 yjbH Q Thioredoxin
PFODIOPM_00525 3.3e-109 yjbK S CYTH
PFODIOPM_00526 3.1e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
PFODIOPM_00527 3.9e-150 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PFODIOPM_00528 8.2e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PFODIOPM_00529 2.8e-22
PFODIOPM_00530 1.1e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PFODIOPM_00531 1.1e-197 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PFODIOPM_00532 3.5e-64 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PFODIOPM_00533 2.1e-181 yubA S AI-2E family transporter
PFODIOPM_00534 8.7e-104 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PFODIOPM_00535 1.9e-68 WQ51_03320 S Protein of unknown function (DUF1149)
PFODIOPM_00536 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PFODIOPM_00537 3.5e-230 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PFODIOPM_00538 3.9e-237 S Peptidase M16
PFODIOPM_00539 1.2e-132 IQ Enoyl-(Acyl carrier protein) reductase
PFODIOPM_00540 3.6e-107 ymfM S Helix-turn-helix domain
PFODIOPM_00541 2.7e-97 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PFODIOPM_00542 4.6e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PFODIOPM_00543 5.1e-221 rny S Endoribonuclease that initiates mRNA decay
PFODIOPM_00544 3.1e-215 tagO 2.7.8.33, 2.7.8.35 M transferase
PFODIOPM_00545 4.7e-117 yvyE 3.4.13.9 S YigZ family
PFODIOPM_00546 2.7e-246 comFA L Helicase C-terminal domain protein
PFODIOPM_00547 7.4e-121 comFC S Competence protein
PFODIOPM_00548 1.6e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PFODIOPM_00549 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PFODIOPM_00550 5.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PFODIOPM_00551 9.1e-31
PFODIOPM_00552 1.2e-174 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PFODIOPM_00553 2.9e-156 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PFODIOPM_00554 6.5e-190 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PFODIOPM_00555 4.9e-176 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PFODIOPM_00556 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PFODIOPM_00557 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PFODIOPM_00558 7.4e-92 S Short repeat of unknown function (DUF308)
PFODIOPM_00559 4.4e-146 E D-aminopeptidase
PFODIOPM_00561 3e-81 dmpA 3.4.11.19 EQ Peptidase family S58
PFODIOPM_00562 2.4e-164 rapZ S Displays ATPase and GTPase activities
PFODIOPM_00563 5e-190 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PFODIOPM_00564 3.4e-169 whiA K May be required for sporulation
PFODIOPM_00565 5.5e-101 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PFODIOPM_00566 1.1e-37
PFODIOPM_00567 6.1e-213
PFODIOPM_00569 2.5e-20 ABC-SBP S ABC transporter
PFODIOPM_00570 1.6e-10 ABC-SBP S ABC transporter
PFODIOPM_00571 3.9e-30 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PFODIOPM_00572 6e-98 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PFODIOPM_00573 5.5e-133 XK27_08845 S ABC transporter, ATP-binding protein
PFODIOPM_00575 1.8e-212 cggR K Putative sugar-binding domain
PFODIOPM_00576 3.8e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PFODIOPM_00577 3e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PFODIOPM_00578 2.9e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PFODIOPM_00579 3.3e-49 3.2.2.20 K acetyltransferase
PFODIOPM_00580 4.7e-105
PFODIOPM_00581 2e-158 ycsE S Sucrose-6F-phosphate phosphohydrolase
PFODIOPM_00582 6.8e-135 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PFODIOPM_00583 9.7e-183 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PFODIOPM_00584 4.6e-85 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PFODIOPM_00585 1.2e-97 dnaQ 2.7.7.7 L DNA polymerase III
PFODIOPM_00586 2.9e-162 murB 1.3.1.98 M Cell wall formation
PFODIOPM_00587 1.4e-203 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PFODIOPM_00588 1.1e-144 potB P ABC transporter permease
PFODIOPM_00589 3.9e-129 potC P ABC transporter permease
PFODIOPM_00590 2.4e-206 potD P ABC transporter
PFODIOPM_00591 4.1e-150 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PFODIOPM_00592 1.5e-164 ybbR S YbbR-like protein
PFODIOPM_00593 5.3e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PFODIOPM_00594 6.8e-150 S hydrolase
PFODIOPM_00595 1.1e-56 V peptidase activity
PFODIOPM_00596 1.4e-77 atkY K Copper transport repressor CopY TcrY
PFODIOPM_00597 6.5e-55 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PFODIOPM_00598 0.0 copA 3.6.3.54 P P-type ATPase
PFODIOPM_00599 2.5e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PFODIOPM_00600 5e-60 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PFODIOPM_00601 3.8e-73
PFODIOPM_00602 6.7e-198 yliE T EAL domain
PFODIOPM_00603 1.3e-257 T Diguanylate cyclase, GGDEF domain
PFODIOPM_00604 1.5e-25
PFODIOPM_00605 3.1e-66
PFODIOPM_00606 6.3e-84 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PFODIOPM_00607 2.7e-67 GM epimerase
PFODIOPM_00608 0.0 E Amino acid permease
PFODIOPM_00609 6.5e-101 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PFODIOPM_00610 2e-157 rssA S Phospholipase, patatin family
PFODIOPM_00611 1.2e-163 psaA P Belongs to the bacterial solute-binding protein 9 family
PFODIOPM_00612 2e-94 S VanZ like family
PFODIOPM_00613 1.4e-130 yebC K Transcriptional regulatory protein
PFODIOPM_00614 4.4e-180 comGA NU Type II IV secretion system protein
PFODIOPM_00615 2.9e-158 comGB NU type II secretion system
PFODIOPM_00616 1.4e-50 comGC U competence protein ComGC
PFODIOPM_00617 2.3e-75
PFODIOPM_00619 1.9e-11 comGF U Putative Competence protein ComGF
PFODIOPM_00620 2.8e-185 ytxK 2.1.1.72 L N-6 DNA Methylase
PFODIOPM_00621 2.6e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PFODIOPM_00624 6.1e-134 K Transcriptional regulatory protein, C terminal
PFODIOPM_00625 7.7e-275 T PhoQ Sensor
PFODIOPM_00626 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PFODIOPM_00627 1.1e-107 vanZ V VanZ like family
PFODIOPM_00628 6.2e-257 pgi 5.3.1.9 G Belongs to the GPI family
PFODIOPM_00629 1.4e-23 oppA E ABC transporter, substratebinding protein
PFODIOPM_00630 3.6e-177 oppA E ABC transporter, substratebinding protein
PFODIOPM_00633 7.6e-191 ampC V Beta-lactamase
PFODIOPM_00634 4.3e-34
PFODIOPM_00635 7.9e-260 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
PFODIOPM_00636 1.4e-112 tdk 2.7.1.21 F thymidine kinase
PFODIOPM_00637 4.6e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PFODIOPM_00638 3e-156 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PFODIOPM_00639 9.1e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PFODIOPM_00640 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PFODIOPM_00641 4.2e-127 atpB C it plays a direct role in the translocation of protons across the membrane
PFODIOPM_00642 3.1e-28 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PFODIOPM_00643 4.2e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PFODIOPM_00644 3.9e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PFODIOPM_00645 2.9e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PFODIOPM_00646 2.4e-170 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PFODIOPM_00647 1.3e-247 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PFODIOPM_00648 1.6e-73 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PFODIOPM_00649 5.1e-32 ywzB S Protein of unknown function (DUF1146)
PFODIOPM_00650 6.1e-177 mbl D Cell shape determining protein MreB Mrl
PFODIOPM_00651 2.2e-47 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PFODIOPM_00652 3.3e-33 S Protein of unknown function (DUF2969)
PFODIOPM_00653 5.9e-219 rodA D Belongs to the SEDS family
PFODIOPM_00654 3e-78 usp6 T universal stress protein
PFODIOPM_00655 1.3e-42
PFODIOPM_00656 1.6e-241 rarA L recombination factor protein RarA
PFODIOPM_00657 2.3e-81 yueI S Protein of unknown function (DUF1694)
PFODIOPM_00658 1.2e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PFODIOPM_00659 9.9e-300 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PFODIOPM_00660 9.2e-217 iscS2 2.8.1.7 E Aminotransferase class V
PFODIOPM_00661 1.6e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PFODIOPM_00662 2.9e-128 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PFODIOPM_00663 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PFODIOPM_00664 4.5e-233 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PFODIOPM_00665 2.3e-127 S Haloacid dehalogenase-like hydrolase
PFODIOPM_00666 1.2e-114 radC L DNA repair protein
PFODIOPM_00667 2.6e-175 mreB D cell shape determining protein MreB
PFODIOPM_00668 6.3e-138 mreC M Involved in formation and maintenance of cell shape
PFODIOPM_00669 9.3e-95 mreD
PFODIOPM_00671 5.7e-55 S Protein of unknown function (DUF3397)
PFODIOPM_00672 4.1e-77 mraZ K Belongs to the MraZ family
PFODIOPM_00673 1.1e-172 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PFODIOPM_00674 4.8e-55 ftsL D Cell division protein FtsL
PFODIOPM_00675 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PFODIOPM_00676 7.7e-177 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PFODIOPM_00677 5.6e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PFODIOPM_00678 1.2e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PFODIOPM_00679 2.3e-148 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PFODIOPM_00680 2.2e-241 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PFODIOPM_00681 2.5e-205 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PFODIOPM_00682 1.1e-64 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PFODIOPM_00683 7.6e-46 yggT S YGGT family
PFODIOPM_00684 7.7e-146 ylmH S S4 domain protein
PFODIOPM_00685 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PFODIOPM_00686 1.5e-32 cspA K 'Cold-shock' DNA-binding domain
PFODIOPM_00687 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PFODIOPM_00688 5.4e-19
PFODIOPM_00689 3.1e-127 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PFODIOPM_00690 2.8e-213 iscS 2.8.1.7 E Aminotransferase class V
PFODIOPM_00691 3.2e-56 XK27_04120 S Putative amino acid metabolism
PFODIOPM_00692 2.1e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PFODIOPM_00693 2e-123 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PFODIOPM_00694 3e-103 S Repeat protein
PFODIOPM_00695 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PFODIOPM_00696 6.7e-251 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PFODIOPM_00697 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PFODIOPM_00698 2.7e-35 ykzG S Belongs to the UPF0356 family
PFODIOPM_00699 4.7e-102 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PFODIOPM_00700 0.0 typA T GTP-binding protein TypA
PFODIOPM_00701 8.4e-213 ftsW D Belongs to the SEDS family
PFODIOPM_00702 1.1e-53 ylbG S UPF0298 protein
PFODIOPM_00703 1.6e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PFODIOPM_00704 9.8e-83 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PFODIOPM_00705 3e-190 ylbL T Belongs to the peptidase S16 family
PFODIOPM_00706 6.4e-70 comEA L Competence protein ComEA
PFODIOPM_00707 0.0 comEC S Competence protein ComEC
PFODIOPM_00708 1.6e-180 holA 2.7.7.7 L DNA polymerase III delta subunit
PFODIOPM_00709 1.6e-33 rpsT J Binds directly to 16S ribosomal RNA
PFODIOPM_00710 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PFODIOPM_00711 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PFODIOPM_00712 1.3e-148
PFODIOPM_00713 2.8e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PFODIOPM_00714 3.5e-212 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PFODIOPM_00715 3.8e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PFODIOPM_00716 6.3e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
PFODIOPM_00717 4.4e-44 S Protein of unknown function (DUF2974)
PFODIOPM_00718 3.3e-191 I Protein of unknown function (DUF2974)
PFODIOPM_00720 2.8e-125 pnb C nitroreductase
PFODIOPM_00721 0.0 E ABC transporter, substratebinding protein
PFODIOPM_00722 5.4e-65
PFODIOPM_00723 2.9e-122 1.1.1.28 CH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PFODIOPM_00724 1.8e-189 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PFODIOPM_00725 2.6e-88 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PFODIOPM_00726 1.9e-38 aha1 P E1-E2 ATPase
PFODIOPM_00727 0.0 aha1 P E1-E2 ATPase
PFODIOPM_00728 3.2e-121 metQ2 P Belongs to the nlpA lipoprotein family
PFODIOPM_00729 5.3e-187 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PFODIOPM_00730 3.4e-113 metI P ABC transporter permease
PFODIOPM_00731 6.4e-265 frdC 1.3.5.4 C FAD binding domain
PFODIOPM_00732 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PFODIOPM_00733 1.8e-74
PFODIOPM_00736 1.5e-77 L COG3547 Transposase and inactivated derivatives
PFODIOPM_00737 1.2e-146 L COG3547 Transposase and inactivated derivatives
PFODIOPM_00738 4.1e-71 E Methionine synthase
PFODIOPM_00739 2.1e-235 EK Aminotransferase, class I
PFODIOPM_00740 1.4e-167 K LysR substrate binding domain
PFODIOPM_00741 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PFODIOPM_00742 1e-76 argR K Regulates arginine biosynthesis genes
PFODIOPM_00743 3.1e-223 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PFODIOPM_00744 2.5e-208 S Amidohydrolase
PFODIOPM_00745 5.5e-175 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PFODIOPM_00746 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PFODIOPM_00747 3.2e-183 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PFODIOPM_00748 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PFODIOPM_00749 8.1e-235 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PFODIOPM_00750 0.0 oatA I Acyltransferase
PFODIOPM_00751 3.7e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PFODIOPM_00752 4.5e-138 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PFODIOPM_00753 1e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PFODIOPM_00754 4e-308 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PFODIOPM_00755 0.0 L SNF2 family N-terminal domain
PFODIOPM_00756 2.4e-46
PFODIOPM_00758 3.2e-98 ywlG S Belongs to the UPF0340 family
PFODIOPM_00759 1.9e-15 gmuR K UTRA
PFODIOPM_00760 4.4e-55 gmuR K UbiC transcription regulator-associated domain protein
PFODIOPM_00761 1.3e-88 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PFODIOPM_00762 1.2e-227 L COG3547 Transposase and inactivated derivatives
PFODIOPM_00763 4.3e-29 S Protein of unknown function (DUF2929)
PFODIOPM_00764 0.0 dnaE 2.7.7.7 L DNA polymerase
PFODIOPM_00765 2e-180 pfkA 2.7.1.11, 2.7.1.90 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PFODIOPM_00766 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PFODIOPM_00767 5.9e-39 ssuB P anion transmembrane transporter activity
PFODIOPM_00769 1e-88 I Acyltransferase family
PFODIOPM_00770 4e-164 cvfB S S1 domain
PFODIOPM_00771 1.8e-164 xerD D recombinase XerD
PFODIOPM_00772 8.9e-62 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PFODIOPM_00773 1.7e-128 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PFODIOPM_00774 3.4e-106 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PFODIOPM_00775 9.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PFODIOPM_00776 3.9e-117 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PFODIOPM_00778 3e-108 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PFODIOPM_00779 3.2e-212 rpsA 1.17.7.4 J Ribosomal protein S1
PFODIOPM_00780 7.4e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PFODIOPM_00781 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PFODIOPM_00782 3.9e-229 S Tetratricopeptide repeat protein
PFODIOPM_00783 0.0 S Bacterial membrane protein YfhO
PFODIOPM_00784 1.1e-170 K LysR substrate binding domain
PFODIOPM_00785 7.4e-09 K Transcriptional regulator, LysR family
PFODIOPM_00786 3.7e-114 K DNA-binding transcription factor activity
PFODIOPM_00787 9.7e-23
PFODIOPM_00788 1.3e-15
PFODIOPM_00789 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PFODIOPM_00790 7e-71
PFODIOPM_00791 2.9e-217 argH 2.3.1.1, 4.3.2.1 E argininosuccinate lyase
PFODIOPM_00795 2.4e-11 1.3.5.4 C FAD binding domain
PFODIOPM_00796 1.4e-110 2.7.6.5 T Region found in RelA / SpoT proteins
PFODIOPM_00797 2.8e-117 K response regulator
PFODIOPM_00798 1.1e-228 sptS 2.7.13.3 T Histidine kinase
PFODIOPM_00799 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PFODIOPM_00800 8.2e-128 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PFODIOPM_00801 4.6e-38 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PFODIOPM_00802 3.2e-52 S CRISPR-associated protein (Cas_Csn2)
PFODIOPM_00803 8.5e-196 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PFODIOPM_00804 1.5e-217 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PFODIOPM_00805 4.8e-221 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PFODIOPM_00806 5e-222 yjjP S Putative threonine/serine exporter
PFODIOPM_00807 1.1e-89 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PFODIOPM_00808 2.1e-174 prmA J Ribosomal protein L11 methyltransferase
PFODIOPM_00809 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PFODIOPM_00810 1.1e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PFODIOPM_00811 2.3e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
PFODIOPM_00812 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PFODIOPM_00813 4.1e-12
PFODIOPM_00814 2.6e-202 L COG2826 Transposase and inactivated derivatives, IS30 family
PFODIOPM_00815 0.0 S Predicted membrane protein (DUF2207)
PFODIOPM_00816 4.3e-184 K AI-2E family transporter
PFODIOPM_00817 3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PFODIOPM_00818 3.9e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PFODIOPM_00819 7.4e-180 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PFODIOPM_00820 6.3e-123 IQ reductase
PFODIOPM_00821 3.9e-226 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PFODIOPM_00822 1e-68 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PFODIOPM_00823 1.9e-77 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PFODIOPM_00824 1.4e-259 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PFODIOPM_00825 1.7e-159 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PFODIOPM_00826 6.7e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PFODIOPM_00827 2.1e-126 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PFODIOPM_00828 2.6e-123 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PFODIOPM_00830 4e-49 S Domain of Unknown Function with PDB structure (DUF3862)
PFODIOPM_00833 2.8e-17 G Polysaccharide deacetylase
PFODIOPM_00834 3e-142 G polysaccharide deacetylase
PFODIOPM_00835 1.6e-51 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PFODIOPM_00836 1.1e-169 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
PFODIOPM_00838 1.8e-74
PFODIOPM_00840 1.3e-159 spoU 2.1.1.185 J Methyltransferase
PFODIOPM_00841 1.2e-79 asnB 6.3.5.4 E Aluminium induced protein
PFODIOPM_00842 3.3e-185 asnB 6.3.5.4 E Aluminium induced protein
PFODIOPM_00858 1.3e-106 oppA E ABC transporter, substratebinding protein
PFODIOPM_00859 9.5e-107 oppA E ABC transporter, substratebinding protein
PFODIOPM_00860 1.9e-13 oppA E ABC transporter, substratebinding protein
PFODIOPM_00861 7.2e-26
PFODIOPM_00862 2.5e-129 yliE T Putative diguanylate phosphodiesterase
PFODIOPM_00865 1.7e-154 pstS P Phosphate
PFODIOPM_00866 1.1e-161 pstC P probably responsible for the translocation of the substrate across the membrane
PFODIOPM_00867 2.8e-157 pstA P Phosphate transport system permease protein PstA
PFODIOPM_00868 3.2e-141 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PFODIOPM_00869 1.8e-113 phoU P Plays a role in the regulation of phosphate uptake
PFODIOPM_00870 1.4e-124 T Transcriptional regulatory protein, C terminal
PFODIOPM_00871 3.2e-303 phoR 2.7.13.3 T Histidine kinase
PFODIOPM_00872 2.4e-21 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PFODIOPM_00873 5.1e-33 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PFODIOPM_00874 8.4e-16 lsa S ABC transporter
PFODIOPM_00875 3.2e-65 lsa S ABC transporter
PFODIOPM_00877 7e-121 3.6.1.13 L NUDIX domain
PFODIOPM_00878 2.7e-191 S Glycosyl hydrolases family 18
PFODIOPM_00879 2.3e-267 L Transposase
PFODIOPM_00880 2.3e-267 L Transposase
PFODIOPM_00882 5e-71 yliE T Putative diguanylate phosphodiesterase
PFODIOPM_00883 4e-204 yliE T Putative diguanylate phosphodiesterase
PFODIOPM_00884 5.4e-192 2.7.7.65 T diguanylate cyclase
PFODIOPM_00885 9e-104
PFODIOPM_00886 5e-153 supH G Sucrose-6F-phosphate phosphohydrolase
PFODIOPM_00887 2.1e-14 K Winged helix DNA-binding domain
PFODIOPM_00888 7.1e-42 lmrA V (ABC) transporter
PFODIOPM_00889 5.5e-43 lmrA V ABC transporter, ATP-binding protein
PFODIOPM_00890 2.8e-52 V abc transporter atp-binding protein
PFODIOPM_00891 4.7e-185 yfiC V ABC transporter
PFODIOPM_00892 1.7e-30 yfiC V ABC transporter
PFODIOPM_00893 1.3e-103 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PFODIOPM_00894 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PFODIOPM_00895 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PFODIOPM_00896 1.4e-170 ppaC 3.6.1.1 C inorganic pyrophosphatase
PFODIOPM_00897 5.7e-194 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PFODIOPM_00898 4.2e-203 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PFODIOPM_00899 7.7e-177 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PFODIOPM_00900 3.7e-168 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PFODIOPM_00901 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PFODIOPM_00902 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PFODIOPM_00903 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PFODIOPM_00904 1.2e-59 ypmB S Protein conserved in bacteria
PFODIOPM_00905 2.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PFODIOPM_00906 9.7e-115 dnaD L DnaD domain protein
PFODIOPM_00907 5.5e-115 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PFODIOPM_00908 2.6e-149 S Sucrose-6F-phosphate phosphohydrolase
PFODIOPM_00909 3e-53 I Psort location Cytoplasmic, score
PFODIOPM_00910 8.6e-59 I acetylesterase activity
PFODIOPM_00911 7e-189 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PFODIOPM_00912 0.0 dap2 3.4.19.1 E Prolyl oligopeptidase family
PFODIOPM_00913 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PFODIOPM_00914 2e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PFODIOPM_00915 3.2e-106 ypsA S Belongs to the UPF0398 family
PFODIOPM_00916 1e-57 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PFODIOPM_00917 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PFODIOPM_00918 2.3e-107 XK27_01810 S Calcineurin-like phosphoesterase
PFODIOPM_00919 4.4e-67 XK27_01810 S Calcineurin-like phosphoesterase
PFODIOPM_00920 5.4e-59
PFODIOPM_00921 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PFODIOPM_00922 9.3e-72 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PFODIOPM_00923 1e-170 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PFODIOPM_00924 5.7e-197 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PFODIOPM_00925 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PFODIOPM_00926 5.6e-43 gcvR T Belongs to the UPF0237 family
PFODIOPM_00927 2.9e-246 XK27_08635 S UPF0210 protein
PFODIOPM_00928 3.7e-307 FbpA K Fibronectin-binding protein
PFODIOPM_00929 6.3e-157 degV S EDD domain protein, DegV family
PFODIOPM_00930 1.1e-182
PFODIOPM_00931 1.3e-165 EG EamA-like transporter family
PFODIOPM_00932 2.1e-120 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PFODIOPM_00933 3.3e-86 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PFODIOPM_00934 1.1e-83 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PFODIOPM_00935 1e-85 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PFODIOPM_00936 2.3e-267 L Transposase
PFODIOPM_00937 1.4e-115 3.1.3.73 G phosphoglycerate mutase
PFODIOPM_00938 4.7e-13 XK27_06780 V ABC transporter permease
PFODIOPM_00939 6e-91 C Nitroreductase family
PFODIOPM_00940 2e-45 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PFODIOPM_00941 1.5e-25 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PFODIOPM_00942 2.6e-204 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PFODIOPM_00943 1.7e-201 xerS L Belongs to the 'phage' integrase family
PFODIOPM_00944 2e-211 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PFODIOPM_00945 3.9e-194 S Uncharacterized protein conserved in bacteria (DUF2325)
PFODIOPM_00946 1.5e-71 S Sel1-like repeats.
PFODIOPM_00947 3.8e-42 T Diguanylate cyclase, GGDEF domain
PFODIOPM_00948 7.1e-98 GM NmrA-like family
PFODIOPM_00949 3.1e-178 hsdR 3.1.21.3 V Type I restriction enzyme R protein N terminus (HSDR_N)
PFODIOPM_00950 7.4e-83 S An automated process has identified a potential problem with this gene model
PFODIOPM_00951 3.8e-140 S Protein of unknown function (DUF3100)
PFODIOPM_00952 2.5e-247 3.5.1.47 S Peptidase dimerisation domain
PFODIOPM_00953 6.3e-08 XK27_05370 5.3.1.24 E phosphoribosylanthranilate isomerase activity
PFODIOPM_00954 3.9e-262 S Uncharacterised protein family (UPF0236)
PFODIOPM_00955 1.4e-65 S ASCH domain
PFODIOPM_00956 2.4e-109 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PFODIOPM_00957 3.6e-79
PFODIOPM_00958 1e-41 L the current gene model (or a revised gene model) may contain a frame shift
PFODIOPM_00959 3.4e-65 L the current gene model (or a revised gene model) may contain a frame shift
PFODIOPM_00960 1e-57 L the current gene model (or a revised gene model) may contain a frame shift
PFODIOPM_00961 1.1e-118 WQ51_05710 S Mitochondrial biogenesis AIM24
PFODIOPM_00962 3.4e-77 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PFODIOPM_00963 1e-155 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PFODIOPM_00965 4.1e-92 ybaJ Q Hypothetical methyltransferase
PFODIOPM_00966 1.4e-30 V (ABC) transporter
PFODIOPM_00967 1.1e-195 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PFODIOPM_00968 4.3e-29 carB 6.3.5.5 F Psort location Cytoplasmic, score 8.87
PFODIOPM_00969 9.8e-97 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PFODIOPM_00970 3.3e-159 carB 6.3.5.5 F Psort location Cytoplasmic, score 8.87
PFODIOPM_00971 2e-210 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PFODIOPM_00972 8.6e-37 T diguanylate cyclase activity
PFODIOPM_00974 3.9e-208 V MATE efflux family protein
PFODIOPM_00975 1.9e-65 prpH 3.1.3.16 K 3.5.2 Transcription regulation
PFODIOPM_00976 1e-28 prpH 3.1.3.16 K 3.5.2 Transcription regulation
PFODIOPM_00977 1.1e-73 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PFODIOPM_00978 1.2e-105 L Integrase
PFODIOPM_00979 7.6e-58 XK27_03610 K Acetyltransferase (GNAT) domain
PFODIOPM_00980 1.6e-67 cylB V ABC-2 type transporter
PFODIOPM_00981 1.5e-77 S Psort location CytoplasmicMembrane, score
PFODIOPM_00982 1.1e-86
PFODIOPM_00983 1.8e-19 arsC 1.20.4.1 T Low molecular weight phosphotyrosine protein phosphatase
PFODIOPM_00984 3.3e-130 cysA V ABC transporter, ATP-binding protein
PFODIOPM_00985 0.0 V FtsX-like permease family
PFODIOPM_00986 5.4e-13 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PFODIOPM_00987 4.8e-27 K Bacterial regulatory helix-turn-helix protein, lysR family
PFODIOPM_00988 7.3e-83 1.3.5.4 C FAD binding domain
PFODIOPM_00989 5.4e-20 1.3.5.4 C FAD binding domain
PFODIOPM_00990 5.8e-160 1.3.5.4 C FAD binding domain
PFODIOPM_00991 2.6e-09 S Motility quorum-sensing regulator, toxin of MqsA
PFODIOPM_00993 3.2e-106 ydaF J Acetyltransferase (GNAT) domain
PFODIOPM_00994 2.3e-77 S SLAP domain
PFODIOPM_00995 5e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PFODIOPM_00996 2.6e-219 patA 2.6.1.1 E Aminotransferase
PFODIOPM_00997 9.5e-141 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PFODIOPM_00998 4.7e-171 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PFODIOPM_00999 2e-219 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PFODIOPM_01000 1.7e-72 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PFODIOPM_01001 2.8e-252 lysC 2.7.2.4 E Belongs to the aspartokinase family
PFODIOPM_01002 2.7e-185 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PFODIOPM_01003 3.8e-44 S SLAP domain
PFODIOPM_01004 3.2e-106 ydaF J Acetyltransferase (GNAT) domain
PFODIOPM_01006 2.6e-09 S Motility quorum-sensing regulator, toxin of MqsA
PFODIOPM_01007 5.8e-160 1.3.5.4 C FAD binding domain
PFODIOPM_01008 5.4e-20 1.3.5.4 C FAD binding domain
PFODIOPM_01009 7.3e-83 1.3.5.4 C FAD binding domain
PFODIOPM_01010 4.8e-27 K Bacterial regulatory helix-turn-helix protein, lysR family
PFODIOPM_01011 5.4e-13 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PFODIOPM_01012 0.0 V FtsX-like permease family
PFODIOPM_01013 3.3e-130 cysA V ABC transporter, ATP-binding protein
PFODIOPM_01015 1.8e-19 arsC 1.20.4.1 T Low molecular weight phosphotyrosine protein phosphatase
PFODIOPM_01016 3.9e-19
PFODIOPM_01017 3.1e-27
PFODIOPM_01018 1.5e-77 S Psort location CytoplasmicMembrane, score
PFODIOPM_01019 1.6e-67 cylB V ABC-2 type transporter
PFODIOPM_01020 5.6e-23 cylB U ABC-2 type transporter
PFODIOPM_01022 3.9e-100 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PFODIOPM_01023 4.3e-29 carB 6.3.5.5 F Psort location Cytoplasmic, score 8.87
PFODIOPM_01024 1.1e-195 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PFODIOPM_01025 1.4e-30 V (ABC) transporter
PFODIOPM_01026 4.1e-92 ybaJ Q Hypothetical methyltransferase
PFODIOPM_01028 1e-155 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PFODIOPM_01029 3.4e-77 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PFODIOPM_01030 1.1e-118 WQ51_05710 S Mitochondrial biogenesis AIM24
PFODIOPM_01031 1e-57 L the current gene model (or a revised gene model) may contain a frame shift
PFODIOPM_01032 3.4e-65 L the current gene model (or a revised gene model) may contain a frame shift
PFODIOPM_01033 1e-41 L the current gene model (or a revised gene model) may contain a frame shift
PFODIOPM_01034 3.6e-79
PFODIOPM_01035 2.4e-109 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PFODIOPM_01036 1.4e-65 S ASCH domain
PFODIOPM_01037 3.9e-262 S Uncharacterised protein family (UPF0236)
PFODIOPM_01038 6.3e-08 XK27_05370 5.3.1.24 E phosphoribosylanthranilate isomerase activity
PFODIOPM_01039 2.5e-247 3.5.1.47 S Peptidase dimerisation domain
PFODIOPM_01040 3.8e-140 S Protein of unknown function (DUF3100)
PFODIOPM_01041 7.4e-83 S An automated process has identified a potential problem with this gene model
PFODIOPM_01042 9.7e-132 hsdR 3.1.21.3 V Type I restriction enzyme R protein N terminus (HSDR_N)
PFODIOPM_01043 1.6e-17 cas6 S Pfam:DUF2276
PFODIOPM_01044 0.0
PFODIOPM_01045 0.0
PFODIOPM_01046 9.1e-164 1.1.1.399, 1.1.1.95 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PFODIOPM_01047 3.4e-77 K Transcriptional regulator, MarR family
PFODIOPM_01048 4.5e-308 XK27_09600 V ABC transporter, ATP-binding protein
PFODIOPM_01049 0.0 V ABC transporter transmembrane region
PFODIOPM_01050 9.5e-52 P Rhodanese Homology Domain
PFODIOPM_01051 1.1e-68 rnhA 3.1.26.4 L RNA-DNA hybrid ribonuclease activity
PFODIOPM_01052 1.4e-170 rnhA 3.1.26.4 L Resolvase, N-terminal
PFODIOPM_01053 8.4e-63 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PFODIOPM_01054 2e-42 yjdJ S GCN5-related N-acetyl-transferase
PFODIOPM_01055 6.7e-133 gph 3.1.3.18 S HAD-hyrolase-like
PFODIOPM_01057 3.3e-65 K LytTr DNA-binding domain protein
PFODIOPM_01058 9.5e-228 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01059 5.2e-147 ligA 2.7.7.7, 6.5.1.2 L EXOIII
PFODIOPM_01060 3.1e-99 yyaQ S YjbR
PFODIOPM_01061 7e-144 ydcF S Gram-negative-bacterium-type cell wall biogenesis
PFODIOPM_01062 7e-109 pat 2.3.1.183 M Acetyltransferase (GNAT) domain
PFODIOPM_01063 1.7e-76 1.3.5.4 C FMN_bind
PFODIOPM_01064 4.3e-09 D Filamentation induced by cAMP protein fic
PFODIOPM_01065 5.2e-23 D Filamentation induced by cAMP protein fic
PFODIOPM_01066 7.1e-158 3.4.17.13 V LD-carboxypeptidase
PFODIOPM_01067 3.3e-264 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PFODIOPM_01068 4e-173
PFODIOPM_01069 4.2e-138
PFODIOPM_01070 1.3e-25
PFODIOPM_01071 6.6e-113 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PFODIOPM_01072 1.1e-138 prsW S Involved in the degradation of specific anti-sigma factors
PFODIOPM_01073 3.7e-113 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PFODIOPM_01074 4.1e-37 metA 2.3.1.46 E L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
PFODIOPM_01075 1.9e-267 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
PFODIOPM_01076 1.1e-278 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PFODIOPM_01077 2.3e-170 E ABC transporter, ATP-binding protein
PFODIOPM_01078 3e-78 K Transcriptional regulator
PFODIOPM_01079 4.3e-48 1.6.5.2 GM NmrA-like family
PFODIOPM_01080 1.2e-166 htpX O Peptidase family M48
PFODIOPM_01081 2.4e-44
PFODIOPM_01082 4.8e-229 4.4.1.8 E Aminotransferase, class I
PFODIOPM_01083 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
PFODIOPM_01084 4.4e-19 K GNAT family
PFODIOPM_01085 2.2e-82
PFODIOPM_01086 6e-106 dedA 3.1.3.1 S SNARE associated Golgi protein
PFODIOPM_01087 2.9e-198 asnA 6.3.1.1 F aspartate--ammonia ligase
PFODIOPM_01088 1.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PFODIOPM_01089 8.9e-231 isp2 L Transposase
PFODIOPM_01090 2.3e-267 L Transposase
PFODIOPM_01091 3.6e-227 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01092 6.3e-108 galR K Transcriptional regulator
PFODIOPM_01093 6.6e-26 K purine nucleotide biosynthetic process
PFODIOPM_01094 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PFODIOPM_01095 0.0 lacS G Transporter
PFODIOPM_01096 3.4e-26 L DDE superfamily endonuclease
PFODIOPM_01097 1.3e-140 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01098 1.9e-99 L DDE superfamily endonuclease
PFODIOPM_01099 5.4e-47 L DDE superfamily endonuclease
PFODIOPM_01100 9.3e-72 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PFODIOPM_01101 3.9e-53 S Alpha beta hydrolase
PFODIOPM_01102 1.5e-160 xerD L Phage integrase, N-terminal SAM-like domain
PFODIOPM_01103 5.2e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PFODIOPM_01104 7.3e-23
PFODIOPM_01105 5.6e-244 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PFODIOPM_01106 4.2e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PFODIOPM_01107 3.9e-122 trmK 2.1.1.217 S SAM-dependent methyltransferase
PFODIOPM_01108 3.1e-80 mutT 3.6.1.55 F NUDIX domain
PFODIOPM_01109 3.6e-138 S Peptidase family M23
PFODIOPM_01110 3.6e-126 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PFODIOPM_01112 1.4e-73 L Psort location Cytoplasmic, score
PFODIOPM_01113 8.4e-54
PFODIOPM_01114 0.0 res 3.1.21.5 L Type III restriction
PFODIOPM_01115 8.7e-257 mod 2.1.1.72 L DNA methylase
PFODIOPM_01116 1.1e-107 tmp1 S Domain of unknown function (DUF4391)
PFODIOPM_01117 1.8e-116 L helicase superfamily c-terminal domain
PFODIOPM_01118 2.5e-204 S Protein of unknown function DUF262
PFODIOPM_01119 3.1e-204 2.1.1.72 V type I restriction-modification system
PFODIOPM_01120 1e-35 mdt(A) EGP Major facilitator Superfamily
PFODIOPM_01121 0.0 copB 3.6.3.4 P P-type ATPase
PFODIOPM_01122 2.4e-37 celA 3.2.1.86 GT1 G beta-glucosidase activity
PFODIOPM_01123 4e-30 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PFODIOPM_01124 1.4e-204 K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PFODIOPM_01125 6.2e-202 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PFODIOPM_01126 5.8e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PFODIOPM_01127 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PFODIOPM_01128 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PFODIOPM_01129 1.3e-178 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PFODIOPM_01130 3.4e-135 recO L Involved in DNA repair and RecF pathway recombination
PFODIOPM_01131 2.8e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PFODIOPM_01132 2.9e-75 cdd 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PFODIOPM_01133 1e-98 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PFODIOPM_01134 3.5e-194 phoH T phosphate starvation-inducible protein PhoH
PFODIOPM_01135 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PFODIOPM_01136 1.5e-155 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PFODIOPM_01138 1.3e-162 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PFODIOPM_01139 6.3e-59 L An automated process has identified a potential problem with this gene model
PFODIOPM_01141 1.7e-08 secY2 U SecY translocase
PFODIOPM_01142 1.5e-225 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PFODIOPM_01143 1.2e-252 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PFODIOPM_01145 2.6e-121
PFODIOPM_01147 1.8e-175 lacX 5.1.3.3 G Aldose 1-epimerase
PFODIOPM_01148 1.8e-243 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PFODIOPM_01149 4e-90 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PFODIOPM_01150 1.8e-164 xerC D Phage integrase, N-terminal SAM-like domain
PFODIOPM_01151 6.1e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PFODIOPM_01152 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PFODIOPM_01153 5.2e-153 dprA LU DNA protecting protein DprA
PFODIOPM_01154 1.7e-137 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PFODIOPM_01155 2.2e-162 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PFODIOPM_01156 5.5e-36 yozE S Belongs to the UPF0346 family
PFODIOPM_01157 3.3e-155 DegV S Uncharacterised protein, DegV family COG1307
PFODIOPM_01158 6.2e-117 hlyIII S protein, hemolysin III
PFODIOPM_01159 4.1e-220 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PFODIOPM_01160 4.3e-169 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PFODIOPM_01161 2.1e-07 yliE T Putative diguanylate phosphodiesterase
PFODIOPM_01162 2.9e-53 yliE T EAL domain
PFODIOPM_01163 4.4e-07 yliE T Putative diguanylate phosphodiesterase
PFODIOPM_01165 0.0 XK27_10035 V ABC transporter
PFODIOPM_01166 1.1e-309 yfiB1 V ABC transporter, ATP-binding protein
PFODIOPM_01167 1.1e-164 lysR7 K LysR substrate binding domain
PFODIOPM_01168 1.2e-157
PFODIOPM_01169 1.6e-100 3.6.1.27 I Acid phosphatase homologues
PFODIOPM_01170 8.3e-151 yitS S Uncharacterised protein, DegV family COG1307
PFODIOPM_01171 1.7e-243 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PFODIOPM_01172 1.8e-53 S Protein of unknown function (DUF2752)
PFODIOPM_01173 3.6e-180 yjgN S Bacterial protein of unknown function (DUF898)
PFODIOPM_01174 1.6e-103 S Protein of unknown function (DUF4230)
PFODIOPM_01175 1.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PFODIOPM_01176 2e-259 glnPH2 P ABC transporter permease
PFODIOPM_01177 5.3e-161 lysR5 K LysR substrate binding domain
PFODIOPM_01178 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PFODIOPM_01179 3e-112 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PFODIOPM_01180 1.6e-184 S AI-2E family transporter
PFODIOPM_01181 2.3e-267 L Transposase
PFODIOPM_01182 5.3e-200 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PFODIOPM_01183 5.9e-155 czcD P cation diffusion facilitator family transporter
PFODIOPM_01184 2.5e-49 K DNA-binding transcription factor activity
PFODIOPM_01185 9.1e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PFODIOPM_01186 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PFODIOPM_01187 1.4e-122 srtA 3.4.22.70 M sortase family
PFODIOPM_01188 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PFODIOPM_01189 1.7e-170 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PFODIOPM_01190 0.0 dnaK O Heat shock 70 kDa protein
PFODIOPM_01191 4.5e-82 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PFODIOPM_01192 8.7e-190 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PFODIOPM_01193 1.5e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PFODIOPM_01194 9.9e-100 sip L Belongs to the 'phage' integrase family
PFODIOPM_01195 3.6e-40 L DDE superfamily endonuclease
PFODIOPM_01196 2e-118 L DDE superfamily endonuclease
PFODIOPM_01197 2.2e-229 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01198 6.8e-27 L Transposase
PFODIOPM_01199 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PFODIOPM_01200 1.3e-87 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PFODIOPM_01201 7.4e-32 S Uncharacterised protein family (UPF0236)
PFODIOPM_01202 2e-22
PFODIOPM_01203 3.9e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PFODIOPM_01204 7e-220 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PFODIOPM_01205 8.4e-54 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
PFODIOPM_01206 1.8e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PFODIOPM_01207 5.5e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PFODIOPM_01208 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PFODIOPM_01209 3.1e-41 rplGA J ribosomal protein
PFODIOPM_01210 4.3e-43 ylxR K Protein of unknown function (DUF448)
PFODIOPM_01211 6.8e-194 nusA K Participates in both transcription termination and antitermination
PFODIOPM_01212 1.9e-83 rimP J Required for maturation of 30S ribosomal subunits
PFODIOPM_01213 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PFODIOPM_01214 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PFODIOPM_01215 1e-229 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PFODIOPM_01216 1.1e-144 cdsA 2.7.7.41 S Belongs to the CDS family
PFODIOPM_01217 7.6e-124 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PFODIOPM_01218 2.9e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PFODIOPM_01219 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PFODIOPM_01220 5.4e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PFODIOPM_01221 1.1e-136 rpsB J Belongs to the universal ribosomal protein uS2 family
PFODIOPM_01222 2.2e-190 yabB 2.1.1.223 L Methyltransferase small domain
PFODIOPM_01223 1.4e-115 plsC 2.3.1.51 I Acyltransferase
PFODIOPM_01224 5.3e-181 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PFODIOPM_01225 3e-251 yclM 2.7.2.4 E Belongs to the aspartokinase family
PFODIOPM_01226 3.6e-213 hom 1.1.1.3 E homoserine dehydrogenase
PFODIOPM_01227 2.6e-71 pheB 5.4.99.5 S Belongs to the UPF0735 family
PFODIOPM_01228 5.5e-228 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01229 0.0 mdlB V ABC transporter
PFODIOPM_01230 0.0 mdlA V ABC transporter
PFODIOPM_01231 2.3e-31 yneF S Uncharacterised protein family (UPF0154)
PFODIOPM_01232 1.5e-33 ynzC S UPF0291 protein
PFODIOPM_01233 3.5e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PFODIOPM_01234 7.9e-149 glcU U ribose uptake protein RbsU
PFODIOPM_01235 4.2e-145 glnH ET ABC transporter substrate-binding protein
PFODIOPM_01236 3.4e-97
PFODIOPM_01237 0.0 lhr L DEAD DEAH box helicase
PFODIOPM_01238 5.2e-248 P P-loop Domain of unknown function (DUF2791)
PFODIOPM_01239 0.0 S TerB-C domain
PFODIOPM_01240 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
PFODIOPM_01241 5.5e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PFODIOPM_01242 0.0 snf 2.7.11.1 KL domain protein
PFODIOPM_01243 1.8e-09 CP_1020 S Psort location Cytoplasmic, score 8.87
PFODIOPM_01244 1.4e-138 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PFODIOPM_01245 4e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PFODIOPM_01246 3.8e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PFODIOPM_01247 1.2e-245 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PFODIOPM_01248 8.6e-54 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PFODIOPM_01249 5.3e-59 pipD E Dipeptidase
PFODIOPM_01250 9.7e-88 pipD E Dipeptidase
PFODIOPM_01251 6.1e-18 pipD E Dipeptidase
PFODIOPM_01253 5.2e-155 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PFODIOPM_01254 0.0 smc D Required for chromosome condensation and partitioning
PFODIOPM_01255 3.1e-127 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PFODIOPM_01256 0.0 oppA E ABC transporter substrate-binding protein
PFODIOPM_01257 0.0 oppA1 E ABC transporter substrate-binding protein
PFODIOPM_01258 1.3e-157 oppC P Binding-protein-dependent transport system inner membrane component
PFODIOPM_01259 1.3e-176 oppB P ABC transporter permease
PFODIOPM_01260 2.4e-178 oppF P Belongs to the ABC transporter superfamily
PFODIOPM_01261 3.7e-190 oppD P Belongs to the ABC transporter superfamily
PFODIOPM_01262 5.7e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PFODIOPM_01263 7.5e-183 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PFODIOPM_01264 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PFODIOPM_01265 1.6e-278 yloV S DAK2 domain fusion protein YloV
PFODIOPM_01266 8.8e-57 asp S Asp23 family, cell envelope-related function
PFODIOPM_01267 3.2e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PFODIOPM_01268 5.5e-281 V ABC transporter transmembrane region
PFODIOPM_01271 1.8e-30 D nuclear chromosome segregation
PFODIOPM_01273 1.1e-127 thiN 2.7.6.2 H thiamine pyrophosphokinase
PFODIOPM_01274 2.2e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PFODIOPM_01275 0.0 KLT serine threonine protein kinase
PFODIOPM_01276 6.2e-137 stp 3.1.3.16 T phosphatase
PFODIOPM_01277 4.1e-245 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PFODIOPM_01278 6.7e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PFODIOPM_01279 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PFODIOPM_01280 2.4e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PFODIOPM_01281 1.1e-110 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PFODIOPM_01282 2.6e-49
PFODIOPM_01283 3.2e-33 oppA E transmembrane transport
PFODIOPM_01284 2.9e-14 oppA E ABC transporter, substratebinding protein
PFODIOPM_01285 1.6e-46 oppA E transmembrane transport
PFODIOPM_01286 7e-306 recN L May be involved in recombinational repair of damaged DNA
PFODIOPM_01287 7.8e-154 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PFODIOPM_01288 5.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PFODIOPM_01289 1.7e-32 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PFODIOPM_01290 5.2e-251 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PFODIOPM_01291 4.3e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PFODIOPM_01292 1.8e-66 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PFODIOPM_01293 8.1e-73 yqhY S Asp23 family, cell envelope-related function
PFODIOPM_01294 2.4e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PFODIOPM_01295 5e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PFODIOPM_01296 2.1e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PFODIOPM_01297 9.9e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PFODIOPM_01298 5.1e-65 arsC 1.20.4.1 P Belongs to the ArsC family
PFODIOPM_01299 4e-90 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PFODIOPM_01300 2.6e-60 livF E ABC transporter
PFODIOPM_01301 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
PFODIOPM_01302 4.3e-294 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PFODIOPM_01303 1.4e-109 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PFODIOPM_01304 4.6e-199 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PFODIOPM_01305 6.6e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PFODIOPM_01306 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PFODIOPM_01307 5.2e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PFODIOPM_01308 2.8e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PFODIOPM_01309 1.6e-134 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PFODIOPM_01310 4.4e-252 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PFODIOPM_01311 2.5e-211 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PFODIOPM_01312 1.1e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PFODIOPM_01313 4.8e-41 XK27_05520 S Uncharacterized protein conserved in bacteria (DUF2087)
PFODIOPM_01314 2.2e-216 EGP Major Facilitator Superfamily
PFODIOPM_01315 1.2e-225
PFODIOPM_01316 0.0 S SH3-like domain
PFODIOPM_01317 0.0 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PFODIOPM_01319 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PFODIOPM_01320 1.3e-216 EGP Major facilitator Superfamily
PFODIOPM_01321 5e-150 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PFODIOPM_01322 4.7e-171 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PFODIOPM_01323 2.2e-71 L DDE superfamily endonuclease
PFODIOPM_01324 2.8e-14 L Transposase
PFODIOPM_01325 1e-231 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PFODIOPM_01326 8e-205 pepO 3.4.24.71 O Peptidase family M13
PFODIOPM_01327 8.5e-187 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PFODIOPM_01328 7.7e-58
PFODIOPM_01329 1.5e-112 L DDE superfamily endonuclease
PFODIOPM_01330 5.2e-104 L DDE superfamily endonuclease
PFODIOPM_01331 1.2e-227 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01332 2.9e-63 S Domain of unknown function DUF1828
PFODIOPM_01333 8.8e-218 EGP Major facilitator Superfamily
PFODIOPM_01334 2.8e-257 glnA 6.3.1.2 E glutamine synthetase
PFODIOPM_01335 3.4e-24 ynbB 4.4.1.1 P aluminum resistance
PFODIOPM_01336 1.2e-100 ynbB 4.4.1.1 P aluminum resistance
PFODIOPM_01337 5.2e-170 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PFODIOPM_01338 2.6e-70 yqhL P Rhodanese-like protein
PFODIOPM_01339 2.5e-33 yqgQ S Bacterial protein of unknown function (DUF910)
PFODIOPM_01340 1e-114 gluP 3.4.21.105 S Rhomboid family
PFODIOPM_01341 1.5e-103 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PFODIOPM_01342 7.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PFODIOPM_01343 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PFODIOPM_01344 0.0 S membrane
PFODIOPM_01345 5.3e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PFODIOPM_01346 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PFODIOPM_01347 2.1e-199 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PFODIOPM_01348 2e-61 yodB K Transcriptional regulator, HxlR family
PFODIOPM_01349 7.6e-135 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PFODIOPM_01350 2e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PFODIOPM_01351 4.4e-156 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PFODIOPM_01352 3e-290 arlS 2.7.13.3 T Histidine kinase
PFODIOPM_01353 2.9e-128 K response regulator
PFODIOPM_01354 8.4e-102 yceD S Uncharacterized ACR, COG1399
PFODIOPM_01355 1.9e-214 ylbM S Belongs to the UPF0348 family
PFODIOPM_01356 1.2e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PFODIOPM_01357 1.9e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PFODIOPM_01358 2.9e-119 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PFODIOPM_01359 1e-212 yqeH S Ribosome biogenesis GTPase YqeH
PFODIOPM_01360 1.1e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PFODIOPM_01361 1.8e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PFODIOPM_01362 2.6e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PFODIOPM_01363 2.9e-298 L Putative transposase DNA-binding domain
PFODIOPM_01364 5.4e-113 guaB2 L Resolvase, N terminal domain
PFODIOPM_01365 4.5e-274 S Archaea bacterial proteins of unknown function
PFODIOPM_01366 2.3e-32
PFODIOPM_01367 1.5e-43
PFODIOPM_01368 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PFODIOPM_01369 1.3e-168 dnaI L Primosomal protein DnaI
PFODIOPM_01370 3.4e-247 dnaB L Replication initiation and membrane attachment
PFODIOPM_01371 2.7e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PFODIOPM_01372 1.9e-101 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PFODIOPM_01373 9e-158 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PFODIOPM_01374 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PFODIOPM_01375 3.5e-39 EGP Major facilitator Superfamily
PFODIOPM_01376 2.7e-112 EGP Major facilitator Superfamily
PFODIOPM_01377 1.1e-42 EGP Major facilitator Superfamily
PFODIOPM_01378 2.9e-78 L COG2826 Transposase and inactivated derivatives, IS30 family
PFODIOPM_01379 4.8e-79 L Transposase and inactivated derivatives, IS30 family
PFODIOPM_01380 1.4e-48 1.3.5.4 C FAD dependent oxidoreductase
PFODIOPM_01381 6.8e-113 K Helix-turn-helix domain
PFODIOPM_01382 5.3e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PFODIOPM_01383 3.4e-120 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PFODIOPM_01384 1.2e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PFODIOPM_01385 5.2e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PFODIOPM_01386 1.1e-217 ecsB U ABC transporter
PFODIOPM_01387 1.8e-136 ecsA V ABC transporter, ATP-binding protein
PFODIOPM_01388 2.2e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
PFODIOPM_01389 8e-55
PFODIOPM_01390 2.3e-170 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PFODIOPM_01391 1.2e-132 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PFODIOPM_01392 2.3e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PFODIOPM_01393 1.1e-156 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PFODIOPM_01394 9.8e-52 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PFODIOPM_01395 1.1e-67 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F shikimate kinase activity
PFODIOPM_01396 1.1e-178 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PFODIOPM_01397 0.0 L AAA domain
PFODIOPM_01398 8.7e-226 yhaO L Ser Thr phosphatase family protein
PFODIOPM_01399 8.1e-55 yheA S Belongs to the UPF0342 family
PFODIOPM_01400 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PFODIOPM_01401 7.6e-160 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PFODIOPM_01402 3.9e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PFODIOPM_01403 4.4e-50 M ErfK YbiS YcfS YnhG
PFODIOPM_01404 1e-57 3.4.22.70 M Sortase family
PFODIOPM_01405 8.6e-58
PFODIOPM_01406 7e-55 L Putative transposase DNA-binding domain
PFODIOPM_01407 2e-48 L Putative transposase DNA-binding domain
PFODIOPM_01409 6.7e-231 M ErfK YbiS YcfS YnhG
PFODIOPM_01410 4.7e-157 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PFODIOPM_01411 8.1e-230 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PFODIOPM_01413 2.6e-86 1.2.3.3, 3.7.1.22 EH Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
PFODIOPM_01414 1.7e-47 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PFODIOPM_01415 2.8e-148 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PFODIOPM_01416 5.6e-150
PFODIOPM_01417 7.6e-67 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PFODIOPM_01418 7.5e-57 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PFODIOPM_01419 1.4e-158 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PFODIOPM_01420 4.4e-118 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PFODIOPM_01421 1.7e-293 ytgP S Polysaccharide biosynthesis protein
PFODIOPM_01422 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PFODIOPM_01423 2.5e-197 L Transposase and inactivated derivatives, IS30 family
PFODIOPM_01424 1.3e-119 3.6.1.27 I Acid phosphatase homologues
PFODIOPM_01425 3.4e-261 mdr EGP Sugar (and other) transporter
PFODIOPM_01426 1.1e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PFODIOPM_01434 1.8e-74
PFODIOPM_01435 8.8e-184 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PFODIOPM_01436 6.6e-119 dedA S SNARE-like domain protein
PFODIOPM_01437 3.5e-106 S Protein of unknown function (DUF1461)
PFODIOPM_01438 3.1e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PFODIOPM_01439 2.8e-83 yutD S Protein of unknown function (DUF1027)
PFODIOPM_01440 1.9e-280 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PFODIOPM_01441 5.6e-58
PFODIOPM_01442 4.9e-182 ccpA K catabolite control protein A
PFODIOPM_01443 1.8e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PFODIOPM_01445 1.4e-27 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PFODIOPM_01446 1.5e-40
PFODIOPM_01447 2.7e-09 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PFODIOPM_01448 2.7e-149 ykuT M mechanosensitive ion channel
PFODIOPM_01449 6.7e-113 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PFODIOPM_01450 1.7e-66 yslB S Protein of unknown function (DUF2507)
PFODIOPM_01451 2.7e-54 trxA O Belongs to the thioredoxin family
PFODIOPM_01452 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PFODIOPM_01453 1e-40 yrzB S Belongs to the UPF0473 family
PFODIOPM_01454 3.9e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PFODIOPM_01455 5.7e-42 yrzL S Belongs to the UPF0297 family
PFODIOPM_01456 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PFODIOPM_01457 1.1e-224 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PFODIOPM_01458 4.1e-178 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PFODIOPM_01459 6.4e-207 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PFODIOPM_01460 7.9e-282 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PFODIOPM_01461 2.7e-35 yajC U Preprotein translocase
PFODIOPM_01462 1.6e-185 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PFODIOPM_01463 6.4e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PFODIOPM_01464 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PFODIOPM_01465 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PFODIOPM_01466 1.8e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PFODIOPM_01467 8.8e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PFODIOPM_01468 1e-122 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PFODIOPM_01469 2.3e-302 uup S ABC transporter, ATP-binding protein
PFODIOPM_01470 5.8e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PFODIOPM_01471 3.1e-95 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PFODIOPM_01472 4.2e-127 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PFODIOPM_01473 2e-89 folT S ECF transporter, substrate-specific component
PFODIOPM_01474 7.5e-89 folT S ECF transporter, substrate-specific component
PFODIOPM_01475 7.5e-89 folT S ECF transporter, substrate-specific component
PFODIOPM_01476 2.7e-145 fat 3.1.2.21 I Acyl-ACP thioesterase
PFODIOPM_01477 8.6e-159 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PFODIOPM_01478 9.9e-55 yabA L Involved in initiation control of chromosome replication
PFODIOPM_01479 1.9e-161 holB 2.7.7.7 L DNA polymerase III
PFODIOPM_01480 2.4e-53 yaaQ S Cyclic-di-AMP receptor
PFODIOPM_01481 5.3e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PFODIOPM_01482 1.1e-34 S Protein of unknown function (DUF2508)
PFODIOPM_01483 1.5e-106 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PFODIOPM_01484 3.5e-52 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PFODIOPM_01485 1.4e-288 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PFODIOPM_01486 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PFODIOPM_01487 7.2e-112 rsmC 2.1.1.172 J Methyltransferase
PFODIOPM_01488 1.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PFODIOPM_01489 9.1e-173
PFODIOPM_01490 1.2e-45
PFODIOPM_01491 1.9e-14 L Helix-turn-helix domain
PFODIOPM_01492 2.3e-267 L Transposase
PFODIOPM_01493 1.8e-33
PFODIOPM_01494 2.1e-122 4.2.99.20 S Alpha/beta hydrolase family
PFODIOPM_01495 1.9e-83 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PFODIOPM_01496 7.2e-112 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PFODIOPM_01497 2.3e-32 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PFODIOPM_01498 1e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PFODIOPM_01499 1.8e-23 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PFODIOPM_01500 5.2e-101 nusG K Participates in transcription elongation, termination and antitermination
PFODIOPM_01501 6.9e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PFODIOPM_01502 2e-121 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PFODIOPM_01503 4.9e-190 S Glycosyl transferase family 2
PFODIOPM_01504 4.6e-230 amtB P ammonium transporter
PFODIOPM_01505 8.5e-69
PFODIOPM_01506 1.4e-86 L Putative transposase DNA-binding domain
PFODIOPM_01507 2.7e-136 L Putative transposase DNA-binding domain
PFODIOPM_01508 1.1e-81 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PFODIOPM_01509 1.8e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PFODIOPM_01510 4.7e-85 oppA E ABC transporter, substratebinding protein
PFODIOPM_01511 6.7e-147 oppA E ABC transporter, substratebinding protein
PFODIOPM_01512 4.6e-14 P nitric oxide dioxygenase activity
PFODIOPM_01513 3.9e-84 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PFODIOPM_01515 2.8e-24 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
PFODIOPM_01516 1.6e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PFODIOPM_01517 4.2e-214 pbpX1 V Beta-lactamase
PFODIOPM_01518 4.6e-205 pbpX1 V Beta-lactamase
PFODIOPM_01519 2.3e-267 L Transposase
PFODIOPM_01520 2.4e-101 yvrI K sigma factor activity
PFODIOPM_01521 2.5e-138 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PFODIOPM_01522 6.1e-76 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PFODIOPM_01523 1.1e-275 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PFODIOPM_01524 3.6e-105 F NUDIX domain
PFODIOPM_01525 1.6e-160 K LysR substrate binding domain
PFODIOPM_01526 1.2e-180 yeiH S Conserved hypothetical protein 698
PFODIOPM_01527 1.1e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PFODIOPM_01529 5.7e-121 skfE V ATPases associated with a variety of cellular activities
PFODIOPM_01530 8.7e-60 yvoA_1 K Transcriptional regulator, GntR family
PFODIOPM_01531 3.4e-220 oppA E ABC transporter, substratebinding protein
PFODIOPM_01532 4.3e-49 oppA E ABC transporter, substratebinding protein
PFODIOPM_01533 3.4e-94 3.6.1.13 L COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PFODIOPM_01534 2.2e-232 6.3.2.4 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PFODIOPM_01535 1e-27 6.3.4.18, 6.3.5.5 F 5-(carboxyamino)imidazole ribonucleotide synthase activity
PFODIOPM_01536 3.1e-13 6.3.4.18, 6.3.5.5 F 5-(carboxyamino)imidazole ribonucleotide synthase activity
PFODIOPM_01537 8.5e-159 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PFODIOPM_01538 1.2e-199
PFODIOPM_01539 4.9e-213 EGP Transmembrane secretion effector
PFODIOPM_01540 6e-213 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PFODIOPM_01541 3.4e-73 2.7.13.3 T diguanylate cyclase
PFODIOPM_01542 2.8e-19 5.99.1.2 T diguanylate cyclase
PFODIOPM_01543 3.7e-16 5.99.1.2 T diguanylate cyclase
PFODIOPM_01544 3.1e-110 T EAL domain
PFODIOPM_01545 4.8e-11 5.99.1.2 T diguanylate cyclase
PFODIOPM_01546 1.3e-85 S ECF-type riboflavin transporter, S component
PFODIOPM_01547 1e-262 adhE 1.1.1.1, 1.2.1.10 C Aldehyde dehydrogenase family
PFODIOPM_01548 1.5e-144 cbiQ P cobalt transport
PFODIOPM_01549 0.0 ykoD P ABC transporter, ATP-binding protein
PFODIOPM_01550 1.3e-99 S UPF0397 protein
PFODIOPM_01551 8.4e-159 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
PFODIOPM_01552 1.7e-254 cycA E Amino acid permease
PFODIOPM_01553 0.0 S ABC-type transport system involved in multi-copper enzyme maturation permease component
PFODIOPM_01554 1.2e-168 ytrB V ABC transporter
PFODIOPM_01555 6.1e-61 ytrA K helix_turn_helix gluconate operon transcriptional repressor
PFODIOPM_01562 1.8e-74
PFODIOPM_01563 2.1e-137 yliE T Putative diguanylate phosphodiesterase
PFODIOPM_01564 1.2e-64 yliE T domain protein
PFODIOPM_01565 3.2e-183 arbY M Glycosyl transferase family 8
PFODIOPM_01566 6.6e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PFODIOPM_01567 1.7e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PFODIOPM_01568 5.4e-49
PFODIOPM_01569 3.6e-265 pepC 3.4.22.40 E Peptidase C1-like family
PFODIOPM_01571 2.4e-183 S AAA domain
PFODIOPM_01572 2.1e-79 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PFODIOPM_01573 2.8e-125 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PFODIOPM_01574 5.2e-29
PFODIOPM_01575 2.6e-28
PFODIOPM_01576 4.7e-128 pgm3 G Belongs to the phosphoglycerate mutase family
PFODIOPM_01577 1.7e-51 S membrane transporter protein
PFODIOPM_01578 4.4e-37 S membrane transporter protein
PFODIOPM_01579 1e-107 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PFODIOPM_01580 3.4e-94 wecD K Acetyltransferase (GNAT) family
PFODIOPM_01581 4.8e-196 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PFODIOPM_01582 8.8e-09 3.5.2.6 V Beta-lactamase
PFODIOPM_01583 2.8e-38 3.5.2.6 V Beta-lactamase
PFODIOPM_01584 1.8e-136 ybbH_2 K Helix-turn-helix domain, rpiR family
PFODIOPM_01585 1.4e-275 pepV 3.5.1.18 E dipeptidase PepV
PFODIOPM_01586 1.7e-47 cycA E Amino acid permease
PFODIOPM_01587 1.4e-165 cycA E Amino acid permease
PFODIOPM_01588 3.4e-08 lacR K DeoR C terminal sensor domain
PFODIOPM_01589 8e-252 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
PFODIOPM_01590 5.6e-145 D nuclear chromosome segregation
PFODIOPM_01591 8.7e-82 M LysM domain protein
PFODIOPM_01596 3.6e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PFODIOPM_01597 4.3e-283 thrC 4.2.3.1 E Threonine synthase
PFODIOPM_01601 2.7e-99 K Acetyltransferase (GNAT) domain
PFODIOPM_01602 9.9e-106 yiiE S Protein of unknown function (DUF1211)
PFODIOPM_01603 1.1e-23
PFODIOPM_01604 4.6e-154 scrR K Transcriptional regulator, LacI family
PFODIOPM_01605 1.1e-128 scrB 3.2.1.26 GH32 G invertase
PFODIOPM_01606 1e-78 2.7.1.199, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PFODIOPM_01607 1.9e-200 pfkA 2.7.1.11, 2.7.1.90 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PFODIOPM_01608 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PFODIOPM_01609 6.5e-127 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PFODIOPM_01610 6.2e-81 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PFODIOPM_01611 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PFODIOPM_01612 1e-276 E Amino acid permease
PFODIOPM_01613 4.9e-101 L COG2826 Transposase and inactivated derivatives, IS30 family
PFODIOPM_01614 2.2e-205 G Major Facilitator Superfamily
PFODIOPM_01615 2.9e-38 L COG2963 Transposase and inactivated derivatives
PFODIOPM_01616 1.9e-207 G Major Facilitator Superfamily
PFODIOPM_01617 4e-203 L COG2826 Transposase and inactivated derivatives, IS30 family
PFODIOPM_01619 3.2e-71 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
PFODIOPM_01620 2.7e-99 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
PFODIOPM_01621 2.8e-21 malS 3.2.1.1 GH13 G Glycogen debranching enzyme, glucanotransferase domain
PFODIOPM_01622 1.5e-220 oxlT P Major Facilitator Superfamily
PFODIOPM_01624 1.3e-18 K sequence-specific DNA binding
PFODIOPM_01625 2.4e-47
PFODIOPM_01626 0.0 recQ1 L Helicase conserved C-terminal domain
PFODIOPM_01627 2.2e-229 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01628 2.1e-182 recQ1 L Helicase conserved C-terminal domain
PFODIOPM_01629 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PFODIOPM_01630 1.6e-07 K Helix-turn-helix domain
PFODIOPM_01632 2.5e-163 3.5.2.6 M NlpC/P60 family
PFODIOPM_01633 4.5e-247 cycA E Amino acid permease
PFODIOPM_01635 1.6e-63 manO S Domain of unknown function (DUF956)
PFODIOPM_01636 3.9e-170 manN G system, mannose fructose sorbose family IID component
PFODIOPM_01637 1.1e-139 manY G PTS system
PFODIOPM_01638 3.6e-188 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PFODIOPM_01639 2.9e-224 L DDE superfamily endonuclease
PFODIOPM_01640 2.2e-229 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01641 3.4e-26 L DDE superfamily endonuclease
PFODIOPM_01643 8.6e-59 L Putative transposase DNA-binding domain
PFODIOPM_01644 1.3e-246 nhaC C Na H antiporter NhaC
PFODIOPM_01646 1.8e-74
PFODIOPM_01647 1.5e-73 cydD V abc transporter atp-binding protein
PFODIOPM_01648 1.4e-275 sufB O assembly protein SufB
PFODIOPM_01649 4.3e-74 nifU C SUF system FeS assembly protein, NifU family
PFODIOPM_01650 4.3e-225 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PFODIOPM_01651 4e-220 sufD O FeS assembly protein SufD
PFODIOPM_01652 2.7e-143 sufC O FeS assembly ATPase SufC
PFODIOPM_01653 3.6e-82 yjcF S Acetyltransferase (GNAT) domain
PFODIOPM_01654 3.3e-83 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PFODIOPM_01655 6.2e-82
PFODIOPM_01656 7e-21 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PFODIOPM_01658 4.9e-117 V ABC transporter, ATP-binding protein
PFODIOPM_01659 1.9e-215 S FtsX-like permease family
PFODIOPM_01662 8e-79 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PFODIOPM_01663 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PFODIOPM_01664 2.9e-29 secG U Preprotein translocase
PFODIOPM_01665 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PFODIOPM_01666 7.4e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PFODIOPM_01667 2.2e-201 cpoA GT4 M Glycosyltransferase, group 1 family protein
PFODIOPM_01668 5.8e-219 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PFODIOPM_01695 2e-105 E Arginine ornithine antiporter
PFODIOPM_01696 4.8e-48 E Arginine ornithine antiporter
PFODIOPM_01697 3.5e-14 XK27_07210 6.1.1.6 S B3 4 domain
PFODIOPM_01698 7.1e-203 S amidohydrolase
PFODIOPM_01702 1.8e-74
PFODIOPM_01703 2.3e-267 L Transposase
PFODIOPM_01704 3.7e-154 S Protein of unknown function (DUF3298)
PFODIOPM_01705 6.5e-99 K Sigma-70 region 2
PFODIOPM_01706 5.9e-236 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PFODIOPM_01707 6.1e-93 J Acetyltransferase (GNAT) domain
PFODIOPM_01708 2.9e-105 yjbF S SNARE associated Golgi protein
PFODIOPM_01709 1.5e-152 I alpha/beta hydrolase fold
PFODIOPM_01710 1.4e-156 hipB K Helix-turn-helix
PFODIOPM_01711 8.6e-95 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PFODIOPM_01712 3.8e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
PFODIOPM_01713 1e-75 L COG2826 Transposase and inactivated derivatives, IS30 family
PFODIOPM_01714 3.5e-41 L Transposase and inactivated derivatives, IS30 family
PFODIOPM_01715 2.2e-175
PFODIOPM_01716 0.0 ydgH S MMPL family
PFODIOPM_01717 2.3e-99 yobS K Bacterial regulatory proteins, tetR family
PFODIOPM_01718 5.5e-26
PFODIOPM_01719 3.8e-157 3.5.2.6 V Beta-lactamase enzyme family
PFODIOPM_01720 6.7e-154 corA P CorA-like Mg2+ transporter protein
PFODIOPM_01721 2.3e-267 L Transposase
PFODIOPM_01722 4.6e-176 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PFODIOPM_01723 3.2e-89 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PFODIOPM_01724 4.4e-106
PFODIOPM_01725 2.6e-42 E dipeptidase activity
PFODIOPM_01726 1.5e-123 endA F DNA RNA non-specific endonuclease
PFODIOPM_01727 4.5e-157 dkg S reductase
PFODIOPM_01729 1.2e-35 GK ROK family
PFODIOPM_01730 1.4e-38 GK ROK family
PFODIOPM_01731 6e-09 S PAS domain
PFODIOPM_01732 3.3e-289 V ABC transporter transmembrane region
PFODIOPM_01733 1.8e-108 L COG2826 Transposase and inactivated derivatives, IS30 family
PFODIOPM_01734 1.4e-14 L the current gene model (or a revised gene model) may contain a frame shift
PFODIOPM_01735 1.2e-197
PFODIOPM_01736 1.1e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PFODIOPM_01737 1.6e-76 ymfM S Helix-turn-helix domain
PFODIOPM_01738 1.4e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PFODIOPM_01739 1e-170 coaA 2.7.1.33 F Pantothenic acid kinase
PFODIOPM_01740 5.7e-103 E GDSL-like Lipase/Acylhydrolase
PFODIOPM_01741 4.4e-74 XK27_02470 K LytTr DNA-binding domain
PFODIOPM_01742 1e-11 liaI S membrane
PFODIOPM_01743 1.8e-84 aatB ET ABC transporter substrate-binding protein
PFODIOPM_01744 5.5e-49 aatB ET ABC transporter substrate-binding protein
PFODIOPM_01745 5e-41 glnQ 3.6.3.21 E ABC transporter
PFODIOPM_01746 0.0 helD 3.6.4.12 L DNA helicase
PFODIOPM_01747 4.9e-114 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PFODIOPM_01748 4e-124 pgm3 G Phosphoglycerate mutase family
PFODIOPM_01749 8.4e-133 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PFODIOPM_01751 1.9e-219 3.1.4.46 C glycerophosphodiester phosphodiesterase activity
PFODIOPM_01752 2.3e-267 L Transposase
PFODIOPM_01753 2.3e-267 L Transposase
PFODIOPM_01754 1.3e-10 sidC L DNA recombination
PFODIOPM_01755 1.7e-116 L DNA recombination
PFODIOPM_01756 1.3e-16 sidC L DNA recombination
PFODIOPM_01757 9.1e-59 sidC L DNA recombination
PFODIOPM_01758 9.9e-129 S VanZ like family
PFODIOPM_01759 9.4e-74 mesH S Teichoic acid glycosylation protein
PFODIOPM_01760 2.7e-79 S VanZ like family
PFODIOPM_01762 1.9e-77 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01763 1.3e-142 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01764 2e-85 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PFODIOPM_01765 1.1e-180 M LicD family
PFODIOPM_01766 7.3e-264 epsIIL S Membrane protein involved in the export of O-antigen and teichoic acid
PFODIOPM_01767 9e-71 wbbI M transferase activity, transferring glycosyl groups
PFODIOPM_01768 8.7e-08 wzy S EpsG family
PFODIOPM_01769 2.3e-147 M Domain of unknown function (DUF4422)
PFODIOPM_01770 2.3e-212 M Glycosyl transferases group 1
PFODIOPM_01771 3.2e-172 glfT1 1.1.1.133 S Glycosyltransferase like family 2
PFODIOPM_01772 5.5e-86 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PFODIOPM_01773 3e-89 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PFODIOPM_01774 6.6e-220 glf 5.4.99.9 M UDP-galactopyranose mutase
PFODIOPM_01775 2.2e-150 cps1D M Domain of unknown function (DUF4422)
PFODIOPM_01776 6.5e-119 rfbP 2.7.8.6 M Bacterial sugar transferase
PFODIOPM_01777 6.4e-141 S Core-2/I-Branching enzyme
PFODIOPM_01778 1.9e-177 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PFODIOPM_01780 1.7e-33 F DNA/RNA non-specific endonuclease
PFODIOPM_01781 1.5e-39
PFODIOPM_01782 1e-14
PFODIOPM_01783 2.7e-58 K sequence-specific DNA binding
PFODIOPM_01784 4.5e-183 gpsA 1.1.1.94 I Rossmann-like domain
PFODIOPM_01785 2e-40 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PFODIOPM_01786 1.1e-54 C Coenzyme F420-dependent N5N10-methylene tetrahydromethanopterin reductase
PFODIOPM_01787 4e-11 N phage tail tape measure protein
PFODIOPM_01788 1.2e-91 L the current gene model (or a revised gene model) may contain a frame shift
PFODIOPM_01789 1.4e-42 L Transposase
PFODIOPM_01790 1.1e-26
PFODIOPM_01791 9.4e-18 S ABC transporter, ATP-binding protein
PFODIOPM_01792 1.3e-16 S ABC transporter, ATP-binding protein
PFODIOPM_01793 3.1e-77 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PFODIOPM_01795 5.2e-200 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PFODIOPM_01796 3.3e-59 K Bacterial regulatory proteins, tetR family
PFODIOPM_01797 7.2e-56 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PFODIOPM_01798 9.1e-118 mcrC V McrBC 5-methylcytosine restriction system component
PFODIOPM_01799 0.0 mcrB V AAA domain (dynein-related subfamily)
PFODIOPM_01800 1.3e-254 L Transposase and inactivated derivatives
PFODIOPM_01801 6.2e-202 S Membrane protein involved in the export of O-antigen and teichoic acid
PFODIOPM_01802 4.9e-70 L Transposase
PFODIOPM_01803 1.4e-46 L Winged helix-turn helix
PFODIOPM_01804 1.8e-77 L DDE superfamily endonuclease
PFODIOPM_01805 3.8e-49 M Glycosyltransferase, group 2 family protein
PFODIOPM_01806 2e-53 L Transposase
PFODIOPM_01807 5.1e-33 L Transposase
PFODIOPM_01809 7.4e-47 MA20_43635 M Capsular polysaccharide synthesis protein
PFODIOPM_01810 6e-76
PFODIOPM_01811 4.4e-63 M Glycosyltransferase like family 2
PFODIOPM_01812 2.3e-55 GT4 M Psort location Cytoplasmic, score 8.87
PFODIOPM_01813 5.3e-147 L Transposase and inactivated derivatives, IS30 family
PFODIOPM_01814 2.5e-81 M Glycosyl transferases group 1
PFODIOPM_01815 9.4e-158 2.4.1.21 GT4,GT5 G Glycosyl transferases group 1
PFODIOPM_01816 1.1e-121 rfbP M Bacterial sugar transferase
PFODIOPM_01817 4.4e-146 ywqE 3.1.3.48 GM PHP domain protein
PFODIOPM_01818 2.6e-114 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PFODIOPM_01819 1.4e-108 epsB M biosynthesis protein
PFODIOPM_01820 2.2e-177 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PFODIOPM_01821 4.9e-227 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PFODIOPM_01822 1.3e-116 M NlpC P60 family protein
PFODIOPM_01823 9.4e-93 M NlpC P60 family protein
PFODIOPM_01824 4.8e-31 M NlpC P60 family protein
PFODIOPM_01825 2.3e-51 M NlpC P60 family protein
PFODIOPM_01826 1.8e-107 M NlpC P60 family protein
PFODIOPM_01827 2.3e-81 M NlpC/P60 family
PFODIOPM_01828 2.1e-199 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PFODIOPM_01829 5.6e-83 M NlpC P60 family
PFODIOPM_01830 2.9e-96 gmk2 2.7.4.8 F Guanylate kinase homologues.
PFODIOPM_01831 7.2e-45
PFODIOPM_01832 8.3e-290 S O-antigen ligase like membrane protein
PFODIOPM_01833 2.2e-111
PFODIOPM_01834 1.4e-68
PFODIOPM_01835 2.7e-85 S Threonine/Serine exporter, ThrE
PFODIOPM_01836 7e-136 thrE S Putative threonine/serine exporter
PFODIOPM_01837 9.5e-294 S ABC transporter, ATP-binding protein
PFODIOPM_01838 2.7e-16
PFODIOPM_01839 1.1e-206 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PFODIOPM_01840 2.2e-251 L Putative transposase DNA-binding domain
PFODIOPM_01841 0.0 pepF E oligoendopeptidase F
PFODIOPM_01842 5.9e-59 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PFODIOPM_01843 5.6e-79 KT response to antibiotic
PFODIOPM_01844 8e-135 znuB U ABC 3 transport family
PFODIOPM_01845 1.3e-119 fhuC P ABC transporter
PFODIOPM_01846 5e-145 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
PFODIOPM_01847 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PFODIOPM_01848 1e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PFODIOPM_01849 2.8e-134 fruR K DeoR C terminal sensor domain
PFODIOPM_01850 1.4e-144 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PFODIOPM_01851 6.4e-298 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PFODIOPM_01852 6.5e-221 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PFODIOPM_01853 1e-122 K response regulator
PFODIOPM_01854 0.0 ndvA V ABC transporter
PFODIOPM_01855 2.4e-311 V ABC transporter, ATP-binding protein
PFODIOPM_01856 1.8e-136 XK27_01040 S Protein of unknown function (DUF1129)
PFODIOPM_01857 6.1e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PFODIOPM_01858 2.5e-45 yyzM S Bacterial protein of unknown function (DUF951)
PFODIOPM_01859 3.1e-156 spo0J K Belongs to the ParB family
PFODIOPM_01860 2.6e-138 soj D Sporulation initiation inhibitor
PFODIOPM_01861 3.3e-144 noc K Belongs to the ParB family
PFODIOPM_01862 7.4e-132 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PFODIOPM_01863 2.4e-87 cvpA S Colicin V production protein
PFODIOPM_01864 2e-188 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PFODIOPM_01865 3e-142 3.1.3.48 T Tyrosine phosphatase family
PFODIOPM_01866 5e-96 azr 1.5.1.36 S NADPH-dependent FMN reductase
PFODIOPM_01867 8.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PFODIOPM_01868 1.5e-97 K WHG domain
PFODIOPM_01869 1.8e-275 pipD E Dipeptidase
PFODIOPM_01870 1.5e-16
PFODIOPM_01871 6.9e-116 V AAA domain, putative AbiEii toxin, Type IV TA system
PFODIOPM_01872 5e-103
PFODIOPM_01874 9.4e-128
PFODIOPM_01876 5.6e-86 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PFODIOPM_01877 6e-11 K LytTr DNA-binding domain
PFODIOPM_01878 1.3e-66 S pyridoxamine 5-phosphate
PFODIOPM_01879 8e-171 K WYL domain
PFODIOPM_01880 4.4e-118 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PFODIOPM_01881 7e-187 hrtB V ABC transporter permease
PFODIOPM_01882 2.7e-88 ygfC K transcriptional regulator (TetR family)
PFODIOPM_01883 2e-129 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PFODIOPM_01884 1.2e-137 S Belongs to the UPF0246 family
PFODIOPM_01885 6e-117
PFODIOPM_01886 8.6e-226 S Putative peptidoglycan binding domain
PFODIOPM_01887 4.6e-35 drgA C coenzyme F420-1:gamma-L-glutamate ligase activity
PFODIOPM_01888 0.0 pepN 3.4.11.2 E aminopeptidase
PFODIOPM_01889 7e-35 lysM M LysM domain
PFODIOPM_01890 1.5e-172 citR K Putative sugar-binding domain
PFODIOPM_01891 3.2e-253 pipD M Peptidase family C69
PFODIOPM_01893 5.5e-256 P Sodium:sulfate symporter transmembrane region
PFODIOPM_01894 2.3e-267 L Transposase
PFODIOPM_01895 2.5e-264 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PFODIOPM_01897 1.1e-151
PFODIOPM_01898 4.8e-35
PFODIOPM_01899 4.4e-91 ymdB S Macro domain protein
PFODIOPM_01900 2.7e-143 ptp2 3.1.3.48 T Tyrosine phosphatase family
PFODIOPM_01901 7.2e-289 V ABC-type multidrug transport system, ATPase and permease components
PFODIOPM_01902 0.0 KLT serine threonine protein kinase
PFODIOPM_01903 2.5e-32 KLT serine threonine protein kinase
PFODIOPM_01904 4e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
PFODIOPM_01905 2.4e-144 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PFODIOPM_01906 2.5e-27 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PFODIOPM_01907 1.4e-129 cobQ S glutamine amidotransferase
PFODIOPM_01908 8.6e-37
PFODIOPM_01909 0.0 clpL O C-terminal, D2-small domain, of ClpB protein
PFODIOPM_01910 2.8e-72 5.99.1.2 T diguanylate cyclase
PFODIOPM_01911 7e-25 5.99.1.2 T diguanylate cyclase
PFODIOPM_01912 1.2e-66 brnQ U Component of the transport system for branched-chain amino acids
PFODIOPM_01913 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PFODIOPM_01914 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PFODIOPM_01915 2.6e-208 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PFODIOPM_01916 1.8e-30 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PFODIOPM_01917 1.9e-183 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PFODIOPM_01918 3.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PFODIOPM_01919 2.8e-168 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PFODIOPM_01920 6.8e-27 L DDE superfamily endonuclease
PFODIOPM_01921 2.2e-229 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01922 7.3e-56 L Transposase
PFODIOPM_01923 9e-31 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
PFODIOPM_01924 6.8e-44 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PFODIOPM_01925 5.3e-159 yicL EG EamA-like transporter family
PFODIOPM_01926 7.5e-25 puuD S peptidase C26
PFODIOPM_01927 2.9e-83 puuD S peptidase C26
PFODIOPM_01928 5.7e-149 S Sucrose-6F-phosphate phosphohydrolase
PFODIOPM_01929 8.1e-165 S Alpha/beta hydrolase of unknown function (DUF915)
PFODIOPM_01930 1e-240 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PFODIOPM_01933 1.8e-74
PFODIOPM_01934 8.5e-116 K Bacterial regulatory proteins, tetR family
PFODIOPM_01935 0.0 yhcA V ABC transporter, ATP-binding protein
PFODIOPM_01936 3.8e-66 S Iron-sulphur cluster biosynthesis
PFODIOPM_01937 7.3e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PFODIOPM_01938 2e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PFODIOPM_01939 2.3e-267 L Transposase
PFODIOPM_01940 2.2e-240 dltB M MBOAT, membrane-bound O-acyltransferase family
PFODIOPM_01941 4.4e-296 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PFODIOPM_01943 7.4e-49
PFODIOPM_01944 1.3e-226 ywhK S Membrane
PFODIOPM_01945 3.6e-39 L An automated process has identified a potential problem with this gene model
PFODIOPM_01947 1.4e-207 M Glycosyl transferase family group 2
PFODIOPM_01948 9.7e-36 ecoRVR L Restriction endonuclease EcoRV
PFODIOPM_01949 2.3e-226 L COG3547 Transposase and inactivated derivatives
PFODIOPM_01950 2e-40 L An automated process has identified a potential problem with this gene model
PFODIOPM_01951 3.6e-85 ykuL S (CBS) domain
PFODIOPM_01952 0.0 cadA P P-type ATPase
PFODIOPM_01953 3.2e-201 napA P Sodium/hydrogen exchanger family
PFODIOPM_01954 2.2e-122 S CAAX protease self-immunity
PFODIOPM_01955 1.2e-200 S DUF218 domain
PFODIOPM_01956 2.1e-194 tcsA S ABC transporter substrate-binding protein PnrA-like
PFODIOPM_01958 4e-66 S Psort location Cytoplasmic, score
PFODIOPM_01959 2e-130 KLT Protein tyrosine kinase
PFODIOPM_01960 2.3e-32 KLT Protein tyrosine kinase
PFODIOPM_01961 1e-70 S Domain of unknown function (DUF4352)
PFODIOPM_01962 6.3e-191 tcsA S ABC transporter substrate-binding protein PnrA-like
PFODIOPM_01963 2.3e-193 tcsA S ABC transporter substrate-binding protein PnrA-like
PFODIOPM_01964 2.1e-285 xylG 3.6.3.17 S ABC transporter
PFODIOPM_01965 6.8e-204 yufP S Belongs to the binding-protein-dependent transport system permease family
PFODIOPM_01966 1.7e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
PFODIOPM_01967 3.5e-09 EGP Major facilitator Superfamily
PFODIOPM_01969 2.4e-158 yeaE S Aldo/keto reductase family
PFODIOPM_01970 1.3e-125 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PFODIOPM_01972 1.2e-13 L PFAM Integrase catalytic region
PFODIOPM_01974 3.4e-166 3.2.1.17 M peptidoglycan-binding domain-containing protein
PFODIOPM_01975 5.8e-39
PFODIOPM_01976 5.8e-123 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PFODIOPM_01977 3.7e-128 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PFODIOPM_01978 3.8e-268 glnP P ABC transporter
PFODIOPM_01979 5.5e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PFODIOPM_01980 8.2e-230 pbuG S permease
PFODIOPM_01981 4.7e-285 clcA P chloride
PFODIOPM_01982 5.1e-17 lmrA 3.6.3.44 V ABC transporter
PFODIOPM_01983 1e-70
PFODIOPM_01984 7.5e-92
PFODIOPM_01985 2.3e-267 L Transposase
PFODIOPM_01986 5.8e-48
PFODIOPM_01987 9.5e-269 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PFODIOPM_01988 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PFODIOPM_01989 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PFODIOPM_01990 1.1e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PFODIOPM_01991 2.6e-147 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PFODIOPM_01992 1.4e-62 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PFODIOPM_01993 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)