ORF_ID e_value Gene_name EC_number CAZy COGs Description
PKJOBBIB_00001 1.2e-129 XK27_08435 K UTRA
PKJOBBIB_00002 1.6e-219 agaS G SIS domain
PKJOBBIB_00003 9.9e-227 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PKJOBBIB_00004 0.0 bgaC 3.2.1.23 G Glycosyl hydrolases family 35
PKJOBBIB_00005 3.6e-82 manX_1 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_00006 2.1e-21 XK27_08455 G PTS system sorbose-specific iic component
PKJOBBIB_00007 1.2e-129 XK27_08455 G PTS system sorbose-specific iic component
PKJOBBIB_00008 7.9e-146 manZ_1 G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_00009 9.2e-65 XK27_08465 2.7.1.191 G PTS system fructose IIA component
PKJOBBIB_00011 5.4e-178 S Uncharacterized protein conserved in bacteria (DUF2325)
PKJOBBIB_00012 1.8e-191 4.4.1.8 E Aminotransferase, class I
PKJOBBIB_00013 2.9e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PKJOBBIB_00014 2.3e-251 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PKJOBBIB_00015 2.3e-59 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PKJOBBIB_00016 3e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PKJOBBIB_00017 3.6e-188 ypdE E M42 glutamyl aminopeptidase
PKJOBBIB_00018 0.0 licR 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PKJOBBIB_00019 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00020 9.5e-244 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PKJOBBIB_00021 1.5e-139 E ABC transporter, substratebinding protein
PKJOBBIB_00022 2.3e-136 E ABC transporter, substratebinding protein
PKJOBBIB_00023 4.9e-119 S Acetyltransferase (GNAT) family
PKJOBBIB_00025 9.5e-236 L Transposase
PKJOBBIB_00026 2.8e-94 S ABC-type cobalt transport system, permease component
PKJOBBIB_00027 2.4e-240 P ABC transporter
PKJOBBIB_00028 2.3e-108 P cobalt transport
PKJOBBIB_00029 4.5e-126 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PKJOBBIB_00030 7.6e-83 thiW S Thiamine-precursor transporter protein (ThiW)
PKJOBBIB_00031 3.2e-150 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PKJOBBIB_00032 5.6e-107 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PKJOBBIB_00033 1.6e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PKJOBBIB_00034 1.3e-271 E Amino acid permease
PKJOBBIB_00035 7.4e-31
PKJOBBIB_00036 1.5e-186 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
PKJOBBIB_00037 8.6e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PKJOBBIB_00038 5.9e-283 rbsA 3.6.3.17 G ABC transporter
PKJOBBIB_00039 3.6e-145 rbsC U Belongs to the binding-protein-dependent transport system permease family
PKJOBBIB_00040 9.5e-167 rbsB G Periplasmic binding protein domain
PKJOBBIB_00041 3.1e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PKJOBBIB_00042 1.4e-40 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PKJOBBIB_00043 0.0 pbpC M NTF2-like N-terminal transpeptidase domain
PKJOBBIB_00044 2.1e-239 ydiC1 EGP Major facilitator Superfamily
PKJOBBIB_00045 1.4e-72 K helix_turn_helix multiple antibiotic resistance protein
PKJOBBIB_00046 1e-99
PKJOBBIB_00047 2.6e-24
PKJOBBIB_00048 4.2e-65 S Protein of unknown function (DUF1093)
PKJOBBIB_00049 1e-90
PKJOBBIB_00050 5.4e-86 V AAA domain, putative AbiEii toxin, Type IV TA system
PKJOBBIB_00051 2.5e-119
PKJOBBIB_00052 3.2e-100
PKJOBBIB_00053 1.2e-122
PKJOBBIB_00054 3.1e-268 frdC 1.3.5.4 C HI0933-like protein
PKJOBBIB_00055 3.5e-198 GKT transcriptional antiterminator
PKJOBBIB_00056 1.5e-49 ptxB 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
PKJOBBIB_00057 9.3e-210 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PKJOBBIB_00058 1.3e-67
PKJOBBIB_00059 7.5e-163 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PKJOBBIB_00060 8.1e-114 6.3.4.4 S Zeta toxin
PKJOBBIB_00061 1.2e-157 K Sugar-specific transcriptional regulator TrmB
PKJOBBIB_00062 3.4e-147 S Sulfite exporter TauE/SafE
PKJOBBIB_00063 8.6e-179 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
PKJOBBIB_00064 5e-150 3.1.1.24 S Alpha/beta hydrolase family
PKJOBBIB_00067 1.7e-69 pdxH S Pyridoxamine 5'-phosphate oxidase
PKJOBBIB_00068 4.2e-70 yqeB S Pyrimidine dimer DNA glycosylase
PKJOBBIB_00069 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00070 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00071 2.8e-55 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PKJOBBIB_00072 1.1e-101 G PTS system enzyme II sorbitol-specific factor
PKJOBBIB_00073 1.2e-130 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
PKJOBBIB_00075 7.8e-161 K sugar-binding domain protein
PKJOBBIB_00076 7.3e-236 L Transposase
PKJOBBIB_00077 2.2e-131 rihA F Inosine-uridine preferring nucleoside hydrolase
PKJOBBIB_00078 8.3e-199 EGP COG COG0477 Permeases of the major facilitator superfamily
PKJOBBIB_00079 2.8e-95 P Psort location CytoplasmicMembrane, score 9.49
PKJOBBIB_00080 1.6e-93 P Psort location CytoplasmicMembrane, score 9.49
PKJOBBIB_00081 2.5e-80 cbiQ P Psort location CytoplasmicMembrane, score 9.99
PKJOBBIB_00082 3.6e-68 2.7.7.65 T Psort location CytoplasmicMembrane, score 9.99
PKJOBBIB_00083 2.4e-174 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PKJOBBIB_00084 8e-133 gmuE 2.7.1.2, 2.7.1.4 GK ROK family
PKJOBBIB_00085 1.7e-118 K DeoR C terminal sensor domain
PKJOBBIB_00086 6.3e-63 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PKJOBBIB_00087 5.4e-45 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PKJOBBIB_00088 1.9e-158 G Phosphotransferase System
PKJOBBIB_00089 4.2e-113 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PKJOBBIB_00090 1.6e-163 fba 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PKJOBBIB_00091 5.2e-308 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PKJOBBIB_00092 5.9e-93 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PKJOBBIB_00093 9.9e-69 2.7.1.200, 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system
PKJOBBIB_00094 5.9e-38 2.7.1.200 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
PKJOBBIB_00095 1.7e-232 G PTS system sugar-specific permease component
PKJOBBIB_00096 4.5e-216 dgoD 4.2.1.6 M Mandelate racemase muconate lactonizing enzyme
PKJOBBIB_00097 8.1e-147 S Phosphotriesterase family
PKJOBBIB_00098 1.3e-167 G phosphotransferase system, EIIB
PKJOBBIB_00099 1.3e-113 O ADP-ribosylglycohydrolase
PKJOBBIB_00100 9.9e-47 K UTRA
PKJOBBIB_00101 1.8e-24
PKJOBBIB_00102 2e-21 L IS66 Orf2 like protein
PKJOBBIB_00103 2.4e-20 L Transposase IS66 family
PKJOBBIB_00104 4e-290 yeeA V Type II restriction enzyme, methylase subunits
PKJOBBIB_00105 1e-59 L Transposase DDE domain group 1
PKJOBBIB_00106 9e-62 L Transposase DDE domain group 1
PKJOBBIB_00107 1.6e-74 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_00108 3.8e-59 2.7.1.191 G PTS system fructose IIA component
PKJOBBIB_00109 1.5e-292 G PTS system sorbose-specific iic component
PKJOBBIB_00110 1.2e-110 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
PKJOBBIB_00111 1.7e-137 K helix_turn _helix lactose operon repressor
PKJOBBIB_00112 4.4e-16 umuD 3.4.21.88 K Peptidase S24-like
PKJOBBIB_00113 2.2e-28 2.7.1.191 G PTS system, fructose
PKJOBBIB_00114 3.4e-40 G PTS system sorbose subfamily IIB component
PKJOBBIB_00115 4.5e-79 G PTS system sorbose-specific iic component
PKJOBBIB_00116 4.5e-69 G PTS system mannose fructose sorbose family IID component
PKJOBBIB_00117 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00118 9e-37 opuCC M Substrate binding domain of ABC-type glycine betaine transport system
PKJOBBIB_00119 9e-65 U Binding-protein-dependent transport system inner membrane component
PKJOBBIB_00120 1.4e-162 P YhfZ C-terminal domain
PKJOBBIB_00121 5.6e-08
PKJOBBIB_00122 1.3e-55 yhfU S Protein of unknown function DUF2620
PKJOBBIB_00123 4e-192 yhfT S Protein of unknown function
PKJOBBIB_00124 3.1e-156 php S Phosphotriesterase family
PKJOBBIB_00125 3.1e-182 bioF 2.3.1.47, 2.8.1.6 E Cys/Met metabolism PLP-dependent enzyme
PKJOBBIB_00126 1.9e-201 yhfX E Alanine racemase, N-terminal domain
PKJOBBIB_00127 1.3e-232 yhfW G Metalloenzyme superfamily
PKJOBBIB_00128 5.6e-61 glvR K Helix-turn-helix domain, rpiR family
PKJOBBIB_00129 6.7e-176 amyA 2.4.1.7 GH13 G Alpha amylase, catalytic domain
PKJOBBIB_00130 5.8e-70 glxK 2.7.1.165 G Glycerate kinase family
PKJOBBIB_00131 8.4e-226 fryC 2.7.1.195, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PKJOBBIB_00132 4.2e-257 3.2.1.170, 3.2.1.24 GH38 G Alpha mannosidase, middle domain
PKJOBBIB_00133 3.2e-172 G mannose-6-phosphate isomerase
PKJOBBIB_00134 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00135 1.4e-158 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
PKJOBBIB_00136 4.2e-98 S UPF0397 protein
PKJOBBIB_00137 0.0 ykoD P ABC transporter, ATP-binding protein
PKJOBBIB_00138 2.2e-148 cbiQ P cobalt transport
PKJOBBIB_00139 7.9e-21 K helix_turn_helix, arabinose operon control protein
PKJOBBIB_00140 0.0 K Sigma-54 interaction domain
PKJOBBIB_00141 9e-72 levA G PTS system fructose IIA component
PKJOBBIB_00142 4.8e-90 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_00143 3e-153 M PTS system sorbose-specific iic component
PKJOBBIB_00144 1.9e-147 levD G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_00145 1.2e-55
PKJOBBIB_00146 6.6e-271 G Glycosyl hydrolases family 32
PKJOBBIB_00148 2.1e-235 L Transposase
PKJOBBIB_00149 1.6e-120 S Haloacid dehalogenase-like hydrolase
PKJOBBIB_00150 2.2e-134 fruR K DeoR C terminal sensor domain
PKJOBBIB_00151 1.8e-113 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
PKJOBBIB_00152 7.9e-97 hxlB 4.1.2.43, 5.3.1.27 M SIS domain
PKJOBBIB_00153 0.0 mtlF 2.7.1.197 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PKJOBBIB_00154 1.1e-217 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PKJOBBIB_00155 6.7e-190 odh 1.5.1.28 C NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
PKJOBBIB_00156 7e-133 E ABC transporter
PKJOBBIB_00157 2.8e-157 ET Bacterial periplasmic substrate-binding proteins
PKJOBBIB_00158 3.8e-114 P Binding-protein-dependent transport system inner membrane component
PKJOBBIB_00159 1.6e-115 P Binding-protein-dependent transport system inner membrane component
PKJOBBIB_00160 6.1e-238 kgtP EGP Sugar (and other) transporter
PKJOBBIB_00162 8.1e-12 S YvrJ protein family
PKJOBBIB_00163 2.4e-141 3.2.1.17 M hydrolase, family 25
PKJOBBIB_00164 8.7e-87 ygfC K Bacterial regulatory proteins, tetR family
PKJOBBIB_00165 5e-185 hrtB V ABC transporter permease
PKJOBBIB_00166 2.4e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PKJOBBIB_00167 1e-262 npr 1.11.1.1 C NADH oxidase
PKJOBBIB_00168 1.7e-151 S hydrolase
PKJOBBIB_00169 1.9e-43 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PKJOBBIB_00170 1.4e-184 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PKJOBBIB_00171 3e-84 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_00172 2.8e-127 G PTS system sorbose-specific iic component
PKJOBBIB_00173 8.2e-154 G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_00174 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PKJOBBIB_00175 6.8e-69 2.7.1.191 G PTS system fructose IIA component
PKJOBBIB_00176 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PKJOBBIB_00177 6.5e-310 md2 V ABC transporter
PKJOBBIB_00178 1.9e-303 yfiB V ABC transporter transmembrane region
PKJOBBIB_00180 0.0 pip V domain protein
PKJOBBIB_00181 3.1e-285 GK helix_turn_helix, arabinose operon control protein
PKJOBBIB_00182 9e-191 G Major Facilitator Superfamily
PKJOBBIB_00183 4.9e-252 abgB 3.5.1.47 S Peptidase dimerisation domain
PKJOBBIB_00184 1.9e-153 metQ_4 P Belongs to the nlpA lipoprotein family
PKJOBBIB_00185 2.9e-198 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PKJOBBIB_00186 1.3e-83
PKJOBBIB_00187 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
PKJOBBIB_00188 8.6e-15
PKJOBBIB_00189 4.1e-101 K Bacterial regulatory proteins, tetR family
PKJOBBIB_00190 7.3e-59 dhaM 2.7.1.121 S PTS system fructose IIA component
PKJOBBIB_00191 3.4e-103 dhaL 2.7.1.121 S Dak2
PKJOBBIB_00192 3.2e-189 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PKJOBBIB_00193 3.4e-76 ohr O OsmC-like protein
PKJOBBIB_00194 1.5e-269 L Exonuclease
PKJOBBIB_00195 1.8e-47 K Helix-turn-helix domain
PKJOBBIB_00196 8.4e-202 yceJ EGP Major facilitator Superfamily
PKJOBBIB_00197 2e-106 K Transcriptional
PKJOBBIB_00198 1.9e-106 tag 3.2.2.20 L glycosylase
PKJOBBIB_00199 1e-167 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PKJOBBIB_00200 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PKJOBBIB_00201 3.9e-195 V Beta-lactamase
PKJOBBIB_00202 5.3e-150 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PKJOBBIB_00203 1.4e-141 H Protein of unknown function (DUF1698)
PKJOBBIB_00204 5.7e-143 puuD S peptidase C26
PKJOBBIB_00205 8.1e-257 6.3.1.2 E Glutamine synthetase, catalytic domain
PKJOBBIB_00206 1.8e-220 S Amidohydrolase
PKJOBBIB_00207 1.8e-248 E Amino acid permease
PKJOBBIB_00208 1.4e-74 K helix_turn_helix, mercury resistance
PKJOBBIB_00209 5.4e-161 morA2 S reductase
PKJOBBIB_00210 3.6e-263 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GKT Mga helix-turn-helix domain
PKJOBBIB_00211 7e-104 L Resolvase, N terminal domain
PKJOBBIB_00212 0.0 yvcC M Cna protein B-type domain
PKJOBBIB_00213 4.3e-124 M domain protein
PKJOBBIB_00214 2.8e-185 M LPXTG cell wall anchor motif
PKJOBBIB_00215 5.1e-201 3.4.22.70 M Sortase family
PKJOBBIB_00216 4.3e-127 XK27_12140 V ATPases associated with a variety of cellular activities
PKJOBBIB_00217 5.7e-297 S Psort location CytoplasmicMembrane, score
PKJOBBIB_00218 2.2e-120 K Transcriptional regulatory protein, C terminal
PKJOBBIB_00219 4.6e-197 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PKJOBBIB_00220 1.8e-140 V ATPases associated with a variety of cellular activities
PKJOBBIB_00221 1.1e-209
PKJOBBIB_00222 1.7e-92
PKJOBBIB_00223 0.0 O Belongs to the peptidase S8 family
PKJOBBIB_00224 0.0 O Belongs to the peptidase S8 family
PKJOBBIB_00225 0.0 pepN 3.4.11.2 E aminopeptidase
PKJOBBIB_00226 7.1e-275 ycaM E amino acid
PKJOBBIB_00227 1.3e-77 S Protein of unknown function (DUF1440)
PKJOBBIB_00228 1.1e-164 K Transcriptional regulator, LysR family
PKJOBBIB_00229 1.2e-160 G Xylose isomerase-like TIM barrel
PKJOBBIB_00230 1.7e-140 IQ Enoyl-(Acyl carrier protein) reductase
PKJOBBIB_00231 3.6e-160 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PKJOBBIB_00232 3.2e-201 ydiN EGP Major Facilitator Superfamily
PKJOBBIB_00233 1.8e-167 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PKJOBBIB_00234 2.6e-157 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PKJOBBIB_00235 4.6e-174 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PKJOBBIB_00236 9.5e-236 L Transposase
PKJOBBIB_00237 8.4e-27
PKJOBBIB_00239 4.3e-222 L Belongs to the 'phage' integrase family
PKJOBBIB_00240 2.2e-09
PKJOBBIB_00243 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00245 3.4e-79
PKJOBBIB_00247 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00248 5e-187 L PFAM Integrase, catalytic core
PKJOBBIB_00251 1.8e-158
PKJOBBIB_00252 1.4e-49
PKJOBBIB_00253 3.1e-56
PKJOBBIB_00254 5.6e-52 L 4.5 Transposon and IS
PKJOBBIB_00255 8.6e-136 L Helix-turn-helix domain
PKJOBBIB_00256 3.9e-167 L hmm pf00665
PKJOBBIB_00257 9.8e-155 L 4.5 Transposon and IS
PKJOBBIB_00262 5.2e-31
PKJOBBIB_00263 5.1e-205
PKJOBBIB_00264 4e-207 M Domain of unknown function (DUF5011)
PKJOBBIB_00267 0.0 U TraM recognition site of TraD and TraG
PKJOBBIB_00268 2.3e-218 5.4.99.21 S domain, Protein
PKJOBBIB_00270 2.4e-104
PKJOBBIB_00271 0.0 trsE S COG0433 Predicted ATPase
PKJOBBIB_00272 6.4e-182 M cysteine-type peptidase activity
PKJOBBIB_00279 1.3e-219 3.1.1.32, 3.1.1.4 S COG0790 FOG TPR repeat, SEL1 subfamily
PKJOBBIB_00281 0.0 L Protein of unknown function (DUF3991)
PKJOBBIB_00282 4.2e-72
PKJOBBIB_00283 6.8e-63
PKJOBBIB_00284 1.1e-134 F DNA/RNA non-specific endonuclease
PKJOBBIB_00286 2.3e-81 tnp2PF3 L Transposase DDE domain
PKJOBBIB_00287 2.4e-58 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_00288 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PKJOBBIB_00289 6.9e-159 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PKJOBBIB_00290 1.9e-50 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PKJOBBIB_00291 4.8e-117 S CRISPR-associated protein (Cas_Csn2)
PKJOBBIB_00292 1.5e-177 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00293 9.3e-99 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PKJOBBIB_00294 6.7e-98 S Protease prsW family
PKJOBBIB_00296 1.4e-49 S Protein of unknown function (DUF1093)
PKJOBBIB_00298 4.9e-84 dps P Belongs to the Dps family
PKJOBBIB_00299 2.1e-157 L Integrase core domain
PKJOBBIB_00300 6e-105
PKJOBBIB_00302 1.5e-16 L Transposase and inactivated derivatives
PKJOBBIB_00303 2.3e-156 L Integrase core domain
PKJOBBIB_00304 2e-163 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PKJOBBIB_00305 3.1e-107 XK27_09620 S NADPH-dependent FMN reductase
PKJOBBIB_00306 1e-240 XK27_09615 S reductase
PKJOBBIB_00307 6.7e-72 S pyridoxamine 5-phosphate
PKJOBBIB_00308 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00309 7.9e-11 C Zinc-binding dehydrogenase
PKJOBBIB_00310 3.2e-14 L PFAM Integrase, catalytic core
PKJOBBIB_00311 5.8e-126 tnp L DDE domain
PKJOBBIB_00312 8.4e-99 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PKJOBBIB_00313 1.4e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PKJOBBIB_00314 4.1e-56 arsD S Arsenical resistance operon trans-acting repressor ArsD
PKJOBBIB_00315 2.1e-233 arsB U Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PKJOBBIB_00316 0.0 arsA 3.6.3.16 D Anion-transporting ATPase
PKJOBBIB_00317 2.7e-57 arsR K Helix-turn-helix domain
PKJOBBIB_00318 3.9e-102 tnpR2 L Helix-turn-helix domain of resolvase
PKJOBBIB_00319 4.5e-42 L Domain of unknown function (DUF4158)
PKJOBBIB_00320 6.7e-81 tnp2PF3 L Transposase DDE domain
PKJOBBIB_00321 2.4e-58 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_00322 1e-53 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_00323 3.1e-56 tnp2PF3 L Transposase DDE domain
PKJOBBIB_00324 1.1e-40 L Transposase DDE domain
PKJOBBIB_00325 1.8e-133 V AAA domain, putative AbiEii toxin, Type IV TA system
PKJOBBIB_00326 3.4e-164 V ABC-type multidrug transport system, permease component
PKJOBBIB_00327 1.2e-115 K Transcriptional regulator
PKJOBBIB_00328 5.8e-126 tnp L DDE domain
PKJOBBIB_00329 2.2e-20 2.1.1.72 S Adenine-specific methyltransferase EcoRI
PKJOBBIB_00330 9.1e-113 ybbL S ABC transporter, ATP-binding protein
PKJOBBIB_00331 2.9e-126 ybbM S Uncharacterised protein family (UPF0014)
PKJOBBIB_00332 5e-243 G MFS/sugar transport protein
PKJOBBIB_00333 4e-124 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00335 3.7e-67 tnp L DDE domain
PKJOBBIB_00336 2.4e-58 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_00337 1.9e-80 tnp2PF3 L Transposase DDE domain
PKJOBBIB_00338 8.9e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PKJOBBIB_00339 1.3e-176 proV E ABC transporter, ATP-binding protein
PKJOBBIB_00340 9.8e-247 gshR 1.8.1.7 C Glutathione reductase
PKJOBBIB_00341 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00342 8.8e-212 metC 4.4.1.8 E cystathionine
PKJOBBIB_00343 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00344 1e-76 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PKJOBBIB_00345 4.1e-122 tcyB E ABC transporter
PKJOBBIB_00346 3.4e-33
PKJOBBIB_00347 9.6e-253 brnQ U Component of the transport system for branched-chain amino acids
PKJOBBIB_00348 1.2e-70 S WxL domain surface cell wall-binding
PKJOBBIB_00349 9.4e-173 S Cell surface protein
PKJOBBIB_00350 1.5e-38
PKJOBBIB_00351 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PKJOBBIB_00352 1.2e-113 S WxL domain surface cell wall-binding
PKJOBBIB_00353 1.5e-56
PKJOBBIB_00354 3.9e-101 N WxL domain surface cell wall-binding
PKJOBBIB_00355 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PKJOBBIB_00356 1.3e-176 yicL EG EamA-like transporter family
PKJOBBIB_00357 5.8e-300
PKJOBBIB_00358 7.6e-146 CcmA5 V ABC transporter
PKJOBBIB_00359 1.3e-88 S ECF-type riboflavin transporter, S component
PKJOBBIB_00360 8.5e-148 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PKJOBBIB_00361 1.6e-165 metF 1.5.1.20 C Methylenetetrahydrofolate reductase
PKJOBBIB_00362 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PKJOBBIB_00363 0.0 XK27_09600 V ABC transporter, ATP-binding protein
PKJOBBIB_00364 0.0 V ABC transporter
PKJOBBIB_00365 4.2e-223 oxlT P Major Facilitator Superfamily
PKJOBBIB_00366 2.2e-128 treR K UTRA
PKJOBBIB_00367 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PKJOBBIB_00368 0.0 treB 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PKJOBBIB_00369 3.6e-217 sstT U Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PKJOBBIB_00370 1.9e-267 yfnA E Amino Acid
PKJOBBIB_00371 3e-173 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PKJOBBIB_00372 3.5e-252 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PKJOBBIB_00373 4.6e-31 K 'Cold-shock' DNA-binding domain
PKJOBBIB_00374 4.2e-66
PKJOBBIB_00375 1.9e-62 O OsmC-like protein
PKJOBBIB_00376 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00377 1.1e-278 lsa S ABC transporter
PKJOBBIB_00378 5.1e-113 ylbE GM NAD(P)H-binding
PKJOBBIB_00379 1.6e-157 yeaE S Aldo/keto reductase family
PKJOBBIB_00380 2e-250 yifK E Amino acid permease
PKJOBBIB_00381 6.5e-259 S Protein of unknown function (DUF3800)
PKJOBBIB_00382 0.0 yjcE P Sodium proton antiporter
PKJOBBIB_00383 9.6e-44 S Protein of unknown function (DUF3021)
PKJOBBIB_00384 1.7e-73 K LytTr DNA-binding domain
PKJOBBIB_00385 8.1e-149 cylB V ABC-2 type transporter
PKJOBBIB_00386 4.5e-163 cylA V ABC transporter
PKJOBBIB_00387 4.9e-145 S Alpha/beta hydrolase of unknown function (DUF915)
PKJOBBIB_00388 4.2e-121 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
PKJOBBIB_00389 2.6e-52 ybjQ S Belongs to the UPF0145 family
PKJOBBIB_00390 5.8e-158 3.5.1.10 C nadph quinone reductase
PKJOBBIB_00391 1.3e-246 amt P ammonium transporter
PKJOBBIB_00392 5.3e-178 yfeX P Peroxidase
PKJOBBIB_00393 2e-118 yhiD S MgtC family
PKJOBBIB_00394 1.1e-112 F DNA RNA non-specific endonuclease
PKJOBBIB_00395 3.9e-18 M Peptidoglycan-binding domain 1 protein
PKJOBBIB_00397 3.3e-07
PKJOBBIB_00399 1.6e-23
PKJOBBIB_00401 1.4e-17 mesE M Transport protein ComB
PKJOBBIB_00404 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00405 1.1e-121 gluP 3.4.21.105 S proteolysis
PKJOBBIB_00406 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00407 0.0 ybiT S ABC transporter, ATP-binding protein
PKJOBBIB_00408 0.0 mutS L ATPase domain of DNA mismatch repair MUTS family
PKJOBBIB_00409 2.2e-110 ung2 3.2.2.27 L Uracil-DNA glycosylase
PKJOBBIB_00410 6.8e-130 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PKJOBBIB_00411 3.8e-305 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PKJOBBIB_00412 6.5e-295 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PKJOBBIB_00413 5.5e-135 epsG 2.4.1.293 GT2 M Glycosyltransferase like family 2
PKJOBBIB_00414 1.3e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PKJOBBIB_00415 3.6e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PKJOBBIB_00416 1.9e-283 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PKJOBBIB_00417 1.9e-162 K Transcriptional regulator
PKJOBBIB_00418 7.6e-199 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PKJOBBIB_00421 7.2e-86 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PKJOBBIB_00422 1.4e-50 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
PKJOBBIB_00423 7.2e-267 gatC G PTS system sugar-specific permease component
PKJOBBIB_00424 1.9e-26
PKJOBBIB_00425 1.9e-124 S Domain of unknown function (DUF4867)
PKJOBBIB_00426 8.4e-176 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
PKJOBBIB_00427 9.5e-186 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
PKJOBBIB_00428 4.4e-94 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
PKJOBBIB_00429 2.7e-73 lacA 5.3.1.26 G Ribose/Galactose Isomerase
PKJOBBIB_00430 4.2e-141 lacR K DeoR C terminal sensor domain
PKJOBBIB_00431 3.8e-116 gph 3.1.3.18 S HAD hydrolase, family IA, variant
PKJOBBIB_00432 1.1e-211 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PKJOBBIB_00433 0.0 sbcC L Putative exonuclease SbcCD, C subunit
PKJOBBIB_00434 2.1e-14
PKJOBBIB_00435 2.2e-76 hsp1 O Belongs to the small heat shock protein (HSP20) family
PKJOBBIB_00437 6.5e-212 mutY L A G-specific adenine glycosylase
PKJOBBIB_00438 2.8e-148 cytC6 I alpha/beta hydrolase fold
PKJOBBIB_00439 2.1e-120 yrkL S Flavodoxin-like fold
PKJOBBIB_00441 3.4e-86 S Short repeat of unknown function (DUF308)
PKJOBBIB_00442 4.1e-118 S Psort location Cytoplasmic, score
PKJOBBIB_00443 1.6e-154 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PKJOBBIB_00444 8.2e-196
PKJOBBIB_00445 3e-07
PKJOBBIB_00446 2e-115 ywnB S NAD(P)H-binding
PKJOBBIB_00447 0.0 bglB 3.2.1.21 GH3 G hydrolase, family 3
PKJOBBIB_00448 6.1e-166 XK27_00670 S ABC transporter substrate binding protein
PKJOBBIB_00449 1.3e-163 XK27_00670 S ABC transporter
PKJOBBIB_00450 1.9e-154 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
PKJOBBIB_00451 1.2e-141 cmpC S ABC transporter, ATP-binding protein
PKJOBBIB_00452 5.2e-173 yhfP 1.1.1.1 C Zinc-binding dehydrogenase
PKJOBBIB_00453 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
PKJOBBIB_00454 6.2e-182 ykcC GT2 M Glycosyl transferase family 2
PKJOBBIB_00455 0.0 ykcB M Dolichyl-phosphate-mannose-protein mannosyltransferase
PKJOBBIB_00456 9.2e-71 S GtrA-like protein
PKJOBBIB_00457 5.3e-124 K cheY-homologous receiver domain
PKJOBBIB_00458 2.4e-242 ciaH 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PKJOBBIB_00459 3.1e-68 yqkB S Belongs to the HesB IscA family
PKJOBBIB_00460 5.4e-270 QT PucR C-terminal helix-turn-helix domain
PKJOBBIB_00461 1.3e-162 ptlF S KR domain
PKJOBBIB_00462 8.2e-54 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PKJOBBIB_00463 2e-92 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PKJOBBIB_00464 4.1e-121 drgA C Nitroreductase family
PKJOBBIB_00465 3.1e-206 lctO C IMP dehydrogenase / GMP reductase domain
PKJOBBIB_00468 2.9e-177 K DNA-binding helix-turn-helix protein
PKJOBBIB_00469 1.5e-58 K Transcriptional regulator PadR-like family
PKJOBBIB_00470 1.2e-41 ygbF S Sugar efflux transporter for intercellular exchange
PKJOBBIB_00471 8.7e-42
PKJOBBIB_00472 7e-192 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PKJOBBIB_00474 7e-54
PKJOBBIB_00475 1.5e-80
PKJOBBIB_00476 3.2e-209 yubA S AI-2E family transporter
PKJOBBIB_00477 3.1e-24
PKJOBBIB_00478 1.5e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PKJOBBIB_00479 1e-44
PKJOBBIB_00480 7.9e-166 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PKJOBBIB_00481 1.5e-88 ywrF S Flavin reductase like domain
PKJOBBIB_00482 1.1e-71
PKJOBBIB_00483 3.7e-94 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PKJOBBIB_00484 5.7e-61 yeaO S Protein of unknown function, DUF488
PKJOBBIB_00485 1.1e-172 corA P CorA-like Mg2+ transporter protein
PKJOBBIB_00486 3.1e-156 mleR K LysR family
PKJOBBIB_00487 0.0 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PKJOBBIB_00488 3.2e-170 mleP S Sodium Bile acid symporter family
PKJOBBIB_00489 1.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PKJOBBIB_00490 9.4e-86 C FMN binding
PKJOBBIB_00491 0.0 pepF E Oligopeptidase F
PKJOBBIB_00492 4.1e-59
PKJOBBIB_00493 1.2e-132 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PKJOBBIB_00494 1.7e-81 ndk 2.7.4.6 F Belongs to the NDK family
PKJOBBIB_00495 0.0 yfgQ P E1-E2 ATPase
PKJOBBIB_00496 1.9e-180 3.4.11.5 I carboxylic ester hydrolase activity
PKJOBBIB_00497 2.6e-45
PKJOBBIB_00498 2.6e-94 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PKJOBBIB_00499 1.9e-198 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PKJOBBIB_00500 2.2e-122 gph 3.1.3.18 S haloacid dehalogenase-like hydrolase
PKJOBBIB_00501 8.8e-78 K Transcriptional regulator
PKJOBBIB_00502 2.8e-179 D Alpha beta
PKJOBBIB_00503 1.9e-83 nrdI F Belongs to the NrdI family
PKJOBBIB_00504 1.3e-156 dkgB S reductase
PKJOBBIB_00505 2.2e-155
PKJOBBIB_00506 2.2e-143 S Alpha beta hydrolase
PKJOBBIB_00507 6.6e-119 yviA S Protein of unknown function (DUF421)
PKJOBBIB_00508 3.5e-74 S Protein of unknown function (DUF3290)
PKJOBBIB_00509 1.6e-221 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
PKJOBBIB_00510 2.2e-87 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PKJOBBIB_00511 1.4e-104 yjbF S SNARE associated Golgi protein
PKJOBBIB_00512 6e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PKJOBBIB_00513 5.5e-189 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PKJOBBIB_00514 3.1e-206 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PKJOBBIB_00515 8.8e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PKJOBBIB_00516 1.2e-65 yajC U Preprotein translocase
PKJOBBIB_00517 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PKJOBBIB_00518 8.7e-116 sirR K Helix-turn-helix diphteria tox regulatory element
PKJOBBIB_00519 1.1e-291 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PKJOBBIB_00520 2.7e-205 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PKJOBBIB_00521 2.3e-240 ytoI K DRTGG domain
PKJOBBIB_00522 3.7e-179 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PKJOBBIB_00523 1.9e-250 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PKJOBBIB_00524 8.6e-173
PKJOBBIB_00525 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PKJOBBIB_00527 4e-43 yrzL S Belongs to the UPF0297 family
PKJOBBIB_00528 1.6e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PKJOBBIB_00529 6.8e-53 yrzB S Belongs to the UPF0473 family
PKJOBBIB_00530 1.7e-35 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PKJOBBIB_00531 9.5e-92 cvpA S Colicin V production protein
PKJOBBIB_00532 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PKJOBBIB_00533 6.6e-53 trxA O Belongs to the thioredoxin family
PKJOBBIB_00534 1.1e-294 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PKJOBBIB_00535 2.6e-238 dltB M MBOAT, membrane-bound O-acyltransferase family
PKJOBBIB_00536 1.2e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PKJOBBIB_00537 9.7e-244 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PKJOBBIB_00538 2.7e-85 yslB S Protein of unknown function (DUF2507)
PKJOBBIB_00539 1.9e-275 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PKJOBBIB_00540 2.5e-97 S Phosphoesterase
PKJOBBIB_00541 2.5e-135 gla U Major intrinsic protein
PKJOBBIB_00542 2.1e-85 ykuL S CBS domain
PKJOBBIB_00543 2.4e-156 XK27_00890 S Domain of unknown function (DUF368)
PKJOBBIB_00544 2.5e-153 ykuT M mechanosensitive ion channel
PKJOBBIB_00545 6e-12 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PKJOBBIB_00546 1.2e-86 ytxH S YtxH-like protein
PKJOBBIB_00547 6.7e-90 niaR S 3H domain
PKJOBBIB_00548 1.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PKJOBBIB_00549 6e-180 ccpA K catabolite control protein A
PKJOBBIB_00550 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
PKJOBBIB_00551 4e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S HAD-hyrolase-like
PKJOBBIB_00552 6.1e-137 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PKJOBBIB_00553 1.3e-273 pepV 3.5.1.18 E dipeptidase PepV
PKJOBBIB_00554 1.5e-258 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PKJOBBIB_00555 6.1e-54
PKJOBBIB_00556 2.2e-188 yibE S overlaps another CDS with the same product name
PKJOBBIB_00557 1.4e-114 yibF S overlaps another CDS with the same product name
PKJOBBIB_00558 1.8e-115 S Calcineurin-like phosphoesterase
PKJOBBIB_00559 9.8e-266 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PKJOBBIB_00560 6e-117 yutD S Protein of unknown function (DUF1027)
PKJOBBIB_00561 2.8e-145 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PKJOBBIB_00562 3.3e-112 S Protein of unknown function (DUF1461)
PKJOBBIB_00563 5.2e-116 dedA S SNARE-like domain protein
PKJOBBIB_00564 6.7e-87 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
PKJOBBIB_00565 7.9e-185 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PKJOBBIB_00566 2.5e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PKJOBBIB_00567 1.1e-62 yugI 5.3.1.9 J general stress protein
PKJOBBIB_00568 1.8e-34
PKJOBBIB_00569 6.4e-69 S COG NOG38524 non supervised orthologous group
PKJOBBIB_00570 4e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
PKJOBBIB_00596 1e-93 sigH K DNA-templated transcription, initiation
PKJOBBIB_00597 1e-283 ybeC E amino acid
PKJOBBIB_00599 3.4e-230 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PKJOBBIB_00600 7.2e-197 cpoA GT4 M Glycosyltransferase, group 1 family protein
PKJOBBIB_00601 1.9e-165 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PKJOBBIB_00603 2e-219 patA 2.6.1.1 E Aminotransferase
PKJOBBIB_00604 1.9e-43 ykuJ S Protein of unknown function (DUF1797)
PKJOBBIB_00605 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PKJOBBIB_00606 4e-80 perR P Belongs to the Fur family
PKJOBBIB_00607 1.8e-34
PKJOBBIB_00608 6.4e-69 S COG NOG38524 non supervised orthologous group
PKJOBBIB_00609 4e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
PKJOBBIB_00613 1.9e-70
PKJOBBIB_00614 9.5e-209 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PKJOBBIB_00615 4e-265 emrY EGP Major facilitator Superfamily
PKJOBBIB_00616 3.9e-72 merR K MerR HTH family regulatory protein
PKJOBBIB_00617 8.1e-266 lmrB EGP Major facilitator Superfamily
PKJOBBIB_00618 8.9e-109 S Domain of unknown function (DUF4811)
PKJOBBIB_00619 3.1e-119 3.6.1.27 I Acid phosphatase homologues
PKJOBBIB_00620 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PKJOBBIB_00621 1.9e-279 ytgP S Polysaccharide biosynthesis protein
PKJOBBIB_00622 7.6e-129 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PKJOBBIB_00623 1.4e-33 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
PKJOBBIB_00624 1.8e-142 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PKJOBBIB_00625 1.3e-93 FNV0100 F NUDIX domain
PKJOBBIB_00627 1.2e-288 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
PKJOBBIB_00628 7.1e-305 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
PKJOBBIB_00629 1.4e-86 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PKJOBBIB_00632 3.9e-234 malY 4.4.1.8 E Aminotransferase, class I
PKJOBBIB_00633 2.9e-259 cpdA S Calcineurin-like phosphoesterase
PKJOBBIB_00634 1e-38 gcvR T Belongs to the UPF0237 family
PKJOBBIB_00635 5.5e-245 XK27_08635 S UPF0210 protein
PKJOBBIB_00636 1.9e-213 coiA 3.6.4.12 S Competence protein
PKJOBBIB_00637 1.1e-113 yjbH Q Thioredoxin
PKJOBBIB_00638 7.5e-106 yjbK S CYTH
PKJOBBIB_00639 1.3e-122 yjbM 2.7.6.5 S RelA SpoT domain protein
PKJOBBIB_00640 1.8e-150 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PKJOBBIB_00641 5.1e-170 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PKJOBBIB_00642 2.4e-203 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PKJOBBIB_00643 3.7e-111 cutC P Participates in the control of copper homeostasis
PKJOBBIB_00644 2.1e-143 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PKJOBBIB_00645 6e-199 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PKJOBBIB_00646 2.5e-62 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PKJOBBIB_00647 3.5e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PKJOBBIB_00648 5.7e-191 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PKJOBBIB_00649 2.8e-171 corA P CorA-like Mg2+ transporter protein
PKJOBBIB_00650 1.1e-155 rrmA 2.1.1.187 H Methyltransferase
PKJOBBIB_00651 2.3e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PKJOBBIB_00652 8.4e-72 WQ51_03320 S Protein of unknown function (DUF1149)
PKJOBBIB_00653 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PKJOBBIB_00654 4.2e-231 ymfF S Peptidase M16 inactive domain protein
PKJOBBIB_00655 4.2e-242 ymfH S Peptidase M16
PKJOBBIB_00656 6e-129 IQ Enoyl-(Acyl carrier protein) reductase
PKJOBBIB_00657 1.3e-109 ymfM S Helix-turn-helix domain
PKJOBBIB_00658 1.9e-104 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PKJOBBIB_00659 7.1e-231 cinA 3.5.1.42 S Belongs to the CinA family
PKJOBBIB_00660 1.6e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PKJOBBIB_00661 3.1e-231 rny S Endoribonuclease that initiates mRNA decay
PKJOBBIB_00662 5.2e-116 yvyE 3.4.13.9 S YigZ family
PKJOBBIB_00663 2.8e-235 comFA L Helicase C-terminal domain protein
PKJOBBIB_00664 2.3e-82 comFC S Competence protein
PKJOBBIB_00665 2.1e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PKJOBBIB_00666 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PKJOBBIB_00667 3.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PKJOBBIB_00668 5.4e-124 ftsE D ABC transporter
PKJOBBIB_00670 8e-202 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PKJOBBIB_00671 2.4e-130 K response regulator
PKJOBBIB_00672 1.1e-308 phoR 2.7.13.3 T Histidine kinase
PKJOBBIB_00673 1.2e-152 pstS P Phosphate
PKJOBBIB_00674 3.6e-155 pstC P probably responsible for the translocation of the substrate across the membrane
PKJOBBIB_00675 4.8e-157 pstA P Phosphate transport system permease protein PstA
PKJOBBIB_00676 1.2e-149 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PKJOBBIB_00677 1.6e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PKJOBBIB_00678 1e-119 phoU P Plays a role in the regulation of phosphate uptake
PKJOBBIB_00679 9.2e-262 yvlB S Putative adhesin
PKJOBBIB_00680 1.4e-30
PKJOBBIB_00681 4.4e-34 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PKJOBBIB_00682 2.1e-174 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PKJOBBIB_00683 2e-157 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PKJOBBIB_00684 6.9e-195 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PKJOBBIB_00685 2.4e-178 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PKJOBBIB_00686 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PKJOBBIB_00687 2e-112 T Transcriptional regulatory protein, C terminal
PKJOBBIB_00688 1e-174 T His Kinase A (phosphoacceptor) domain
PKJOBBIB_00689 2e-91 V ABC transporter
PKJOBBIB_00690 0.0 V FtsX-like permease family
PKJOBBIB_00691 6.5e-119 yfbR S HD containing hydrolase-like enzyme
PKJOBBIB_00692 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PKJOBBIB_00693 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PKJOBBIB_00694 1.8e-85 S Short repeat of unknown function (DUF308)
PKJOBBIB_00695 9.7e-166 rapZ S Displays ATPase and GTPase activities
PKJOBBIB_00696 2.4e-192 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PKJOBBIB_00697 8.2e-171 whiA K May be required for sporulation
PKJOBBIB_00698 3.2e-80 ohrR K helix_turn_helix multiple antibiotic resistance protein
PKJOBBIB_00699 1.9e-101 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PKJOBBIB_00701 6.6e-215 L Belongs to the 'phage' integrase family
PKJOBBIB_00704 6.3e-22 E Zn peptidase
PKJOBBIB_00705 1.9e-48 ps115 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_00706 3.9e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00708 1.2e-10
PKJOBBIB_00711 7.6e-39 F nucleoside 2-deoxyribosyltransferase
PKJOBBIB_00713 1.5e-22
PKJOBBIB_00716 1.6e-57 S Domain of unknown function (DUF771)
PKJOBBIB_00719 8.9e-22
PKJOBBIB_00722 2.8e-82 S Siphovirus Gp157
PKJOBBIB_00723 2.2e-257 res L Helicase C-terminal domain protein
PKJOBBIB_00724 4.6e-129 L AAA domain
PKJOBBIB_00725 1.2e-91
PKJOBBIB_00726 1.5e-149 L Bifunctional DNA primase/polymerase, N-terminal
PKJOBBIB_00727 6.4e-224 S Virulence-associated protein E
PKJOBBIB_00728 3.9e-53 S VRR_NUC
PKJOBBIB_00729 3.7e-42
PKJOBBIB_00731 2.4e-104 S HNH endonuclease
PKJOBBIB_00733 9.2e-71 S Transcriptional regulator, RinA family
PKJOBBIB_00734 3.6e-23 V HNH nucleases
PKJOBBIB_00735 1e-25 L Phage terminase, small subunit
PKJOBBIB_00736 2.4e-216 S Terminase
PKJOBBIB_00737 1.4e-109 S Phage portal protein
PKJOBBIB_00738 7.6e-37 S Caudovirus prohead serine protease
PKJOBBIB_00739 7e-53 S peptidase activity
PKJOBBIB_00740 1.5e-14 pi235
PKJOBBIB_00741 4.2e-11
PKJOBBIB_00742 3.2e-22 S Psort location Cytoplasmic, score
PKJOBBIB_00743 7.2e-11
PKJOBBIB_00744 5.5e-43 S phage tail protein
PKJOBBIB_00745 2.3e-20
PKJOBBIB_00747 4.4e-112 D Phage tail tape measure protein
PKJOBBIB_00748 4.5e-17 S phage tail
PKJOBBIB_00749 2.2e-223 tcdA2 GT2,GT4 LM gp58-like protein
PKJOBBIB_00750 3.8e-46
PKJOBBIB_00751 6.5e-28
PKJOBBIB_00752 5.5e-22
PKJOBBIB_00754 1.2e-27
PKJOBBIB_00755 2.9e-116 S peptidoglycan catabolic process
PKJOBBIB_00756 5.2e-23 doc
PKJOBBIB_00758 1.1e-17 M Host cell surface-exposed lipoprotein
PKJOBBIB_00759 4e-187 cggR K Putative sugar-binding domain
PKJOBBIB_00760 2.8e-193 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PKJOBBIB_00761 4.4e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PKJOBBIB_00762 7.8e-140 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PKJOBBIB_00763 9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PKJOBBIB_00764 1e-229 mdt(A) EGP Major facilitator Superfamily
PKJOBBIB_00765 9e-47
PKJOBBIB_00766 4.8e-293 clcA P chloride
PKJOBBIB_00767 2.4e-31 secG U Preprotein translocase
PKJOBBIB_00768 1.5e-140 est 3.1.1.1 S Serine aminopeptidase, S33
PKJOBBIB_00769 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PKJOBBIB_00770 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PKJOBBIB_00771 2e-177 yvdE K helix_turn _helix lactose operon repressor
PKJOBBIB_00772 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PKJOBBIB_00773 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PKJOBBIB_00774 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PKJOBBIB_00775 9.1e-119 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
PKJOBBIB_00776 1e-15 msmX P Belongs to the ABC transporter superfamily
PKJOBBIB_00777 5.7e-17
PKJOBBIB_00778 2.5e-23 ydcG K Helix-turn-helix XRE-family like proteins
PKJOBBIB_00779 2.4e-239 YSH1 S Metallo-beta-lactamase superfamily
PKJOBBIB_00780 4.4e-231 malE G Bacterial extracellular solute-binding protein
PKJOBBIB_00781 1.9e-147 malF G Binding-protein-dependent transport system inner membrane component
PKJOBBIB_00782 5.7e-166 malG P ABC-type sugar transport systems, permease components
PKJOBBIB_00783 3.5e-194 malK P ATPases associated with a variety of cellular activities
PKJOBBIB_00784 1.4e-104 3.2.2.20 K Acetyltransferase (GNAT) domain
PKJOBBIB_00785 9e-92 yxjI
PKJOBBIB_00786 3.1e-156 ycsE S Sucrose-6F-phosphate phosphohydrolase
PKJOBBIB_00787 2.5e-129 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PKJOBBIB_00788 2.1e-177 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PKJOBBIB_00789 2.9e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PKJOBBIB_00791 2.4e-164 natA S ABC transporter, ATP-binding protein
PKJOBBIB_00792 8e-214 ysdA CP ABC-2 family transporter protein
PKJOBBIB_00793 2.4e-98 dnaQ 2.7.7.7 L DNA polymerase III
PKJOBBIB_00794 2.9e-150 xth 3.1.11.2 L exodeoxyribonuclease III
PKJOBBIB_00795 2.4e-167 murB 1.3.1.98 M Cell wall formation
PKJOBBIB_00796 0.0 yjcE P Sodium proton antiporter
PKJOBBIB_00797 2.9e-96 puuR K Cupin domain
PKJOBBIB_00798 4e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PKJOBBIB_00799 7.2e-147 potB P ABC transporter permease
PKJOBBIB_00800 4.1e-142 potC P ABC transporter permease
PKJOBBIB_00801 8e-207 potD P ABC transporter
PKJOBBIB_00803 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PKJOBBIB_00804 1.1e-110 K Transcriptional regulator
PKJOBBIB_00805 8.6e-183 V ABC transporter
PKJOBBIB_00806 2.7e-129 V AAA domain, putative AbiEii toxin, Type IV TA system
PKJOBBIB_00807 2.2e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PKJOBBIB_00808 6.3e-167 ybbR S YbbR-like protein
PKJOBBIB_00809 9.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PKJOBBIB_00810 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PKJOBBIB_00811 0.0 pepF2 E Oligopeptidase F
PKJOBBIB_00812 1.5e-78 S VanZ like family
PKJOBBIB_00813 7.6e-132 yebC K Transcriptional regulatory protein
PKJOBBIB_00814 9.2e-153 comGA NU Type II IV secretion system protein
PKJOBBIB_00815 6.9e-170 comGB NU type II secretion system
PKJOBBIB_00816 1.9e-26
PKJOBBIB_00818 2.5e-23
PKJOBBIB_00819 1.9e-19
PKJOBBIB_00820 9.7e-10
PKJOBBIB_00821 9e-184 ytxK 2.1.1.72 L N-6 DNA Methylase
PKJOBBIB_00822 3.1e-51
PKJOBBIB_00823 2.4e-256 cycA E Amino acid permease
PKJOBBIB_00824 6.7e-147 arbV 2.3.1.51 I Phosphate acyltransferases
PKJOBBIB_00825 2.5e-163 arbx M Glycosyl transferase family 8
PKJOBBIB_00826 3.6e-182 arbY M family 8
PKJOBBIB_00827 2.8e-165 arbZ I Phosphate acyltransferases
PKJOBBIB_00828 0.0 rafA 3.2.1.22 G alpha-galactosidase
PKJOBBIB_00830 3.6e-213 sip L Belongs to the 'phage' integrase family
PKJOBBIB_00831 8.7e-92 K sequence-specific DNA binding
PKJOBBIB_00832 2.3e-41
PKJOBBIB_00833 1.3e-29
PKJOBBIB_00834 2.2e-16
PKJOBBIB_00835 2.8e-25
PKJOBBIB_00837 6.6e-24
PKJOBBIB_00838 8.9e-150 L Bifunctional DNA primase/polymerase, N-terminal
PKJOBBIB_00839 2.8e-301 S Phage plasmid primase, P4
PKJOBBIB_00840 3.9e-51 S Phage head-tail joining protein
PKJOBBIB_00842 2.8e-24 L Phage-associated protein
PKJOBBIB_00843 1.5e-80 terS L Phage terminase, small subunit
PKJOBBIB_00844 6e-305 terL S overlaps another CDS with the same product name
PKJOBBIB_00845 2.6e-19
PKJOBBIB_00846 5.9e-219 S Phage portal protein
PKJOBBIB_00847 2.9e-274 S Phage capsid family
PKJOBBIB_00848 7.4e-46 S Phage gp6-like head-tail connector protein
PKJOBBIB_00849 2.9e-16
PKJOBBIB_00850 2.2e-14 ytgB S Transglycosylase associated protein
PKJOBBIB_00852 4.4e-70 S SdpI/YhfL protein family
PKJOBBIB_00853 1.4e-133 K response regulator
PKJOBBIB_00854 5.7e-272 T PhoQ Sensor
PKJOBBIB_00855 3.6e-75 yhbS S acetyltransferase
PKJOBBIB_00856 5.3e-14
PKJOBBIB_00857 1.5e-71 pheB 5.4.99.5 S Belongs to the UPF0735 family
PKJOBBIB_00858 1e-63
PKJOBBIB_00859 5.9e-55
PKJOBBIB_00860 3.1e-253 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PKJOBBIB_00862 2e-190 S response to antibiotic
PKJOBBIB_00863 2.1e-127 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PKJOBBIB_00864 3.8e-27 yjgN S Bacterial protein of unknown function (DUF898)
PKJOBBIB_00866 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PKJOBBIB_00867 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PKJOBBIB_00868 5.2e-212 camS S sex pheromone
PKJOBBIB_00869 3.7e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PKJOBBIB_00870 8.8e-265 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PKJOBBIB_00871 8e-279 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PKJOBBIB_00872 9.8e-194 yegS 2.7.1.107 G Lipid kinase
PKJOBBIB_00873 3.7e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PKJOBBIB_00874 1.1e-218 yttB EGP Major facilitator Superfamily
PKJOBBIB_00875 5.6e-147 cof S Sucrose-6F-phosphate phosphohydrolase
PKJOBBIB_00876 2.4e-164 S Polyphosphate nucleotide phosphotransferase, PPK2 family
PKJOBBIB_00877 0.0 pepO 3.4.24.71 O Peptidase family M13
PKJOBBIB_00878 4.2e-264 ydiC1 EGP Major facilitator Superfamily
PKJOBBIB_00879 2.2e-81 K Acetyltransferase (GNAT) family
PKJOBBIB_00880 4.3e-166 degV S Uncharacterised protein, DegV family COG1307
PKJOBBIB_00881 1.9e-119 qmcA O prohibitin homologues
PKJOBBIB_00882 1.2e-28
PKJOBBIB_00883 2.9e-139 lys M Glycosyl hydrolases family 25
PKJOBBIB_00884 2.2e-60 S Protein of unknown function (DUF1093)
PKJOBBIB_00885 1.7e-60 S Domain of unknown function (DUF4828)
PKJOBBIB_00886 1.9e-175 mocA S Oxidoreductase
PKJOBBIB_00887 9.9e-236 yfmL 3.6.4.13 L DEAD DEAH box helicase
PKJOBBIB_00888 7.6e-56 chbA 2.7.1.196, 2.7.1.205 G phosphoenolpyruvate-dependent sugar phosphotransferase system
PKJOBBIB_00889 7.3e-71 S Domain of unknown function (DUF3284)
PKJOBBIB_00891 4.4e-07
PKJOBBIB_00892 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PKJOBBIB_00893 6.3e-240 pepS E Thermophilic metalloprotease (M29)
PKJOBBIB_00894 9.4e-112 K Bacterial regulatory proteins, tetR family
PKJOBBIB_00896 2.3e-259 S Uncharacterized protein conserved in bacteria (DUF2252)
PKJOBBIB_00897 6e-180 yihY S Belongs to the UPF0761 family
PKJOBBIB_00898 7.2e-80 fld C Flavodoxin
PKJOBBIB_00899 4.8e-159 map 3.4.11.18 E Methionine Aminopeptidase
PKJOBBIB_00900 5.3e-203 M Glycosyltransferase like family 2
PKJOBBIB_00902 3.1e-14
PKJOBBIB_00903 8.9e-198 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PKJOBBIB_00904 1.1e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PKJOBBIB_00907 1.4e-41 M transferase activity, transferring glycosyl groups
PKJOBBIB_00908 1.2e-39 nss M transferase activity, transferring glycosyl groups
PKJOBBIB_00910 2.8e-252 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PKJOBBIB_00911 8.4e-60 secY2 U SecY translocase
PKJOBBIB_00912 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00913 8.8e-54 bglH 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PKJOBBIB_00914 1.4e-150 licT2 K CAT RNA binding domain
PKJOBBIB_00915 0.0 S Bacterial membrane protein YfhO
PKJOBBIB_00916 0.0 S Psort location CytoplasmicMembrane, score
PKJOBBIB_00917 7.5e-169 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PKJOBBIB_00918 3.4e-72
PKJOBBIB_00919 6.6e-168 yqjA S Putative aromatic acid exporter C-terminal domain
PKJOBBIB_00920 8.7e-12
PKJOBBIB_00921 1.6e-31 cspC K Cold shock protein
PKJOBBIB_00922 1.9e-83 yvbK 3.1.3.25 K GNAT family
PKJOBBIB_00923 1.9e-115 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PKJOBBIB_00924 5.5e-101 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PKJOBBIB_00925 6.8e-240 pbuX F xanthine permease
PKJOBBIB_00926 3.3e-203 purK2 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PKJOBBIB_00927 4e-245 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PKJOBBIB_00928 2.8e-105
PKJOBBIB_00929 1.8e-104
PKJOBBIB_00930 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PKJOBBIB_00931 4.7e-111 vanZ V VanZ like family
PKJOBBIB_00932 2e-152 glcU U sugar transport
PKJOBBIB_00933 5.6e-258 pgi 5.3.1.9 G Belongs to the GPI family
PKJOBBIB_00934 9.3e-127 S Domain of unknown function DUF1829
PKJOBBIB_00935 2.9e-47 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
PKJOBBIB_00937 2.6e-152 F DNA/RNA non-specific endonuclease
PKJOBBIB_00938 1.7e-70 yttA 2.7.13.3 S Pfam Transposase IS66
PKJOBBIB_00939 2.5e-230 wbbX GT2,GT4 M Glycosyl transferases group 1
PKJOBBIB_00940 1e-173 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
PKJOBBIB_00941 9.9e-85 guaD 3.5.4.12, 3.5.4.3, 3.5.4.33 FJ MafB19-like deaminase
PKJOBBIB_00943 1.3e-47 int L Belongs to the 'phage' integrase family
PKJOBBIB_00944 5.2e-25
PKJOBBIB_00945 3e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_00946 4e-91
PKJOBBIB_00948 6.8e-113 V Abi-like protein
PKJOBBIB_00949 1e-27
PKJOBBIB_00950 2.4e-78 tspO T TspO/MBR family
PKJOBBIB_00951 3.2e-13
PKJOBBIB_00952 2.1e-211 yttB EGP Major facilitator Superfamily
PKJOBBIB_00953 7.2e-104 S Protein of unknown function (DUF1211)
PKJOBBIB_00954 1.2e-285 pipD E Dipeptidase
PKJOBBIB_00956 1.6e-07
PKJOBBIB_00957 5.9e-129 G Phosphoglycerate mutase family
PKJOBBIB_00958 5.9e-120 K Bacterial regulatory proteins, tetR family
PKJOBBIB_00959 0.0 ycfI V ABC transporter, ATP-binding protein
PKJOBBIB_00960 0.0 yfiC V ABC transporter
PKJOBBIB_00961 3.5e-140 S NADPH-dependent FMN reductase
PKJOBBIB_00962 2.6e-163 1.13.11.2 S glyoxalase
PKJOBBIB_00963 1e-195 ampC V Beta-lactamase
PKJOBBIB_00964 1.1e-261 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PKJOBBIB_00965 6.6e-110 tdk 2.7.1.21 F thymidine kinase
PKJOBBIB_00966 1.9e-176 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PKJOBBIB_00967 1.3e-151 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PKJOBBIB_00968 3.6e-185 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PKJOBBIB_00969 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PKJOBBIB_00970 5.7e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PKJOBBIB_00971 4.6e-126 atpB C it plays a direct role in the translocation of protons across the membrane
PKJOBBIB_00972 3.3e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PKJOBBIB_00973 3.1e-41 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PKJOBBIB_00974 5.9e-89 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PKJOBBIB_00975 9.5e-286 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PKJOBBIB_00976 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PKJOBBIB_00977 1.3e-244 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PKJOBBIB_00978 8.3e-70 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PKJOBBIB_00979 4.2e-31 ywzB S Protein of unknown function (DUF1146)
PKJOBBIB_00980 1.1e-178 mbl D Cell shape determining protein MreB Mrl
PKJOBBIB_00981 2.2e-18 epuA S DNA-directed RNA polymerase subunit beta
PKJOBBIB_00982 9.1e-55 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PKJOBBIB_00983 1.1e-30 S Protein of unknown function (DUF2969)
PKJOBBIB_00984 1.8e-223 rodA D Belongs to the SEDS family
PKJOBBIB_00985 9.5e-49 gcvH E glycine cleavage
PKJOBBIB_00986 1.7e-221 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PKJOBBIB_00987 4e-137 P Belongs to the nlpA lipoprotein family
PKJOBBIB_00988 2e-149 P Belongs to the nlpA lipoprotein family
PKJOBBIB_00989 6.1e-191 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PKJOBBIB_00990 2.4e-103 metI P ABC transporter permease
PKJOBBIB_00991 6.5e-142 sufC O FeS assembly ATPase SufC
PKJOBBIB_00992 1.9e-189 sufD O FeS assembly protein SufD
PKJOBBIB_00993 3.7e-221 csdA 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PKJOBBIB_00994 1e-78 nifU C SUF system FeS assembly protein, NifU family
PKJOBBIB_00995 1.1e-280 sufB O assembly protein SufB
PKJOBBIB_00996 2.7e-22
PKJOBBIB_00997 2.9e-66 yueI S Protein of unknown function (DUF1694)
PKJOBBIB_00998 1.5e-180 S Protein of unknown function (DUF2785)
PKJOBBIB_00999 3e-116 yhfA S HAD hydrolase, family IA, variant 3
PKJOBBIB_01000 2.1e-152 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_01001 2.9e-82 usp6 T universal stress protein
PKJOBBIB_01002 9.2e-38
PKJOBBIB_01004 3e-240 rarA L recombination factor protein RarA
PKJOBBIB_01005 0.0 gshF 6.3.2.2, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
PKJOBBIB_01006 6e-76 yueI S Protein of unknown function (DUF1694)
PKJOBBIB_01007 1.6e-108 yktB S Belongs to the UPF0637 family
PKJOBBIB_01008 7.6e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PKJOBBIB_01009 2.8e-149 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PKJOBBIB_01010 3.6e-120 G alpha-ribazole phosphatase activity
PKJOBBIB_01011 2.1e-154 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PKJOBBIB_01012 7.3e-172 IQ NAD dependent epimerase/dehydratase family
PKJOBBIB_01013 1.6e-137 pnuC H nicotinamide mononucleotide transporter
PKJOBBIB_01014 1.4e-133 dck 2.7.1.74 F deoxynucleoside kinase
PKJOBBIB_01015 1.2e-157 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
PKJOBBIB_01016 0.0 oppA E ABC transporter, substratebinding protein
PKJOBBIB_01017 3.9e-154 T GHKL domain
PKJOBBIB_01018 2.1e-120 T Transcriptional regulatory protein, C terminal
PKJOBBIB_01019 9.2e-167 bcrA V AAA domain, putative AbiEii toxin, Type IV TA system
PKJOBBIB_01020 1.2e-98 S ABC-2 family transporter protein
PKJOBBIB_01021 3.7e-157 K Transcriptional regulator
PKJOBBIB_01022 3.6e-78 yphH S Cupin domain
PKJOBBIB_01023 3.2e-55 yphJ 4.1.1.44 S decarboxylase
PKJOBBIB_01024 7.8e-117 GM NAD(P)H-binding
PKJOBBIB_01025 9.1e-40 cadC1 K helix_turn_helix, Arsenical Resistance Operon Repressor
PKJOBBIB_01026 4.7e-122 gst 2.5.1.18 O Glutathione S-transferase, C-terminal domain
PKJOBBIB_01027 1e-108 K Psort location Cytoplasmic, score
PKJOBBIB_01028 3.3e-120 2.3.1.128 K Acetyltransferase (GNAT) domain
PKJOBBIB_01029 7.4e-88 K Acetyltransferase (GNAT) domain
PKJOBBIB_01030 2.4e-153 S Uncharacterised protein, DegV family COG1307
PKJOBBIB_01031 4.2e-104 desR K helix_turn_helix, Lux Regulon
PKJOBBIB_01032 9.2e-206 desK 2.7.13.3 T Histidine kinase
PKJOBBIB_01033 6.5e-134 yvfS V ABC-2 type transporter
PKJOBBIB_01034 2.6e-158 yvfR V ABC transporter
PKJOBBIB_01035 4.4e-210
PKJOBBIB_01036 4.3e-68 K helix_turn_helix, mercury resistance
PKJOBBIB_01037 6.1e-49 S Protein of unknown function (DUF2568)
PKJOBBIB_01038 0.0 yhgF K Tex-like protein N-terminal domain protein
PKJOBBIB_01040 1.4e-39 L PFAM transposase, IS4 family protein
PKJOBBIB_01041 2.8e-68 L PFAM transposase, IS4 family protein
PKJOBBIB_01042 1.1e-26 L PFAM transposase, IS4 family protein
PKJOBBIB_01044 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01047 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01048 1.6e-09 S FRG
PKJOBBIB_01049 1.4e-172 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01050 6.1e-111 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PKJOBBIB_01051 4.6e-85 ytsP 1.8.4.14 T GAF domain-containing protein
PKJOBBIB_01052 1.5e-276 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PKJOBBIB_01053 3.3e-215 iscS2 2.8.1.7 E Aminotransferase class V
PKJOBBIB_01054 2.3e-226 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PKJOBBIB_01055 4.4e-115 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PKJOBBIB_01056 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PKJOBBIB_01057 3.8e-240 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PKJOBBIB_01058 4.3e-115 S Haloacid dehalogenase-like hydrolase
PKJOBBIB_01059 2e-118 radC L DNA repair protein
PKJOBBIB_01060 1e-179 mreB D cell shape determining protein MreB
PKJOBBIB_01061 7.2e-150 mreC M Involved in formation and maintenance of cell shape
PKJOBBIB_01062 2.3e-85 mreD M rod shape-determining protein MreD
PKJOBBIB_01063 4.4e-115 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PKJOBBIB_01064 2.6e-141 minD D Belongs to the ParA family
PKJOBBIB_01065 1.2e-109 artQ P ABC transporter permease
PKJOBBIB_01066 6.9e-113 glnQ 3.6.3.21 E ABC transporter
PKJOBBIB_01067 2.1e-151 aatB ET ABC transporter substrate-binding protein
PKJOBBIB_01068 1.4e-270 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PKJOBBIB_01069 4.2e-45
PKJOBBIB_01070 9.8e-79 mraZ K Belongs to the MraZ family
PKJOBBIB_01071 3.1e-170 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PKJOBBIB_01072 3.1e-49 ftsL D cell division protein FtsL
PKJOBBIB_01073 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PKJOBBIB_01074 2e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PKJOBBIB_01075 2.4e-264 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PKJOBBIB_01076 3e-201 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PKJOBBIB_01077 6.3e-154 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PKJOBBIB_01078 2.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PKJOBBIB_01079 5.9e-225 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PKJOBBIB_01080 8.7e-78 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PKJOBBIB_01081 2.4e-44 yggT S integral membrane protein
PKJOBBIB_01082 1.7e-145 ylmH S S4 domain protein
PKJOBBIB_01083 8.8e-86 divIVA D DivIVA protein
PKJOBBIB_01084 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PKJOBBIB_01085 6.9e-36 cspA K Cold shock protein
PKJOBBIB_01086 6.7e-154 pstS P Phosphate
PKJOBBIB_01087 4.3e-264 ydiC1 EGP Major facilitator Superfamily
PKJOBBIB_01088 1.8e-210 yaaN P Toxic anion resistance protein (TelA)
PKJOBBIB_01089 4.5e-115 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
PKJOBBIB_01090 5.4e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PKJOBBIB_01091 1.2e-28
PKJOBBIB_01092 4.8e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PKJOBBIB_01093 1.7e-218 iscS 2.8.1.7 E Aminotransferase class V
PKJOBBIB_01094 2.9e-57 XK27_04120 S Putative amino acid metabolism
PKJOBBIB_01095 0.0 uvrA2 L ABC transporter
PKJOBBIB_01096 1.7e-249 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PKJOBBIB_01098 9.9e-123 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
PKJOBBIB_01099 2e-115 S Repeat protein
PKJOBBIB_01100 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PKJOBBIB_01101 1.4e-244 els S Sterol carrier protein domain
PKJOBBIB_01102 3.6e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PKJOBBIB_01103 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PKJOBBIB_01104 2.9e-31 ykzG S Belongs to the UPF0356 family
PKJOBBIB_01105 9.5e-69
PKJOBBIB_01106 1.1e-46
PKJOBBIB_01107 1.2e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PKJOBBIB_01108 5.2e-89 S E1-E2 ATPase
PKJOBBIB_01109 1.5e-211 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PKJOBBIB_01110 6.2e-182 pdhB 1.2.4.1, 1.2.4.4 C Transketolase, C-terminal domain protein
PKJOBBIB_01111 6.3e-267 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PKJOBBIB_01112 2.4e-259 lpdA 1.8.1.4 C Dehydrogenase
PKJOBBIB_01113 2.8e-157 1.1.1.27 C L-malate dehydrogenase activity
PKJOBBIB_01114 2.4e-46 yktA S Belongs to the UPF0223 family
PKJOBBIB_01115 1.3e-145 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PKJOBBIB_01116 0.0 typA T GTP-binding protein TypA
PKJOBBIB_01117 2.6e-211 ftsW D Belongs to the SEDS family
PKJOBBIB_01118 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PKJOBBIB_01119 2.5e-62 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PKJOBBIB_01120 2.2e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PKJOBBIB_01121 1.5e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PKJOBBIB_01122 3.8e-182 ylbL T Belongs to the peptidase S16 family
PKJOBBIB_01123 1.5e-113 comEA L Competence protein ComEA
PKJOBBIB_01124 0.0 comEC S Competence protein ComEC
PKJOBBIB_01125 1e-169 holA 2.7.7.7 L DNA polymerase III delta subunit
PKJOBBIB_01126 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
PKJOBBIB_01127 5.4e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PKJOBBIB_01128 5.3e-50
PKJOBBIB_01129 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PKJOBBIB_01130 2.2e-165 S Tetratricopeptide repeat
PKJOBBIB_01131 2.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PKJOBBIB_01132 9.5e-236 L Transposase
PKJOBBIB_01133 6.2e-68 M Protein of unknown function (DUF3737)
PKJOBBIB_01135 1.1e-119 cobB K Sir2 family
PKJOBBIB_01136 3.3e-26 pcaC 4.1.1.44 S Carboxymuconolactone decarboxylase family
PKJOBBIB_01137 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01138 1.5e-15 pcaC 4.1.1.44 S Carboxymuconolactone decarboxylase family
PKJOBBIB_01139 2.2e-58 rmeD K helix_turn_helix, mercury resistance
PKJOBBIB_01140 2.9e-299 yknV V ABC transporter
PKJOBBIB_01141 7.6e-223 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PKJOBBIB_01142 2.9e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PKJOBBIB_01143 3.1e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
PKJOBBIB_01144 7.8e-48 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PKJOBBIB_01145 1.3e-20
PKJOBBIB_01146 3.2e-259 arpJ P ABC transporter permease
PKJOBBIB_01147 1.8e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PKJOBBIB_01148 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PKJOBBIB_01149 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PKJOBBIB_01150 6.7e-170 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PKJOBBIB_01151 6.6e-131 fruR K DeoR C terminal sensor domain
PKJOBBIB_01152 6.4e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PKJOBBIB_01153 0.0 oatA I Acyltransferase
PKJOBBIB_01154 8.6e-184 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PKJOBBIB_01155 1.7e-142 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PKJOBBIB_01156 8.2e-49 yrvD S Lipopolysaccharide assembly protein A domain
PKJOBBIB_01157 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PKJOBBIB_01158 1e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PKJOBBIB_01159 2.8e-94 M1-874 K Domain of unknown function (DUF1836)
PKJOBBIB_01160 6e-304 cpdB 3.1.3.6, 3.1.4.16 F 5'-nucleotidase, C-terminal domain
PKJOBBIB_01161 1.3e-125
PKJOBBIB_01162 2.5e-18 S Protein of unknown function (DUF2929)
PKJOBBIB_01163 0.0 dnaE 2.7.7.7 L DNA polymerase
PKJOBBIB_01164 7e-178 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PKJOBBIB_01165 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PKJOBBIB_01166 1.5e-72 yeaL S Protein of unknown function (DUF441)
PKJOBBIB_01167 8.4e-162 cvfB S S1 domain
PKJOBBIB_01168 4e-164 xerD D recombinase XerD
PKJOBBIB_01169 2e-67 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PKJOBBIB_01170 1.2e-124 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PKJOBBIB_01171 5.5e-107 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PKJOBBIB_01172 6.7e-136 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PKJOBBIB_01173 2.6e-95 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PKJOBBIB_01174 3.2e-45 fer C 4Fe-4S single cluster domain of Ferredoxin I
PKJOBBIB_01175 1.6e-177 ypbB 5.1.3.1 S Helix-turn-helix domain
PKJOBBIB_01176 5.5e-264 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
PKJOBBIB_01177 6.1e-66 M Lysin motif
PKJOBBIB_01178 2e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PKJOBBIB_01179 1e-224 rpsA 1.17.7.4 J Ribosomal protein S1
PKJOBBIB_01180 2e-244 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PKJOBBIB_01181 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PKJOBBIB_01182 2e-236 S Tetratricopeptide repeat protein
PKJOBBIB_01183 2.6e-147 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PKJOBBIB_01184 7.5e-222 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PKJOBBIB_01185 1.3e-84
PKJOBBIB_01186 0.0 yfmR S ABC transporter, ATP-binding protein
PKJOBBIB_01187 6e-190 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PKJOBBIB_01188 5.7e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PKJOBBIB_01189 7.4e-115 hly S protein, hemolysin III
PKJOBBIB_01190 5e-146 DegV S EDD domain protein, DegV family
PKJOBBIB_01191 6.9e-153 ypmR E GDSL-like Lipase/Acylhydrolase
PKJOBBIB_01192 3e-113 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PKJOBBIB_01193 1.7e-84 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PKJOBBIB_01194 1.1e-39 yozE S Belongs to the UPF0346 family
PKJOBBIB_01195 7.1e-240 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PKJOBBIB_01196 9e-37
PKJOBBIB_01197 8e-78 S Psort location Cytoplasmic, score
PKJOBBIB_01198 8.5e-14
PKJOBBIB_01199 1.7e-37
PKJOBBIB_01200 2.5e-189 gap 1.2.1.12 G Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PKJOBBIB_01201 1.7e-140 K Helix-turn-helix domain
PKJOBBIB_01202 1.5e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PKJOBBIB_01203 1.5e-138 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PKJOBBIB_01204 2.3e-145 dprA LU DNA protecting protein DprA
PKJOBBIB_01205 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PKJOBBIB_01206 1.2e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PKJOBBIB_01207 2.1e-168 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PKJOBBIB_01208 7.2e-92 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PKJOBBIB_01209 2.6e-258 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PKJOBBIB_01210 1.8e-172 lacX 5.1.3.3 G Aldose 1-epimerase
PKJOBBIB_01211 1.1e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PKJOBBIB_01212 9.7e-08
PKJOBBIB_01213 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PKJOBBIB_01214 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PKJOBBIB_01215 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PKJOBBIB_01216 5.6e-171 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PKJOBBIB_01217 3.4e-180 K LysR substrate binding domain
PKJOBBIB_01218 8.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
PKJOBBIB_01219 8.9e-209 xerS L Belongs to the 'phage' integrase family
PKJOBBIB_01220 8.1e-39
PKJOBBIB_01221 0.0 ysaB V FtsX-like permease family
PKJOBBIB_01222 6.3e-137 XK27_05695 V ABC transporter, ATP-binding protein
PKJOBBIB_01223 2.5e-175 T PhoQ Sensor
PKJOBBIB_01224 7.2e-124 T Transcriptional regulatory protein, C terminal
PKJOBBIB_01225 8e-191 EGP Transmembrane secretion effector
PKJOBBIB_01226 1.9e-49 msi198 K Acetyltransferase (GNAT) domain
PKJOBBIB_01227 4.5e-70 K Acetyltransferase (GNAT) domain
PKJOBBIB_01228 3.2e-110 nfnB 1.5.1.34 C Nitroreductase family
PKJOBBIB_01229 8.5e-204 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PKJOBBIB_01230 7.1e-53 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PKJOBBIB_01231 1.5e-58 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PKJOBBIB_01232 2.3e-131 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PKJOBBIB_01233 5.7e-124 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PKJOBBIB_01234 5.2e-113 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PKJOBBIB_01235 1.8e-104 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PKJOBBIB_01236 7.4e-231 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PKJOBBIB_01237 3.4e-112 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PKJOBBIB_01238 4.9e-218 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PKJOBBIB_01239 4.1e-206 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PKJOBBIB_01240 2.3e-99 3.6.1.13 L Belongs to the Nudix hydrolase family
PKJOBBIB_01241 5.9e-160 degV S EDD domain protein, DegV family
PKJOBBIB_01242 0.0 FbpA K Fibronectin-binding protein
PKJOBBIB_01243 4.5e-49 S MazG-like family
PKJOBBIB_01244 3.4e-195 pfoS S Phosphotransferase system, EIIC
PKJOBBIB_01245 2.4e-178 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PKJOBBIB_01246 2.2e-206 bfmBB 2.3.1.168, 2.3.1.61 C 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
PKJOBBIB_01247 4.8e-182 bfmBAB 1.2.4.1, 1.2.4.4 C Transketolase, pyrimidine binding domain
PKJOBBIB_01248 7.3e-186 bfmBAA 1.2.4.4 C Dehydrogenase E1 component
PKJOBBIB_01249 9.8e-261 lpdA 1.8.1.4 C 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
PKJOBBIB_01250 3e-204 buk 2.7.2.7 C Acetokinase family
PKJOBBIB_01251 6.7e-148 pta 2.3.1.19, 2.3.1.8 C Phosphate acetyl/butaryl transferase
PKJOBBIB_01252 8.1e-114 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PKJOBBIB_01253 5.2e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PKJOBBIB_01254 4.9e-154 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PKJOBBIB_01255 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PKJOBBIB_01256 1.3e-209 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PKJOBBIB_01257 2.1e-238 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PKJOBBIB_01258 1.6e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PKJOBBIB_01259 2.6e-236 pyrP F Permease
PKJOBBIB_01260 1.7e-96 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PKJOBBIB_01261 2.9e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PKJOBBIB_01262 4.3e-80 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PKJOBBIB_01263 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PKJOBBIB_01264 1.3e-45 S Family of unknown function (DUF5322)
PKJOBBIB_01265 1.3e-69 rnhA 3.1.26.4 L Ribonuclease HI
PKJOBBIB_01266 5.1e-110 XK27_02070 S Nitroreductase family
PKJOBBIB_01267 2.6e-280 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PKJOBBIB_01268 1.8e-48
PKJOBBIB_01269 7.9e-274 S Mga helix-turn-helix domain
PKJOBBIB_01270 2e-38 nrdH O Glutaredoxin
PKJOBBIB_01271 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PKJOBBIB_01272 2.4e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PKJOBBIB_01273 1.1e-161 K Transcriptional regulator
PKJOBBIB_01274 0.0 pepO 3.4.24.71 O Peptidase family M13
PKJOBBIB_01275 7.4e-194 lplA 6.3.1.20 H Lipoate-protein ligase
PKJOBBIB_01276 3.9e-34
PKJOBBIB_01277 9.5e-172 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PKJOBBIB_01278 7.5e-219 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PKJOBBIB_01279 2.3e-66 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PKJOBBIB_01280 1.1e-106 ypsA S Belongs to the UPF0398 family
PKJOBBIB_01281 8.8e-121 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PKJOBBIB_01282 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PKJOBBIB_01283 4.4e-85 comEB 3.5.4.12 F ComE operon protein 2
PKJOBBIB_01284 2.3e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PKJOBBIB_01285 1.8e-113 dnaD L DnaD domain protein
PKJOBBIB_01286 1.4e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PKJOBBIB_01287 1e-218 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PKJOBBIB_01288 7.1e-86 ypmB S Protein conserved in bacteria
PKJOBBIB_01289 1e-11 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PKJOBBIB_01290 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PKJOBBIB_01291 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PKJOBBIB_01292 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PKJOBBIB_01293 4.2e-167 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PKJOBBIB_01294 1.3e-179 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PKJOBBIB_01295 1.4e-192 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PKJOBBIB_01296 1.2e-263 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PKJOBBIB_01297 9.4e-175
PKJOBBIB_01298 1.3e-142
PKJOBBIB_01299 8.2e-60 yitW S Iron-sulfur cluster assembly protein
PKJOBBIB_01300 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PKJOBBIB_01301 1.8e-150 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PKJOBBIB_01302 1.8e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
PKJOBBIB_01303 3.4e-188 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PKJOBBIB_01304 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PKJOBBIB_01305 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PKJOBBIB_01306 2e-171 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PKJOBBIB_01307 2.9e-07
PKJOBBIB_01308 2e-41
PKJOBBIB_01309 2.3e-53
PKJOBBIB_01310 9.5e-141 recO L Involved in DNA repair and RecF pathway recombination
PKJOBBIB_01311 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PKJOBBIB_01312 8e-64 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PKJOBBIB_01313 3.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PKJOBBIB_01314 2e-82 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PKJOBBIB_01315 5.9e-180 phoH T phosphate starvation-inducible protein PhoH
PKJOBBIB_01317 6.1e-68 yqeY S YqeY-like protein
PKJOBBIB_01318 2.9e-21 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PKJOBBIB_01319 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PKJOBBIB_01320 3.5e-163 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PKJOBBIB_01321 7.4e-169 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PKJOBBIB_01322 1.3e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PKJOBBIB_01323 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PKJOBBIB_01324 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
PKJOBBIB_01325 1.5e-34 XK27_04345 3.6.1.1 C Inorganic pyrophosphatase
PKJOBBIB_01326 1.5e-275
PKJOBBIB_01327 1.3e-154 V ABC transporter
PKJOBBIB_01328 1.8e-83 FG adenosine 5'-monophosphoramidase activity
PKJOBBIB_01329 2e-244 lytH 3.5.1.28, 6.1.1.12 M N-acetylmuramoyl-L-alanine amidase
PKJOBBIB_01330 1.7e-116 3.1.3.18 J HAD-hyrolase-like
PKJOBBIB_01331 4.2e-77 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PKJOBBIB_01332 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PKJOBBIB_01333 1.3e-43
PKJOBBIB_01334 5.9e-132 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PKJOBBIB_01335 3.6e-174 prmA J Ribosomal protein L11 methyltransferase
PKJOBBIB_01336 1.5e-86 XK27_03960 S Protein of unknown function (DUF3013)
PKJOBBIB_01337 7.3e-112 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PKJOBBIB_01338 5.3e-37
PKJOBBIB_01339 3.8e-66 S Protein of unknown function (DUF1093)
PKJOBBIB_01340 8.2e-19
PKJOBBIB_01341 6.1e-48
PKJOBBIB_01342 2.5e-86 XK27_02675 K Acetyltransferase (GNAT) domain
PKJOBBIB_01344 4.3e-109 1.6.5.2 S Flavodoxin-like fold
PKJOBBIB_01345 1.2e-95 K Bacterial regulatory proteins, tetR family
PKJOBBIB_01346 3.8e-153 hutG 3.5.3.8 E N-formylglutamate amidohydrolase
PKJOBBIB_01347 7.9e-54 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
PKJOBBIB_01348 4.5e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PKJOBBIB_01349 5.3e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PKJOBBIB_01350 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PKJOBBIB_01351 1.8e-57
PKJOBBIB_01352 3.2e-83 6.3.3.2 S ASCH
PKJOBBIB_01353 4.9e-24
PKJOBBIB_01354 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PKJOBBIB_01355 2.1e-51 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_01356 1.8e-146 V ABC transporter transmembrane region
PKJOBBIB_01357 1.9e-193 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PKJOBBIB_01358 9.7e-309 dnaK O Heat shock 70 kDa protein
PKJOBBIB_01359 3.4e-98 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PKJOBBIB_01360 3.2e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PKJOBBIB_01361 4.5e-224 hemN H Involved in the biosynthesis of porphyrin-containing compound
PKJOBBIB_01362 2.1e-174 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PKJOBBIB_01363 2e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PKJOBBIB_01364 3.9e-142 terC P Integral membrane protein TerC family
PKJOBBIB_01365 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PKJOBBIB_01366 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PKJOBBIB_01367 6.5e-45 ylxQ J ribosomal protein
PKJOBBIB_01368 1.4e-44 ylxR K Protein of unknown function (DUF448)
PKJOBBIB_01369 6.3e-195 nusA K Participates in both transcription termination and antitermination
PKJOBBIB_01370 1.7e-84 rimP J Required for maturation of 30S ribosomal subunits
PKJOBBIB_01371 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PKJOBBIB_01372 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PKJOBBIB_01373 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PKJOBBIB_01374 1.2e-138 cdsA 2.7.7.41 S Belongs to the CDS family
PKJOBBIB_01375 1.3e-139 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PKJOBBIB_01376 1.8e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PKJOBBIB_01377 5.9e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PKJOBBIB_01378 5.3e-156 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PKJOBBIB_01379 1e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
PKJOBBIB_01380 1.5e-45 yazA L GIY-YIG catalytic domain protein
PKJOBBIB_01381 1.4e-128 yabB 2.1.1.223 L Methyltransferase small domain
PKJOBBIB_01382 2.6e-123 plsC 2.3.1.51 I Acyltransferase
PKJOBBIB_01383 2.9e-217 yfnA E Amino Acid
PKJOBBIB_01384 6.7e-142 yejC S Protein of unknown function (DUF1003)
PKJOBBIB_01385 0.0 mdlB V ABC transporter
PKJOBBIB_01386 0.0 mdlA V ABC transporter
PKJOBBIB_01387 4.8e-29 yneF S UPF0154 protein
PKJOBBIB_01388 4e-37 ynzC S UPF0291 protein
PKJOBBIB_01389 9.4e-20
PKJOBBIB_01390 2.9e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PKJOBBIB_01391 2e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PKJOBBIB_01392 3.2e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PKJOBBIB_01393 2.2e-38 ylqC S Belongs to the UPF0109 family
PKJOBBIB_01394 1e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PKJOBBIB_01395 6.3e-231 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PKJOBBIB_01396 6.4e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PKJOBBIB_01397 8.8e-53
PKJOBBIB_01398 4.1e-181 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PKJOBBIB_01399 0.0 smc D Required for chromosome condensation and partitioning
PKJOBBIB_01400 2.9e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PKJOBBIB_01401 0.0 oppA1 E ABC transporter substrate-binding protein
PKJOBBIB_01402 1.8e-138 oppC EP Binding-protein-dependent transport system inner membrane component
PKJOBBIB_01403 9.2e-170 oppB P ABC transporter permease
PKJOBBIB_01404 1.6e-177 oppF P Belongs to the ABC transporter superfamily
PKJOBBIB_01405 7e-192 oppD P Belongs to the ABC transporter superfamily
PKJOBBIB_01406 3e-37 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PKJOBBIB_01407 2.3e-187 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PKJOBBIB_01408 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PKJOBBIB_01409 2.1e-310 yloV S DAK2 domain fusion protein YloV
PKJOBBIB_01410 2.3e-57 asp S Asp23 family, cell envelope-related function
PKJOBBIB_01411 2.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PKJOBBIB_01412 1.8e-127 thiN 2.7.6.2 H thiamine pyrophosphokinase
PKJOBBIB_01413 1e-116 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PKJOBBIB_01414 7.6e-174 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PKJOBBIB_01415 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PKJOBBIB_01416 9.7e-135 stp 3.1.3.16 T phosphatase
PKJOBBIB_01417 1.4e-253 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PKJOBBIB_01418 5e-176 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PKJOBBIB_01419 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PKJOBBIB_01420 4.4e-214 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PKJOBBIB_01421 1.3e-35 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PKJOBBIB_01422 1.9e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PKJOBBIB_01423 1.6e-91 rssA S Patatin-like phospholipase
PKJOBBIB_01424 1.9e-49
PKJOBBIB_01426 2.4e-311 recN L May be involved in recombinational repair of damaged DNA
PKJOBBIB_01427 4.4e-74 argR K Regulates arginine biosynthesis genes
PKJOBBIB_01428 3.6e-154 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PKJOBBIB_01429 4.6e-149 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PKJOBBIB_01430 1.6e-32 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PKJOBBIB_01431 4.1e-200 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PKJOBBIB_01432 1.6e-149 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PKJOBBIB_01433 1.1e-66 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PKJOBBIB_01434 2.2e-76 yqhY S Asp23 family, cell envelope-related function
PKJOBBIB_01435 1.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PKJOBBIB_01437 2.7e-202 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PKJOBBIB_01438 1.7e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PKJOBBIB_01439 1.1e-56 ysxB J Cysteine protease Prp
PKJOBBIB_01440 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PKJOBBIB_01441 3.2e-11
PKJOBBIB_01442 2.7e-29
PKJOBBIB_01444 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PKJOBBIB_01445 5.4e-261 glnA 6.3.1.2 E glutamine synthetase
PKJOBBIB_01446 1e-60 glnR K Transcriptional regulator
PKJOBBIB_01447 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PKJOBBIB_01448 5.5e-239 ynbB 4.4.1.1 P aluminum resistance
PKJOBBIB_01449 8.6e-173 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PKJOBBIB_01450 1.5e-25 WQ51_02665 S Protein of unknown function (DUF3042)
PKJOBBIB_01451 2.6e-73 yqhL P Rhodanese-like protein
PKJOBBIB_01452 1.8e-178 glk 2.7.1.2 G Glucokinase
PKJOBBIB_01453 6.2e-41 yqgQ S Bacterial protein of unknown function (DUF910)
PKJOBBIB_01454 2.1e-120 gluP 3.4.21.105 S Peptidase, S54 family
PKJOBBIB_01455 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PKJOBBIB_01456 0.0 S Bacterial membrane protein YfhO
PKJOBBIB_01457 2.1e-54 yneR S Belongs to the HesB IscA family
PKJOBBIB_01458 6.9e-116 vraR K helix_turn_helix, Lux Regulon
PKJOBBIB_01459 1.4e-179 vraS 2.7.13.3 T Histidine kinase
PKJOBBIB_01460 3.2e-119 yvqF S Cell wall-active antibiotics response 4TMS YvqF
PKJOBBIB_01461 1e-76 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PKJOBBIB_01462 4.7e-114 udk 2.7.1.48 F Cytidine monophosphokinase
PKJOBBIB_01463 1.5e-206 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PKJOBBIB_01464 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PKJOBBIB_01465 1.3e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PKJOBBIB_01466 6.3e-66 yodB K Transcriptional regulator, HxlR family
PKJOBBIB_01467 7.3e-94 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PKJOBBIB_01468 6.6e-139 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PKJOBBIB_01469 1.9e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PKJOBBIB_01470 6.4e-174 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PKJOBBIB_01471 2.9e-290 arlS 2.7.13.3 T Histidine kinase
PKJOBBIB_01472 7.9e-123 K response regulator
PKJOBBIB_01473 3.7e-268 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PKJOBBIB_01474 1.2e-38 yhcX S Psort location Cytoplasmic, score
PKJOBBIB_01475 1.2e-97 yceD S Uncharacterized ACR, COG1399
PKJOBBIB_01476 1.7e-210 ylbM S Belongs to the UPF0348 family
PKJOBBIB_01477 7.1e-138 yccK Q ubiE/COQ5 methyltransferase family
PKJOBBIB_01478 1.9e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PKJOBBIB_01479 5.6e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PKJOBBIB_01480 1.7e-122 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PKJOBBIB_01481 3.8e-48 yhbY J RNA-binding protein
PKJOBBIB_01482 2.7e-205 yqeH S Ribosome biogenesis GTPase YqeH
PKJOBBIB_01483 2.9e-96 yqeG S HAD phosphatase, family IIIA
PKJOBBIB_01484 4.1e-172 ykcA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PKJOBBIB_01485 1.2e-190 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PKJOBBIB_01486 1.3e-122 mhqD S Dienelactone hydrolase family
PKJOBBIB_01487 4e-181 3.5.1.10 C Alcohol dehydrogenase GroES-like domain
PKJOBBIB_01488 1.2e-97 yvdD 3.2.2.10 S Belongs to the LOG family
PKJOBBIB_01489 8.7e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PKJOBBIB_01490 9e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PKJOBBIB_01491 1.5e-77 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PKJOBBIB_01492 1.1e-127 S SseB protein N-terminal domain
PKJOBBIB_01493 1.6e-53
PKJOBBIB_01494 6.3e-102 yrgI 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
PKJOBBIB_01495 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PKJOBBIB_01497 1.2e-171 dnaI L Primosomal protein DnaI
PKJOBBIB_01498 1.3e-249 dnaB L replication initiation and membrane attachment
PKJOBBIB_01499 1.2e-79 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PKJOBBIB_01500 6.3e-100 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PKJOBBIB_01501 9.9e-160 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PKJOBBIB_01502 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PKJOBBIB_01503 4.2e-119 ybhL S Inhibitor of apoptosis-promoting Bax1
PKJOBBIB_01504 2.2e-251 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PKJOBBIB_01505 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PKJOBBIB_01506 1.1e-115 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PKJOBBIB_01507 1.5e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PKJOBBIB_01509 5.3e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PKJOBBIB_01510 1.5e-146 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PKJOBBIB_01511 4.1e-215 ecsB U ABC transporter
PKJOBBIB_01512 3.1e-133 ecsA V ABC transporter, ATP-binding protein
PKJOBBIB_01513 3.5e-76 hit FG histidine triad
PKJOBBIB_01514 2.7e-61 yhaH S YtxH-like protein
PKJOBBIB_01515 1.5e-158 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PKJOBBIB_01516 1.4e-181 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PKJOBBIB_01517 1e-54 yheA S Control of competence regulator ComK, YlbF/YmcA
PKJOBBIB_01518 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PKJOBBIB_01519 4.7e-154 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PKJOBBIB_01520 5.3e-75 argR K Regulates arginine biosynthesis genes
PKJOBBIB_01521 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PKJOBBIB_01523 1.2e-67
PKJOBBIB_01524 2.3e-21
PKJOBBIB_01525 5.2e-178 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
PKJOBBIB_01526 0.0 glpQ 3.1.4.46 C phosphodiesterase
PKJOBBIB_01527 1.5e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PKJOBBIB_01528 3.2e-68 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PKJOBBIB_01529 2.3e-136 yhfI S Metallo-beta-lactamase superfamily
PKJOBBIB_01530 4.8e-93 traP 1.14.99.57, 6.2.1.3 S heme oxygenase (decyclizing) activity
PKJOBBIB_01531 0.0 V ABC transporter (permease)
PKJOBBIB_01532 3.3e-138 bceA V ABC transporter
PKJOBBIB_01533 5.9e-123 K response regulator
PKJOBBIB_01534 2.6e-208 T PhoQ Sensor
PKJOBBIB_01535 1.9e-109 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PKJOBBIB_01536 0.0 copB 3.6.3.4 P P-type ATPase
PKJOBBIB_01537 7.9e-76 copR K Copper transport repressor CopY TcrY
PKJOBBIB_01538 8e-235 purD 6.3.4.13 F Belongs to the GARS family
PKJOBBIB_01539 5.9e-288 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PKJOBBIB_01540 1.1e-98 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PKJOBBIB_01541 3.1e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PKJOBBIB_01542 2.9e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PKJOBBIB_01543 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PKJOBBIB_01544 7.3e-129 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PKJOBBIB_01545 1.9e-40 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PKJOBBIB_01546 2.6e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PKJOBBIB_01547 6.2e-210 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PKJOBBIB_01548 3.2e-78 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PKJOBBIB_01549 1.8e-102 thiT S Thiamine transporter protein (Thia_YuaJ)
PKJOBBIB_01550 5.9e-258 iolT EGP Major facilitator Superfamily
PKJOBBIB_01551 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PKJOBBIB_01552 2.7e-39 ptsH G phosphocarrier protein HPR
PKJOBBIB_01553 2e-28
PKJOBBIB_01554 0.0 clpE O Belongs to the ClpA ClpB family
PKJOBBIB_01555 2.8e-45 XK27_09445 S Domain of unknown function (DUF1827)
PKJOBBIB_01557 1.3e-306 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PKJOBBIB_01558 8.4e-246 hlyX S Transporter associated domain
PKJOBBIB_01559 2.1e-192 yueF S AI-2E family transporter
PKJOBBIB_01560 6.2e-73 S Acetyltransferase (GNAT) domain
PKJOBBIB_01561 1.8e-95
PKJOBBIB_01562 2.2e-104 ygaC J Belongs to the UPF0374 family
PKJOBBIB_01563 2.3e-142 recX 2.4.1.337 GT4 S Regulatory protein RecX
PKJOBBIB_01564 1.4e-292 frvR K transcriptional antiterminator
PKJOBBIB_01565 2.9e-63
PKJOBBIB_01566 1e-251 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PKJOBBIB_01568 1.8e-78 F Nucleoside 2-deoxyribosyltransferase
PKJOBBIB_01569 1.8e-133 K UTRA
PKJOBBIB_01570 1e-289 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PKJOBBIB_01571 9.4e-253 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PKJOBBIB_01572 6.1e-85
PKJOBBIB_01573 2e-49 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PKJOBBIB_01574 6.9e-50 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PKJOBBIB_01575 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PKJOBBIB_01576 2.2e-218 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PKJOBBIB_01577 1.6e-201 mvaA 1.1.1.34, 1.1.1.88 C Belongs to the HMG-CoA reductase family
PKJOBBIB_01578 1.6e-208 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PKJOBBIB_01579 1.6e-48
PKJOBBIB_01580 1.8e-158 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
PKJOBBIB_01581 3.7e-102 V Restriction endonuclease
PKJOBBIB_01582 2.6e-157 5.1.3.3 G converts alpha-aldose to the beta-anomer
PKJOBBIB_01583 5.2e-212 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PKJOBBIB_01584 1e-102 S ECF transporter, substrate-specific component
PKJOBBIB_01586 7.3e-80 yodP 2.3.1.264 K Acetyltransferase GNAT Family
PKJOBBIB_01587 1.1e-85 ydcK S Belongs to the SprT family
PKJOBBIB_01588 1.9e-130 XK27_08845 S ABC transporter, ATP-binding protein
PKJOBBIB_01589 4.2e-140 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PKJOBBIB_01590 1.7e-155 XK27_08835 S ABC transporter
PKJOBBIB_01591 1.1e-72
PKJOBBIB_01592 0.0 pacL 3.6.3.8 P P-type ATPase
PKJOBBIB_01593 6e-216 V Beta-lactamase
PKJOBBIB_01594 4.8e-151 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PKJOBBIB_01595 1e-218 V Beta-lactamase
PKJOBBIB_01596 2.1e-274 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PKJOBBIB_01597 5e-125 gntR1 K UbiC transcription regulator-associated domain protein
PKJOBBIB_01598 2.6e-219 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PKJOBBIB_01599 1.7e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PKJOBBIB_01600 0.0 yuxL 3.4.19.1 E Prolyl oligopeptidase family
PKJOBBIB_01603 2.8e-159 yjjH S Calcineurin-like phosphoesterase
PKJOBBIB_01604 1.6e-266 dtpT U amino acid peptide transporter
PKJOBBIB_01605 0.0 macB_3 V ABC transporter, ATP-binding protein
PKJOBBIB_01606 1.1e-65
PKJOBBIB_01607 3.4e-76 S function, without similarity to other proteins
PKJOBBIB_01608 1.6e-263 G MFS/sugar transport protein
PKJOBBIB_01609 1.2e-229 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
PKJOBBIB_01610 5.4e-58
PKJOBBIB_01611 0.0 pckG 4.1.1.32, 4.1.1.49 C Phosphoenolpyruvate carboxykinase
PKJOBBIB_01612 4.1e-17 S Virus attachment protein p12 family
PKJOBBIB_01613 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PKJOBBIB_01614 9.4e-70 feoA P FeoA
PKJOBBIB_01615 4.3e-122 E lipolytic protein G-D-S-L family
PKJOBBIB_01618 1.2e-117 ywnB S NAD(P)H-binding
PKJOBBIB_01619 9.9e-62 S MucBP domain
PKJOBBIB_01620 1.2e-62
PKJOBBIB_01622 6.6e-11
PKJOBBIB_01623 4e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
PKJOBBIB_01624 6.4e-69 S COG NOG38524 non supervised orthologous group
PKJOBBIB_01627 1.8e-34
PKJOBBIB_01628 2.3e-224 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PKJOBBIB_01629 1e-303 frvR K Mga helix-turn-helix domain
PKJOBBIB_01630 2e-296 frvR K Mga helix-turn-helix domain
PKJOBBIB_01631 4.5e-265 lysP E amino acid
PKJOBBIB_01633 1.1e-130 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PKJOBBIB_01634 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PKJOBBIB_01635 2e-97
PKJOBBIB_01636 6e-99 2.3.1.128 J Acetyltransferase (GNAT) domain
PKJOBBIB_01637 1.1e-192 S Protein of unknown function C-terminal (DUF3324)
PKJOBBIB_01638 1.2e-87
PKJOBBIB_01639 2e-18 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PKJOBBIB_01640 2.2e-116 sodA 1.15.1.1 C Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PKJOBBIB_01641 2.3e-159 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PKJOBBIB_01642 2.6e-157 I alpha/beta hydrolase fold
PKJOBBIB_01643 3.6e-28
PKJOBBIB_01644 9.3e-74
PKJOBBIB_01645 4.7e-154 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PKJOBBIB_01646 1.9e-124 citR K FCD
PKJOBBIB_01647 1.2e-266 oadA 2.1.3.1, 4.1.1.3, 6.4.1.1, 6.4.1.7 C Conserved carboxylase domain
PKJOBBIB_01648 1.3e-91 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PKJOBBIB_01649 2.3e-287 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PKJOBBIB_01650 9e-156 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PKJOBBIB_01651 1.3e-48 citD C Covalent carrier of the coenzyme of citrate lyase
PKJOBBIB_01652 1e-179 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PKJOBBIB_01654 1.8e-196 oadB 4.1.1.3 C Na+-transporting oxaloacetate decarboxylase beta subunit
PKJOBBIB_01655 6.7e-42 gcdC 2.3.1.12 I Biotin-requiring enzyme
PKJOBBIB_01656 5.9e-52
PKJOBBIB_01657 1.1e-240 citM C Citrate transporter
PKJOBBIB_01658 8.2e-41
PKJOBBIB_01659 4.8e-102 kptA J Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
PKJOBBIB_01660 1.6e-88 K GNAT family
PKJOBBIB_01661 1.2e-106 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PKJOBBIB_01662 2.8e-57 K Transcriptional regulator PadR-like family
PKJOBBIB_01663 4.6e-88 ORF00048
PKJOBBIB_01664 1.1e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PKJOBBIB_01665 3.9e-170 yjjC V ABC transporter
PKJOBBIB_01666 7.2e-292 M Exporter of polyketide antibiotics
PKJOBBIB_01667 9.6e-115 K Transcriptional regulator
PKJOBBIB_01668 1.7e-257 EGP Major facilitator Superfamily
PKJOBBIB_01669 1.6e-126 S membrane transporter protein
PKJOBBIB_01670 2.1e-180 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_01671 7.9e-157 S Alpha beta hydrolase
PKJOBBIB_01672 5.2e-60 yvoA_1 K Transcriptional regulator, GntR family
PKJOBBIB_01673 1.8e-125 skfE V ATPases associated with a variety of cellular activities
PKJOBBIB_01674 2.5e-21
PKJOBBIB_01675 1.6e-102 ydaF J Acetyltransferase (GNAT) domain
PKJOBBIB_01676 7.1e-161 oppF P Oligopeptide/dipeptide transporter, C-terminal region
PKJOBBIB_01677 1.3e-199 oppD P Oligopeptide/dipeptide transporter, C-terminal region
PKJOBBIB_01678 8.5e-24
PKJOBBIB_01679 2.2e-174 amiD EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PKJOBBIB_01680 1.6e-166 oppB P Binding-protein-dependent transport system inner membrane component
PKJOBBIB_01681 5.9e-289 E Bacterial extracellular solute-binding proteins, family 5 Middle
PKJOBBIB_01682 4.7e-128 hchA S DJ-1/PfpI family
PKJOBBIB_01683 4.6e-52 K Transcriptional
PKJOBBIB_01684 3.7e-36
PKJOBBIB_01685 1.1e-260 V ABC transporter transmembrane region
PKJOBBIB_01686 4.9e-285 V ABC transporter transmembrane region
PKJOBBIB_01688 7.2e-68 S Iron-sulphur cluster biosynthesis
PKJOBBIB_01689 2.3e-60 2.7.1.39 S Phosphotransferase enzyme family
PKJOBBIB_01690 8e-23 WQ51_00220 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_01692 9.1e-255 lytN 3.5.1.104 M LysM domain
PKJOBBIB_01693 1.9e-133 zmp3 O Zinc-dependent metalloprotease
PKJOBBIB_01694 1.1e-128 repA K DeoR C terminal sensor domain
PKJOBBIB_01696 1e-48 lciIC K Helix-turn-helix XRE-family like proteins
PKJOBBIB_01697 4.1e-14 yjdB S Domain of unknown function (DUF4767)
PKJOBBIB_01698 1.5e-55 yjdB S Domain of unknown function (DUF4767)
PKJOBBIB_01699 2.3e-44 KLT Protein tyrosine kinase
PKJOBBIB_01700 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01703 6.5e-37 L L COG5421 Transposase
PKJOBBIB_01705 4.9e-21 L Reverse transcriptase (RNA-dependent DNA polymerase)
PKJOBBIB_01706 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01707 7.7e-22 L Reverse transcriptase (RNA-dependent DNA polymerase)
PKJOBBIB_01708 1.6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PKJOBBIB_01709 1.5e-177 coaA 2.7.1.33 F Pantothenic acid kinase
PKJOBBIB_01710 3.5e-13
PKJOBBIB_01711 1.6e-24
PKJOBBIB_01712 7.4e-277 pipD E Dipeptidase
PKJOBBIB_01713 3.8e-84 ykhA 3.1.2.20 I Thioesterase superfamily
PKJOBBIB_01714 0.0 helD 3.6.4.12 L DNA helicase
PKJOBBIB_01715 1.9e-21
PKJOBBIB_01716 0.0 yjbQ P TrkA C-terminal domain protein
PKJOBBIB_01717 1.6e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PKJOBBIB_01718 2.2e-81 yjhE S Phage tail protein
PKJOBBIB_01719 3.1e-240 mntH P H( )-stimulated, divalent metal cation uptake system
PKJOBBIB_01720 4.4e-188 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PKJOBBIB_01721 3.5e-128 pgm3 G Phosphoglycerate mutase family
PKJOBBIB_01722 0.0 V FtsX-like permease family
PKJOBBIB_01723 2.6e-135 cysA V ABC transporter, ATP-binding protein
PKJOBBIB_01724 0.0 E amino acid
PKJOBBIB_01725 3.4e-163 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
PKJOBBIB_01726 2.1e-238 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PKJOBBIB_01727 8.7e-147 nodB3 G Polysaccharide deacetylase
PKJOBBIB_01728 0.0 M Sulfatase
PKJOBBIB_01729 5.7e-173 S EpsG family
PKJOBBIB_01730 1.6e-77 epsG 2.7.10.1 D Capsular exopolysaccharide family
PKJOBBIB_01731 2.2e-93 ywqC M capsule polysaccharide biosynthetic process
PKJOBBIB_01732 7.9e-242 S polysaccharide biosynthetic process
PKJOBBIB_01733 2.2e-194 M Glycosyl transferases group 1
PKJOBBIB_01734 1.7e-102 tagF 2.7.8.12 M Glycosyl transferase, family 2
PKJOBBIB_01735 4.5e-71 S Psort location CytoplasmicMembrane, score
PKJOBBIB_01736 3.5e-236 S Bacterial membrane protein, YfhO
PKJOBBIB_01737 1.7e-293 M Glycosyl hydrolases family 25
PKJOBBIB_01738 4.6e-176 M Dolichyl-phosphate-mannose-protein mannosyltransferase
PKJOBBIB_01739 7e-115 icaC M Acyltransferase family
PKJOBBIB_01740 4.9e-158 ykoT GT2 M Glycosyl transferase family 2
PKJOBBIB_01741 6.1e-197 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PKJOBBIB_01742 2.9e-90
PKJOBBIB_01743 8.8e-246 wcaJ M Bacterial sugar transferase
PKJOBBIB_01744 4.3e-127 M Glycosyltransferase sugar-binding region containing DXD motif
PKJOBBIB_01745 1.9e-106 tuaG GT2 M Glycosyltransferase like family 2
PKJOBBIB_01746 1.6e-174 cps2D 5.1.3.2 M RmlD substrate binding domain
PKJOBBIB_01747 7.4e-110 glnP P ABC transporter permease
PKJOBBIB_01748 4.6e-109 gluC P ABC transporter permease
PKJOBBIB_01749 3.8e-148 glnH ET ABC transporter substrate-binding protein
PKJOBBIB_01750 7.4e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PKJOBBIB_01751 4.8e-166
PKJOBBIB_01753 6.1e-84 zur P Belongs to the Fur family
PKJOBBIB_01754 2.2e-09
PKJOBBIB_01755 1e-110 gmk2 2.7.4.8 F Guanylate kinase
PKJOBBIB_01756 2.3e-69 GnaT 2.5.1.16 K Acetyltransferase (GNAT) domain
PKJOBBIB_01757 3.3e-124 spl M NlpC/P60 family
PKJOBBIB_01758 1.2e-244 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PKJOBBIB_01759 3.3e-172 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PKJOBBIB_01760 1e-54 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
PKJOBBIB_01761 4.6e-174 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PKJOBBIB_01762 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PKJOBBIB_01763 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PKJOBBIB_01764 8.9e-286 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PKJOBBIB_01765 9.4e-201 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PKJOBBIB_01766 3.6e-197 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PKJOBBIB_01767 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PKJOBBIB_01768 4.7e-204 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PKJOBBIB_01769 1.3e-101 ylcC 3.4.22.70 M Sortase family
PKJOBBIB_01770 1.4e-145 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PKJOBBIB_01771 0.0 fbp 3.1.3.11 G phosphatase activity
PKJOBBIB_01772 9.7e-65 nrp 1.20.4.1 P ArsC family
PKJOBBIB_01773 0.0 clpL O associated with various cellular activities
PKJOBBIB_01774 3.2e-158 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PKJOBBIB_01775 1.1e-202 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PKJOBBIB_01776 3.3e-106 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PKJOBBIB_01777 1.9e-161 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PKJOBBIB_01778 1.1e-144 ywqE 3.1.3.48 GM PHP domain protein
PKJOBBIB_01779 4.6e-147 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PKJOBBIB_01780 1.7e-29 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PKJOBBIB_01781 1.1e-158 L Transposase DDE domain
PKJOBBIB_01782 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01783 7.9e-97 L Transposase DDE domain
PKJOBBIB_01784 1.5e-197 L Transposase
PKJOBBIB_01785 5.9e-75 cpsE M Bacterial sugar transferase
PKJOBBIB_01786 5.5e-27 V Glycosyl transferase, family 2
PKJOBBIB_01787 4.1e-61 sacB GT2,GT4 M Stealth protein CR2, conserved region 2
PKJOBBIB_01788 7.3e-30 rfbF GT2 V Glycosyl transferase, family 2
PKJOBBIB_01789 3.5e-102 cps2I S Psort location CytoplasmicMembrane, score
PKJOBBIB_01790 2e-51 cps1B GT2,GT4 M Glycosyl transferases group 1
PKJOBBIB_01792 4.9e-42 wbbK M Glycosyl transferases group 1
PKJOBBIB_01793 8.8e-38 wbbL M PFAM Glycosyl transferase family 2
PKJOBBIB_01794 1.2e-105 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PKJOBBIB_01795 3.6e-115 epsB M biosynthesis protein
PKJOBBIB_01796 6.3e-131 E lipolytic protein G-D-S-L family
PKJOBBIB_01797 3.2e-81 ccl S QueT transporter
PKJOBBIB_01798 3.3e-124 IQ Enoyl-(Acyl carrier protein) reductase
PKJOBBIB_01799 1.8e-36 XK27_01315 S Protein of unknown function (DUF2829)
PKJOBBIB_01800 1.9e-47 K sequence-specific DNA binding
PKJOBBIB_01801 1.9e-115 gpm5 3.1.3.3, 5.4.2.11 G Phosphoglycerate mutase family
PKJOBBIB_01802 6.5e-179 oppF P Belongs to the ABC transporter superfamily
PKJOBBIB_01803 1.1e-197 oppD P Belongs to the ABC transporter superfamily
PKJOBBIB_01804 2.5e-178 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PKJOBBIB_01805 8e-163 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PKJOBBIB_01806 3.4e-302 oppA E ABC transporter, substratebinding protein
PKJOBBIB_01807 2.9e-76 EGP Major facilitator Superfamily
PKJOBBIB_01808 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01809 1.7e-30 EGP Major facilitator Superfamily
PKJOBBIB_01810 4.9e-113 EGP Major facilitator Superfamily
PKJOBBIB_01811 1.3e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PKJOBBIB_01812 4.7e-131 yrjD S LUD domain
PKJOBBIB_01813 2.2e-287 lutB C 4Fe-4S dicluster domain
PKJOBBIB_01814 3.6e-148 lutA C Cysteine-rich domain
PKJOBBIB_01815 4.5e-84
PKJOBBIB_01816 3.3e-50 chbA 2.7.1.196, 2.7.1.205 G Phosphotransferase system cellobiose-specific component IIA
PKJOBBIB_01817 7.2e-211 S Bacterial protein of unknown function (DUF871)
PKJOBBIB_01818 1.9e-33 S Domain of unknown function (DUF3284)
PKJOBBIB_01819 3.7e-07
PKJOBBIB_01820 2.8e-263 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PKJOBBIB_01821 0.0 rafA 3.2.1.22 G alpha-galactosidase
PKJOBBIB_01822 3.3e-135 S Belongs to the UPF0246 family
PKJOBBIB_01823 4.7e-137 XK27_05520 S Uncharacterized protein conserved in bacteria (DUF2087)
PKJOBBIB_01824 0.0 VPA1266 3.1.11.5 L Helix-hairpin-helix containing domain
PKJOBBIB_01825 2.4e-80
PKJOBBIB_01826 8.6e-57 S WxL domain surface cell wall-binding
PKJOBBIB_01827 1.7e-145 frlD 2.7.1.218 G pfkB family carbohydrate kinase
PKJOBBIB_01828 2.1e-103 apc3 3.5.2.9 EQ Hydantoinase/oxoprolinase N-terminal region
PKJOBBIB_01829 3.9e-137
PKJOBBIB_01830 1.4e-51 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PKJOBBIB_01831 1.1e-46 3.1.21.3 V Type I restriction modification DNA specificity domain
PKJOBBIB_01832 7.5e-64
PKJOBBIB_01833 7e-212 ykiI
PKJOBBIB_01834 0.0 scrA 2.7.1.211 G phosphotransferase system
PKJOBBIB_01835 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PKJOBBIB_01836 4.9e-182 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PKJOBBIB_01837 1.1e-302 scrB 3.2.1.26 GH32 G invertase
PKJOBBIB_01838 1.7e-162 azoB GM NmrA-like family
PKJOBBIB_01839 8.5e-234 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PKJOBBIB_01840 7.7e-143 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PKJOBBIB_01841 6.2e-151 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PKJOBBIB_01842 1e-257 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PKJOBBIB_01843 3.9e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PKJOBBIB_01844 1.7e-62 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PKJOBBIB_01845 7e-223 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PKJOBBIB_01846 4.7e-126 IQ reductase
PKJOBBIB_01847 1.2e-161 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PKJOBBIB_01848 8.2e-174 fabK 1.3.1.9 S Nitronate monooxygenase
PKJOBBIB_01849 1.2e-33 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PKJOBBIB_01850 1.7e-176 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PKJOBBIB_01851 2.3e-75 marR K Winged helix DNA-binding domain
PKJOBBIB_01852 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PKJOBBIB_01853 1.2e-157 bioH 2.1.1.197, 3.1.1.85, 3.7.1.13, 3.7.1.9, 4.2.99.20 E Alpha/beta hydrolase family
PKJOBBIB_01854 6.6e-226 bdhA C Iron-containing alcohol dehydrogenase
PKJOBBIB_01855 6.8e-47 S Uncharacterized protein conserved in bacteria (DUF2316)
PKJOBBIB_01856 5.4e-66 K MarR family
PKJOBBIB_01857 1.3e-12 S response to antibiotic
PKJOBBIB_01858 2.1e-164 S Putative esterase
PKJOBBIB_01859 1.1e-195
PKJOBBIB_01860 2.4e-104 rmaB K Transcriptional regulator, MarR family
PKJOBBIB_01861 0.0 lmrA 3.6.3.44 V ABC transporter
PKJOBBIB_01862 3.8e-84 F NUDIX domain
PKJOBBIB_01863 2.5e-129 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PKJOBBIB_01864 3.4e-21
PKJOBBIB_01865 1.1e-118 S zinc-ribbon domain
PKJOBBIB_01866 6.5e-204 pbpX1 V Beta-lactamase
PKJOBBIB_01867 7.1e-187 K AI-2E family transporter
PKJOBBIB_01868 1.3e-128 srtA 3.4.22.70 M Sortase family
PKJOBBIB_01869 2.2e-64 gtcA S Teichoic acid glycosylation protein
PKJOBBIB_01870 2.6e-169 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PKJOBBIB_01871 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PKJOBBIB_01872 4e-167 gbuC E glycine betaine
PKJOBBIB_01873 1.1e-147 proW E glycine betaine
PKJOBBIB_01874 1e-221 gbuA 3.6.3.32 E glycine betaine
PKJOBBIB_01875 7.8e-137 sfsA S Belongs to the SfsA family
PKJOBBIB_01876 1.8e-67 usp1 T Universal stress protein family
PKJOBBIB_01877 1.5e-252 yxbA 6.3.1.12 S ATP-grasp enzyme
PKJOBBIB_01878 4.8e-133 thrB 2.7.1.39, 4.2.3.1 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PKJOBBIB_01879 7.2e-286 thrC 4.2.3.1 E Threonine synthase
PKJOBBIB_01880 4.1e-228 hom 1.1.1.3 E homoserine dehydrogenase
PKJOBBIB_01881 2.5e-250 yclM 2.7.2.4 E Belongs to the aspartokinase family
PKJOBBIB_01882 2e-166 yqiK S SPFH domain / Band 7 family
PKJOBBIB_01883 8.7e-39
PKJOBBIB_01884 2.5e-173 pfoS S Phosphotransferase system, EIIC
PKJOBBIB_01885 2.3e-176 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PKJOBBIB_01886 2.7e-216 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PKJOBBIB_01887 1.4e-50
PKJOBBIB_01888 5.4e-127 WQ51_05710 S Mitochondrial biogenesis AIM24
PKJOBBIB_01889 3.6e-69 FG Scavenger mRNA decapping enzyme C-term binding
PKJOBBIB_01890 0.0 asnB 6.3.5.4 E Asparagine synthase
PKJOBBIB_01891 8.6e-201 S Calcineurin-like phosphoesterase
PKJOBBIB_01892 5.3e-159 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PKJOBBIB_01893 2.5e-175 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PKJOBBIB_01894 2.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PKJOBBIB_01895 1.7e-165 natA S abc transporter atp-binding protein
PKJOBBIB_01896 1.3e-219 ysdA CP ABC-2 family transporter protein
PKJOBBIB_01897 2.4e-63 K helix_turn_helix gluconate operon transcriptional repressor
PKJOBBIB_01898 8.9e-164 CcmA V ABC transporter
PKJOBBIB_01899 1.2e-109 I ABC-2 family transporter protein
PKJOBBIB_01900 8.9e-147 IQ reductase
PKJOBBIB_01901 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01902 3.1e-201 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PKJOBBIB_01903 6.3e-185 tdcB 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PKJOBBIB_01904 3e-297 S OPT oligopeptide transporter protein
PKJOBBIB_01905 5.3e-62 S Coenzyme PQQ synthesis protein D (PqqD)
PKJOBBIB_01906 5.9e-282 pipD E Dipeptidase
PKJOBBIB_01907 1.3e-254 gor 1.8.1.7 C Glutathione reductase
PKJOBBIB_01908 1.1e-248 lmrB EGP Major facilitator Superfamily
PKJOBBIB_01909 6.1e-97 yxaF K Bacterial regulatory proteins, tetR family
PKJOBBIB_01910 1.2e-293 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PKJOBBIB_01911 0.0 bglP 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PKJOBBIB_01912 2.8e-154 licT K CAT RNA binding domain
PKJOBBIB_01913 3e-290 cydC V ABC transporter transmembrane region
PKJOBBIB_01914 0.0 cydD CO ABC transporter transmembrane region
PKJOBBIB_01915 1.4e-74 S NusG domain II
PKJOBBIB_01916 7.4e-155 M Peptidoglycan-binding domain 1 protein
PKJOBBIB_01917 7.1e-101
PKJOBBIB_01918 1.4e-124 ywhK S Membrane
PKJOBBIB_01919 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01920 9.3e-84 ywhK S Membrane
PKJOBBIB_01921 1.1e-62 S Protein of unknown function (DUF1093)
PKJOBBIB_01922 4.2e-50 yvlA
PKJOBBIB_01923 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PKJOBBIB_01924 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PKJOBBIB_01925 1.3e-182 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PKJOBBIB_01926 6.8e-278 cydA 1.10.3.14 C ubiquinol oxidase
PKJOBBIB_01927 9.1e-237 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
PKJOBBIB_01928 2e-191 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PKJOBBIB_01929 8.6e-40
PKJOBBIB_01930 1.4e-86
PKJOBBIB_01931 8e-24
PKJOBBIB_01932 7e-167 yicL EG EamA-like transporter family
PKJOBBIB_01933 1.5e-112 tag 3.2.2.20 L glycosylase
PKJOBBIB_01934 5e-78 usp5 T universal stress protein
PKJOBBIB_01935 1.8e-55 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_01936 6.4e-145 ptp3 3.1.3.48 T Tyrosine phosphatase family
PKJOBBIB_01937 2.2e-226 queG 1.17.99.6 C Domain of unknown function (DUF1730)
PKJOBBIB_01938 1.7e-63
PKJOBBIB_01939 1.3e-85 bioY S BioY family
PKJOBBIB_01940 3.5e-70 adhR K helix_turn_helix, mercury resistance
PKJOBBIB_01941 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01942 8.8e-81 C Flavodoxin
PKJOBBIB_01943 1.2e-196 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PKJOBBIB_01944 8.3e-114 GM NmrA-like family
PKJOBBIB_01946 4e-101 Q methyltransferase
PKJOBBIB_01947 3.4e-93 T Sh3 type 3 domain protein
PKJOBBIB_01948 6.9e-118 yfeJ 6.3.5.2 F glutamine amidotransferase
PKJOBBIB_01949 1.3e-134 S Uncharacterized protein conserved in bacteria (DUF2263)
PKJOBBIB_01950 5.3e-259 yhdP S Transporter associated domain
PKJOBBIB_01951 2.7e-258 lmrB EGP Major facilitator Superfamily
PKJOBBIB_01952 1.6e-61 S Domain of unknown function (DUF4811)
PKJOBBIB_01953 3.5e-45 maf D nucleoside-triphosphate diphosphatase activity
PKJOBBIB_01954 1.6e-44 maf D nucleoside-triphosphate diphosphatase activity
PKJOBBIB_01955 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PKJOBBIB_01956 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PKJOBBIB_01957 0.0 ydaO E amino acid
PKJOBBIB_01958 2.4e-56 S Domain of unknown function (DUF1827)
PKJOBBIB_01959 2.9e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PKJOBBIB_01960 6.7e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PKJOBBIB_01961 5.5e-110 S CAAX protease self-immunity
PKJOBBIB_01962 8.2e-196 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PKJOBBIB_01963 3.4e-186
PKJOBBIB_01964 7.4e-158 ytrB V ABC transporter
PKJOBBIB_01965 1.3e-60 ytrA K helix_turn_helix gluconate operon transcriptional repressor
PKJOBBIB_01966 7.2e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PKJOBBIB_01967 0.0 uup S ABC transporter, ATP-binding protein
PKJOBBIB_01968 3.9e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PKJOBBIB_01969 4.2e-189 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PKJOBBIB_01970 2.1e-99 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PKJOBBIB_01971 5.3e-130 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PKJOBBIB_01972 3.5e-74
PKJOBBIB_01973 3.3e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
PKJOBBIB_01974 2e-180 ansA 3.5.1.1 EJ Asparaginase
PKJOBBIB_01975 3.9e-144 fat 3.1.2.21 I Acyl-ACP thioesterase
PKJOBBIB_01976 2.2e-143 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PKJOBBIB_01977 2.2e-57 yabA L Involved in initiation control of chromosome replication
PKJOBBIB_01978 1.7e-171 holB 2.7.7.7 L DNA polymerase III
PKJOBBIB_01979 4.6e-52 yaaQ S Cyclic-di-AMP receptor
PKJOBBIB_01980 5.1e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PKJOBBIB_01981 1e-33 S Protein of unknown function (DUF2508)
PKJOBBIB_01982 1.3e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PKJOBBIB_01983 8.4e-32 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PKJOBBIB_01984 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PKJOBBIB_01985 3.8e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PKJOBBIB_01986 5.6e-50
PKJOBBIB_01987 1.4e-107 rsmC 2.1.1.172 J Methyltransferase
PKJOBBIB_01988 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PKJOBBIB_01989 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_01990 1.8e-45
PKJOBBIB_01991 2.2e-176 ccpB 5.1.1.1 K lacI family
PKJOBBIB_01992 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
PKJOBBIB_01993 8.3e-157 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PKJOBBIB_01994 1.5e-211 M Glycosyl hydrolases family 25
PKJOBBIB_01995 5.2e-45 hol S Bacteriophage holin
PKJOBBIB_01996 3.4e-53
PKJOBBIB_01997 2.8e-13
PKJOBBIB_01998 0.0 S cellulase activity
PKJOBBIB_01999 9.1e-228 S Phage tail protein
PKJOBBIB_02000 8.9e-275 S phage tail tape measure protein
PKJOBBIB_02001 6.8e-54
PKJOBBIB_02002 6.2e-49 S Phage tail assembly chaperone protein, TAC
PKJOBBIB_02003 1.4e-99 S Phage tail tube protein
PKJOBBIB_02004 8.6e-69 S Protein of unknown function (DUF3168)
PKJOBBIB_02005 3.1e-57 S Bacteriophage HK97-gp10, putative tail-component
PKJOBBIB_02006 2.3e-50
PKJOBBIB_02007 2.1e-61 S Phage gp6-like head-tail connector protein
PKJOBBIB_02008 3.9e-175
PKJOBBIB_02009 3.8e-25
PKJOBBIB_02010 5.2e-187 S Phage major capsid protein E
PKJOBBIB_02011 3.4e-49
PKJOBBIB_02012 4e-73 S Domain of unknown function (DUF4355)
PKJOBBIB_02013 1.2e-16
PKJOBBIB_02016 5.6e-178 S head morphogenesis protein, SPP1 gp7 family
PKJOBBIB_02017 1e-257 S Phage portal protein
PKJOBBIB_02018 6.5e-248 S Terminase-like family
PKJOBBIB_02019 4.7e-43 L transposase activity
PKJOBBIB_02021 4.9e-218 S GcrA cell cycle regulator
PKJOBBIB_02023 5.1e-12
PKJOBBIB_02025 1.2e-76
PKJOBBIB_02027 3.6e-17
PKJOBBIB_02029 7.4e-28 S Protein of unknown function (DUF1642)
PKJOBBIB_02031 1.2e-18
PKJOBBIB_02032 1.4e-90 L Belongs to the 'phage' integrase family
PKJOBBIB_02033 2.4e-122 S DNA methylation
PKJOBBIB_02034 8.2e-15
PKJOBBIB_02035 4.6e-56 S Protein of unknown function (DUF1064)
PKJOBBIB_02036 3e-70
PKJOBBIB_02038 5.5e-86 dnaC L IstB-like ATP binding protein
PKJOBBIB_02039 3.6e-18 L DnaD domain protein
PKJOBBIB_02040 3.6e-49 S Protein of unknown function (DUF669)
PKJOBBIB_02041 7.3e-81 S AAA domain
PKJOBBIB_02042 5.8e-16 S DNA protection
PKJOBBIB_02045 6.6e-15
PKJOBBIB_02049 5.5e-08 ropB K sequence-specific DNA binding
PKJOBBIB_02050 2.3e-25 K Cro/C1-type HTH DNA-binding domain
PKJOBBIB_02051 5.1e-14 E IrrE N-terminal-like domain
PKJOBBIB_02052 4.6e-35
PKJOBBIB_02053 6.4e-65 S Domain of unknown function (DUF5067)
PKJOBBIB_02055 2e-60 S Pyridoxamine 5'-phosphate oxidase
PKJOBBIB_02056 1.5e-29
PKJOBBIB_02057 1.6e-60 S AAA domain
PKJOBBIB_02060 1.4e-103 L Belongs to the 'phage' integrase family
PKJOBBIB_02061 1.1e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PKJOBBIB_02062 6.5e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PKJOBBIB_02063 3e-221 mdtG EGP Major facilitator Superfamily
PKJOBBIB_02064 7.1e-65 K acetyltransferase
PKJOBBIB_02065 5.2e-72 K acetyltransferase
PKJOBBIB_02066 2.1e-67
PKJOBBIB_02067 2.3e-218 yceI G Sugar (and other) transporter
PKJOBBIB_02068 8.6e-262 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PKJOBBIB_02069 1.3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PKJOBBIB_02070 8.2e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PKJOBBIB_02071 0.0 mgtA 3.6.3.2, 3.6.3.6 P COG0474 Cation transport ATPase
PKJOBBIB_02072 1.3e-268 nylA 3.5.1.4 J Belongs to the amidase family
PKJOBBIB_02073 2.1e-66 frataxin S Domain of unknown function (DU1801)
PKJOBBIB_02074 1.2e-94 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S Cobalamin adenosyltransferase
PKJOBBIB_02075 4e-96 S ECF transporter, substrate-specific component
PKJOBBIB_02076 1.1e-62 S Domain of unknown function (DUF4430)
PKJOBBIB_02077 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
PKJOBBIB_02078 5e-78 F Nucleoside 2-deoxyribosyltransferase
PKJOBBIB_02079 1.7e-159 S Alpha/beta hydrolase of unknown function (DUF915)
PKJOBBIB_02080 3.4e-100 nusG K Participates in transcription elongation, termination and antitermination
PKJOBBIB_02081 5.7e-22 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PKJOBBIB_02082 5.7e-172 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PKJOBBIB_02083 3.8e-168 menA 2.5.1.74 M UbiA prenyltransferase family
PKJOBBIB_02084 1.2e-197 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PKJOBBIB_02085 2.6e-137 cad S FMN_bind
PKJOBBIB_02086 0.0 ndh 1.6.99.3 C NADH dehydrogenase
PKJOBBIB_02087 3.1e-80 ynhH S NusG domain II
PKJOBBIB_02088 1.2e-98 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
PKJOBBIB_02089 1.9e-178 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PKJOBBIB_02092 1.3e-122 1.5.1.40 S Rossmann-like domain
PKJOBBIB_02093 2.6e-189 XK27_00915 C Luciferase-like monooxygenase
PKJOBBIB_02095 2.4e-98 yacP S YacP-like NYN domain
PKJOBBIB_02096 1.2e-140 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PKJOBBIB_02097 8.5e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PKJOBBIB_02098 4.5e-274 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PKJOBBIB_02099 1.9e-261 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
PKJOBBIB_02100 9.8e-155 L 4.5 Transposon and IS
PKJOBBIB_02101 8.6e-136 L Helix-turn-helix domain
PKJOBBIB_02102 3.9e-167 L hmm pf00665
PKJOBBIB_02103 4.6e-46 L 4.5 Transposon and IS
PKJOBBIB_02104 6.2e-108
PKJOBBIB_02106 6.2e-274 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PKJOBBIB_02107 4.6e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PKJOBBIB_02108 9.7e-118 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PKJOBBIB_02109 9.1e-142 K SIS domain
PKJOBBIB_02110 6.9e-113 yhfC S Putative membrane peptidase family (DUF2324)
PKJOBBIB_02111 2.7e-172 S Membrane
PKJOBBIB_02112 2.3e-60 K helix_turn_helix gluconate operon transcriptional repressor
PKJOBBIB_02113 1.6e-217 inlJ M MucBP domain
PKJOBBIB_02114 4.7e-132 S ABC-2 family transporter protein
PKJOBBIB_02115 1.1e-50 V ABC transporter, ATP-binding protein
PKJOBBIB_02116 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02117 4.4e-89 V ABC transporter, ATP-binding protein
PKJOBBIB_02118 1.8e-201 yacL S domain protein
PKJOBBIB_02119 6.5e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PKJOBBIB_02120 4.3e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTPase
PKJOBBIB_02121 9.9e-51 HA62_12640 S GCN5-related N-acetyl-transferase
PKJOBBIB_02122 9.5e-70 S Protein of unknown function (DUF805)
PKJOBBIB_02123 3.6e-257 pepC 3.4.22.40 E aminopeptidase
PKJOBBIB_02124 9.3e-261 pepC 3.4.22.40 E Peptidase C1-like family
PKJOBBIB_02125 3.1e-198
PKJOBBIB_02126 2.3e-218 S ABC-2 family transporter protein
PKJOBBIB_02127 6.7e-167 V ATPases associated with a variety of cellular activities
PKJOBBIB_02128 0.0 kup P Transport of potassium into the cell
PKJOBBIB_02129 0.0 ppdK 2.7.9.1 G Belongs to the PEP-utilizing enzyme family
PKJOBBIB_02130 3.1e-93 ccpN K Domain in cystathionine beta-synthase and other proteins.
PKJOBBIB_02131 7.7e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PKJOBBIB_02132 1.1e-206 ltrA S Bacterial low temperature requirement A protein (LtrA)
PKJOBBIB_02133 1.6e-45
PKJOBBIB_02134 4.9e-207 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PKJOBBIB_02135 1e-09 yhjA K CsbD-like
PKJOBBIB_02136 1.2e-230 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PKJOBBIB_02137 6.9e-215 EGP Major facilitator Superfamily
PKJOBBIB_02138 3.1e-141 udp 2.4.2.3, 3.2.2.4 F Phosphorylase superfamily
PKJOBBIB_02139 2.7e-211 EGP Major facilitator Superfamily
PKJOBBIB_02140 6e-191 KT Purine catabolism regulatory protein-like family
PKJOBBIB_02141 7e-08
PKJOBBIB_02142 1.9e-32
PKJOBBIB_02143 1.3e-38
PKJOBBIB_02144 3.7e-224 pimH EGP Major facilitator Superfamily
PKJOBBIB_02145 4.1e-202 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PKJOBBIB_02146 3.8e-148 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PKJOBBIB_02148 1.8e-42
PKJOBBIB_02149 1.8e-231 ywhK S Membrane
PKJOBBIB_02150 4.2e-147 3.4.22.70 M Sortase family
PKJOBBIB_02151 1.2e-299 M Cna protein B-type domain
PKJOBBIB_02152 2.2e-238
PKJOBBIB_02153 0.0 M domain protein
PKJOBBIB_02154 5.6e-103
PKJOBBIB_02155 4e-231 N Uncharacterized conserved protein (DUF2075)
PKJOBBIB_02156 1e-206 MA20_36090 S Protein of unknown function (DUF2974)
PKJOBBIB_02157 2.6e-112 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_02158 7.5e-55 K Transcriptional regulator PadR-like family
PKJOBBIB_02159 6.6e-65
PKJOBBIB_02160 7.1e-136
PKJOBBIB_02161 1.2e-45 S Enterocin A Immunity
PKJOBBIB_02162 3.6e-45 S Enterocin A Immunity
PKJOBBIB_02163 2.2e-45 spiA K TRANSCRIPTIONal
PKJOBBIB_02164 1.5e-250 yjjP S Putative threonine/serine exporter
PKJOBBIB_02166 5.7e-61
PKJOBBIB_02167 2e-108 mesE M Transport protein ComB
PKJOBBIB_02168 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02169 4.1e-97 mesE M Transport protein ComB
PKJOBBIB_02170 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PKJOBBIB_02173 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02174 3e-19 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PKJOBBIB_02175 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02176 4.9e-118 2.7.13.3 T protein histidine kinase activity
PKJOBBIB_02177 9.5e-144 plnD K LytTr DNA-binding domain
PKJOBBIB_02179 2.5e-09
PKJOBBIB_02183 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02184 2.5e-142 S CAAX protease self-immunity
PKJOBBIB_02186 2.6e-55
PKJOBBIB_02188 4.2e-53 S Enterocin A Immunity
PKJOBBIB_02189 1.7e-102 yncA 2.3.1.79 S Maltose acetyltransferase
PKJOBBIB_02191 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02194 7.4e-180 S Aldo keto reductase
PKJOBBIB_02195 7.9e-121 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PKJOBBIB_02196 5.4e-217 yqiG C Oxidoreductase
PKJOBBIB_02197 8.6e-254 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PKJOBBIB_02198 1.6e-132
PKJOBBIB_02199 4.5e-20
PKJOBBIB_02200 1.1e-260 mntH P H( )-stimulated, divalent metal cation uptake system
PKJOBBIB_02201 0.0 pacL P P-type ATPase
PKJOBBIB_02202 7.5e-56
PKJOBBIB_02203 4.6e-239 EGP Major Facilitator Superfamily
PKJOBBIB_02204 0.0 mco Q Multicopper oxidase
PKJOBBIB_02205 1.2e-25
PKJOBBIB_02206 6.4e-111 2.5.1.105 P Cation efflux family
PKJOBBIB_02207 5.4e-53 czrA K Transcriptional regulator, ArsR family
PKJOBBIB_02208 7.6e-177 sitA P Belongs to the bacterial solute-binding protein 9 family
PKJOBBIB_02209 3.6e-144 mtsB U ABC 3 transport family
PKJOBBIB_02210 3.4e-132 mntB 3.6.3.35 P AAA domain, putative AbiEii toxin, Type IV TA system
PKJOBBIB_02211 1.1e-275 aldA 1.2.1.21, 1.2.1.22 C Belongs to the aldehyde dehydrogenase family
PKJOBBIB_02212 5e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PKJOBBIB_02213 5.9e-166 znuA P Belongs to the bacterial solute-binding protein 9 family
PKJOBBIB_02214 1.2e-117 GM NmrA-like family
PKJOBBIB_02215 1.5e-112 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
PKJOBBIB_02216 2.6e-70
PKJOBBIB_02217 1.7e-252 M domain protein
PKJOBBIB_02218 4.9e-165 znuA P Belongs to the bacterial solute-binding protein 9 family
PKJOBBIB_02219 6.1e-20
PKJOBBIB_02220 2.3e-38 S zinc-ribbon domain
PKJOBBIB_02222 1.6e-96
PKJOBBIB_02224 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02228 1.5e-51 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PKJOBBIB_02229 5.6e-68 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PKJOBBIB_02231 4.7e-36 eno 4.2.1.11 G phosphopyruvate hydratase activity
PKJOBBIB_02232 2.3e-157 phnD P Phosphonate ABC transporter
PKJOBBIB_02233 7.5e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PKJOBBIB_02234 7.8e-135 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PKJOBBIB_02235 5e-145 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PKJOBBIB_02236 6.2e-174 ssuA P NMT1-like family
PKJOBBIB_02237 4e-292 6.2.1.3, 6.2.1.8 IQ AMP-binding enzyme C-terminal domain
PKJOBBIB_02238 6.3e-232 yfiQ I Acyltransferase family
PKJOBBIB_02239 3.3e-116 ssuB P ATPases associated with a variety of cellular activities
PKJOBBIB_02240 1.4e-147 ssuC U Binding-protein-dependent transport system inner membrane component
PKJOBBIB_02241 3.1e-21 S Protein of unknown function (DUF2785)
PKJOBBIB_02242 7.7e-100
PKJOBBIB_02243 6.2e-54
PKJOBBIB_02244 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PKJOBBIB_02245 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PKJOBBIB_02246 2.3e-105 K Bacterial regulatory proteins, tetR family
PKJOBBIB_02247 1.7e-185 yxeA V FtsX-like permease family
PKJOBBIB_02248 2.9e-128 devA 3.6.3.25 V ATPases associated with a variety of cellular activities
PKJOBBIB_02249 1.1e-33
PKJOBBIB_02250 6.9e-112 tipA K TipAS antibiotic-recognition domain
PKJOBBIB_02251 2.9e-139 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PKJOBBIB_02252 8.7e-142 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PKJOBBIB_02253 3e-156 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PKJOBBIB_02254 1.6e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PKJOBBIB_02255 4.4e-110
PKJOBBIB_02256 4.8e-61 rplQ J Ribosomal protein L17
PKJOBBIB_02257 3.6e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PKJOBBIB_02258 4e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PKJOBBIB_02259 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PKJOBBIB_02260 6.6e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PKJOBBIB_02261 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PKJOBBIB_02262 1.6e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PKJOBBIB_02263 2e-231 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PKJOBBIB_02264 6.5e-62 rplO J Binds to the 23S rRNA
PKJOBBIB_02265 3.9e-24 rpmD J Ribosomal protein L30
PKJOBBIB_02266 1.2e-83 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PKJOBBIB_02267 1.8e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PKJOBBIB_02268 1.7e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PKJOBBIB_02269 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PKJOBBIB_02270 8.5e-96 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PKJOBBIB_02271 1.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PKJOBBIB_02272 2.1e-58 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PKJOBBIB_02273 1.9e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PKJOBBIB_02274 1.1e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PKJOBBIB_02275 2.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PKJOBBIB_02276 6.2e-109 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PKJOBBIB_02277 1.1e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PKJOBBIB_02278 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PKJOBBIB_02279 2.9e-156 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PKJOBBIB_02280 2e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PKJOBBIB_02281 1.7e-108 rplD J Forms part of the polypeptide exit tunnel
PKJOBBIB_02282 4e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PKJOBBIB_02283 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PKJOBBIB_02284 1.6e-68 psiE S Phosphate-starvation-inducible E
PKJOBBIB_02285 6.5e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
PKJOBBIB_02286 1.6e-199 yfjR K WYL domain
PKJOBBIB_02287 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PKJOBBIB_02288 8.4e-84 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PKJOBBIB_02289 1.2e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PKJOBBIB_02290 0.0 M domain protein
PKJOBBIB_02291 8.1e-37 3.4.23.43
PKJOBBIB_02292 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PKJOBBIB_02293 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PKJOBBIB_02294 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PKJOBBIB_02295 4.3e-80 ctsR K Belongs to the CtsR family
PKJOBBIB_02304 4e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
PKJOBBIB_02305 6.4e-69 S COG NOG38524 non supervised orthologous group
PKJOBBIB_02308 6.1e-35
PKJOBBIB_02309 6.6e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PKJOBBIB_02310 1.2e-188 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PKJOBBIB_02311 1.4e-161 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PKJOBBIB_02312 1e-162 S WxL domain surface cell wall-binding
PKJOBBIB_02313 1.6e-183 S Bacterial protein of unknown function (DUF916)
PKJOBBIB_02314 4.9e-193 S Protein of unknown function C-terminal (DUF3324)
PKJOBBIB_02315 0.0 S Leucine-rich repeat (LRR) protein
PKJOBBIB_02316 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PKJOBBIB_02317 1.3e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PKJOBBIB_02318 2.5e-242 tilS 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PKJOBBIB_02319 9.3e-70 yabR J RNA binding
PKJOBBIB_02320 1.1e-66 divIC D cell cycle
PKJOBBIB_02321 2.7e-39 yabO J S4 domain protein
PKJOBBIB_02322 3.2e-281 yabM S Polysaccharide biosynthesis protein
PKJOBBIB_02323 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PKJOBBIB_02324 3.6e-102 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PKJOBBIB_02325 4.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PKJOBBIB_02326 5.5e-261 S Putative peptidoglycan binding domain
PKJOBBIB_02327 2.3e-119 S (CBS) domain
PKJOBBIB_02328 4.9e-120 yciB M ErfK YbiS YcfS YnhG
PKJOBBIB_02330 1.2e-282 gltD 1.4.1.13, 1.4.1.14 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PKJOBBIB_02331 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1, 2.1.1.21 E GXGXG motif
PKJOBBIB_02332 1.7e-85 S QueT transporter
PKJOBBIB_02333 5.9e-62 ndoA L Toxic component of a toxin-antitoxin (TA) module
PKJOBBIB_02334 5.2e-32
PKJOBBIB_02335 3.1e-217 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PKJOBBIB_02336 8.5e-63 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PKJOBBIB_02337 7e-265 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PKJOBBIB_02339 3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PKJOBBIB_02340 1.1e-144
PKJOBBIB_02341 9.6e-123 S Tetratricopeptide repeat
PKJOBBIB_02342 3.7e-125
PKJOBBIB_02343 3.6e-65
PKJOBBIB_02344 2.5e-42 rpmE2 J Ribosomal protein L31
PKJOBBIB_02345 1.6e-235 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PKJOBBIB_02346 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PKJOBBIB_02347 1.3e-157 S Protein of unknown function (DUF1211)
PKJOBBIB_02348 4.5e-54 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PKJOBBIB_02349 1e-78 ywiB S Domain of unknown function (DUF1934)
PKJOBBIB_02350 2.3e-156 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
PKJOBBIB_02351 7.9e-268 ywfO S HD domain protein
PKJOBBIB_02352 1.4e-80 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L NUDIX domain
PKJOBBIB_02353 2.2e-180 S DUF218 domain
PKJOBBIB_02354 2.1e-53 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PKJOBBIB_02355 1.3e-77 E glutamate:sodium symporter activity
PKJOBBIB_02356 1.7e-54 nudA S ASCH
PKJOBBIB_02357 3e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PKJOBBIB_02358 1.4e-216 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PKJOBBIB_02359 4.9e-221 ysaA V RDD family
PKJOBBIB_02360 2.2e-151 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PKJOBBIB_02361 2.5e-118 ybbL S ABC transporter, ATP-binding protein
PKJOBBIB_02362 9e-120 ybbM S Uncharacterised protein family (UPF0014)
PKJOBBIB_02363 1.9e-158 czcD P cation diffusion facilitator family transporter
PKJOBBIB_02364 1.8e-181 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PKJOBBIB_02365 1.1e-37 veg S Biofilm formation stimulator VEG
PKJOBBIB_02366 2.6e-158 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PKJOBBIB_02367 3.8e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PKJOBBIB_02368 3.6e-148 tatD L hydrolase, TatD family
PKJOBBIB_02369 2.6e-80 manR 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G phosphoenolpyruvate-dependent sugar phosphotransferase system
PKJOBBIB_02370 5e-187 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
PKJOBBIB_02371 4.5e-171 yqhA G Aldose 1-epimerase
PKJOBBIB_02372 9.5e-124 T LytTr DNA-binding domain
PKJOBBIB_02373 5.5e-140 2.7.13.3 T GHKL domain
PKJOBBIB_02374 0.0 V ABC transporter
PKJOBBIB_02375 0.0 V ABC transporter
PKJOBBIB_02376 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PKJOBBIB_02377 4.3e-174 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PKJOBBIB_02378 3e-153 yunF F Protein of unknown function DUF72
PKJOBBIB_02379 3.8e-92 3.6.1.55 F NUDIX domain
PKJOBBIB_02380 6e-171 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PKJOBBIB_02381 1.6e-106 yiiE S Protein of unknown function (DUF1211)
PKJOBBIB_02382 1.1e-127 cobB K Sir2 family
PKJOBBIB_02383 1.4e-16
PKJOBBIB_02384 3.6e-171
PKJOBBIB_02386 7.9e-96 yxkA S Phosphatidylethanolamine-binding protein
PKJOBBIB_02387 1.6e-18
PKJOBBIB_02388 3.9e-150 ypuA S Protein of unknown function (DUF1002)
PKJOBBIB_02389 2.7e-174 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PKJOBBIB_02390 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PKJOBBIB_02391 2.1e-285 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PKJOBBIB_02392 1.9e-175 S Aldo keto reductase
PKJOBBIB_02393 6.1e-154 Q Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
PKJOBBIB_02394 3.1e-92 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PKJOBBIB_02395 4.1e-240 dinF V MatE
PKJOBBIB_02396 1.9e-110 S TPM domain
PKJOBBIB_02397 5.2e-102 lemA S LemA family
PKJOBBIB_02398 1.6e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PKJOBBIB_02399 5e-251 gshR 1.8.1.7 C Glutathione reductase
PKJOBBIB_02400 1.3e-176 proV E ABC transporter, ATP-binding protein
PKJOBBIB_02401 4e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PKJOBBIB_02403 0.0 helD 3.6.4.12 L DNA helicase
PKJOBBIB_02404 8.6e-148 rlrG K Transcriptional regulator
PKJOBBIB_02405 3.1e-173 shetA P Voltage-dependent anion channel
PKJOBBIB_02406 2.8e-114 S CAAX protease self-immunity
PKJOBBIB_02408 3.5e-115 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PKJOBBIB_02409 4.9e-54 K MarR family
PKJOBBIB_02410 0.0 uvrA3 L excinuclease ABC
PKJOBBIB_02411 3.6e-193 yghZ C Aldo keto reductase family protein
PKJOBBIB_02412 3.3e-144 S hydrolase
PKJOBBIB_02413 8.1e-60
PKJOBBIB_02414 4.1e-11
PKJOBBIB_02415 7.3e-105 yoaK S Protein of unknown function (DUF1275)
PKJOBBIB_02416 6.4e-125 yjhF G Phosphoglycerate mutase family
PKJOBBIB_02417 3e-153 yitU 3.1.3.104 S hydrolase
PKJOBBIB_02418 2.6e-88 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PKJOBBIB_02419 1.7e-165 K LysR substrate binding domain
PKJOBBIB_02420 3.5e-227 EK Aminotransferase, class I
PKJOBBIB_02421 4.9e-181 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PKJOBBIB_02422 2e-118 ydfK S Protein of unknown function (DUF554)
PKJOBBIB_02423 1.1e-88
PKJOBBIB_02424 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PKJOBBIB_02425 5.6e-172 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
PKJOBBIB_02426 2.8e-129 rpl K Helix-turn-helix domain, rpiR family
PKJOBBIB_02427 3.6e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PKJOBBIB_02428 1.2e-134 L Transposase, IS116 IS110 IS902 family
PKJOBBIB_02430 6.3e-294 plyA3 M Right handed beta helix region
PKJOBBIB_02431 3.5e-63
PKJOBBIB_02432 0.0 M Heparinase II/III N-terminus
PKJOBBIB_02434 5.1e-81 G PTS system fructose IIA component
PKJOBBIB_02435 5.6e-144 agaD G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_02436 1.6e-143 G PTS system sorbose-specific iic component
PKJOBBIB_02437 3.5e-88 agaV 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_02438 6.5e-234 ugl 3.2.1.180 GH88 S Glycosyl Hydrolase Family 88
PKJOBBIB_02439 1.1e-155 Z012_03480 S Psort location Cytoplasmic, score
PKJOBBIB_02440 5.1e-139 K Bacterial transcriptional regulator
PKJOBBIB_02441 5.6e-163 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PKJOBBIB_02442 2.2e-151 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PKJOBBIB_02443 1.8e-116 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PKJOBBIB_02444 6e-55 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
PKJOBBIB_02445 1.9e-129 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
PKJOBBIB_02446 3.5e-117 alkD L DNA alkylation repair enzyme
PKJOBBIB_02447 3.4e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PKJOBBIB_02448 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PKJOBBIB_02449 5.6e-172 ykoT GT2 M Glycosyl transferase family 2
PKJOBBIB_02450 5.2e-119 lssY 3.6.1.27 I phosphatase
PKJOBBIB_02451 3.1e-116 dedA S SNARE-like domain protein
PKJOBBIB_02452 2.5e-240 T PhoQ Sensor
PKJOBBIB_02453 4.5e-126 K Transcriptional regulatory protein, C terminal
PKJOBBIB_02454 4.9e-273 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PKJOBBIB_02455 5.3e-295 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PKJOBBIB_02456 0.0 4.2.2.1 PL8 N Polysaccharide lyase family 8, N terminal alpha-helical domain
PKJOBBIB_02458 4.8e-45
PKJOBBIB_02459 2.7e-294
PKJOBBIB_02461 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02462 5.7e-68
PKJOBBIB_02463 4.9e-85
PKJOBBIB_02464 1.7e-138 mga K M protein trans-acting positive regulator
PKJOBBIB_02465 2e-126 tnp L DDE domain
PKJOBBIB_02466 3.8e-155 glmS2 G Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PKJOBBIB_02467 7e-74 K UTRA
PKJOBBIB_02468 2.1e-55 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_02469 2.2e-97 G PTS system sorbose-specific iic component
PKJOBBIB_02470 3.1e-113 G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_02471 1.6e-32 XK27_08465 2.7.1.191 G PTS system fructose IIA component
PKJOBBIB_02473 3.5e-78 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PKJOBBIB_02474 1.9e-74 rpoN K Sigma-54 factor, core binding domain
PKJOBBIB_02475 1.5e-51 S HAD hydrolase, family IA, variant 3
PKJOBBIB_02476 2.6e-119 glmS2 G Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PKJOBBIB_02477 5.1e-108 G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_02478 4.9e-82 G PTS system sorbose-specific iic component
PKJOBBIB_02479 4.2e-51 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_02480 5e-24 G PTS system fructose IIA component
PKJOBBIB_02481 4.3e-228 K Sigma-54 interaction domain
PKJOBBIB_02482 3.8e-118 glmS2 M Psort location Cytoplasmic, score
PKJOBBIB_02483 1.6e-52 K DNA-binding transcription factor activity
PKJOBBIB_02484 5.7e-18 S HAD hydrolase, family IA, variant 3
PKJOBBIB_02486 1.6e-09
PKJOBBIB_02491 2.1e-44 tnp L DDE domain
PKJOBBIB_02492 2.5e-32
PKJOBBIB_02493 1.9e-86 M glutamine-fructose-6-phosphate transaminase (isomerizing) activity
PKJOBBIB_02494 8e-24 S Sterol carrier protein domain
PKJOBBIB_02495 4.2e-29 G PTS system fructose IIA component
PKJOBBIB_02496 5.5e-123 G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_02497 4.1e-110 agaC G PTS system sorbose-specific iic component
PKJOBBIB_02498 1.5e-132 agaB 2.7.1.191 K PTS system sorbose subfamily IIB component
PKJOBBIB_02499 4.4e-166 agaS G SIS domain
PKJOBBIB_02500 6e-60 XK27_08435 K UTRA
PKJOBBIB_02501 2e-115 L Resolvase, N terminal domain
PKJOBBIB_02502 1e-44 ligA 6.5.1.2 L BRCA1 C Terminus (BRCT) domain
PKJOBBIB_02503 3.3e-135 yvdE K helix_turn _helix lactose operon repressor
PKJOBBIB_02504 2.5e-134 malG P ABC transporter permease
PKJOBBIB_02505 2.1e-204 malF P Binding-protein-dependent transport system inner membrane component
PKJOBBIB_02506 1e-165 malE G Bacterial extracellular solute-binding protein
PKJOBBIB_02507 8.6e-229 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PKJOBBIB_02508 7.2e-174 msmX P Belongs to the ABC transporter superfamily
PKJOBBIB_02509 4.8e-72 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
PKJOBBIB_02510 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PKJOBBIB_02511 1.8e-248 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PKJOBBIB_02512 7.5e-228 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PKJOBBIB_02513 1e-45 L 4.5 Transposon and IS
PKJOBBIB_02514 3.7e-148 L hmm pf00665
PKJOBBIB_02515 1.1e-59 L Helix-turn-helix domain
PKJOBBIB_02516 5.3e-62 L Helix-turn-helix domain
PKJOBBIB_02517 8.9e-45 L 4.5 Transposon and IS
PKJOBBIB_02518 1.4e-172 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02519 6.4e-260 E ABC transporter, substratebinding protein
PKJOBBIB_02520 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02521 3.2e-46 6.3.4.4 S Zeta toxin
PKJOBBIB_02522 2.7e-128 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PKJOBBIB_02523 1.2e-103 IQ KR domain
PKJOBBIB_02524 8.7e-65 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_02525 8e-36 2.7.1.191 G PTS system fructose IIA component
PKJOBBIB_02526 1.3e-246 G PTS system sorbose-specific iic component
PKJOBBIB_02527 1.8e-152 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
PKJOBBIB_02528 2.8e-81 K Helix-turn-helix domain, rpiR family
PKJOBBIB_02529 3.4e-36
PKJOBBIB_02530 1.1e-55
PKJOBBIB_02532 8.7e-96 K Helix-turn-helix domain
PKJOBBIB_02533 4.4e-121 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PKJOBBIB_02534 1.1e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PKJOBBIB_02535 8.6e-254 ugpB G Bacterial extracellular solute-binding protein
PKJOBBIB_02536 3.4e-149 ugpE G ABC transporter permease
PKJOBBIB_02537 2.5e-164 ugpA P ABC-type sugar transport systems, permease components
PKJOBBIB_02538 4.3e-211 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
PKJOBBIB_02539 7.6e-269 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PKJOBBIB_02540 2.2e-102 pncA Q Isochorismatase family
PKJOBBIB_02541 3.9e-136 3.6.1.13, 3.6.1.55 F NUDIX domain
PKJOBBIB_02542 0.0 sca1 G Belongs to the glycosyl hydrolase 31 family
PKJOBBIB_02543 2.6e-106 3.5.2.6 V Beta-lactamase enzyme family
PKJOBBIB_02544 9.5e-192 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PKJOBBIB_02545 8.2e-193 blaA6 V Beta-lactamase
PKJOBBIB_02546 7.8e-155 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PKJOBBIB_02547 8.9e-162 ybbH_2 K Helix-turn-helix domain, rpiR family
PKJOBBIB_02548 3.1e-81 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_02549 8.3e-151 G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_02550 3.1e-129 G PTS system sorbose-specific iic component
PKJOBBIB_02551 1.2e-202 S endonuclease exonuclease phosphatase family protein
PKJOBBIB_02552 3.3e-172 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PKJOBBIB_02553 1.3e-136 draG 3.2.2.24 O ADP-ribosylglycohydrolase
PKJOBBIB_02554 9.9e-52 sugE U Multidrug resistance protein
PKJOBBIB_02555 1.6e-134 S -acetyltransferase
PKJOBBIB_02556 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02557 1.7e-72 MA20_25245 K FR47-like protein
PKJOBBIB_02558 1.3e-93 hisB 2.7.7.71, 3.1.3.15, 3.1.3.82, 3.1.3.83, 4.2.1.19, 5.3.1.28, 6.3.2.10 GT9 E HAD-hyrolase-like
PKJOBBIB_02559 1.3e-185 1.1.1.1 C nadph quinone reductase
PKJOBBIB_02560 1.2e-137 wzb 3.1.3.48 T Tyrosine phosphatase family
PKJOBBIB_02561 2.4e-92 K Acetyltransferase (GNAT) domain
PKJOBBIB_02562 9e-83 yiaC K Acetyltransferase (GNAT) domain
PKJOBBIB_02563 5.4e-75 2.3.1.82 K Acetyltransferase (GNAT) domain
PKJOBBIB_02564 8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PKJOBBIB_02565 4.1e-198 ybiR P Citrate transporter
PKJOBBIB_02566 5.1e-68
PKJOBBIB_02567 3.1e-256 E Peptidase dimerisation domain
PKJOBBIB_02568 1e-298 E ABC transporter, substratebinding protein
PKJOBBIB_02569 2.2e-101
PKJOBBIB_02570 0.0 cadA P P-type ATPase
PKJOBBIB_02571 6e-76 hsp3 O Belongs to the small heat shock protein (HSP20) family
PKJOBBIB_02572 4.1e-71 S Iron-sulphur cluster biosynthesis
PKJOBBIB_02573 1e-211 htrA 3.4.21.107 O serine protease
PKJOBBIB_02574 1.2e-154 vicX 3.1.26.11 S domain protein
PKJOBBIB_02575 1.3e-140 yycI S YycH protein
PKJOBBIB_02576 3.3e-256 yycH S YycH protein
PKJOBBIB_02577 0.0 vicK 2.7.13.3 T Histidine kinase
PKJOBBIB_02578 8.1e-131 K response regulator
PKJOBBIB_02579 2.2e-122 3.1.1.24 S Alpha/beta hydrolase family
PKJOBBIB_02580 4.2e-259 arpJ P ABC transporter permease
PKJOBBIB_02581 3.9e-234 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PKJOBBIB_02582 2.4e-264 argH 4.3.2.1 E argininosuccinate lyase
PKJOBBIB_02583 5e-212 S Bacterial protein of unknown function (DUF871)
PKJOBBIB_02584 1.6e-73 S Domain of unknown function (DUF3284)
PKJOBBIB_02585 5.5e-253 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PKJOBBIB_02586 1.1e-130 K UTRA
PKJOBBIB_02587 1.3e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PKJOBBIB_02588 2.4e-53 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PKJOBBIB_02589 3.1e-106 speG J Acetyltransferase (GNAT) domain
PKJOBBIB_02590 1.7e-84 F NUDIX domain
PKJOBBIB_02591 4.3e-89 S AAA domain
PKJOBBIB_02592 2.3e-113 ycaC Q Isochorismatase family
PKJOBBIB_02593 1.9e-243 ydiC1 EGP Major Facilitator Superfamily
PKJOBBIB_02594 2.9e-213 yeaN P Transporter, major facilitator family protein
PKJOBBIB_02595 9.5e-172 iolS C Aldo keto reductase
PKJOBBIB_02596 3.4e-64 manO S Domain of unknown function (DUF956)
PKJOBBIB_02597 5.6e-34 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_02598 2.5e-169 manN G system, mannose fructose sorbose family IID component
PKJOBBIB_02599 8.7e-121 manY G PTS system
PKJOBBIB_02600 8.1e-182 manL 2.7.1.191, 2.7.1.206 G PTS system sorbose subfamily IIB component
PKJOBBIB_02601 7e-218 EGP Major facilitator Superfamily
PKJOBBIB_02602 7.9e-188 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_02603 4.6e-149 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_02604 1.1e-158 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_02606 3.1e-287 glnP P ABC transporter permease
PKJOBBIB_02607 3.1e-133 glnQ E ABC transporter, ATP-binding protein
PKJOBBIB_02608 1.7e-30
PKJOBBIB_02609 8.8e-237 G Bacterial extracellular solute-binding protein
PKJOBBIB_02610 1.5e-129 S Protein of unknown function (DUF975)
PKJOBBIB_02611 4.9e-41 yqkB S Iron-sulphur cluster biosynthesis
PKJOBBIB_02612 3.4e-52
PKJOBBIB_02613 8.5e-68 S Bacterial PH domain
PKJOBBIB_02614 1.7e-266 ydbT S Bacterial PH domain
PKJOBBIB_02615 1.1e-144 S AAA ATPase domain
PKJOBBIB_02616 6.6e-167 yniA G Phosphotransferase enzyme family
PKJOBBIB_02617 3.4e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PKJOBBIB_02618 9.8e-264 glnP P ABC transporter
PKJOBBIB_02619 2.1e-266 glnP P ABC transporter
PKJOBBIB_02620 1.1e-98 ydaF J Acetyltransferase (GNAT) domain
PKJOBBIB_02621 1.8e-105 S Stage II sporulation protein M
PKJOBBIB_02622 2.1e-142 yeaC S ATPase family associated with various cellular activities (AAA)
PKJOBBIB_02623 2e-183 yeaD S Protein of unknown function DUF58
PKJOBBIB_02624 2.3e-309 yebA E Transglutaminase/protease-like homologues
PKJOBBIB_02625 4.5e-213 lsgC M Glycosyl transferases group 1
PKJOBBIB_02626 4.8e-90 maa 2.3.1.79 S Maltose acetyltransferase
PKJOBBIB_02627 4.2e-144 3.1.3.102, 3.1.3.104 G Sucrose-6F-phosphate phosphohydrolase
PKJOBBIB_02628 2.7e-255 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
PKJOBBIB_02629 1.5e-114 S Bacteriocin-protection, YdeI or OmpD-Associated
PKJOBBIB_02630 9.9e-36 yjdF S Protein of unknown function (DUF2992)
PKJOBBIB_02631 3.1e-212 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
PKJOBBIB_02632 2e-223 maeN C 2-hydroxycarboxylate transporter family
PKJOBBIB_02633 3.5e-288 dpiB 2.7.13.3 T Single cache domain 3
PKJOBBIB_02634 8.7e-122 dpiA KT cheY-homologous receiver domain
PKJOBBIB_02635 3.8e-151 1.1.1.31 I NAD binding domain of 6-phosphogluconate dehydrogenase
PKJOBBIB_02636 3.3e-94 M1-431 S Protein of unknown function (DUF1706)
PKJOBBIB_02640 3e-21 L DDE superfamily endonuclease
PKJOBBIB_02642 1.9e-06 K sequence-specific DNA binding
PKJOBBIB_02644 5.1e-58
PKJOBBIB_02645 7.7e-212 yagE E Amino acid permease
PKJOBBIB_02646 2.8e-171 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
PKJOBBIB_02648 3e-170 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PKJOBBIB_02649 6.6e-181 D Alpha beta
PKJOBBIB_02650 1.8e-186 lipA I Carboxylesterase family
PKJOBBIB_02651 5.1e-207 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PKJOBBIB_02652 1.1e-77 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PKJOBBIB_02653 0.0 mtlR K Mga helix-turn-helix domain
PKJOBBIB_02654 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PKJOBBIB_02655 1.9e-130 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PKJOBBIB_02656 1.2e-148 S haloacid dehalogenase-like hydrolase
PKJOBBIB_02657 3.1e-43
PKJOBBIB_02658 5.2e-10
PKJOBBIB_02659 1.1e-184 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PKJOBBIB_02660 2.5e-124 V ABC transporter
PKJOBBIB_02661 2e-206 bacI V MacB-like periplasmic core domain
PKJOBBIB_02662 0.0 M Leucine rich repeats (6 copies)
PKJOBBIB_02663 2.3e-201 gldA 1.1.1.1, 1.1.1.6 C dehydrogenase
PKJOBBIB_02664 5.1e-226 amd 3.5.1.47 E Peptidase family M20/M25/M40
PKJOBBIB_02665 5.9e-80 S Threonine/Serine exporter, ThrE
PKJOBBIB_02666 7.6e-135 thrE S Putative threonine/serine exporter
PKJOBBIB_02668 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PKJOBBIB_02669 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PKJOBBIB_02670 8.2e-129 jag S R3H domain protein
PKJOBBIB_02671 2.6e-136 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PKJOBBIB_02672 2.1e-59 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PKJOBBIB_02673 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PKJOBBIB_02674 1.2e-252 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PKJOBBIB_02675 5.2e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PKJOBBIB_02677 1.7e-31 yaaA S S4 domain protein YaaA
PKJOBBIB_02678 2.5e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PKJOBBIB_02679 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PKJOBBIB_02680 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PKJOBBIB_02681 2.7e-126 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PKJOBBIB_02682 8.5e-75 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PKJOBBIB_02683 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PKJOBBIB_02684 5.3e-67 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PKJOBBIB_02685 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PKJOBBIB_02686 5.6e-283 cydA 1.10.3.14 C Cytochrome bd terminal oxidase subunit I
PKJOBBIB_02687 7.9e-180 cydB 1.10.3.14 C Cytochrome bd terminal oxidase subunit II
PKJOBBIB_02688 1.2e-28
PKJOBBIB_02689 2.6e-106 S Protein of unknown function (DUF1211)
PKJOBBIB_02692 1.7e-138 S CAAX protease self-immunity
PKJOBBIB_02695 4.7e-110 usp 3.5.1.28 CBM50 D CHAP domain
PKJOBBIB_02696 0.0 ylbB V ABC transporter permease
PKJOBBIB_02697 2.8e-128 macB V ABC transporter, ATP-binding protein
PKJOBBIB_02698 2.2e-99 K transcriptional regulator
PKJOBBIB_02699 5.4e-155 supH G Sucrose-6F-phosphate phosphohydrolase
PKJOBBIB_02700 3e-48
PKJOBBIB_02703 2e-132 ybfG M peptidoglycan-binding domain-containing protein
PKJOBBIB_02704 8.1e-263 ybfG M peptidoglycan-binding domain-containing protein
PKJOBBIB_02705 4.7e-124 S membrane transporter protein
PKJOBBIB_02706 1.8e-102 S Protein of unknown function (DUF1211)
PKJOBBIB_02707 9.1e-164 corA P CorA-like Mg2+ transporter protein
PKJOBBIB_02708 1.2e-112 K Bacterial regulatory proteins, tetR family
PKJOBBIB_02710 3.4e-242 mntH P H( )-stimulated, divalent metal cation uptake system
PKJOBBIB_02712 7.3e-288 pipD E Dipeptidase
PKJOBBIB_02713 8e-106 S Membrane
PKJOBBIB_02714 3.1e-102
PKJOBBIB_02715 5.7e-33
PKJOBBIB_02716 2.2e-47 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02717 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02718 2.1e-52
PKJOBBIB_02719 5.8e-121 azlC E branched-chain amino acid
PKJOBBIB_02720 7.3e-50 azlD S Branched-chain amino acid transport protein (AzlD)
PKJOBBIB_02722 1.2e-24
PKJOBBIB_02723 2.5e-144 S CAAX protease self-immunity
PKJOBBIB_02724 1.7e-114 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PKJOBBIB_02725 2.2e-125 kdgR K FCD domain
PKJOBBIB_02727 1.2e-54
PKJOBBIB_02728 2.5e-31
PKJOBBIB_02730 2.1e-133 mmgC 1.3.8.1 I Acyl-CoA dehydrogenase, C-terminal domain
PKJOBBIB_02731 2.6e-77 etfB C Electron transfer flavoprotein domain
PKJOBBIB_02732 1e-80 etfA C Electron transfer flavoprotein
PKJOBBIB_02733 3e-31 K Helix-turn-helix domain
PKJOBBIB_02734 3.7e-55 S pyridoxamine 5-phosphate
PKJOBBIB_02735 9.2e-156 K Transcriptional activator, Rgg GadR MutR family
PKJOBBIB_02736 1e-282 V ABC-type multidrug transport system, ATPase and permease components
PKJOBBIB_02737 7.5e-242 EGP Major facilitator Superfamily
PKJOBBIB_02738 8.8e-13 K TRANSCRIPTIONal
PKJOBBIB_02739 0.0 ydgH S MMPL family
PKJOBBIB_02740 7.4e-109 K Tetracycline repressor, C-terminal all-alpha domain
PKJOBBIB_02742 3.3e-110 opuCD P Binding-protein-dependent transport system inner membrane component
PKJOBBIB_02743 3.3e-172 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PKJOBBIB_02744 1e-105 opuCB E ABC transporter permease
PKJOBBIB_02745 3.4e-217 opuCA 2.7.7.7 E ABC transporter, ATP-binding protein
PKJOBBIB_02746 2.6e-22 ypbD S CAAX protease self-immunity
PKJOBBIB_02747 0.0 3.6.3.3, 3.6.3.5 P P-type ATPase
PKJOBBIB_02748 2.5e-33 copZ P Heavy-metal-associated domain
PKJOBBIB_02749 7.2e-101 dps P Belongs to the Dps family
PKJOBBIB_02750 5.2e-116 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PKJOBBIB_02751 3.3e-141 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PKJOBBIB_02752 1.5e-230 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PKJOBBIB_02753 1.9e-104 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PKJOBBIB_02754 2e-138 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PKJOBBIB_02755 1.5e-181 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PKJOBBIB_02756 8.8e-204
PKJOBBIB_02757 1.4e-307 norB EGP Major Facilitator
PKJOBBIB_02758 2.5e-106 K Bacterial regulatory proteins, tetR family
PKJOBBIB_02760 4.7e-43
PKJOBBIB_02762 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02763 6.7e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PKJOBBIB_02764 1.8e-167 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PKJOBBIB_02765 5.2e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PKJOBBIB_02766 2.1e-70 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PKJOBBIB_02767 8.1e-257 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PKJOBBIB_02768 3.4e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
PKJOBBIB_02769 3.9e-187 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PKJOBBIB_02770 1.5e-194 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PKJOBBIB_02771 1.2e-61
PKJOBBIB_02772 3.2e-71 3.6.1.55 L NUDIX domain
PKJOBBIB_02773 9.5e-38 EG EamA-like transporter family
PKJOBBIB_02774 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02775 2.6e-80 EG EamA-like transporter family
PKJOBBIB_02776 1.3e-94 S Phospholipase A2
PKJOBBIB_02778 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PKJOBBIB_02779 9e-75 rplI J Binds to the 23S rRNA
PKJOBBIB_02780 4.6e-247 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PKJOBBIB_02781 1.3e-218
PKJOBBIB_02782 1.8e-273 sacX 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PKJOBBIB_02783 5.6e-132 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PKJOBBIB_02784 1.8e-119 K Helix-turn-helix domain, rpiR family
PKJOBBIB_02785 2.4e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PKJOBBIB_02786 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PKJOBBIB_02787 3.2e-56 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PKJOBBIB_02788 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PKJOBBIB_02789 6.7e-159 lysR5 K LysR substrate binding domain
PKJOBBIB_02790 7.6e-200 K Helix-turn-helix XRE-family like proteins
PKJOBBIB_02791 4.8e-34 S Phospholipase_D-nuclease N-terminal
PKJOBBIB_02792 6.4e-168 yxlF V ABC transporter
PKJOBBIB_02793 6e-132 S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PKJOBBIB_02794 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PKJOBBIB_02796 4.1e-99 K Bacteriophage CI repressor helix-turn-helix domain
PKJOBBIB_02797 1.8e-259
PKJOBBIB_02798 5.5e-141 T Calcineurin-like phosphoesterase superfamily domain
PKJOBBIB_02799 1.4e-256 C COG0277 FAD FMN-containing dehydrogenases
PKJOBBIB_02800 1.1e-38
PKJOBBIB_02801 3.1e-41 S Protein of unknown function (DUF2089)
PKJOBBIB_02802 4.1e-181 I PAP2 superfamily
PKJOBBIB_02803 4.7e-207 mccF V LD-carboxypeptidase
PKJOBBIB_02804 4.3e-42
PKJOBBIB_02805 4e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PKJOBBIB_02806 7.7e-88 ogt 2.1.1.63 L Methyltransferase
PKJOBBIB_02807 8e-193 ldhD3 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PKJOBBIB_02808 9.2e-44
PKJOBBIB_02809 7.4e-86 slyA K Transcriptional regulator
PKJOBBIB_02810 3.7e-168 1.6.5.5 C alcohol dehydrogenase
PKJOBBIB_02811 1.4e-54 ypaA S Protein of unknown function (DUF1304)
PKJOBBIB_02812 1.4e-54 S Protein of unknown function (DUF1516)
PKJOBBIB_02813 9.1e-254 pbuO S permease
PKJOBBIB_02814 1.1e-45 S DsrE/DsrF-like family
PKJOBBIB_02815 3.4e-180 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PKJOBBIB_02816 1.1e-28
PKJOBBIB_02817 8.9e-104 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PKJOBBIB_02818 0.0
PKJOBBIB_02820 9.4e-171 L Transposase DDE domain
PKJOBBIB_02821 1e-109 S WxL domain surface cell wall-binding
PKJOBBIB_02822 1.5e-122 S WxL domain surface cell wall-binding
PKJOBBIB_02823 2.1e-183 ynjC S Cell surface protein
PKJOBBIB_02825 5.5e-267 L Mga helix-turn-helix domain
PKJOBBIB_02826 5.7e-175 yhaI S Protein of unknown function (DUF805)
PKJOBBIB_02827 1.2e-57
PKJOBBIB_02828 1.4e-253 rarA L recombination factor protein RarA
PKJOBBIB_02829 6.8e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PKJOBBIB_02830 3.3e-160 pphA 3.1.3.16 T Calcineurin-like phosphoesterase superfamily domain
PKJOBBIB_02831 4.9e-139 magIII L Base excision DNA repair protein, HhH-GPD family
PKJOBBIB_02832 1.7e-45 S Thiamine-binding protein
PKJOBBIB_02833 1.2e-246 yhgE V domain protein
PKJOBBIB_02834 2e-100 yobS K Bacterial regulatory proteins, tetR family
PKJOBBIB_02835 1.1e-254 bmr3 EGP Major facilitator Superfamily
PKJOBBIB_02837 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PKJOBBIB_02838 2.3e-298 oppA E ABC transporter, substratebinding protein
PKJOBBIB_02839 8.3e-84
PKJOBBIB_02840 5.7e-52
PKJOBBIB_02841 7.7e-68
PKJOBBIB_02842 2.1e-88 V ATPases associated with a variety of cellular activities
PKJOBBIB_02843 1.1e-41
PKJOBBIB_02844 8.1e-79 S NUDIX domain
PKJOBBIB_02845 1.5e-211 S nuclear-transcribed mRNA catabolic process, no-go decay
PKJOBBIB_02846 1.4e-234 L Transposase
PKJOBBIB_02847 0.0 fnq20 1.13.12.16 S FAD-NAD(P)-binding
PKJOBBIB_02848 2.1e-260 nox 1.6.3.4 C NADH oxidase
PKJOBBIB_02849 1.7e-116
PKJOBBIB_02850 4.6e-217 S TPM domain
PKJOBBIB_02851 4.6e-125 yxaA S Sulfite exporter TauE/SafE
PKJOBBIB_02852 1e-55 ywjH S Protein of unknown function (DUF1634)
PKJOBBIB_02855 6.5e-90
PKJOBBIB_02856 2.8e-48
PKJOBBIB_02857 2.4e-83 fld C Flavodoxin
PKJOBBIB_02858 1.2e-36
PKJOBBIB_02859 1.1e-26
PKJOBBIB_02860 1.9e-170 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PKJOBBIB_02861 1.4e-71 pdxH S Pyridoxamine 5'-phosphate oxidase
PKJOBBIB_02862 3.5e-39 S Transglycosylase associated protein
PKJOBBIB_02863 5.3e-82 S Protein conserved in bacteria
PKJOBBIB_02864 2.8e-25
PKJOBBIB_02865 7.4e-68 asp23 S Asp23 family, cell envelope-related function
PKJOBBIB_02866 1.6e-62 asp2 S Asp23 family, cell envelope-related function
PKJOBBIB_02867 1.1e-113 S Protein of unknown function (DUF969)
PKJOBBIB_02868 2.2e-152 S Protein of unknown function (DUF979)
PKJOBBIB_02869 4.2e-118 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PKJOBBIB_02870 6.5e-108 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PKJOBBIB_02871 1.1e-126 cobQ S glutamine amidotransferase
PKJOBBIB_02872 1.3e-66
PKJOBBIB_02873 8.4e-131 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PKJOBBIB_02874 1.7e-143 noc K Belongs to the ParB family
PKJOBBIB_02875 9.7e-138 soj D Sporulation initiation inhibitor
PKJOBBIB_02876 5.2e-156 spo0J K Belongs to the ParB family
PKJOBBIB_02877 1.8e-29 yyzM S Bacterial protein of unknown function (DUF951)
PKJOBBIB_02878 1.3e-185 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PKJOBBIB_02879 2.1e-106 XK27_01040 S Protein of unknown function (DUF1129)
PKJOBBIB_02880 2.5e-275 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PKJOBBIB_02881 1.4e-119
PKJOBBIB_02882 1.9e-121 K response regulator
PKJOBBIB_02883 3.9e-218 hpk31 2.7.13.3 T Histidine kinase
PKJOBBIB_02884 1.8e-237 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PKJOBBIB_02885 4.7e-79 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PKJOBBIB_02886 4.3e-294 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PKJOBBIB_02887 2.7e-140 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
PKJOBBIB_02888 1e-164 yvgN C Aldo keto reductase
PKJOBBIB_02889 2.5e-123 gntR K rpiR family
PKJOBBIB_02890 9.6e-169 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
PKJOBBIB_02891 3.5e-304 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PKJOBBIB_02892 2e-210 gntP EG Gluconate
PKJOBBIB_02893 7.6e-58
PKJOBBIB_02894 4.5e-129 fhuC 3.6.3.35 P ABC transporter
PKJOBBIB_02895 4.4e-133 znuB U ABC 3 transport family
PKJOBBIB_02896 1.6e-165 T Calcineurin-like phosphoesterase superfamily domain
PKJOBBIB_02897 9.3e-161 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PKJOBBIB_02898 0.0 pepF E oligoendopeptidase F
PKJOBBIB_02899 2.9e-188 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PKJOBBIB_02900 2.9e-249 brnQ U Component of the transport system for branched-chain amino acids
PKJOBBIB_02901 7e-71 T Sh3 type 3 domain protein
PKJOBBIB_02902 7.1e-133 glcR K DeoR C terminal sensor domain
PKJOBBIB_02903 2e-146 M Glycosyltransferase like family 2
PKJOBBIB_02904 3.3e-135 XK27_06755 S Protein of unknown function (DUF975)
PKJOBBIB_02905 9e-40
PKJOBBIB_02906 2.4e-107 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PKJOBBIB_02907 4.6e-174 draG O ADP-ribosylglycohydrolase
PKJOBBIB_02908 4.3e-294 S ABC transporter
PKJOBBIB_02909 2.2e-134 Q Methyltransferase domain
PKJOBBIB_02910 1.8e-34
PKJOBBIB_02911 6.4e-69 S COG NOG38524 non supervised orthologous group
PKJOBBIB_02912 4e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
PKJOBBIB_02913 1.4e-53 trxC O Belongs to the thioredoxin family
PKJOBBIB_02914 6.3e-137 thrE S Putative threonine/serine exporter
PKJOBBIB_02915 1.4e-75 S Threonine/Serine exporter, ThrE
PKJOBBIB_02916 4.9e-213 livJ E Receptor family ligand binding region
PKJOBBIB_02917 1.6e-149 livH U Branched-chain amino acid transport system / permease component
PKJOBBIB_02918 1.3e-120 livM E Branched-chain amino acid transport system / permease component
PKJOBBIB_02919 2.8e-140 livG E Branched-chain amino acid ATP-binding cassette transporter
PKJOBBIB_02920 5.1e-125 livF E ABC transporter
PKJOBBIB_02921 2.6e-166 S Alpha/beta hydrolase of unknown function (DUF915)
PKJOBBIB_02922 2.5e-234 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PKJOBBIB_02923 3.8e-117 XK27_12570 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PKJOBBIB_02924 2.8e-117 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PKJOBBIB_02925 8.8e-231 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PKJOBBIB_02926 2.9e-128 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
PKJOBBIB_02927 2.4e-153 M NlpC P60 family protein
PKJOBBIB_02930 3.2e-261 nox 1.6.3.4 C NADH oxidase
PKJOBBIB_02931 9e-161 sepS16B
PKJOBBIB_02932 4.3e-121
PKJOBBIB_02933 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PKJOBBIB_02934 6e-241 G Bacterial extracellular solute-binding protein
PKJOBBIB_02935 1.3e-85
PKJOBBIB_02936 0.0 strH 3.2.1.52 GH20 G Gram-positive signal peptide protein, YSIRK family
PKJOBBIB_02937 7.6e-28 L Transposase DDE domain
PKJOBBIB_02938 3e-61 K Transcriptional regulatory protein, C terminal
PKJOBBIB_02939 7.7e-179 T PhoQ Sensor
PKJOBBIB_02940 6.5e-21 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PKJOBBIB_02941 1e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02942 3.1e-24 kdpA 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit
PKJOBBIB_02943 2.1e-251 kdpB 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PKJOBBIB_02944 2.3e-166 kdpA 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PKJOBBIB_02945 3.1e-36 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_02946 3e-81 tnp2PF3 L Transposase DDE domain
PKJOBBIB_02947 5.9e-157 L hmm pf00665
PKJOBBIB_02948 7.3e-41 L 4.5 Transposon and IS
PKJOBBIB_02949 8.8e-80 manR K PRD domain
PKJOBBIB_02951 7.4e-27 2.7.1.200, 2.7.1.202 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PKJOBBIB_02952 4.6e-159 G PTS system sugar-specific permease component
PKJOBBIB_02953 5.9e-30 2.7.1.200 G Phosphotransferase system, galactitol-specific IIB component
PKJOBBIB_02954 5.5e-97 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PKJOBBIB_02955 3.6e-75 tpiA 5.3.1.1 G Triose-phosphate isomerase
PKJOBBIB_02956 6.1e-67 S Uncharacterised protein family UPF0047
PKJOBBIB_02957 1.4e-119 L Transposase and inactivated derivatives
PKJOBBIB_02958 2.1e-82 tnp2PF3 L Transposase DDE domain
PKJOBBIB_02959 1.9e-58 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_02960 4.6e-41 K UTRA domain
PKJOBBIB_02961 7.3e-67 agaB 2.7.1.191 K PTS system sorbose subfamily IIB component
PKJOBBIB_02962 1.6e-119 agaC G PTS system sorbose-specific iic component
PKJOBBIB_02963 2e-117 G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_02964 1.4e-29 G PTS system fructose IIA component
PKJOBBIB_02965 3.8e-232 L Transposase
PKJOBBIB_02966 0.0 3.2.1.3 GH15 G Belongs to the peptidase S8 family
PKJOBBIB_02967 3.7e-122 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_02969 1.3e-19
PKJOBBIB_02970 3e-23
PKJOBBIB_02971 8.6e-171 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PKJOBBIB_02972 4e-19
PKJOBBIB_02974 1.6e-98 D CobQ CobB MinD ParA nucleotide binding domain protein
PKJOBBIB_02975 6.6e-87 repA S Replication initiator protein A
PKJOBBIB_02986 1.2e-51 M Domain of unknown function (DUF5011)
PKJOBBIB_02987 8.1e-10 S Protein of unknown function (DUF3801)
PKJOBBIB_02988 2.8e-130 U TraM recognition site of TraD and TraG
PKJOBBIB_02989 1.4e-14
PKJOBBIB_02990 4.4e-43
PKJOBBIB_02991 2.3e-15 U PrgI family protein
PKJOBBIB_02992 2.1e-255 XK27_00545 U AAA-like domain
PKJOBBIB_02993 1.9e-41 3.2.1.96, 3.5.1.28 M Bacteriophage peptidoglycan hydrolase
PKJOBBIB_02996 4.3e-12
PKJOBBIB_02997 1.6e-60 L IrrE N-terminal-like domain
PKJOBBIB_03000 4.4e-09 pcfF S Bacterial mobilisation protein (MobC)
PKJOBBIB_03001 4.6e-100 U Relaxase/Mobilisation nuclease domain
PKJOBBIB_03002 3.4e-72 L Protein of unknown function (DUF3991)
PKJOBBIB_03003 1.5e-52 L Integrase core domain
PKJOBBIB_03004 1.8e-265 M Glycosyl transferase family group 2
PKJOBBIB_03005 1.9e-58 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_03006 1e-81 tnp2PF3 L Transposase DDE domain
PKJOBBIB_03007 2e-66 tcmJ G COG0662 Mannose-6-phosphate isomerase
PKJOBBIB_03008 1.3e-109 S Putative esterase
PKJOBBIB_03009 1.3e-220 2.7.1.211 G phosphotransferase system
PKJOBBIB_03010 1.8e-78 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PKJOBBIB_03011 6.4e-93 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PKJOBBIB_03012 4.2e-49 yleF K Helix-turn-helix domain, rpiR family
PKJOBBIB_03013 5.6e-30 treB G phosphotransferase system
PKJOBBIB_03014 4e-49 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PKJOBBIB_03015 1.3e-32 relB L RelB antitoxin
PKJOBBIB_03016 3.7e-43 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PKJOBBIB_03017 9.7e-177 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_03018 1.1e-107 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PKJOBBIB_03019 1.6e-79 repA S Replication initiator protein A (RepA) N-terminus
PKJOBBIB_03030 6.2e-154 L Uncharacterised protein family (UPF0236)
PKJOBBIB_03033 5.1e-53 M Domain of unknown function (DUF5011)
PKJOBBIB_03034 3.4e-08 S Protein of unknown function (DUF3801)
PKJOBBIB_03035 2.4e-129 U TraM recognition site of TraD and TraG
PKJOBBIB_03036 1.8e-14
PKJOBBIB_03037 1e-44
PKJOBBIB_03038 5e-15 U PrgI family protein
PKJOBBIB_03039 1.3e-255 XK27_00545 U AAA-like domain
PKJOBBIB_03040 8.4e-42 M Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PKJOBBIB_03043 8.8e-10
PKJOBBIB_03044 8.4e-62 L IrrE N-terminal-like domain
PKJOBBIB_03046 4.9e-08 pcfF S Bacterial mobilisation protein (MobC)
PKJOBBIB_03047 2.1e-100 U Relaxase/Mobilisation nuclease domain
PKJOBBIB_03048 1.8e-70 L Protein of unknown function (DUF3991)
PKJOBBIB_03049 3e-48 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_03050 2.1e-73 tnp2PF3 L Transposase DDE domain
PKJOBBIB_03051 6.4e-142 iunH 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PKJOBBIB_03052 3.3e-71 2.7.7.65 T phosphorelay sensor kinase activity
PKJOBBIB_03053 3e-46 L PFAM transposase, IS4 family protein
PKJOBBIB_03054 4.2e-15
PKJOBBIB_03055 9.4e-171 L Transposase DDE domain
PKJOBBIB_03056 4.6e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PKJOBBIB_03057 8e-42 S RelB antitoxin
PKJOBBIB_03058 1.6e-103 L Integrase
PKJOBBIB_03059 6.6e-41
PKJOBBIB_03060 1.8e-81 tnp2PF3 L Transposase DDE domain
PKJOBBIB_03061 2.4e-58 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_03062 2.6e-89 3.1.21.3 V Type I restriction modification DNA specificity domain
PKJOBBIB_03063 3.4e-23
PKJOBBIB_03064 4.1e-124 tnp L DDE domain
PKJOBBIB_03065 5.4e-175 pmi 5.3.1.8 G mannose-6-phosphate isomerase
PKJOBBIB_03066 7.7e-149 fosD G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_03067 1.6e-125 levC G PTS system sorbose-specific iic component
PKJOBBIB_03068 4.5e-88 levB 2.7.1.191 G PTS system sorbose subfamily IIB component
PKJOBBIB_03069 5.2e-69 2.7.1.191 G PTS system fructose IIA component
PKJOBBIB_03070 3.7e-131 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PKJOBBIB_03071 2.3e-136 yegW K UTRA
PKJOBBIB_03072 1.3e-125 tnp L DDE domain
PKJOBBIB_03073 1.6e-183 hsdM 2.1.1.72 V type I restriction-modification system
PKJOBBIB_03074 0.0 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PKJOBBIB_03075 2.5e-49 L Transposase DDE domain group 1
PKJOBBIB_03076 5.6e-34 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_03077 4.8e-34 L Transposase DDE domain group 1
PKJOBBIB_03078 7.2e-264 L Transposase DDE domain
PKJOBBIB_03080 4.4e-126 tnp L DDE domain
PKJOBBIB_03081 9.4e-46 ligA 6.5.1.2 L BRCA1 C Terminus (BRCT) domain
PKJOBBIB_03082 1.9e-113 L Resolvase, N terminal domain
PKJOBBIB_03083 1.5e-48 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PKJOBBIB_03084 3e-32 relB L RelB antitoxin
PKJOBBIB_03085 4.3e-45 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_03086 1.8e-252 K system fructose subfamily IIA component
PKJOBBIB_03087 5.8e-23 G PTS system fructose IIA component
PKJOBBIB_03088 9.3e-57 2.7.1.191 G IIB component
PKJOBBIB_03089 6.5e-100 G PTS system sorbose-specific iic component
PKJOBBIB_03090 8.8e-113 G PTS system mannose/fructose/sorbose family IID component
PKJOBBIB_03091 1.7e-184
PKJOBBIB_03092 1.6e-165 S Protein of unknown function (DUF2961)
PKJOBBIB_03093 6.9e-80 rpoN K Sigma-54 factor, core binding domain
PKJOBBIB_03094 3e-103 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PKJOBBIB_03095 1.6e-55 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PKJOBBIB_03096 4.5e-15 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PKJOBBIB_03098 4.4e-20
PKJOBBIB_03099 2.3e-23
PKJOBBIB_03100 9.1e-173 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PKJOBBIB_03101 1.3e-22
PKJOBBIB_03102 2.1e-57 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_03103 5.1e-81 tnp2PF3 L Transposase DDE domain
PKJOBBIB_03104 6.9e-181 scrR K Transcriptional regulator, LacI family
PKJOBBIB_03105 0.0 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
PKJOBBIB_03106 1.6e-165 gmuE 2.7.1.2, 2.7.1.4 GK ROK family
PKJOBBIB_03108 1.2e-110 F DNA/RNA non-specific endonuclease
PKJOBBIB_03111 9.1e-21
PKJOBBIB_03112 7.7e-10
PKJOBBIB_03113 1.4e-60
PKJOBBIB_03114 5.3e-70 L Protein of unknown function (DUF3991)
PKJOBBIB_03115 2.6e-103 U Relaxase/Mobilisation nuclease domain
PKJOBBIB_03116 9e-10 pcfF S Bacterial mobilisation protein (MobC)
PKJOBBIB_03118 2e-63 L IrrE N-terminal-like domain
PKJOBBIB_03119 1.3e-16
PKJOBBIB_03122 4.5e-43 3.2.1.96, 3.5.1.28 M Bacteriophage peptidoglycan hydrolase
PKJOBBIB_03123 1.1e-254 XK27_00545 U AAA-like domain
PKJOBBIB_03124 1.3e-15 U PrgI family protein
PKJOBBIB_03125 3.4e-43
PKJOBBIB_03126 1.8e-14
PKJOBBIB_03127 2.5e-128 U TraM recognition site of TraD and TraG
PKJOBBIB_03128 4.5e-08 S Protein of unknown function (DUF3801)
PKJOBBIB_03129 2.1e-51 M Domain of unknown function (DUF5011)
PKJOBBIB_03133 3.2e-12 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PKJOBBIB_03134 1.7e-49 M Cna B domain protein
PKJOBBIB_03135 1.4e-29 M Peptidase_C39 like family
PKJOBBIB_03143 3.8e-84 repA S Replication initiator protein A
PKJOBBIB_03144 2.3e-57 soj D AAA domain
PKJOBBIB_03146 1.5e-21
PKJOBBIB_03147 4.5e-172 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PKJOBBIB_03148 1.8e-23
PKJOBBIB_03149 5.9e-20
PKJOBBIB_03150 7.5e-188 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PKJOBBIB_03151 7.3e-236 L Transposase
PKJOBBIB_03152 3.5e-57 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PKJOBBIB_03153 3e-81 tnp2PF3 L Transposase DDE domain
PKJOBBIB_03155 1.1e-117 S Domain of unknown function DUF87
PKJOBBIB_03156 6.1e-91 S SIR2-like domain
PKJOBBIB_03157 1.5e-262 L helicase superfamily c-terminal domain
PKJOBBIB_03158 3.8e-298 V Type II restriction enzyme, methylase subunits
PKJOBBIB_03159 2.3e-178 L Transposase and inactivated derivatives, IS30 family
PKJOBBIB_03160 4.4e-58
PKJOBBIB_03161 5e-32 relB L RelB antitoxin
PKJOBBIB_03162 2e-48 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PKJOBBIB_03163 2e-115 L Resolvase, N terminal domain
PKJOBBIB_03164 9.4e-46 ligA 6.5.1.2 L BRCA1 C Terminus (BRCT) domain
PKJOBBIB_03165 1.1e-70 yqeB S Pyrimidine dimer DNA glycosylase
PKJOBBIB_03166 1.7e-69 pdxH S Pyridoxamine 5'-phosphate oxidase
PKJOBBIB_03167 1.1e-198 3.4.22.70 M Sortase family
PKJOBBIB_03168 8.1e-185 M LPXTG cell wall anchor motif
PKJOBBIB_03169 1e-125 M domain protein
PKJOBBIB_03170 0.0 yvcC M Cna protein B-type domain

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)