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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	Description
CJAHOPNC_00001	0.0	rpoC	2.7.7.6		K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CJAHOPNC_00002	0.0	rpoB	2.7.7.6		K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CJAHOPNC_00003	0.0	clpC			O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CJAHOPNC_00004	2.9e-81	yebR	1.8.4.14		T	GAF domain-containing protein
CJAHOPNC_00006	1.6e-08
CJAHOPNC_00007	5.6e-302	lysS	6.1.1.6		J	Belongs to the class-II aminoacyl-tRNA synthetase family
CJAHOPNC_00008	2.1e-196	dus			J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CJAHOPNC_00009	3.1e-164	hslO			O	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CJAHOPNC_00010	0.0	ftsH			O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CJAHOPNC_00011	4e-242	tilS	2.4.2.8, 6.3.4.19		J	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CJAHOPNC_00012	2e-61	yabR			J	S1 RNA binding domain
CJAHOPNC_00013	3.4e-59	divIC			D	Septum formation initiator
CJAHOPNC_00014	1.8e-34	yabO			J	S4 domain protein
CJAHOPNC_00015	0.0	mfd			L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CJAHOPNC_00016	1.7e-104	pth	3.1.1.29		J	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CJAHOPNC_00017	3.3e-183	ldh	1.1.1.27		C	Belongs to the LDH MDH superfamily. LDH family
CJAHOPNC_00018	1.7e-128				S	(CBS) domain
CJAHOPNC_00019	2.8e-91				K	transcriptional regulator
CJAHOPNC_00020	5.3e-217	alr	5.1.1.1		E	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CJAHOPNC_00021	1.7e-60	acpS	2.7.6.3, 2.7.8.7, 5.1.1.1		I	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CJAHOPNC_00022	5.7e-251	cshA	3.6.4.13		F	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CJAHOPNC_00023	5.3e-264	murF	6.3.2.10, 6.3.2.13		M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CJAHOPNC_00024	1.9e-39	rpmE2			J	Ribosomal protein L31
CJAHOPNC_00025	7.7e-157				S	Sucrose-6F-phosphate phosphohydrolase
CJAHOPNC_00026	5.9e-41				L	transposase, IS605 OrfB family
CJAHOPNC_00027	6.9e-22	ybbH_2			K	rpiR family
CJAHOPNC_00028	1.4e-133	nagB	3.1.1.31, 3.5.99.6		G	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CJAHOPNC_00029	9.8e-160	yeaE			S	Aldo/keto reductase family
CJAHOPNC_00030	4.3e-96				S	ECF transporter, substrate-specific component
CJAHOPNC_00031	0.0	macB_3			V	ABC transporter, ATP-binding protein
CJAHOPNC_00032	1.2e-12	macB_3			V	ABC transporter, ATP-binding protein
CJAHOPNC_00033	8.6e-196				S	DUF218 domain
CJAHOPNC_00034	4.6e-120				S	CAAX protease self-immunity
CJAHOPNC_00035	2.4e-46
CJAHOPNC_00036	5.9e-160	mutR			K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00037	2.6e-80				S	Putative adhesin
CJAHOPNC_00038	6.5e-282				V	ABC transporter transmembrane region
CJAHOPNC_00039	1.6e-47				S	YoeB-like toxin of bacterial type II toxin-antitoxin system
CJAHOPNC_00040	1.5e-49	yefM	2.3.1.15		D	Antitoxin component of a toxin-antitoxin (TA) module
CJAHOPNC_00041	5.9e-203	napA			P	Sodium/hydrogen exchanger family
CJAHOPNC_00042	0.0	cadA			P	P-type ATPase
CJAHOPNC_00043	1.9e-258	pepC	3.4.22.40		E	Peptidase C1-like family
CJAHOPNC_00044	3e-44
CJAHOPNC_00045	1.4e-42
CJAHOPNC_00046	7.2e-67	fhaB			M	Rib/alpha-like repeat
CJAHOPNC_00047	3.4e-169	ldh	1.1.1.27		C	Belongs to the LDH MDH superfamily. LDH family
CJAHOPNC_00048	2.6e-78				UW	LPXTG-motif cell wall anchor domain protein
CJAHOPNC_00049	2.2e-56				UW	LPXTG-motif cell wall anchor domain protein
CJAHOPNC_00050	5.9e-29	yitS			S	Uncharacterised protein, DegV family COG1307
CJAHOPNC_00051	1.1e-92	yitS			S	Uncharacterised protein, DegV family COG1307
CJAHOPNC_00052	4.7e-246	eno	4.2.1.11		G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CJAHOPNC_00053	7.5e-69				S	Domain of unknown function (DUF4767)
CJAHOPNC_00054	1.2e-85				C	nitroreductase
CJAHOPNC_00055	7.7e-11	ypbG	2.7.1.2		GK	ROK family
CJAHOPNC_00056	7.7e-80	ypbG	2.7.1.2		GK	ROK family
CJAHOPNC_00057	9.7e-282	pbg6	3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
CJAHOPNC_00058	1.1e-135	pts23C			G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CJAHOPNC_00059	1.2e-137	yjjG	3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2		S	Haloacid dehalogenase-like hydrolase
CJAHOPNC_00060	1.5e-178	ABC-SBP			S	ABC transporter
CJAHOPNC_00061	1.7e-122	XK27_08840			U	Belongs to the binding-protein-dependent transport system permease family
CJAHOPNC_00062	9.6e-138	XK27_08845			S	ABC transporter, ATP-binding protein
CJAHOPNC_00063	4.1e-41
CJAHOPNC_00064	4.8e-11
CJAHOPNC_00065	6.2e-105		3.1.1.5		E	GDSL-like Lipase/Acylhydrolase
CJAHOPNC_00066	2.2e-177				K	AI-2E family transporter
CJAHOPNC_00067	0.0	rtpR	1.1.98.6, 1.17.4.1, 1.17.4.2		F	ribonucleoside-triphosphate reductase activity
CJAHOPNC_00068	2.1e-67				S	Domain of unknown function (DUF4430)
CJAHOPNC_00069	1.4e-87				S	ECF transporter, substrate-specific component
CJAHOPNC_00070	1.3e-99	yvqK	1.2.1.88, 1.5.5.2, 2.5.1.17		S	cob(I)alamin adenosyltransferase
CJAHOPNC_00071	1.6e-148				S	Putative ABC-transporter type IV
CJAHOPNC_00072	8.1e-236				S	LPXTG cell wall anchor motif
CJAHOPNC_00073	4.2e-35	pipD			E	Dipeptidase
CJAHOPNC_00074	2.2e-174				S	cog cog1373
CJAHOPNC_00075	1.3e-52	pbuG			S	permease
CJAHOPNC_00076	1.3e-157	pbuG			S	permease
CJAHOPNC_00077	1.3e-145	cof			S	haloacid dehalogenase-like hydrolase
CJAHOPNC_00078	1.4e-127	dgk	2.7.1.74, 2.7.1.76		F	deoxynucleoside kinase
CJAHOPNC_00079	7.2e-118	dak	2.7.1.74, 2.7.1.76		F	deoxynucleoside kinase
CJAHOPNC_00081	1.2e-18	ybbH_2			K	rpiR family
CJAHOPNC_00082	4.5e-50
CJAHOPNC_00083	7.4e-68
CJAHOPNC_00084	2.1e-35				L	transposase, IS605 OrfB family
CJAHOPNC_00085	3.2e-10				S	cog cog1373
CJAHOPNC_00086	1.7e-111				K	helix_turn_helix, mercury resistance
CJAHOPNC_00087	1.2e-231	pbuG			S	permease
CJAHOPNC_00088	0.0	aha1			P	E1-E2 ATPase
CJAHOPNC_00089	0.0	prtS	3.4.21.110, 3.4.21.96		O	Belongs to the peptidase S8 family
CJAHOPNC_00090	3.2e-16	prtS	3.4.21.110, 3.4.21.96		O	Belongs to the peptidase S8 family
CJAHOPNC_00091	8.6e-136	tagA	2.4.1.187	GT26	F	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CJAHOPNC_00092	8.3e-207	csaB			M	Glycosyl transferases group 1
CJAHOPNC_00093	7.7e-285	pncB	6.3.4.21		F	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CJAHOPNC_00094	2.1e-154	nadE	6.3.1.5		F	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CJAHOPNC_00095	3.1e-218				L	Probable transposase
CJAHOPNC_00096	1.8e-110				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00097	5.9e-76				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00098	2e-183	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00099	5.1e-12
CJAHOPNC_00100	2.6e-31
CJAHOPNC_00101	1.8e-10
CJAHOPNC_00102	1.8e-22
CJAHOPNC_00103	2.1e-20
CJAHOPNC_00106	1.3e-65
CJAHOPNC_00107	1.5e-31				K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00108	9e-17				K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00109	1.4e-144				K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00110	1e-107				S	Protein of unknown function (DUF3232)
CJAHOPNC_00111	2e-55				S	SLAP domain
CJAHOPNC_00112	1.5e-36
CJAHOPNC_00113	6e-25				K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00114	2.6e-77	smpB			J	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CJAHOPNC_00115	0.0	rnr			J	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CJAHOPNC_00116	2.3e-29	secG			U	Preprotein translocase
CJAHOPNC_00117	0.0	ltaS	2.7.8.20		M	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CJAHOPNC_00118	3.3e-178	mprF			S	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CJAHOPNC_00119	4e-203	cpoA		GT4	M	Glycosyltransferase, group 1 family protein
CJAHOPNC_00120	4.8e-221	mgs	2.4.1.337	GT4	M	Glycosyl transferase 4-like domain
CJAHOPNC_00132	5e-62				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00133	1.4e-09				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00150	8.9e-156	ropB			K	Transcriptional regulator
CJAHOPNC_00151	2.7e-161	XK27_02480			EGP	Major facilitator Superfamily
CJAHOPNC_00152	1.4e-184				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_00153	1.7e-82	rdgB	3.6.1.66, 5.1.1.3		F	Ham1 family
CJAHOPNC_00155	0.0	uvrA3			L	excinuclease ABC, A subunit
CJAHOPNC_00156	9.8e-94	yyaR			K	Acetyltransferase (GNAT) domain
CJAHOPNC_00157	1e-116	mta			K	helix_turn_helix, mercury resistance
CJAHOPNC_00158	5.3e-07				S	ParE toxin of type II toxin-antitoxin system, parDE
CJAHOPNC_00159	9e-311	ybiT			S	ABC transporter, ATP-binding protein
CJAHOPNC_00160	7.8e-210	pepA			E	M42 glutamyl aminopeptidase
CJAHOPNC_00161	2.2e-120	mdtG			EGP	Major facilitator Superfamily
CJAHOPNC_00162	3.2e-141				L	Transposase
CJAHOPNC_00163	1.2e-94				S	hydrolase
CJAHOPNC_00164	1.2e-138				S	CAAX amino terminal protease
CJAHOPNC_00165	1.5e-75				S	CAAX protease self-immunity
CJAHOPNC_00166	4.6e-76				S	CAAX protease self-immunity
CJAHOPNC_00167	1.1e-16				K	LytTr DNA-binding domain
CJAHOPNC_00168	5.5e-76				K	LytTr DNA-binding domain
CJAHOPNC_00169	7.9e-29		2.7.13.3		T	GHKL domain
CJAHOPNC_00170	1.5e-53		2.7.13.3		T	GHKL domain
CJAHOPNC_00171	1.1e-161	rssA			S	Phospholipase, patatin family
CJAHOPNC_00172	0.0	xfp	4.1.2.22, 4.1.2.9		G	Phosphoketolase
CJAHOPNC_00173	4.3e-68	glcR			K	DeoR C terminal sensor domain
CJAHOPNC_00174	1.8e-28	glcR			K	DeoR C terminal sensor domain
CJAHOPNC_00175	1.3e-63				S	Enterocin A Immunity
CJAHOPNC_00176	2.5e-55	yitW			S	Iron-sulfur cluster assembly protein
CJAHOPNC_00177	1.6e-271	sufB			O	assembly protein SufB
CJAHOPNC_00178	3.8e-81	nifU			C	SUF system FeS assembly protein, NifU family
CJAHOPNC_00179	1.2e-235	sufS	2.8.1.7, 4.4.1.16		E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CJAHOPNC_00180	1.8e-229	sufD			O	FeS assembly protein SufD
CJAHOPNC_00181	3.4e-146	sufC			O	FeS assembly ATPase SufC
CJAHOPNC_00182	3.4e-23				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_00183	2.7e-51				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_00184	5.4e-155				S	hydrolase
CJAHOPNC_00185	4.8e-38	aacC	2.3.1.81		V	Aminoglycoside 3-N-acetyltransferase
CJAHOPNC_00186	5.7e-88	luxS	4.4.1.21		H	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CJAHOPNC_00187	0.0	metE	2.1.1.14		E	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CJAHOPNC_00188	2.4e-124	metF	1.5.1.20		C	Methylenetetrahydrofolate reductase
CJAHOPNC_00189	8.1e-108				L	Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00190	2.8e-183				P	secondary active sulfate transmembrane transporter activity
CJAHOPNC_00191	2.3e-96	apt	2.4.2.22, 2.4.2.7		F	Phosphoribosyl transferase domain
CJAHOPNC_00192	4e-267				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_00193	2.1e-148	ptp2	3.1.3.48		T	Tyrosine phosphatase family
CJAHOPNC_00194	1.8e-51	glpK	2.7.1.30		F	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CJAHOPNC_00195	1.8e-90	glpK	2.7.1.30		F	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CJAHOPNC_00196	9e-84	glpK	2.7.1.30		F	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CJAHOPNC_00197	1.2e-151	thiD	2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17		H	Phosphomethylpyrimidine kinase
CJAHOPNC_00199	1.9e-132	cobQ			S	glutamine amidotransferase
CJAHOPNC_00200	2.5e-56	patA	2.6.1.1		E	Aminotransferase
CJAHOPNC_00201	4.2e-158	patA	2.6.1.1		E	Aminotransferase
CJAHOPNC_00202	2.9e-251	serS	6.1.1.11		J	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CJAHOPNC_00203	2.7e-97				J	Acetyltransferase (GNAT) domain
CJAHOPNC_00204	2e-109	yjbF			S	SNARE associated Golgi protein
CJAHOPNC_00205	2.6e-154				I	alpha/beta hydrolase fold
CJAHOPNC_00206	2.8e-40	hipB			K	Helix-turn-helix
CJAHOPNC_00207	2e-123
CJAHOPNC_00208	1.2e-128	yfeJ	6.3.5.2		F	glutamine amidotransferase
CJAHOPNC_00209	2.6e-149	glnH			ET	ABC transporter
CJAHOPNC_00210	5.1e-81				K	Transcriptional regulator, MarR family
CJAHOPNC_00211	1.3e-294	XK27_09600			V	ABC transporter, ATP-binding protein
CJAHOPNC_00212	3e-182				V	ABC transporter transmembrane region
CJAHOPNC_00213	1.4e-119				V	ABC transporter transmembrane region
CJAHOPNC_00214	7.6e-103				S	ABC-type cobalt transport system, permease component
CJAHOPNC_00215	3.3e-135	glnQ	3.6.3.21		E	ABC transporter, ATP-binding protein
CJAHOPNC_00216	1.5e-152	glnH			ET	ABC transporter substrate-binding protein
CJAHOPNC_00217	5.6e-107	gluC			P	ABC transporter permease
CJAHOPNC_00218	2.8e-109	glnP			P	ABC transporter permease
CJAHOPNC_00219	5.5e-62				S	Protein of unknown function (DUF2974)
CJAHOPNC_00220	4.9e-235				L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00221	2.8e-236				G	Bacterial extracellular solute-binding protein
CJAHOPNC_00222	5.8e-247	XK27_08635			S	UPF0210 protein
CJAHOPNC_00223	3.9e-41	gcvR			T	Belongs to the UPF0237 family
CJAHOPNC_00224	1.9e-36				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_00225	6.9e-196				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_00226	1.6e-162		2.7.7.12		C	Domain of unknown function (DUF4931)
CJAHOPNC_00227	1.2e-166	rbsK	2.7.1.15		H	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJAHOPNC_00228	9e-127	rpiA	2.7.1.12, 2.7.1.15, 5.3.1.6		G	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CJAHOPNC_00229	0.0	kup			P	Transport of potassium into the cell
CJAHOPNC_00230	4.8e-176	rihB	3.2.2.1		F	Nucleoside
CJAHOPNC_00231	7.6e-21	gntR			K	UbiC transcription regulator-associated domain protein
CJAHOPNC_00232	1.5e-74	gntR			K	UbiC transcription regulator-associated domain protein
CJAHOPNC_00234	0.0	FbpA			K	Fibronectin-binding protein
CJAHOPNC_00235	0.0	carB1	6.3.5.5		F	Carbamoyl-phosphate synthase
CJAHOPNC_00236	4.3e-197	carA	6.3.5.5		F	Carbamoyl-phosphate synthetase glutamine chain
CJAHOPNC_00237	2.5e-169	rluD	5.4.99.23		J	Responsible for synthesis of pseudouridine from uracil
CJAHOPNC_00238	7.3e-80	lspA	3.4.23.36		MU	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CJAHOPNC_00239	0.0	fhs	6.3.4.3		F	Belongs to the formate--tetrahydrofolate ligase family
CJAHOPNC_00240	7e-33
CJAHOPNC_00241	1.6e-80	cpdA			S	Calcineurin-like phosphoesterase
CJAHOPNC_00242	2.6e-87	cpdA			S	Calcineurin-like phosphoesterase
CJAHOPNC_00243	6.5e-11	cpdA			S	Calcineurin-like phosphoesterase
CJAHOPNC_00244	3.9e-220	rlmL	2.1.1.173, 2.1.1.264		L	Belongs to the methyltransferase superfamily
CJAHOPNC_00245	2.7e-70	gpsB			D	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CJAHOPNC_00246	3.8e-107	ypsA			S	Belongs to the UPF0398 family
CJAHOPNC_00247	2.7e-117	recU			L	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CJAHOPNC_00248	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	penicillin-binding protein 1A
CJAHOPNC_00249	3.9e-113	nth	4.2.99.18		L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CJAHOPNC_00250	7.4e-115	dnaD			L	DnaD domain protein
CJAHOPNC_00251	1.2e-260	asnS	6.1.1.22		J	Asparaginyl-tRNA synthetase
CJAHOPNC_00252	2.9e-90	ypmB			S	Protein conserved in bacteria
CJAHOPNC_00253	0.0	dinG	2.7.7.7, 3.6.4.12		L	helicase involved in DNA repair and perhaps also replication
CJAHOPNC_00254	0.0	addA	3.6.4.12		L	ATP-dependent helicase nuclease subunit A
CJAHOPNC_00255	0.0	rexB	3.1.21.3, 3.6.4.12		L	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CJAHOPNC_00256	9.6e-169	mvk	1.1.1.88, 2.3.3.10, 2.7.1.36		I	GHMP kinases N terminal domain
CJAHOPNC_00257	7.5e-180	mvaD	4.1.1.33		I	diphosphomevalonate decarboxylase
CJAHOPNC_00258	4.2e-203	mvaK2	2.7.1.36, 2.7.1.43, 2.7.4.2		I	phosphomevalonate kinase
CJAHOPNC_00259	6.7e-187	fni	1.1.1.88, 5.3.3.2		C	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CJAHOPNC_00260	1.7e-262	rsmF	2.1.1.176		J	NOL1 NOP2 sun family protein
CJAHOPNC_00261	4.1e-181
CJAHOPNC_00262	7.8e-140
CJAHOPNC_00263	2.8e-105	lepB	3.4.21.89		U	Peptidase S24-like
CJAHOPNC_00266	0.0				S	SH3-like domain
CJAHOPNC_00267	1.6e-152				S	haloacid dehalogenase-like hydrolase
CJAHOPNC_00268	3.7e-48	ycaM			E	amino acid
CJAHOPNC_00269	3e-135	ycaM			E	amino acid
CJAHOPNC_00270	8.8e-88				L	Transposase
CJAHOPNC_00271	2.3e-43				L	Transposase
CJAHOPNC_00273	2.9e-63	cls			I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJAHOPNC_00274	1.6e-85		3.4.21.96		S	SLAP domain
CJAHOPNC_00275	0.0		3.6.3.2, 3.6.3.6		P	Cation transporter/ATPase, N-terminus
CJAHOPNC_00276	2.3e-156	lysR5			K	LysR substrate binding domain
CJAHOPNC_00277	3.2e-26	arcA	3.5.3.6		E	Arginine
CJAHOPNC_00278	7.9e-54	arcA	3.5.3.6		E	Arginine
CJAHOPNC_00279	1.7e-31	arcA	3.5.3.6		E	Arginine
CJAHOPNC_00280	3.9e-13	argF	2.1.3.3, 2.7.2.2		E	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CJAHOPNC_00281	5.7e-107	argF	2.1.3.3, 2.7.2.2		E	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CJAHOPNC_00282	5.8e-68	arcC	2.7.2.2		E	Belongs to the carbamate kinase family
CJAHOPNC_00283	2.8e-52	arcC	2.7.2.2		E	Belongs to the carbamate kinase family
CJAHOPNC_00284	8.9e-98	citX	2.4.2.52, 2.7.7.61		HI	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
CJAHOPNC_00285	2.1e-213				S	Sterol carrier protein domain
CJAHOPNC_00286	1.1e-19
CJAHOPNC_00287	5.9e-106				K	LysR substrate binding domain
CJAHOPNC_00288	2.4e-74
CJAHOPNC_00291	0.0	cas3			L	CRISPR-associated helicase cas3
CJAHOPNC_00292	4.3e-12				M	NlpC/P60 family
CJAHOPNC_00293	1.1e-22				M	NlpC/P60 family
CJAHOPNC_00294	4.7e-93				M	NlpC/P60 family
CJAHOPNC_00295	1.9e-11				G	Peptidase_C39 like family
CJAHOPNC_00296	3.7e-81				G	Peptidase_C39 like family
CJAHOPNC_00297	8.9e-26
CJAHOPNC_00299	1.1e-30
CJAHOPNC_00300	3e-237				S	Domain of unknown function (DUF3883)
CJAHOPNC_00301	4.2e-59				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00302	6.6e-62				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00303	2.8e-223				S	response to antibiotic
CJAHOPNC_00304	9.9e-49				L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00305	5.3e-80				V	ABC transporter transmembrane region
CJAHOPNC_00306	6.6e-75				K	LytTr DNA-binding domain
CJAHOPNC_00307	1.9e-74				S	Protein of unknown function (DUF3021)
CJAHOPNC_00308	2.4e-265	lsa			S	ABC transporter
CJAHOPNC_00309	3.6e-137	aroD	1.1.1.25, 4.2.1.10		E	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
CJAHOPNC_00310	1.7e-202	ydiM			G	Major Facilitator Superfamily
CJAHOPNC_00311	3.5e-157	aroE	1.1.1.25, 1.1.1.282, 1.3.5.4		E	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CJAHOPNC_00313	3.1e-55				L	Transposase
CJAHOPNC_00314	1.3e-212	lacZ	3.2.1.23		G	-beta-galactosidase
CJAHOPNC_00315	0.0	lacS			G	Transporter
CJAHOPNC_00316	4e-57	lacS			G	Transporter
CJAHOPNC_00317	5.9e-70	lacS			G	Transporter
CJAHOPNC_00318	1.2e-23				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_00319	4.1e-35	lacS			G	MFS/sugar transport protein
CJAHOPNC_00320	6e-24	lacS			G	Transporter
CJAHOPNC_00321	4.9e-190	lacR			K	Transcriptional regulator
CJAHOPNC_00322	2.4e-39
CJAHOPNC_00323	7.5e-64
CJAHOPNC_00324	1.4e-92
CJAHOPNC_00325	2.1e-216	rodA			D	Belongs to the SEDS family
CJAHOPNC_00326	8.6e-34				S	Protein of unknown function (DUF2969)
CJAHOPNC_00327	3.8e-50	yidD			S	Could be involved in insertion of integral membrane proteins into the membrane
CJAHOPNC_00328	6.5e-179	mbl			D	Cell shape determining protein MreB Mrl
CJAHOPNC_00329	3.4e-30	ywzB			S	Protein of unknown function (DUF1146)
CJAHOPNC_00330	3.3e-66	atpC			C	Produces ATP from ADP in the presence of a proton gradient across the membrane
CJAHOPNC_00331	6.3e-239	atpD	3.6.3.14		C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CJAHOPNC_00332	8.9e-173	atpG			C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CJAHOPNC_00333	2.2e-282	atpA	3.6.3.14		C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CJAHOPNC_00334	4.7e-94	atpH			C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CJAHOPNC_00335	5.2e-47	atpF			C	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CJAHOPNC_00336	8.6e-29	atpE			C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CJAHOPNC_00337	2.2e-128	atpB			C	it plays a direct role in the translocation of protons across the membrane
CJAHOPNC_00338	3e-113	upp	2.4.2.9		F	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CJAHOPNC_00339	2.9e-190	ywlC	2.7.7.87, 3.1.3.48		J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CJAHOPNC_00340	6e-157	prmB	2.1.1.297, 2.1.1.298		J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CJAHOPNC_00341	5.3e-182	prfA			J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CJAHOPNC_00342	7.6e-114	tdk	2.7.1.21		F	thymidine kinase
CJAHOPNC_00343	1.8e-248	murF	6.3.2.10, 6.3.2.13		M	Domain of unknown function (DUF1727)
CJAHOPNC_00344	6e-224	sip			L	Belongs to the 'phage' integrase family
CJAHOPNC_00345	1.3e-78				K	Transcriptional
CJAHOPNC_00346	7.6e-13				S	Helix-turn-helix domain
CJAHOPNC_00347	1.7e-29
CJAHOPNC_00348	2.9e-44
CJAHOPNC_00350	2.4e-253				S	Virulence-associated protein E
CJAHOPNC_00351	5.3e-57
CJAHOPNC_00354	1.5e-188	ampC			V	Beta-lactamase
CJAHOPNC_00355	3.5e-55
CJAHOPNC_00356	9.2e-248	nhaC			C	Na H antiporter NhaC
CJAHOPNC_00357	1.8e-256	rumA	2.1.1.190		J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CJAHOPNC_00358	1.2e-115				L	Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
CJAHOPNC_00360	5.3e-59				K	transcriptional regulator PadR family
CJAHOPNC_00361	8.9e-40				KT	PspC domain protein
CJAHOPNC_00362	2.8e-78	ydhK			M	Protein of unknown function (DUF1541)
CJAHOPNC_00363	8e-182				L	PFAM Integrase, catalytic core
CJAHOPNC_00364	7.4e-264	tnp2			L	PFAM Transposase, IS204 IS1001 IS1096 IS1165
CJAHOPNC_00365	1.9e-30	cspA			K	Cold shock protein
CJAHOPNC_00368	1.3e-13				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_00369	1.6e-42				L	Psort location Cytoplasmic, score
CJAHOPNC_00370	5.1e-135				L	Psort location Cytoplasmic, score
CJAHOPNC_00371	9e-83				FG	adenosine 5'-monophosphoramidase activity
CJAHOPNC_00372	7.2e-47
CJAHOPNC_00373	2.8e-100				L	Integrase
CJAHOPNC_00374	8e-42				S	RelB antitoxin
CJAHOPNC_00375	5.5e-21	ynbB	4.4.1.1		P	aluminum resistance
CJAHOPNC_00376	2.4e-64	ynbB	4.4.1.1		P	aluminum resistance
CJAHOPNC_00377	3.1e-264	glnA	6.3.1.2		E	glutamine synthetase
CJAHOPNC_00378	1.4e-69
CJAHOPNC_00379	2e-57
CJAHOPNC_00380	6.4e-165
CJAHOPNC_00381	3.8e-150
CJAHOPNC_00382	4.9e-58	yufP			S	Belongs to the binding-protein-dependent transport system permease family
CJAHOPNC_00383	1.4e-26	yufQ			S	Belongs to the binding-protein-dependent transport system permease family
CJAHOPNC_00384	1.2e-112	yufQ			S	Belongs to the binding-protein-dependent transport system permease family
CJAHOPNC_00385	0.0		3.6.3.8		P	P-type ATPase
CJAHOPNC_00386	3.4e-57				S	reductase
CJAHOPNC_00387	1.1e-47				S	reductase
CJAHOPNC_00388	2.6e-225	pyrP			F	Permease
CJAHOPNC_00389	1.4e-90	pyrR	2.4.2.9		F	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CJAHOPNC_00391	4.5e-261	emrY			EGP	Major facilitator Superfamily
CJAHOPNC_00392	4e-78	mdtG			EGP	Major facilitator Superfamily
CJAHOPNC_00393	1.3e-221				L	Transposase
CJAHOPNC_00394	6.1e-34	ugpQ	3.1.4.46		C	glycerophosphoryl diester phosphodiesterase
CJAHOPNC_00395	6.4e-182	ccpA			K	catabolite control protein A
CJAHOPNC_00396	5.7e-216	pepQ	3.4.13.9		E	Creatinase/Prolidase N-terminal domain
CJAHOPNC_00397	2.2e-137				L	DDE superfamily endonuclease
CJAHOPNC_00398	2.4e-26
CJAHOPNC_00399	2.5e-40	ptsH			G	phosphocarrier protein HPR
CJAHOPNC_00400	2.7e-305	ptsI	2.7.3.9		G	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CJAHOPNC_00401	1e-66	spxA	1.20.4.1		K	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CJAHOPNC_00402	2.3e-136	mecA			NOT	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CJAHOPNC_00403	4e-116	coiA	3.6.4.12		S	Competence protein
CJAHOPNC_00407	7.9e-188		2.7.7.73, 2.7.7.80		H	Involved in molybdopterin and thiamine biosynthesis, family 2
CJAHOPNC_00409	3.5e-43	oppA			E	ABC transporter
CJAHOPNC_00410	4.3e-63	oppA			E	ABC transporter
CJAHOPNC_00411	1.7e-96				Q	Imidazolonepropionase and related amidohydrolases
CJAHOPNC_00412	1.5e-74				Q	Imidazolonepropionase and related amidohydrolases
CJAHOPNC_00413	3.7e-18	psiE			S	Phosphate-starvation-inducible E
CJAHOPNC_00415	1.9e-222	galK	2.7.1.6		F	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CJAHOPNC_00416	1.8e-289	galT	2.7.7.12		G	UDP-glucose--hexose-1-phosphate uridylyltransferase
CJAHOPNC_00417	1e-195	galM	5.1.3.3		G	Catalyzes the interconversion of alpha and beta anomers of maltose
CJAHOPNC_00418	2.7e-77				S	SLAP domain
CJAHOPNC_00419	9e-115				S	SLAP domain
CJAHOPNC_00420	3.6e-25				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_00421	3.2e-46				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_00422	1.8e-35				K	response regulator
CJAHOPNC_00423	3.1e-30	sptS	2.7.13.3		T	Histidine kinase
CJAHOPNC_00424	3.2e-117	sptS	2.7.13.3		T	Histidine kinase
CJAHOPNC_00425	5.5e-209				EGP	Major facilitator Superfamily
CJAHOPNC_00426	2.4e-71				O	OsmC-like protein
CJAHOPNC_00427	4.9e-128	dkgA	1.1.1.346		S	L-ascorbic acid biosynthetic process
CJAHOPNC_00428	4.9e-257				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_00429	2.1e-21
CJAHOPNC_00430	6.4e-24
CJAHOPNC_00431	2.3e-52				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_00432	3.1e-47				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_00433	6.3e-08				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_00434	1.9e-45				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_00437	1.6e-63				K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00439	4.4e-20
CJAHOPNC_00440	4e-107				L	Integrase
CJAHOPNC_00441	3.1e-41				S	RelB antitoxin
CJAHOPNC_00442	1.6e-51				S	Bacterial toxin of type II toxin-antitoxin system, YafQ
CJAHOPNC_00443	1.5e-67	tnp2PF3			L	Transposase
CJAHOPNC_00444	2.9e-33	tnp2PF3			L	Putative transposase of IS4/5 family (DUF4096)
CJAHOPNC_00446	5.1e-68				L	Putative transposase of IS4/5 family (DUF4096)
CJAHOPNC_00447	2.2e-75				L	Transposase DDE domain
CJAHOPNC_00449	3.9e-151
CJAHOPNC_00450	1.2e-17
CJAHOPNC_00451	1.9e-16	glpQ	3.1.4.46		C	Membrane domain of glycerophosphoryl diester phosphodiesterase
CJAHOPNC_00452	5.9e-70				S	Iron-sulphur cluster biosynthesis
CJAHOPNC_00453	2.3e-193	ybiR			P	Citrate transporter
CJAHOPNC_00454	2.3e-96	lemA			S	LemA family
CJAHOPNC_00455	3.9e-162	htpX			O	Belongs to the peptidase M48B family
CJAHOPNC_00456	1.3e-66				L	Helix-turn-helix domain
CJAHOPNC_00457	5.6e-08				L	hmm pf00665
CJAHOPNC_00458	1.9e-59				L	hmm pf00665
CJAHOPNC_00459	5.1e-173				K	helix_turn_helix, arabinose operon control protein
CJAHOPNC_00460	1e-60				L	Transposase
CJAHOPNC_00461	6.7e-23
CJAHOPNC_00462	9.9e-55		3.1.4.46		C	Glycerophosphoryl diester phosphodiesterase family
CJAHOPNC_00463	2.1e-137		3.1.4.46		C	Glycerophosphoryl diester phosphodiesterase family
CJAHOPNC_00464	1.2e-65		2.4.1.83	GT2	S	GtrA-like protein
CJAHOPNC_00465	9.5e-172	yfdH		GT2	M	Glycosyltransferase like family 2
CJAHOPNC_00466	4.5e-244				L	transposase, IS605 OrfB family
CJAHOPNC_00467	2.4e-36
CJAHOPNC_00468	1.2e-20				L	transposase, IS605 OrfB family
CJAHOPNC_00469	2.1e-59				L	transposase, IS605 OrfB family
CJAHOPNC_00470	3.8e-40				L	transposase, IS605 OrfB family
CJAHOPNC_00471	0.0	valS	6.1.1.9		J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CJAHOPNC_00472	2.9e-240	folC	6.3.2.12, 6.3.2.17		H	Belongs to the folylpolyglutamate synthase family
CJAHOPNC_00473	1e-127				S	Haloacid dehalogenase-like hydrolase
CJAHOPNC_00474	2.1e-114	radC			L	DNA repair protein
CJAHOPNC_00475	3.2e-173	mreB			D	cell shape determining protein MreB
CJAHOPNC_00476	7.9e-149	mreC			M	Involved in formation and maintenance of cell shape
CJAHOPNC_00477	4.5e-97	mreD
CJAHOPNC_00478	6.5e-13				S	Protein of unknown function (DUF4044)
CJAHOPNC_00479	2.2e-54				S	Protein of unknown function (DUF3397)
CJAHOPNC_00480	4.3e-26				S	ABC transporter
CJAHOPNC_00481	3.7e-108				S	ABC-2 family transporter protein
CJAHOPNC_00482	9.7e-141				S	ABC-2 family transporter protein
CJAHOPNC_00484	2.5e-13				KLT	Protein kinase domain
CJAHOPNC_00485	1.2e-27				KLT	Protein kinase domain
CJAHOPNC_00487	3.5e-36				S	Transglycosylase associated protein
CJAHOPNC_00488	1.6e-19	lysA2			M	Glycosyl hydrolases family 25
CJAHOPNC_00489	3.6e-46				M	Glycosyl hydrolases family 25
CJAHOPNC_00490	1.7e-33				M	Glycosyl hydrolases family 25
CJAHOPNC_00491	8.2e-28				M	Glycosyl hydrolases family 25
CJAHOPNC_00492	1.4e-54
CJAHOPNC_00493	1.2e-109	XK27_00160			S	Domain of unknown function (DUF5052)
CJAHOPNC_00494	1.3e-78	adk	2.7.4.3		F	topology modulation protein
CJAHOPNC_00495	1.8e-67
CJAHOPNC_00496	1.1e-203	xerS			L	Belongs to the 'phage' integrase family
CJAHOPNC_00497	0.0	aspS	6.1.1.12		J	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CJAHOPNC_00498	5.2e-245	hisS	6.1.1.21		J	histidyl-tRNA synthetase
CJAHOPNC_00499	3.9e-75	dtd			J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CJAHOPNC_00500	0.0	relA	2.7.6.5		KT	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CJAHOPNC_00501	2.4e-59
CJAHOPNC_00502	7.2e-175	prmA			J	Ribosomal protein L11 methyltransferase
CJAHOPNC_00503	4.8e-217				L	transposase, IS605 OrfB family
CJAHOPNC_00504	3.2e-217	atoB	1.1.1.88, 2.3.1.9		I	Belongs to the thiolase family
CJAHOPNC_00505	1.3e-218	mvaA	1.1.1.34, 1.1.1.88, 2.3.1.9		C	Belongs to the HMG-CoA reductase family
CJAHOPNC_00506	3.2e-217	mvaS	2.3.3.10		I	Hydroxymethylglutaryl-CoA synthase
CJAHOPNC_00507	6.5e-47
CJAHOPNC_00508	4.3e-16				D	Alpha beta
CJAHOPNC_00509	3.4e-23				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_00511	3.6e-134	yvdE			K	helix_turn _helix lactose operon repressor
CJAHOPNC_00512	5.9e-42				L	Helix-turn-helix domain
CJAHOPNC_00513	2.4e-223	oxlT			P	Major Facilitator Superfamily
CJAHOPNC_00515	2.5e-68				K	Acetyltransferase (GNAT) domain
CJAHOPNC_00516	1.2e-70				L	Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00517	1.8e-32				M	NlpC/P60 family
CJAHOPNC_00518	1.3e-89		2.7.7.65		T	phosphorelay sensor kinase activity
CJAHOPNC_00519	8.8e-134	cbiQ			P	Cobalt transport protein
CJAHOPNC_00520	7e-158				P	ABC transporter
CJAHOPNC_00521	1.2e-151	cbiO2			P	ABC transporter
CJAHOPNC_00522	4.1e-47				L	Psort location Cytoplasmic, score
CJAHOPNC_00523	6.7e-259	ykgC	1.16.1.1, 1.8.1.7		C	Pyridine nucleotide-disulfide oxidoreductase
CJAHOPNC_00524	1.6e-108	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00525	2.2e-85	prtS	3.4.21.110, 3.4.21.96		O	Belongs to the peptidase S8 family
CJAHOPNC_00526	3.5e-160				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_00528	1.8e-75				L	Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
CJAHOPNC_00529	4.7e-114				L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00530	9.1e-96				L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00534	3.2e-118				L	PFAM RNA-directed DNA polymerase (Reverse transcriptase)
CJAHOPNC_00535	3.6e-288				V	ABC transporter transmembrane region
CJAHOPNC_00537	5.1e-44
CJAHOPNC_00538	3.3e-10	WQ51_05790			S	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CJAHOPNC_00539	4.1e-153	ykuT			M	mechanosensitive ion channel
CJAHOPNC_00540	5.7e-74	gmuR			K	UTRA
CJAHOPNC_00541	2.3e-59	pts23C			G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CJAHOPNC_00542	5.6e-83	racA			K	Domain of unknown function (DUF1836)
CJAHOPNC_00543	1.2e-154	yitS			S	EDD domain protein, DegV family
CJAHOPNC_00547	3.1e-150	citG	2.4.2.52, 2.7.7.61		H	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
CJAHOPNC_00548	9.8e-55
CJAHOPNC_00549	2.3e-139	glpF			U	Belongs to the MIP aquaporin (TC 1.A.8) family
CJAHOPNC_00550	6.9e-136	mgtC			S	MgtC family
CJAHOPNC_00551	1.9e-09		5.3.3.2		C	FMN-dependent dehydrogenase
CJAHOPNC_00552	1.4e-21	bglH	3.2.1.86	GT1	G	beta-glucosidase activity
CJAHOPNC_00553	9.8e-18	celA	3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
CJAHOPNC_00554	4e-181	celA	3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
CJAHOPNC_00555	1.8e-59	celA	3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
CJAHOPNC_00556	4.1e-118				K	UTRA domain
CJAHOPNC_00558	1.9e-96	glcD2	1.1.3.15		C	FAD linked oxidases, C-terminal domain
CJAHOPNC_00559	4.4e-98	glcD2	1.1.3.15		C	FAD linked oxidases, C-terminal domain
CJAHOPNC_00560	7.5e-108	pncA			Q	Isochorismatase family
CJAHOPNC_00561	1.2e-271	pncB	6.3.4.21		F	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CJAHOPNC_00562	1.5e-123	yvpB			S	Peptidase_C39 like family
CJAHOPNC_00563	1.5e-83				S	Threonine/Serine exporter, ThrE
CJAHOPNC_00564	1.8e-139	thrE			S	Putative threonine/serine exporter
CJAHOPNC_00565	2.7e-288				S	ABC transporter
CJAHOPNC_00566	5e-55
CJAHOPNC_00567	2.1e-97	rimL			J	Acetyltransferase (GNAT) domain
CJAHOPNC_00568	7.9e-29				S	Protein of unknown function (DUF554)
CJAHOPNC_00569	1.1e-38				L	COG3547 Transposase and inactivated derivatives
CJAHOPNC_00570	6.5e-72				L	COG3547 Transposase and inactivated derivatives
CJAHOPNC_00571	2.1e-206				G	Major Facilitator Superfamily
CJAHOPNC_00572	9.7e-32				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_00573	4.6e-45	yefM	2.3.1.15		D	Antitoxin component of a toxin-antitoxin (TA) module
CJAHOPNC_00574	1.6e-60	yafQ			S	Bacterial toxin of type II toxin-antitoxin system, YafQ
CJAHOPNC_00575	1.4e-127		3.6.1.13, 3.6.1.55		F	NUDIX domain
CJAHOPNC_00576	7.9e-50				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_00577	9.1e-122		3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
CJAHOPNC_00578	4.1e-49	gmuR			K	UTRA
CJAHOPNC_00579	9.4e-108	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00580	8.9e-234	glyA	2.1.2.1		E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CJAHOPNC_00581	6.2e-36	coiA	3.6.4.12		S	Competence protein
CJAHOPNC_00582	3.9e-113	yjbH			Q	Thioredoxin
CJAHOPNC_00583	2.3e-113	yjbK			S	CYTH
CJAHOPNC_00584	2.1e-114	yjbM	2.7.6.5		S	RelA SpoT domain protein
CJAHOPNC_00585	2.7e-154	nadK	2.7.1.23		F	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CJAHOPNC_00586	2.3e-170	rluD	5.4.99.23		J	Responsible for synthesis of pseudouridine from uracil
CJAHOPNC_00587	1.5e-58	mycA	4.2.1.53		S	Myosin-crossreactive antigen
CJAHOPNC_00588	3.3e-76	MA20_25245			K	Acetyltransferase (GNAT) domain
CJAHOPNC_00589	2.3e-105				L	Resolvase, N terminal domain
CJAHOPNC_00590	1.5e-255				L	Probable transposase
CJAHOPNC_00591	1.7e-18
CJAHOPNC_00593	0.0	lacL	3.2.1.23		G	Belongs to the glycosyl hydrolase 2 family
CJAHOPNC_00594	3.3e-188	lacM	3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97	GH101,GH29	G	beta-galactosidase
CJAHOPNC_00595	9.7e-191	galE	5.1.3.2		M	Belongs to the NAD(P)-dependent epimerase dehydratase family
CJAHOPNC_00596	5.9e-81				S	Short repeat of unknown function (DUF308)
CJAHOPNC_00597	4.8e-165	rapZ			S	Displays ATPase and GTPase activities
CJAHOPNC_00598	2.6e-194	ybhK			S	Required for morphogenesis under gluconeogenic growth conditions
CJAHOPNC_00599	1.4e-170	whiA			K	May be required for sporulation
CJAHOPNC_00600	2.3e-99	clpP	3.4.21.92		O	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CJAHOPNC_00601	1.5e-23				G	Glycosyl hydrolases family 8
CJAHOPNC_00602	4.4e-64				G	Glycosyl hydrolases family 8
CJAHOPNC_00603	4.7e-17				S	Peptidase propeptide and YPEB domain
CJAHOPNC_00605	2e-79	rfbD	1.1.1.133, 5.1.3.13		M	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CJAHOPNC_00606	2.6e-186				S	SLAP domain
CJAHOPNC_00607	1.7e-184				S	Bacteriocin helveticin-J
CJAHOPNC_00608	2.7e-160
CJAHOPNC_00609	2.8e-67				L	Transposase
CJAHOPNC_00610	1.2e-25				L	Transposase
CJAHOPNC_00612	1.1e-46				S	SLAP domain
CJAHOPNC_00613	1.3e-41				S	SLAP domain
CJAHOPNC_00614	3.2e-08				S	SLAP domain
CJAHOPNC_00615	2.3e-63				S	SLAP domain
CJAHOPNC_00616	7e-68				S	SLAP domain
CJAHOPNC_00617	4.2e-208	glmU	2.3.1.157, 2.7.7.23		M	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CJAHOPNC_00618	2.9e-148	purR	2.4.2.22, 2.4.2.7		F	pur operon repressor
CJAHOPNC_00619	1e-38	veg			S	Biofilm formation stimulator VEG
CJAHOPNC_00620	8.7e-159	ksgA	2.1.1.182		J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CJAHOPNC_00621	5e-99	rnmV	3.1.26.8		J	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CJAHOPNC_00622	4.6e-148	tatD			L	hydrolase, TatD family
CJAHOPNC_00623	0.0	metG	6.1.1.10		J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJAHOPNC_00624	0.0	mgtA	3.6.3.2		P	COG0474 Cation transport ATPase
CJAHOPNC_00625	3.9e-108				S	TPM domain
CJAHOPNC_00626	1.5e-91	comEB	3.5.4.12		F	MafB19-like deaminase
CJAHOPNC_00627	8.2e-193	trpS	6.1.1.2		J	Belongs to the class-I aminoacyl-tRNA synthetase family
CJAHOPNC_00628	3.5e-57				E	Belongs to the SOS response-associated peptidase family
CJAHOPNC_00629	4.6e-31				E	Belongs to the SOS response-associated peptidase family
CJAHOPNC_00631	6.4e-114
CJAHOPNC_00632	1.9e-77	greA			K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CJAHOPNC_00633	1.8e-59	hsp			O	Belongs to the small heat shock protein (HSP20) family
CJAHOPNC_00634	1.8e-256	pepC	3.4.22.40		E	aminopeptidase
CJAHOPNC_00635	3.2e-175	oppF			P	Belongs to the ABC transporter superfamily
CJAHOPNC_00636	5e-201	oppD			P	Belongs to the ABC transporter superfamily
CJAHOPNC_00637	4.9e-185	oppC			EP	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJAHOPNC_00638	1.1e-143	oppB			P	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJAHOPNC_00639	6.3e-210	guaB	1.1.1.205		F	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CJAHOPNC_00640	1.1e-297	oppA			E	ABC transporter, substratebinding protein
CJAHOPNC_00641	1.9e-300	oppA			E	ABC transporter, substratebinding protein
CJAHOPNC_00642	9.8e-123	ypgQ			S	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJAHOPNC_00643	1.6e-257	pepC	3.4.22.40		E	aminopeptidase
CJAHOPNC_00645	4.5e-53
CJAHOPNC_00646	1.8e-242	tyrS	6.1.1.1		J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CJAHOPNC_00647	1.4e-259				S	Fibronectin type III domain
CJAHOPNC_00648	1.3e-237	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00649	1.5e-112				L	Probable transposase
CJAHOPNC_00650	3.1e-228	nagA	3.5.1.25		G	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CJAHOPNC_00651	4.3e-77	XK27_08435			K	UTRA
CJAHOPNC_00652	1.1e-92	hpt	2.4.2.8		F	Belongs to the purine pyrimidine phosphoribosyltransferase family
CJAHOPNC_00654	1.9e-161	galU	2.7.7.9		M	UTP-glucose-1-phosphate uridylyltransferase
CJAHOPNC_00655	1.3e-84	yaaO	4.1.1.17, 4.1.1.19		E	Orn/Lys/Arg decarboxylase, C-terminal domain
CJAHOPNC_00656	2.7e-199	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00657	4.8e-243	purD	6.3.4.13		F	Belongs to the GARS family
CJAHOPNC_00658	0.0	purH	2.1.2.3, 3.5.4.10		F	Bifunctional purine biosynthesis protein PurH
CJAHOPNC_00659	4.9e-201	purM	6.3.3.1, 6.3.4.13		F	Phosphoribosylformylglycinamidine cyclo-ligase
CJAHOPNC_00660	2.4e-275	purF	2.4.2.14		F	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CJAHOPNC_00661	0.0	purL	6.3.5.3		F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJAHOPNC_00662	8.8e-127	purQ	6.3.5.3		F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJAHOPNC_00663	1.3e-38	purS	6.3.2.6, 6.3.5.3		F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJAHOPNC_00664	2.5e-132	purC	4.1.1.21, 4.3.2.2, 6.3.2.6		F	Belongs to the SAICAR synthetase family
CJAHOPNC_00665	3.9e-220	purK	6.3.4.18		F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CJAHOPNC_00666	1.3e-84	purE	5.4.99.18		F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CJAHOPNC_00667	1.2e-249	fhs	6.3.4.3		F	Belongs to the formate--tetrahydrofolate ligase family
CJAHOPNC_00668	9.2e-59	fhs	6.3.4.3		F	Belongs to the formate--tetrahydrofolate ligase family
CJAHOPNC_00669	2.1e-24				S	Protein of unknown function (DUF554)
CJAHOPNC_00670	2.4e-215	brpA			K	Cell envelope-like function transcriptional attenuator common domain protein
CJAHOPNC_00671	0.0	pepF			E	oligoendopeptidase F
CJAHOPNC_00672	9.1e-42	Z012_06740			S	Fic/DOC family
CJAHOPNC_00673	2.1e-42				S	Enterocin A Immunity
CJAHOPNC_00674	6.9e-163	lctP			C	L-lactate permease
CJAHOPNC_00675	5.2e-24	lctP			C	L-lactate permease
CJAHOPNC_00676	5.3e-50	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00677	3.5e-239	ydjN			U	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CJAHOPNC_00678	1.1e-131	znuB			U	ABC 3 transport family
CJAHOPNC_00679	7.2e-118	fhuC			P	ABC transporter
CJAHOPNC_00680	6.2e-160	psaA			P	Belongs to the bacterial solute-binding protein 9 family
CJAHOPNC_00681	1e-41				K	helix_turn_helix, Arsenical Resistance Operon Repressor
CJAHOPNC_00682	0.0	fruA	2.7.1.202, 2.7.1.204		GT	Phosphotransferase System
CJAHOPNC_00683	4.7e-132	glvR			K	Helix-turn-helix domain, rpiR family
CJAHOPNC_00684	8.6e-187	ansA	3.5.1.1		EJ	L-asparaginase, type I
CJAHOPNC_00685	3.2e-15
CJAHOPNC_00686	7.7e-123
CJAHOPNC_00687	1.2e-238				S	response to antibiotic
CJAHOPNC_00688	1.7e-18	racD	5.1.1.13		M	Belongs to the aspartate glutamate racemases family
CJAHOPNC_00689	1.1e-126	pgm3			G	Phosphoglycerate mutase family
CJAHOPNC_00690	4.9e-87	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00691	3.6e-51	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00692	6.5e-120	XK27_08875			O	PFAM peptidase M10A and M12B, matrixin and adamalysin
CJAHOPNC_00693	0.0	helD	3.6.4.12		L	DNA helicase
CJAHOPNC_00694	4.7e-109	glnP			P	ABC transporter permease
CJAHOPNC_00695	4.5e-109	glnQ	3.6.3.21		E	ABC transporter
CJAHOPNC_00696	6.1e-151	aatB			ET	ABC transporter substrate-binding protein
CJAHOPNC_00697	2.2e-78	yjcF			S	Acetyltransferase (GNAT) domain
CJAHOPNC_00698	1.3e-104				E	GDSL-like Lipase/Acylhydrolase
CJAHOPNC_00699	2.1e-171	coaA	2.7.1.33		F	Pantothenic acid kinase
CJAHOPNC_00700	5.8e-103	efp			J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CJAHOPNC_00701	1.4e-217				G	Bacterial extracellular solute-binding protein
CJAHOPNC_00702	2.8e-67				S	Peptidase propeptide and YPEB domain
CJAHOPNC_00704	1.3e-95				F	Nucleoside 2-deoxyribosyltransferase
CJAHOPNC_00705	1.6e-188	add	3.5.4.4		F	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CJAHOPNC_00706	9.3e-180	pip	3.4.11.5		E	Releases the N-terminal proline from various substrates
CJAHOPNC_00707	1.1e-167				V	ABC transporter transmembrane region
CJAHOPNC_00708	2.7e-96				V	ABC transporter transmembrane region
CJAHOPNC_00709	2.9e-139	pnuC			H	nicotinamide mononucleotide transporter
CJAHOPNC_00710	1.3e-11				S	Protein of unknown function (DUF3290)
CJAHOPNC_00711	1e-41				S	Protein of unknown function (DUF3290)
CJAHOPNC_00712	3.4e-33
CJAHOPNC_00713	2.1e-39
CJAHOPNC_00714	4.6e-91		3.6.1.55		L	NUDIX domain
CJAHOPNC_00715	3.5e-171	fba	4.1.2.13, 4.1.2.29		G	Fructose-1,6-bisphosphate aldolase, class II
CJAHOPNC_00716	0.0	argS	6.1.1.19		J	Arginyl-tRNA synthetase
CJAHOPNC_00718	3.5e-114		3.6.4.12		S	PD-(D/E)XK nuclease family transposase
CJAHOPNC_00719	7.4e-105	padC			Q	Phenolic acid decarboxylase
CJAHOPNC_00720	1e-72	padR			K	Virulence activator alpha C-term
CJAHOPNC_00721	1.5e-110				M	ErfK YbiS YcfS YnhG
CJAHOPNC_00722	4.3e-155	nnrD	4.2.1.136, 5.1.99.6		H	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CJAHOPNC_00723	2.2e-243	dacA	3.4.16.4		M	Belongs to the peptidase S11 family
CJAHOPNC_00725	2e-49	pspC			KT	PspC domain
CJAHOPNC_00726	1e-31	psd	4.1.1.65		I	Belongs to the phosphatidylserine decarboxylase family
CJAHOPNC_00727	5.4e-28		3.6.4.12		S	PD-(D/E)XK nuclease family transposase
CJAHOPNC_00728	2.8e-39	frnE			Q	DSBA-like thioredoxin domain
CJAHOPNC_00729	1.2e-18	frnE			Q	DSBA-like thioredoxin domain
CJAHOPNC_00730	1.7e-10	frnE			Q	DSBA-like thioredoxin domain
CJAHOPNC_00731	4.1e-175	trxB	1.8.1.9		C	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CJAHOPNC_00732	9.4e-118	M1-798			K	Rhodanese Homology Domain
CJAHOPNC_00733	7.5e-59				CO	Thioredoxin
CJAHOPNC_00734	5.6e-21
CJAHOPNC_00735	2.7e-19	atl	3.2.1.96, 3.5.1.28	GH73	UW	LPXTG-motif cell wall anchor domain protein
CJAHOPNC_00736	3e-21				UW	LPXTG-motif cell wall anchor domain protein
CJAHOPNC_00737	6.8e-18	infB			UW	LPXTG-motif cell wall anchor domain protein
CJAHOPNC_00738	2.5e-35	infB			UW	LPXTG-motif cell wall anchor domain protein
CJAHOPNC_00739	4.8e-68				O	Belongs to the peptidase S8 family
CJAHOPNC_00740	7e-87				O	Belongs to the peptidase S8 family
CJAHOPNC_00741	1.5e-20	dhaK	2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15		G	Dak1 domain
CJAHOPNC_00742	6.8e-298	ytgP			S	Polysaccharide biosynthesis protein
CJAHOPNC_00743	0.0	leuS	6.1.1.4		J	Belongs to the class-I aminoacyl-tRNA synthetase family
CJAHOPNC_00744	4.6e-120		3.6.1.27		I	Acid phosphatase homologues
CJAHOPNC_00745	1.6e-43	hepT	2.5.1.30, 2.5.1.90		H	Belongs to the FPP GGPP synthase family
CJAHOPNC_00746	4.5e-54
CJAHOPNC_00747	5.6e-103	dut	3.6.1.23, 4.1.1.36, 6.3.2.5		F	dUTP diphosphatase
CJAHOPNC_00748	4.1e-256	radA			O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CJAHOPNC_00749	1.1e-291	gltX	6.1.1.17, 6.1.1.24		J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CJAHOPNC_00750	8.3e-276	cysS	6.1.1.16, 6.3.1.13		J	Belongs to the class-I aminoacyl-tRNA synthetase family
CJAHOPNC_00751	7.9e-76	mrnC			J	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CJAHOPNC_00752	4.5e-140	rlmB	2.1.1.185		J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJAHOPNC_00753	1.2e-94	sigH			K	Belongs to the sigma-70 factor family
CJAHOPNC_00754	8.3e-34
CJAHOPNC_00755	9.6e-283	gntK	2.7.1.12, 2.7.1.17		G	Belongs to the FGGY kinase family
CJAHOPNC_00756	5.4e-87	dxs	2.2.1.7		H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CJAHOPNC_00757	1.1e-78	dxs	2.2.1.7		H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CJAHOPNC_00758	2.4e-98	dxs	2.2.1.7		H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CJAHOPNC_00759	5.9e-24	secE			U	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CJAHOPNC_00760	1.4e-101	nusG			K	Participates in transcription elongation, termination and antitermination
CJAHOPNC_00761	2e-68	rplK			J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CJAHOPNC_00762	3.2e-124	rplA			J	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CJAHOPNC_00763	5.1e-131	ybbM			S	Uncharacterised protein family (UPF0014)
CJAHOPNC_00764	3.1e-113	ybbL			S	ABC transporter, ATP-binding protein
CJAHOPNC_00765	3.9e-30	WQ51_00220			K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00767	2e-33
CJAHOPNC_00770	3.7e-96				L	Belongs to the 'phage' integrase family
CJAHOPNC_00771	2.1e-106				L	Belongs to the 'phage' integrase family
CJAHOPNC_00772	1.6e-27
CJAHOPNC_00773	1.1e-57
CJAHOPNC_00774	3e-145				S	Replication initiation factor
CJAHOPNC_00775	2.6e-146				D	Ftsk spoiiie family protein
CJAHOPNC_00776	3.3e-36
CJAHOPNC_00777	3.1e-40
CJAHOPNC_00778	1.5e-16
CJAHOPNC_00779	1.5e-39
CJAHOPNC_00780	4.3e-15				K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00783	7.3e-152				L	Belongs to the 'phage' integrase family
CJAHOPNC_00784	4.8e-17
CJAHOPNC_00785	4.6e-138	repB			EP	Plasmid replication protein
CJAHOPNC_00786	2.5e-31
CJAHOPNC_00787	1.7e-167				D	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
CJAHOPNC_00788	5.8e-33
CJAHOPNC_00789	2.3e-136
CJAHOPNC_00790	6.5e-301		3.1.21.5		L	Type III restriction enzyme, res subunit
CJAHOPNC_00791	3.4e-209		2.1.1.72		L	PFAM DNA methylase N-4 N-6 domain protein
CJAHOPNC_00793	7.5e-121	yhiD			S	MgtC family
CJAHOPNC_00794	3.8e-11				I	Protein of unknown function (DUF2974)
CJAHOPNC_00795	1.6e-179				I	Protein of unknown function (DUF2974)
CJAHOPNC_00796	4.7e-36
CJAHOPNC_00798	2.4e-169	scrK	2.7.1.2, 2.7.1.4		GK	ROK family
CJAHOPNC_00799	4.1e-175	degV			S	DegV family
CJAHOPNC_00800	9.7e-75	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00801	2.1e-88	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00802	9.8e-169	phnD			P	ABC transporter, phosphonate, periplasmic substrate-binding protein
CJAHOPNC_00803	1.2e-255	dnaB	3.6.4.12		L	Participates in initiation and elongation during chromosome replication
CJAHOPNC_00804	4.3e-69	rplI			J	Binds to the 23S rRNA
CJAHOPNC_00805	0.0	yybT			T	signaling protein consisting of a modified GGDEF domain and a DHH domain
CJAHOPNC_00806	9.8e-64				S	SLAP domain
CJAHOPNC_00807	4e-74				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00808	2.3e-50				KLT	Protein kinase domain
CJAHOPNC_00809	8e-297				KLT	Protein kinase domain
CJAHOPNC_00810	4e-66				V	ABC transporter transmembrane region
CJAHOPNC_00812	1.5e-266	fumC	4.2.1.2		C	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CJAHOPNC_00813	5.4e-264	frdC	1.3.5.4		C	FAD binding domain
CJAHOPNC_00815	2.2e-56				M	domain protein
CJAHOPNC_00817	6.2e-13				M	domain protein
CJAHOPNC_00818	9.1e-126				S	YSIRK type signal peptide
CJAHOPNC_00820	1.6e-10				UW	LPXTG-motif cell wall anchor domain protein
CJAHOPNC_00821	8.5e-42				UW	LPXTG-motif cell wall anchor domain protein
CJAHOPNC_00823	7.2e-16	ps301			K	sequence-specific DNA binding
CJAHOPNC_00824	8.1e-96	folA	1.5.1.3		H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CJAHOPNC_00825	6.7e-189	thyA	2.1.1.45		F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CJAHOPNC_00827	5.7e-116	cbh	3.5.1.24		M	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CJAHOPNC_00828	7.8e-100		3.6.1.27		I	Acid phosphatase homologues
CJAHOPNC_00829	8.8e-21				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_00831	2.3e-24
CJAHOPNC_00832	2.6e-53				L	Replication initiation factor
CJAHOPNC_00833	7.6e-36
CJAHOPNC_00836	1.4e-29
CJAHOPNC_00837	3.7e-26
CJAHOPNC_00838	6.4e-17				K	transcriptional
CJAHOPNC_00840	1.5e-118	sip			L	Belongs to the 'phage' integrase family
CJAHOPNC_00841	1.5e-19	pfoS			S	Phosphotransferase system, EIIC
CJAHOPNC_00842	6.9e-78	pfoS			S	Phosphotransferase system, EIIC
CJAHOPNC_00843	9.5e-11	pfoS			S	Phosphotransferase system, EIIC
CJAHOPNC_00844	7.5e-147	slpX			S	SLAP domain
CJAHOPNC_00845	2.6e-92
CJAHOPNC_00848	2.7e-213
CJAHOPNC_00849	7.4e-121	gntR1			K	UTRA
CJAHOPNC_00850	1.8e-55	tagD	2.7.7.15, 2.7.7.39		IM	Glycerol-3-phosphate cytidylyltransferase
CJAHOPNC_00851	1.2e-40	mscL			M	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CJAHOPNC_00852	4.6e-54	trxA			O	Belongs to the thioredoxin family
CJAHOPNC_00853	0.0	mutS2			L	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CJAHOPNC_00854	6.2e-51	yrzB			S	Belongs to the UPF0473 family
CJAHOPNC_00855	3.6e-73	yqgF			J	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CJAHOPNC_00856	2e-42	yrzL			S	Belongs to the UPF0297 family
CJAHOPNC_00857	0.0	alaS	6.1.1.7		J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CJAHOPNC_00858	1.3e-230	cshB	3.6.4.13		JKL	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CJAHOPNC_00859	6.1e-182	nrnA	3.1.13.3, 3.1.3.7		S	DHHA1 domain protein
CJAHOPNC_00860	7.1e-214	dinB	2.7.7.7		L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CJAHOPNC_00861	1.1e-288	zwf	1.1.1.363, 1.1.1.49		G	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CJAHOPNC_00862	7.5e-39	yajC			U	Preprotein translocase
CJAHOPNC_00863	6.1e-188	ruvB	3.6.4.12		L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CJAHOPNC_00864	7e-104	ruvA	3.6.4.12		L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CJAHOPNC_00865	0.0	mutL			L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CJAHOPNC_00866	0.0	mutS			L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CJAHOPNC_00867	2.9e-293	groL			O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CJAHOPNC_00868	3.9e-44	groS			O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CJAHOPNC_00869	2.5e-158	sip			L	Belongs to the 'phage' integrase family
CJAHOPNC_00870	1.3e-17				K	Transcriptional regulator
CJAHOPNC_00871	5.7e-27
CJAHOPNC_00872	2.8e-16
CJAHOPNC_00874	4.2e-34
CJAHOPNC_00876	1.5e-69
CJAHOPNC_00877	1.6e-91
CJAHOPNC_00878	6.4e-26
CJAHOPNC_00879	1.4e-49
CJAHOPNC_00880	1.2e-103		2.7.1.199, 2.7.1.211		G	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CJAHOPNC_00881	1.4e-15	scrR			K	Transcriptional regulator, LacI family
CJAHOPNC_00882	1.2e-92	scrR			K	Transcriptional regulator, LacI family
CJAHOPNC_00883	6.5e-123	liaI			S	membrane
CJAHOPNC_00884	7.9e-79	XK27_02470			K	LytTr DNA-binding domain
CJAHOPNC_00885	5.7e-116	rex			K	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CJAHOPNC_00886	0.0	uup			S	ABC transporter, ATP-binding protein
CJAHOPNC_00887	1.1e-12	oxc	4.1.1.8		EH	Belongs to the TPP enzyme family
CJAHOPNC_00888	5.7e-215	oxc	4.1.1.8		EH	Belongs to the TPP enzyme family
CJAHOPNC_00889	1.1e-37	oxc	4.1.1.8		EH	Belongs to the TPP enzyme family
CJAHOPNC_00890	1.1e-26	frc	2.8.3.16		C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CJAHOPNC_00891	1.1e-74	frc	2.8.3.16, 2.8.3.19		C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CJAHOPNC_00892	1.9e-80	frc	2.8.3.16, 2.8.3.19		C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CJAHOPNC_00893	6.5e-234	yfdE	2.8.3.19		C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CJAHOPNC_00894	1.7e-19				S	Toxin ToxN, type III toxin-antitoxin system
CJAHOPNC_00895	5.7e-250	cbiO1			S	ABC transporter, ATP-binding protein
CJAHOPNC_00896	2.3e-92				P	Cobalt transport protein
CJAHOPNC_00897	6e-176	pepI	3.4.11.5, 3.5.1.101		E	Releases the N-terminal proline from various substrates
CJAHOPNC_00898	2.7e-188	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_00899	6.6e-31				K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00900	1.5e-91	rlmH	2.1.1.177		J	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CJAHOPNC_00901	2e-180	htrA	3.4.21.107		O	serine protease
CJAHOPNC_00902	6.1e-51	vicX	3.1.26.11		S	domain protein
CJAHOPNC_00903	4.5e-82	vicX	3.1.26.11		S	domain protein
CJAHOPNC_00904	3.8e-145	yycI			S	YycH protein
CJAHOPNC_00905	1.2e-244	yycH			S	YycH protein
CJAHOPNC_00906	1.5e-306	vicK	2.7.13.3		T	Histidine kinase
CJAHOPNC_00907	5.3e-130				K	response regulator
CJAHOPNC_00909	6.7e-11				L	Transposase
CJAHOPNC_00910	4.4e-166				S	SLAP domain
CJAHOPNC_00911	1.5e-135
CJAHOPNC_00912	2.7e-197				S	SLAP domain
CJAHOPNC_00913	7.8e-148	arbV	2.3.1.51		I	Acyl-transferase
CJAHOPNC_00914	4.5e-67
CJAHOPNC_00915	1.9e-14
CJAHOPNC_00916	2.1e-120				K	Helix-turn-helix domain
CJAHOPNC_00917	4e-13				K	Helix-turn-helix domain
CJAHOPNC_00918	4.1e-158	arbx			M	Glycosyl transferase family 8
CJAHOPNC_00919	2.2e-187	arbY			M	Glycosyl transferase family 8
CJAHOPNC_00920	3.7e-10	arbY			M	Glycosyl transferase family 8
CJAHOPNC_00921	3e-66	arbY			M	Glycosyl transferase family 8
CJAHOPNC_00922	7.9e-84	arbY			M	Glycosyl transferase family 8
CJAHOPNC_00923	7.3e-166	arbZ			I	Phosphate acyltransferases
CJAHOPNC_00924	1.3e-34				S	Cytochrome b5
CJAHOPNC_00925	7.7e-109				K	Transcriptional regulator, LysR family
CJAHOPNC_00927	5.1e-63				K	LysR substrate binding domain
CJAHOPNC_00928	6.5e-40				K	LysR substrate binding domain
CJAHOPNC_00929	3.5e-219	coaBC	4.1.1.36, 6.3.2.5		H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CJAHOPNC_00930	2.4e-158				S	reductase
CJAHOPNC_00931	1.9e-84	yxeH			S	hydrolase
CJAHOPNC_00932	2.1e-45	yxeH			S	hydrolase
CJAHOPNC_00933	1.1e-14	gyaR	1.1.1.26, 2.7.1.165		CH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJAHOPNC_00934	1.7e-77	gyaR	1.1.1.26, 2.7.1.165		CH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJAHOPNC_00935	3.3e-43	gyaR	1.1.1.26, 2.7.1.165		CH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJAHOPNC_00936	3.1e-243	yfnA			E	Amino Acid
CJAHOPNC_00937	2.7e-68	dedA	3.1.3.1		S	SNARE associated Golgi protein
CJAHOPNC_00938	2.5e-29				L	Transposase
CJAHOPNC_00939	7.4e-48	ade	3.5.4.2		F	Adenine deaminase C-terminal domain
CJAHOPNC_00940	1.8e-142	potD2			P	ABC transporter
CJAHOPNC_00941	1.4e-136	potA11			P	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CJAHOPNC_00942	9.8e-109	potC3			E	Binding-protein-dependent transport system inner membrane component
CJAHOPNC_00943	1.1e-102	potB			E	Binding-protein-dependent transport system inner membrane component
CJAHOPNC_00944	1.7e-48	rihB	3.2.2.1		F	Nucleoside
CJAHOPNC_00945	7.5e-31	rihB	3.2.2.1		F	Inosine-uridine preferring nucleoside hydrolase
CJAHOPNC_00946	2.1e-55	infC			J	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CJAHOPNC_00947	8.1e-28	rpmI			J	Belongs to the bacterial ribosomal protein bL35 family
CJAHOPNC_00948	3.3e-56	rplT			J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CJAHOPNC_00949	1.3e-93	yqeG			S	HAD phosphatase, family IIIA
CJAHOPNC_00950	1.3e-212	yqeH			S	Ribosome biogenesis GTPase YqeH
CJAHOPNC_00951	1.2e-123	nadD	2.7.7.18, 3.6.1.55		H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CJAHOPNC_00952	2.3e-110	nadD	2.7.6.3, 2.7.7.18		H	Hydrolase, HD family
CJAHOPNC_00953	6.9e-59	rsfS			J	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CJAHOPNC_00954	6.6e-215	ylbM			S	Belongs to the UPF0348 family
CJAHOPNC_00955	4.1e-98	yceD			S	Uncharacterized ACR, COG1399
CJAHOPNC_00956	3.2e-127				K	response regulator
CJAHOPNC_00957	3.2e-281	arlS	2.7.13.3		T	Histidine kinase
CJAHOPNC_00958	1.6e-85				S	Aminoacyl-tRNA editing domain
CJAHOPNC_00959	7.8e-153	yidC			U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CJAHOPNC_00960	2.2e-44	acyP	3.6.1.7		C	Belongs to the acylphosphatase family
CJAHOPNC_00961	3e-139	spoU	2.1.1.185		J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJAHOPNC_00962	1.7e-267	aglB	3.2.1.122, 3.2.1.86	GH4,GT4	G	Family 4 glycosyl hydrolase C-terminal domain
CJAHOPNC_00963	3.7e-32
CJAHOPNC_00964	5.3e-95
CJAHOPNC_00965	1.8e-104		3.2.2.20		K	acetyltransferase
CJAHOPNC_00966	2.6e-111	pbpX2			V	Beta-lactamase
CJAHOPNC_00967	1.1e-161	rluA	5.4.99.23		J	Responsible for synthesis of pseudouridine from uracil
CJAHOPNC_00968	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	penicillin-binding protein
CJAHOPNC_00969	1.2e-55	yheA			S	Belongs to the UPF0342 family
CJAHOPNC_00970	1.8e-231	yhaO			L	Ser Thr phosphatase family protein
CJAHOPNC_00971	0.0				L	AAA domain
CJAHOPNC_00972	5.6e-55	cbf			S	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJAHOPNC_00973	3.1e-121	cbf			S	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJAHOPNC_00974	4e-77				S	PAS domain
CJAHOPNC_00975	5.4e-156	prsA	5.2.1.8		M	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CJAHOPNC_00976	8e-28
CJAHOPNC_00977	3.1e-80	hit			FG	Scavenger mRNA decapping enzyme C-term binding
CJAHOPNC_00978	3.3e-34				S	Plasmid maintenance system killer
CJAHOPNC_00979	2.9e-41	higA			K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_00980	3.9e-136	ecsA			V	ABC transporter, ATP-binding protein
CJAHOPNC_00981	4.4e-214	ecsB			U	ABC transporter
CJAHOPNC_00982	1e-124	trmB	2.1.1.297, 2.1.1.33		J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CJAHOPNC_00983	3.6e-54	ytpP	2.7.1.180, 5.3.4.1		CO	Thioredoxin
CJAHOPNC_00984	1.7e-122	pheT	6.1.1.20		J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CJAHOPNC_00985	1.4e-157				S	SLAP domain
CJAHOPNC_00986	2.5e-147				S	SLAP domain
CJAHOPNC_00987	4.8e-254	mpl	6.3.2.4, 6.3.2.45, 6.3.2.8		M	Belongs to the MurCDEF family
CJAHOPNC_00988	1.9e-175				S	SLAP domain
CJAHOPNC_00989	3.4e-288				M	Peptidase family M1 domain
CJAHOPNC_00990	1.1e-194				S	Bacteriocin helveticin-J
CJAHOPNC_00991	1.1e-19
CJAHOPNC_00992	2.2e-51				L	RelB antitoxin
CJAHOPNC_00993	3.5e-139	qmcA			O	prohibitin homologues
CJAHOPNC_00994	3.3e-308	fhs	6.3.4.3		F	Belongs to the formate--tetrahydrofolate ligase family
CJAHOPNC_00995	1.9e-78	purE	5.4.99.18		F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CJAHOPNC_00996	3.5e-219	purK	6.3.4.18		F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CJAHOPNC_00997	8.7e-133	purC	4.1.1.21, 4.3.2.2, 6.3.2.6		F	Belongs to the SAICAR synthetase family
CJAHOPNC_00998	6.4e-38	purS	6.3.2.6, 6.3.5.3		F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJAHOPNC_00999	3.9e-127	purQ	6.3.5.3		F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJAHOPNC_01000	0.0	purL	6.3.5.3		F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJAHOPNC_01001	1.5e-275	purF	2.4.2.14		F	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CJAHOPNC_01002	3.3e-197	purM	6.3.3.1, 6.3.4.13		F	Phosphoribosylformylglycinamidine cyclo-ligase
CJAHOPNC_01003	1.1e-104	purN	2.1.2.2		F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CJAHOPNC_01004	5.4e-289	purH	2.1.2.3, 3.5.4.10		F	Bifunctional purine biosynthesis protein PurH
CJAHOPNC_01005	9.7e-236	purD	6.3.4.13		F	Belongs to the GARS family
CJAHOPNC_01007	1.5e-39
CJAHOPNC_01008	1.6e-154	dprA			LU	DNA protecting protein DprA
CJAHOPNC_01009	0.0	topA	5.99.1.2		L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CJAHOPNC_01010	7.2e-250	trmFO	2.1.1.74		J	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CJAHOPNC_01011	3e-170	xerC			D	Phage integrase, N-terminal SAM-like domain
CJAHOPNC_01012	3e-90	hslV	3.4.25.2		O	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CJAHOPNC_01013	7.7e-234	hslU			O	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CJAHOPNC_01014	4e-175	lacX	5.1.3.3		G	Aldose 1-epimerase
CJAHOPNC_01015	3.3e-20				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_01017	3.6e-151	xerD			L	Phage integrase, N-terminal SAM-like domain
CJAHOPNC_01018	8.4e-66	crcB			U	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CJAHOPNC_01019	2.9e-63	crcB			U	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CJAHOPNC_01020	0.0	yaaO	4.1.1.17, 4.1.1.19		E	Orn/Lys/Arg decarboxylase, C-terminal domain
CJAHOPNC_01021	2.9e-276				E	Amino acid permease
CJAHOPNC_01022	2e-73				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_01023	1.8e-113				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_01024	2.2e-290				K	Putative DNA-binding domain
CJAHOPNC_01025	1e-163				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_01026	2.9e-40				L	transposase, IS605 OrfB family
CJAHOPNC_01027	2.6e-139				K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CJAHOPNC_01028	1e-23				K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CJAHOPNC_01029	1.5e-106				K	Bacterial regulatory proteins, tetR family
CJAHOPNC_01030	1.3e-254				V	Restriction endonuclease
CJAHOPNC_01031	2.8e-35	pipD			E	Dipeptidase
CJAHOPNC_01032	2.4e-101	pipD			E	Dipeptidase
CJAHOPNC_01033	7.5e-58				S	YcaO cyclodehydratase, ATP-ad Mg2+-binding
CJAHOPNC_01034	4.3e-194	asnA	6.3.1.1		F	aspartate--ammonia ligase
CJAHOPNC_01035	4.8e-204		4.2.1.126		S	Bacterial protein of unknown function (DUF871)
CJAHOPNC_01038	1.3e-184	guaC	1.1.1.205, 1.7.1.7		F	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CJAHOPNC_01039	1.9e-250	purA	6.3.4.4		F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CJAHOPNC_01040	8.1e-246	purB	4.3.2.2		F	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CJAHOPNC_01041	2.1e-58
CJAHOPNC_01042	2.8e-87
CJAHOPNC_01043	2.2e-74	yheS_2			S	ATPases associated with a variety of cellular activities
CJAHOPNC_01044	2.7e-71	yheS_2			S	ATPases associated with a variety of cellular activities
CJAHOPNC_01045	4.6e-177	XK27_05540			S	DUF218 domain
CJAHOPNC_01046	1.3e-79
CJAHOPNC_01047	4.6e-109
CJAHOPNC_01048	4.4e-138				EG	EamA-like transporter family
CJAHOPNC_01049	2.5e-22				S	Protein of unknown function (DUF2929)
CJAHOPNC_01050	0.0	dnaE	2.7.7.7		L	DNA polymerase
CJAHOPNC_01051	7.3e-183	pfkA	2.7.1.11		F	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CJAHOPNC_01052	0.0	pyk	2.7.1.40, 2.7.7.4		G	Belongs to the pyruvate kinase family
CJAHOPNC_01053	5e-170	cvfB			S	S1 domain
CJAHOPNC_01054	4e-167	xerD			D	recombinase XerD
CJAHOPNC_01055	4.9e-60	ribT			K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CJAHOPNC_01056	2.5e-130	scpA			D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CJAHOPNC_01057	4.1e-104	scpB			D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CJAHOPNC_01058	1e-128	rluB	5.4.99.19, 5.4.99.21, 5.4.99.22		J	Belongs to the pseudouridine synthase RsuA family
CJAHOPNC_01059	1.2e-121				U	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CJAHOPNC_01060	2.4e-30				M	Lysin motif
CJAHOPNC_01061	3.5e-115	cmk	1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1		F	Belongs to the cytidylate kinase family. Type 1 subfamily
CJAHOPNC_01062	3.3e-209	rpsA	1.17.7.4		J	Ribosomal protein S1
CJAHOPNC_01063	8.2e-246	der	1.1.1.399, 1.1.1.95		S	GTPase that plays an essential role in the late steps of ribosome biogenesis
CJAHOPNC_01064	2.3e-41	hup			L	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CJAHOPNC_01065	3.9e-229				S	Tetratricopeptide repeat protein
CJAHOPNC_01066	3.2e-161	ypjC			S	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJAHOPNC_01067	1.1e-225	cca	2.7.7.19, 2.7.7.72		J	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CJAHOPNC_01068	6.7e-114	hlyIII			S	protein, hemolysin III
CJAHOPNC_01069	7.7e-149	DegV			S	Uncharacterised protein, DegV family COG1307
CJAHOPNC_01070	9.3e-36	yozE			S	Belongs to the UPF0346 family
CJAHOPNC_01071	4.6e-228	yjcE			P	Sodium proton antiporter
CJAHOPNC_01072	3.5e-36	yjcE			P	Sodium proton antiporter
CJAHOPNC_01073	7.6e-160	ylqF			S	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CJAHOPNC_01074	2.9e-134	rnhB	3.1.26.4		L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CJAHOPNC_01075	6.3e-44
CJAHOPNC_01076	9.2e-178				S	Oxidoreductase family, NAD-binding Rossmann fold
CJAHOPNC_01077	9.2e-131	gepA			K	Protein of unknown function (DUF4065)
CJAHOPNC_01078	0.0	yjbQ			P	TrkA C-terminal domain protein
CJAHOPNC_01079	1.1e-208	atl	3.2.1.96, 3.5.1.28	GH73	M	N-acetylmuramoyl-L-alanine amidase
CJAHOPNC_01080	6.1e-211				NU	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CJAHOPNC_01081	1.7e-38
CJAHOPNC_01083	1.3e-179				S	SLAP domain
CJAHOPNC_01084	1.4e-16				S	Protein of unknown function (DUF2922)
CJAHOPNC_01085	4.3e-27
CJAHOPNC_01087	1.2e-73
CJAHOPNC_01088	0.0	kup			P	Transport of potassium into the cell
CJAHOPNC_01089	0.0	pepO	3.4.24.71		O	Peptidase family M13
CJAHOPNC_01090	2.1e-227	yttB			EGP	Major facilitator Superfamily
CJAHOPNC_01091	5.5e-106	XK27_04775			S	PAS domain
CJAHOPNC_01092	9.4e-115	XK27_04775			S	PAS domain
CJAHOPNC_01093	1.6e-100				S	Iron-sulfur cluster assembly protein
CJAHOPNC_01094	4.3e-140	nrdG	1.97.1.4		O	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CJAHOPNC_01095	1.5e-232	nrdD	1.1.98.6		F	Ribonucleoside-triphosphate reductase
CJAHOPNC_01096	1.5e-208	nrdD	1.1.98.6		F	Ribonucleoside-triphosphate reductase
CJAHOPNC_01099	8e-254	yxbA	6.3.1.12		S	ATP-grasp enzyme
CJAHOPNC_01100	0.0	asnB	6.3.5.4		E	Asparagine synthase
CJAHOPNC_01101	1.3e-273				S	Calcineurin-like phosphoesterase
CJAHOPNC_01102	2.5e-83
CJAHOPNC_01103	2e-108	tag	3.2.2.20		L	glycosylase
CJAHOPNC_01104	1.2e-149	phnE	3.6.1.63		P	Binding-protein-dependent transport system inner membrane component
CJAHOPNC_01105	9.1e-131	phnE	3.6.1.63		P	Binding-protein-dependent transport system inner membrane component
CJAHOPNC_01106	5.2e-139	phnC	3.6.3.28		P	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CJAHOPNC_01107	9.9e-153	phnD			P	Phosphonate ABC transporter
CJAHOPNC_01108	4.2e-86	uspA			T	universal stress protein
CJAHOPNC_01113	3.8e-64	emrY			EGP	Major facilitator Superfamily
CJAHOPNC_01114	2.5e-50	emrY			EGP	Major facilitator Superfamily
CJAHOPNC_01115	4.8e-31				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_01116	3.4e-274	pepV	3.5.1.18		E	dipeptidase PepV
CJAHOPNC_01117	5.2e-192				V	Beta-lactamase
CJAHOPNC_01118	0.0	ppc	4.1.1.31		H	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CJAHOPNC_01119	3.3e-47
CJAHOPNC_01120	8.1e-137
CJAHOPNC_01121	2.2e-78	XK27_09675			K	Acetyltransferase (GNAT) domain
CJAHOPNC_01122	4e-53				S	Protein of unknown function (DUF3021)
CJAHOPNC_01123	1.6e-76				K	LytTr DNA-binding domain
CJAHOPNC_01124	7.2e-43
CJAHOPNC_01125	1.5e-123	magIII			L	Base excision DNA repair protein, HhH-GPD family
CJAHOPNC_01126	6.5e-57	folB	1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8		H	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CJAHOPNC_01127	6.6e-201	folE	1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8		F	GTP cyclohydrolase 1
CJAHOPNC_01128	6.2e-249	folC	6.3.2.12, 6.3.2.17		H	Belongs to the folylpolyglutamate synthase family
CJAHOPNC_01129	1.8e-201	folP	2.5.1.15		H	dihydropteroate synthase
CJAHOPNC_01130	3.1e-98		3.6.1.55, 3.6.1.67		F	NUDIX domain
CJAHOPNC_01131	6.2e-75	hutG	3.5.3.8		E	N-formylglutamate amidohydrolase
CJAHOPNC_01132	3.4e-25				S	Uncharacterized protein conserved in bacteria (DUF2255)
CJAHOPNC_01133	4.6e-70	adhR			K	helix_turn_helix, mercury resistance
CJAHOPNC_01134	6e-112	papP			P	ABC transporter, permease protein
CJAHOPNC_01135	4e-79				P	ABC transporter permease
CJAHOPNC_01136	9.7e-135	glnQ	3.6.3.21		E	ABC transporter, ATP-binding protein
CJAHOPNC_01137	9.1e-161	cjaA			ET	ABC transporter substrate-binding protein
CJAHOPNC_01138	3.6e-73				L	Helix-turn-helix domain
CJAHOPNC_01139	1.7e-42				L	Helix-turn-helix domain
CJAHOPNC_01140	1e-195				L	hmm pf00665
CJAHOPNC_01141	1.4e-88	dam	2.1.1.72		H	Site-specific DNA-methyltransferase (adenine-specific)
CJAHOPNC_01144	1.4e-115				L	Integrase
CJAHOPNC_01146	2.2e-254	gor	1.8.1.7		C	Glutathione reductase
CJAHOPNC_01147	4e-95				K	Acetyltransferase (GNAT) family
CJAHOPNC_01148	1.4e-57				S	Alpha beta hydrolase
CJAHOPNC_01149	2.1e-39				S	Hydrolases of the alpha beta superfamily
CJAHOPNC_01150	9.9e-143	nfrA	1.5.1.38, 1.5.1.39		C	nitroreductase
CJAHOPNC_01151	5.4e-135
CJAHOPNC_01152	1.2e-149				EGP	Major facilitator Superfamily
CJAHOPNC_01153	2.6e-47				EGP	Major facilitator Superfamily
CJAHOPNC_01154	5.9e-103
CJAHOPNC_01155	2.8e-63				S	Fic/DOC family
CJAHOPNC_01156	1.5e-53
CJAHOPNC_01157	9.2e-69				S	Putative adhesin
CJAHOPNC_01158	2.9e-290				V	ABC-type multidrug transport system, ATPase and permease components
CJAHOPNC_01159	2.7e-123				P	ABC transporter
CJAHOPNC_01160	8.4e-100				P	ABC transporter
CJAHOPNC_01161	5.8e-43				P	ABC transporter
CJAHOPNC_01162	9.7e-61
CJAHOPNC_01163	1.4e-29	fic			D	Fic/DOC family
CJAHOPNC_01164	9.4e-33
CJAHOPNC_01165	1e-256	pepT2	3.4.11.14, 3.4.11.4		E	Cleaves the N-terminal amino acid of tripeptides
CJAHOPNC_01166	1.7e-235	mepA			V	MATE efflux family protein
CJAHOPNC_01167	9e-231				S	Putative peptidoglycan binding domain
CJAHOPNC_01168	4e-93				S	ECF-type riboflavin transporter, S component
CJAHOPNC_01169	1.5e-152	pdxK	2.7.1.35		H	Phosphomethylpyrimidine kinase
CJAHOPNC_01170	2.8e-207	pbpX1			V	Beta-lactamase
CJAHOPNC_01171	2.7e-106	lacA	2.3.1.79		S	Transferase hexapeptide repeat
CJAHOPNC_01172	1.5e-112		3.6.1.27		I	Acid phosphatase homologues
CJAHOPNC_01173	1.3e-81				C	Flavodoxin
CJAHOPNC_01174	0.0	recQ	3.6.4.12		L	ATP-dependent DNA helicase RecQ
CJAHOPNC_01175	7.2e-22	ktrB			P	Potassium uptake protein
CJAHOPNC_01176	2.5e-247	ynbB	4.4.1.1		P	aluminum resistance
CJAHOPNC_01177	0.0	yaaO	4.1.1.17, 4.1.1.19		E	Orn/Lys/Arg decarboxylase, C-terminal domain
CJAHOPNC_01178	8.3e-265	lysC	2.7.2.4		E	Belongs to the aspartokinase family
CJAHOPNC_01179	1.5e-191	dapF	5.1.1.7		E	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CJAHOPNC_01180	1.3e-182	yjeM			E	Amino Acid
CJAHOPNC_01181	4.5e-46	yjeM			E	Amino Acid
CJAHOPNC_01182	7.5e-106	engB			D	Necessary for normal cell division and for the maintenance of normal septation
CJAHOPNC_01183	1.3e-235	clpX			O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CJAHOPNC_01184	6.4e-214	tig			D	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CJAHOPNC_01185	3.3e-225	tuf			J	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CJAHOPNC_01186	2.2e-151
CJAHOPNC_01187	0.0	rnjB			J	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CJAHOPNC_01188	7e-43	rpsO			J	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CJAHOPNC_01189	6.7e-35	rpsT			J	Binds directly to 16S ribosomal RNA
CJAHOPNC_01190	4.8e-174	holA	2.7.7.7		L	DNA polymerase III delta subunit
CJAHOPNC_01191	0.0	comEC			S	Competence protein ComEC
CJAHOPNC_01192	1.9e-84	comEA			L	Competence protein ComEA
CJAHOPNC_01193	1.1e-192	ylbL			T	Belongs to the peptidase S16 family
CJAHOPNC_01194	1.6e-85	coaD	2.7.7.3		H	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CJAHOPNC_01195	2.2e-96	rsmD	2.1.1.171		L	RNA methyltransferase, RsmD family
CJAHOPNC_01196	3.6e-52	ylbG			S	Uncharacterized protein conserved in bacteria (DUF2129)
CJAHOPNC_01197	4.4e-206	ftsW			D	Belongs to the SEDS family
CJAHOPNC_01198	0.0	typA			T	GTP-binding protein TypA
CJAHOPNC_01199	8.9e-101	def	3.5.1.31, 3.5.1.88		J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CJAHOPNC_01200	4.2e-33	ykzG			S	Belongs to the UPF0356 family
CJAHOPNC_01201	0.0	rnjA			J	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CJAHOPNC_01202	2.3e-29	ytlR	2.7.1.91		I	Diacylglycerol kinase catalytic domain
CJAHOPNC_01203	3.5e-106	ytlR	2.7.1.91		I	Diacylglycerol kinase catalytic domain
CJAHOPNC_01204	0.0	recD2	3.1.11.5		L	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CJAHOPNC_01205	2e-104				S	Repeat protein
CJAHOPNC_01206	5.6e-126	pgm6	5.4.2.11, 5.4.2.12		G	Phosphoglycerate mutase family
CJAHOPNC_01207	1.2e-221	mnmA	2.8.1.13		J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CJAHOPNC_01208	5.4e-56	XK27_04120			S	Putative amino acid metabolism
CJAHOPNC_01209	3.5e-216	iscS	2.8.1.7		E	Aminotransferase class V
CJAHOPNC_01210	2.2e-125	mtnN	3.2.2.9		E	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CJAHOPNC_01211	1.3e-37
CJAHOPNC_01212	1.3e-102	nudF	3.6.1.13		L	ADP-ribose pyrophosphatase
CJAHOPNC_01213	2.1e-31	cspA			K	'Cold-shock' DNA-binding domain
CJAHOPNC_01214	0.0	ileS	6.1.1.5		J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CJAHOPNC_01215	3.1e-102	gpsB			D	DivIVA domain protein
CJAHOPNC_01216	5.7e-149	ylmH			S	S4 domain protein
CJAHOPNC_01217	9e-47	yggT			S	YGGT family
CJAHOPNC_01218	1.3e-73	sepF			D	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CJAHOPNC_01219	2.6e-207	ftsZ			D	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CJAHOPNC_01220	5.3e-232	ftsA			D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CJAHOPNC_01221	4.2e-150	divIB			D	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CJAHOPNC_01222	4.4e-208	murG	2.4.1.227, 6.3.2.8	GT28	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CJAHOPNC_01223	4.3e-261	murD	6.3.2.9		M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CJAHOPNC_01224	8.6e-176	mraY	2.7.8.13		M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CJAHOPNC_01225	2.1e-46	ftsI	3.4.16.4		M	Penicillin-binding Protein
CJAHOPNC_01226	0.0	ftsI	3.4.16.4		M	Penicillin-binding Protein
CJAHOPNC_01227	1.4e-54	ftsL			D	Cell division protein FtsL
CJAHOPNC_01228	2e-183	rsmH	2.1.1.199		J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CJAHOPNC_01229	1.8e-77	mraZ			K	Belongs to the MraZ family
CJAHOPNC_01230	4.5e-149				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_01231	9.5e-72				L	COG2963 Transposase and inactivated derivatives
CJAHOPNC_01232	8.8e-18
CJAHOPNC_01233	2.5e-64	XK27_01125			L	IS66 Orf2 like protein
CJAHOPNC_01234	5.8e-32				S	Transposase C of IS166 homeodomain
CJAHOPNC_01235	1.2e-260				L	Transposase IS66 family
CJAHOPNC_01236	0.0				Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CJAHOPNC_01237	1e-187	nfrB	2.4.1.336	GT2	M	Glycosyltransferase like family 2
CJAHOPNC_01238	1.5e-26	nfrB	2.4.1.336	GT2	M	Glycosyltransferase like family 2
CJAHOPNC_01240	3.9e-117				EGP	Major facilitator Superfamily
CJAHOPNC_01241	1.5e-20	hicB			S	protein encoded in hypervariable junctions of pilus gene clusters
CJAHOPNC_01242	3.6e-61
CJAHOPNC_01243	3.1e-104				V	Abi-like protein
CJAHOPNC_01244	4.1e-71				S	Iron-sulphur cluster biosynthesis
CJAHOPNC_01245	7.1e-32
CJAHOPNC_01246	5.4e-68
CJAHOPNC_01247	1.6e-48	pphA	3.1.3.16		T	Calcineurin-like phosphoesterase
CJAHOPNC_01248	2.7e-21	pphA	3.1.3.16		T	Calcineurin-like phosphoesterase
CJAHOPNC_01249	5.6e-13
CJAHOPNC_01250	5.6e-68				M	LysM domain protein
CJAHOPNC_01251	8.2e-196				D	nuclear chromosome segregation
CJAHOPNC_01252	9e-112				G	Phosphoglycerate mutase family
CJAHOPNC_01253	1.7e-229	VY92_08690	5.3.1.32		G	Antibiotic biosynthesis monooxygenase
CJAHOPNC_01254	5.3e-91	glpQ1	3.1.4.46		C	glycerophosphoryl diester phosphodiesterase
CJAHOPNC_01255	5e-204	glf	5.4.99.9		M	UDP-galactopyranose mutase
CJAHOPNC_01256	3.4e-41				M	Glycosyltransferase GT-D fold
CJAHOPNC_01257	2.8e-59			GT2,GT4	M	Glycosyltransferase GT-D fold
CJAHOPNC_01258	4.1e-07				S	Psort location CytoplasmicMembrane, score 10.00
CJAHOPNC_01259	6.6e-169	waaB		GT4	M	Glycosyl transferases group 1
CJAHOPNC_01260	2e-119	cps1D			M	Domain of unknown function (DUF4422)
CJAHOPNC_01261	1e-95	rfbP	2.7.8.6		M	Bacterial sugar transferase
CJAHOPNC_01262	6.9e-144	ywqE	3.1.3.48		GM	PHP domain protein
CJAHOPNC_01263	4e-118	ywqD	2.7.10.1		D	Capsular exopolysaccharide family
CJAHOPNC_01264	6.1e-144	epsB			M	biosynthesis protein
CJAHOPNC_01265	1.4e-179	brpA			K	Cell envelope-like function transcriptional attenuator common domain protein
CJAHOPNC_01266	5e-200	hflX			S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CJAHOPNC_01269	7.4e-140				M	NlpC/P60 family
CJAHOPNC_01270	1.5e-122				M	NlpC P60 family protein
CJAHOPNC_01271	8.6e-46				S	Archaea bacterial proteins of unknown function
CJAHOPNC_01272	6.3e-31				S	Archaea bacterial proteins of unknown function
CJAHOPNC_01273	1.9e-90				M	NlpC/P60 family
CJAHOPNC_01274	1.2e-94	gmk2	2.7.4.8		F	Guanylate kinase homologues.
CJAHOPNC_01275	2.8e-24
CJAHOPNC_01276	3.8e-279				S	O-antigen ligase like membrane protein
CJAHOPNC_01277	3.9e-99
CJAHOPNC_01278	7.4e-112				K	WHG domain
CJAHOPNC_01279	2.8e-38
CJAHOPNC_01280	9.7e-277	pipD			E	Dipeptidase
CJAHOPNC_01281	8.8e-119	devA	3.6.3.25		V	ABC transporter, ATP-binding protein
CJAHOPNC_01282	9.5e-168	hrtB			V	ABC transporter permease
CJAHOPNC_01283	4.1e-95	ygfC			K	Bacterial regulatory proteins, tetR family
CJAHOPNC_01284	9.3e-112				G	phosphoglycerate mutase
CJAHOPNC_01285	8.3e-142	aroD			S	Alpha/beta hydrolase family
CJAHOPNC_01286	6.9e-144				S	Belongs to the UPF0246 family
CJAHOPNC_01287	2.4e-121
CJAHOPNC_01288	1.1e-49		2.7.7.12		C	Domain of unknown function (DUF4931)
CJAHOPNC_01289	7.6e-42				L	transposase, IS605 OrfB family
CJAHOPNC_01290	1.2e-123	dtpT			U	amino acid peptide transporter
CJAHOPNC_01291	0.0	pepN	3.4.11.2		E	aminopeptidase
CJAHOPNC_01292	5e-60	lysM			M	LysM domain
CJAHOPNC_01293	1.5e-172
CJAHOPNC_01294	2.6e-212	mdtG			EGP	Major facilitator Superfamily
CJAHOPNC_01295	6.2e-41	mdlB			V	ABC transporter
CJAHOPNC_01296	2.9e-18				V	ABC transporter
CJAHOPNC_01297	1.1e-123	mdlA			V	ABC transporter
CJAHOPNC_01298	1.1e-264	pepC	3.4.22.40		E	Peptidase C1-like family
CJAHOPNC_01299	4.8e-146	glcU			U	sugar transport
CJAHOPNC_01301	3.5e-25
CJAHOPNC_01302	0.0	mgtA	3.6.3.2		P	COG0474 Cation transport ATPase
CJAHOPNC_01303	7.8e-28
CJAHOPNC_01304	7.8e-61	rarA			L	recombination factor protein RarA
CJAHOPNC_01305	3.9e-33	rarA			L	recombination factor protein RarA
CJAHOPNC_01306	1.2e-130
CJAHOPNC_01307	5e-148
CJAHOPNC_01308	6e-149
CJAHOPNC_01309	2.8e-123	skfE			V	ATPases associated with a variety of cellular activities
CJAHOPNC_01310	3.9e-60	yvoA_1			K	Transcriptional regulator, GntR family
CJAHOPNC_01311	8e-243	pepT	3.4.11.4		E	Cleaves the N-terminal amino acid of tripeptides
CJAHOPNC_01312	2.6e-154	yqfO	3.5.4.16		S	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CJAHOPNC_01313	1.7e-125	trmK	2.1.1.217		S	SAM-dependent methyltransferase
CJAHOPNC_01314	5.1e-30	mutT	3.6.1.55		F	NUDIX domain
CJAHOPNC_01315	1e-124				S	Peptidase family M23
CJAHOPNC_01316	2.9e-199	sigA			K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CJAHOPNC_01317	0.0	dnaG			L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CJAHOPNC_01318	0.0	glyS	6.1.1.14		J	Glycyl-tRNA synthetase beta subunit
CJAHOPNC_01319	4.6e-179	glyQ	6.1.1.14		J	glycyl-tRNA synthetase alpha subunit
CJAHOPNC_01320	3e-136	recO			L	Involved in DNA repair and RecF pathway recombination
CJAHOPNC_01321	1.1e-169	era			S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CJAHOPNC_01322	2.5e-100	ybeY	2.6.99.2, 3.5.4.5		S	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CJAHOPNC_01323	2.1e-174	phoH			T	phosphate starvation-inducible protein PhoH
CJAHOPNC_01324	1.1e-69	yqeY			S	YqeY-like protein
CJAHOPNC_01325	2e-22	rpsU			J	Belongs to the bacterial ribosomal protein bS21 family
CJAHOPNC_01326	8e-154	yqfL	2.7.11.33, 2.7.4.28		F	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CJAHOPNC_01327	9.4e-82				S	Peptidase family M23
CJAHOPNC_01328	2.2e-162	yitT			S	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CJAHOPNC_01329	6.3e-19
CJAHOPNC_01330	4.5e-59
CJAHOPNC_01331	1.2e-65	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_01332	4.6e-91				S	VanZ like family
CJAHOPNC_01333	8.9e-133	yebC			K	Transcriptional regulatory protein
CJAHOPNC_01334	8.4e-179	comGA			NU	Type II IV secretion system protein
CJAHOPNC_01335	1.7e-97	comGB			NU	type II secretion system
CJAHOPNC_01336	4.1e-19	comGB			NU	type II secretion system
CJAHOPNC_01337	3.7e-44	comGC			U	competence protein ComGC
CJAHOPNC_01338	2.1e-73
CJAHOPNC_01339	1e-41
CJAHOPNC_01340	8.9e-84	comGF			U	Putative Competence protein ComGF
CJAHOPNC_01341	5.1e-187	ytxK	2.1.1.72		L	N-6 DNA Methylase
CJAHOPNC_01342	7.2e-225	ackA	2.7.2.1		F	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CJAHOPNC_01344	7.9e-34				M	Protein of unknown function (DUF3737)
CJAHOPNC_01345	6.9e-31				M	Protein of unknown function (DUF3737)
CJAHOPNC_01346	1.1e-129	patB	4.4.1.8		E	Aminotransferase, class I
CJAHOPNC_01347	5e-72	patB	4.4.1.8		E	Aminotransferase, class I
CJAHOPNC_01348	1.7e-168	manA	5.3.1.8		G	mannose-6-phosphate isomerase
CJAHOPNC_01349	8.3e-61				S	SdpI/YhfL protein family
CJAHOPNC_01350	3.1e-130				K	Transcriptional regulatory protein, C terminal
CJAHOPNC_01351	6.3e-271	yclK	2.7.13.3		T	Histidine kinase
CJAHOPNC_01352	6.1e-199	asd	1.2.1.11		E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CJAHOPNC_01353	7.1e-217	aspC	2.6.1.1		E	Aminotransferase
CJAHOPNC_01354	2.4e-144	dapB	1.17.1.8		E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CJAHOPNC_01355	2.2e-176	dapA	4.3.3.7		E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CJAHOPNC_01356	2.1e-221	hipO	3.5.1.47		E	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
CJAHOPNC_01357	3.6e-78	dapD	2.3.1.117, 2.3.1.89		E	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
CJAHOPNC_01358	1.7e-251	lysA	4.1.1.19, 4.1.1.20		E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CJAHOPNC_01359	4.3e-236				L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_01360	2.8e-157	glcU			U	sugar transport
CJAHOPNC_01361	2.1e-64				L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_01362	1.6e-130				L	Transposase
CJAHOPNC_01363	4.2e-77				L	Resolvase, N terminal domain
CJAHOPNC_01364	1.8e-13	ytgB			S	Transglycosylase associated protein
CJAHOPNC_01365	1.5e-187	pdp	2.4.2.2, 2.4.2.4		F	pyrimidine-nucleoside phosphorylase
CJAHOPNC_01366	3.8e-78	fabZ	3.5.1.108, 4.2.1.59		I	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
CJAHOPNC_01367	9.6e-80	marR			K	Transcriptional regulator
CJAHOPNC_01368	1.3e-179	fabH	2.3.1.180		I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CJAHOPNC_01369	1.4e-34	acpP			IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CJAHOPNC_01370	1.5e-169	fabD	2.3.1.39		I	Malonyl CoA-acyl carrier protein transacylase
CJAHOPNC_01371	1.9e-127				IQ	reductase
CJAHOPNC_01372	1.6e-230	fabF	2.3.1.179		I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
CJAHOPNC_01373	3.1e-78	accB	2.3.1.12, 4.1.1.3		I	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
CJAHOPNC_01374	2.7e-73	fabZ	3.5.1.108, 4.2.1.59		I	FabA-like domain
CJAHOPNC_01375	2.5e-261	accC	6.3.4.14, 6.4.1.2		I	Acetyl-CoA carboxylase biotin carboxylase subunit
CJAHOPNC_01376	3.5e-157	accD	2.1.3.15, 6.4.1.2		I	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CJAHOPNC_01377	2e-143	accA	2.1.3.15, 6.4.1.2		I	alpha subunit
CJAHOPNC_01378	4.4e-135	fabI	1.3.1.10, 1.3.1.9		I	Enoyl- acyl-carrier-protein reductase NADH
CJAHOPNC_01379	1.8e-189	birA	6.3.4.15		H	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
CJAHOPNC_01380	1.8e-90	bioY			S	BioY family
CJAHOPNC_01381	1.5e-41	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_01382	4e-195				L	COG2826 Transposase and inactivated derivatives, IS30 family
CJAHOPNC_01383	6.6e-13				K	SIS domain
CJAHOPNC_01384	1.2e-49				K	SIS domain
CJAHOPNC_01385	4.7e-166	yufQ			S	Belongs to the binding-protein-dependent transport system permease family
CJAHOPNC_01386	2.6e-203	yufP			S	Belongs to the binding-protein-dependent transport system permease family
CJAHOPNC_01387	3.6e-285	xylG	3.6.3.17		S	ABC transporter
CJAHOPNC_01388	1.4e-190	tcsA			S	ABC transporter substrate-binding protein PnrA-like
CJAHOPNC_01389	2.7e-71	yeaL			S	Protein of unknown function (DUF441)
CJAHOPNC_01390	2.7e-10
CJAHOPNC_01391	1.2e-146	cbiQ			P	cobalt transport
CJAHOPNC_01392	0.0	ykoD			P	ABC transporter, ATP-binding protein
CJAHOPNC_01393	1.6e-94				S	UPF0397 protein
CJAHOPNC_01394	1.7e-66				S	Domain of unknown function DUF1828
CJAHOPNC_01395	1.6e-16
CJAHOPNC_01396	1.6e-52
CJAHOPNC_01397	2.6e-180	citR			K	Putative sugar-binding domain
CJAHOPNC_01398	6.9e-248	yjjP			S	Putative threonine/serine exporter
CJAHOPNC_01399	5.5e-97	yxkA			S	Phosphatidylethanolamine-binding protein
CJAHOPNC_01400	4.6e-35				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_01401	4.1e-59	cls			I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJAHOPNC_01402	5.7e-36	cls			I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJAHOPNC_01403	4.2e-152	metAA	2.3.1.46		E	Transfers an acetyl group from acetyl-CoA to
CJAHOPNC_01404	8.3e-33	cysK	2.5.1.47		E	Belongs to the cysteine synthase cystathionine beta- synthase family
CJAHOPNC_01405	2.4e-124	cysK	2.5.1.47		E	Belongs to the cysteine synthase cystathionine beta- synthase family
CJAHOPNC_01406	3.7e-96	apt	2.4.2.22, 2.4.2.7		F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CJAHOPNC_01407	1e-47	recJ			L	Single-stranded-DNA-specific exonuclease RecJ
CJAHOPNC_01408	0.0	recJ			L	Single-stranded-DNA-specific exonuclease RecJ
CJAHOPNC_01409	2.1e-120	srtA	3.4.22.70		M	sortase family
CJAHOPNC_01410	0.0	lepA			M	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CJAHOPNC_01411	3.8e-15
CJAHOPNC_01412	1.8e-24				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_01413	2.6e-203	dnaJ			O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CJAHOPNC_01414	0.0	dnaK			O	Heat shock 70 kDa protein
CJAHOPNC_01415	7e-76	grpE			O	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CJAHOPNC_01416	1.2e-191	hrcA			K	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CJAHOPNC_01417	5.6e-183	ribF	2.7.1.26, 2.7.7.2		H	Belongs to the ribF family
CJAHOPNC_01418	8.8e-167	truB	5.4.99.25		J	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CJAHOPNC_01419	4.3e-59	rbfA			J	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CJAHOPNC_01420	0.0	infB			J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CJAHOPNC_01421	1.2e-46	rplGA			J	ribosomal protein
CJAHOPNC_01422	8.8e-47	ylxR			K	Protein of unknown function (DUF448)
CJAHOPNC_01423	2.8e-197	nusA			K	Participates in both transcription termination and antitermination
CJAHOPNC_01424	4.1e-40	rimP			J	Required for maturation of 30S ribosomal subunits
CJAHOPNC_01425	0.0	polC	2.7.7.7		L	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CJAHOPNC_01426	0.0	proS	6.1.1.15		J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CJAHOPNC_01427	7.5e-196	rseP	3.4.21.107, 3.4.21.116		M	zinc metalloprotease
CJAHOPNC_01428	1.6e-146	cdsA	2.7.7.41		I	Belongs to the CDS family
CJAHOPNC_01429	1.4e-138	uppS	2.5.1.31		H	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CJAHOPNC_01430	4e-93	frr			J	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CJAHOPNC_01431	2.8e-131	pyrH	2.7.4.22		F	Catalyzes the reversible phosphorylation of UMP to UDP
CJAHOPNC_01432	2.2e-185	tsf			J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CJAHOPNC_01433	4.2e-141	rpsB			J	Belongs to the universal ribosomal protein uS2 family
CJAHOPNC_01434	2.4e-200	yabB	2.1.1.223		L	Methyltransferase small domain
CJAHOPNC_01435	1.1e-115	plsC	2.3.1.51		I	Acyltransferase
CJAHOPNC_01436	1.4e-231	cfa	2.1.1.317, 2.1.1.79		M	cyclopropane-fatty-acyl-phospholipid synthase
CJAHOPNC_01437	0.0	pepO	3.4.24.71		O	Peptidase family M13
CJAHOPNC_01438	8.3e-236	mdlB			V	ABC transporter
CJAHOPNC_01439	1e-122	pilD	3.4.23.43		NOU	Bacterial Peptidase A24 N-terminal domain
CJAHOPNC_01440	7.8e-70	rpsL			J	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CJAHOPNC_01441	6e-82	rpsG			J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CJAHOPNC_01442	0.0	fusA			J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CJAHOPNC_01443	4.4e-49	rpsJ			J	Involved in the binding of tRNA to the ribosomes
CJAHOPNC_01444	6.9e-113	rplC			J	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CJAHOPNC_01445	2.3e-105	rplD			J	Forms part of the polypeptide exit tunnel
CJAHOPNC_01446	4.1e-47	rplW			J	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CJAHOPNC_01447	8e-154	rplB			J	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CJAHOPNC_01448	4.2e-46	rpsS			J	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CJAHOPNC_01449	4e-54	rplV			J	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CJAHOPNC_01450	6.6e-106	rpsC			J	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CJAHOPNC_01451	2.1e-76	rplP			J	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CJAHOPNC_01452	2.2e-25	rpmC			J	Belongs to the universal ribosomal protein uL29 family
CJAHOPNC_01453	1.5e-40	rpsQ			J	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CJAHOPNC_01454	8.7e-60	rplN			J	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CJAHOPNC_01455	4.4e-33	rplX			J	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CJAHOPNC_01456	1.6e-94	rplE			J	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CJAHOPNC_01457	8.9e-29	rpsN			J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CJAHOPNC_01458	7.2e-68	rpsH			J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CJAHOPNC_01459	9.5e-92	rplF			J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CJAHOPNC_01460	2.2e-55	rplR			J	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CJAHOPNC_01461	1.8e-84	rpsE			J	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CJAHOPNC_01462	2.3e-24	rpmD			J	Ribosomal protein L30
CJAHOPNC_01463	1.5e-71	rplO			J	Binds to the 23S rRNA
CJAHOPNC_01464	4e-237	secY			U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CJAHOPNC_01465	2.7e-120	adk	2.7.4.3		F	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CJAHOPNC_01466	8.4e-34	infA			J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CJAHOPNC_01467	6.6e-14	rpmJ			J	Belongs to the bacterial ribosomal protein bL36 family
CJAHOPNC_01468	4.2e-56	rpsM			J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CJAHOPNC_01469	3e-63	rpsK			J	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CJAHOPNC_01470	5.3e-170	rpoA	2.7.7.6		K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CJAHOPNC_01471	1.1e-60	rplQ			J	Ribosomal protein L17
CJAHOPNC_01472	2.2e-154	ecfA1			P	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CJAHOPNC_01473	1.5e-152	ecfA	3.6.3.55		P	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CJAHOPNC_01474	2.6e-141	ecfT			U	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CJAHOPNC_01475	4.6e-151	truA	5.4.99.12		J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CJAHOPNC_01476	4.5e-79	rplM			J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CJAHOPNC_01477	1.6e-67	rpsI			J	Belongs to the universal ribosomal protein uS9 family
CJAHOPNC_01478	1.9e-197				L	Phage integrase family
CJAHOPNC_01479	1.6e-25
CJAHOPNC_01480	1.3e-159	repB			EP	Plasmid replication protein
CJAHOPNC_01481	3.5e-11
CJAHOPNC_01482	2.5e-70				D	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
CJAHOPNC_01483	4e-18
CJAHOPNC_01485	0.0				V	Type II restriction enzyme, methylase subunits
CJAHOPNC_01486	1.9e-48				K	Putative DNA-binding domain
CJAHOPNC_01487	7.1e-62				S	Protein of unknown function (DUF805)
CJAHOPNC_01488	1.1e-109	thiJ	2.7.11.1, 3.5.1.124		S	DJ-1/PfpI family
CJAHOPNC_01489	3.4e-65		3.1.3.18, 3.8.1.2		S	Haloacid dehalogenase-like hydrolase
CJAHOPNC_01490	9.8e-14		3.1.3.18, 3.8.1.2		S	Haloacid dehalogenase-like hydrolase
CJAHOPNC_01491	2.7e-132				S	membrane transporter protein
CJAHOPNC_01492	4e-127	pgm3			G	Belongs to the phosphoglycerate mutase family
CJAHOPNC_01493	1.2e-163	czcD			P	cation diffusion facilitator family transporter
CJAHOPNC_01494	2.5e-23
CJAHOPNC_01495	2.6e-126	gpmA	5.4.2.11		G	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CJAHOPNC_01496	4.9e-184				S	AAA domain
CJAHOPNC_01497	3.3e-49				E	Amino acid permease
CJAHOPNC_01498	2.2e-163				E	Amino acid permease
CJAHOPNC_01499	1.5e-16				E	Amino acid permease
CJAHOPNC_01500	2.2e-184				D	Alpha beta
CJAHOPNC_01501	4.3e-61		3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
CJAHOPNC_01502	2.2e-39		3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
CJAHOPNC_01503	3e-167		3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
CJAHOPNC_01504	0.0	bglP			G	phosphotransferase system
CJAHOPNC_01505	3e-63	licT			K	CAT RNA binding domain
CJAHOPNC_01506	4.6e-64	licT			K	CAT RNA binding domain
CJAHOPNC_01507	7.8e-216	glxK	2.7.1.165		G	Belongs to the glycerate kinase type-1 family
CJAHOPNC_01508	1.5e-85	ptpA	3.1.3.48		T	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CJAHOPNC_01509	3.3e-116
CJAHOPNC_01510	2.2e-148				S	Sucrose-6F-phosphate phosphohydrolase
CJAHOPNC_01511	1.1e-150				S	hydrolase
CJAHOPNC_01512	1.3e-257	glmM	5.4.2.10		G	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CJAHOPNC_01513	2.4e-170	ybbR			S	YbbR-like protein
CJAHOPNC_01514	9.3e-150	dacA	2.7.7.85		S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CJAHOPNC_01515	5.6e-208	potD			P	ABC transporter
CJAHOPNC_01516	5.5e-131	potC			P	ABC transporter permease
CJAHOPNC_01517	3.6e-127	potB			P	ABC transporter permease
CJAHOPNC_01518	4.6e-103	potA	3.6.3.30, 3.6.3.31		P	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CJAHOPNC_01519	2.7e-88	potA	3.6.3.30, 3.6.3.31		P	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CJAHOPNC_01520	1.1e-164	murB	1.3.1.98		M	Cell wall formation
CJAHOPNC_01521	2.3e-98	dnaQ	2.7.7.7		L	DNA polymerase III
CJAHOPNC_01522	6.4e-90	ydiB	2.7.1.221, 5.1.1.1		O	Hydrolase, P-loop family
CJAHOPNC_01523	1.8e-181	pta	2.3.1.8, 3.6.3.21		C	phosphate acetyltransferase
CJAHOPNC_01524	1.3e-136	ung	3.2.2.27		L	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CJAHOPNC_01525	1.9e-158	ycsE			S	Sucrose-6F-phosphate phosphohydrolase
CJAHOPNC_01526	4.8e-96
CJAHOPNC_01527	2e-143	tpiA	2.7.2.3, 5.3.1.1		G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CJAHOPNC_01528	2.1e-227	pgk	2.7.2.3, 5.3.1.1		F	Belongs to the phosphoglycerate kinase family
CJAHOPNC_01529	1.3e-190	gap	1.2.1.12		G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CJAHOPNC_01530	1.6e-188	cggR			K	Putative sugar-binding domain
CJAHOPNC_01531	4.2e-205				S	SLAP domain
CJAHOPNC_01532	3.9e-176	prs	2.7.6.1		F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CJAHOPNC_01533	3.2e-55		2.7.1.2		GK	ROK family
CJAHOPNC_01534	2.8e-68				GK	ROK family
CJAHOPNC_01535	5.5e-43
CJAHOPNC_01536	1.2e-268	ywfO			S	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJAHOPNC_01537	5.5e-68				S	Domain of unknown function (DUF1934)
CJAHOPNC_01538	3.3e-55	rpoE			K	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CJAHOPNC_01539	0.0	pyrG	6.3.4.2		F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CJAHOPNC_01540	1.3e-246	murA	2.5.1.7		M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CJAHOPNC_01541	3.2e-33				S	Haloacid dehalogenase-like hydrolase
CJAHOPNC_01542	1.7e-48				S	Haloacid dehalogenase-like hydrolase
CJAHOPNC_01543	6.3e-284	pipD			E	Dipeptidase
CJAHOPNC_01544	3.7e-159	msmR			K	AraC-like ligand binding domain
CJAHOPNC_01545	2.3e-224	pbuX			F	xanthine permease
CJAHOPNC_01546	4.8e-105	xpt	2.4.2.22, 2.4.2.7		F	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CJAHOPNC_01547	5e-105				K	DNA-binding helix-turn-helix protein
CJAHOPNC_01548	1.8e-173				L	transposase, IS605 OrfB family
CJAHOPNC_01551	1.2e-304	guaA	2.3.1.128, 6.3.5.2		F	Catalyzes the synthesis of GMP from XMP
CJAHOPNC_01552	8.1e-80				L	Transposase and inactivated derivatives, IS30 family
CJAHOPNC_01553	5.6e-161	prsA	5.2.1.8		M	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CJAHOPNC_01554	7.4e-117
CJAHOPNC_01555	2.6e-49	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_01556	5e-90	isp2			L	PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CJAHOPNC_01557	1.1e-37
CJAHOPNC_01558	1.4e-47				C	nitroreductase
CJAHOPNC_01559	1.1e-240	yhdP			S	Transporter associated domain
CJAHOPNC_01560	2.4e-101	hpt	2.4.2.8		F	Belongs to the purine pyrimidine phosphoribosyltransferase family
CJAHOPNC_01561	1.5e-231	potE			E	amino acid
CJAHOPNC_01562	5.2e-130				M	Glycosyl hydrolases family 25
CJAHOPNC_01563	3.7e-208	yfmL	3.6.4.13		L	DEAD DEAH box helicase
CJAHOPNC_01564	6.4e-246	celB			G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CJAHOPNC_01566	1.2e-25
CJAHOPNC_01567	1e-215	mnaA	5.1.3.14		G	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CJAHOPNC_01568	3.1e-90	gtcA			S	Teichoic acid glycosylation protein
CJAHOPNC_01569	1.6e-79	fld			C	Flavodoxin
CJAHOPNC_01570	1.7e-164	map	3.4.11.18		E	Methionine Aminopeptidase
CJAHOPNC_01571	2.2e-152	yihY			S	Belongs to the UPF0761 family
CJAHOPNC_01572	4.7e-168	galU	2.7.7.9		M	UTP-glucose-1-phosphate uridylyltransferase
CJAHOPNC_01573	5.3e-206	pbpX1			V	Beta-lactamase
CJAHOPNC_01574	8.4e-107		3.6.1.55		F	NUDIX domain
CJAHOPNC_01575	1.3e-301				I	Protein of unknown function (DUF2974)
CJAHOPNC_01576	2.3e-17				C	FMN_bind
CJAHOPNC_01577	1e-82
CJAHOPNC_01578	2e-177	iunH	3.2.2.1		F	inosine-uridine preferring nucleoside hydrolase
CJAHOPNC_01579	4.5e-174				S	Aldo keto reductase
CJAHOPNC_01580	2.5e-130
CJAHOPNC_01581	5e-133	gpmA	5.4.2.11		G	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CJAHOPNC_01582	2.8e-108	pcp	3.4.19.3		O	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CJAHOPNC_01583	9.4e-95				G	Aldose 1-epimerase
CJAHOPNC_01584	4.7e-202	brpA			K	Cell envelope-like function transcriptional attenuator common domain protein
CJAHOPNC_01585	8.1e-108	plsY	2.3.1.15		I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CJAHOPNC_01586	0.0	XK27_08315			M	Sulfatase
CJAHOPNC_01587	4.4e-21				S	RelB antitoxin
CJAHOPNC_01588	1e-113	pyrE	2.4.2.10, 4.1.1.23		F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CJAHOPNC_01589	5.4e-127	pyrF	4.1.1.23		F	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CJAHOPNC_01590	1.8e-53	pyrD	1.3.1.14, 1.3.98.1		F	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CJAHOPNC_01591	1.1e-90	pyrD	1.3.1.14, 1.3.98.1		F	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CJAHOPNC_01592	6.1e-94	pyrR	2.4.2.9		F	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CJAHOPNC_01593	4.7e-182	pyrB	2.1.3.2		F	Belongs to the ATCase OTCase family
CJAHOPNC_01594	7.2e-247	pyrC	3.5.2.3		F	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CJAHOPNC_01595	1.4e-74	carA	6.3.5.5		F	Carbamoyl-phosphate synthetase glutamine chain
CJAHOPNC_01596	1.7e-119	carA	6.3.5.5		F	Carbamoyl-phosphate synthetase glutamine chain
CJAHOPNC_01597	9.7e-275	carB	6.3.5.5		F	Carbamoyl-phosphate synthase
CJAHOPNC_01598	0.0	carB	6.3.5.5		F	Carbamoyl-phosphate synthase
CJAHOPNC_01599	1.8e-41				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_01600	1.7e-43
CJAHOPNC_01602	2.1e-118	glcU			U	sugar transport
CJAHOPNC_01603	2e-48
CJAHOPNC_01604	2.5e-79	msrB	1.8.4.11, 1.8.4.12		O	peptide methionine sulfoxide reductase
CJAHOPNC_01605	0.0	pepX	3.4.14.11		E	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CJAHOPNC_01606	1.7e-21
CJAHOPNC_01607	3e-65	arsC	1.20.4.1		P	Belongs to the ArsC family
CJAHOPNC_01608	2.2e-178				I	Carboxylesterase family
CJAHOPNC_01610	6.5e-213				M	Glycosyl hydrolases family 25
CJAHOPNC_01611	3.4e-291				S	Predicted membrane protein (DUF2207)
CJAHOPNC_01612	7.4e-16				S	Predicted membrane protein (DUF2207)
CJAHOPNC_01613	2.1e-27	dmpI	5.3.2.6		G	Belongs to the 4-oxalocrotonate tautomerase family
CJAHOPNC_01614	2.5e-129				S	Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
CJAHOPNC_01615	1.8e-200	ilvE	2.6.1.42		E	Branched-chain amino acid aminotransferase
CJAHOPNC_01616	1.3e-257				S	Uncharacterized protein conserved in bacteria (DUF2325)
CJAHOPNC_01617	4.5e-49	rplU			J	This protein binds to 23S rRNA in the presence of protein L20
CJAHOPNC_01618	2.3e-47	rpmA			J	Belongs to the bacterial ribosomal protein bL27 family
CJAHOPNC_01619	2e-200	pepP	3.4.11.9, 3.4.13.9		E	Creatinase/Prolidase N-terminal domain
CJAHOPNC_01620	2.2e-102	efp			J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CJAHOPNC_01621	1.6e-70	yqhY			S	Asp23 family, cell envelope-related function
CJAHOPNC_01622	8.1e-64	nusB			K	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CJAHOPNC_01623	1.8e-156	folD	1.5.1.5, 3.5.4.9		F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CJAHOPNC_01624	2.2e-193	xseA	3.1.11.6		L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CJAHOPNC_01625	7.5e-36	xseB	3.1.11.6		L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CJAHOPNC_01626	9.2e-161	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90		H	Belongs to the FPP GGPP synthase family
CJAHOPNC_01627	6e-154	rrmJ	2.1.1.226, 2.1.1.227		J	Ribosomal RNA large subunit methyltransferase J
CJAHOPNC_01628	2.5e-308	recN			L	May be involved in recombinational repair of damaged DNA
CJAHOPNC_01629	3.5e-21		6.3.3.2		S	ASCH
CJAHOPNC_01630	8.1e-44		6.3.3.2		S	ASCH
CJAHOPNC_01631	1.9e-112	gmk	2.7.4.8, 4.1.1.23		F	Essential for recycling GMP and indirectly, cGMP
CJAHOPNC_01632	6.5e-34	rpoZ	2.7.7.6		K	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CJAHOPNC_01633	0.0	priA			L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CJAHOPNC_01634	2.7e-174	fmt	2.1.2.9		J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CJAHOPNC_01635	2e-247	sun	2.1.1.176		J	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CJAHOPNC_01636	9.2e-147	stp	3.1.3.16		T	phosphatase
CJAHOPNC_01637	0.0	prkC	2.7.11.1		KLT	serine threonine protein kinase
CJAHOPNC_01638	2.6e-166	rsgA	3.1.3.100		S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CJAHOPNC_01639	2.9e-119	rpe	5.1.3.1		G	Belongs to the ribulose-phosphate 3-epimerase family
CJAHOPNC_01640	1.4e-127	thiN	2.7.6.2		H	thiamine pyrophosphokinase
CJAHOPNC_01641	1e-50
CJAHOPNC_01642	1.1e-26	rpmB			J	Belongs to the bacterial ribosomal protein bL28 family
CJAHOPNC_01643	6.8e-57	asp			S	Asp23 family, cell envelope-related function
CJAHOPNC_01644	2e-305	yloV			S	DAK2 domain fusion protein YloV
CJAHOPNC_01645	0.0	recG	3.6.4.12		L	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CJAHOPNC_01646	9.9e-183	plsX	2.3.1.15		I	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CJAHOPNC_01647	7.5e-36	acpP			IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CJAHOPNC_01648	8e-196	oppD			P	Belongs to the ABC transporter superfamily
CJAHOPNC_01649	8.2e-182	oppF			P	Belongs to the ABC transporter superfamily
CJAHOPNC_01650	1.7e-176	oppB			P	ABC transporter permease
CJAHOPNC_01651	6.6e-149	oppC			P	Binding-protein-dependent transport system inner membrane component
CJAHOPNC_01652	0.0	oppA			E	ABC transporter substrate-binding protein
CJAHOPNC_01653	2.1e-193	oppA			E	ABC transporter substrate-binding protein
CJAHOPNC_01654	3.6e-90	oppA			E	ABC transporter substrate-binding protein
CJAHOPNC_01655	1.3e-125	rnc	3.1.26.3		J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CJAHOPNC_01656	0.0	smc			D	Required for chromosome condensation and partitioning
CJAHOPNC_01657	2.8e-166	ftsY			U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CJAHOPNC_01658	8.8e-186	pipD			E	Dipeptidase
CJAHOPNC_01659	2e-79	pipD			E	Dipeptidase
CJAHOPNC_01660	5.2e-44
CJAHOPNC_01661	3.3e-245	yfnA			E	amino acid
CJAHOPNC_01662	9.4e-68	yslB			S	Protein of unknown function (DUF2507)
CJAHOPNC_01663	1.8e-147	murI	3.6.1.66, 5.1.1.3		M	Provides the (R)-glutamate required for cell wall biosynthesis
CJAHOPNC_01664	2.7e-114	rdgB	3.6.1.66, 5.1.1.3		F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CJAHOPNC_01665	1e-34				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_01666	4.8e-27
CJAHOPNC_01667	0.0	XK27_06780			V	ABC transporter permease
CJAHOPNC_01668	5.8e-118	XK27_06785			V	ABC transporter, ATP-binding protein
CJAHOPNC_01669	8.7e-213	pts13C			G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CJAHOPNC_01670	2e-160				S	Alpha/beta hydrolase of unknown function (DUF915)
CJAHOPNC_01671	0.0	clpE			O	AAA domain (Cdc48 subfamily)
CJAHOPNC_01672	4.9e-119	lepB	3.4.21.89		U	Belongs to the peptidase S26 family
CJAHOPNC_01673	2.4e-128
CJAHOPNC_01674	1.1e-221	cycA			E	Amino acid permease
CJAHOPNC_01675	2e-178	yifK			E	Amino acid permease
CJAHOPNC_01676	3.6e-49	yifK			E	Amino acid permease
CJAHOPNC_01677	3.6e-35	rpsR			J	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CJAHOPNC_01678	3.1e-79	ssb			L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CJAHOPNC_01679	4.2e-49	rpsF			J	Binds together with S18 to 16S ribosomal RNA
CJAHOPNC_01680	0.0	gyrA	5.99.1.3		L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CJAHOPNC_01681	0.0	gyrB	5.99.1.3		L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CJAHOPNC_01682	1.1e-209	recF			L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CJAHOPNC_01683	1.3e-34	yaaA			S	S4 domain protein YaaA
CJAHOPNC_01684	3.9e-196	dnaN	2.7.7.7		L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CJAHOPNC_01685	6.8e-259	dnaA			L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CJAHOPNC_01686	1.1e-15	rpmH			J	Belongs to the bacterial ribosomal protein bL34 family
CJAHOPNC_01687	1e-60	rnpA	3.1.26.5		J	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CJAHOPNC_01688	6.4e-146	yidC			U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CJAHOPNC_01689	5.6e-253	mnmE			S	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CJAHOPNC_01690	0.0	gidA			D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CJAHOPNC_01691	2.2e-273	gnd	1.1.1.343, 1.1.1.44		H	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CJAHOPNC_01692	8.4e-290	clcA			P	chloride
CJAHOPNC_01693	1.7e-212
CJAHOPNC_01694	1.2e-18
CJAHOPNC_01695	3.4e-156				EGP	Sugar (and other) transporter
CJAHOPNC_01696	2.2e-36				EGP	Sugar (and other) transporter
CJAHOPNC_01697	0.0	copA	3.6.3.54		P	P-type ATPase
CJAHOPNC_01698	1.4e-49	silP	1.9.3.1, 3.6.3.54		S	Cupredoxin-like domain
CJAHOPNC_01699	1.2e-64	silP	1.9.3.1, 3.6.3.54		S	Cupredoxin-like domain
CJAHOPNC_01700	6e-76	atkY			K	Penicillinase repressor
CJAHOPNC_01701	2.3e-35
CJAHOPNC_01702	1.3e-222	pbuG			S	permease
CJAHOPNC_01703	6e-49				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_01704	1.8e-240	amtB			P	ammonium transporter
CJAHOPNC_01705	3.9e-44				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_01706	1.9e-68				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_01707	2.3e-74				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_01708	2.7e-75
CJAHOPNC_01709	2.2e-311	cpdB	3.1.3.6, 3.1.4.16		F	Belongs to the 5'-nucleotidase family
CJAHOPNC_01710	7.6e-28	rpmF			J	Belongs to the bacterial ribosomal protein bL32 family
CJAHOPNC_01711	6.2e-33	yrvD			S	Lipopolysaccharide assembly protein A domain
CJAHOPNC_01712	1.4e-144	XK27_05435	1.1.1.100		S	Belongs to the short-chain dehydrogenases reductases (SDR) family
CJAHOPNC_01713	6.8e-178	rnz	3.1.26.11		J	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CJAHOPNC_01714	0.0	oatA			I	Acyltransferase
CJAHOPNC_01715	1.4e-242	obg			S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CJAHOPNC_01716	0.0	uvrC			L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CJAHOPNC_01717	2.1e-177	ade	3.5.4.2		F	Adenine deaminase C-terminal domain
CJAHOPNC_01718	7e-44
CJAHOPNC_01719	2.2e-19				S	Aldo keto reductase
CJAHOPNC_01720	9.9e-91				S	Aldo keto reductase
CJAHOPNC_01722	0.0	thrS	6.1.1.3		J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CJAHOPNC_01723	4e-167	dnaI			L	Primosomal protein DnaI
CJAHOPNC_01724	1.4e-248	dnaB			L	Replication initiation and membrane attachment
CJAHOPNC_01725	4.1e-83	nrdR			K	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CJAHOPNC_01726	4.5e-106	coaE	2.7.1.24		F	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CJAHOPNC_01727	5.3e-158	fpg	3.2.2.23, 4.2.99.18		L	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CJAHOPNC_01728	0.0	polA	2.7.7.7		L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CJAHOPNC_01729	1.6e-12
CJAHOPNC_01732	9.2e-09				S	Hypothetical protein (DUF2513)
CJAHOPNC_01733	1.7e-57				V	Type II restriction enzyme, methylase subunits
CJAHOPNC_01734	6.8e-63				V	Type II restriction enzyme, methylase subunits
CJAHOPNC_01735	3.5e-104				V	Type II restriction enzyme, methylase subunits
CJAHOPNC_01736	1.1e-88				V	Type II restriction enzyme, methylase subunits
CJAHOPNC_01738	3.7e-08
CJAHOPNC_01740	2.7e-112	hsdS	3.1.21.3		V	Type I restriction modification DNA specificity domain
CJAHOPNC_01741	9.8e-288	hsdM	2.1.1.72		V	type I restriction-modification system
CJAHOPNC_01742	0.0	hsdR	3.1.21.3		L	Type I restriction enzyme R protein N terminus (HSDR_N)
CJAHOPNC_01743	4.4e-149	hsdS2	2.1.1.72		L	N-6 DNA Methylase
CJAHOPNC_01744	3.5e-79	hipB			K	Helix-turn-helix
CJAHOPNC_01745	1.2e-263	gabD	1.2.1.16, 1.2.1.20, 1.2.1.79		C	Belongs to the aldehyde dehydrogenase family
CJAHOPNC_01746	1.4e-155
CJAHOPNC_01747	0.0	ydgH			S	MMPL family
CJAHOPNC_01748	6.6e-99	yobS			K	Bacterial regulatory proteins, tetR family
CJAHOPNC_01749	2.1e-158		3.5.2.6		V	Beta-lactamase enzyme family
CJAHOPNC_01750	7.4e-161	corA			P	CorA-like Mg2+ transporter protein
CJAHOPNC_01751	6.3e-238				G	Bacterial extracellular solute-binding protein
CJAHOPNC_01752	2.1e-254	YSH1			S	Zn-dependent metallo-hydrolase RNA specificity domain
CJAHOPNC_01753	2.3e-145	gtsC			P	Binding-protein-dependent transport system inner membrane component
CJAHOPNC_01754	1.9e-158	gtsB			P	ABC-type sugar transport systems, permease components
CJAHOPNC_01755	1.9e-203	malK			P	ATPases associated with a variety of cellular activities
CJAHOPNC_01756	1.1e-280	pipD			E	Dipeptidase
CJAHOPNC_01757	8.5e-159	endA			F	DNA RNA non-specific endonuclease
CJAHOPNC_01758	2e-164	dnaQ	2.7.7.7		L	EXOIII
CJAHOPNC_01759	2.8e-159				K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CJAHOPNC_01760	2.3e-28	pckA	4.1.1.49		H	Phosphoenolpyruvate carboxykinase
CJAHOPNC_01761	8.6e-105	pckA	4.1.1.49		H	Phosphoenolpyruvate carboxykinase
CJAHOPNC_01762	2.4e-95	pckA	4.1.1.49		H	Phosphoenolpyruvate carboxykinase
CJAHOPNC_01763	3e-64	apfA	2.7.7.72, 3.6.1.61		F	Nudix hydrolase
CJAHOPNC_01764	2.9e-37
CJAHOPNC_01765	1.5e-52		4.1.1.44		S	Carboxymuconolactone decarboxylase family
CJAHOPNC_01766	6.4e-40		4.1.1.44		S	Carboxymuconolactone decarboxylase family
CJAHOPNC_01767	6.8e-223	ackA	2.7.2.1		F	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CJAHOPNC_01768	8.2e-71				S	LPXTG cell wall anchor motif
CJAHOPNC_01769	1.1e-73				UW	LPXTG-motif cell wall anchor domain protein
CJAHOPNC_01770	1.1e-47
CJAHOPNC_01771	2.2e-45	yagE			E	amino acid
CJAHOPNC_01772	2.3e-37	yagE			E	amino acid
CJAHOPNC_01773	1.7e-45
CJAHOPNC_01774	0.0	glmS	2.6.1.16		M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CJAHOPNC_01775	0.0	adhE	1.1.1.1, 1.2.1.10		C	belongs to the iron- containing alcohol dehydrogenase family
CJAHOPNC_01776	5.8e-242	cycA			E	Amino acid permease
CJAHOPNC_01777	1.3e-51	maa			S	transferase hexapeptide repeat
CJAHOPNC_01778	4e-10	maa			S	transferase hexapeptide repeat
CJAHOPNC_01779	9.1e-64				K	Transcriptional regulator
CJAHOPNC_01780	1.2e-64				K	Transcriptional regulator
CJAHOPNC_01781	2.9e-63	manO			S	Domain of unknown function (DUF956)
CJAHOPNC_01782	1.2e-174	manN			G	system, mannose fructose sorbose family IID component
CJAHOPNC_01783	1.4e-134	manY			G	PTS system
CJAHOPNC_01784	3.6e-188	manL	2.7.1.191		G	PTS system sorbose subfamily IIB component
CJAHOPNC_01785	1.8e-16	rafA	3.2.1.22		G	alpha-galactosidase
CJAHOPNC_01786	0.0	clpE			O	Belongs to the ClpA ClpB family
CJAHOPNC_01787	3.9e-44	XK27_09445			S	Domain of unknown function (DUF1827)
CJAHOPNC_01788	3.2e-305	prfC			J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CJAHOPNC_01789	4.6e-160	hlyX			S	Transporter associated domain
CJAHOPNC_01790	1.3e-73
CJAHOPNC_01791	1.9e-86
CJAHOPNC_01792	6e-146	recX	2.4.1.337	GT4	S	Regulatory protein RecX
CJAHOPNC_01793	3.9e-262	rumA	2.1.1.190, 2.1.1.35		J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CJAHOPNC_01794	1.1e-112				L	COG3385 FOG Transposase and inactivated derivatives
CJAHOPNC_01795	1.3e-54				L	COG3385 FOG Transposase and inactivated derivatives
CJAHOPNC_01796	2.5e-40				L	COG3385 FOG Transposase and inactivated derivatives
CJAHOPNC_01797	2.1e-37				L	transposase, IS605 OrfB family
CJAHOPNC_01798	3.3e-10	merA	1.16.1.1, 1.8.1.7		C	Pyridine nucleotide-disulfide oxidoreductase
CJAHOPNC_01799	1.6e-249				N	Uncharacterized conserved protein (DUF2075)
CJAHOPNC_01800	2.1e-34	mmuP			E	amino acid
CJAHOPNC_01801	1.6e-129	mmuP			E	amino acid
CJAHOPNC_01802	1.8e-30	mmuP			E	amino acid
CJAHOPNC_01803	4.2e-36	mmuM	1.5.1.20, 2.1.1.10		H	homocysteine S-methyltransferase
CJAHOPNC_01804	1.6e-25	mmuM	1.5.1.20, 2.1.1.10		H	homocysteine S-methyltransferase
CJAHOPNC_01805	5.6e-49	mmuM	1.5.1.20, 2.1.1.10		H	homocysteine S-methyltransferase
CJAHOPNC_01806	9.2e-65	amd	3.5.1.47		E	Peptidase family M20/M25/M40
CJAHOPNC_01807	2.4e-81				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_01808	6.2e-277				V	ABC-type multidrug transport system, ATPase and permease components
CJAHOPNC_01809	3.2e-226				V	ABC-type multidrug transport system, ATPase and permease components
CJAHOPNC_01810	4.7e-63	yodB			K	Transcriptional regulator, HxlR family
CJAHOPNC_01811	1.4e-203	pheS	6.1.1.20		J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CJAHOPNC_01812	0.0	pheT	6.1.1.20		J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CJAHOPNC_01813	1.4e-62	greA			K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CJAHOPNC_01814	8.7e-170	ldh	1.1.1.27		C	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CJAHOPNC_01815	6.8e-59				S	Phage derived protein Gp49-like (DUF891)
CJAHOPNC_01816	2.4e-38				K	Helix-turn-helix domain
CJAHOPNC_01817	1e-170		2.7.1.59		G	BadF/BadG/BcrA/BcrD ATPase family
CJAHOPNC_01818	0.0				S	membrane
CJAHOPNC_01819	0.0	pbp2b	3.4.16.4		M	Penicillin-binding Protein
CJAHOPNC_01820	1.2e-20	rpmG			J	Belongs to the bacterial ribosomal protein bL33 family
CJAHOPNC_01821	1.7e-99	ygfA	6.3.3.2		H	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CJAHOPNC_01822	7.5e-118	gluP	3.4.21.105		S	Rhomboid family
CJAHOPNC_01823	5.6e-33	yqgQ			S	Bacterial protein of unknown function (DUF910)
CJAHOPNC_01824	1.7e-69	yqhL			P	Rhodanese-like protein
CJAHOPNC_01825	3.2e-172	miaA	2.5.1.75		F	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CJAHOPNC_01826	1.2e-102	cas2	2.7.7.7		L	CRISPR-associated protein (Cas_Cas2CT1978)
CJAHOPNC_01827	9.4e-143	cas1			L	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CJAHOPNC_01828	2.7e-88	casE			S	CRISPR_assoc
CJAHOPNC_01829	1.3e-91	casD			S	CRISPR-associated protein (Cas_Cas5)
CJAHOPNC_01830	5.5e-158	casC			L	CT1975-like protein
CJAHOPNC_01831	4.8e-66	casB			S	CRISPR-associated protein Cse2 (CRISPR_cse2)
CJAHOPNC_01832	1.4e-221	casA			L	the current gene model (or a revised gene model) may contain a frame shift
CJAHOPNC_01833	1.1e-150
CJAHOPNC_01834	6.4e-290	citF	2.8.3.10		H	Citrate (pro-3S)-lyase alpha chain
CJAHOPNC_01835	8.2e-168	citE	4.1.3.25, 4.1.3.34		G	Belongs to the HpcH HpaI aldolase family
CJAHOPNC_01836	9.1e-44	citD			C	Covalent carrier of the coenzyme of citrate lyase
CJAHOPNC_01837	3.3e-197	citC	6.2.1.22		H	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CJAHOPNC_01838	4e-155	ydjP			I	Alpha/beta hydrolase family
CJAHOPNC_01839	4e-273				P	Sodium:sulfate symporter transmembrane region
CJAHOPNC_01840	5.6e-10
CJAHOPNC_01842	7.5e-20				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_01843	6.1e-23
CJAHOPNC_01844	3e-170	mccA	2.5.1.134, 2.5.1.47		E	Belongs to the cysteine synthase cystathionine beta- synthase family
CJAHOPNC_01845	7.7e-219	metC	4.4.1.1, 4.4.1.2, 4.4.1.8		E	cystathionine
CJAHOPNC_01846	3.3e-95	cysE	2.3.1.30		E	Bacterial transferase hexapeptide (six repeats)
CJAHOPNC_01847	9.8e-18				IQ	reductase
CJAHOPNC_01848	5.6e-56
CJAHOPNC_01849	1.3e-79				K	Acetyltransferase (GNAT) domain
CJAHOPNC_01850	3.5e-38				L	Transposase
CJAHOPNC_01851	8.1e-80				L	Transposase
CJAHOPNC_01852	3.9e-19				L	Transposase
CJAHOPNC_01853	3.1e-26				L	Transposase
CJAHOPNC_01854	6.4e-75	cdd	2.4.2.4, 3.5.4.5		F	Cytidine and deoxycytidylate deaminase zinc-binding region
CJAHOPNC_01855	1.8e-144		2.4.2.3		F	Phosphorylase superfamily
CJAHOPNC_01856	4.3e-120	XK27_07525	3.6.1.55		F	NUDIX domain
CJAHOPNC_01858	1.4e-62
CJAHOPNC_01859	2.6e-83				S	Domain of unknown function (DUF5067)
CJAHOPNC_01861	3.6e-91				L	the current gene model (or a revised gene model) may contain a
CJAHOPNC_01862	3.7e-165				L	Transposase
CJAHOPNC_01863	5.3e-153				S	Membrane protein involved in the export of O-antigen and teichoic acid
CJAHOPNC_01864	5.6e-66				M	Glycosyltransferase like family 2
CJAHOPNC_01865	1.7e-23				L	Transposase
CJAHOPNC_01867	3.4e-07	sagD			S	ATP diphosphatase activity
CJAHOPNC_01870	1.1e-80				GM	NAD(P)H-binding
CJAHOPNC_01871	3.3e-106				C	Aldo keto reductase
CJAHOPNC_01872	1.6e-136	akr5f	1.1.1.346		S	reductase
CJAHOPNC_01873	1.7e-34				S	Domain of unknown function (DUF4440)
CJAHOPNC_01874	2.2e-10				K	Bacterial regulatory proteins, tetR family
CJAHOPNC_01875	4.9e-43				K	Bacterial regulatory proteins, tetR family
CJAHOPNC_01876	5.7e-273	ytgP			S	Polysaccharide biosynthesis protein
CJAHOPNC_01877	1.4e-145	lysA2			M	Glycosyl hydrolases family 25
CJAHOPNC_01878	2.2e-125				S	Protein of unknown function (DUF975)
CJAHOPNC_01879	3e-17
CJAHOPNC_01880	2.8e-48
CJAHOPNC_01881	1e-16
CJAHOPNC_01882	2.1e-126				S	CAAX protease self-immunity
CJAHOPNC_01883	5e-09
CJAHOPNC_01885	1.2e-174	pbpX2			V	Beta-lactamase
CJAHOPNC_01886	3.5e-249	dltD			M	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CJAHOPNC_01887	5.7e-36	dltC	6.1.1.13		J	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CJAHOPNC_01888	3e-242	dltB			M	MBOAT, membrane-bound O-acyltransferase family
CJAHOPNC_01889	7.2e-294	dltA	6.1.1.13		H	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CJAHOPNC_01890	2.4e-19				S	D-Ala-teichoic acid biosynthesis protein
CJAHOPNC_01891	2.2e-50
CJAHOPNC_01892	1e-215	ywhK			S	Membrane
CJAHOPNC_01893	5.6e-25	ykuL			S	IMP dehydrogenase activity
CJAHOPNC_01894	3.2e-47		1.1.1.3		T	phosphoserine phosphatase activity
CJAHOPNC_01895	6.6e-84				K	Bacterial regulatory proteins, tetR family
CJAHOPNC_01896	1.6e-108				K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CJAHOPNC_01897	1.8e-98				K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CJAHOPNC_01898	2.7e-165				K	COG COG0846 NAD-dependent protein deacetylases, SIR2 family
CJAHOPNC_01899	2e-94				K	acetyltransferase
CJAHOPNC_01900	1.2e-85	dps			P	Belongs to the Dps family
CJAHOPNC_01901	2.3e-166	snf	2.7.11.1		KL	domain protein
CJAHOPNC_01902	1.3e-105	plsY	2.3.1.15, 3.5.1.104		I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CJAHOPNC_01903	0.0	parE	5.99.1.3		L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CJAHOPNC_01904	0.0	parC	5.99.1.3		L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CJAHOPNC_01905	2.9e-171				K	Transcriptional regulator
CJAHOPNC_01906	1.1e-164	ppaC	3.6.1.1		C	inorganic pyrophosphatase
CJAHOPNC_01907	1.7e-110	ppiB	5.2.1.8		G	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CJAHOPNC_01908	8.9e-54				K	Helix-turn-helix domain
CJAHOPNC_01909	2.8e-27				L	Transposase
CJAHOPNC_01910	5.3e-133	yfjM			S	Protein of unknown function DUF262
CJAHOPNC_01911	5.9e-305	XK27_11280			S	Psort location CytoplasmicMembrane, score
CJAHOPNC_01912	2.4e-181	ackA	2.7.2.1		F	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CJAHOPNC_01913	0.0	pepO	3.4.24.71		O	Peptidase family M13
CJAHOPNC_01914	2.7e-61	pdxH			S	Pyridoxamine 5'-phosphate oxidase
CJAHOPNC_01915	3.6e-233	steT			E	amino acid
CJAHOPNC_01916	8.5e-159	amd	3.5.1.47		E	Peptidase family M20/M25/M40
CJAHOPNC_01917	5.1e-290				V	ABC-type multidrug transport system, ATPase and permease components
CJAHOPNC_01918	2.1e-247				V	ABC-type multidrug transport system, ATPase and permease components
CJAHOPNC_01919	8.7e-27				V	ABC-type multidrug transport system, ATPase and permease components
CJAHOPNC_01921	4.4e-16				L	PFAM IS66 Orf2 family protein
CJAHOPNC_01922	1.2e-08
CJAHOPNC_01924	2.6e-46				K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_01925	1.3e-41
CJAHOPNC_01926	1.4e-53				T	PemK-like, MazF-like toxin of type II toxin-antitoxin system
CJAHOPNC_01927	8.9e-45				L	Probable transposase
CJAHOPNC_01928	7.5e-56				L	Probable transposase
CJAHOPNC_01929	1.1e-245	brnQ			U	Component of the transport system for branched-chain amino acids
CJAHOPNC_01930	6.1e-42
CJAHOPNC_01931	1.1e-89	malY	4.4.1.8		E	Aminotransferase, class I
CJAHOPNC_01932	1.6e-56	malY	4.4.1.8		E	Aminotransferase, class I
CJAHOPNC_01933	4.3e-36
CJAHOPNC_01934	6.1e-102				S	LexA-binding, inner membrane-associated putative hydrolase
CJAHOPNC_01935	3.4e-22
CJAHOPNC_01936	4.4e-61				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_01937	1.8e-162				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_01938	6.6e-188	glvC	2.7.1.199, 2.7.1.208		G	phosphotransferase system, EIIB
CJAHOPNC_01939	9.3e-47	glvC	2.7.1.199, 2.7.1.208		G	phosphotransferase system, EIIB
CJAHOPNC_01940	2.3e-43				L	Transposase
CJAHOPNC_01941	2.7e-117	ugpQ	3.1.4.46		C	glycerophosphoryl diester phosphodiesterase
CJAHOPNC_01942	2.8e-51	ugpQ	3.1.4.46		C	glycerophosphoryl diester phosphodiesterase
CJAHOPNC_01943	1.1e-55
CJAHOPNC_01944	1.5e-277	yunD	3.1.3.5		F	Belongs to the 5'-nucleotidase family
CJAHOPNC_01945	1.8e-89	yutD			S	Protein of unknown function (DUF1027)
CJAHOPNC_01946	1.2e-146	nagD	2.7.1.25, 3.1.3.41		G	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CJAHOPNC_01947	2.2e-84				S	Protein of unknown function (DUF1461)
CJAHOPNC_01948	1.8e-116	dedA			S	SNARE-like domain protein
CJAHOPNC_01949	1.9e-152	yumC	1.18.1.2, 1.19.1.1, 1.8.1.9		C	Ferredoxin--NADP reductase
CJAHOPNC_01950	1.2e-117	ptp3	3.1.3.48		T	Tyrosine phosphatase family
CJAHOPNC_01951	5.4e-89		2.7.1.200, 2.7.1.202, 2.7.1.204		G	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CJAHOPNC_01952	5.7e-80	ntd	2.4.2.6		F	Nucleoside
CJAHOPNC_01953	0.0				G	Belongs to the glycosyl hydrolase 31 family
CJAHOPNC_01954	5.7e-29
CJAHOPNC_01955	1.9e-160				I	alpha/beta hydrolase fold
CJAHOPNC_01956	1.2e-130	yibF			S	overlaps another CDS with the same product name
CJAHOPNC_01957	1.7e-202	yibE			S	overlaps another CDS with the same product name
CJAHOPNC_01958	5.4e-93
CJAHOPNC_01959	4.7e-207	ddl	6.3.2.4		F	Belongs to the D-alanine--D-alanine ligase family
CJAHOPNC_01960	2.4e-231				S	Cysteine-rich secretory protein family
CJAHOPNC_01961	6.9e-133	glnQ	3.6.3.21		E	ABC transporter, ATP-binding protein
CJAHOPNC_01962	1.4e-262	glnPH2			P	ABC transporter permease
CJAHOPNC_01963	1e-129
CJAHOPNC_01964	1.7e-122	luxT			K	Bacterial regulatory proteins, tetR family
CJAHOPNC_01965	5.3e-181	prs	2.7.6.1		F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CJAHOPNC_01966	5.2e-64
CJAHOPNC_01967	1.5e-115				GM	NmrA-like family
CJAHOPNC_01968	3.3e-126				S	Alpha/beta hydrolase family
CJAHOPNC_01969	1.8e-158	epsV	2.7.8.12		S	glycosyl transferase family 2
CJAHOPNC_01970	9.7e-140	ypuA			S	Protein of unknown function (DUF1002)
CJAHOPNC_01971	5.6e-146	rnhA	3.1.26.4		L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CJAHOPNC_01972	1e-178				S	Alpha/beta hydrolase of unknown function (DUF915)
CJAHOPNC_01973	4.5e-285	cls			I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJAHOPNC_01974	3.5e-85
CJAHOPNC_01975	1.7e-24	cobB			K	SIR2 family
CJAHOPNC_01976	1.1e-163				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_01977	6.9e-26	cobB			K	SIR2 family
CJAHOPNC_01978	3.2e-92	ogt	2.1.1.63		L	6-O-methylguanine DNA methyltransferase, DNA binding domain
CJAHOPNC_01979	3.8e-121	terC			P	Integral membrane protein TerC family
CJAHOPNC_01980	8.2e-63	yeaO			S	Protein of unknown function, DUF488
CJAHOPNC_01981	3.3e-123	mpg	3.2.2.21		L	Belongs to the DNA glycosylase MPG family
CJAHOPNC_01982	7e-218	glnP			P	ABC transporter permease
CJAHOPNC_01983	6.5e-51	glnP			P	ABC transporter permease
CJAHOPNC_01984	7.5e-135	glnQ			E	ABC transporter, ATP-binding protein
CJAHOPNC_01985	2.4e-161				L	HNH nucleases
CJAHOPNC_01986	2.2e-122	yfbR			S	HD containing hydrolase-like enzyme
CJAHOPNC_01988	1.7e-48				L	Transposase
CJAHOPNC_01989	3.1e-78	usp6			T	universal stress protein
CJAHOPNC_01990	2.5e-35
CJAHOPNC_01991	7.2e-242	rarA			L	recombination factor protein RarA
CJAHOPNC_01992	2.7e-82	yueI			S	Protein of unknown function (DUF1694)
CJAHOPNC_01993	8e-111	rpsD			J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CJAHOPNC_01994	1.2e-281	ezrA			D	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CJAHOPNC_01995	7.1e-217	iscS2	2.8.1.7		E	Aminotransferase class V
CJAHOPNC_01996	7.7e-230	thiI	2.8.1.4		H	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJAHOPNC_01997	2.2e-128	rsuA	5.4.99.19, 5.4.99.22		J	Belongs to the pseudouridine synthase RsuA family
CJAHOPNC_01998	2.1e-15				K	Helix-turn-helix XRE-family like proteins
CJAHOPNC_01999	2.3e-27				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_02000	1.6e-57	pacL	3.6.3.8		P	P-type ATPase
CJAHOPNC_02001	2.5e-198	pacL	3.6.3.8		P	P-type ATPase
CJAHOPNC_02002	5.6e-99	pacL	3.6.3.8		P	P-type ATPase
CJAHOPNC_02003	2.1e-55	pacL	3.6.3.8		P	P-type ATPase
CJAHOPNC_02004	3.3e-225				M	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CJAHOPNC_02005	1.3e-260	epsU			S	Polysaccharide biosynthesis protein
CJAHOPNC_02006	5.7e-137				M	Glycosyltransferase sugar-binding region containing DXD motif
CJAHOPNC_02007	2.1e-87	ydcK			S	Belongs to the SprT family
CJAHOPNC_02009	1.2e-104	acmC	3.2.1.17, 3.2.1.96		NU	mannosyl-glycoprotein
CJAHOPNC_02010	0.0	pcrA	3.6.4.12		L	ATP-dependent DNA helicase
CJAHOPNC_02011	0.0	ligA	6.5.1.2		L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CJAHOPNC_02012	4.9e-210	camS			S	sex pheromone
CJAHOPNC_02013	5.2e-50	gatC	6.3.5.6, 6.3.5.7		J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CJAHOPNC_02014	9.9e-261	gatA	6.3.5.6, 6.3.5.7		J	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CJAHOPNC_02015	2.9e-276	gatB	6.1.1.12, 6.3.5.6, 6.3.5.7		J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CJAHOPNC_02016	1e-170	yegS	2.7.1.107		G	Lipid kinase
CJAHOPNC_02017	5.2e-108				S	Protein of unknown function (DUF1211)
CJAHOPNC_02018	4.9e-120	ybhL			S	Belongs to the BI1 family
CJAHOPNC_02019	4e-08				KLT	Protein kinase domain
CJAHOPNC_02020	4.7e-155				V	ABC transporter transmembrane region
CJAHOPNC_02021	1.2e-18
CJAHOPNC_02022	7.1e-264				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_02023	6.1e-219	naiP			EGP	Major facilitator Superfamily
CJAHOPNC_02024	2e-274	XK27_00340	3.1.3.5		F	Belongs to the 5'-nucleotidase family
CJAHOPNC_02025	1.4e-66	XK27_00340	3.1.3.5		F	Belongs to the 5'-nucleotidase family
CJAHOPNC_02026	2.1e-46	oppA			E	ABC transporter
CJAHOPNC_02027	3.8e-47	psaA			P	Belongs to the bacterial solute-binding protein 9 family
CJAHOPNC_02030	1.1e-217	metK	2.5.1.6		H	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CJAHOPNC_02031	7.9e-32	qacA			EGP	Major facilitator Superfamily
CJAHOPNC_02032	4.3e-217	qacA			EGP	Major facilitator Superfamily
CJAHOPNC_02033	5.3e-69	hepT	2.5.1.30, 2.5.1.90		H	Belongs to the FPP GGPP synthase family
CJAHOPNC_02034	0.0	ltaS	2.7.8.20		M	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CJAHOPNC_02035	8.3e-108	vanZ			V	VanZ like family
CJAHOPNC_02036	6.4e-262	pgi	5.3.1.9		G	Belongs to the GPI family
CJAHOPNC_02037	6.5e-118				EGP	Major facilitator Superfamily
CJAHOPNC_02038	4.4e-14				EGP	Major facilitator Superfamily
CJAHOPNC_02039	1.5e-103				S	Uncharacterised protein family (UPF0236)
CJAHOPNC_02040	2.9e-96	nqr	1.5.1.36		S	NADPH-dependent FMN reductase
CJAHOPNC_02041	5.9e-97	azr	1.5.1.36		S	NADPH-dependent FMN reductase
CJAHOPNC_02042	8.7e-150		3.1.3.48		T	Tyrosine phosphatase family
CJAHOPNC_02043	5e-181	apbE	2.7.1.180		H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CJAHOPNC_02044	6.6e-85	cvpA			S	Colicin V production protein
CJAHOPNC_02045	1.4e-107	rsmG	2.1.1.170		J	Specifically methylates the N7 position of a guanine in 16S rRNA
CJAHOPNC_02046	1.6e-149	noc			K	Belongs to the ParB family
CJAHOPNC_02047	3.4e-138	soj			D	Sporulation initiation inhibitor
CJAHOPNC_02048	2.9e-154	spo0J			K	Belongs to the ParB family
CJAHOPNC_02049	2.1e-44	yyzM			S	Bacterial protein of unknown function (DUF951)
CJAHOPNC_02050	1.6e-202	ychF			J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CJAHOPNC_02051	2.6e-138	XK27_01040			S	Protein of unknown function (DUF1129)
CJAHOPNC_02052	2.2e-307				V	ABC transporter, ATP-binding protein
CJAHOPNC_02053	0.0				V	ABC transporter
CJAHOPNC_02054	5.1e-122				K	response regulator
CJAHOPNC_02055	4.1e-209	hpk31	2.7.13.3		T	His Kinase A (phospho-acceptor) domain
CJAHOPNC_02056	1e-303	murE	6.3.2.13, 6.3.2.7		M	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CJAHOPNC_02057	4.2e-146	racD	5.1.1.13		M	Belongs to the aspartate glutamate racemases family
CJAHOPNC_02058	1.7e-113				S	Archaea bacterial proteins of unknown function
CJAHOPNC_02059	1.3e-13				S	Enterocin A Immunity
CJAHOPNC_02060	3.9e-34				S	Enterocin A Immunity
CJAHOPNC_02061	1e-34	yozG			K	Transcriptional regulator
CJAHOPNC_02062	7.1e-33
CJAHOPNC_02063	8.7e-27
CJAHOPNC_02066	2e-20				L	An automated process has identified a potential problem with this gene model
CJAHOPNC_02067	8.8e-57	fruR			K	DeoR C terminal sensor domain
CJAHOPNC_02068	4.2e-78	fruR			K	DeoR C terminal sensor domain
CJAHOPNC_02069	1.3e-168	pfkB	2.7.1.11, 2.7.1.56		H	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CJAHOPNC_02070	2.4e-138				L	Transposase and inactivated derivatives, IS30 family
CJAHOPNC_02071	3.2e-56	ylxM			S	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CJAHOPNC_02072	2.2e-228	ffh	3.6.5.4		U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CJAHOPNC_02073	4.5e-45	rpsP			J	Belongs to the bacterial ribosomal protein bS16 family
CJAHOPNC_02074	1.5e-94	rimM			J	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CJAHOPNC_02075	2.2e-136	trmD	2.1.1.228, 4.6.1.12		J	Belongs to the RNA methyltransferase TrmD family
CJAHOPNC_02076	1.1e-56	rplS			J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CJAHOPNC_02077	2.6e-100	ung2	3.2.2.27		L	Uracil-DNA glycosylase
CJAHOPNC_02078	3.1e-147				E	GDSL-like Lipase/Acylhydrolase family
CJAHOPNC_02079	2.1e-114	lexA	3.4.21.88		K	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CJAHOPNC_02080	5.1e-38	ynzC			S	UPF0291 protein
CJAHOPNC_02081	2.5e-30	yneF			S	Uncharacterised protein family (UPF0154)
CJAHOPNC_02082	1.2e-32	def	3.5.1.31, 3.5.1.88		J	Removes the formyl group from the N-terminal Met of newly synthesized proteins
CJAHOPNC_02083	2.5e-27	def	3.5.1.31, 3.5.1.88		J	Removes the formyl group from the N-terminal Met of newly synthesized proteins
CJAHOPNC_02084	2.3e-195	pbpX1			V	Beta-lactamase
CJAHOPNC_02085	0.0				L	Helicase C-terminal domain protein
CJAHOPNC_02086	8.9e-28				E	amino acid
CJAHOPNC_02087	7e-47				E	amino acid
CJAHOPNC_02088	2.8e-159	xth	3.1.11.2		L	exodeoxyribonuclease III
CJAHOPNC_02089	4e-169	yniA			G	Phosphotransferase enzyme family
CJAHOPNC_02090	6.9e-192	ldhA	1.1.1.28		C	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJAHOPNC_02091	6.4e-63		3.1.3.102, 3.1.3.104, 3.1.3.23		S	haloacid dehalogenase-like hydrolase
CJAHOPNC_02092	5.1e-78		3.1.3.102, 3.1.3.104, 3.1.3.23		S	haloacid dehalogenase-like hydrolase
CJAHOPNC_02093	1.3e-43	tetP			J	elongation factor G
CJAHOPNC_02094	1.7e-226	tetP			J	elongation factor G
CJAHOPNC_02095	6.2e-68	tetP			J	elongation factor G
CJAHOPNC_02096	4.7e-165	yvgN			C	Aldo keto reductase
CJAHOPNC_02097	2.1e-38				S	SLAP domain
CJAHOPNC_02098	5.5e-94				L	Transposase
CJAHOPNC_02101	1.7e-51		3.6.4.12		S	PD-(D/E)XK nuclease family transposase
CJAHOPNC_02102	4.5e-140				S	Uncharacterized protein conserved in bacteria (DUF2263)
CJAHOPNC_02103	5.1e-60
CJAHOPNC_02104	6e-16	lhr			L	DEAD DEAH box helicase
CJAHOPNC_02105	0.0	uvrA			L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CJAHOPNC_02106	0.0	uvrB			L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CJAHOPNC_02107	0.0	pgm	5.4.2.2, 5.4.2.8		G	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CJAHOPNC_02108	1.1e-49	glgC	2.7.7.27		H	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CJAHOPNC_02109	3e-187	gpsA	1.1.1.94		I	Glycerol-3-phosphate dehydrogenase
CJAHOPNC_02110	3.2e-158	lgt	2.1.1.199		M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CJAHOPNC_02111	7.6e-180	hprK			F	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CJAHOPNC_02112	5.1e-19
CJAHOPNC_02113	2.3e-187	prfB			J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CJAHOPNC_02114	0.0	secA			U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CJAHOPNC_02115	2.5e-95	hpf			J	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CJAHOPNC_02116	2.6e-134	comFC			S	Competence protein
CJAHOPNC_02117	2.4e-40	comFA			L	Helicase C-terminal domain protein
CJAHOPNC_02118	7.2e-189	comFA			L	Helicase C-terminal domain protein
CJAHOPNC_02119	1.3e-117	yvyE	3.4.13.9		S	YigZ family
CJAHOPNC_02120	4.6e-208	tagO	2.7.8.33, 2.7.8.35		M	transferase
CJAHOPNC_02121	9.5e-220	rny			S	Endoribonuclease that initiates mRNA decay
CJAHOPNC_02122	7.2e-195	recA			L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CJAHOPNC_02123	1e-96	pgsA	2.7.8.41, 2.7.8.5		I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CJAHOPNC_02124	1.6e-144	ymfM			S	Helix-turn-helix domain
CJAHOPNC_02125	1e-133				IQ	Enoyl-(Acyl carrier protein) reductase
CJAHOPNC_02126	1e-237				S	Peptidase M16
CJAHOPNC_02127	6e-227		2.7.1.26, 2.7.7.2		S	Peptidase M16 inactive domain protein
CJAHOPNC_02128	0.0	ftsK			D	Belongs to the FtsK SpoIIIE SftA family
CJAHOPNC_02129	1.4e-68	WQ51_03320			S	Protein of unknown function (DUF1149)
CJAHOPNC_02130	5.5e-106	trmL	2.1.1.207		J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CJAHOPNC_02131	7.1e-212	yubA			S	AI-2E family transporter
CJAHOPNC_02132	3.7e-23	srlB	2.7.1.198		G	PTS system glucitol/sorbitol-specific IIA component
CJAHOPNC_02133	2.9e-27	srlB	2.7.1.198		G	PTS system glucitol/sorbitol-specific IIA component
CJAHOPNC_02134	0.0	pacL	3.6.3.8, 3.6.3.9		P	Cation transporter/ATPase, N-terminus
CJAHOPNC_02135	8.8e-203	pgl	3.1.1.31		G	Lactonase, 7-bladed beta-propeller
CJAHOPNC_02136	1.3e-109				S	SNARE associated Golgi protein
CJAHOPNC_02137	1.1e-277	mycA	4.2.1.53		S	Myosin-crossreactive antigen
CJAHOPNC_02138	3.2e-133				S	ABC transporter
CJAHOPNC_02139	2.9e-09				C	WbqC-like protein family
CJAHOPNC_02140	3.5e-160	degV			S	EDD domain protein, DegV family
CJAHOPNC_02141	3e-39
CJAHOPNC_02142	8.2e-10
CJAHOPNC_02143	1.5e-17	deoC	4.1.2.4		F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CJAHOPNC_02145	1.4e-198	tsaD	2.3.1.234		J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CJAHOPNC_02146	1.6e-105	rimI	2.3.1.128		K	Ribosomal-protein-alanine acetyltransferase
CJAHOPNC_02147	2.4e-133	yeaZ	2.3.1.234		O	Universal bacterial protein YeaZ
CJAHOPNC_02148	3.4e-86				S	ECF transporter, substrate-specific component
CJAHOPNC_02149	1.6e-142	fat	3.1.2.21		I	Acyl-ACP thioesterase
CJAHOPNC_02150	7.9e-157	rsmI	2.1.1.198		H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CJAHOPNC_02151	1.9e-56	yabA			L	Involved in initiation control of chromosome replication
CJAHOPNC_02152	1.5e-155	holB	2.7.7.7		L	DNA polymerase III
CJAHOPNC_02153	1.1e-50	yaaQ			S	Cyclic-di-AMP receptor
CJAHOPNC_02154	2.5e-115	tmk	2.7.4.9		F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CJAHOPNC_02155	2.9e-35				S	Protein of unknown function (DUF2508)
CJAHOPNC_02156	2.1e-108	recR			L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CJAHOPNC_02157	5e-38	yaaK			S	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CJAHOPNC_02158	0.0	dnaX	2.7.7.7		L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CJAHOPNC_02159	6.9e-92	tadA	3.5.4.33		F	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CJAHOPNC_02160	2.7e-117	rsmC	2.1.1.172		J	Methyltransferase
CJAHOPNC_02161	4.2e-80	rsmC	2.1.1.172, 2.1.1.80, 3.1.1.61		J	Ion channel
CJAHOPNC_02162	2.4e-54	rplL			J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CJAHOPNC_02163	5.4e-84	rplJ			J	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CJAHOPNC_02164	3.3e-156	yfdV			S	Membrane transport protein
CJAHOPNC_02165	4.3e-27	yfdV			S	Membrane transport protein
CJAHOPNC_02166	7.5e-118	phoU			P	Plays a role in the regulation of phosphate uptake
CJAHOPNC_02167	7.8e-140	pstB	3.6.3.27		P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CJAHOPNC_02168	1.1e-144	pstB	3.6.3.27		P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CJAHOPNC_02169	7e-156	pstA			P	Phosphate transport system permease protein PstA
CJAHOPNC_02170	3.7e-174	pstC			P	probably responsible for the translocation of the substrate across the membrane
CJAHOPNC_02171	4.3e-158	pstS			P	Phosphate
CJAHOPNC_02172	1.6e-32	XK27_08435			K	UTRA
CJAHOPNC_02173	2e-129				K	UTRA
CJAHOPNC_02174	4.7e-182				S	Oxidoreductase family, NAD-binding Rossmann fold
CJAHOPNC_02175	6.7e-24	deoC	4.1.2.4		F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate