ORF_ID e_value Gene_name EC_number CAZy COGs Description
PLDGJAPA_00002 1.5e-191 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PLDGJAPA_00003 2.2e-102 3.6.1.27 I Acid phosphatase homologues
PLDGJAPA_00004 2.3e-148 yitS S Uncharacterised protein, DegV family COG1307
PLDGJAPA_00005 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PLDGJAPA_00006 4.1e-89 S Domain of unknown function (DUF4767)
PLDGJAPA_00007 2.5e-83 C nitroreductase
PLDGJAPA_00008 5.4e-137 ypbG 2.7.1.2 GK ROK family
PLDGJAPA_00009 4.4e-274 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PLDGJAPA_00010 3.7e-223 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLDGJAPA_00011 1.9e-119 gmuR K UTRA
PLDGJAPA_00012 1e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PLDGJAPA_00013 3.2e-71 S Domain of unknown function (DUF3284)
PLDGJAPA_00014 2.5e-250 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLDGJAPA_00015 8.3e-85
PLDGJAPA_00016 3.3e-59 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PLDGJAPA_00017 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PLDGJAPA_00018 1.4e-127 K UTRA domain
PLDGJAPA_00019 2.4e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PLDGJAPA_00020 4.9e-90 alkD L DNA alkylation repair enzyme
PLDGJAPA_00021 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PLDGJAPA_00022 2.3e-82
PLDGJAPA_00023 3.6e-39 C FMN_bind
PLDGJAPA_00024 6e-299 I Protein of unknown function (DUF2974)
PLDGJAPA_00025 5.6e-195 pbpX1 V Beta-lactamase
PLDGJAPA_00026 1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PLDGJAPA_00027 3.8e-218 aspC 2.6.1.1 E Aminotransferase
PLDGJAPA_00028 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PLDGJAPA_00029 2.8e-176 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PLDGJAPA_00030 5.2e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PLDGJAPA_00031 9.7e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PLDGJAPA_00032 3.3e-247 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PLDGJAPA_00033 1.9e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
PLDGJAPA_00034 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PLDGJAPA_00035 6.2e-127 yjeM E Amino Acid
PLDGJAPA_00036 1.3e-22 yjeM E Amino Acid
PLDGJAPA_00037 3.7e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
PLDGJAPA_00038 4.1e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PLDGJAPA_00039 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PLDGJAPA_00040 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PLDGJAPA_00041 9.2e-150
PLDGJAPA_00042 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PLDGJAPA_00043 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PLDGJAPA_00044 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
PLDGJAPA_00045 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
PLDGJAPA_00046 0.0 comEC S Competence protein ComEC
PLDGJAPA_00047 4.5e-78 comEA L Competence protein ComEA
PLDGJAPA_00048 6.2e-188 ylbL T Belongs to the peptidase S16 family
PLDGJAPA_00049 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PLDGJAPA_00050 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PLDGJAPA_00051 2.5e-53 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PLDGJAPA_00052 2.7e-211 ftsW D Belongs to the SEDS family
PLDGJAPA_00053 0.0 typA T GTP-binding protein TypA
PLDGJAPA_00054 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PLDGJAPA_00055 3.2e-33 ykzG S Belongs to the UPF0356 family
PLDGJAPA_00056 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PLDGJAPA_00057 3.6e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PLDGJAPA_00058 2.2e-296 L Nuclease-related domain
PLDGJAPA_00059 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PLDGJAPA_00060 8.3e-106 S Repeat protein
PLDGJAPA_00061 1.5e-126 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PLDGJAPA_00062 4.6e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PLDGJAPA_00063 2.2e-57 XK27_04120 S Putative amino acid metabolism
PLDGJAPA_00064 6.9e-204 iscS 2.8.1.7 E Aminotransferase class V
PLDGJAPA_00065 1.3e-112 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PLDGJAPA_00066 4.7e-30
PLDGJAPA_00067 3.3e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PLDGJAPA_00068 3e-30 cspA K 'Cold-shock' DNA-binding domain
PLDGJAPA_00069 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PLDGJAPA_00070 2.8e-74 gpsB D DivIVA domain protein
PLDGJAPA_00071 2e-149 ylmH S S4 domain protein
PLDGJAPA_00072 1.7e-45 yggT S YGGT family
PLDGJAPA_00073 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PLDGJAPA_00074 1.8e-219 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PLDGJAPA_00075 2.6e-247 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PLDGJAPA_00076 4.1e-153 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PLDGJAPA_00077 4.4e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PLDGJAPA_00078 7.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PLDGJAPA_00079 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PLDGJAPA_00080 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PLDGJAPA_00081 4.1e-54 ftsL D Cell division protein FtsL
PLDGJAPA_00082 1.9e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PLDGJAPA_00083 6.3e-78 mraZ K Belongs to the MraZ family
PLDGJAPA_00084 6.4e-54 S Protein of unknown function (DUF3397)
PLDGJAPA_00086 1.8e-93 mreD
PLDGJAPA_00087 2.4e-145 mreC M Involved in formation and maintenance of cell shape
PLDGJAPA_00088 3.1e-176 mreB D cell shape determining protein MreB
PLDGJAPA_00089 2.9e-103 radC L DNA repair protein
PLDGJAPA_00090 5.7e-126 S Haloacid dehalogenase-like hydrolase
PLDGJAPA_00091 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PLDGJAPA_00092 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PLDGJAPA_00093 2.7e-42 K Helix-turn-helix XRE-family like proteins
PLDGJAPA_00094 4.9e-63 S Phage derived protein Gp49-like (DUF891)
PLDGJAPA_00095 4.4e-16 1.3.5.4 C FAD binding domain
PLDGJAPA_00096 5.9e-32 K Helix-turn-helix domain
PLDGJAPA_00097 1.7e-48 K Helix-turn-helix domain
PLDGJAPA_00098 1.9e-26 K Helix-turn-helix domain
PLDGJAPA_00099 1.7e-165
PLDGJAPA_00100 0.0 3.6.3.8 P P-type ATPase
PLDGJAPA_00102 2.9e-44
PLDGJAPA_00103 7.5e-94 S Protein of unknown function (DUF3990)
PLDGJAPA_00104 6.2e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PLDGJAPA_00105 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
PLDGJAPA_00106 4.3e-150 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PLDGJAPA_00107 5.2e-122 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PLDGJAPA_00108 5.2e-187
PLDGJAPA_00109 3.4e-70
PLDGJAPA_00110 6.9e-40 K Helix-turn-helix XRE-family like proteins
PLDGJAPA_00111 5.7e-106 S Protein of unknown function (DUF3232)
PLDGJAPA_00112 6e-61 L Transposase
PLDGJAPA_00113 1.9e-255
PLDGJAPA_00114 1.2e-81
PLDGJAPA_00115 9.7e-152 K Helix-turn-helix XRE-family like proteins
PLDGJAPA_00116 6.3e-278 S SLAP domain
PLDGJAPA_00117 1.8e-136 K Helix-turn-helix XRE-family like proteins
PLDGJAPA_00118 4.1e-147
PLDGJAPA_00119 3.2e-127 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PLDGJAPA_00120 3.2e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PLDGJAPA_00121 5.1e-215 iscS2 2.8.1.7 E Aminotransferase class V
PLDGJAPA_00122 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PLDGJAPA_00123 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PLDGJAPA_00124 9.9e-85 yueI S Protein of unknown function (DUF1694)
PLDGJAPA_00125 7.4e-239 rarA L recombination factor protein RarA
PLDGJAPA_00126 8.4e-39
PLDGJAPA_00127 9.8e-77 usp6 T universal stress protein
PLDGJAPA_00128 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PLDGJAPA_00129 4.6e-112 L Transposase
PLDGJAPA_00130 1.2e-216 rodA D Belongs to the SEDS family
PLDGJAPA_00131 1.5e-33 S Protein of unknown function (DUF2969)
PLDGJAPA_00132 2e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PLDGJAPA_00133 2.5e-178 mbl D Cell shape determining protein MreB Mrl
PLDGJAPA_00134 6.9e-31 ywzB S Protein of unknown function (DUF1146)
PLDGJAPA_00135 7.6e-71 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PLDGJAPA_00136 4e-254 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PLDGJAPA_00137 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PLDGJAPA_00138 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PLDGJAPA_00139 2e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PLDGJAPA_00140 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PLDGJAPA_00141 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PLDGJAPA_00142 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PLDGJAPA_00143 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PLDGJAPA_00144 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PLDGJAPA_00145 8.1e-154 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PLDGJAPA_00146 1.2e-181 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PLDGJAPA_00147 1.3e-113 tdk 2.7.1.21 F thymidine kinase
PLDGJAPA_00148 5.8e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PLDGJAPA_00151 3.5e-196 ampC V Beta-lactamase
PLDGJAPA_00152 5.8e-218 EGP Major facilitator Superfamily
PLDGJAPA_00153 4.6e-260 pgi 5.3.1.9 G Belongs to the GPI family
PLDGJAPA_00154 8.5e-105 vanZ V VanZ like family
PLDGJAPA_00155 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PLDGJAPA_00156 6.1e-266 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
PLDGJAPA_00157 4.4e-129 K Transcriptional regulatory protein, C terminal
PLDGJAPA_00158 7.7e-67 S SdpI/YhfL protein family
PLDGJAPA_00159 2.5e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
PLDGJAPA_00160 1.2e-224 patB 4.4.1.8 E Aminotransferase, class I
PLDGJAPA_00161 2.4e-79 M Protein of unknown function (DUF3737)
PLDGJAPA_00162 2.2e-14 M Protein of unknown function (DUF3737)
PLDGJAPA_00164 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PLDGJAPA_00165 1e-187 ytxK 2.1.1.72 L N-6 DNA Methylase
PLDGJAPA_00166 1e-20
PLDGJAPA_00167 1.5e-76 comGF U Putative Competence protein ComGF
PLDGJAPA_00168 8.6e-41
PLDGJAPA_00169 7.4e-71
PLDGJAPA_00170 8.9e-43 comGC U competence protein ComGC
PLDGJAPA_00171 7.8e-172 comGB NU type II secretion system
PLDGJAPA_00172 1.1e-178 comGA NU Type II IV secretion system protein
PLDGJAPA_00173 8.9e-133 yebC K Transcriptional regulatory protein
PLDGJAPA_00174 6.4e-93 S VanZ like family
PLDGJAPA_00175 3.2e-110 ylbE GM NAD(P)H-binding
PLDGJAPA_00176 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PLDGJAPA_00178 9.7e-305 E Amino acid permease
PLDGJAPA_00179 1.3e-176 D Alpha beta
PLDGJAPA_00180 1.7e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PLDGJAPA_00181 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
PLDGJAPA_00182 1.7e-143 licT K CAT RNA binding domain
PLDGJAPA_00183 1.8e-209 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PLDGJAPA_00184 1.1e-83 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PLDGJAPA_00185 2.5e-119
PLDGJAPA_00186 5.1e-75 K Penicillinase repressor
PLDGJAPA_00187 6.4e-148 S hydrolase
PLDGJAPA_00188 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PLDGJAPA_00189 2e-172 ybbR S YbbR-like protein
PLDGJAPA_00190 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PLDGJAPA_00191 4.7e-207 potD P ABC transporter
PLDGJAPA_00192 4.8e-127 potC P ABC transporter permease
PLDGJAPA_00193 4.6e-130 potB P ABC transporter permease
PLDGJAPA_00194 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PLDGJAPA_00195 5.4e-164 murB 1.3.1.98 M Cell wall formation
PLDGJAPA_00196 1.2e-97 dnaQ 2.7.7.7 L DNA polymerase III
PLDGJAPA_00197 1.4e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PLDGJAPA_00198 1.6e-180 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PLDGJAPA_00199 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PLDGJAPA_00200 2e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PLDGJAPA_00201 1.2e-94
PLDGJAPA_00202 2.9e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PLDGJAPA_00203 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PLDGJAPA_00204 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PLDGJAPA_00205 7.4e-189 cggR K Putative sugar-binding domain
PLDGJAPA_00207 6.3e-290
PLDGJAPA_00208 6e-274 ycaM E amino acid
PLDGJAPA_00209 7.3e-141 S Cysteine-rich secretory protein family
PLDGJAPA_00210 1.4e-77 K MerR HTH family regulatory protein
PLDGJAPA_00211 1.8e-262 lmrB EGP Major facilitator Superfamily
PLDGJAPA_00212 8.7e-96 S Domain of unknown function (DUF4811)
PLDGJAPA_00213 5.6e-130 ybbM S Uncharacterised protein family (UPF0014)
PLDGJAPA_00214 4.9e-111 ybbL S ABC transporter, ATP-binding protein
PLDGJAPA_00215 0.0 S SH3-like domain
PLDGJAPA_00216 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PLDGJAPA_00217 2.1e-171 whiA K May be required for sporulation
PLDGJAPA_00218 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PLDGJAPA_00219 6.2e-165 rapZ S Displays ATPase and GTPase activities
PLDGJAPA_00220 1.1e-90 S Short repeat of unknown function (DUF308)
PLDGJAPA_00221 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PLDGJAPA_00222 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PLDGJAPA_00223 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PLDGJAPA_00224 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PLDGJAPA_00225 9.7e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PLDGJAPA_00226 5.4e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PLDGJAPA_00227 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PLDGJAPA_00228 5.1e-17
PLDGJAPA_00229 5.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PLDGJAPA_00230 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PLDGJAPA_00231 4.2e-95 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PLDGJAPA_00232 2.2e-133 comFC S Competence protein
PLDGJAPA_00233 7.5e-244 comFA L Helicase C-terminal domain protein
PLDGJAPA_00234 1.9e-118 yvyE 3.4.13.9 S YigZ family
PLDGJAPA_00235 1.7e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
PLDGJAPA_00236 3.4e-209 rny S Endoribonuclease that initiates mRNA decay
PLDGJAPA_00237 8.5e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PLDGJAPA_00238 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PLDGJAPA_00239 5.2e-97 ymfM S Helix-turn-helix domain
PLDGJAPA_00240 8.9e-133 IQ Enoyl-(Acyl carrier protein) reductase
PLDGJAPA_00241 3.9e-237 S Peptidase M16
PLDGJAPA_00242 2.6e-222 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PLDGJAPA_00243 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PLDGJAPA_00244 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
PLDGJAPA_00245 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PLDGJAPA_00246 4.9e-213 yubA S AI-2E family transporter
PLDGJAPA_00247 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PLDGJAPA_00248 1.1e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PLDGJAPA_00249 4.2e-92 S SNARE associated Golgi protein
PLDGJAPA_00250 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PLDGJAPA_00251 4.1e-172 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PLDGJAPA_00252 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PLDGJAPA_00253 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
PLDGJAPA_00254 6.1e-111 yjbK S CYTH
PLDGJAPA_00255 6e-114 yjbH Q Thioredoxin
PLDGJAPA_00256 5.8e-160 coiA 3.6.4.12 S Competence protein
PLDGJAPA_00257 7.2e-138 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PLDGJAPA_00258 6.1e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PLDGJAPA_00260 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PLDGJAPA_00261 8.5e-41 ptsH G phosphocarrier protein HPR
PLDGJAPA_00262 5.3e-26
PLDGJAPA_00263 0.0 clpE O Belongs to the ClpA ClpB family
PLDGJAPA_00264 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
PLDGJAPA_00265 3.5e-31
PLDGJAPA_00266 2.3e-51 L Transposase
PLDGJAPA_00267 3.4e-24
PLDGJAPA_00270 3.6e-14
PLDGJAPA_00273 1.6e-264 V ABC transporter transmembrane region
PLDGJAPA_00274 3.2e-147
PLDGJAPA_00275 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PLDGJAPA_00276 1.1e-140 hlyX S Transporter associated domain
PLDGJAPA_00277 1.6e-74
PLDGJAPA_00278 1.6e-85
PLDGJAPA_00279 4.3e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
PLDGJAPA_00280 4.1e-264 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PLDGJAPA_00281 7.4e-177 D Alpha beta
PLDGJAPA_00282 9.4e-46
PLDGJAPA_00283 2.4e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PLDGJAPA_00284 1e-213 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PLDGJAPA_00285 1.5e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PLDGJAPA_00286 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PLDGJAPA_00287 3.6e-163 yihY S Belongs to the UPF0761 family
PLDGJAPA_00288 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
PLDGJAPA_00289 4.1e-80 fld C Flavodoxin
PLDGJAPA_00290 3.1e-87 gtcA S Teichoic acid glycosylation protein
PLDGJAPA_00291 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PLDGJAPA_00293 2.6e-247 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLDGJAPA_00294 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
PLDGJAPA_00295 4.7e-131 M Glycosyl hydrolases family 25
PLDGJAPA_00296 9.7e-231 potE E amino acid
PLDGJAPA_00297 0.0 1.3.5.4 C FAD binding domain
PLDGJAPA_00298 5.8e-49 L PFAM transposase, IS4 family protein
PLDGJAPA_00301 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
PLDGJAPA_00302 1.4e-36 S Cytochrome B5
PLDGJAPA_00303 1e-167 arbZ I Phosphate acyltransferases
PLDGJAPA_00304 1.3e-181 arbY M Glycosyl transferase family 8
PLDGJAPA_00305 3.4e-185 arbY M Glycosyl transferase family 8
PLDGJAPA_00306 2.3e-156 arbx M Glycosyl transferase family 8
PLDGJAPA_00307 1.4e-149 arbV 2.3.1.51 I Acyl-transferase
PLDGJAPA_00309 4.9e-34
PLDGJAPA_00311 4.8e-131 K response regulator
PLDGJAPA_00312 2.9e-305 vicK 2.7.13.3 T Histidine kinase
PLDGJAPA_00313 1.4e-256 yycH S YycH protein
PLDGJAPA_00314 1e-148 yycI S YycH protein
PLDGJAPA_00315 8.2e-148 vicX 3.1.26.11 S domain protein
PLDGJAPA_00316 3.3e-151 htrA 3.4.21.107 O serine protease
PLDGJAPA_00317 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PLDGJAPA_00318 6.5e-104 G Peptidase_C39 like family
PLDGJAPA_00319 4.9e-167 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PLDGJAPA_00320 5.8e-75 P Cobalt transport protein
PLDGJAPA_00321 8.8e-243 cbiO1 S ABC transporter, ATP-binding protein
PLDGJAPA_00322 1e-173 K helix_turn_helix, arabinose operon control protein
PLDGJAPA_00323 2.3e-159 htpX O Belongs to the peptidase M48B family
PLDGJAPA_00324 3e-96 lemA S LemA family
PLDGJAPA_00325 9.5e-195 ybiR P Citrate transporter
PLDGJAPA_00326 2.7e-70 S Iron-sulphur cluster biosynthesis
PLDGJAPA_00327 3.5e-308 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PLDGJAPA_00328 1.2e-17
PLDGJAPA_00329 1.9e-110
PLDGJAPA_00331 1e-216 ydaM M Glycosyl transferase
PLDGJAPA_00332 1.8e-177 G Glycosyl hydrolases family 8
PLDGJAPA_00333 1e-119 yfbR S HD containing hydrolase-like enzyme
PLDGJAPA_00334 1.6e-154 L HNH nucleases
PLDGJAPA_00335 1.2e-137 S Protein of unknown function (DUF805)
PLDGJAPA_00336 4e-136 glnQ E ABC transporter, ATP-binding protein
PLDGJAPA_00337 2.4e-284 glnP P ABC transporter permease
PLDGJAPA_00338 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PLDGJAPA_00339 2e-64 yeaO S Protein of unknown function, DUF488
PLDGJAPA_00340 9.6e-125 terC P Integral membrane protein TerC family
PLDGJAPA_00341 3.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PLDGJAPA_00342 1e-133 cobB K SIR2 family
PLDGJAPA_00343 4.2e-86
PLDGJAPA_00344 9.3e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PLDGJAPA_00345 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
PLDGJAPA_00346 9.7e-146 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PLDGJAPA_00347 2e-140 ypuA S Protein of unknown function (DUF1002)
PLDGJAPA_00348 8.3e-156 epsV 2.7.8.12 S glycosyl transferase family 2
PLDGJAPA_00349 3.1e-118 S Alpha/beta hydrolase family
PLDGJAPA_00350 2.1e-80 K Helix-turn-helix domain
PLDGJAPA_00352 4.9e-216 EGP Major Facilitator Superfamily
PLDGJAPA_00353 3.8e-139 noxC 1.5.1.39 C coenzyme F420-1:gamma-L-glutamate ligase activity
PLDGJAPA_00354 9.7e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PLDGJAPA_00355 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
PLDGJAPA_00356 2.8e-135
PLDGJAPA_00357 1.3e-258 glnPH2 P ABC transporter permease
PLDGJAPA_00358 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PLDGJAPA_00359 4.6e-222 S Cysteine-rich secretory protein family
PLDGJAPA_00360 6.9e-198 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PLDGJAPA_00361 3.7e-110
PLDGJAPA_00362 4.1e-201 yibE S overlaps another CDS with the same product name
PLDGJAPA_00363 1.7e-129 yibF S overlaps another CDS with the same product name
PLDGJAPA_00364 1.5e-144 I alpha/beta hydrolase fold
PLDGJAPA_00365 0.0 G Belongs to the glycosyl hydrolase 31 family
PLDGJAPA_00366 1.7e-215 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PLDGJAPA_00367 1.5e-274 S Archaea bacterial proteins of unknown function
PLDGJAPA_00368 5.2e-08
PLDGJAPA_00369 3.6e-90 ntd 2.4.2.6 F Nucleoside
PLDGJAPA_00370 4.6e-88 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PLDGJAPA_00371 2e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
PLDGJAPA_00372 5.2e-84 uspA T universal stress protein
PLDGJAPA_00373 1.2e-150 phnD P Phosphonate ABC transporter
PLDGJAPA_00374 4.1e-136 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PLDGJAPA_00375 8.8e-118 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PLDGJAPA_00376 2.2e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PLDGJAPA_00377 1.5e-106 tag 3.2.2.20 L glycosylase
PLDGJAPA_00378 1.5e-83
PLDGJAPA_00379 1.7e-273 S Calcineurin-like phosphoesterase
PLDGJAPA_00380 0.0 asnB 6.3.5.4 E Asparagine synthase
PLDGJAPA_00381 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
PLDGJAPA_00383 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PLDGJAPA_00384 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PLDGJAPA_00385 2.1e-103 S Iron-sulfur cluster assembly protein
PLDGJAPA_00386 2.6e-230 XK27_04775 S PAS domain
PLDGJAPA_00387 1.6e-211 yttB EGP Major facilitator Superfamily
PLDGJAPA_00388 0.0 pepO 3.4.24.71 O Peptidase family M13
PLDGJAPA_00389 1.2e-171 kup P Transport of potassium into the cell
PLDGJAPA_00390 1.9e-86 L Transposase
PLDGJAPA_00392 4.2e-51 L Transposase
PLDGJAPA_00393 1.2e-120 L UvrD/REP helicase N-terminal domain
PLDGJAPA_00394 1.5e-131 L AAA ATPase domain
PLDGJAPA_00397 1.8e-34 L COG2826 Transposase and inactivated derivatives, IS30 family
PLDGJAPA_00398 2.8e-268 S Uncharacterised protein family (UPF0236)
PLDGJAPA_00399 8.5e-16
PLDGJAPA_00402 1.4e-18 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PLDGJAPA_00405 1.2e-242 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
PLDGJAPA_00406 7.4e-222 L Transposase
PLDGJAPA_00407 4.6e-258 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PLDGJAPA_00408 6e-189 glf 5.4.99.9 M UDP-galactopyranose mutase
PLDGJAPA_00409 5.7e-91 M Glycosyl transferases group 1
PLDGJAPA_00410 3.8e-09 5.1.1.1, 5.1.1.18 I Acyltransferase family
PLDGJAPA_00411 6.5e-69
PLDGJAPA_00412 1.4e-80 M Glycosyl transferase family 2
PLDGJAPA_00413 7.6e-57 M Glycosyltransferase GT-D fold
PLDGJAPA_00414 9.1e-126 waaB GT4 M Glycosyl transferases group 1
PLDGJAPA_00415 1.9e-117 cps1D M Domain of unknown function (DUF4422)
PLDGJAPA_00416 1.4e-121 rfbP M Bacterial sugar transferase
PLDGJAPA_00417 5.3e-144 ywqE 3.1.3.48 GM PHP domain protein
PLDGJAPA_00418 8.1e-124 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PLDGJAPA_00419 1.6e-149 epsB M biosynthesis protein
PLDGJAPA_00420 6.5e-177 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PLDGJAPA_00421 1.3e-47 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
PLDGJAPA_00422 1.3e-41 relB L RelB antitoxin
PLDGJAPA_00424 1.3e-219 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PLDGJAPA_00425 1.3e-174 S Cysteine-rich secretory protein family
PLDGJAPA_00427 2.5e-39
PLDGJAPA_00428 2.6e-118 M NlpC/P60 family
PLDGJAPA_00429 1.4e-136 M NlpC P60 family protein
PLDGJAPA_00430 9.5e-79 M NlpC/P60 family
PLDGJAPA_00431 1.6e-94 gmk2 2.7.4.8 F Guanylate kinase homologues.
PLDGJAPA_00432 9.3e-44
PLDGJAPA_00433 9.4e-278 S O-antigen ligase like membrane protein
PLDGJAPA_00434 3.3e-112
PLDGJAPA_00435 1.9e-77 nrdI F NrdI Flavodoxin like
PLDGJAPA_00436 1.3e-176 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PLDGJAPA_00437 2.5e-68
PLDGJAPA_00438 3.5e-111 yvpB S Peptidase_C39 like family
PLDGJAPA_00439 3.9e-84 S Threonine/Serine exporter, ThrE
PLDGJAPA_00440 4.8e-137 thrE S Putative threonine/serine exporter
PLDGJAPA_00441 4e-292 S ABC transporter
PLDGJAPA_00442 1.1e-62
PLDGJAPA_00443 4.6e-100 rimL J Acetyltransferase (GNAT) domain
PLDGJAPA_00444 6.5e-125 S Protein of unknown function (DUF554)
PLDGJAPA_00445 4.7e-211 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PLDGJAPA_00446 0.0 pepF E oligoendopeptidase F
PLDGJAPA_00447 1.4e-30
PLDGJAPA_00448 4.6e-70 doc S Prophage maintenance system killer protein
PLDGJAPA_00449 4.6e-213 2.1.1.14 E methionine synthase, vitamin-B12 independent
PLDGJAPA_00450 2e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PLDGJAPA_00451 1.6e-264 lctP C L-lactate permease
PLDGJAPA_00452 6.5e-129 znuB U ABC 3 transport family
PLDGJAPA_00453 4.7e-117 fhuC P ABC transporter
PLDGJAPA_00454 1.4e-148 psaA P Belongs to the bacterial solute-binding protein 9 family
PLDGJAPA_00455 1.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
PLDGJAPA_00456 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PLDGJAPA_00457 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PLDGJAPA_00458 1.8e-136 fruR K DeoR C terminal sensor domain
PLDGJAPA_00459 1e-218 natB CP ABC-2 family transporter protein
PLDGJAPA_00460 9.2e-164 natA S ABC transporter, ATP-binding protein
PLDGJAPA_00461 4.9e-29
PLDGJAPA_00462 3.6e-08
PLDGJAPA_00463 4.4e-68
PLDGJAPA_00464 4.8e-25
PLDGJAPA_00465 8.2e-31 yozG K Transcriptional regulator
PLDGJAPA_00466 1.7e-80
PLDGJAPA_00467 2.3e-161 L Transposase and inactivated derivatives, IS30 family
PLDGJAPA_00468 2e-229 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PLDGJAPA_00469 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PLDGJAPA_00470 2.2e-141 xerC D Phage integrase, N-terminal SAM-like domain
PLDGJAPA_00471 2.7e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PLDGJAPA_00472 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PLDGJAPA_00473 2.2e-151 dprA LU DNA protecting protein DprA
PLDGJAPA_00474 5.4e-133 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PLDGJAPA_00475 7.3e-155 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PLDGJAPA_00476 4.7e-163 yjcE P Sodium proton antiporter
PLDGJAPA_00477 8.4e-67 yjcE P NhaP-type Na H and K H
PLDGJAPA_00478 7.1e-36 yozE S Belongs to the UPF0346 family
PLDGJAPA_00479 2e-144 DegV S Uncharacterised protein, DegV family COG1307
PLDGJAPA_00480 2e-107 hlyIII S protein, hemolysin III
PLDGJAPA_00481 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PLDGJAPA_00482 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PLDGJAPA_00483 5.6e-86 3.4.21.96 S SLAP domain
PLDGJAPA_00484 9.9e-182 yagE E Amino acid permease
PLDGJAPA_00485 1.2e-149 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
PLDGJAPA_00486 1.8e-144 2.4.2.3 F Phosphorylase superfamily
PLDGJAPA_00487 6.9e-144 2.4.2.3 F Phosphorylase superfamily
PLDGJAPA_00488 9.3e-81 S AAA domain
PLDGJAPA_00489 7.1e-119 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
PLDGJAPA_00490 1.8e-55 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
PLDGJAPA_00491 6.1e-73 yxaM EGP Major facilitator Superfamily
PLDGJAPA_00492 3.8e-52 yxaM EGP Major facilitator Superfamily
PLDGJAPA_00493 5.8e-138 S Alpha/beta hydrolase family
PLDGJAPA_00494 9e-87 rimL J Acetyltransferase (GNAT) domain
PLDGJAPA_00495 5.1e-230
PLDGJAPA_00496 7.3e-108 glsA 3.5.1.2 E Belongs to the glutaminase family
PLDGJAPA_00497 7.5e-116 S Fic/DOC family
PLDGJAPA_00498 2.1e-23 S Protein of unknown function (DUF3923)
PLDGJAPA_00499 1.2e-58
PLDGJAPA_00500 6.9e-47 S MazG-like family
PLDGJAPA_00501 2e-149 S Protein of unknown function (DUF2785)
PLDGJAPA_00502 1.4e-78
PLDGJAPA_00503 6.9e-106 speG J Acetyltransferase (GNAT) domain
PLDGJAPA_00504 2.2e-49
PLDGJAPA_00505 1.3e-282 V ABC transporter transmembrane region
PLDGJAPA_00506 5.8e-288 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PLDGJAPA_00507 1e-229 S Tetratricopeptide repeat protein
PLDGJAPA_00508 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PLDGJAPA_00509 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PLDGJAPA_00510 1.6e-211 rpsA 1.17.7.4 J Ribosomal protein S1
PLDGJAPA_00511 1.2e-112 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PLDGJAPA_00512 2.7e-18 M Lysin motif
PLDGJAPA_00513 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PLDGJAPA_00514 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PLDGJAPA_00515 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PLDGJAPA_00516 1e-131 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PLDGJAPA_00517 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PLDGJAPA_00518 7.6e-166 xerD D recombinase XerD
PLDGJAPA_00519 1.8e-167 cvfB S S1 domain
PLDGJAPA_00520 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PLDGJAPA_00521 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PLDGJAPA_00522 0.0 dnaE 2.7.7.7 L DNA polymerase
PLDGJAPA_00523 2.3e-23 S Protein of unknown function (DUF2929)
PLDGJAPA_00524 2.8e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PLDGJAPA_00525 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PLDGJAPA_00526 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
PLDGJAPA_00527 1.6e-143 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PLDGJAPA_00528 5.8e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PLDGJAPA_00529 1.1e-294 I Acyltransferase
PLDGJAPA_00530 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PLDGJAPA_00531 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PLDGJAPA_00532 1.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
PLDGJAPA_00533 4.8e-244 yfnA E Amino Acid
PLDGJAPA_00534 8e-182 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PLDGJAPA_00535 5.2e-150 yxeH S hydrolase
PLDGJAPA_00536 2.9e-156 S reductase
PLDGJAPA_00537 7.3e-217 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PLDGJAPA_00539 3.4e-222 patA 2.6.1.1 E Aminotransferase
PLDGJAPA_00540 5.3e-23
PLDGJAPA_00541 5.3e-23
PLDGJAPA_00542 1.7e-226 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PLDGJAPA_00543 1.9e-112 plsC 2.3.1.51 I Acyltransferase
PLDGJAPA_00544 1.5e-189 yabB 2.1.1.223 L Methyltransferase small domain
PLDGJAPA_00545 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
PLDGJAPA_00546 8.3e-185 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PLDGJAPA_00547 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PLDGJAPA_00548 2e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PLDGJAPA_00549 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PLDGJAPA_00550 1.5e-141 cdsA 2.7.7.41 I Belongs to the CDS family
PLDGJAPA_00551 3.4e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PLDGJAPA_00552 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PLDGJAPA_00553 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PLDGJAPA_00554 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
PLDGJAPA_00555 4.9e-197 nusA K Participates in both transcription termination and antitermination
PLDGJAPA_00556 8.8e-47 ylxR K Protein of unknown function (DUF448)
PLDGJAPA_00557 3.2e-47 rplGA J ribosomal protein
PLDGJAPA_00558 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PLDGJAPA_00559 3e-60 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PLDGJAPA_00560 3.4e-158 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PLDGJAPA_00561 1.7e-176 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PLDGJAPA_00562 4.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PLDGJAPA_00563 2.3e-67 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PLDGJAPA_00564 0.0 dnaK O Heat shock 70 kDa protein
PLDGJAPA_00565 5.8e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PLDGJAPA_00566 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PLDGJAPA_00567 5.9e-102 srtA 3.4.22.70 M sortase family
PLDGJAPA_00568 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PLDGJAPA_00569 4.5e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PLDGJAPA_00570 1.6e-201 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PLDGJAPA_00571 5.5e-211 S Bacterial protein of unknown function (DUF871)
PLDGJAPA_00573 4.5e-25 ybhL S Belongs to the BI1 family
PLDGJAPA_00574 1.5e-49 S Metal binding domain of Ada
PLDGJAPA_00575 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PLDGJAPA_00576 9e-137 lysR5 K LysR substrate binding domain
PLDGJAPA_00577 1.8e-234 arcA 3.5.3.6 E Arginine
PLDGJAPA_00578 8.7e-97 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PLDGJAPA_00579 1.2e-67 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
PLDGJAPA_00580 1.3e-96 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PLDGJAPA_00581 3e-215 S Sterol carrier protein domain
PLDGJAPA_00582 1e-20
PLDGJAPA_00583 2e-109 K LysR substrate binding domain
PLDGJAPA_00584 2.6e-97
PLDGJAPA_00585 1.9e-118 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PLDGJAPA_00586 8e-95
PLDGJAPA_00587 3.1e-287 V ABC-type multidrug transport system, ATPase and permease components
PLDGJAPA_00588 2e-283 V ABC-type multidrug transport system, ATPase and permease components
PLDGJAPA_00589 7.1e-74
PLDGJAPA_00590 2e-64 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
PLDGJAPA_00591 2.4e-69 hipB K sequence-specific DNA binding
PLDGJAPA_00592 7.7e-40 S SnoaL-like domain
PLDGJAPA_00593 0.0 L PLD-like domain
PLDGJAPA_00594 1.5e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
PLDGJAPA_00595 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PLDGJAPA_00596 9.5e-283 thrC 4.2.3.1 E Threonine synthase
PLDGJAPA_00597 1.5e-220 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PLDGJAPA_00598 5e-159 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PLDGJAPA_00599 1.8e-116
PLDGJAPA_00600 9.6e-158 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PLDGJAPA_00601 2.6e-103 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PLDGJAPA_00602 2e-16 S ASCH domain
PLDGJAPA_00603 8.6e-33 S ASCH domain
PLDGJAPA_00604 4.6e-70 4.4.1.5 E lactoylglutathione lyase activity
PLDGJAPA_00606 5.6e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PLDGJAPA_00607 1.7e-129 manY G PTS system
PLDGJAPA_00608 1e-173 manN G system, mannose fructose sorbose family IID component
PLDGJAPA_00609 9.9e-64 manO S Domain of unknown function (DUF956)
PLDGJAPA_00610 8.7e-159 K Transcriptional regulator
PLDGJAPA_00611 2.4e-81 maa S transferase hexapeptide repeat
PLDGJAPA_00612 2e-242 cycA E Amino acid permease
PLDGJAPA_00613 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PLDGJAPA_00614 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PLDGJAPA_00615 4e-53 yagE E amino acid
PLDGJAPA_00616 2.2e-115 4.1.1.44 S Carboxymuconolactone decarboxylase family
PLDGJAPA_00617 6.2e-32
PLDGJAPA_00618 6.7e-69 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PLDGJAPA_00619 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PLDGJAPA_00620 0.0 S TerB-C domain
PLDGJAPA_00621 5.4e-253 P P-loop Domain of unknown function (DUF2791)
PLDGJAPA_00622 0.0 lhr L DEAD DEAH box helicase
PLDGJAPA_00623 2.2e-55
PLDGJAPA_00624 1.3e-19 S Protein of unknown function (DUF3021)
PLDGJAPA_00625 1.3e-41 K LytTr DNA-binding domain
PLDGJAPA_00626 3.7e-142 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PLDGJAPA_00628 1.7e-200 amtB P ammonium transporter
PLDGJAPA_00630 1.5e-169 yjjC V ABC transporter
PLDGJAPA_00631 6.5e-293 M Exporter of polyketide antibiotics
PLDGJAPA_00632 9.6e-115 K Transcriptional regulator
PLDGJAPA_00633 6.7e-99 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PLDGJAPA_00634 1.2e-59 dam 2.1.1.72 H Site-specific DNA-methyltransferase (adenine-specific)
PLDGJAPA_00635 2.2e-35 S Abortive infection C-terminus
PLDGJAPA_00636 4.9e-91 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
PLDGJAPA_00637 3.1e-118 dcm 2.1.1.37, 2.1.1.72 L C-5 cytosine-specific DNA methylase
PLDGJAPA_00638 5.1e-71 V AAA domain (dynein-related subfamily)
PLDGJAPA_00639 3e-32 S LlaJI restriction endonuclease
PLDGJAPA_00640 3.3e-48 psiE S Phosphate-starvation-inducible E
PLDGJAPA_00641 1.3e-113 yncA 2.3.1.79 S Maltose acetyltransferase
PLDGJAPA_00642 1.5e-70 S Iron-sulphur cluster biosynthesis
PLDGJAPA_00644 2.3e-30
PLDGJAPA_00645 3.6e-173 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PLDGJAPA_00646 6.2e-12
PLDGJAPA_00648 1.7e-99 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLDGJAPA_00649 6.6e-29 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLDGJAPA_00650 3.4e-78 M LysM domain protein
PLDGJAPA_00651 1.5e-160 D nuclear chromosome segregation
PLDGJAPA_00652 1.2e-105 G Phosphoglycerate mutase family
PLDGJAPA_00653 2.6e-89 G Histidine phosphatase superfamily (branch 1)
PLDGJAPA_00654 4.9e-114 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PLDGJAPA_00655 1.2e-129 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PLDGJAPA_00656 1.6e-182 msmR K helix_turn _helix lactose operon repressor
PLDGJAPA_00657 8.2e-230 msmE G Bacterial extracellular solute-binding protein
PLDGJAPA_00658 3.8e-162 msmF P ABC-type sugar transport systems, permease components
PLDGJAPA_00659 4.2e-150 msmG G Binding-protein-dependent transport system inner membrane component
PLDGJAPA_00660 4.2e-218 sacA 3.2.1.26 GH32 G Glycosyl hydrolases family 32
PLDGJAPA_00661 1.1e-211 msmX P Belongs to the ABC transporter superfamily
PLDGJAPA_00662 3.6e-271 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PLDGJAPA_00664 2.3e-24
PLDGJAPA_00665 2.5e-08 S Protein of unknown function (DUF3021)
PLDGJAPA_00667 2.2e-100 rbtT P Major Facilitator Superfamily
PLDGJAPA_00668 1.9e-203 XK27_00915 C Luciferase-like monooxygenase
PLDGJAPA_00669 1.3e-87 K GNAT family
PLDGJAPA_00670 2.8e-125 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PLDGJAPA_00672 5.1e-37
PLDGJAPA_00673 3.1e-287 P ABC transporter
PLDGJAPA_00674 2.2e-277 V ABC-type multidrug transport system, ATPase and permease components
PLDGJAPA_00675 2e-250 yifK E Amino acid permease
PLDGJAPA_00676 2.4e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PLDGJAPA_00677 1.2e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PLDGJAPA_00678 0.0 aha1 P E1-E2 ATPase
PLDGJAPA_00679 5.8e-177 F DNA/RNA non-specific endonuclease
PLDGJAPA_00680 1e-159 metQ2 P Belongs to the nlpA lipoprotein family
PLDGJAPA_00681 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PLDGJAPA_00682 2e-73 metI P ABC transporter permease
PLDGJAPA_00683 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PLDGJAPA_00684 1.9e-261 frdC 1.3.5.4 C FAD binding domain
PLDGJAPA_00685 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PLDGJAPA_00686 2e-255 pepC 3.4.22.40 E Peptidase C1-like family
PLDGJAPA_00687 1.7e-133 hxlA 6.2.1.3 H Aldolase/RraA
PLDGJAPA_00688 1.8e-273 P Sodium:sulfate symporter transmembrane region
PLDGJAPA_00689 3.8e-153 ydjP I Alpha/beta hydrolase family
PLDGJAPA_00690 2.2e-196 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PLDGJAPA_00691 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
PLDGJAPA_00692 2.4e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PLDGJAPA_00693 1.1e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PLDGJAPA_00694 9.3e-72 yeaL S Protein of unknown function (DUF441)
PLDGJAPA_00695 1.8e-22
PLDGJAPA_00696 3.6e-146 cbiQ P cobalt transport
PLDGJAPA_00697 0.0 ykoD P ABC transporter, ATP-binding protein
PLDGJAPA_00698 1.5e-95 S UPF0397 protein
PLDGJAPA_00699 7.1e-65 S Domain of unknown function DUF1828
PLDGJAPA_00700 4.2e-50
PLDGJAPA_00701 2.6e-177 citR K Putative sugar-binding domain
PLDGJAPA_00702 1.9e-250 yjjP S Putative threonine/serine exporter
PLDGJAPA_00703 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PLDGJAPA_00704 6.5e-176 prmA J Ribosomal protein L11 methyltransferase
PLDGJAPA_00705 2.9e-60
PLDGJAPA_00706 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PLDGJAPA_00707 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PLDGJAPA_00708 4.4e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PLDGJAPA_00709 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PLDGJAPA_00710 6.7e-51 L Transposase IS66 family
PLDGJAPA_00711 8e-164
PLDGJAPA_00712 0.0 ydgH S MMPL family
PLDGJAPA_00713 2.3e-99 yobS K Bacterial regulatory proteins, tetR family
PLDGJAPA_00714 8.8e-149 3.5.2.6 V Beta-lactamase enzyme family
PLDGJAPA_00715 1.8e-154 corA P CorA-like Mg2+ transporter protein
PLDGJAPA_00716 2.3e-240 G Bacterial extracellular solute-binding protein
PLDGJAPA_00717 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PLDGJAPA_00718 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
PLDGJAPA_00719 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
PLDGJAPA_00720 1.9e-203 malK P ATPases associated with a variety of cellular activities
PLDGJAPA_00721 1.8e-283 pipD E Dipeptidase
PLDGJAPA_00722 1.9e-158 endA F DNA RNA non-specific endonuclease
PLDGJAPA_00723 1.8e-181 dnaQ 2.7.7.7 L EXOIII
PLDGJAPA_00724 9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PLDGJAPA_00725 3e-116 yviA S Protein of unknown function (DUF421)
PLDGJAPA_00726 1.1e-72 S Protein of unknown function (DUF3290)
PLDGJAPA_00727 9e-141 pnuC H nicotinamide mononucleotide transporter
PLDGJAPA_00728 1.8e-13
PLDGJAPA_00729 4.6e-129 S PAS domain
PLDGJAPA_00730 1.3e-277 V ABC transporter transmembrane region
PLDGJAPA_00731 4.6e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PLDGJAPA_00732 3.1e-130 T Transcriptional regulatory protein, C terminal
PLDGJAPA_00733 1.4e-245 T GHKL domain
PLDGJAPA_00734 1.5e-87 S Peptidase propeptide and YPEB domain
PLDGJAPA_00735 2.3e-102 S Peptidase propeptide and YPEB domain
PLDGJAPA_00736 1.3e-96 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PLDGJAPA_00737 2.1e-76 yybA 2.3.1.57 K Transcriptional regulator
PLDGJAPA_00738 0.0 oppA3 E ABC transporter, substratebinding protein
PLDGJAPA_00739 6.4e-61 ypaA S Protein of unknown function (DUF1304)
PLDGJAPA_00740 9.8e-98 S Peptidase propeptide and YPEB domain
PLDGJAPA_00741 4.4e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PLDGJAPA_00742 5.7e-161 coaA 2.7.1.33 F Pantothenic acid kinase
PLDGJAPA_00743 1.2e-97 E GDSL-like Lipase/Acylhydrolase
PLDGJAPA_00744 1.3e-78 yjcF S Acetyltransferase (GNAT) domain
PLDGJAPA_00745 3.9e-145 aatB ET ABC transporter substrate-binding protein
PLDGJAPA_00746 6e-106 glnQ 3.6.3.21 E ABC transporter
PLDGJAPA_00747 2.6e-110 glnP P ABC transporter permease
PLDGJAPA_00748 0.0 helD 3.6.4.12 L DNA helicase
PLDGJAPA_00749 1.7e-123 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PLDGJAPA_00750 1.4e-126 pgm3 G Phosphoglycerate mutase family
PLDGJAPA_00751 1.2e-241 S response to antibiotic
PLDGJAPA_00752 5.4e-124
PLDGJAPA_00753 0.0 3.6.3.8 P P-type ATPase
PLDGJAPA_00754 3.3e-65 2.7.1.191 G PTS system fructose IIA component
PLDGJAPA_00755 6.3e-179 L Transposase and inactivated derivatives, IS30 family
PLDGJAPA_00756 4.3e-173 MA20_14895 S Conserved hypothetical protein 698
PLDGJAPA_00757 3.1e-67 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PLDGJAPA_00758 1.9e-283 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PLDGJAPA_00759 1.2e-30 copZ C Heavy-metal-associated domain
PLDGJAPA_00760 1.6e-78 dps P Belongs to the Dps family
PLDGJAPA_00761 1.9e-86 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PLDGJAPA_00762 2e-129 yobV1 K WYL domain
PLDGJAPA_00763 1.8e-55 S pyridoxamine 5-phosphate
PLDGJAPA_00764 3.8e-84 dps P Belongs to the Dps family
PLDGJAPA_00765 5.6e-101 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PLDGJAPA_00766 2.9e-70 S Putative adhesin
PLDGJAPA_00767 1.7e-78 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
PLDGJAPA_00768 6.7e-235 mepA V MATE efflux family protein
PLDGJAPA_00769 2.2e-61 L An automated process has identified a potential problem with this gene model
PLDGJAPA_00771 3.2e-84 S ABC-type cobalt transport system, permease component
PLDGJAPA_00772 2.6e-70 3.5.1.28 UW LPXTG-motif cell wall anchor domain protein
PLDGJAPA_00773 0.0 UW LPXTG-motif cell wall anchor domain protein
PLDGJAPA_00774 1.4e-16 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PLDGJAPA_00775 4.8e-79 M Peptidase family M1 domain
PLDGJAPA_00776 7.7e-152
PLDGJAPA_00778 9.7e-247 ydaM M Glycosyl transferase
PLDGJAPA_00779 6.5e-204 G Glycosyl hydrolases family 8
PLDGJAPA_00780 4e-94 L Transposase and inactivated derivatives, IS30 family
PLDGJAPA_00781 8.3e-12 L Transposase and inactivated derivatives, IS30 family
PLDGJAPA_00782 2.4e-10 L Psort location Cytoplasmic, score
PLDGJAPA_00783 1e-30 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PLDGJAPA_00784 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PLDGJAPA_00785 6.3e-229 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PLDGJAPA_00786 4.4e-106 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PLDGJAPA_00787 6.6e-201 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PLDGJAPA_00788 5.7e-121 lsa S ABC transporter
PLDGJAPA_00789 2.8e-112 S Protein of unknown function (DUF1211)
PLDGJAPA_00790 4.8e-76 ltrA S Bacterial low temperature requirement A protein (LtrA)
PLDGJAPA_00791 6.9e-118 3.6.1.55 F NUDIX domain
PLDGJAPA_00792 1.5e-245 brnQ U Component of the transport system for branched-chain amino acids
PLDGJAPA_00793 1.3e-162 L Plasmid pRiA4b ORF-3-like protein
PLDGJAPA_00794 1.8e-180 lacX 5.1.3.3 G Aldose 1-epimerase
PLDGJAPA_00795 5.1e-74 C Aldo keto reductase
PLDGJAPA_00796 5.4e-63 M LysM domain protein
PLDGJAPA_00797 1.1e-152 xerD L Phage integrase, N-terminal SAM-like domain
PLDGJAPA_00798 7.9e-67 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PLDGJAPA_00799 2e-64 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PLDGJAPA_00800 3.3e-11 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PLDGJAPA_00801 1.8e-115 mmuP E amino acid
PLDGJAPA_00802 2e-274 pepV 3.5.1.18 E dipeptidase PepV
PLDGJAPA_00803 3.4e-45 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PLDGJAPA_00804 1.7e-284 E Amino acid permease
PLDGJAPA_00805 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PLDGJAPA_00806 9.3e-247 ynbB 4.4.1.1 P aluminum resistance
PLDGJAPA_00807 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PLDGJAPA_00808 3.4e-82 C Flavodoxin
PLDGJAPA_00809 0.0 uvrA3 L excinuclease ABC, A subunit
PLDGJAPA_00810 4.5e-188 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PLDGJAPA_00811 1.8e-113 3.6.1.27 I Acid phosphatase homologues
PLDGJAPA_00812 4.1e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PLDGJAPA_00813 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
PLDGJAPA_00814 1.2e-203 pbpX1 V Beta-lactamase
PLDGJAPA_00815 5.1e-100 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PLDGJAPA_00816 7.5e-95 S ECF-type riboflavin transporter, S component
PLDGJAPA_00817 2e-230 S Putative peptidoglycan binding domain
PLDGJAPA_00818 1.5e-82 K Acetyltransferase (GNAT) domain
PLDGJAPA_00819 6.4e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PLDGJAPA_00820 1.9e-191 yrvN L AAA C-terminal domain
PLDGJAPA_00821 2.8e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PLDGJAPA_00822 5.4e-46 treB G phosphotransferase system
PLDGJAPA_00823 8.3e-185 G Bacterial extracellular solute-binding protein
PLDGJAPA_00824 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
PLDGJAPA_00825 7.7e-238 XK27_01810 S Calcineurin-like phosphoesterase
PLDGJAPA_00828 2e-29 S CAAX amino terminal protease
PLDGJAPA_00830 3.4e-267 hsdM 2.1.1.72 V type I restriction-modification system
PLDGJAPA_00831 4e-20 L PFAM transposase, IS4 family protein
PLDGJAPA_00832 0.0 1.3.5.4 C FAD binding domain
PLDGJAPA_00833 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PLDGJAPA_00834 2.2e-249 yhdP S Transporter associated domain
PLDGJAPA_00835 2.3e-119 C nitroreductase
PLDGJAPA_00836 2.1e-39
PLDGJAPA_00837 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PLDGJAPA_00838 1.7e-79
PLDGJAPA_00839 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
PLDGJAPA_00840 0.0 glvC 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
PLDGJAPA_00841 1.6e-151 S hydrolase
PLDGJAPA_00842 2.6e-160 rssA S Phospholipase, patatin family
PLDGJAPA_00843 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PLDGJAPA_00844 1.6e-137 glcR K DeoR C terminal sensor domain
PLDGJAPA_00845 5.5e-59 S Enterocin A Immunity
PLDGJAPA_00846 1.2e-154 S hydrolase
PLDGJAPA_00847 3e-133 ydhQ K UbiC transcription regulator-associated domain protein
PLDGJAPA_00848 3.1e-175 rihB 3.2.2.1 F Nucleoside
PLDGJAPA_00849 0.0 kup P Transport of potassium into the cell
PLDGJAPA_00850 1.4e-124 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PLDGJAPA_00851 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PLDGJAPA_00852 2.9e-161 2.7.7.12 C Domain of unknown function (DUF4931)
PLDGJAPA_00853 2.9e-235 G Bacterial extracellular solute-binding protein
PLDGJAPA_00854 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
PLDGJAPA_00855 5.6e-86
PLDGJAPA_00856 9.6e-191 oppA2 E Bacterial extracellular solute-binding proteins, family 5 Middle
PLDGJAPA_00857 4.4e-82 S Uncharacterized protein conserved in bacteria (DUF2263)
PLDGJAPA_00858 1.1e-112 S SLAP domain
PLDGJAPA_00859 5.4e-88
PLDGJAPA_00860 3e-09 isdH M Iron Transport-associated domain
PLDGJAPA_00861 5.7e-124 M Iron Transport-associated domain
PLDGJAPA_00862 6.7e-159 isdE P Periplasmic binding protein
PLDGJAPA_00863 5.1e-149 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PLDGJAPA_00864 4.7e-140 fhuC 3.6.3.34 HP abc transporter atp-binding protein
PLDGJAPA_00865 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PLDGJAPA_00866 1.2e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PLDGJAPA_00867 1.3e-38 S RelB antitoxin
PLDGJAPA_00868 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PLDGJAPA_00869 0.0 S membrane
PLDGJAPA_00870 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PLDGJAPA_00871 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PLDGJAPA_00872 2.1e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PLDGJAPA_00873 5.3e-119 gluP 3.4.21.105 S Rhomboid family
PLDGJAPA_00874 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
PLDGJAPA_00875 1.5e-65 yqhL P Rhodanese-like protein
PLDGJAPA_00876 1.6e-169 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PLDGJAPA_00877 8.4e-224 ynbB 4.4.1.1 P aluminum resistance
PLDGJAPA_00878 4.4e-263 glnA 6.3.1.2 E glutamine synthetase
PLDGJAPA_00879 1.3e-170
PLDGJAPA_00880 1.4e-144
PLDGJAPA_00881 2.4e-13 hicA S HicA toxin of bacterial toxin-antitoxin,
PLDGJAPA_00882 3.1e-32 S protein encoded in hypervariable junctions of pilus gene clusters
PLDGJAPA_00884 8.9e-33
PLDGJAPA_00885 4e-212 tnpB L Putative transposase DNA-binding domain
PLDGJAPA_00886 5.4e-263 E ABC transporter, substratebinding protein
PLDGJAPA_00888 2.4e-36 L An automated process has identified a potential problem with this gene model
PLDGJAPA_00889 5.5e-50 L An automated process has identified a potential problem with this gene model
PLDGJAPA_00890 6.5e-252 E Amino acid permease
PLDGJAPA_00891 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PLDGJAPA_00892 1.4e-62
PLDGJAPA_00893 3.5e-260 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PLDGJAPA_00894 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PLDGJAPA_00895 3.6e-177 lacI3 K helix_turn _helix lactose operon repressor
PLDGJAPA_00896 6.3e-232 malE G Bacterial extracellular solute-binding protein
PLDGJAPA_00897 0.0 O Belongs to the peptidase S8 family
PLDGJAPA_00898 2e-175 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PLDGJAPA_00899 1.5e-93 dhaL 2.7.1.121 S Dak2
PLDGJAPA_00900 1.7e-55 dhaM 2.7.1.121 S PTS system fructose IIA component
PLDGJAPA_00901 2e-121 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PLDGJAPA_00902 1.2e-188 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PLDGJAPA_00903 1.2e-182 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PLDGJAPA_00904 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PLDGJAPA_00905 2.5e-186 lacR K Transcriptional regulator
PLDGJAPA_00906 0.0 lacS G Transporter
PLDGJAPA_00907 0.0 lacZ 3.2.1.23 G -beta-galactosidase
PLDGJAPA_00908 1.3e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PLDGJAPA_00909 8.2e-287 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PLDGJAPA_00910 4.8e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PLDGJAPA_00911 5.5e-36
PLDGJAPA_00912 1.9e-159 scrR K Periplasmic binding protein domain
PLDGJAPA_00913 4.2e-239 msmE G Bacterial extracellular solute-binding protein
PLDGJAPA_00914 6.2e-157 msmF P Binding-protein-dependent transport system inner membrane component
PLDGJAPA_00915 6.8e-153 msmG P Binding-protein-dependent transport system inner membrane component
PLDGJAPA_00916 8e-210 msmX P Belongs to the ABC transporter superfamily
PLDGJAPA_00917 0.0 rafA 3.2.1.22 G alpha-galactosidase
PLDGJAPA_00918 1.1e-280 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PLDGJAPA_00919 8.6e-113 2.7.6.5 T Region found in RelA / SpoT proteins
PLDGJAPA_00920 3.6e-104 K response regulator
PLDGJAPA_00921 3.3e-223 sptS 2.7.13.3 T Histidine kinase
PLDGJAPA_00922 1.2e-208 EGP Major facilitator Superfamily
PLDGJAPA_00923 5e-69 O OsmC-like protein
PLDGJAPA_00924 5.5e-89 S Protein of unknown function (DUF805)
PLDGJAPA_00925 1.7e-78
PLDGJAPA_00926 2.7e-282
PLDGJAPA_00927 1.9e-275 yjeM E Amino Acid
PLDGJAPA_00928 4.4e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PLDGJAPA_00929 1.7e-243 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PLDGJAPA_00930 4.8e-135 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PLDGJAPA_00931 1.3e-51 S Iron-sulfur cluster assembly protein
PLDGJAPA_00932 3.8e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PLDGJAPA_00933 3.4e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PLDGJAPA_00934 5.9e-43
PLDGJAPA_00935 1.2e-285 lsa S ABC transporter
PLDGJAPA_00936 3.7e-76 clcA P chloride
PLDGJAPA_00937 3.2e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PLDGJAPA_00938 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PLDGJAPA_00939 2.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PLDGJAPA_00940 3.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PLDGJAPA_00941 1.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PLDGJAPA_00942 4.4e-244 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PLDGJAPA_00943 2.7e-210 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PLDGJAPA_00944 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PLDGJAPA_00945 1.5e-251 lctP C L-lactate permease
PLDGJAPA_00946 1.4e-148 glcU U sugar transport
PLDGJAPA_00947 7.1e-46
PLDGJAPA_00948 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PLDGJAPA_00949 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PLDGJAPA_00950 5.5e-40 S Alpha beta hydrolase
PLDGJAPA_00951 1.9e-37
PLDGJAPA_00952 2.6e-52
PLDGJAPA_00953 4.9e-148 S haloacid dehalogenase-like hydrolase
PLDGJAPA_00954 5.4e-292 V ABC-type multidrug transport system, ATPase and permease components
PLDGJAPA_00955 1.5e-278 V ABC-type multidrug transport system, ATPase and permease components
PLDGJAPA_00956 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
PLDGJAPA_00957 2.9e-178 I Carboxylesterase family
PLDGJAPA_00959 8.4e-208 M Glycosyl hydrolases family 25
PLDGJAPA_00960 2.1e-160 cinI S Serine hydrolase (FSH1)
PLDGJAPA_00961 1.2e-300 S Predicted membrane protein (DUF2207)
PLDGJAPA_00962 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PLDGJAPA_00965 2e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
PLDGJAPA_00966 1.1e-150 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PLDGJAPA_00967 2.9e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
PLDGJAPA_00968 2.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PLDGJAPA_00969 3e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PLDGJAPA_00970 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PLDGJAPA_00971 3.4e-71 yqhY S Asp23 family, cell envelope-related function
PLDGJAPA_00972 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PLDGJAPA_00973 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PLDGJAPA_00974 6.4e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PLDGJAPA_00975 6.4e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PLDGJAPA_00976 2.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PLDGJAPA_00977 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PLDGJAPA_00978 2.6e-300 recN L May be involved in recombinational repair of damaged DNA
PLDGJAPA_00979 1.1e-77 6.3.3.2 S ASCH
PLDGJAPA_00980 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PLDGJAPA_00981 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PLDGJAPA_00982 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PLDGJAPA_00983 1.9e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PLDGJAPA_00984 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PLDGJAPA_00985 1.3e-139 stp 3.1.3.16 T phosphatase
PLDGJAPA_00986 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PLDGJAPA_00987 3.3e-166 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PLDGJAPA_00988 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PLDGJAPA_00989 1.4e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
PLDGJAPA_00990 1.8e-30
PLDGJAPA_00991 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PLDGJAPA_00992 4e-57 asp S Asp23 family, cell envelope-related function
PLDGJAPA_00993 2e-305 yloV S DAK2 domain fusion protein YloV
PLDGJAPA_00994 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PLDGJAPA_00995 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PLDGJAPA_00996 2.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PLDGJAPA_00997 1.1e-192 oppD P Belongs to the ABC transporter superfamily
PLDGJAPA_00998 8.8e-168 oppF P Belongs to the ABC transporter superfamily
PLDGJAPA_00999 7.5e-172 oppB P ABC transporter permease
PLDGJAPA_01000 6.2e-131 oppC P Binding-protein-dependent transport system inner membrane component
PLDGJAPA_01001 1.5e-306 oppA E ABC transporter substrate-binding protein
PLDGJAPA_01002 3e-310 oppA E ABC transporter substrate-binding protein
PLDGJAPA_01003 2.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PLDGJAPA_01004 0.0 smc D Required for chromosome condensation and partitioning
PLDGJAPA_01005 7.8e-164 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PLDGJAPA_01006 5.5e-288 pipD E Dipeptidase
PLDGJAPA_01007 2.4e-133 cysA V ABC transporter, ATP-binding protein
PLDGJAPA_01008 0.0 V FtsX-like permease family
PLDGJAPA_01009 2.2e-260 yfnA E amino acid
PLDGJAPA_01010 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PLDGJAPA_01011 5.8e-229 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PLDGJAPA_01012 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PLDGJAPA_01013 2.6e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PLDGJAPA_01014 5e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PLDGJAPA_01015 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PLDGJAPA_01016 3.8e-215 S SLAP domain
PLDGJAPA_01017 4.9e-122 ung2 3.2.2.27 L Uracil-DNA glycosylase
PLDGJAPA_01018 3.7e-145 E GDSL-like Lipase/Acylhydrolase family
PLDGJAPA_01019 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PLDGJAPA_01020 3e-38 ynzC S UPF0291 protein
PLDGJAPA_01021 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
PLDGJAPA_01022 0.0 mdlA V ABC transporter
PLDGJAPA_01023 0.0 mdlB V ABC transporter
PLDGJAPA_01024 0.0 pepO 3.4.24.71 O Peptidase family M13
PLDGJAPA_01025 3.1e-22 npr 1.11.1.1 C NADH oxidase
PLDGJAPA_01026 1.4e-83 dps P Belongs to the Dps family
PLDGJAPA_01027 0.0 oppA E ABC transporter substrate-binding protein
PLDGJAPA_01028 3.4e-136 S SLAP domain
PLDGJAPA_01029 7.7e-88 L An automated process has identified a potential problem with this gene model
PLDGJAPA_01030 1.2e-109 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
PLDGJAPA_01031 6.7e-64
PLDGJAPA_01033 7.5e-146 L COG2826 Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01034 1.2e-17 L COG2826 Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01035 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
PLDGJAPA_01036 1.5e-22 S Bacterial protein of unknown function (DUF871)
PLDGJAPA_01037 1.1e-40 S Bacterial protein of unknown function (DUF871)
PLDGJAPA_01038 4e-44 S polysaccharide biosynthetic process
PLDGJAPA_01040 4.7e-105 3.2.2.20 K acetyltransferase
PLDGJAPA_01041 1.6e-91 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PLDGJAPA_01042 8.4e-24
PLDGJAPA_01043 4e-153
PLDGJAPA_01044 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PLDGJAPA_01045 1.8e-136 glvR K Helix-turn-helix domain, rpiR family
PLDGJAPA_01046 1.5e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
PLDGJAPA_01047 7.7e-09
PLDGJAPA_01048 1.3e-78 L Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01049 1.5e-163 L COG2826 Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01050 4.4e-38 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PLDGJAPA_01051 1.8e-51 K Acetyltransferase (GNAT) family
PLDGJAPA_01052 2.6e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PLDGJAPA_01053 6.2e-94 dps P Belongs to the Dps family
PLDGJAPA_01054 2.3e-34 copZ C Heavy-metal-associated domain
PLDGJAPA_01055 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PLDGJAPA_01056 2.7e-152 L transposase activity
PLDGJAPA_01057 8.2e-88 V ABC-type multidrug transport system, ATPase and permease components
PLDGJAPA_01058 2.4e-195 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PLDGJAPA_01059 4.4e-106 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PLDGJAPA_01060 1.5e-222 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PLDGJAPA_01061 1.8e-78 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PLDGJAPA_01062 7e-231 npr 1.11.1.1 C NADH oxidase
PLDGJAPA_01063 1e-66 S pyridoxamine 5-phosphate
PLDGJAPA_01064 6.8e-170 yobV1 K WYL domain
PLDGJAPA_01065 9.4e-80 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PLDGJAPA_01066 7.1e-32
PLDGJAPA_01067 5.7e-54
PLDGJAPA_01068 1.5e-160 L An automated process has identified a potential problem with this gene model
PLDGJAPA_01069 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PLDGJAPA_01070 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PLDGJAPA_01071 1.7e-29 secG U Preprotein translocase
PLDGJAPA_01072 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PLDGJAPA_01073 1.5e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PLDGJAPA_01074 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
PLDGJAPA_01075 6.7e-223 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PLDGJAPA_01087 1.2e-94
PLDGJAPA_01088 2.3e-234 V ABC transporter transmembrane region
PLDGJAPA_01089 1.2e-84 KLT serine threonine protein kinase
PLDGJAPA_01091 5.8e-96
PLDGJAPA_01093 6.4e-62 L Transposase
PLDGJAPA_01094 5.3e-245 L COG2963 Transposase and inactivated derivatives
PLDGJAPA_01095 0.0 UW LPXTG-motif cell wall anchor domain protein
PLDGJAPA_01096 1.2e-22
PLDGJAPA_01097 6.5e-33 L PFAM IS66 Orf2 family protein
PLDGJAPA_01098 2e-14 S Transposase C of IS166 homeodomain
PLDGJAPA_01099 7.1e-127 UW LPXTG-motif cell wall anchor domain protein
PLDGJAPA_01100 3e-164 UW LPXTG-motif cell wall anchor domain protein
PLDGJAPA_01101 2.4e-39 UW LPXTG-motif cell wall anchor domain protein
PLDGJAPA_01102 2.7e-26 UW LPXTG-motif cell wall anchor domain protein
PLDGJAPA_01103 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PLDGJAPA_01104 1.4e-98 J Acetyltransferase (GNAT) domain
PLDGJAPA_01105 1.8e-110 yjbF S SNARE associated Golgi protein
PLDGJAPA_01106 6.5e-153 I alpha/beta hydrolase fold
PLDGJAPA_01107 4.2e-158 hipB K Helix-turn-helix
PLDGJAPA_01108 2.4e-92 F Nucleoside 2-deoxyribosyltransferase
PLDGJAPA_01109 3e-262 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PLDGJAPA_01110 4e-170 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PLDGJAPA_01111 7.1e-118 drgA C Nitroreductase family
PLDGJAPA_01112 7.5e-89
PLDGJAPA_01113 3e-187
PLDGJAPA_01114 2.9e-99 3.1.4.37 S AAA domain
PLDGJAPA_01115 1.2e-11
PLDGJAPA_01116 1.4e-69
PLDGJAPA_01117 6.2e-271
PLDGJAPA_01118 3.2e-83 D VirC1 protein
PLDGJAPA_01119 6.2e-15 L Belongs to the 'phage' integrase family
PLDGJAPA_01120 1.5e-109 L Belongs to the 'phage' integrase family
PLDGJAPA_01137 1.7e-34 L reverse transcriptase
PLDGJAPA_01138 5.2e-126 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PLDGJAPA_01139 1.1e-52
PLDGJAPA_01140 2e-42 S RelB antitoxin
PLDGJAPA_01141 4e-20 L PFAM transposase, IS4 family protein
PLDGJAPA_01142 6e-244 yisQ V MatE
PLDGJAPA_01143 2.7e-22 S Bacterial protein of unknown function (DUF871)
PLDGJAPA_01144 5.3e-104 S Bacterial protein of unknown function (DUF871)
PLDGJAPA_01145 2.7e-122 3.2.1.18 GH33 M Rib/alpha-like repeat
PLDGJAPA_01148 7.9e-57 ps115 K Helix-turn-helix XRE-family like proteins
PLDGJAPA_01149 5.9e-19 yjdF S Protein of unknown function (DUF2992)
PLDGJAPA_01150 2.3e-59 hxlR K Transcriptional regulator, HxlR family
PLDGJAPA_01151 3.2e-197 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PLDGJAPA_01152 2.3e-44 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PLDGJAPA_01153 1.6e-249 L Putative transposase DNA-binding domain
PLDGJAPA_01154 6.4e-116 L Resolvase, N-terminal
PLDGJAPA_01155 2.5e-43 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PLDGJAPA_01156 1e-95
PLDGJAPA_01157 7.5e-145 yfeO P Voltage gated chloride channel
PLDGJAPA_01158 2.1e-185 5.3.3.2 C FMN-dependent dehydrogenase
PLDGJAPA_01159 2.8e-52
PLDGJAPA_01160 4.7e-42
PLDGJAPA_01161 7.5e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PLDGJAPA_01162 1.1e-297 ybeC E amino acid
PLDGJAPA_01163 2.2e-156 S Sucrose-6F-phosphate phosphohydrolase
PLDGJAPA_01164 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PLDGJAPA_01165 2.5e-39 rpmE2 J Ribosomal protein L31
PLDGJAPA_01166 3.8e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PLDGJAPA_01167 2.8e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PLDGJAPA_01168 1.4e-59 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PLDGJAPA_01169 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PLDGJAPA_01170 3.4e-129 S (CBS) domain
PLDGJAPA_01171 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PLDGJAPA_01172 1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PLDGJAPA_01173 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PLDGJAPA_01174 4.6e-33 yabO J S4 domain protein
PLDGJAPA_01175 6.8e-60 divIC D Septum formation initiator
PLDGJAPA_01176 6.3e-63 yabR J S1 RNA binding domain
PLDGJAPA_01177 9.9e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PLDGJAPA_01178 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PLDGJAPA_01179 3.7e-165 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PLDGJAPA_01180 2.3e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PLDGJAPA_01181 5.8e-299 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PLDGJAPA_01182 1.8e-83 K FR47-like protein
PLDGJAPA_01184 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
PLDGJAPA_01185 1.6e-08
PLDGJAPA_01186 1.6e-08
PLDGJAPA_01188 1.3e-81 yebR 1.8.4.14 T GAF domain-containing protein
PLDGJAPA_01189 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PLDGJAPA_01190 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PLDGJAPA_01191 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PLDGJAPA_01192 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PLDGJAPA_01193 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PLDGJAPA_01194 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PLDGJAPA_01195 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PLDGJAPA_01196 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PLDGJAPA_01197 4.4e-112 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PLDGJAPA_01198 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
PLDGJAPA_01199 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PLDGJAPA_01200 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PLDGJAPA_01201 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PLDGJAPA_01202 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PLDGJAPA_01203 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PLDGJAPA_01204 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PLDGJAPA_01205 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PLDGJAPA_01206 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PLDGJAPA_01207 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PLDGJAPA_01208 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PLDGJAPA_01209 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PLDGJAPA_01210 6.8e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PLDGJAPA_01211 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PLDGJAPA_01212 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PLDGJAPA_01213 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PLDGJAPA_01214 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PLDGJAPA_01215 2.3e-24 rpmD J Ribosomal protein L30
PLDGJAPA_01216 2.6e-71 rplO J Binds to the 23S rRNA
PLDGJAPA_01217 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PLDGJAPA_01218 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PLDGJAPA_01219 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PLDGJAPA_01220 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PLDGJAPA_01221 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PLDGJAPA_01222 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PLDGJAPA_01223 2.4e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PLDGJAPA_01224 1.4e-60 rplQ J Ribosomal protein L17
PLDGJAPA_01225 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PLDGJAPA_01226 2.7e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PLDGJAPA_01227 2.6e-138 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PLDGJAPA_01228 1.7e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PLDGJAPA_01229 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PLDGJAPA_01230 1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
PLDGJAPA_01231 7.9e-163 M Belongs to the glycosyl hydrolase 28 family
PLDGJAPA_01232 2.7e-79 K Acetyltransferase (GNAT) domain
PLDGJAPA_01233 6.7e-107 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PLDGJAPA_01234 5.1e-119 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PLDGJAPA_01235 1.1e-133 S membrane transporter protein
PLDGJAPA_01236 5.8e-126 gpmB G Belongs to the phosphoglycerate mutase family
PLDGJAPA_01237 5.1e-162 czcD P cation diffusion facilitator family transporter
PLDGJAPA_01238 1.4e-23
PLDGJAPA_01239 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PLDGJAPA_01240 1.1e-183 S AAA domain
PLDGJAPA_01241 3e-267 pepC 3.4.22.40 E Peptidase C1-like family
PLDGJAPA_01242 6.4e-53
PLDGJAPA_01243 5.2e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PLDGJAPA_01244 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PLDGJAPA_01245 5.6e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PLDGJAPA_01246 2e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PLDGJAPA_01247 2.3e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PLDGJAPA_01248 6.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PLDGJAPA_01249 5.5e-95 sigH K Belongs to the sigma-70 factor family
PLDGJAPA_01250 1.7e-34
PLDGJAPA_01251 3.6e-77 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PLDGJAPA_01252 9.4e-186 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PLDGJAPA_01253 2.6e-255 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PLDGJAPA_01254 1.1e-46 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PLDGJAPA_01255 4.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PLDGJAPA_01256 1.1e-101 nusG K Participates in transcription elongation, termination and antitermination
PLDGJAPA_01257 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PLDGJAPA_01258 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PLDGJAPA_01259 9.5e-158 pstS P Phosphate
PLDGJAPA_01260 3.9e-163 pstC P probably responsible for the translocation of the substrate across the membrane
PLDGJAPA_01261 1.2e-155 pstA P Phosphate transport system permease protein PstA
PLDGJAPA_01262 6.5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PLDGJAPA_01263 7.8e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PLDGJAPA_01264 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
PLDGJAPA_01265 3.5e-85 L An automated process has identified a potential problem with this gene model
PLDGJAPA_01266 7.8e-13 GT2,GT4 M family 8
PLDGJAPA_01267 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PLDGJAPA_01268 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PLDGJAPA_01269 5.1e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PLDGJAPA_01270 3.8e-116 rsmC 2.1.1.172 J Methyltransferase
PLDGJAPA_01271 9e-26
PLDGJAPA_01272 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PLDGJAPA_01273 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PLDGJAPA_01274 1.2e-103 2.4.1.58 GT8 M family 8
PLDGJAPA_01275 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
PLDGJAPA_01276 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PLDGJAPA_01277 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PLDGJAPA_01278 1.1e-34 S Protein of unknown function (DUF2508)
PLDGJAPA_01279 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PLDGJAPA_01280 8.9e-53 yaaQ S Cyclic-di-AMP receptor
PLDGJAPA_01281 3e-156 holB 2.7.7.7 L DNA polymerase III
PLDGJAPA_01282 1.8e-59 yabA L Involved in initiation control of chromosome replication
PLDGJAPA_01283 7.9e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PLDGJAPA_01284 2.6e-140 fat 3.1.2.21 I Acyl-ACP thioesterase
PLDGJAPA_01285 2.4e-87 S ECF transporter, substrate-specific component
PLDGJAPA_01286 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PLDGJAPA_01287 1.6e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PLDGJAPA_01288 6.2e-196 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PLDGJAPA_01289 6e-126 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PLDGJAPA_01290 7.6e-164 S Oxidoreductase family, NAD-binding Rossmann fold
PLDGJAPA_01291 1.2e-113 K UTRA
PLDGJAPA_01293 6.7e-110 dnaX 2.4.99.16, 2.7.7.7 GH13 M domain protein
PLDGJAPA_01294 4.4e-83 yfdE 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PLDGJAPA_01295 1.3e-35 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PLDGJAPA_01296 6.5e-114 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PLDGJAPA_01297 1.5e-26 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PLDGJAPA_01298 2e-114 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PLDGJAPA_01299 0.0 uup S ABC transporter, ATP-binding protein
PLDGJAPA_01300 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PLDGJAPA_01301 1e-184 scrR K helix_turn _helix lactose operon repressor
PLDGJAPA_01302 3.7e-295 scrB 3.2.1.26 GH32 G invertase
PLDGJAPA_01303 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PLDGJAPA_01304 4.4e-180 M CHAP domain
PLDGJAPA_01305 1.9e-73
PLDGJAPA_01306 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PLDGJAPA_01307 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PLDGJAPA_01308 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PLDGJAPA_01309 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PLDGJAPA_01310 4.5e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PLDGJAPA_01311 6.7e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PLDGJAPA_01312 9.6e-41 yajC U Preprotein translocase
PLDGJAPA_01313 1.6e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PLDGJAPA_01314 1.6e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PLDGJAPA_01315 4.7e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PLDGJAPA_01316 4.7e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PLDGJAPA_01317 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PLDGJAPA_01318 2e-42 yrzL S Belongs to the UPF0297 family
PLDGJAPA_01319 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PLDGJAPA_01320 1.1e-50 yrzB S Belongs to the UPF0473 family
PLDGJAPA_01321 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PLDGJAPA_01322 3.5e-54 trxA O Belongs to the thioredoxin family
PLDGJAPA_01323 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PLDGJAPA_01324 1.4e-66 yslB S Protein of unknown function (DUF2507)
PLDGJAPA_01325 5.8e-133 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PLDGJAPA_01326 2.2e-108 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PLDGJAPA_01327 3.9e-140 ykuT M mechanosensitive ion channel
PLDGJAPA_01328 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PLDGJAPA_01329 5.1e-36
PLDGJAPA_01330 9.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PLDGJAPA_01331 4.9e-182 ccpA K catabolite control protein A
PLDGJAPA_01332 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PLDGJAPA_01333 4.3e-55
PLDGJAPA_01334 7.5e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PLDGJAPA_01335 1.7e-105 yutD S Protein of unknown function (DUF1027)
PLDGJAPA_01336 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PLDGJAPA_01337 3.7e-100 S Protein of unknown function (DUF1461)
PLDGJAPA_01338 2.3e-116 dedA S SNARE-like domain protein
PLDGJAPA_01339 2.3e-184 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PLDGJAPA_01340 1.8e-226 L COG3547 Transposase and inactivated derivatives
PLDGJAPA_01341 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PLDGJAPA_01342 2.1e-39 V Type I restriction modification DNA specificity domain
PLDGJAPA_01343 9.9e-172 L Belongs to the 'phage' integrase family
PLDGJAPA_01344 3.2e-86 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PLDGJAPA_01345 2.6e-53 L Transposase and inactivated derivatives
PLDGJAPA_01346 5.3e-23
PLDGJAPA_01347 1.4e-59 L PFAM IS66 Orf2 family protein
PLDGJAPA_01350 5.7e-166 psaA P Belongs to the bacterial solute-binding protein 9 family
PLDGJAPA_01353 4.6e-219 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PLDGJAPA_01354 2.1e-258 qacA EGP Major facilitator Superfamily
PLDGJAPA_01355 1.3e-79 ybbH_2 K Helix-turn-helix domain, rpiR family
PLDGJAPA_01356 1.8e-119 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PLDGJAPA_01357 3.1e-119 S Putative esterase
PLDGJAPA_01358 4.1e-214 2.7.1.208, 2.7.1.211 G phosphotransferase system
PLDGJAPA_01359 2.3e-195 S Bacterial protein of unknown function (DUF871)
PLDGJAPA_01360 1.8e-148 ybbH_2 K rpiR family
PLDGJAPA_01361 2.3e-273 cydA 1.10.3.14 C ubiquinol oxidase
PLDGJAPA_01362 3e-179 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PLDGJAPA_01363 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PLDGJAPA_01364 1.9e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PLDGJAPA_01365 5.7e-129 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PLDGJAPA_01366 6.1e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PLDGJAPA_01367 3e-162 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PLDGJAPA_01368 1.1e-231 ndh 1.6.99.3 C NADH dehydrogenase
PLDGJAPA_01369 2.1e-91 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PLDGJAPA_01370 6.3e-168 K LysR substrate binding domain
PLDGJAPA_01371 3.2e-121 3.6.1.27 I Acid phosphatase homologues
PLDGJAPA_01372 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PLDGJAPA_01373 2.6e-289 ytgP S Polysaccharide biosynthesis protein
PLDGJAPA_01374 4.9e-75 S PAS domain
PLDGJAPA_01376 1e-80 yphH S Cupin domain
PLDGJAPA_01377 1.8e-45 L Psort location Cytoplasmic, score
PLDGJAPA_01378 9.3e-124 L Bifunctional protein
PLDGJAPA_01379 9.1e-106 pncA Q Isochorismatase family
PLDGJAPA_01380 3.3e-272 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PLDGJAPA_01381 3.1e-130 3.6.1.13, 3.6.1.55 F NUDIX domain
PLDGJAPA_01382 8.2e-48 pspC KT PspC domain
PLDGJAPA_01384 1.3e-240 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PLDGJAPA_01385 7.4e-155 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PLDGJAPA_01386 2.3e-98 M ErfK YbiS YcfS YnhG
PLDGJAPA_01387 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PLDGJAPA_01388 7.9e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PLDGJAPA_01389 4.4e-81 3.6.1.55 L NUDIX domain
PLDGJAPA_01390 6.6e-77 menA 2.5.1.74 H UbiA prenyltransferase family
PLDGJAPA_01392 3.6e-45
PLDGJAPA_01393 8.7e-126 2.7.13.3 T GHKL domain
PLDGJAPA_01394 4.6e-143 K LytTr DNA-binding domain
PLDGJAPA_01395 6.3e-111
PLDGJAPA_01397 1.2e-93
PLDGJAPA_01398 2.6e-64 yniG EGP Major facilitator Superfamily
PLDGJAPA_01399 1.2e-80 racA K Domain of unknown function (DUF1836)
PLDGJAPA_01400 2.4e-150 yitS S EDD domain protein, DegV family
PLDGJAPA_01401 5.3e-50
PLDGJAPA_01402 9e-43
PLDGJAPA_01403 1.3e-39 K helix_turn_helix, arabinose operon control protein
PLDGJAPA_01404 3e-270 lacZ 3.2.1.23 G Glycosyl hydrolases family 2, sugar binding domain
PLDGJAPA_01405 2.1e-128 uhpT EGP Major Facilitator Superfamily
PLDGJAPA_01406 0.0 3.2.1.40 G Bacterial alpha-L-rhamnosidase C-terminal domain
PLDGJAPA_01407 2.4e-188 xynB 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
PLDGJAPA_01408 1.3e-114 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PLDGJAPA_01409 9.2e-246 3.2.1.21 GH3 G Fibronectin type III-like domain
PLDGJAPA_01410 6.6e-15 uidA 3.2.1.31 G Glycosyl hydrolases family 2, sugar binding domain
PLDGJAPA_01411 1.7e-19 uidA 3.2.1.31 G Belongs to the glycosyl hydrolase 2 family
PLDGJAPA_01412 4.1e-80 uidA 3.2.1.31 G Belongs to the glycosyl hydrolase 2 family
PLDGJAPA_01413 2.9e-28 uidA 3.2.1.31 G Glycosyl hydrolases family 2
PLDGJAPA_01414 7.3e-99 S Alpha beta hydrolase
PLDGJAPA_01415 1.9e-34 K DNA-binding transcription factor activity
PLDGJAPA_01416 7e-88 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLDGJAPA_01417 1.1e-80 G YdjC-like protein
PLDGJAPA_01418 3.2e-222 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PLDGJAPA_01419 2.2e-15 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PLDGJAPA_01420 3e-88 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PLDGJAPA_01421 1.3e-62 glpK_1 2.7.1.30 G FGGY family of carbohydrate kinases, C-terminal domain
PLDGJAPA_01422 8.7e-71 glpK_1 2.7.1.30 G FGGY family of carbohydrate kinases, C-terminal domain
PLDGJAPA_01423 6.5e-121 tktA 2.2.1.1 G Transketolase, pyrimidine binding domain
PLDGJAPA_01424 3.2e-86 2.7.7.7 S Domain of unknown function (DUF5060)
PLDGJAPA_01425 1.7e-119 nlhH_1 I acetylesterase activity
PLDGJAPA_01426 0.0 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
PLDGJAPA_01427 8.1e-185 K helix_turn_helix, arabinose operon control protein
PLDGJAPA_01428 1.4e-46 S Sugar efflux transporter for intercellular exchange
PLDGJAPA_01429 5.7e-138 K Helix-turn-helix domain, rpiR family
PLDGJAPA_01430 2.9e-243 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLDGJAPA_01431 7.8e-197 I transferase activity, transferring acyl groups other than amino-acyl groups
PLDGJAPA_01432 5.7e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PLDGJAPA_01434 1.6e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PLDGJAPA_01435 2.3e-110 G Phosphoglycerate mutase family
PLDGJAPA_01436 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PLDGJAPA_01437 4.2e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PLDGJAPA_01438 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PLDGJAPA_01439 7.2e-56 yheA S Belongs to the UPF0342 family
PLDGJAPA_01440 2.8e-232 yhaO L Ser Thr phosphatase family protein
PLDGJAPA_01441 0.0 L AAA domain
PLDGJAPA_01442 9.3e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PLDGJAPA_01443 4.4e-272
PLDGJAPA_01444 4.3e-69 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PLDGJAPA_01445 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PLDGJAPA_01446 1.1e-24
PLDGJAPA_01447 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
PLDGJAPA_01448 2.6e-135 ecsA V ABC transporter, ATP-binding protein
PLDGJAPA_01449 6.5e-221 ecsB U ABC transporter
PLDGJAPA_01450 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PLDGJAPA_01452 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PLDGJAPA_01453 3.4e-120 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PLDGJAPA_01454 3.9e-248 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PLDGJAPA_01455 6e-236 mepA V MATE efflux family protein
PLDGJAPA_01456 7.4e-175 S SLAP domain
PLDGJAPA_01457 2.5e-80 M Peptidase family M1 domain
PLDGJAPA_01458 1.4e-115 M Peptidase family M1 domain
PLDGJAPA_01459 4e-35 M Peptidase family M1 domain
PLDGJAPA_01460 7.9e-193 S Bacteriocin helveticin-J
PLDGJAPA_01461 8e-51 L RelB antitoxin
PLDGJAPA_01462 2.7e-136 qmcA O prohibitin homologues
PLDGJAPA_01463 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PLDGJAPA_01464 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PLDGJAPA_01465 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PLDGJAPA_01466 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PLDGJAPA_01467 6.6e-251 dnaB L Replication initiation and membrane attachment
PLDGJAPA_01468 1.3e-168 dnaI L Primosomal protein DnaI
PLDGJAPA_01469 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PLDGJAPA_01470 5e-85
PLDGJAPA_01471 5.6e-175 S Domain of unknown function (DUF389)
PLDGJAPA_01472 1.5e-61 L COG2826 Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01473 8.7e-61 L COG2826 Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01474 9.6e-41 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PLDGJAPA_01475 2.1e-50 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PLDGJAPA_01476 1.4e-37 S Aldo keto reductase
PLDGJAPA_01477 3.5e-38 hxlR K HxlR-like helix-turn-helix
PLDGJAPA_01478 4.7e-73 K LytTr DNA-binding domain
PLDGJAPA_01479 1.6e-68 S Protein of unknown function (DUF3021)
PLDGJAPA_01480 3.3e-140 V ABC transporter
PLDGJAPA_01481 7.9e-116 S domain protein
PLDGJAPA_01482 6.4e-80 yyaR K Acetyltransferase (GNAT) domain
PLDGJAPA_01483 2.2e-73 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PLDGJAPA_01484 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PLDGJAPA_01485 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PLDGJAPA_01486 3.6e-153 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PLDGJAPA_01487 2.9e-85 yqeG S HAD phosphatase, family IIIA
PLDGJAPA_01488 1.5e-200 yqeH S Ribosome biogenesis GTPase YqeH
PLDGJAPA_01489 2.5e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PLDGJAPA_01490 1.9e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PLDGJAPA_01491 1.5e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PLDGJAPA_01492 5.6e-206 ylbM S Belongs to the UPF0348 family
PLDGJAPA_01493 2.3e-96 yceD S Uncharacterized ACR, COG1399
PLDGJAPA_01494 2.7e-126 K response regulator
PLDGJAPA_01495 8.2e-277 arlS 2.7.13.3 T Histidine kinase
PLDGJAPA_01496 6.3e-89 S CAAX protease self-immunity
PLDGJAPA_01497 7.2e-225 S SLAP domain
PLDGJAPA_01498 1.9e-86 S Aminoacyl-tRNA editing domain
PLDGJAPA_01499 3.8e-163 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PLDGJAPA_01500 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PLDGJAPA_01501 2.2e-137 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PLDGJAPA_01502 1.4e-62 yodB K Transcriptional regulator, HxlR family
PLDGJAPA_01504 4.3e-110 papP P ABC transporter, permease protein
PLDGJAPA_01505 1.1e-116 P ABC transporter permease
PLDGJAPA_01506 9.7e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PLDGJAPA_01507 1.4e-161 cjaA ET ABC transporter substrate-binding protein
PLDGJAPA_01508 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PLDGJAPA_01509 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PLDGJAPA_01510 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PLDGJAPA_01511 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PLDGJAPA_01512 1.9e-158 metQ1 P Belongs to the nlpA lipoprotein family
PLDGJAPA_01513 1.9e-25
PLDGJAPA_01514 0.0 mco Q Multicopper oxidase
PLDGJAPA_01515 4.2e-147 S Sucrose-6F-phosphate phosphohydrolase
PLDGJAPA_01516 0.0 oppA E ABC transporter
PLDGJAPA_01517 8.4e-229 Q Imidazolonepropionase and related amidohydrolases
PLDGJAPA_01518 2.7e-241 3.5.1.47 S Peptidase dimerisation domain
PLDGJAPA_01519 6.7e-137 S Protein of unknown function (DUF3100)
PLDGJAPA_01520 9.7e-83 S An automated process has identified a potential problem with this gene model
PLDGJAPA_01521 1e-156 L Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01522 1.7e-164 L Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01525 3.7e-81 kup P Transport of potassium into the cell
PLDGJAPA_01528 1.6e-39
PLDGJAPA_01529 2.4e-63
PLDGJAPA_01530 1.9e-30
PLDGJAPA_01531 5.6e-144 K LytTr DNA-binding domain
PLDGJAPA_01532 7.5e-186 2.7.13.3 T GHKL domain
PLDGJAPA_01534 1.1e-209 S CAAX protease self-immunity
PLDGJAPA_01536 3.5e-219 S CAAX protease self-immunity
PLDGJAPA_01538 6.2e-67
PLDGJAPA_01539 6.4e-11
PLDGJAPA_01540 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PLDGJAPA_01541 1.6e-271 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PLDGJAPA_01542 1e-24
PLDGJAPA_01543 1.2e-25
PLDGJAPA_01544 2.5e-33
PLDGJAPA_01545 5.3e-53 S Enterocin A Immunity
PLDGJAPA_01546 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PLDGJAPA_01547 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PLDGJAPA_01548 4.6e-208 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PLDGJAPA_01549 9.6e-121 K response regulator
PLDGJAPA_01551 0.0 V ABC transporter
PLDGJAPA_01552 1.9e-75 V ABC transporter, ATP-binding protein
PLDGJAPA_01553 5.5e-218 V ABC transporter, ATP-binding protein
PLDGJAPA_01554 3.2e-136 XK27_01040 S Protein of unknown function (DUF1129)
PLDGJAPA_01555 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PLDGJAPA_01556 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
PLDGJAPA_01557 6.5e-154 spo0J K Belongs to the ParB family
PLDGJAPA_01558 3.7e-137 soj D Sporulation initiation inhibitor
PLDGJAPA_01559 1.3e-148 noc K Belongs to the ParB family
PLDGJAPA_01560 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PLDGJAPA_01561 3e-53 cvpA S Colicin V production protein
PLDGJAPA_01562 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PLDGJAPA_01563 1.3e-148 3.1.3.48 T Tyrosine phosphatase family
PLDGJAPA_01564 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
PLDGJAPA_01565 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PLDGJAPA_01566 1.1e-110 K WHG domain
PLDGJAPA_01567 5.2e-37
PLDGJAPA_01568 1.3e-273 pipD E Dipeptidase
PLDGJAPA_01569 5.2e-156 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PLDGJAPA_01570 2e-155 metC1 4.4.1.8 E cystathionine
PLDGJAPA_01571 4.4e-99 metQ1 P Belongs to the nlpA lipoprotein family
PLDGJAPA_01572 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PLDGJAPA_01573 2.7e-170 hrtB V ABC transporter permease
PLDGJAPA_01574 3.1e-95 ygfC K Bacterial regulatory proteins, tetR family
PLDGJAPA_01575 7.1e-112 G phosphoglycerate mutase
PLDGJAPA_01576 4.9e-142 aroD S Alpha/beta hydrolase family
PLDGJAPA_01577 9.9e-143 S Belongs to the UPF0246 family
PLDGJAPA_01578 9e-121
PLDGJAPA_01579 8.7e-158 2.7.7.12 C Domain of unknown function (DUF4931)
PLDGJAPA_01580 2.6e-190 S Putative peptidoglycan binding domain
PLDGJAPA_01581 4e-16
PLDGJAPA_01582 7.9e-92 liaI S membrane
PLDGJAPA_01583 2.5e-69 XK27_02470 K LytTr DNA-binding domain
PLDGJAPA_01584 4.1e-249 dtpT U amino acid peptide transporter
PLDGJAPA_01585 0.0 pepN 3.4.11.2 E aminopeptidase
PLDGJAPA_01586 2.8e-47 lysM M LysM domain
PLDGJAPA_01587 6.3e-174
PLDGJAPA_01588 5.6e-212 mdtG EGP Major facilitator Superfamily
PLDGJAPA_01589 1.9e-89 ymdB S Macro domain protein
PLDGJAPA_01592 3.3e-147 malG P ABC transporter permease
PLDGJAPA_01593 3.3e-250 malF P Binding-protein-dependent transport system inner membrane component
PLDGJAPA_01594 1.7e-213 malE G Bacterial extracellular solute-binding protein
PLDGJAPA_01595 9.5e-211 msmX P Belongs to the ABC transporter superfamily
PLDGJAPA_01596 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PLDGJAPA_01597 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PLDGJAPA_01598 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PLDGJAPA_01599 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PLDGJAPA_01600 9.1e-77 S PAS domain
PLDGJAPA_01601 8.2e-205 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PLDGJAPA_01602 8.2e-179 yvdE K helix_turn _helix lactose operon repressor
PLDGJAPA_01603 6.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
PLDGJAPA_01604 3.5e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PLDGJAPA_01605 3.6e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PLDGJAPA_01606 1.3e-80
PLDGJAPA_01607 3.3e-20
PLDGJAPA_01608 1.8e-145 K Helix-turn-helix XRE-family like proteins
PLDGJAPA_01609 5e-46 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
PLDGJAPA_01610 6.5e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PLDGJAPA_01611 1.5e-68 L RelB antitoxin
PLDGJAPA_01613 1.1e-132 cobQ S glutamine amidotransferase
PLDGJAPA_01614 4.8e-82 M NlpC/P60 family
PLDGJAPA_01617 3.9e-36
PLDGJAPA_01618 4.3e-164 EG EamA-like transporter family
PLDGJAPA_01619 1.6e-166 EG EamA-like transporter family
PLDGJAPA_01620 2.8e-117 yicL EG EamA-like transporter family
PLDGJAPA_01621 2.5e-107
PLDGJAPA_01622 4.1e-110
PLDGJAPA_01623 1.7e-185 XK27_05540 S DUF218 domain
PLDGJAPA_01624 4.6e-263 yheS_2 S ATPases associated with a variety of cellular activities
PLDGJAPA_01625 1.6e-88
PLDGJAPA_01626 3.9e-57
PLDGJAPA_01627 2.4e-29 S Protein conserved in bacteria
PLDGJAPA_01628 2.5e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PLDGJAPA_01629 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PLDGJAPA_01630 7e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PLDGJAPA_01633 1.7e-204 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PLDGJAPA_01634 6.5e-190 asnA 6.3.1.1 F aspartate--ammonia ligase
PLDGJAPA_01635 1.6e-231 steT_1 E amino acid
PLDGJAPA_01636 3.7e-139 puuD S peptidase C26
PLDGJAPA_01638 1.1e-121 V HNH endonuclease
PLDGJAPA_01639 2.5e-26 V HNH endonuclease
PLDGJAPA_01640 4.9e-135 S PFAM Archaeal ATPase
PLDGJAPA_01641 7e-248 yifK E Amino acid permease
PLDGJAPA_01642 3.7e-233 cycA E Amino acid permease
PLDGJAPA_01643 1.7e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PLDGJAPA_01644 0.0 clpE O AAA domain (Cdc48 subfamily)
PLDGJAPA_01645 1.2e-168 S Alpha/beta hydrolase of unknown function (DUF915)
PLDGJAPA_01646 7.4e-239 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLDGJAPA_01647 9.9e-115 XK27_06785 V ABC transporter, ATP-binding protein
PLDGJAPA_01648 7.2e-289 XK27_06780 V ABC transporter permease
PLDGJAPA_01649 1.2e-169 XK27_06780 V ABC transporter permease
PLDGJAPA_01650 1.9e-36
PLDGJAPA_01651 7.9e-291 ytgP S Polysaccharide biosynthesis protein
PLDGJAPA_01652 2.7e-137 lysA2 M Glycosyl hydrolases family 25
PLDGJAPA_01653 7.9e-134 S Protein of unknown function (DUF975)
PLDGJAPA_01654 2.2e-176 pbpX2 V Beta-lactamase
PLDGJAPA_01655 1.2e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PLDGJAPA_01656 4.3e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PLDGJAPA_01657 8.3e-240 dltB M MBOAT, membrane-bound O-acyltransferase family
PLDGJAPA_01658 1.7e-290 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PLDGJAPA_01659 5.2e-19 S D-Ala-teichoic acid biosynthesis protein
PLDGJAPA_01660 4.7e-48
PLDGJAPA_01661 3.4e-216 ywhK S Membrane
PLDGJAPA_01662 3.9e-81 ykuL S (CBS) domain
PLDGJAPA_01663 0.0 cadA P P-type ATPase
PLDGJAPA_01664 5.7e-206 napA P Sodium/hydrogen exchanger family
PLDGJAPA_01665 1.6e-280 V ABC transporter transmembrane region
PLDGJAPA_01666 1e-156 mutR K Helix-turn-helix XRE-family like proteins
PLDGJAPA_01667 2e-53
PLDGJAPA_01668 2.4e-121 S CAAX protease self-immunity
PLDGJAPA_01669 5.2e-193 S DUF218 domain
PLDGJAPA_01670 0.0 macB_3 V ABC transporter, ATP-binding protein
PLDGJAPA_01671 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PLDGJAPA_01672 2.8e-100 S ECF transporter, substrate-specific component
PLDGJAPA_01673 4.7e-202 tcsA S ABC transporter substrate-binding protein PnrA-like
PLDGJAPA_01674 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
PLDGJAPA_01675 2.3e-284 xylG 3.6.3.17 S ABC transporter
PLDGJAPA_01676 2.5e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
PLDGJAPA_01677 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
PLDGJAPA_01678 4.3e-160 yeaE S Aldo/keto reductase family
PLDGJAPA_01679 4.7e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PLDGJAPA_01680 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PLDGJAPA_01681 3.6e-128 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PLDGJAPA_01682 7.4e-69
PLDGJAPA_01683 3.7e-140 cof S haloacid dehalogenase-like hydrolase
PLDGJAPA_01684 2.2e-230 pbuG S permease
PLDGJAPA_01685 2.8e-84 K Helix-turn-helix XRE-family like proteins
PLDGJAPA_01686 4.5e-77 V ATPases associated with a variety of cellular activities
PLDGJAPA_01687 1.8e-148 S ABC-2 family transporter protein
PLDGJAPA_01688 1.5e-45 L An automated process has identified a potential problem with this gene model
PLDGJAPA_01689 6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01690 1.5e-128 3.1.21.3 V Type I restriction modification DNA specificity domain
PLDGJAPA_01691 0.0 hsdR 3.1.21.3 V EcoEI R protein C-terminal
PLDGJAPA_01692 5e-117 L restriction endonuclease
PLDGJAPA_01693 3.6e-142 mrr L restriction endonuclease
PLDGJAPA_01694 5.9e-62
PLDGJAPA_01695 6.1e-38 K LysR substrate binding domain
PLDGJAPA_01696 8e-284 1.3.5.4 C FMN_bind
PLDGJAPA_01698 1.8e-63
PLDGJAPA_01699 1.2e-19 S Sel1-like repeats.
PLDGJAPA_01700 2.1e-76 S HIRAN
PLDGJAPA_01701 6.4e-31
PLDGJAPA_01702 4.7e-180
PLDGJAPA_01703 5.6e-98 3.1.4.37 S AAA domain
PLDGJAPA_01705 1.5e-303 oppA E ABC transporter substrate-binding protein
PLDGJAPA_01706 1.4e-287 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PLDGJAPA_01707 3.1e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PLDGJAPA_01708 4e-167 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PLDGJAPA_01709 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PLDGJAPA_01710 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PLDGJAPA_01711 0.0 FbpA K Fibronectin-binding protein
PLDGJAPA_01712 1.1e-66
PLDGJAPA_01713 2.4e-159 degV S EDD domain protein, DegV family
PLDGJAPA_01714 3.8e-305 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PLDGJAPA_01715 1.8e-203 xerS L Belongs to the 'phage' integrase family
PLDGJAPA_01716 4.1e-67
PLDGJAPA_01717 1.8e-110 XK27_00160 S Domain of unknown function (DUF5052)
PLDGJAPA_01718 5.2e-212 M Glycosyl hydrolases family 25
PLDGJAPA_01719 2e-39 S Transglycosylase associated protein
PLDGJAPA_01720 2.7e-123 yoaK S Protein of unknown function (DUF1275)
PLDGJAPA_01721 4e-57 K Helix-turn-helix domain
PLDGJAPA_01722 1.1e-112 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PLDGJAPA_01723 7.3e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
PLDGJAPA_01724 2.1e-182 K Transcriptional regulator
PLDGJAPA_01725 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PLDGJAPA_01726 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PLDGJAPA_01727 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PLDGJAPA_01728 0.0 snf 2.7.11.1 KL domain protein
PLDGJAPA_01729 8.5e-27
PLDGJAPA_01730 8.6e-26
PLDGJAPA_01732 8.6e-104 pncA Q Isochorismatase family
PLDGJAPA_01733 3.4e-119
PLDGJAPA_01736 3.6e-63
PLDGJAPA_01737 1.4e-34
PLDGJAPA_01738 1.2e-114 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
PLDGJAPA_01739 3.4e-79
PLDGJAPA_01740 1e-242 cpdA S Calcineurin-like phosphoesterase
PLDGJAPA_01741 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PLDGJAPA_01742 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PLDGJAPA_01743 1e-107 ypsA S Belongs to the UPF0398 family
PLDGJAPA_01744 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PLDGJAPA_01745 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PLDGJAPA_01746 2.7e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PLDGJAPA_01747 1.3e-114 dnaD L DnaD domain protein
PLDGJAPA_01748 1.5e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PLDGJAPA_01749 8.3e-90 ypmB S Protein conserved in bacteria
PLDGJAPA_01750 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PLDGJAPA_01751 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PLDGJAPA_01752 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PLDGJAPA_01753 2.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PLDGJAPA_01754 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PLDGJAPA_01755 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PLDGJAPA_01756 8.2e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PLDGJAPA_01757 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
PLDGJAPA_01758 6.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PLDGJAPA_01759 1.1e-167
PLDGJAPA_01760 1.8e-144
PLDGJAPA_01761 8.8e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PLDGJAPA_01762 3.8e-27
PLDGJAPA_01763 4.3e-39 ybjQ S Belongs to the UPF0145 family
PLDGJAPA_01764 1.6e-109
PLDGJAPA_01765 2.3e-105
PLDGJAPA_01766 6.2e-122
PLDGJAPA_01767 6.2e-123 skfE V ATPases associated with a variety of cellular activities
PLDGJAPA_01768 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
PLDGJAPA_01769 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PLDGJAPA_01770 5e-153 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PLDGJAPA_01771 2.4e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
PLDGJAPA_01772 4.8e-81 mutT 3.6.1.55 F NUDIX domain
PLDGJAPA_01773 2.3e-127 S Peptidase family M23
PLDGJAPA_01774 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PLDGJAPA_01775 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PLDGJAPA_01776 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PLDGJAPA_01777 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PLDGJAPA_01778 1.1e-136 recO L Involved in DNA repair and RecF pathway recombination
PLDGJAPA_01779 8.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PLDGJAPA_01780 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PLDGJAPA_01781 3.3e-175 phoH T phosphate starvation-inducible protein PhoH
PLDGJAPA_01782 1.6e-71 yqeY S YqeY-like protein
PLDGJAPA_01783 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PLDGJAPA_01784 1.4e-39 L Transposase and inactivated derivatives, IS30 family
PLDGJAPA_01785 1.2e-70 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PLDGJAPA_01786 4.3e-225 N Uncharacterized conserved protein (DUF2075)
PLDGJAPA_01787 6.2e-205 pbpX1 V Beta-lactamase
PLDGJAPA_01788 0.0 L Helicase C-terminal domain protein
PLDGJAPA_01789 1.3e-273 E amino acid
PLDGJAPA_01790 2.5e-160 xth 3.1.11.2 L exodeoxyribonuclease III
PLDGJAPA_01792 3.8e-190 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PLDGJAPA_01793 7.4e-152 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
PLDGJAPA_01794 0.0 tetP J elongation factor G
PLDGJAPA_01795 1.4e-158 yvgN C Aldo keto reductase
PLDGJAPA_01796 2.2e-154 P CorA-like Mg2+ transporter protein
PLDGJAPA_01797 3.5e-134 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PLDGJAPA_01798 3.4e-175 ABC-SBP S ABC transporter
PLDGJAPA_01799 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PLDGJAPA_01800 8.1e-137 XK27_08845 S ABC transporter, ATP-binding protein
PLDGJAPA_01801 2.3e-248 G Major Facilitator
PLDGJAPA_01802 4.1e-18
PLDGJAPA_01803 8.9e-104 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PLDGJAPA_01804 1.1e-176 K AI-2E family transporter
PLDGJAPA_01805 0.0 oppA E ABC transporter substrate-binding protein
PLDGJAPA_01806 1.4e-139 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PLDGJAPA_01807 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PLDGJAPA_01808 4.2e-38 M domain protein
PLDGJAPA_01809 1e-19 L COG3385 FOG Transposase and inactivated derivatives
PLDGJAPA_01810 8.7e-14 L PFAM transposase, IS4 family protein
PLDGJAPA_01811 3.3e-79 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
PLDGJAPA_01812 2.2e-145 S Putative ABC-transporter type IV
PLDGJAPA_01813 6.5e-07 S LPXTG cell wall anchor motif
PLDGJAPA_01814 2.7e-29
PLDGJAPA_01816 9.8e-121 yhiD S MgtC family
PLDGJAPA_01817 5.9e-230 I Protein of unknown function (DUF2974)
PLDGJAPA_01818 3.5e-15 S Transglycosylase associated protein
PLDGJAPA_01820 9.6e-166 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PLDGJAPA_01821 8.4e-136 V ABC transporter transmembrane region
PLDGJAPA_01822 3.6e-171 degV S DegV family
PLDGJAPA_01823 2.7e-166 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PLDGJAPA_01824 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PLDGJAPA_01825 9.7e-69 rplI J Binds to the 23S rRNA
PLDGJAPA_01826 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PLDGJAPA_01827 5.9e-202 S SLAP domain
PLDGJAPA_01828 1.3e-170 S Bacteriocin helveticin-J
PLDGJAPA_01829 1.4e-91 E Zn peptidase
PLDGJAPA_01830 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PLDGJAPA_01831 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PLDGJAPA_01832 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PLDGJAPA_01833 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PLDGJAPA_01834 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PLDGJAPA_01835 6.2e-210 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PLDGJAPA_01836 2.6e-35 yaaA S S4 domain protein YaaA
PLDGJAPA_01837 1.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PLDGJAPA_01838 3.6e-244 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PLDGJAPA_01839 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PLDGJAPA_01840 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PLDGJAPA_01841 2.5e-145 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PLDGJAPA_01842 4e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PLDGJAPA_01843 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PLDGJAPA_01844 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PLDGJAPA_01845 1.4e-48 K UTRA
PLDGJAPA_01847 6.4e-61 L An automated process has identified a potential problem with this gene model
PLDGJAPA_01848 6.7e-32 G PTS system fructose IIA component
PLDGJAPA_01849 1.4e-54 2.7.1.191 G PTS system sorbose subfamily IIB component
PLDGJAPA_01850 6.2e-79 G PTS system sorbose-specific iic component
PLDGJAPA_01851 7.2e-110 G PTS system mannose/fructose/sorbose family IID component
PLDGJAPA_01852 3.5e-140 glmS2 G Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PLDGJAPA_01853 4.2e-56 M SIS domain
PLDGJAPA_01854 1.3e-39 pgm3 G Phosphoglycerate mutase family
PLDGJAPA_01855 2e-13
PLDGJAPA_01856 2.4e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PLDGJAPA_01857 1.4e-289 clcA P chloride
PLDGJAPA_01858 5.7e-208
PLDGJAPA_01859 1.5e-18
PLDGJAPA_01860 1.9e-245 EGP Sugar (and other) transporter
PLDGJAPA_01861 1.2e-105
PLDGJAPA_01862 2.4e-113 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PLDGJAPA_01863 0.0 copA 3.6.3.54 P P-type ATPase
PLDGJAPA_01864 1.2e-48 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PLDGJAPA_01865 4.1e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PLDGJAPA_01866 5.1e-75 atkY K Penicillinase repressor
PLDGJAPA_01867 1.3e-27
PLDGJAPA_01868 4.2e-226 pbuG S permease
PLDGJAPA_01869 9.7e-146 S haloacid dehalogenase-like hydrolase
PLDGJAPA_01870 2.5e-225 S cog cog1373
PLDGJAPA_01871 1.6e-61 K Transcriptional regulator
PLDGJAPA_01872 2.1e-72 K Transcriptional regulator
PLDGJAPA_01873 2.3e-41 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PLDGJAPA_01874 2e-47 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PLDGJAPA_01875 4.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
PLDGJAPA_01876 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
PLDGJAPA_01877 8.8e-232 pbuG S permease
PLDGJAPA_01878 2.5e-127 K helix_turn_helix, mercury resistance
PLDGJAPA_01879 9.5e-36 S CAAX protease self-immunity
PLDGJAPA_01880 1.1e-164 S Protein of unknown function (DUF2974)
PLDGJAPA_01881 4.7e-109 glnP P ABC transporter permease
PLDGJAPA_01882 9.7e-91 gluC P ABC transporter permease
PLDGJAPA_01883 1.2e-149 glnH ET ABC transporter substrate-binding protein
PLDGJAPA_01884 9.7e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PLDGJAPA_01885 3.6e-114 udk 2.7.1.48 F Zeta toxin
PLDGJAPA_01886 1.3e-252 G MFS/sugar transport protein
PLDGJAPA_01887 3.8e-102 S ABC-type cobalt transport system, permease component
PLDGJAPA_01888 0.0 V ABC transporter transmembrane region
PLDGJAPA_01889 8.2e-310 XK27_09600 V ABC transporter, ATP-binding protein
PLDGJAPA_01890 1.4e-80 K Transcriptional regulator, MarR family
PLDGJAPA_01891 1.4e-147 glnH ET ABC transporter
PLDGJAPA_01892 1.4e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
PLDGJAPA_01893 6.6e-243 steT E amino acid
PLDGJAPA_01894 5.7e-239 steT E amino acid
PLDGJAPA_01895 5.2e-150
PLDGJAPA_01896 4.4e-169 S Aldo keto reductase
PLDGJAPA_01897 1.9e-308 ybiT S ABC transporter, ATP-binding protein
PLDGJAPA_01898 6e-210 pepA E M42 glutamyl aminopeptidase
PLDGJAPA_01899 9.1e-104
PLDGJAPA_01900 2.4e-136
PLDGJAPA_01901 1.1e-212 mdtG EGP Major facilitator Superfamily
PLDGJAPA_01902 1.1e-259 emrY EGP Major facilitator Superfamily
PLDGJAPA_01903 1.1e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PLDGJAPA_01904 2.9e-238 pyrP F Permease
PLDGJAPA_01905 7.2e-294 K Putative DNA-binding domain
PLDGJAPA_01906 9.3e-35
PLDGJAPA_01907 9.2e-158 S reductase
PLDGJAPA_01908 3.1e-45
PLDGJAPA_01909 5.9e-206 V ABC transporter transmembrane region
PLDGJAPA_01910 2.2e-95 K Helix-turn-helix XRE-family like proteins
PLDGJAPA_01911 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
PLDGJAPA_01912 0.0 4.2.1.53 S Myosin-crossreactive antigen
PLDGJAPA_01913 2e-91 yxdD K Bacterial regulatory proteins, tetR family
PLDGJAPA_01914 1.9e-259 emrY EGP Major facilitator Superfamily
PLDGJAPA_01919 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
PLDGJAPA_01920 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PLDGJAPA_01921 1.2e-199 pbpX V Beta-lactamase
PLDGJAPA_01922 9.2e-232 nhaC C Na H antiporter NhaC
PLDGJAPA_01923 1.9e-22 I transferase activity, transferring acyl groups other than amino-acyl groups
PLDGJAPA_01924 3.5e-73 VPA0052 I transferase activity, transferring acyl groups other than amino-acyl groups
PLDGJAPA_01925 1.2e-50
PLDGJAPA_01926 1.2e-105 ybhL S Belongs to the BI1 family
PLDGJAPA_01927 2.9e-66 K transcriptional regulator
PLDGJAPA_01928 8e-17
PLDGJAPA_01929 7.2e-172 yegS 2.7.1.107 G Lipid kinase
PLDGJAPA_01930 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PLDGJAPA_01931 2.4e-259 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PLDGJAPA_01932 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PLDGJAPA_01933 5.4e-201 camS S sex pheromone
PLDGJAPA_01934 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PLDGJAPA_01935 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PLDGJAPA_01936 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PLDGJAPA_01938 6.9e-83 ydcK S Belongs to the SprT family
PLDGJAPA_01939 3.5e-134 M Glycosyltransferase sugar-binding region containing DXD motif
PLDGJAPA_01940 4.9e-260 epsU S Polysaccharide biosynthesis protein
PLDGJAPA_01941 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PLDGJAPA_01942 0.0 pacL 3.6.3.8 P P-type ATPase
PLDGJAPA_01943 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PLDGJAPA_01944 7e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PLDGJAPA_01945 1.9e-203 csaB M Glycosyl transferases group 1
PLDGJAPA_01946 7.3e-135 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PLDGJAPA_01947 2.5e-70 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PLDGJAPA_01948 2e-70 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PLDGJAPA_01949 3.6e-188 arsB 1.20.4.1 P Sodium Bile acid symporter family
PLDGJAPA_01950 9.3e-55 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
PLDGJAPA_01951 1.6e-123 gntR1 K UTRA
PLDGJAPA_01952 1.1e-179
PLDGJAPA_01953 1.9e-300 oppA2 E ABC transporter, substratebinding protein
PLDGJAPA_01954 1.6e-221 sip L Belongs to the 'phage' integrase family
PLDGJAPA_01955 1.3e-32 K Transcriptional
PLDGJAPA_01956 1.2e-13 S Helix-turn-helix domain
PLDGJAPA_01957 2.2e-53
PLDGJAPA_01958 2.9e-21
PLDGJAPA_01959 1.7e-48
PLDGJAPA_01960 6.2e-42 S Bifunctional DNA primase/polymerase, N-terminal
PLDGJAPA_01961 4.2e-196 S DNA primase
PLDGJAPA_01964 6e-61
PLDGJAPA_01967 3e-243 npr 1.11.1.1 C NADH oxidase
PLDGJAPA_01968 7.7e-12
PLDGJAPA_01969 1.3e-22 3.6.4.12 S transposase or invertase
PLDGJAPA_01970 3.3e-227 slpX S SLAP domain
PLDGJAPA_01971 4.4e-144 K SIS domain
PLDGJAPA_01972 2.4e-119 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PLDGJAPA_01973 7.2e-186 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PLDGJAPA_01974 1.3e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PLDGJAPA_01975 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PLDGJAPA_01976 1.2e-118 sip L Belongs to the 'phage' integrase family
PLDGJAPA_01977 7.7e-17 K transcriptional
PLDGJAPA_01978 3.7e-26
PLDGJAPA_01979 8e-30
PLDGJAPA_01982 9.3e-34
PLDGJAPA_01983 3.6e-52 L Replication initiation factor
PLDGJAPA_01984 1.2e-49 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PLDGJAPA_01987 3.3e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PLDGJAPA_01988 3.9e-07 K Helix-turn-helix
PLDGJAPA_01989 1.5e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PLDGJAPA_01990 1.3e-227 pbuX F xanthine permease
PLDGJAPA_01991 3.5e-154 msmR K AraC-like ligand binding domain
PLDGJAPA_01992 4.4e-285 pipD E Dipeptidase
PLDGJAPA_01993 2.7e-75 K acetyltransferase
PLDGJAPA_01994 9.6e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PLDGJAPA_01995 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PLDGJAPA_01996 1.7e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PLDGJAPA_01997 5.9e-68 S Domain of unknown function (DUF1934)
PLDGJAPA_01998 1.9e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PLDGJAPA_01999 1.9e-43
PLDGJAPA_02000 1.3e-168 2.7.1.2 GK ROK family
PLDGJAPA_02001 1e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PLDGJAPA_02002 0.0 S SLAP domain
PLDGJAPA_02003 1.2e-79
PLDGJAPA_02004 2.6e-173 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PLDGJAPA_02005 1e-148 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PLDGJAPA_02006 1.2e-39 veg S Biofilm formation stimulator VEG
PLDGJAPA_02007 2.3e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PLDGJAPA_02008 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PLDGJAPA_02009 2.8e-145 tatD L hydrolase, TatD family
PLDGJAPA_02010 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PLDGJAPA_02011 1.7e-160 V ABC-type multidrug transport system, ATPase and permease components
PLDGJAPA_02013 2.9e-101 V ABC-type multidrug transport system, ATPase and permease components
PLDGJAPA_02016 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PLDGJAPA_02017 2.9e-102 S TPM domain
PLDGJAPA_02018 5.7e-88 comEB 3.5.4.12 F MafB19-like deaminase
PLDGJAPA_02019 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PLDGJAPA_02020 7.8e-111 E Belongs to the SOS response-associated peptidase family
PLDGJAPA_02022 1.2e-112
PLDGJAPA_02023 2.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PLDGJAPA_02024 9.6e-71 hsp O Belongs to the small heat shock protein (HSP20) family
PLDGJAPA_02025 1.1e-255 pepC 3.4.22.40 E aminopeptidase
PLDGJAPA_02026 1.9e-175 oppF P Belongs to the ABC transporter superfamily
PLDGJAPA_02027 4.2e-200 oppD P Belongs to the ABC transporter superfamily
PLDGJAPA_02028 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PLDGJAPA_02029 1.4e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PLDGJAPA_02030 8.3e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PLDGJAPA_02031 1.3e-309 oppA E ABC transporter, substratebinding protein
PLDGJAPA_02032 1.7e-301 oppA E ABC transporter, substratebinding protein
PLDGJAPA_02033 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PLDGJAPA_02034 1.4e-258 pepC 3.4.22.40 E aminopeptidase
PLDGJAPA_02036 3.1e-54
PLDGJAPA_02037 1.6e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PLDGJAPA_02038 0.0 XK27_08315 M Sulfatase
PLDGJAPA_02039 5.6e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PLDGJAPA_02040 1.8e-201 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PLDGJAPA_02041 1.4e-98 G Aldose 1-epimerase
PLDGJAPA_02042 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PLDGJAPA_02043 1e-115
PLDGJAPA_02044 4.1e-131
PLDGJAPA_02045 2.1e-161 S Oxidoreductase family, NAD-binding Rossmann fold
PLDGJAPA_02046 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PLDGJAPA_02047 0.0 yjbQ P TrkA C-terminal domain protein
PLDGJAPA_02048 1.5e-192 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PLDGJAPA_02049 1.1e-212 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PLDGJAPA_02050 7.2e-130
PLDGJAPA_02053 6.4e-101 xerC L Phage integrase, N-terminal SAM-like domain
PLDGJAPA_02054 2.4e-12 lprD V PFAM secretion protein HlyD family protein
PLDGJAPA_02055 6.9e-38
PLDGJAPA_02057 8.8e-116 2.7.1.202 GKT Mga helix-turn-helix domain
PLDGJAPA_02058 6.8e-241 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PLDGJAPA_02059 2.6e-26 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PLDGJAPA_02060 2e-129 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PLDGJAPA_02061 1.3e-32 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PLDGJAPA_02062 2.2e-34 L Transposase
PLDGJAPA_02063 9.9e-174 L Transposase
PLDGJAPA_02064 1e-101 EGP Major facilitator Superfamily
PLDGJAPA_02065 3.2e-52 L COG2826 Transposase and inactivated derivatives, IS30 family
PLDGJAPA_02066 3e-44 L transposase activity
PLDGJAPA_02067 8.5e-100 cadD P Cadmium resistance transporter
PLDGJAPA_02068 7.5e-112 S SLAP domain
PLDGJAPA_02069 9.8e-21 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PLDGJAPA_02070 2.6e-192 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PLDGJAPA_02071 7.8e-73
PLDGJAPA_02073 2.7e-77 K DNA-templated transcription, initiation
PLDGJAPA_02074 1.1e-25
PLDGJAPA_02075 2.3e-52 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PLDGJAPA_02076 7e-105 S SLAP domain
PLDGJAPA_02077 1.1e-40 S Protein of unknown function (DUF2922)
PLDGJAPA_02078 5.5e-30
PLDGJAPA_02080 3e-10 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PLDGJAPA_02081 1e-44 S PFAM Archaeal ATPase
PLDGJAPA_02082 3e-75
PLDGJAPA_02083 1.4e-39 L Transposase and inactivated derivatives, IS30 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)