ORF_ID e_value Gene_name EC_number CAZy COGs Description
LNECOIGD_00001 2.1e-72 S Iron-sulphur cluster biosynthesis
LNECOIGD_00003 5.4e-127 3.6.1.13, 3.6.1.55 F NUDIX domain
LNECOIGD_00004 2.4e-267 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LNECOIGD_00005 7.5e-108 pncA Q Isochorismatase family
LNECOIGD_00006 1.2e-54 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
LNECOIGD_00007 8.8e-144 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
LNECOIGD_00009 3.9e-116 K UTRA domain
LNECOIGD_00010 8.6e-289 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LNECOIGD_00011 3.9e-170 S Aldo keto reductase
LNECOIGD_00012 1.8e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
LNECOIGD_00013 5.1e-82
LNECOIGD_00014 1.4e-35 C FMN_bind
LNECOIGD_00015 1.6e-152 I Protein of unknown function (DUF2974)
LNECOIGD_00016 5.3e-110 3.6.1.55 F NUDIX domain
LNECOIGD_00017 3.5e-205 pbpX1 V Beta-lactamase
LNECOIGD_00018 5.7e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LNECOIGD_00019 1.8e-212 aspC 2.6.1.1 E Aminotransferase
LNECOIGD_00020 4.3e-141 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LNECOIGD_00021 2.3e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LNECOIGD_00022 6.8e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LNECOIGD_00023 3.6e-78 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LNECOIGD_00024 3.6e-249 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LNECOIGD_00025 1.9e-261 lysC 2.7.2.4 E Belongs to the aspartokinase family
LNECOIGD_00026 9.2e-189 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LNECOIGD_00027 2.4e-273 yjeM E Amino Acid
LNECOIGD_00028 5.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
LNECOIGD_00029 4.5e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LNECOIGD_00030 4.9e-206 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LNECOIGD_00031 4.7e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LNECOIGD_00032 2.4e-150
LNECOIGD_00033 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LNECOIGD_00034 7e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LNECOIGD_00035 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
LNECOIGD_00036 4.8e-174 holA 2.7.7.7 L DNA polymerase III delta subunit
LNECOIGD_00037 0.0 comEC S Competence protein ComEC
LNECOIGD_00038 3.1e-82 comEA L Competence protein ComEA
LNECOIGD_00039 4.1e-192 ylbL T Belongs to the peptidase S16 family
LNECOIGD_00040 2.7e-85 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LNECOIGD_00041 8.5e-96 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
LNECOIGD_00042 8.7e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
LNECOIGD_00043 1.5e-206 ftsW D Belongs to the SEDS family
LNECOIGD_00044 0.0 typA T GTP-binding protein TypA
LNECOIGD_00045 1.7e-99 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LNECOIGD_00046 4.2e-33 ykzG S Belongs to the UPF0356 family
LNECOIGD_00047 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LNECOIGD_00048 2.2e-27 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
LNECOIGD_00049 9.1e-107 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
LNECOIGD_00050 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LNECOIGD_00051 1.4e-100 S Repeat protein
LNECOIGD_00052 7.3e-126 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
LNECOIGD_00053 6.7e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LNECOIGD_00054 4.1e-56 XK27_04120 S Putative amino acid metabolism
LNECOIGD_00055 3.5e-216 iscS 2.8.1.7 E Aminotransferase class V
LNECOIGD_00056 2.5e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LNECOIGD_00057 2.1e-38
LNECOIGD_00058 4.4e-103 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
LNECOIGD_00059 2.1e-31 cspA K 'Cold-shock' DNA-binding domain
LNECOIGD_00060 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LNECOIGD_00061 3e-73 gpsB D DivIVA domain protein
LNECOIGD_00062 4.8e-148 ylmH S S4 domain protein
LNECOIGD_00063 9e-47 yggT S YGGT family
LNECOIGD_00064 4.8e-73 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LNECOIGD_00065 1.6e-204 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LNECOIGD_00066 2.6e-234 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LNECOIGD_00067 2.2e-130 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LNECOIGD_00068 8e-210 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LNECOIGD_00069 4.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LNECOIGD_00070 7.1e-178 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LNECOIGD_00071 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
LNECOIGD_00072 2.7e-53 ftsL D Cell division protein FtsL
LNECOIGD_00073 4.4e-183 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LNECOIGD_00074 9.1e-77 mraZ K Belongs to the MraZ family
LNECOIGD_00075 2.2e-54 S Protein of unknown function (DUF3397)
LNECOIGD_00076 6.5e-13 S Protein of unknown function (DUF4044)
LNECOIGD_00077 1.1e-95 mreD
LNECOIGD_00078 4.3e-147 mreC M Involved in formation and maintenance of cell shape
LNECOIGD_00079 4.2e-173 mreB D cell shape determining protein MreB
LNECOIGD_00080 2.1e-114 radC L DNA repair protein
LNECOIGD_00081 5.7e-126 S Haloacid dehalogenase-like hydrolase
LNECOIGD_00082 3e-237 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LNECOIGD_00083 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LNECOIGD_00084 1.4e-96
LNECOIGD_00085 9.5e-92 S Bacterial membrane protein, YfhO
LNECOIGD_00086 1.5e-119 S Bacterial membrane protein, YfhO
LNECOIGD_00087 1.1e-12 S Bacterial membrane protein, YfhO
LNECOIGD_00088 8.9e-170 yfdH GT2 M Glycosyltransferase like family 2
LNECOIGD_00089 2.4e-66 2.4.1.83 GT2 S GtrA-like protein
LNECOIGD_00090 9.4e-211 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
LNECOIGD_00091 6.7e-23
LNECOIGD_00092 4.7e-97 rafA 3.2.1.22 G alpha-galactosidase
LNECOIGD_00093 9.7e-65 rafA 3.2.1.22 G alpha-galactosidase
LNECOIGD_00094 4.6e-188 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
LNECOIGD_00095 1.4e-134 manY G PTS system
LNECOIGD_00096 2.2e-173 manN G system, mannose fructose sorbose family IID component
LNECOIGD_00097 7.6e-64 manO S Domain of unknown function (DUF956)
LNECOIGD_00098 2.4e-104 K Transcriptional regulator
LNECOIGD_00099 1.2e-22 K Transcriptional regulator
LNECOIGD_00100 1.4e-82 maa S transferase hexapeptide repeat
LNECOIGD_00101 8.6e-238 cycA E Amino acid permease
LNECOIGD_00102 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LNECOIGD_00103 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LNECOIGD_00104 7.4e-46
LNECOIGD_00105 1e-102 yagE E amino acid
LNECOIGD_00106 1e-72
LNECOIGD_00107 2.4e-89 UW LPXTG-motif cell wall anchor domain protein
LNECOIGD_00108 9.6e-80 S LPXTG cell wall anchor motif
LNECOIGD_00109 8.8e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LNECOIGD_00110 3.9e-136 4.1.1.44 S Carboxymuconolactone decarboxylase family
LNECOIGD_00111 6.4e-37
LNECOIGD_00112 7.7e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
LNECOIGD_00113 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
LNECOIGD_00114 2e-258 S TerB-C domain
LNECOIGD_00115 2.3e-251 P P-loop Domain of unknown function (DUF2791)
LNECOIGD_00116 0.0 lhr L DEAD DEAH box helicase
LNECOIGD_00117 5.1e-60
LNECOIGD_00118 2.9e-139 S Uncharacterized protein conserved in bacteria (DUF2263)
LNECOIGD_00119 1.1e-14 K Bacterial regulatory helix-turn-helix protein, lysR family
LNECOIGD_00120 3e-49 C FAD binding domain
LNECOIGD_00121 3.1e-26 C FAD binding domain
LNECOIGD_00122 1.7e-71 C FAD binding domain
LNECOIGD_00124 1.9e-127 XK27_08435 K UTRA
LNECOIGD_00125 1.5e-227 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LNECOIGD_00126 9.9e-61 rpiR1 K Helix-turn-helix domain, rpiR family
LNECOIGD_00127 3.4e-70 S Iron-sulphur cluster biosynthesis
LNECOIGD_00128 7.1e-32
LNECOIGD_00129 2.1e-67
LNECOIGD_00130 1.5e-95 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
LNECOIGD_00131 1.1e-25 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
LNECOIGD_00132 5.6e-13
LNECOIGD_00133 3e-45 M LysM domain protein
LNECOIGD_00134 1.7e-196 D nuclear chromosome segregation
LNECOIGD_00135 1.7e-110 G Phosphoglycerate mutase family
LNECOIGD_00136 3.2e-228 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
LNECOIGD_00137 3.2e-132 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LNECOIGD_00138 2.6e-14 scrA 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNECOIGD_00139 3e-216 scrA 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNECOIGD_00140 1.2e-124 scrB 3.2.1.26 GH32 G invertase
LNECOIGD_00141 9.1e-98 msmR7 K helix_turn_helix, arabinose operon control protein
LNECOIGD_00142 3.8e-45 msmR7 K helix_turn_helix, arabinose operon control protein
LNECOIGD_00144 3.6e-288 V ABC-type multidrug transport system, ATPase and permease components
LNECOIGD_00145 9.8e-286 V ABC-type multidrug transport system, ATPase and permease components
LNECOIGD_00146 8.2e-230 pbuG S permease
LNECOIGD_00147 7.5e-25 K helix_turn_helix, mercury resistance
LNECOIGD_00148 4.7e-85 K helix_turn_helix, mercury resistance
LNECOIGD_00149 2e-86 L Resolvase, N terminal domain
LNECOIGD_00150 2.2e-154 glcU U sugar transport
LNECOIGD_00151 1.1e-264 pepC 3.4.22.40 E Peptidase C1-like family
LNECOIGD_00152 1.1e-145 glcU U sugar transport
LNECOIGD_00153 2.3e-09
LNECOIGD_00154 2e-194 L Transposase and inactivated derivatives, IS30 family
LNECOIGD_00155 2.8e-183 P secondary active sulfate transmembrane transporter activity
LNECOIGD_00156 1.5e-95 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
LNECOIGD_00157 3.2e-223 oxlT P Major Facilitator Superfamily
LNECOIGD_00158 9.5e-92 L Helix-turn-helix domain
LNECOIGD_00159 1.2e-103 L HTH-like domain
LNECOIGD_00160 0.0 uvrA2 L ABC transporter
LNECOIGD_00163 7.6e-163 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LNECOIGD_00164 2.6e-255 L Probable transposase
LNECOIGD_00165 1e-105 L Resolvase, N terminal domain
LNECOIGD_00166 1.9e-46 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
LNECOIGD_00167 5.9e-70 S Iron-sulphur cluster biosynthesis
LNECOIGD_00168 3.4e-192 ybiR P Citrate transporter
LNECOIGD_00169 2.3e-96 lemA S LemA family
LNECOIGD_00170 5.6e-161 htpX O Belongs to the peptidase M48B family
LNECOIGD_00171 2.5e-73 L Helix-turn-helix domain
LNECOIGD_00172 1.3e-30 L Helix-turn-helix domain
LNECOIGD_00173 3.9e-60 L hmm pf00665
LNECOIGD_00174 1.6e-34 L hmm pf00665
LNECOIGD_00175 2.4e-37 L hmm pf00665
LNECOIGD_00177 0.0 res 3.1.21.5 L Type III restriction enzyme, res subunit
LNECOIGD_00178 5.1e-241 mod 2.1.1.72 L DNA methylase
LNECOIGD_00179 1.9e-172 K helix_turn_helix, arabinose operon control protein
LNECOIGD_00180 2.5e-245 cbiO1 S ABC transporter, ATP-binding protein
LNECOIGD_00181 1.4e-89 P Cobalt transport protein
LNECOIGD_00182 2e-171 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
LNECOIGD_00183 2.5e-78 S SLAP domain
LNECOIGD_00184 3.5e-100 S Bacteriocin helveticin-J
LNECOIGD_00185 1.7e-52 K Helix-turn-helix XRE-family like proteins
LNECOIGD_00186 5e-23 K Helix-turn-helix XRE-family like proteins
LNECOIGD_00187 4.3e-91 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LNECOIGD_00188 2.2e-179 htrA 3.4.21.107 O serine protease
LNECOIGD_00189 1.5e-146 vicX 3.1.26.11 S domain protein
LNECOIGD_00190 2.7e-146 yycI S YycH protein
LNECOIGD_00191 6.7e-243 yycH S YycH protein
LNECOIGD_00192 2e-306 vicK 2.7.13.3 T Histidine kinase
LNECOIGD_00193 2.2e-131 K response regulator
LNECOIGD_00195 1.4e-33
LNECOIGD_00197 6.7e-11 L Transposase
LNECOIGD_00198 9.9e-166 S SLAP domain
LNECOIGD_00199 2.4e-133
LNECOIGD_00200 5.1e-196 S SLAP domain
LNECOIGD_00201 5.6e-146 arbV 2.3.1.51 I Acyl-transferase
LNECOIGD_00202 1.3e-66
LNECOIGD_00203 1.9e-14
LNECOIGD_00204 1.3e-87 K Helix-turn-helix domain
LNECOIGD_00205 4.9e-42 K Helix-turn-helix domain
LNECOIGD_00206 4.1e-158 arbx M Glycosyl transferase family 8
LNECOIGD_00207 1.7e-184 arbY M Glycosyl transferase family 8
LNECOIGD_00208 5.3e-162 arbY M Glycosyl transferase family 8
LNECOIGD_00209 7.3e-166 arbZ I Phosphate acyltransferases
LNECOIGD_00210 1.3e-34 S Cytochrome b5
LNECOIGD_00211 3.8e-108 K Transcriptional regulator, LysR family
LNECOIGD_00212 6.8e-100 K LysR substrate binding domain
LNECOIGD_00213 2e-41 K LysR substrate binding domain
LNECOIGD_00214 2.8e-07 ropB K Transcriptional regulator
LNECOIGD_00215 3.9e-208 EGP Major facilitator Superfamily
LNECOIGD_00216 3.2e-286 lsa S ABC transporter
LNECOIGD_00217 7.2e-135 gmuR K UTRA
LNECOIGD_00218 9.7e-63 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNECOIGD_00219 3.2e-242 amtB P ammonium transporter
LNECOIGD_00220 8.8e-110 S ABC-2 family transporter protein
LNECOIGD_00221 8.8e-142 S ABC-2 family transporter protein
LNECOIGD_00223 9.1e-122 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
LNECOIGD_00224 1.9e-121 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
LNECOIGD_00225 2.9e-120 V ABC transporter transmembrane region
LNECOIGD_00226 9.3e-78 V ABC transporter transmembrane region
LNECOIGD_00227 1.8e-18
LNECOIGD_00228 2.5e-64 XK27_01125 L IS66 Orf2 like protein
LNECOIGD_00229 5.8e-32 S Transposase C of IS166 homeodomain
LNECOIGD_00230 1.7e-205 L COG3547 Transposase and inactivated derivatives
LNECOIGD_00231 3.2e-239 L Probable transposase
LNECOIGD_00232 2.4e-140 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LNECOIGD_00233 2.7e-20 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LNECOIGD_00234 2.2e-105 K Bacterial regulatory proteins, tetR family
LNECOIGD_00235 9e-106 L NgoFVII restriction endonuclease
LNECOIGD_00236 3.2e-211 Z012_07420 3.1.21.5 V Z1 domain
LNECOIGD_00237 2e-147 2.1.1.37 H C-5 cytosine-specific DNA methylase
LNECOIGD_00238 2.3e-48 vsr L DNA mismatch endonuclease Vsr
LNECOIGD_00239 2.5e-59 pipD E Dipeptidase
LNECOIGD_00240 3.2e-232 S LPXTG cell wall anchor motif
LNECOIGD_00241 6.1e-148 S Putative ABC-transporter type IV
LNECOIGD_00242 2.5e-98 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
LNECOIGD_00243 1.7e-85 S ECF transporter, substrate-specific component
LNECOIGD_00244 2.1e-59 S Domain of unknown function (DUF4430)
LNECOIGD_00245 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
LNECOIGD_00246 7.1e-176 K AI-2E family transporter
LNECOIGD_00247 6.2e-105 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
LNECOIGD_00248 3.1e-10
LNECOIGD_00249 4.1e-51
LNECOIGD_00250 9.6e-138 XK27_08845 S ABC transporter, ATP-binding protein
LNECOIGD_00251 6.4e-125 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
LNECOIGD_00252 5.5e-178 ABC-SBP S ABC transporter
LNECOIGD_00253 9.2e-135 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LNECOIGD_00254 1.7e-15 S Bacteriocin helveticin-J
LNECOIGD_00255 1.1e-211 S SLAP domain
LNECOIGD_00256 3e-164 yvgN C Aldo keto reductase
LNECOIGD_00257 0.0 tetP J elongation factor G
LNECOIGD_00258 7.9e-154 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
LNECOIGD_00259 6.7e-269 nisT V ABC transporter
LNECOIGD_00260 2.9e-46
LNECOIGD_00261 3.3e-56
LNECOIGD_00262 3.4e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNECOIGD_00263 8.9e-68 yniA G Phosphotransferase enzyme family
LNECOIGD_00264 4.1e-92 yniA G Phosphotransferase enzyme family
LNECOIGD_00265 3.3e-160 xth 3.1.11.2 L exodeoxyribonuclease III
LNECOIGD_00266 1.4e-262 E amino acid
LNECOIGD_00267 0.0 L Helicase C-terminal domain protein
LNECOIGD_00268 7.3e-194 pbpX1 V Beta-lactamase
LNECOIGD_00269 5.1e-69 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LNECOIGD_00270 2.1e-64 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LNECOIGD_00271 2.9e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LNECOIGD_00272 5.5e-29 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
LNECOIGD_00278 1.6e-20
LNECOIGD_00279 4.6e-118 ropB K Transcriptional regulator
LNECOIGD_00280 3.6e-151 xerD L Phage integrase, N-terminal SAM-like domain
LNECOIGD_00281 4.6e-56 UW LPXTG-motif cell wall anchor domain protein
LNECOIGD_00283 5e-142 L COG3547 Transposase and inactivated derivatives
LNECOIGD_00294 8e-124 M NlpC P60 family protein
LNECOIGD_00295 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LNECOIGD_00296 1.3e-154 S ABC transporter
LNECOIGD_00297 3e-09 C WbqC-like protein family
LNECOIGD_00298 1.7e-31
LNECOIGD_00299 2.1e-39
LNECOIGD_00300 2.3e-90 3.6.1.55 L NUDIX domain
LNECOIGD_00301 3.5e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
LNECOIGD_00302 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LNECOIGD_00303 2.2e-12 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LNECOIGD_00304 6.1e-111 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LNECOIGD_00305 2e-102 padC Q Phenolic acid decarboxylase
LNECOIGD_00306 6.1e-91 padR K Virulence activator alpha C-term
LNECOIGD_00307 1.5e-110 M ErfK YbiS YcfS YnhG
LNECOIGD_00308 6.2e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LNECOIGD_00309 6.4e-243 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LNECOIGD_00311 4.4e-49 pspC KT PspC domain
LNECOIGD_00312 6.3e-224 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
LNECOIGD_00313 2.1e-36 S Enterocin A Immunity
LNECOIGD_00314 3.5e-138 yxeH S hydrolase
LNECOIGD_00315 7.2e-75 S Uncharacterised protein family (UPF0236)
LNECOIGD_00316 7.9e-30 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LNECOIGD_00317 6.3e-36 frnE Q DSBA-like thioredoxin domain
LNECOIGD_00318 8.6e-13 frnE Q DSBA-like thioredoxin domain
LNECOIGD_00319 7.3e-16 frnE Q DSBA-like thioredoxin domain
LNECOIGD_00320 2.2e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LNECOIGD_00321 2.3e-116 M1-798 K Rhodanese Homology Domain
LNECOIGD_00322 6.1e-54 CO Thioredoxin
LNECOIGD_00323 2.1e-20
LNECOIGD_00324 6.8e-72 infB UW LPXTG-motif cell wall anchor domain protein
LNECOIGD_00325 3.2e-64 O Belongs to the peptidase S8 family
LNECOIGD_00326 1.8e-93 O Belongs to the peptidase S8 family
LNECOIGD_00327 2.4e-187 O Belongs to the peptidase S8 family
LNECOIGD_00328 1.3e-55 dhaM 2.7.1.121 S PTS system fructose IIA component
LNECOIGD_00329 3e-91 dhaL 2.7.1.121 S Dak2
LNECOIGD_00330 2.2e-182 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
LNECOIGD_00331 1.3e-296 ytgP S Polysaccharide biosynthesis protein
LNECOIGD_00332 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LNECOIGD_00333 1.3e-119 3.6.1.27 I Acid phosphatase homologues
LNECOIGD_00334 5.3e-149 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LNECOIGD_00335 7e-262 qacA EGP Major facilitator Superfamily
LNECOIGD_00336 2.5e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LNECOIGD_00339 1e-167 psaA P Belongs to the bacterial solute-binding protein 9 family
LNECOIGD_00341 4.9e-116 L COG2963 Transposase and inactivated derivatives
LNECOIGD_00343 1.4e-26
LNECOIGD_00344 5.9e-74 KLT Protein kinase domain
LNECOIGD_00345 6.6e-84 L Transposase IS66 family
LNECOIGD_00346 1.7e-84 L COG2826 Transposase and inactivated derivatives, IS30 family
LNECOIGD_00347 8.7e-131 ybbM S Uncharacterised protein family (UPF0014)
LNECOIGD_00348 5.8e-112 ybbL S ABC transporter, ATP-binding protein
LNECOIGD_00349 3.9e-30 WQ51_00220 K Helix-turn-helix XRE-family like proteins
LNECOIGD_00351 2.4e-154 V ABC transporter transmembrane region
LNECOIGD_00353 2.6e-244 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LNECOIGD_00354 7e-295 3.1.21.5 L Type III restriction enzyme, res subunit
LNECOIGD_00355 8.5e-211 2.1.1.72 L DNA methylAse
LNECOIGD_00356 2.6e-209 L Belongs to the 'phage' integrase family
LNECOIGD_00357 3.5e-28
LNECOIGD_00358 1.6e-165 repB EP Plasmid replication protein
LNECOIGD_00359 3.5e-11
LNECOIGD_00360 2.8e-55 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
LNECOIGD_00362 6.9e-18
LNECOIGD_00365 9.5e-25 cspC K Probable zinc-ribbon domain
LNECOIGD_00366 4.2e-40 V ATPases associated with a variety of cellular activities
LNECOIGD_00367 6.3e-197 V Protein of unknown function DUF262
LNECOIGD_00368 5.1e-157 2.1.1.72 S Adenine-specific methyltransferase EcoRI
LNECOIGD_00370 2.9e-120 yhiD S MgtC family
LNECOIGD_00371 3.1e-239 I Protein of unknown function (DUF2974)
LNECOIGD_00372 1.6e-36
LNECOIGD_00374 1.4e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
LNECOIGD_00375 1.4e-175 degV S DegV family
LNECOIGD_00376 3.3e-164 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
LNECOIGD_00377 1.5e-253 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LNECOIGD_00378 1.1e-67 rplI J Binds to the 23S rRNA
LNECOIGD_00379 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
LNECOIGD_00380 1e-111 S SLAP domain
LNECOIGD_00383 3.7e-48 L An automated process has identified a potential problem with this gene model
LNECOIGD_00384 1e-31 KLT serine threonine protein kinase
LNECOIGD_00385 9.2e-175 V ABC transporter transmembrane region
LNECOIGD_00387 5e-23 repA S Replication initiator protein A
LNECOIGD_00390 2.2e-10
LNECOIGD_00392 7.3e-28
LNECOIGD_00393 7.2e-143 XK27_06780 V ABC transporter permease
LNECOIGD_00394 3.5e-90 XK27_06780 V ABC transporter permease
LNECOIGD_00395 4.3e-89 XK27_06780 V ABC transporter permease
LNECOIGD_00396 3.2e-119 XK27_06785 V ABC transporter, ATP-binding protein
LNECOIGD_00397 6.2e-225 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNECOIGD_00398 6e-157 S Alpha/beta hydrolase of unknown function (DUF915)
LNECOIGD_00399 0.0 clpE O AAA domain (Cdc48 subfamily)
LNECOIGD_00400 3.5e-117 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LNECOIGD_00401 8.2e-129
LNECOIGD_00402 9.6e-216 cycA E Amino acid permease
LNECOIGD_00403 1.9e-245 yifK E Amino acid permease
LNECOIGD_00404 1.5e-14 puuD S peptidase C26
LNECOIGD_00405 3.8e-106 steT_1 E amino acid
LNECOIGD_00406 2e-191 asnA 6.3.1.1 F aspartate--ammonia ligase
LNECOIGD_00407 5.9e-202 4.2.1.126 S Bacterial protein of unknown function (DUF871)
LNECOIGD_00410 1.3e-182 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LNECOIGD_00411 1.6e-246 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LNECOIGD_00412 5.8e-244 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LNECOIGD_00413 6.1e-58
LNECOIGD_00414 2.9e-84
LNECOIGD_00415 3.4e-32 yheS_2 S ATPases associated with a variety of cellular activities
LNECOIGD_00416 1.2e-135 yheS_2 S ATPases associated with a variety of cellular activities
LNECOIGD_00417 1.4e-37 XK27_05540 S DUF218 domain
LNECOIGD_00418 5.5e-133 XK27_05540 S DUF218 domain
LNECOIGD_00419 2e-77
LNECOIGD_00420 1.2e-109
LNECOIGD_00421 7e-68 EG EamA-like transporter family
LNECOIGD_00422 1.2e-74 EG EamA-like transporter family
LNECOIGD_00423 9.5e-83 M NlpC/P60 family
LNECOIGD_00424 4.6e-131 cobQ S glutamine amidotransferase
LNECOIGD_00426 2.1e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LNECOIGD_00427 2.6e-228 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LNECOIGD_00428 3e-147 ptp2 3.1.3.48 T Tyrosine phosphatase family
LNECOIGD_00429 2.5e-175 yvdE K helix_turn _helix lactose operon repressor
LNECOIGD_00430 1e-111 ackA 2.7.2.1 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LNECOIGD_00431 1.3e-50 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LNECOIGD_00432 4.1e-27 L PFAM transposase, IS4 family protein
LNECOIGD_00433 2.1e-288 E Amino acid permease
LNECOIGD_00434 1.1e-183 D Alpha beta
LNECOIGD_00435 1.8e-239 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LNECOIGD_00436 1.3e-22 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LNECOIGD_00437 0.0 bglP G phosphotransferase system
LNECOIGD_00438 4.9e-143 licT K CAT RNA binding domain
LNECOIGD_00439 5.2e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LNECOIGD_00440 1.5e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LNECOIGD_00441 1.8e-117
LNECOIGD_00442 3.8e-148 S Sucrose-6F-phosphate phosphohydrolase
LNECOIGD_00443 2.6e-149 S hydrolase
LNECOIGD_00444 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LNECOIGD_00445 1.4e-170 ybbR S YbbR-like protein
LNECOIGD_00446 1.2e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LNECOIGD_00447 4.4e-205 potD P ABC transporter
LNECOIGD_00448 6.5e-124 potC P ABC transporter permease
LNECOIGD_00449 1.3e-129 potB P ABC transporter permease
LNECOIGD_00450 2.9e-204 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LNECOIGD_00451 4.6e-163 murB 1.3.1.98 M Cell wall formation
LNECOIGD_00452 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
LNECOIGD_00453 2.7e-88 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
LNECOIGD_00454 1.8e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LNECOIGD_00455 3.3e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LNECOIGD_00456 4.8e-157 ycsE S Sucrose-6F-phosphate phosphohydrolase
LNECOIGD_00457 1.8e-95
LNECOIGD_00458 7.6e-143 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LNECOIGD_00459 9.3e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
LNECOIGD_00460 8.4e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LNECOIGD_00461 1.2e-188 cggR K Putative sugar-binding domain
LNECOIGD_00463 2.6e-76
LNECOIGD_00464 1.7e-166
LNECOIGD_00465 3.1e-270 ycaM E amino acid
LNECOIGD_00466 1.5e-133 S haloacid dehalogenase-like hydrolase
LNECOIGD_00467 0.0 S SH3-like domain
LNECOIGD_00471 4.9e-31
LNECOIGD_00472 3.8e-156 I alpha/beta hydrolase fold
LNECOIGD_00473 2.2e-129 yibF S overlaps another CDS with the same product name
LNECOIGD_00474 5.9e-200 yibE S overlaps another CDS with the same product name
LNECOIGD_00475 2.2e-94
LNECOIGD_00476 2.4e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LNECOIGD_00477 3.2e-231 S Cysteine-rich secretory protein family
LNECOIGD_00478 1.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LNECOIGD_00479 1.6e-261 glnPH2 P ABC transporter permease
LNECOIGD_00480 1.2e-116
LNECOIGD_00481 6e-123 luxT K Bacterial regulatory proteins, tetR family
LNECOIGD_00482 1.4e-181 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LNECOIGD_00483 2.5e-55
LNECOIGD_00484 1.5e-115 GM NmrA-like family
LNECOIGD_00485 2.8e-125 S Alpha/beta hydrolase family
LNECOIGD_00486 1.2e-159 epsV 2.7.8.12 S glycosyl transferase family 2
LNECOIGD_00487 2.4e-138 ypuA S Protein of unknown function (DUF1002)
LNECOIGD_00488 3.6e-145 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LNECOIGD_00489 6.8e-178 S Alpha/beta hydrolase of unknown function (DUF915)
LNECOIGD_00490 1.7e-284 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LNECOIGD_00491 3.5e-85
LNECOIGD_00492 2.8e-131 cobB K SIR2 family
LNECOIGD_00493 1e-90 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
LNECOIGD_00494 4.2e-120 terC P Integral membrane protein TerC family
LNECOIGD_00495 4.1e-62 yeaO S Protein of unknown function, DUF488
LNECOIGD_00496 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
LNECOIGD_00497 7.6e-286 glnP P ABC transporter permease
LNECOIGD_00498 4.9e-134 glnQ E ABC transporter, ATP-binding protein
LNECOIGD_00499 4.2e-158 L HNH nucleases
LNECOIGD_00500 6.5e-119 yfbR S HD containing hydrolase-like enzyme
LNECOIGD_00502 9.3e-121 G Glycosyl hydrolases family 8
LNECOIGD_00503 1.7e-25 G Glycosyl hydrolases family 8
LNECOIGD_00504 3.5e-212 ydaM M Glycosyl transferase family group 2
LNECOIGD_00505 8.4e-117
LNECOIGD_00506 1.6e-19
LNECOIGD_00507 1.2e-17
LNECOIGD_00508 1.9e-16 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
LNECOIGD_00509 7.3e-62 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
LNECOIGD_00510 6.1e-36 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
LNECOIGD_00511 5.5e-147 glnH ET ABC transporter
LNECOIGD_00512 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
LNECOIGD_00513 9.9e-146
LNECOIGD_00514 2.2e-309 ybiT S ABC transporter, ATP-binding protein
LNECOIGD_00515 1.1e-208 pepA E M42 glutamyl aminopeptidase
LNECOIGD_00516 5.7e-33 mdtG EGP Major facilitator Superfamily
LNECOIGD_00517 8.6e-168 mdtG EGP Major facilitator Superfamily
LNECOIGD_00518 2.1e-258 emrY EGP Major facilitator Superfamily
LNECOIGD_00519 7.5e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LNECOIGD_00520 1.7e-238 pyrP F Permease
LNECOIGD_00521 7.3e-155 S reductase
LNECOIGD_00522 1.7e-29 2.7.1.191 G phosphoenolpyruvate-dependent sugar phosphotransferase system
LNECOIGD_00523 1.8e-76 2.7.1.191 G PTS system sorbose subfamily IIB component
LNECOIGD_00524 4e-73 G PTS system sorbose-specific iic component
LNECOIGD_00525 3.4e-41 G PTS system sorbose-specific iic component
LNECOIGD_00526 3.6e-143 G PTS system mannose/fructose/sorbose family IID component
LNECOIGD_00527 9.9e-85 2.3.1.128 K acetyltransferase
LNECOIGD_00528 3.5e-154 4.2.1.53 S Myosin-crossreactive antigen
LNECOIGD_00529 2.3e-165 4.2.1.53 S Myosin-crossreactive antigen
LNECOIGD_00530 9.1e-92 yxdD K Bacterial regulatory proteins, tetR family
LNECOIGD_00531 3.1e-241 emrY EGP Major facilitator Superfamily
LNECOIGD_00536 2.1e-96 MA20_25245 K Acetyltransferase (GNAT) domain
LNECOIGD_00537 2.8e-61
LNECOIGD_00538 8.7e-116 L helicase activity
LNECOIGD_00541 1.6e-28 cspA K Cold shock protein
LNECOIGD_00542 3e-259 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
LNECOIGD_00543 1.4e-170 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LNECOIGD_00544 9.8e-258 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LNECOIGD_00545 2.1e-247 nhaC C Na H antiporter NhaC
LNECOIGD_00546 1.6e-46
LNECOIGD_00547 1.1e-119 ybhL S Belongs to the BI1 family
LNECOIGD_00548 9.8e-21 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
LNECOIGD_00549 1.3e-96 E Amino acid permease
LNECOIGD_00550 3.2e-161 E Amino acid permease
LNECOIGD_00551 4.8e-96 L An automated process has identified a potential problem with this gene model
LNECOIGD_00552 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
LNECOIGD_00553 5.5e-247 ynbB 4.4.1.1 P aluminum resistance
LNECOIGD_00554 1.1e-78 ktrA P domain protein
LNECOIGD_00555 2.7e-178 ktrB P Potassium uptake protein
LNECOIGD_00556 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
LNECOIGD_00557 1.7e-78 C Flavodoxin
LNECOIGD_00558 4.4e-112 3.6.1.27 I Acid phosphatase homologues
LNECOIGD_00559 2.7e-106 lacA 2.3.1.79 S Transferase hexapeptide repeat
LNECOIGD_00560 2.2e-207 pbpX1 V Beta-lactamase
LNECOIGD_00561 1.5e-152 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
LNECOIGD_00562 4e-93 S ECF-type riboflavin transporter, S component
LNECOIGD_00563 8.1e-232 S Putative peptidoglycan binding domain
LNECOIGD_00564 3.3e-220 mepA V MATE efflux family protein
LNECOIGD_00565 1e-256 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LNECOIGD_00566 1.9e-33
LNECOIGD_00567 1.4e-29 fic D Fic/DOC family
LNECOIGD_00568 3.3e-23
LNECOIGD_00569 1.2e-294 P ABC transporter
LNECOIGD_00570 1.2e-294 V ABC-type multidrug transport system, ATPase and permease components
LNECOIGD_00571 2.8e-65 S Putative adhesin
LNECOIGD_00572 1.3e-58 ypaA S Protein of unknown function (DUF1304)
LNECOIGD_00573 2.3e-58
LNECOIGD_00574 2.3e-56
LNECOIGD_00575 9.3e-104 S Fic/DOC family
LNECOIGD_00576 1e-102
LNECOIGD_00577 6.1e-208 EGP Major facilitator Superfamily
LNECOIGD_00578 1e-90
LNECOIGD_00579 1.5e-199 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
LNECOIGD_00580 2e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
LNECOIGD_00581 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
LNECOIGD_00582 1e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
LNECOIGD_00583 7.5e-200 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LNECOIGD_00584 9.2e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LNECOIGD_00585 5.3e-69 yqhY S Asp23 family, cell envelope-related function
LNECOIGD_00586 4e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LNECOIGD_00587 4e-153 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LNECOIGD_00588 1.5e-194 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LNECOIGD_00589 2.9e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LNECOIGD_00590 2.1e-157 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LNECOIGD_00591 6.2e-151 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LNECOIGD_00592 9.1e-306 recN L May be involved in recombinational repair of damaged DNA
LNECOIGD_00593 8.4e-78 6.3.3.2 S ASCH
LNECOIGD_00594 1.2e-109 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LNECOIGD_00595 9.4e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LNECOIGD_00596 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LNECOIGD_00597 1.1e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LNECOIGD_00598 4.1e-245 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LNECOIGD_00599 9.2e-147 stp 3.1.3.16 T phosphatase
LNECOIGD_00600 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
LNECOIGD_00601 1.7e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LNECOIGD_00602 9.4e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
LNECOIGD_00603 7.6e-126 thiN 2.7.6.2 H thiamine pyrophosphokinase
LNECOIGD_00604 2.2e-48
LNECOIGD_00605 2.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
LNECOIGD_00606 6.8e-57 asp S Asp23 family, cell envelope-related function
LNECOIGD_00607 2.2e-304 yloV S DAK2 domain fusion protein YloV
LNECOIGD_00608 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LNECOIGD_00609 2.9e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LNECOIGD_00610 9.8e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LNECOIGD_00611 1.7e-193 oppD P Belongs to the ABC transporter superfamily
LNECOIGD_00612 1.2e-180 oppF P Belongs to the ABC transporter superfamily
LNECOIGD_00613 6.6e-176 oppB P ABC transporter permease
LNECOIGD_00614 2.9e-144 oppC P Binding-protein-dependent transport system inner membrane component
LNECOIGD_00615 0.0 oppA E ABC transporter substrate-binding protein
LNECOIGD_00616 0.0 oppA E ABC transporter substrate-binding protein
LNECOIGD_00617 1.3e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LNECOIGD_00618 0.0 smc D Required for chromosome condensation and partitioning
LNECOIGD_00619 1.4e-165 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LNECOIGD_00620 1.7e-289 pipD E Dipeptidase
LNECOIGD_00621 1.8e-44
LNECOIGD_00622 2.1e-258 yfnA E amino acid
LNECOIGD_00623 3.7e-193 L Transposase and inactivated derivatives, IS30 family
LNECOIGD_00624 3.2e-56 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LNECOIGD_00625 1.9e-227 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LNECOIGD_00626 4.5e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LNECOIGD_00627 4.1e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LNECOIGD_00628 1.7e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LNECOIGD_00629 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LNECOIGD_00630 2.1e-120 ung2 3.2.2.27 L Uracil-DNA glycosylase
LNECOIGD_00631 2.1e-148 E GDSL-like Lipase/Acylhydrolase family
LNECOIGD_00632 1.5e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LNECOIGD_00633 4.3e-37 ynzC S UPF0291 protein
LNECOIGD_00634 4.2e-30 yneF S Uncharacterised protein family (UPF0154)
LNECOIGD_00635 3.1e-296 mdlA V ABC transporter
LNECOIGD_00636 1.2e-300 mdlB V ABC transporter
LNECOIGD_00637 0.0 pepO 3.4.24.71 O Peptidase family M13
LNECOIGD_00638 3.2e-225 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
LNECOIGD_00639 3.3e-112 plsC 2.3.1.51 I Acyltransferase
LNECOIGD_00640 3.8e-198 yabB 2.1.1.223 L Methyltransferase small domain
LNECOIGD_00641 1.2e-140 rpsB J Belongs to the universal ribosomal protein uS2 family
LNECOIGD_00642 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LNECOIGD_00643 7e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LNECOIGD_00644 3.4e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LNECOIGD_00645 7.8e-137 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LNECOIGD_00646 1.6e-146 cdsA 2.7.7.41 I Belongs to the CDS family
LNECOIGD_00647 1.5e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
LNECOIGD_00648 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LNECOIGD_00649 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LNECOIGD_00650 5.5e-83 rimP J Required for maturation of 30S ribosomal subunits
LNECOIGD_00651 4.6e-195 nusA K Participates in both transcription termination and antitermination
LNECOIGD_00652 3e-47 ylxR K Protein of unknown function (DUF448)
LNECOIGD_00653 1e-45 rplGA J ribosomal protein
LNECOIGD_00654 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LNECOIGD_00655 3.3e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LNECOIGD_00656 9.8e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LNECOIGD_00657 2.3e-181 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
LNECOIGD_00658 3.9e-66
LNECOIGD_00659 2e-14 K Helix-turn-helix XRE-family like proteins
LNECOIGD_00660 4.9e-128 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LNECOIGD_00661 2.5e-142 K Helix-turn-helix domain
LNECOIGD_00662 1.7e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LNECOIGD_00663 8.4e-218 iscS2 2.8.1.7 E Aminotransferase class V
LNECOIGD_00664 3.2e-282 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LNECOIGD_00665 6.8e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LNECOIGD_00666 3.9e-81 yueI S Protein of unknown function (DUF1694)
LNECOIGD_00667 8e-241 rarA L recombination factor protein RarA
LNECOIGD_00668 2.5e-35
LNECOIGD_00669 2e-77 usp6 T universal stress protein
LNECOIGD_00670 6.8e-215 rodA D Belongs to the SEDS family
LNECOIGD_00671 2.5e-33 S Protein of unknown function (DUF2969)
LNECOIGD_00672 3.8e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
LNECOIGD_00673 1.9e-178 mbl D Cell shape determining protein MreB Mrl
LNECOIGD_00674 5.8e-30 ywzB S Protein of unknown function (DUF1146)
LNECOIGD_00675 2.2e-52 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LNECOIGD_00676 1.9e-232 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LNECOIGD_00677 1.2e-169 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LNECOIGD_00678 2.2e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LNECOIGD_00679 6.8e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LNECOIGD_00680 7.3e-49 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LNECOIGD_00681 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LNECOIGD_00682 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
LNECOIGD_00683 2e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LNECOIGD_00684 3.2e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LNECOIGD_00685 3.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LNECOIGD_00686 1.2e-181 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LNECOIGD_00687 2.2e-113 tdk 2.7.1.21 F thymidine kinase
LNECOIGD_00688 1.8e-248 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
LNECOIGD_00691 4.6e-196 ampC V Beta-lactamase
LNECOIGD_00692 3.7e-42 EGP Major facilitator Superfamily
LNECOIGD_00693 3.9e-155 EGP Major facilitator Superfamily
LNECOIGD_00694 1e-145 sufC O FeS assembly ATPase SufC
LNECOIGD_00695 3.2e-226 sufD O FeS assembly protein SufD
LNECOIGD_00696 1.6e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LNECOIGD_00697 1.5e-80 nifU C SUF system FeS assembly protein, NifU family
LNECOIGD_00698 7.1e-272 sufB O assembly protein SufB
LNECOIGD_00699 6.2e-54 yitW S Iron-sulfur cluster assembly protein
LNECOIGD_00700 5.4e-62 S Enterocin A Immunity
LNECOIGD_00701 2.7e-132 glcR K DeoR C terminal sensor domain
LNECOIGD_00702 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
LNECOIGD_00703 9.9e-160 rssA S Phospholipase, patatin family
LNECOIGD_00704 2.5e-11 2.7.13.3 T GHKL domain
LNECOIGD_00705 2.2e-86 S hydrolase
LNECOIGD_00706 0.0 glvC 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
LNECOIGD_00707 4.7e-103 glvR K Helix-turn-helix domain, rpiR family
LNECOIGD_00708 2.6e-27 glvR K Helix-turn-helix domain, rpiR family
LNECOIGD_00709 7.1e-73
LNECOIGD_00710 4.2e-86 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LNECOIGD_00711 7.4e-40
LNECOIGD_00712 1.9e-08 C nitroreductase
LNECOIGD_00713 1.5e-30 C nitroreductase
LNECOIGD_00714 5e-238 yhdP S Transporter associated domain
LNECOIGD_00715 2.2e-102 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LNECOIGD_00716 8.4e-216 potE E amino acid
LNECOIGD_00717 6.4e-128 M Glycosyl hydrolases family 25
LNECOIGD_00718 3.2e-207 yfmL 3.6.4.13 L DEAD DEAH box helicase
LNECOIGD_00719 3.2e-245 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNECOIGD_00721 2.7e-25
LNECOIGD_00722 5e-215 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LNECOIGD_00723 1.8e-87 gtcA S Teichoic acid glycosylation protein
LNECOIGD_00724 1.6e-79 fld C Flavodoxin
LNECOIGD_00725 1.9e-163 map 3.4.11.18 E Methionine Aminopeptidase
LNECOIGD_00726 8.3e-152 yihY S Belongs to the UPF0761 family
LNECOIGD_00727 1.2e-166 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LNECOIGD_00728 3e-153 S hydrolase
LNECOIGD_00729 7.6e-55 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
LNECOIGD_00730 3.3e-62 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
LNECOIGD_00731 3.7e-17 ropB K Helix-turn-helix domain
LNECOIGD_00732 5.7e-132 gntR K UbiC transcription regulator-associated domain protein
LNECOIGD_00733 4.8e-176 rihB 3.2.2.1 F Nucleoside
LNECOIGD_00734 0.0 kup P Transport of potassium into the cell
LNECOIGD_00735 2.6e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LNECOIGD_00736 1.9e-164 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LNECOIGD_00737 5e-161 2.7.7.12 C Domain of unknown function (DUF4931)
LNECOIGD_00738 9.3e-234 G Bacterial extracellular solute-binding protein
LNECOIGD_00739 2.7e-60 S Bacteriocin helveticin-J
LNECOIGD_00740 2.9e-165 S SLAP domain
LNECOIGD_00741 2.1e-122 K sequence-specific DNA binding
LNECOIGD_00742 2.4e-151 S Protein of unknown function (DUF2974)
LNECOIGD_00743 7.5e-107 glnP P ABC transporter permease
LNECOIGD_00744 5.1e-108 gluC P ABC transporter permease
LNECOIGD_00745 4e-150 glnH ET ABC transporter substrate-binding protein
LNECOIGD_00746 1.3e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LNECOIGD_00747 5.4e-193 L transposase, IS605 OrfB family
LNECOIGD_00748 2.1e-16 L transposase, IS605 OrfB family
LNECOIGD_00749 2e-85 tlpA2 L Transposase IS200 like
LNECOIGD_00750 1.9e-18 udk 2.7.1.48 F Zeta toxin
LNECOIGD_00751 1.3e-81 udk 2.7.1.48 F Zeta toxin
LNECOIGD_00752 4.2e-63 EGP Major facilitator superfamily
LNECOIGD_00753 4.9e-94 EGP Major facilitator superfamily
LNECOIGD_00754 2.4e-101 S ABC-type cobalt transport system, permease component
LNECOIGD_00755 0.0 V ABC transporter transmembrane region
LNECOIGD_00756 5e-291 XK27_09600 V ABC transporter, ATP-binding protein
LNECOIGD_00757 2.2e-79 K Transcriptional regulator, MarR family
LNECOIGD_00758 7.9e-76 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LNECOIGD_00759 2.9e-38 L Transposase and inactivated derivatives
LNECOIGD_00760 1.3e-156 L Integrase core domain
LNECOIGD_00761 3.2e-69 S Membrane transport protein
LNECOIGD_00762 9.3e-149 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNECOIGD_00763 2e-13 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
LNECOIGD_00764 8.9e-75 tnpR L Resolvase, N terminal domain
LNECOIGD_00765 5.3e-130 S Phage Mu protein F like protein
LNECOIGD_00766 1.2e-12 ytgB S Transglycosylase associated protein
LNECOIGD_00767 7.5e-123 tnp L DDE domain
LNECOIGD_00768 3.4e-56 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
LNECOIGD_00769 1.4e-124 L Transposase DDE domain
LNECOIGD_00772 7.6e-157 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LNECOIGD_00773 7e-162 dnaQ 2.7.7.7 L EXOIII
LNECOIGD_00774 8.5e-159 endA F DNA RNA non-specific endonuclease
LNECOIGD_00775 5e-281 pipD E Dipeptidase
LNECOIGD_00776 3.9e-201 malK P ATPases associated with a variety of cellular activities
LNECOIGD_00777 2.1e-157 gtsB P ABC-type sugar transport systems, permease components
LNECOIGD_00778 4.7e-146 gtsC P Binding-protein-dependent transport system inner membrane component
LNECOIGD_00779 2.3e-256 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
LNECOIGD_00780 1.8e-240 G Bacterial extracellular solute-binding protein
LNECOIGD_00781 5.3e-159 corA P CorA-like Mg2+ transporter protein
LNECOIGD_00782 1e-157 3.5.2.6 V Beta-lactamase enzyme family
LNECOIGD_00783 3.3e-98 yobS K Bacterial regulatory proteins, tetR family
LNECOIGD_00784 7e-24 ydgH S MMPL family
LNECOIGD_00785 9.4e-139 ydgH S MMPL family
LNECOIGD_00786 7.2e-135 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNECOIGD_00787 1.2e-276 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LNECOIGD_00788 2e-80 ypbG 2.7.1.2 GK ROK family
LNECOIGD_00789 7.7e-11 ypbG 2.7.1.2 GK ROK family
LNECOIGD_00790 1.6e-85 C nitroreductase
LNECOIGD_00791 1.7e-65 S Domain of unknown function (DUF4767)
LNECOIGD_00792 1.2e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LNECOIGD_00793 6.6e-132 yitS S Uncharacterised protein, DegV family COG1307
LNECOIGD_00794 2.3e-99 3.6.1.27 I Acid phosphatase homologues
LNECOIGD_00795 2.5e-31 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LNECOIGD_00796 1.2e-20 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LNECOIGD_00797 3.9e-58 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LNECOIGD_00799 5e-57 S PFAM Uncharacterised protein family UPF0150
LNECOIGD_00800 3.4e-250 yifK E Amino acid permease
LNECOIGD_00801 5.7e-188 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LNECOIGD_00802 2.4e-95 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LNECOIGD_00803 7.2e-16 ps301 K sequence-specific DNA binding
LNECOIGD_00804 0.0 aha1 P E1-E2 ATPase
LNECOIGD_00805 2.2e-162 metQ1 P Belongs to the nlpA lipoprotein family
LNECOIGD_00806 1.5e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LNECOIGD_00807 8.4e-88 metI P ABC transporter permease
LNECOIGD_00808 1.9e-188 S cog cog1373
LNECOIGD_00809 1.7e-34
LNECOIGD_00810 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
LNECOIGD_00811 3.5e-263 frdC 1.3.5.4 C FAD binding domain
LNECOIGD_00812 1.1e-109 M domain protein
LNECOIGD_00813 7.3e-14 M domain protein
LNECOIGD_00814 6.7e-127 S YSIRK type signal peptide
LNECOIGD_00815 6.7e-224 pbuG S permease
LNECOIGD_00816 2.3e-35
LNECOIGD_00817 2.7e-76 atkY K Penicillinase repressor
LNECOIGD_00818 1.2e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LNECOIGD_00819 1.4e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LNECOIGD_00820 0.0 copA 3.6.3.54 P P-type ATPase
LNECOIGD_00821 5.6e-17 EGP Sugar (and other) transporter
LNECOIGD_00822 2.2e-38 EGP Sugar (and other) transporter
LNECOIGD_00823 8.5e-81 EGP Sugar (and other) transporter
LNECOIGD_00824 1.2e-18
LNECOIGD_00825 7.2e-211
LNECOIGD_00826 1.6e-280 clcA P chloride
LNECOIGD_00827 1.1e-269 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LNECOIGD_00828 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LNECOIGD_00829 6.2e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LNECOIGD_00830 1.9e-142 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LNECOIGD_00831 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LNECOIGD_00832 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
LNECOIGD_00833 4.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LNECOIGD_00834 3.9e-196 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LNECOIGD_00835 1.7e-34 yaaA S S4 domain protein YaaA
LNECOIGD_00836 9e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LNECOIGD_00837 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LNECOIGD_00838 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LNECOIGD_00839 4.2e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
LNECOIGD_00840 9e-79 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LNECOIGD_00841 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LNECOIGD_00842 9.9e-266 S Fibronectin type III domain
LNECOIGD_00843 1.3e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LNECOIGD_00844 5.4e-21
LNECOIGD_00846 6.1e-257 pepC 3.4.22.40 E aminopeptidase
LNECOIGD_00847 2.1e-117 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
LNECOIGD_00848 2.2e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LNECOIGD_00849 8.8e-256 pepC 3.4.22.40 E aminopeptidase
LNECOIGD_00850 2.6e-68 hsp O Belongs to the small heat shock protein (HSP20) family
LNECOIGD_00851 1.8e-75 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LNECOIGD_00852 4.9e-114
LNECOIGD_00854 2.6e-114 E Belongs to the SOS response-associated peptidase family
LNECOIGD_00855 1.1e-192 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
LNECOIGD_00856 5.5e-91 comEB 3.5.4.12 F MafB19-like deaminase
LNECOIGD_00857 4.6e-109 S TPM domain
LNECOIGD_00858 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LNECOIGD_00859 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LNECOIGD_00860 1e-147 tatD L hydrolase, TatD family
LNECOIGD_00861 1.9e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LNECOIGD_00862 2.1e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LNECOIGD_00863 5e-38 veg S Biofilm formation stimulator VEG
LNECOIGD_00864 2.2e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
LNECOIGD_00865 2.1e-207 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LNECOIGD_00866 1.1e-104 S SLAP domain
LNECOIGD_00867 9e-14
LNECOIGD_00868 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LNECOIGD_00869 1.3e-156 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LNECOIGD_00870 1.4e-104 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LNECOIGD_00871 4.1e-83 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LNECOIGD_00872 2.6e-247 dnaB L Replication initiation and membrane attachment
LNECOIGD_00873 1.7e-165 dnaI L Primosomal protein DnaI
LNECOIGD_00874 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LNECOIGD_00875 1.5e-89
LNECOIGD_00876 4.1e-95
LNECOIGD_00877 2.9e-184 S Domain of unknown function (DUF389)
LNECOIGD_00878 9.3e-30 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
LNECOIGD_00879 5.2e-139 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
LNECOIGD_00880 8.9e-37 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
LNECOIGD_00881 1.8e-54 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LNECOIGD_00882 1.8e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
LNECOIGD_00883 5.1e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LNECOIGD_00884 3.8e-93 yqeG S HAD phosphatase, family IIIA
LNECOIGD_00885 4.3e-211 yqeH S Ribosome biogenesis GTPase YqeH
LNECOIGD_00886 2.4e-121 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LNECOIGD_00887 2.3e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
LNECOIGD_00888 6.9e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LNECOIGD_00889 6.6e-215 ylbM S Belongs to the UPF0348 family
LNECOIGD_00890 1e-96 yceD S Uncharacterized ACR, COG1399
LNECOIGD_00891 3.2e-127 K response regulator
LNECOIGD_00892 1e-279 arlS 2.7.13.3 T Histidine kinase
LNECOIGD_00893 2.7e-148
LNECOIGD_00894 7.1e-164
LNECOIGD_00895 1.8e-135
LNECOIGD_00896 1.5e-263 glnA 6.3.1.2 E glutamine synthetase
LNECOIGD_00897 5.1e-170 ynbB 4.4.1.1 P aluminum resistance
LNECOIGD_00898 2.6e-30 ynbB 4.4.1.1 P aluminum resistance
LNECOIGD_00899 3.9e-170 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LNECOIGD_00900 4.5e-70 yqhL P Rhodanese-like protein
LNECOIGD_00901 5.6e-33 yqgQ S Bacterial protein of unknown function (DUF910)
LNECOIGD_00902 1.3e-114 gluP 3.4.21.105 S Rhomboid family
LNECOIGD_00903 6.5e-99 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LNECOIGD_00904 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LNECOIGD_00905 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
LNECOIGD_00906 0.0 S membrane
LNECOIGD_00907 1.5e-169 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
LNECOIGD_00908 9e-38 K Helix-turn-helix domain
LNECOIGD_00909 2.8e-26 S Phage derived protein Gp49-like (DUF891)
LNECOIGD_00910 1.6e-168 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
LNECOIGD_00911 9.2e-62 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LNECOIGD_00912 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LNECOIGD_00913 2e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LNECOIGD_00914 1.5e-61 yodB K Transcriptional regulator, HxlR family
LNECOIGD_00915 3.1e-136 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LNECOIGD_00916 4.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
LNECOIGD_00917 4.9e-155 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LNECOIGD_00918 1e-84 S Aminoacyl-tRNA editing domain
LNECOIGD_00919 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
LNECOIGD_00920 4.3e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LNECOIGD_00921 1.6e-100 S Iron-sulfur cluster assembly protein
LNECOIGD_00922 7.5e-230 XK27_04775 S PAS domain
LNECOIGD_00923 5.7e-225 yttB EGP Major facilitator Superfamily
LNECOIGD_00924 0.0 pepO 3.4.24.71 O Peptidase family M13
LNECOIGD_00925 0.0 kup P Transport of potassium into the cell
LNECOIGD_00926 5.1e-82
LNECOIGD_00928 1e-28
LNECOIGD_00929 2.2e-36 S Protein of unknown function (DUF2922)
LNECOIGD_00930 1.9e-170 S SLAP domain
LNECOIGD_00932 1.1e-12 K DNA-templated transcription, initiation
LNECOIGD_00933 7.1e-26 K DNA-templated transcription, initiation
LNECOIGD_00934 1.3e-98
LNECOIGD_00935 1.6e-219 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LNECOIGD_00936 1.3e-209 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
LNECOIGD_00937 0.0 yjbQ P TrkA C-terminal domain protein
LNECOIGD_00938 1.1e-24 gepA K Protein of unknown function (DUF4065)
LNECOIGD_00939 1.4e-91 gepA K Protein of unknown function (DUF4065)
LNECOIGD_00940 8.3e-179 S Oxidoreductase family, NAD-binding Rossmann fold
LNECOIGD_00941 1.5e-46
LNECOIGD_00942 4.5e-54
LNECOIGD_00943 6.1e-102 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
LNECOIGD_00944 3e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LNECOIGD_00945 1.6e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LNECOIGD_00946 3.5e-274 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
LNECOIGD_00947 7.9e-76 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LNECOIGD_00948 7.8e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LNECOIGD_00949 2.7e-94 sigH K Belongs to the sigma-70 factor family
LNECOIGD_00950 8.3e-34
LNECOIGD_00951 1.3e-282 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
LNECOIGD_00952 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LNECOIGD_00953 5.9e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LNECOIGD_00954 6.9e-101 nusG K Participates in transcription elongation, termination and antitermination
LNECOIGD_00955 6.9e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LNECOIGD_00956 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LNECOIGD_00957 5.2e-156 pstS P Phosphate
LNECOIGD_00958 1.9e-173 pstC P probably responsible for the translocation of the substrate across the membrane
LNECOIGD_00959 7e-156 pstA P Phosphate transport system permease protein PstA
LNECOIGD_00960 9.3e-144 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LNECOIGD_00961 7.8e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LNECOIGD_00962 7.5e-118 phoU P Plays a role in the regulation of phosphate uptake
LNECOIGD_00963 4.1e-10 yfdV S Membrane transport protein
LNECOIGD_00964 4.8e-155 yfdV S Membrane transport protein
LNECOIGD_00965 3.5e-83 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LNECOIGD_00966 1.6e-53 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LNECOIGD_00967 9e-83 rsmC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
LNECOIGD_00968 7.7e-117 rsmC 2.1.1.172 J Methyltransferase
LNECOIGD_00969 6.9e-92 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LNECOIGD_00970 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LNECOIGD_00971 5e-38 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LNECOIGD_00972 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LNECOIGD_00973 2.6e-33 S Protein of unknown function (DUF2508)
LNECOIGD_00974 8.7e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LNECOIGD_00975 4.9e-51 yaaQ S Cyclic-di-AMP receptor
LNECOIGD_00976 1.7e-154 holB 2.7.7.7 L DNA polymerase III
LNECOIGD_00977 4.5e-58 yabA L Involved in initiation control of chromosome replication
LNECOIGD_00978 2.2e-154 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LNECOIGD_00979 4.7e-142 fat 3.1.2.21 I Acyl-ACP thioesterase
LNECOIGD_00980 6.9e-87 S ECF transporter, substrate-specific component
LNECOIGD_00981 5e-131 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
LNECOIGD_00982 1.7e-102 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
LNECOIGD_00983 6.2e-196 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LNECOIGD_00984 2.8e-123 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LNECOIGD_00985 8.9e-181 S Oxidoreductase family, NAD-binding Rossmann fold
LNECOIGD_00986 2e-129 K UTRA
LNECOIGD_00987 4.1e-28 S Toxin ToxN, type III toxin-antitoxin system
LNECOIGD_00988 3.7e-111 yfdE 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LNECOIGD_00989 9e-108 yfdE 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LNECOIGD_00990 1.2e-112 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LNECOIGD_00991 8.6e-38 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
LNECOIGD_00992 1.4e-216 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
LNECOIGD_00993 1.4e-12 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
LNECOIGD_00994 0.0 uup S ABC transporter, ATP-binding protein
LNECOIGD_00995 5.7e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LNECOIGD_00996 9.6e-77 XK27_02470 K LytTr DNA-binding domain
LNECOIGD_00997 2.5e-122 liaI S membrane
LNECOIGD_00998 3.1e-181 scrR K Transcriptional regulator, LacI family
LNECOIGD_00999 3.2e-230 scrB 3.2.1.26 GH32 G invertase
LNECOIGD_01000 0.0 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
LNECOIGD_01001 3.9e-47
LNECOIGD_01002 7.4e-89
LNECOIGD_01003 3e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LNECOIGD_01004 9.4e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LNECOIGD_01005 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LNECOIGD_01006 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LNECOIGD_01007 4.6e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LNECOIGD_01008 2.8e-185 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LNECOIGD_01009 2.9e-35 yajC U Preprotein translocase
LNECOIGD_01010 4.2e-283 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LNECOIGD_01011 1.3e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LNECOIGD_01012 3e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
LNECOIGD_01013 4.4e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LNECOIGD_01014 7.1e-64
LNECOIGD_01015 1.3e-82
LNECOIGD_01016 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LNECOIGD_01017 2e-42 yrzL S Belongs to the UPF0297 family
LNECOIGD_01018 1e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LNECOIGD_01019 6.2e-51 yrzB S Belongs to the UPF0473 family
LNECOIGD_01020 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LNECOIGD_01021 1.3e-53 trxA O Belongs to the thioredoxin family
LNECOIGD_01022 4.1e-38 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LNECOIGD_01023 8.5e-69 yslB S Protein of unknown function (DUF2507)
LNECOIGD_01024 7.7e-146 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LNECOIGD_01025 7.1e-115 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LNECOIGD_01026 4.6e-149 ykuT M mechanosensitive ion channel
LNECOIGD_01027 3.3e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LNECOIGD_01028 1.8e-44
LNECOIGD_01031 2.3e-156 ropB K Transcriptional regulator
LNECOIGD_01032 8.7e-205 XK27_02480 EGP Major facilitator Superfamily
LNECOIGD_01033 4e-13 sagD S ATP diphosphatase activity
LNECOIGD_01034 7.4e-19
LNECOIGD_01035 1.1e-80 GM NAD(P)H-binding
LNECOIGD_01036 3.2e-121 C Aldo keto reductase
LNECOIGD_01037 1.6e-136 akr5f 1.1.1.346 S reductase
LNECOIGD_01038 1.7e-34 S Domain of unknown function (DUF4440)
LNECOIGD_01039 2.2e-10 K Bacterial regulatory proteins, tetR family
LNECOIGD_01040 4.9e-43 K Bacterial regulatory proteins, tetR family
LNECOIGD_01041 2.6e-273 ytgP S Polysaccharide biosynthesis protein
LNECOIGD_01042 3.4e-148 lysA2 M Glycosyl hydrolases family 25
LNECOIGD_01043 2.5e-121 S Protein of unknown function (DUF975)
LNECOIGD_01044 9.6e-16
LNECOIGD_01045 1.3e-48
LNECOIGD_01046 1.7e-29
LNECOIGD_01047 3.2e-119 S CAAX protease self-immunity
LNECOIGD_01048 4.1e-11
LNECOIGD_01050 7.9e-174 pbpX2 V Beta-lactamase
LNECOIGD_01051 2.5e-239 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LNECOIGD_01052 1.3e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNECOIGD_01053 2.8e-235 dltB M MBOAT, membrane-bound O-acyltransferase family
LNECOIGD_01054 1.3e-290 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNECOIGD_01055 2.6e-18 S D-Ala-teichoic acid biosynthesis protein
LNECOIGD_01056 3.2e-49
LNECOIGD_01057 7.9e-213 ywhK S Membrane
LNECOIGD_01058 2.4e-23 ykuL S IMP dehydrogenase activity
LNECOIGD_01059 2e-08
LNECOIGD_01060 3e-237 S Domain of unknown function (DUF3883)
LNECOIGD_01061 1.6e-219 S SLAP domain
LNECOIGD_01063 3.2e-30
LNECOIGD_01065 3e-26
LNECOIGD_01066 6e-114 G Peptidase_C39 like family
LNECOIGD_01067 7.3e-94 M NlpC/P60 family
LNECOIGD_01068 9.5e-23 M NlpC/P60 family
LNECOIGD_01069 4.3e-12 M NlpC/P60 family
LNECOIGD_01071 8.2e-54 S Iron-sulfur cluster assembly protein
LNECOIGD_01072 1.3e-146 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
LNECOIGD_01073 3.4e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
LNECOIGD_01074 1.5e-46
LNECOIGD_01075 1.1e-40
LNECOIGD_01076 8.4e-208 G Major Facilitator Superfamily
LNECOIGD_01077 0.0 3.6.3.8 P P-type ATPase
LNECOIGD_01078 1.7e-160 yufQ S Belongs to the binding-protein-dependent transport system permease family
LNECOIGD_01079 1.7e-167 yufP S Belongs to the binding-protein-dependent transport system permease family
LNECOIGD_01080 1.4e-247 xylG 3.6.3.17 S ABC transporter
LNECOIGD_01081 7.7e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
LNECOIGD_01082 4.6e-23 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
LNECOIGD_01083 8.5e-37 2.4.2.6 F nucleoside 2-deoxyribosyltransferase
LNECOIGD_01086 1.1e-148 ydiM G Major facilitator superfamily
LNECOIGD_01088 6.1e-72 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LNECOIGD_01089 4.7e-115 S Protein of unknown function (DUF1211)
LNECOIGD_01090 3e-170 yegS 2.7.1.107 G Lipid kinase
LNECOIGD_01091 1.4e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LNECOIGD_01092 2.2e-260 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LNECOIGD_01093 5.2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LNECOIGD_01094 3e-207 camS S sex pheromone
LNECOIGD_01095 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LNECOIGD_01096 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
LNECOIGD_01097 2e-104 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
LNECOIGD_01099 1.1e-86 ydcK S Belongs to the SprT family
LNECOIGD_01100 1.7e-136 M Glycosyltransferase sugar-binding region containing DXD motif
LNECOIGD_01101 2.4e-259 epsU S Polysaccharide biosynthesis protein
LNECOIGD_01102 2.1e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
LNECOIGD_01103 0.0 pacL 3.6.3.8 P P-type ATPase
LNECOIGD_01104 1.5e-61 pacL 3.6.3.8 P P-type ATPase
LNECOIGD_01105 6.7e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LNECOIGD_01106 2.6e-280 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LNECOIGD_01107 5.9e-205 csaB M Glycosyl transferases group 1
LNECOIGD_01108 5.6e-135 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
LNECOIGD_01109 7.6e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LNECOIGD_01110 2.6e-307 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LNECOIGD_01111 2.5e-22 S Protein of unknown function (DUF2929)
LNECOIGD_01112 0.0 dnaE 2.7.7.7 L DNA polymerase
LNECOIGD_01113 6.6e-184 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LNECOIGD_01114 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
LNECOIGD_01115 5.5e-169 cvfB S S1 domain
LNECOIGD_01116 4e-167 xerD D recombinase XerD
LNECOIGD_01117 4.9e-60 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNECOIGD_01118 7.2e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LNECOIGD_01119 9.2e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LNECOIGD_01120 8.5e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LNECOIGD_01121 1.2e-115 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LNECOIGD_01122 3.4e-29 yocH M Lysin motif
LNECOIGD_01123 4.5e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
LNECOIGD_01124 9.1e-207 rpsA 1.17.7.4 J Ribosomal protein S1
LNECOIGD_01125 1.1e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
LNECOIGD_01126 3.9e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LNECOIGD_01127 1.7e-229 S Tetratricopeptide repeat protein
LNECOIGD_01128 5.2e-159 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LNECOIGD_01129 7.8e-227 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LNECOIGD_01130 1.3e-88 S membrane transporter protein
LNECOIGD_01131 9.8e-14 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LNECOIGD_01132 2.4e-66 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LNECOIGD_01133 3e-107 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
LNECOIGD_01134 5.5e-47 S Protein of unknown function (DUF805)
LNECOIGD_01135 1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
LNECOIGD_01136 1.3e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LNECOIGD_01137 6e-143 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LNECOIGD_01138 1.8e-139 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LNECOIGD_01139 4e-150 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LNECOIGD_01140 1.7e-151 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LNECOIGD_01141 1.4e-60 rplQ J Ribosomal protein L17
LNECOIGD_01142 1.8e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNECOIGD_01143 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LNECOIGD_01144 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LNECOIGD_01145 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LNECOIGD_01146 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LNECOIGD_01147 2.7e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LNECOIGD_01148 4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LNECOIGD_01149 1.5e-71 rplO J Binds to the 23S rRNA
LNECOIGD_01150 2.3e-24 rpmD J Ribosomal protein L30
LNECOIGD_01151 1.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LNECOIGD_01152 2.8e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LNECOIGD_01153 9.5e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LNECOIGD_01154 7.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LNECOIGD_01155 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LNECOIGD_01156 3.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LNECOIGD_01157 1.7e-32 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LNECOIGD_01158 1.5e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LNECOIGD_01159 1.5e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LNECOIGD_01160 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
LNECOIGD_01161 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LNECOIGD_01162 5.4e-108 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LNECOIGD_01163 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LNECOIGD_01164 9.3e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LNECOIGD_01165 4.7e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LNECOIGD_01166 4.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LNECOIGD_01167 2.3e-105 rplD J Forms part of the polypeptide exit tunnel
LNECOIGD_01168 4.4e-112 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LNECOIGD_01169 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
LNECOIGD_01170 4.4e-135 2.7.1.89 M Phosphotransferase enzyme family
LNECOIGD_01171 8.5e-90 S AAA domain
LNECOIGD_01173 6.6e-96 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
LNECOIGD_01174 3.3e-57 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
LNECOIGD_01175 2.5e-99 XK27_07525 3.6.1.55 F NUDIX domain
LNECOIGD_01176 2.3e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
LNECOIGD_01177 2.9e-47
LNECOIGD_01178 2.3e-43 glcU U sugar transport
LNECOIGD_01179 6.2e-83 glcU U sugar transport
LNECOIGD_01180 2.2e-107 S Domain of unknown function (DUF4411)
LNECOIGD_01181 6.9e-220 E IrrE N-terminal-like domain
LNECOIGD_01182 5.6e-08 yfdK S phosphatase homologous to the C-terminal domain of histone macroH2A1
LNECOIGD_01183 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
LNECOIGD_01184 9.3e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LNECOIGD_01185 1.4e-242 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LNECOIGD_01186 1.2e-180 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LNECOIGD_01187 1.1e-92 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LNECOIGD_01188 7.7e-166 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LNECOIGD_01189 2.9e-120 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LNECOIGD_01190 8.7e-113 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LNECOIGD_01191 2.2e-174 S cog cog1373
LNECOIGD_01192 4.8e-230 pbuG S permease
LNECOIGD_01193 1.1e-144 cof S haloacid dehalogenase-like hydrolase
LNECOIGD_01194 1.8e-127 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LNECOIGD_01195 2.7e-117 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LNECOIGD_01197 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNECOIGD_01198 1.5e-121 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LNECOIGD_01199 2.6e-13 yfeW 3.4.16.4 V Beta-lactamase
LNECOIGD_01200 1.1e-158 yfeW 3.4.16.4 V Beta-lactamase
LNECOIGD_01201 8.5e-145 S Bacterial protein of unknown function (DUF871)
LNECOIGD_01202 6.1e-101 ybbH_2 K rpiR family
LNECOIGD_01203 3.9e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LNECOIGD_01204 2.2e-159 yeaE S Aldo/keto reductase family
LNECOIGD_01205 3.2e-96 S ECF transporter, substrate-specific component
LNECOIGD_01206 0.0 macB_3 V ABC transporter, ATP-binding protein
LNECOIGD_01207 1.9e-195 S DUF218 domain
LNECOIGD_01208 2.1e-117 S CAAX protease self-immunity
LNECOIGD_01209 1.2e-09
LNECOIGD_01210 2.1e-71 yeaL S Protein of unknown function (DUF441)
LNECOIGD_01211 8.4e-77 M1-431 S Protein of unknown function (DUF1706)
LNECOIGD_01212 2.8e-91
LNECOIGD_01213 2.1e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
LNECOIGD_01214 8.2e-168 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
LNECOIGD_01215 9.1e-44 citD C Covalent carrier of the coenzyme of citrate lyase
LNECOIGD_01216 2.1e-196 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
LNECOIGD_01217 1.5e-88 ydjP I Alpha/beta hydrolase family
LNECOIGD_01218 4.2e-52 ydjP I Alpha/beta hydrolase family
LNECOIGD_01219 4.4e-272 P Sodium:sulfate symporter transmembrane region
LNECOIGD_01220 7.2e-258 pepC 3.4.22.40 E Peptidase C1-like family
LNECOIGD_01221 1.2e-43
LNECOIGD_01222 2.1e-43
LNECOIGD_01223 6.4e-74 fhaB M Rib/alpha-like repeat
LNECOIGD_01224 3.7e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LNECOIGD_01226 2.3e-30 3.5.1.28 UW LPXTG-motif cell wall anchor domain protein
LNECOIGD_01227 1.7e-42 UW LPXTG-motif cell wall anchor domain protein
LNECOIGD_01228 3e-10 UW LPXTG-motif cell wall anchor domain protein
LNECOIGD_01229 9e-26 UW LPXTG-motif cell wall anchor domain protein
LNECOIGD_01233 6.6e-125 3.6.3.44 V ABC transporter transmembrane region
LNECOIGD_01234 7.9e-28 S amino acid activation for nonribosomal peptide biosynthetic process
LNECOIGD_01235 2.4e-74
LNECOIGD_01236 5.9e-106 K LysR substrate binding domain
LNECOIGD_01237 2.5e-19
LNECOIGD_01238 3.7e-213 S Sterol carrier protein domain
LNECOIGD_01239 8.4e-96 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
LNECOIGD_01240 2.8e-52 arcC 2.7.2.2 E Belongs to the carbamate kinase family
LNECOIGD_01241 1.4e-69 arcC 2.7.2.2 E Belongs to the carbamate kinase family
LNECOIGD_01242 1.5e-144 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LNECOIGD_01243 1.1e-12 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LNECOIGD_01244 7.1e-90 arcA 3.5.3.6 E Arginine
LNECOIGD_01245 7.3e-57 arcA 3.5.3.6 E Arginine
LNECOIGD_01246 3.2e-26 arcA 3.5.3.6 E Arginine
LNECOIGD_01247 5.1e-156 lysR5 K LysR substrate binding domain
LNECOIGD_01248 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
LNECOIGD_01249 2.4e-84 3.4.21.96 S SLAP domain
LNECOIGD_01250 2.7e-253 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LNECOIGD_01251 1.6e-151 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
LNECOIGD_01252 2.4e-159 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
LNECOIGD_01253 3.8e-84 L Integrase
LNECOIGD_01254 1.9e-96 K Transcriptional regulator, AbiEi antitoxin
LNECOIGD_01255 4.9e-86 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
LNECOIGD_01256 4.6e-45 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
LNECOIGD_01257 1.2e-58 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
LNECOIGD_01259 1.1e-28 S HicB family
LNECOIGD_01260 2.2e-32 S Biotin synthase
LNECOIGD_01261 2.9e-62 4.2.99.20 S Alpha/beta hydrolase family
LNECOIGD_01262 9.3e-25 I carboxylic ester hydrolase activity
LNECOIGD_01263 2.8e-87 S Membrane
LNECOIGD_01264 1.2e-48 S Membrane
LNECOIGD_01265 6.5e-124 C Zinc-binding dehydrogenase
LNECOIGD_01266 1e-141 proX M ABC transporter, substrate-binding protein, QAT family
LNECOIGD_01267 7e-89 proWZ P ABC transporter permease
LNECOIGD_01268 2.5e-109 proV E ABC transporter, ATP-binding protein
LNECOIGD_01269 8.5e-87 proW P ABC transporter, permease protein
LNECOIGD_01270 1.3e-60 yyaQ S YjbR
LNECOIGD_01271 6.9e-07 S ParE toxin of type II toxin-antitoxin system, parDE
LNECOIGD_01272 2.2e-63 mta K helix_turn_helix, mercury resistance
LNECOIGD_01273 3e-38 mta K helix_turn_helix, mercury resistance
LNECOIGD_01274 2e-94 yyaR K Acetyltransferase (GNAT) domain
LNECOIGD_01275 0.0 uvrA3 L excinuclease ABC, A subunit
LNECOIGD_01278 1.5e-104 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
LNECOIGD_01279 6.6e-75 K LytTr DNA-binding domain
LNECOIGD_01280 1.9e-74 S Protein of unknown function (DUF3021)
LNECOIGD_01281 8e-237 S Protein of unknown function DUF262
LNECOIGD_01282 2.2e-105 S Putative inner membrane protein (DUF1819)
LNECOIGD_01283 6e-111 S Domain of unknown function (DUF1788)
LNECOIGD_01284 6.2e-214 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
LNECOIGD_01285 0.0 2.1.1.72 LV Eco57I restriction-modification methylase
LNECOIGD_01286 9.5e-45
LNECOIGD_01287 5.4e-32 S Abortive infection C-terminus
LNECOIGD_01288 0.0 S PglZ domain
LNECOIGD_01289 0.0
LNECOIGD_01290 1.1e-30 L PFAM transposase, IS4 family protein
LNECOIGD_01291 2.9e-49 L PFAM transposase, IS4 family protein
LNECOIGD_01292 1.9e-21 yfjM S Protein of unknown function DUF262
LNECOIGD_01293 0.0 yfjM S Protein of unknown function DUF262
LNECOIGD_01294 3.1e-159 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LNECOIGD_01295 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
LNECOIGD_01296 6.8e-72 XK27_11280 S Psort location CytoplasmicMembrane, score
LNECOIGD_01297 3.2e-215 XK27_11280 S Psort location CytoplasmicMembrane, score
LNECOIGD_01298 8.2e-89 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LNECOIGD_01299 6.6e-73 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LNECOIGD_01300 0.0 pepO 3.4.24.71 O Peptidase family M13
LNECOIGD_01301 3.3e-59 pdxH S Pyridoxamine 5'-phosphate oxidase
LNECOIGD_01302 4e-232 steT E amino acid
LNECOIGD_01303 6.3e-229 amd 3.5.1.47 E Peptidase family M20/M25/M40
LNECOIGD_01304 5.3e-184 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
LNECOIGD_01305 2.5e-229 mmuP E amino acid
LNECOIGD_01306 7.8e-238 N Uncharacterized conserved protein (DUF2075)
LNECOIGD_01307 3e-211 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
LNECOIGD_01308 8.7e-204
LNECOIGD_01309 7.1e-257 S C4-dicarboxylate anaerobic carrier
LNECOIGD_01310 7.4e-92 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LNECOIGD_01311 4.7e-102 S LexA-binding, inner membrane-associated putative hydrolase
LNECOIGD_01312 3e-37
LNECOIGD_01313 2.1e-121 malY 4.4.1.8 E Aminotransferase, class I
LNECOIGD_01314 1.2e-37 malY 4.4.1.8 E Aminotransferase, class I
LNECOIGD_01315 2.6e-55
LNECOIGD_01316 2.9e-241 brnQ U Component of the transport system for branched-chain amino acids
LNECOIGD_01317 2e-68 S Protein of unknown function (DUF554)
LNECOIGD_01318 1.2e-13 S Protein of unknown function (DUF554)
LNECOIGD_01319 4.5e-45 K LysR substrate binding domain
LNECOIGD_01320 1.9e-243 ubiX 2.5.1.129, 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
LNECOIGD_01322 5e-16 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
LNECOIGD_01323 1.9e-21
LNECOIGD_01324 3.7e-82 tdh 1.1.1.14 C Zinc-binding dehydrogenase
LNECOIGD_01325 7.7e-88 tdh 1.1.1.14 C Zinc-binding dehydrogenase
LNECOIGD_01327 3.8e-68 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
LNECOIGD_01328 3e-68 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
LNECOIGD_01329 1.4e-43 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
LNECOIGD_01330 1.1e-272 pepV 3.5.1.18 E dipeptidase PepV
LNECOIGD_01331 5.3e-189 V Beta-lactamase
LNECOIGD_01332 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LNECOIGD_01333 5.4e-95 nqr 1.5.1.36 S NADPH-dependent FMN reductase
LNECOIGD_01334 3.5e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
LNECOIGD_01335 2.8e-148 3.1.3.48 T Tyrosine phosphatase family
LNECOIGD_01336 5.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LNECOIGD_01337 7.3e-84 cvpA S Colicin V production protein
LNECOIGD_01338 1.8e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
LNECOIGD_01339 3.9e-148 noc K Belongs to the ParB family
LNECOIGD_01340 1.9e-136 soj D Sporulation initiation inhibitor
LNECOIGD_01341 8.5e-154 spo0J K Belongs to the ParB family
LNECOIGD_01342 3.7e-44 yyzM S Bacterial protein of unknown function (DUF951)
LNECOIGD_01343 6.1e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LNECOIGD_01344 2e-138 XK27_01040 S Protein of unknown function (DUF1129)
LNECOIGD_01345 1.6e-297 V ABC transporter, ATP-binding protein
LNECOIGD_01346 0.0 V ABC transporter
LNECOIGD_01347 5.1e-122 K response regulator
LNECOIGD_01348 9.2e-209 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
LNECOIGD_01349 3.2e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LNECOIGD_01350 7.2e-146 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
LNECOIGD_01351 7.6e-255 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
LNECOIGD_01352 4.5e-29 tnpR L Resolvase, N terminal domain
LNECOIGD_01353 1.3e-33 ymdB S Macro domain protein
LNECOIGD_01355 1.6e-152 malG P ABC transporter permease
LNECOIGD_01356 2e-250 malF P Binding-protein-dependent transport system inner membrane component
LNECOIGD_01357 1.6e-211 malE G Bacterial extracellular solute-binding protein
LNECOIGD_01358 8.3e-207 msmX P Belongs to the ABC transporter superfamily
LNECOIGD_01359 6.3e-117 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
LNECOIGD_01360 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
LNECOIGD_01361 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
LNECOIGD_01362 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
LNECOIGD_01363 9.3e-45 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LNECOIGD_01364 3.2e-10 dedA 3.1.3.1 S SNARE associated Golgi protein
LNECOIGD_01365 1.1e-75 dedA 3.1.3.1 S SNARE associated Golgi protein
LNECOIGD_01366 2.9e-21 yfnA E Amino Acid
LNECOIGD_01367 2.6e-211 yfnA E Amino Acid
LNECOIGD_01368 3.3e-43 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNECOIGD_01369 1.4e-79 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNECOIGD_01371 2.3e-10 yxeH S hydrolase
LNECOIGD_01372 3.1e-27 yxeH S hydrolase
LNECOIGD_01373 3.4e-86 yxeH S hydrolase
LNECOIGD_01374 1.9e-74 S reductase
LNECOIGD_01375 1.2e-35 S reductase
LNECOIGD_01376 2.7e-219 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LNECOIGD_01377 1.7e-221 patA 2.6.1.1 E Aminotransferase
LNECOIGD_01378 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
LNECOIGD_01379 3.4e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
LNECOIGD_01380 1.1e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LNECOIGD_01381 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LNECOIGD_01382 8.5e-60
LNECOIGD_01383 4.2e-175 prmA J Ribosomal protein L11 methyltransferase
LNECOIGD_01384 4.4e-86 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LNECOIGD_01385 0.0 G Belongs to the glycosyl hydrolase 31 family
LNECOIGD_01386 5.7e-80 ntd 2.4.2.6 F Nucleoside
LNECOIGD_01387 5.6e-86 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LNECOIGD_01388 1.4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
LNECOIGD_01389 5.5e-86 uspA T universal stress protein
LNECOIGD_01391 6e-150 phnD P Phosphonate ABC transporter
LNECOIGD_01392 5.7e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LNECOIGD_01393 1.6e-127 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LNECOIGD_01394 4.6e-146 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LNECOIGD_01395 7.8e-108 tag 3.2.2.20 L glycosylase
LNECOIGD_01396 1.1e-81
LNECOIGD_01397 1.3e-273 S Calcineurin-like phosphoesterase
LNECOIGD_01398 0.0 asnB 6.3.5.4 E Asparagine synthase
LNECOIGD_01399 2.8e-254 yxbA 6.3.1.12 S ATP-grasp enzyme
LNECOIGD_01402 1e-62 S Uncharacterised protein family (UPF0236)
LNECOIGD_01403 4e-113
LNECOIGD_01404 1.9e-07 ohr O redox protein regulator of disulfide bond formation
LNECOIGD_01405 1.8e-170 hprA 1.1.1.29 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNECOIGD_01406 1.2e-46
LNECOIGD_01407 1.4e-53
LNECOIGD_01408 6.2e-66 ptsG 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
LNECOIGD_01409 4e-218 naiP EGP Major facilitator Superfamily
LNECOIGD_01410 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
LNECOIGD_01411 6.1e-291 oppA E ABC transporter
LNECOIGD_01412 1.7e-213 Q Imidazolonepropionase and related amidohydrolases
LNECOIGD_01413 1.9e-60 psiE S Phosphate-starvation-inducible E
LNECOIGD_01415 1.5e-222 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LNECOIGD_01416 1.3e-287 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
LNECOIGD_01417 2.2e-195 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
LNECOIGD_01418 2e-148 pbpX2 V Beta-lactamase
LNECOIGD_01419 2.5e-39 3.2.2.20 K acetyltransferase
LNECOIGD_01420 1.1e-92
LNECOIGD_01421 1.9e-46
LNECOIGD_01422 6.9e-41
LNECOIGD_01423 1.7e-267 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
LNECOIGD_01424 1.8e-131 glvR K Helix-turn-helix domain, rpiR family
LNECOIGD_01425 1.1e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
LNECOIGD_01426 3.2e-15
LNECOIGD_01427 6.7e-19
LNECOIGD_01428 2.5e-25 3.6.3.8 P P-type ATPase
LNECOIGD_01429 1.2e-43 3.6.3.8 P P-type ATPase
LNECOIGD_01430 2.3e-119 3.6.3.8 P P-type ATPase
LNECOIGD_01431 2.1e-101
LNECOIGD_01432 2.7e-238 S response to antibiotic
LNECOIGD_01433 2e-132 cysA V ABC transporter, ATP-binding protein
LNECOIGD_01434 0.0 V FtsX-like permease family
LNECOIGD_01435 3.4e-50 asdA 4.1.1.12 E Aminotransferase class I and II
LNECOIGD_01436 1.6e-176 lacX 5.1.3.3 G Aldose 1-epimerase
LNECOIGD_01437 1.9e-232 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LNECOIGD_01438 3e-90 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LNECOIGD_01439 4.3e-169 xerC D Phage integrase, N-terminal SAM-like domain
LNECOIGD_01440 2.6e-247 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LNECOIGD_01441 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LNECOIGD_01442 1.1e-155 dprA LU DNA protecting protein DprA
LNECOIGD_01443 3.7e-134 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LNECOIGD_01444 1.2e-157 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LNECOIGD_01445 6.8e-279 yjcE P Sodium proton antiporter
LNECOIGD_01446 9.3e-36 yozE S Belongs to the UPF0346 family
LNECOIGD_01447 2.9e-148 DegV S Uncharacterised protein, DegV family COG1307
LNECOIGD_01448 6.7e-114 hlyIII S protein, hemolysin III
LNECOIGD_01449 7e-13 ytgB S Transglycosylase associated protein
LNECOIGD_01450 1.7e-132 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
LNECOIGD_01451 1.2e-25 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
LNECOIGD_01452 3.8e-78 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
LNECOIGD_01453 1.1e-78 marR K Transcriptional regulator
LNECOIGD_01454 2.9e-179 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LNECOIGD_01455 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LNECOIGD_01456 3.7e-168 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
LNECOIGD_01457 1.2e-126 IQ reductase
LNECOIGD_01458 1.3e-229 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LNECOIGD_01459 3.7e-79 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LNECOIGD_01460 1.7e-72 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
LNECOIGD_01461 1.5e-258 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
LNECOIGD_01462 6e-157 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LNECOIGD_01463 4.1e-144 accA 2.1.3.15, 6.4.1.2 I alpha subunit
LNECOIGD_01464 1.9e-133 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
LNECOIGD_01465 5.3e-189 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LNECOIGD_01466 1.1e-87 bioY S BioY family
LNECOIGD_01467 9e-136 recO L Involved in DNA repair and RecF pathway recombination
LNECOIGD_01468 3.6e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LNECOIGD_01469 3.2e-92 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LNECOIGD_01470 3e-173 phoH T phosphate starvation-inducible protein PhoH
LNECOIGD_01471 1.6e-68 yqeY S YqeY-like protein
LNECOIGD_01472 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
LNECOIGD_01473 6.8e-153 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
LNECOIGD_01474 9.7e-66 S Peptidase family M23
LNECOIGD_01475 3.5e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LNECOIGD_01476 1.5e-107
LNECOIGD_01477 8.6e-110 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LNECOIGD_01478 1.7e-124 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
LNECOIGD_01479 2.7e-245 thrC 4.2.3.1 E Threonine synthase
LNECOIGD_01480 4.4e-186 lysC 2.7.2.4 E Belongs to the aspartokinase family
LNECOIGD_01481 3.9e-200 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LNECOIGD_01482 1.2e-181 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LNECOIGD_01483 6.1e-144 epsB M biosynthesis protein
LNECOIGD_01484 5e-121 ywqD 2.7.10.1 D Capsular exopolysaccharide family
LNECOIGD_01485 4.1e-144 ywqE 3.1.3.48 GM PHP domain protein
LNECOIGD_01486 1.8e-121 rfbP M Bacterial sugar transferase
LNECOIGD_01487 2.3e-108 M Glycosyl transferase 4-like domain
LNECOIGD_01488 2.4e-45 M Glycosyl transferases group 1
LNECOIGD_01489 2.3e-68 rfbF GT2 S Glycosyl transferase family 2
LNECOIGD_01490 3e-63 M Glycosyltransferase, group 1 family protein
LNECOIGD_01491 3.7e-25
LNECOIGD_01492 1.9e-38 S Glycosyl transferase family 2
LNECOIGD_01493 1.9e-18 S PFAM Glycosyl transferase family 2
LNECOIGD_01494 1.1e-170 whiA K May be required for sporulation
LNECOIGD_01495 4.4e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
LNECOIGD_01496 1.8e-164 rapZ S Displays ATPase and GTPase activities
LNECOIGD_01497 1.3e-80 S Short repeat of unknown function (DUF308)
LNECOIGD_01498 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LNECOIGD_01499 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LNECOIGD_01500 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
LNECOIGD_01501 8.9e-55 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LNECOIGD_01502 3e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
LNECOIGD_01503 2e-157 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LNECOIGD_01504 3.7e-179 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LNECOIGD_01505 8.4e-23
LNECOIGD_01506 9.5e-186 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LNECOIGD_01507 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LNECOIGD_01508 9.4e-95 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LNECOIGD_01509 5.9e-134 comFC S Competence protein
LNECOIGD_01510 2.3e-245 comFA L Helicase C-terminal domain protein
LNECOIGD_01511 6.2e-117 yvyE 3.4.13.9 S YigZ family
LNECOIGD_01512 2.4e-209 tagO 2.7.8.33, 2.7.8.35 M transferase
LNECOIGD_01513 3.1e-218 rny S Endoribonuclease that initiates mRNA decay
LNECOIGD_01514 3.6e-194 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LNECOIGD_01515 1.9e-98 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LNECOIGD_01516 9.5e-126 ymfM S Helix-turn-helix domain
LNECOIGD_01517 5.2e-133 IQ Enoyl-(Acyl carrier protein) reductase
LNECOIGD_01518 4.8e-235 S Peptidase M16
LNECOIGD_01519 4.3e-225 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
LNECOIGD_01520 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
LNECOIGD_01521 1.4e-68 WQ51_03320 S Protein of unknown function (DUF1149)
LNECOIGD_01522 1.6e-105 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LNECOIGD_01523 1.9e-212 yubA S AI-2E family transporter
LNECOIGD_01524 2.4e-65 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
LNECOIGD_01525 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
LNECOIGD_01526 5.7e-202 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
LNECOIGD_01527 3.7e-37 S SNARE associated Golgi protein
LNECOIGD_01528 1.3e-29 S SNARE associated Golgi protein
LNECOIGD_01529 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
LNECOIGD_01530 4.7e-30 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LNECOIGD_01531 3.8e-123 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LNECOIGD_01532 2.7e-154 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LNECOIGD_01533 2.3e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
LNECOIGD_01534 1.1e-112 yjbK S CYTH
LNECOIGD_01535 2.8e-111 yjbH Q Thioredoxin
LNECOIGD_01536 1.5e-158 coiA 3.6.4.12 S Competence protein
LNECOIGD_01537 2.6e-132 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LNECOIGD_01538 7.9e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LNECOIGD_01539 1.2e-305 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LNECOIGD_01540 8.5e-41 ptsH G phosphocarrier protein HPR
LNECOIGD_01541 2.4e-26
LNECOIGD_01542 0.0 clpE O Belongs to the ClpA ClpB family
LNECOIGD_01543 3.9e-44 XK27_09445 S Domain of unknown function (DUF1827)
LNECOIGD_01544 3.2e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LNECOIGD_01545 1.3e-159 hlyX S Transporter associated domain
LNECOIGD_01546 1.3e-73
LNECOIGD_01547 1.9e-86
LNECOIGD_01548 9.6e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
LNECOIGD_01549 3.3e-261 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LNECOIGD_01550 2.8e-98 D Alpha beta
LNECOIGD_01554 5.5e-81 K response regulator
LNECOIGD_01555 1.3e-50 sptS 2.7.13.3 T Histidine kinase
LNECOIGD_01556 6.1e-116 sptS 2.7.13.3 T Histidine kinase
LNECOIGD_01557 2.1e-208 EGP Major facilitator Superfamily
LNECOIGD_01558 9.2e-71 O OsmC-like protein
LNECOIGD_01559 5.1e-125 dkgA 1.1.1.346 S L-ascorbic acid biosynthetic process
LNECOIGD_01560 8.7e-91
LNECOIGD_01561 7.1e-88
LNECOIGD_01562 1.7e-60
LNECOIGD_01563 3.9e-39
LNECOIGD_01564 5.8e-272 yjeM E Amino Acid
LNECOIGD_01565 1.8e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LNECOIGD_01566 9.4e-195 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
LNECOIGD_01569 2.9e-90
LNECOIGD_01570 5.3e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LNECOIGD_01571 3.7e-33 S Haloacid dehalogenase-like hydrolase
LNECOIGD_01572 4.4e-49 S Haloacid dehalogenase-like hydrolase
LNECOIGD_01573 3.7e-284 pipD E Dipeptidase
LNECOIGD_01574 5.3e-158 msmR K AraC-like ligand binding domain
LNECOIGD_01575 4.9e-219 pbuX F xanthine permease
LNECOIGD_01576 7.4e-98 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LNECOIGD_01577 1.9e-112 K DNA-binding helix-turn-helix protein
LNECOIGD_01578 4.7e-21 K Helix-turn-helix
LNECOIGD_01579 4.9e-17 K Helix-turn-helix
LNECOIGD_01580 6.6e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LNECOIGD_01581 2.5e-91
LNECOIGD_01582 1.9e-276 V ABC transporter transmembrane region
LNECOIGD_01583 9.3e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
LNECOIGD_01584 5.1e-187 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LNECOIGD_01585 3e-95 F Nucleoside 2-deoxyribosyltransferase
LNECOIGD_01586 2.7e-69 S Peptidase propeptide and YPEB domain
LNECOIGD_01587 5.8e-86 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
LNECOIGD_01588 1.4e-67 yybA 2.3.1.57 K Transcriptional regulator
LNECOIGD_01589 7.8e-14 S Peptidase propeptide and YPEB domain
LNECOIGD_01590 1.4e-66 S Peptidase propeptide and YPEB domain
LNECOIGD_01591 3.1e-245 G Bacterial extracellular solute-binding protein
LNECOIGD_01592 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LNECOIGD_01593 3.9e-170 coaA 2.7.1.33 F Pantothenic acid kinase
LNECOIGD_01594 1.1e-103 E GDSL-like Lipase/Acylhydrolase
LNECOIGD_01595 1.2e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LNECOIGD_01596 1.7e-187 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
LNECOIGD_01597 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
LNECOIGD_01598 1.2e-188 lacR K Transcriptional regulator
LNECOIGD_01599 2.1e-24 lacS G Transporter
LNECOIGD_01600 1.4e-48 lacS G Transporter
LNECOIGD_01601 1.5e-142 lacS G Transporter
LNECOIGD_01602 0.0 lacS G Transporter
LNECOIGD_01603 3.2e-86 lacZ 3.2.1.23 G -beta-galactosidase
LNECOIGD_01604 2e-44 lacZ 3.2.1.23 G -beta-galactosidase
LNECOIGD_01605 1.5e-182 L Lactococcus lactis RepB C-terminus
LNECOIGD_01607 4.1e-119 3.1.21.3 V Type I restriction modification DNA specificity domain
LNECOIGD_01608 1.7e-38 S Antitoxin component of a toxin-antitoxin (TA) module
LNECOIGD_01609 7e-104 L Integrase
LNECOIGD_01612 4.7e-58 mobC S Bacterial mobilisation protein (MobC)
LNECOIGD_01613 2.1e-71 D Relaxase/Mobilisation nuclease domain
LNECOIGD_01614 2.6e-100 D Relaxase/Mobilisation nuclease domain
LNECOIGD_01615 3.4e-109
LNECOIGD_01616 3.4e-62 XK27_09990 D Fic/DOC family
LNECOIGD_01618 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNECOIGD_01619 1.2e-73 nrdI F Probably involved in ribonucleotide reductase function
LNECOIGD_01620 4.7e-193 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNECOIGD_01621 5.4e-42 IQ reductase
LNECOIGD_01622 9.6e-95 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
LNECOIGD_01623 5.9e-219 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
LNECOIGD_01624 1.1e-169 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
LNECOIGD_01626 5.6e-10
LNECOIGD_01627 4.7e-31 M Protein of unknown function (DUF3737)
LNECOIGD_01628 2.4e-225 patB 4.4.1.8 E Aminotransferase, class I
LNECOIGD_01629 8.6e-168 manA 5.3.1.8 G mannose-6-phosphate isomerase
LNECOIGD_01630 2.4e-60 S SdpI/YhfL protein family
LNECOIGD_01631 1.6e-129 K Transcriptional regulatory protein, C terminal
LNECOIGD_01632 4.1e-270 yclK 2.7.13.3 T Histidine kinase
LNECOIGD_01633 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LNECOIGD_01634 8.3e-108 vanZ V VanZ like family
LNECOIGD_01635 3e-259 pgi 5.3.1.9 G Belongs to the GPI family
LNECOIGD_01636 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LNECOIGD_01637 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LNECOIGD_01638 2.3e-29 secG U Preprotein translocase
LNECOIGD_01639 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LNECOIGD_01640 3.3e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LNECOIGD_01641 4.2e-200 cpoA GT4 M Glycosyltransferase, group 1 family protein
LNECOIGD_01642 8.1e-221 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
LNECOIGD_01649 6.9e-150 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
LNECOIGD_01650 1.8e-116 dedA S SNARE-like domain protein
LNECOIGD_01651 2.2e-84 S Protein of unknown function (DUF1461)
LNECOIGD_01652 1.2e-146 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LNECOIGD_01653 1.7e-87 yutD S Protein of unknown function (DUF1027)
LNECOIGD_01654 3.6e-276 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
LNECOIGD_01655 1.1e-55
LNECOIGD_01656 1.1e-254 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LNECOIGD_01657 1.1e-178 ccpA K catabolite control protein A
LNECOIGD_01658 2.2e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LNECOIGD_01659 1e-181 S Putative peptidoglycan binding domain
LNECOIGD_01660 1.8e-24
LNECOIGD_01661 1.9e-243 dtpT U amino acid peptide transporter
LNECOIGD_01662 0.0 pepN 3.4.11.2 E aminopeptidase
LNECOIGD_01664 1.2e-58 lysM M LysM domain
LNECOIGD_01665 1.7e-166
LNECOIGD_01666 6.3e-214 mdtG EGP Major facilitator Superfamily
LNECOIGD_01667 3.5e-36 S Transglycosylase associated protein
LNECOIGD_01668 1.8e-23 M Glycosyl hydrolases family 25
LNECOIGD_01669 1.1e-91 M Glycosyl hydrolases family 25
LNECOIGD_01670 8.2e-28 M Glycosyl hydrolases family 25
LNECOIGD_01671 1.3e-52
LNECOIGD_01672 4.4e-109 XK27_00160 S Domain of unknown function (DUF5052)
LNECOIGD_01673 5.9e-88 adk 2.7.4.3 F topology modulation protein
LNECOIGD_01674 5.3e-67
LNECOIGD_01675 7.6e-205 xerS L Belongs to the 'phage' integrase family
LNECOIGD_01676 1.8e-159 degV S EDD domain protein, DegV family
LNECOIGD_01677 7.7e-65
LNECOIGD_01678 0.0 FbpA K Fibronectin-binding protein
LNECOIGD_01679 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
LNECOIGD_01680 2.3e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LNECOIGD_01681 5e-157 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LNECOIGD_01682 9.5e-80 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LNECOIGD_01683 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
LNECOIGD_01684 3.7e-202 cpdA S Calcineurin-like phosphoesterase
LNECOIGD_01685 2.9e-215 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
LNECOIGD_01686 8e-70 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LNECOIGD_01687 8.6e-107 ypsA S Belongs to the UPF0398 family
LNECOIGD_01688 3.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LNECOIGD_01689 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
LNECOIGD_01690 5.1e-113 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LNECOIGD_01691 7.4e-115 dnaD L DnaD domain protein
LNECOIGD_01692 1.2e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
LNECOIGD_01693 1.1e-89 ypmB S Protein conserved in bacteria
LNECOIGD_01694 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
LNECOIGD_01695 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
LNECOIGD_01696 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
LNECOIGD_01697 4e-167 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
LNECOIGD_01698 2.2e-179 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
LNECOIGD_01699 4.2e-203 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
LNECOIGD_01700 1.6e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LNECOIGD_01701 2.8e-260 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
LNECOIGD_01702 1.8e-176
LNECOIGD_01703 2.7e-140
LNECOIGD_01704 3e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LNECOIGD_01705 7.8e-28
LNECOIGD_01706 3.4e-115 rarA L recombination factor protein RarA
LNECOIGD_01707 4.9e-10 rarA L recombination factor protein RarA
LNECOIGD_01708 1.6e-129
LNECOIGD_01709 1.1e-147
LNECOIGD_01710 1.1e-145
LNECOIGD_01711 2.8e-123 skfE V ATPases associated with a variety of cellular activities
LNECOIGD_01712 3.9e-60 yvoA_1 K Transcriptional regulator, GntR family
LNECOIGD_01713 1.4e-242 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LNECOIGD_01714 1e-153 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LNECOIGD_01715 2.4e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
LNECOIGD_01716 3.6e-68 mutT 3.6.1.55 F NUDIX domain
LNECOIGD_01717 6.8e-124 S Peptidase family M23
LNECOIGD_01718 4.6e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LNECOIGD_01719 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LNECOIGD_01720 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
LNECOIGD_01721 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
LNECOIGD_01722 0.0 XK27_08315 M Sulfatase
LNECOIGD_01723 1.3e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LNECOIGD_01724 3.6e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LNECOIGD_01725 5.3e-101 G Aldose 1-epimerase
LNECOIGD_01726 7.4e-109 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LNECOIGD_01727 1.9e-132 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LNECOIGD_01728 1.1e-133
LNECOIGD_01729 1.4e-51
LNECOIGD_01730 0.0 mgtA 3.6.3.2, 3.6.3.6 P COG0474 Cation transport ATPase
LNECOIGD_01731 2.1e-114 L transposase, IS605 OrfB family
LNECOIGD_01732 6.2e-105 L transposase, IS605 OrfB family
LNECOIGD_01733 1.6e-182 S AAA domain
LNECOIGD_01734 8.3e-125 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LNECOIGD_01735 5.5e-23
LNECOIGD_01736 6e-163 czcD P cation diffusion facilitator family transporter
LNECOIGD_01737 2e-126 pgm3 G Belongs to the phosphoglycerate mutase family
LNECOIGD_01738 1.6e-34 M Protein of unknown function (DUF3737)
LNECOIGD_01740 6.8e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LNECOIGD_01741 3.9e-187 ytxK 2.1.1.72 L N-6 DNA Methylase
LNECOIGD_01742 8.4e-82 comGF U Putative Competence protein ComGF
LNECOIGD_01743 1e-41
LNECOIGD_01744 2.1e-73
LNECOIGD_01745 3.7e-44 comGC U competence protein ComGC
LNECOIGD_01746 7.6e-175 comGB NU type II secretion system
LNECOIGD_01747 2.7e-177 comGA NU Type II IV secretion system protein
LNECOIGD_01748 8.9e-133 yebC K Transcriptional regulatory protein
LNECOIGD_01749 4.6e-91 S VanZ like family
LNECOIGD_01750 3.1e-110 K WHG domain
LNECOIGD_01751 8e-38
LNECOIGD_01752 1.8e-275 pipD E Dipeptidase
LNECOIGD_01753 1.2e-118 devA 3.6.3.25 V ABC transporter, ATP-binding protein
LNECOIGD_01754 2.6e-165 hrtB V ABC transporter permease
LNECOIGD_01755 2.2e-93 ygfC K Bacterial regulatory proteins, tetR family
LNECOIGD_01756 1.2e-111 G phosphoglycerate mutase
LNECOIGD_01757 6.6e-139 aroD S Alpha/beta hydrolase family
LNECOIGD_01758 6.4e-142 S Belongs to the UPF0246 family
LNECOIGD_01759 1.2e-120
LNECOIGD_01760 3.1e-49 2.7.7.12 C Domain of unknown function (DUF4931)
LNECOIGD_01761 1.1e-167 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
LNECOIGD_01762 1.8e-136 fruR K DeoR C terminal sensor domain
LNECOIGD_01765 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
LNECOIGD_01766 5.6e-26
LNECOIGD_01767 2.1e-32
LNECOIGD_01768 6.6e-34 yozG K Transcriptional regulator
LNECOIGD_01769 3.2e-37 S Enterocin A Immunity
LNECOIGD_01770 2e-14 S Enterocin A Immunity
LNECOIGD_01771 1.4e-211 S Archaea bacterial proteins of unknown function
LNECOIGD_01772 3e-99 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
LNECOIGD_01773 7.1e-239 aspT P Predicted Permease Membrane Region
LNECOIGD_01774 9.1e-153 asdA 4.1.1.12 E Aminotransferase
LNECOIGD_01775 1.5e-91 L Transposase and inactivated derivatives, IS30 family
LNECOIGD_01776 2.6e-45 IQ Enoyl-(Acyl carrier protein) reductase
LNECOIGD_01777 1.3e-16
LNECOIGD_01778 1.3e-11 S Transglycosylase associated protein
LNECOIGD_01779 1.5e-84 S Asp23 family, cell envelope-related function
LNECOIGD_01780 8.1e-22 S Small integral membrane protein (DUF2273)
LNECOIGD_01781 1.8e-93
LNECOIGD_01782 8.4e-21
LNECOIGD_01783 4.8e-186 S SLAP domain
LNECOIGD_01784 3e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LNECOIGD_01785 6.5e-149 GK ROK family
LNECOIGD_01786 5.5e-43
LNECOIGD_01787 1.4e-267 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
LNECOIGD_01788 3.6e-67 S Domain of unknown function (DUF1934)
LNECOIGD_01789 1.5e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LNECOIGD_01790 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LNECOIGD_01791 1.6e-45
LNECOIGD_01792 5.7e-155 mutR K Helix-turn-helix XRE-family like proteins
LNECOIGD_01793 2.9e-71 S Putative adhesin
LNECOIGD_01794 4.4e-262 V ABC transporter transmembrane region
LNECOIGD_01795 3.6e-47 S YoeB-like toxin of bacterial type II toxin-antitoxin system
LNECOIGD_01796 1.5e-49 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
LNECOIGD_01797 2.9e-202 napA P Sodium/hydrogen exchanger family
LNECOIGD_01798 0.0 cadA P P-type ATPase
LNECOIGD_01799 2.1e-42 S Enterocin A Immunity
LNECOIGD_01800 2.9e-48 lctP C L-lactate permease
LNECOIGD_01801 2.1e-90 lctP C L-lactate permease
LNECOIGD_01802 5.3e-35 lctP C L-lactate permease
LNECOIGD_01803 1.6e-101 potB E Binding-protein-dependent transport system inner membrane component
LNECOIGD_01804 2.3e-105 potC3 E Binding-protein-dependent transport system inner membrane component
LNECOIGD_01805 5.7e-133 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LNECOIGD_01806 2.6e-141 potD2 P ABC transporter
LNECOIGD_01807 3e-248 ade 3.5.4.2 F Adenine deaminase C-terminal domain
LNECOIGD_01808 8.6e-290 V ABC-type multidrug transport system, ATPase and permease components
LNECOIGD_01809 3.2e-284 V ABC-type multidrug transport system, ATPase and permease components
LNECOIGD_01811 4.4e-16 L PFAM IS66 Orf2 family protein
LNECOIGD_01812 3.3e-09
LNECOIGD_01813 9.6e-14 S Phage derived protein Gp49-like (DUF891)
LNECOIGD_01814 1.5e-40 K Helix-turn-helix XRE-family like proteins
LNECOIGD_01815 7.6e-42
LNECOIGD_01816 2.2e-53 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LNECOIGD_01817 1.5e-242 L Probable transposase
LNECOIGD_01818 2.5e-14 S Fic/DOC family
LNECOIGD_01819 1.4e-28 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LNECOIGD_01820 2.9e-198 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LNECOIGD_01821 3.1e-124 cas4 3.1.12.1 L Domain of unknown function DUF83
LNECOIGD_01822 9.3e-158 csd2 L CRISPR-associated protein Cas7
LNECOIGD_01823 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
LNECOIGD_01824 1.1e-143 cas5d S CRISPR-associated protein (Cas_Cas5)
LNECOIGD_01825 0.0 cas3 L Type III restriction enzyme, res subunit
LNECOIGD_01826 1.9e-236 purD 6.3.4.13 F Belongs to the GARS family
LNECOIGD_01827 3.2e-289 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
LNECOIGD_01828 3.2e-104 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LNECOIGD_01829 1.2e-194 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
LNECOIGD_01830 1.5e-275 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LNECOIGD_01831 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LNECOIGD_01832 2.3e-119 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LNECOIGD_01833 1.9e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LNECOIGD_01834 3.9e-133 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
LNECOIGD_01835 3.8e-218 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LNECOIGD_01836 1.9e-78 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LNECOIGD_01837 1.2e-310 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
LNECOIGD_01838 7.5e-123 darA C Flavodoxin
LNECOIGD_01839 4.8e-141 qmcA O prohibitin homologues
LNECOIGD_01840 4.3e-52 L RelB antitoxin
LNECOIGD_01841 3.8e-20
LNECOIGD_01842 2.9e-195 S Bacteriocin helveticin-J
LNECOIGD_01843 1.3e-38 M Peptidase family M1 domain
LNECOIGD_01844 8.6e-131 M Peptidase family M1 domain
LNECOIGD_01845 7e-62 M Peptidase family M1 domain
LNECOIGD_01846 8.7e-176 S SLAP domain
LNECOIGD_01847 9.7e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
LNECOIGD_01848 1.1e-223 S SLAP domain
LNECOIGD_01849 5.6e-56 S SLAP domain
LNECOIGD_01850 3.3e-123 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LNECOIGD_01851 7.3e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LNECOIGD_01852 1e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LNECOIGD_01853 1.7e-213 ecsB U ABC transporter
LNECOIGD_01854 3.9e-136 ecsA V ABC transporter, ATP-binding protein
LNECOIGD_01855 3.8e-54 higA K Helix-turn-helix XRE-family like proteins
LNECOIGD_01856 3.4e-79 hit FG Scavenger mRNA decapping enzyme C-term binding
LNECOIGD_01857 8e-28
LNECOIGD_01858 1.3e-154 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LNECOIGD_01859 1.6e-213 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LNECOIGD_01860 1.3e-48 S PAS domain
LNECOIGD_01861 4.5e-188 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
LNECOIGD_01862 0.0 L AAA domain
LNECOIGD_01863 7.7e-230 yhaO L Ser Thr phosphatase family protein
LNECOIGD_01864 3.6e-55 yheA S Belongs to the UPF0342 family
LNECOIGD_01865 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LNECOIGD_01866 2.8e-162 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LNECOIGD_01867 1.9e-09 5.3.3.2 C FMN-dependent dehydrogenase
LNECOIGD_01868 2.2e-134 mgtC S MgtC family
LNECOIGD_01869 2.9e-139 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LNECOIGD_01870 4.9e-54
LNECOIGD_01871 8.4e-148 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
LNECOIGD_01872 4.2e-20 UW LPXTG-motif cell wall anchor domain protein
LNECOIGD_01874 4e-153 yitS S EDD domain protein, DegV family
LNECOIGD_01875 3.3e-83 racA K Domain of unknown function (DUF1836)
LNECOIGD_01876 6.5e-178 I Carboxylesterase family
LNECOIGD_01877 1.1e-64 arsC 1.20.4.1 P Belongs to the ArsC family
LNECOIGD_01878 4e-27
LNECOIGD_01879 6.9e-62 S Bacterial PH domain
LNECOIGD_01880 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LNECOIGD_01881 2.5e-120 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
LNECOIGD_01882 4.4e-143 2.4.2.3 F Phosphorylase superfamily
LNECOIGD_01883 1.8e-144 2.4.2.3 F Phosphorylase superfamily
LNECOIGD_01884 8e-146 cbiQ P cobalt transport
LNECOIGD_01885 0.0 ykoD P ABC transporter, ATP-binding protein
LNECOIGD_01886 1.4e-93 S UPF0397 protein
LNECOIGD_01887 2.2e-66 S Domain of unknown function DUF1828
LNECOIGD_01888 4.7e-16
LNECOIGD_01889 2.7e-51
LNECOIGD_01890 2e-172 citR K Putative sugar-binding domain
LNECOIGD_01891 3.1e-248 yjjP S Putative threonine/serine exporter
LNECOIGD_01892 2.7e-96 yxkA S Phosphatidylethanolamine-binding protein
LNECOIGD_01894 1.5e-19 pfoS S Phosphotransferase system, EIIC
LNECOIGD_01895 1.3e-114 pfoS S Phosphotransferase system, EIIC
LNECOIGD_01896 1.4e-257 slpX S SLAP domain
LNECOIGD_01897 1.5e-92
LNECOIGD_01900 8.6e-212
LNECOIGD_01901 1.6e-123 gntR1 K UTRA
LNECOIGD_01902 1.8e-55 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
LNECOIGD_01903 3.4e-41 L transposase, IS605 OrfB family
LNECOIGD_01904 3.4e-252 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LNECOIGD_01905 2.3e-96 J Acetyltransferase (GNAT) domain
LNECOIGD_01906 2.8e-108 yjbF S SNARE associated Golgi protein
LNECOIGD_01907 1.3e-153 I alpha/beta hydrolase fold
LNECOIGD_01908 5.9e-126 hipB K Helix-turn-helix
LNECOIGD_01909 1.6e-260 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
LNECOIGD_01910 4.3e-149
LNECOIGD_01911 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LNECOIGD_01912 1.4e-242 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LNECOIGD_01913 0.0 oatA I Acyltransferase
LNECOIGD_01914 1.2e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LNECOIGD_01915 6.7e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LNECOIGD_01916 9.5e-28 yrvD S Lipopolysaccharide assembly protein A domain
LNECOIGD_01917 1.1e-94
LNECOIGD_01918 1.2e-74 nrdI F Belongs to the NrdI family
LNECOIGD_01919 9.9e-10 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNECOIGD_01920 7.8e-20
LNECOIGD_01921 1.6e-67
LNECOIGD_01922 1.1e-81 S Threonine/Serine exporter, ThrE
LNECOIGD_01923 4.4e-138 thrE S Putative threonine/serine exporter
LNECOIGD_01924 1.1e-289 S ABC transporter
LNECOIGD_01925 5e-55
LNECOIGD_01926 4.9e-99 rimL J Acetyltransferase (GNAT) domain
LNECOIGD_01927 1.4e-115 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
LNECOIGD_01928 1.5e-166 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LNECOIGD_01929 9.2e-208 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LNECOIGD_01930 1.5e-222 KQ helix_turn_helix, mercury resistance
LNECOIGD_01931 2.3e-117 S KAP family P-loop domain
LNECOIGD_01932 9.7e-86
LNECOIGD_01933 3.9e-44 relB L Addiction module antitoxin, RelB DinJ family
LNECOIGD_01934 5.2e-50 repA S Replication initiator protein A
LNECOIGD_01935 3.2e-71 repA S Replication initiator protein A
LNECOIGD_01936 1.8e-75 sdrF M domain protein
LNECOIGD_01937 3.4e-98 infB M YSIRK type signal peptide
LNECOIGD_01938 4.5e-16 sdrF M domain protein
LNECOIGD_01939 8.4e-139 pnuC H nicotinamide mononucleotide transporter
LNECOIGD_01940 4.1e-11
LNECOIGD_01941 3.8e-15
LNECOIGD_01942 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LNECOIGD_01943 4.5e-118 srtA 3.4.22.70 M sortase family
LNECOIGD_01944 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
LNECOIGD_01945 1.8e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LNECOIGD_01946 5.2e-15 L transposase, IS605 OrfB family
LNECOIGD_01947 5.8e-99 L transposase, IS605 OrfB family
LNECOIGD_01948 2.7e-74 L transposase, IS605 OrfB family
LNECOIGD_01949 4.6e-216 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
LNECOIGD_01950 3.3e-217 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
LNECOIGD_01951 1.8e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
LNECOIGD_01952 4.2e-46
LNECOIGD_01953 1.1e-17 D Alpha beta
LNECOIGD_01954 2.7e-111
LNECOIGD_01955 0.0 2.1.1.72 V Type II restriction enzyme, methylase subunits
LNECOIGD_01958 4.8e-09
LNECOIGD_01959 2.2e-143 D ftsk spoiiie
LNECOIGD_01960 3.7e-162
LNECOIGD_01961 3.5e-230 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LNECOIGD_01962 3.3e-44 ybeC E amino acid
LNECOIGD_01963 2.7e-189 ybeC E amino acid
LNECOIGD_01964 7.3e-26 ybeC E amino acid
LNECOIGD_01965 1.3e-156 S Sucrose-6F-phosphate phosphohydrolase
LNECOIGD_01966 1.3e-38 rpmE2 J Ribosomal protein L31
LNECOIGD_01967 2.2e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LNECOIGD_01968 2.7e-245 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LNECOIGD_01969 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LNECOIGD_01970 3.4e-216 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LNECOIGD_01971 8.6e-92 K transcriptional regulator
LNECOIGD_01972 2.4e-127 S (CBS) domain
LNECOIGD_01973 7.3e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LNECOIGD_01974 4.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LNECOIGD_01975 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LNECOIGD_01976 1.8e-34 yabO J S4 domain protein
LNECOIGD_01977 5.8e-59 divIC D Septum formation initiator
LNECOIGD_01978 2.2e-60 yabR J S1 RNA binding domain
LNECOIGD_01979 1.2e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LNECOIGD_01980 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LNECOIGD_01981 5e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LNECOIGD_01982 1e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LNECOIGD_01983 4.9e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LNECOIGD_01985 5.7e-28
LNECOIGD_01986 1.6e-08
LNECOIGD_01988 2.9e-81 yebR 1.8.4.14 T GAF domain-containing protein
LNECOIGD_01989 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LNECOIGD_01990 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNECOIGD_01991 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNECOIGD_01992 9.9e-234 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LNECOIGD_01993 2.6e-130 znuB U ABC 3 transport family
LNECOIGD_01994 7.9e-117 fhuC P ABC transporter
LNECOIGD_01995 7.6e-158 psaA P Belongs to the bacterial solute-binding protein 9 family
LNECOIGD_01996 1e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
LNECOIGD_01997 3.4e-78
LNECOIGD_02000 2.7e-07 K Bacterial regulatory proteins, tetR family
LNECOIGD_02001 1.3e-81 1.6.5.2 S Flavodoxin-like fold
LNECOIGD_02002 1.6e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LNECOIGD_02003 8e-42 S RelB antitoxin
LNECOIGD_02004 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
LNECOIGD_02005 1.9e-275 E Amino acid permease
LNECOIGD_02006 1e-51
LNECOIGD_02007 8.6e-41 gcvR T Belongs to the UPF0237 family
LNECOIGD_02008 1.7e-246 XK27_08635 S UPF0210 protein
LNECOIGD_02009 3.8e-53 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
LNECOIGD_02010 1.1e-140 M NlpC/P60 family
LNECOIGD_02012 1.6e-115 S SLAP domain
LNECOIGD_02014 2.3e-07
LNECOIGD_02015 6.4e-58
LNECOIGD_02016 4.3e-16
LNECOIGD_02017 1.7e-14
LNECOIGD_02018 4.5e-186 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LNECOIGD_02019 3.1e-80 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LNECOIGD_02020 0.0 dnaK O Heat shock 70 kDa protein
LNECOIGD_02021 2.8e-197 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LNECOIGD_02022 1.3e-44
LNECOIGD_02023 2e-77 S Domain of unknown function (DUF5067)
LNECOIGD_02024 4.8e-63
LNECOIGD_02026 4.3e-120 XK27_07525 3.6.1.55 F NUDIX domain
LNECOIGD_02027 6.2e-145 2.4.2.3 F Phosphorylase superfamily
LNECOIGD_02028 1.2e-51 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
LNECOIGD_02030 6.8e-78 K Acetyltransferase (GNAT) domain
LNECOIGD_02031 3.4e-55
LNECOIGD_02032 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LNECOIGD_02033 5.7e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LNECOIGD_02034 9.5e-129 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
LNECOIGD_02035 2.1e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
LNECOIGD_02036 0.0 S Predicted membrane protein (DUF2207)
LNECOIGD_02037 1.4e-199 M Glycosyl hydrolases family 25
LNECOIGD_02039 1.5e-82 yoaK S Protein of unknown function (DUF1275)
LNECOIGD_02040 6.2e-55 K Helix-turn-helix domain
LNECOIGD_02041 5.9e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LNECOIGD_02042 3.3e-164 ppaC 3.6.1.1 C inorganic pyrophosphatase
LNECOIGD_02043 5.1e-170 K Transcriptional regulator
LNECOIGD_02044 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LNECOIGD_02045 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LNECOIGD_02046 3.2e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LNECOIGD_02047 0.0 snf 2.7.11.1 KL domain protein
LNECOIGD_02048 3.9e-43 snf 2.7.11.1 KL domain protein
LNECOIGD_02049 7.1e-18 snf 2.7.11.1 KL domain protein
LNECOIGD_02050 7.8e-32
LNECOIGD_02051 9.1e-18
LNECOIGD_02052 5.8e-85 dps P Belongs to the Dps family
LNECOIGD_02053 4.4e-94 K acetyltransferase
LNECOIGD_02054 5.2e-164 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
LNECOIGD_02055 4.8e-50 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LNECOIGD_02056 1.5e-39 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LNECOIGD_02057 1.2e-106 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LNECOIGD_02058 1.9e-83 K Bacterial regulatory proteins, tetR family
LNECOIGD_02059 5.4e-47 1.1.1.3 T phosphoserine phosphatase activity
LNECOIGD_02060 9.9e-143 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
LNECOIGD_02061 2.1e-39 S Hydrolases of the alpha beta superfamily
LNECOIGD_02062 1.4e-57 S Alpha beta hydrolase
LNECOIGD_02063 9e-52 K Acetyltransferase (GNAT) family
LNECOIGD_02064 2e-255 gor 1.8.1.7 C Glutathione reductase
LNECOIGD_02066 9.9e-117 L Integrase
LNECOIGD_02068 3e-19 dam 2.1.1.72 H Site-specific DNA-methyltransferase (adenine-specific)
LNECOIGD_02069 7.1e-99 L hmm pf00665
LNECOIGD_02070 9.5e-124 L Helix-turn-helix domain
LNECOIGD_02071 1.7e-159 cjaA ET ABC transporter substrate-binding protein
LNECOIGD_02072 5.3e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LNECOIGD_02073 3.1e-87 P ABC transporter permease
LNECOIGD_02074 6e-112 papP P ABC transporter, permease protein
LNECOIGD_02075 1e-69 adhR K helix_turn_helix, mercury resistance
LNECOIGD_02076 2.8e-27 S Uncharacterized protein conserved in bacteria (DUF2255)
LNECOIGD_02077 2.6e-109 G Antibiotic biosynthesis monooxygenase
LNECOIGD_02078 3e-94 lacA 2.3.1.79 S Maltose acetyltransferase
LNECOIGD_02079 1e-125 4.1.1.45 S Amidohydrolase
LNECOIGD_02081 8.5e-66 S Abi-like protein
LNECOIGD_02082 1.5e-84 kptA H Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
LNECOIGD_02083 7.7e-70 fabK 1.3.1.9 S Nitronate monooxygenase
LNECOIGD_02084 2.1e-32
LNECOIGD_02085 8.8e-229 yrvN L AAA C-terminal domain
LNECOIGD_02086 8.9e-140 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
LNECOIGD_02087 2.4e-51
LNECOIGD_02088 2e-22 K Helix-turn-helix XRE-family like proteins
LNECOIGD_02089 8e-125 magIII L Base excision DNA repair protein, HhH-GPD family
LNECOIGD_02090 3.9e-41
LNECOIGD_02091 6e-76 K LytTr DNA-binding domain
LNECOIGD_02092 4e-53 S Protein of unknown function (DUF3021)
LNECOIGD_02093 3.2e-89 XK27_09675 K Acetyltransferase (GNAT) domain
LNECOIGD_02094 2.6e-79 lgtD S glycosyl transferase family 2
LNECOIGD_02095 1.6e-202 glf 5.4.99.9 M UDP-galactopyranose mutase
LNECOIGD_02096 6.9e-24 L Transposase
LNECOIGD_02099 4.4e-53 M Psort location Cytoplasmic, score
LNECOIGD_02100 3.9e-29 2.4.1.308 GT11 S N-acetyllactosaminide 3-alpha-galactosyltransferase activity
LNECOIGD_02101 1.4e-216 G Major Facilitator Superfamily
LNECOIGD_02102 3e-06
LNECOIGD_02104 3.6e-59 S Archaea bacterial proteins of unknown function
LNECOIGD_02105 6.3e-31 S Archaea bacterial proteins of unknown function
LNECOIGD_02106 6.2e-94 M NlpC/P60 family
LNECOIGD_02107 1.8e-93 gmk2 2.7.4.8 F Guanylate kinase homologues.
LNECOIGD_02108 4.3e-25
LNECOIGD_02109 1.3e-279 S O-antigen ligase like membrane protein
LNECOIGD_02110 5.4e-215 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LNECOIGD_02111 0.0 pepF E oligoendopeptidase F
LNECOIGD_02112 1.1e-22 Z012_06740 S Fic/DOC family
LNECOIGD_02113 2.2e-70 L Transposase and inactivated derivatives, IS30 family
LNECOIGD_02114 2.1e-216 yceI EGP Major facilitator Superfamily
LNECOIGD_02115 1.1e-153 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, C-terminal domain
LNECOIGD_02116 2.3e-122 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
LNECOIGD_02117 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LNECOIGD_02118 2.3e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LNECOIGD_02119 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LNECOIGD_02120 6.4e-27 K Helix-turn-helix XRE-family like proteins
LNECOIGD_02121 1.4e-203 S Bacteriocin helveticin-J
LNECOIGD_02122 8e-244 slpX S SLAP domain
LNECOIGD_02123 2.7e-56 L Integrase
LNECOIGD_02124 1.1e-126 pgm3 G Phosphoglycerate mutase family
LNECOIGD_02125 1.7e-125 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
LNECOIGD_02126 0.0 helD 3.6.4.12 L DNA helicase
LNECOIGD_02127 5.9e-91 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LNECOIGD_02128 4.9e-140 S Membrane protein involved in the export of O-antigen and teichoic acid
LNECOIGD_02129 9.5e-66 M Glycosyltransferase like family 2
LNECOIGD_02130 1e-43
LNECOIGD_02131 1e-279 hsdR 3.1.21.3 L DEAD/DEAH box helicase
LNECOIGD_02132 6.1e-226 S response to antibiotic

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)