| ORF_ID | e_value | Gene_name | EC_number | CAZy | COGs | Description |
|---|---|---|---|---|---|---|
| GMPIBKBJ_00001 | 3.6e-35 | rpsR | J | Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit | ||
| GMPIBKBJ_00002 | 3.1e-79 | ssb | L | Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism | ||
| GMPIBKBJ_00003 | 4.2e-49 | rpsF | J | Binds together with S18 to 16S ribosomal RNA | ||
| GMPIBKBJ_00004 | 0.0 | gyrA | 5.99.1.3 | L | A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner | |
| GMPIBKBJ_00005 | 0.0 | gyrB | 5.99.1.3 | L | A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner | |
| GMPIBKBJ_00006 | 1.1e-209 | recF | L | it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP | ||
| GMPIBKBJ_00007 | 1.3e-34 | yaaA | S | S4 domain protein YaaA | ||
| GMPIBKBJ_00008 | 3.9e-196 | dnaN | 2.7.7.7 | L | Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria | |
| GMPIBKBJ_00009 | 6.8e-259 | dnaA | L | it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids | ||
| GMPIBKBJ_00010 | 1.1e-15 | rpmH | J | Belongs to the bacterial ribosomal protein bL34 family | ||
| GMPIBKBJ_00011 | 2.7e-61 | rnpA | 3.1.26.5 | J | RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme | |
| GMPIBKBJ_00012 | 6.4e-146 | yidC | U | Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins | ||
| GMPIBKBJ_00013 | 5.6e-253 | mnmE | S | Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 | ||
| GMPIBKBJ_00014 | 0.0 | gidA | D | NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 | ||
| GMPIBKBJ_00015 | 2.2e-273 | gnd | 1.1.1.343, 1.1.1.44 | H | Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH | |
| GMPIBKBJ_00016 | 8.4e-290 | clcA | P | chloride | ||
| GMPIBKBJ_00017 | 1.7e-212 | |||||
| GMPIBKBJ_00018 | 1.2e-18 | |||||
| GMPIBKBJ_00019 | 3.4e-156 | EGP | Sugar (and other) transporter | |||
| GMPIBKBJ_00020 | 2.2e-36 | EGP | Sugar (and other) transporter | |||
| GMPIBKBJ_00021 | 0.0 | copA | 3.6.3.54 | P | P-type ATPase | |
| GMPIBKBJ_00022 | 5.4e-49 | silP | 1.9.3.1, 3.6.3.54 | S | Cupredoxin-like domain | |
| GMPIBKBJ_00023 | 1.2e-64 | silP | 1.9.3.1, 3.6.3.54 | S | Cupredoxin-like domain | |
| GMPIBKBJ_00024 | 3.5e-76 | atkY | K | Penicillinase repressor | ||
| GMPIBKBJ_00025 | 2.3e-35 | |||||
| GMPIBKBJ_00026 | 1.8e-224 | pbuG | S | permease | ||
| GMPIBKBJ_00027 | 7.1e-50 | S | Uncharacterised protein family (UPF0236) | |||
| GMPIBKBJ_00028 | 2.3e-240 | amtB | P | ammonium transporter | ||
| GMPIBKBJ_00029 | 4.4e-43 | S | Uncharacterised protein family (UPF0236) | |||
| GMPIBKBJ_00030 | 1.9e-68 | S | Uncharacterised protein family (UPF0236) | |||
| GMPIBKBJ_00031 | 5.9e-48 | S | Uncharacterised protein family (UPF0236) | |||
| GMPIBKBJ_00032 | 3.2e-74 | S | SLAP domain | |||
| GMPIBKBJ_00033 | 5.5e-92 | S | SLAP domain | |||
| GMPIBKBJ_00034 | 4.2e-208 | glmU | 2.3.1.157, 2.7.7.23 | M | Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain | |
| GMPIBKBJ_00035 | 2.4e-150 | purR | 2.4.2.22, 2.4.2.7 | F | pur operon repressor | |
| GMPIBKBJ_00036 | 1e-38 | veg | S | Biofilm formation stimulator VEG | ||
| GMPIBKBJ_00037 | 5.5e-161 | ksgA | 2.1.1.182 | J | Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | |
| GMPIBKBJ_00038 | 5e-99 | rnmV | 3.1.26.8 | J | Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step | |
| GMPIBKBJ_00039 | 4.6e-148 | tatD | L | hydrolase, TatD family | ||
| GMPIBKBJ_00040 | 0.0 | metG | 6.1.1.10 | J | Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation | |
| GMPIBKBJ_00041 | 0.0 | mgtA | 3.6.3.2 | P | COG0474 Cation transport ATPase | |
| GMPIBKBJ_00042 | 3.9e-108 | S | TPM domain | |||
| GMPIBKBJ_00043 | 1.5e-91 | comEB | 3.5.4.12 | F | MafB19-like deaminase | |
| GMPIBKBJ_00044 | 2.8e-193 | trpS | 6.1.1.2 | J | Belongs to the class-I aminoacyl-tRNA synthetase family | |
| GMPIBKBJ_00045 | 5.3e-115 | E | Belongs to the SOS response-associated peptidase family | |||
| GMPIBKBJ_00047 | 6.4e-114 | |||||
| GMPIBKBJ_00048 | 1.9e-77 | greA | K | Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides | ||
| GMPIBKBJ_00049 | 4.7e-60 | hsp | O | Belongs to the small heat shock protein (HSP20) family | ||
| GMPIBKBJ_00050 | 6.2e-43 | hepT | 2.5.1.30, 2.5.1.90 | H | Belongs to the FPP GGPP synthase family | |
| GMPIBKBJ_00051 | 3.5e-120 | 3.6.1.27 | I | Acid phosphatase homologues | ||
| GMPIBKBJ_00052 | 0.0 | leuS | 6.1.1.4 | J | Belongs to the class-I aminoacyl-tRNA synthetase family | |
| GMPIBKBJ_00053 | 5.8e-297 | ytgP | S | Polysaccharide biosynthesis protein | ||
| GMPIBKBJ_00054 | 3.8e-40 | L | transposase, IS605 OrfB family | |||
| GMPIBKBJ_00055 | 0.0 | valS | 6.1.1.9 | J | amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner | |
| GMPIBKBJ_00056 | 2.9e-240 | folC | 6.3.2.12, 6.3.2.17 | H | Belongs to the folylpolyglutamate synthase family | |
| GMPIBKBJ_00057 | 1e-127 | S | Haloacid dehalogenase-like hydrolase | |||
| GMPIBKBJ_00058 | 2.1e-114 | radC | L | DNA repair protein | ||
| GMPIBKBJ_00059 | 1.7e-174 | mreB | D | cell shape determining protein MreB | ||
| GMPIBKBJ_00060 | 7.9e-149 | mreC | M | Involved in formation and maintenance of cell shape | ||
| GMPIBKBJ_00061 | 4.5e-97 | mreD | ||||
| GMPIBKBJ_00062 | 6.5e-13 | S | Protein of unknown function (DUF4044) | |||
| GMPIBKBJ_00063 | 2.2e-54 | S | Protein of unknown function (DUF3397) | |||
| GMPIBKBJ_00064 | 2.8e-105 | lepB | 3.4.21.89 | U | Peptidase S24-like | |
| GMPIBKBJ_00065 | 7.8e-140 | |||||
| GMPIBKBJ_00066 | 4.1e-181 | |||||
| GMPIBKBJ_00067 | 4.3e-261 | rsmF | 2.1.1.176 | J | NOL1 NOP2 sun family protein | |
| GMPIBKBJ_00068 | 6.7e-187 | fni | 1.1.1.88, 5.3.3.2 | C | Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) | |
| GMPIBKBJ_00069 | 1e-201 | mvaK2 | 2.7.1.36, 2.7.1.43, 2.7.4.2 | I | phosphomevalonate kinase | |
| GMPIBKBJ_00070 | 7.5e-180 | mvaD | 4.1.1.33 | I | diphosphomevalonate decarboxylase | |
| GMPIBKBJ_00071 | 9.6e-169 | mvk | 1.1.1.88, 2.3.3.10, 2.7.1.36 | I | GHMP kinases N terminal domain | |
| GMPIBKBJ_00072 | 0.0 | rexB | 3.1.21.3, 3.6.4.12 | L | The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity | |
| GMPIBKBJ_00073 | 0.0 | addA | 3.6.4.12 | L | ATP-dependent helicase nuclease subunit A | |
| GMPIBKBJ_00074 | 0.0 | dinG | 2.7.7.7, 3.6.4.12 | L | helicase involved in DNA repair and perhaps also replication | |
| GMPIBKBJ_00075 | 2.9e-90 | ypmB | S | Protein conserved in bacteria | ||
| GMPIBKBJ_00076 | 4.4e-260 | asnS | 6.1.1.22 | J | Asparaginyl-tRNA synthetase | |
| GMPIBKBJ_00077 | 7.4e-115 | dnaD | L | DnaD domain protein | ||
| GMPIBKBJ_00078 | 4.3e-112 | nth | 4.2.99.18 | L | DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate | |
| GMPIBKBJ_00079 | 0.0 | ponA | 2.4.1.129, 3.4.16.4 | GT51 | M | penicillin-binding protein 1A |
| GMPIBKBJ_00080 | 1.2e-117 | recU | L | Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation | ||
| GMPIBKBJ_00081 | 1.7e-107 | ypsA | S | Belongs to the UPF0398 family | ||
| GMPIBKBJ_00082 | 1.4e-69 | gpsB | D | Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation | ||
| GMPIBKBJ_00083 | 1e-220 | rlmL | 2.1.1.173, 2.1.1.264 | L | Belongs to the methyltransferase superfamily | |
| GMPIBKBJ_00084 | 6.5e-11 | cpdA | S | Calcineurin-like phosphoesterase | ||
| GMPIBKBJ_00085 | 1.3e-86 | cpdA | S | Calcineurin-like phosphoesterase | ||
| GMPIBKBJ_00086 | 1.6e-80 | cpdA | S | Calcineurin-like phosphoesterase | ||
| GMPIBKBJ_00087 | 7e-33 | |||||
| GMPIBKBJ_00088 | 0.0 | fhs | 6.3.4.3 | F | Belongs to the formate--tetrahydrofolate ligase family | |
| GMPIBKBJ_00089 | 2.1e-79 | lspA | 3.4.23.36 | MU | This protein specifically catalyzes the removal of signal peptides from prolipoproteins | |
| GMPIBKBJ_00090 | 1.6e-168 | rluD | 5.4.99.23 | J | Responsible for synthesis of pseudouridine from uracil | |
| GMPIBKBJ_00091 | 3e-198 | carA | 6.3.5.5 | F | Carbamoyl-phosphate synthetase glutamine chain | |
| GMPIBKBJ_00092 | 0.0 | carB1 | 6.3.5.5 | F | Carbamoyl-phosphate synthase | |
| GMPIBKBJ_00093 | 0.0 | FbpA | K | Fibronectin-binding protein | ||
| GMPIBKBJ_00094 | 7.7e-65 | |||||
| GMPIBKBJ_00095 | 3.5e-160 | degV | S | EDD domain protein, DegV family | ||
| GMPIBKBJ_00096 | 1.3e-204 | xerS | L | Belongs to the 'phage' integrase family | ||
| GMPIBKBJ_00097 | 1.8e-67 | |||||
| GMPIBKBJ_00098 | 1.3e-78 | adk | 2.7.4.3 | F | topology modulation protein | |
| GMPIBKBJ_00099 | 1.2e-109 | XK27_00160 | S | Domain of unknown function (DUF5052) | ||
| GMPIBKBJ_00100 | 1.4e-54 | |||||
| GMPIBKBJ_00101 | 8.2e-28 | M | Glycosyl hydrolases family 25 |
Showing 1 to 100 of 1,977 entries
eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)