ORF_ID e_value Gene_name EC_number CAZy COGs Description
NDMBGMFH_00001 2.5e-234 S HipA-like C-terminal domain
NDMBGMFH_00002 5.8e-48
NDMBGMFH_00003 9.4e-60
NDMBGMFH_00004 2.9e-82
NDMBGMFH_00005 0.0 topB 5.99.1.2 L DNA topoisomerase
NDMBGMFH_00006 8.1e-108
NDMBGMFH_00007 3e-55
NDMBGMFH_00008 3.6e-41 S Protein of unknown function (DUF2442)
NDMBGMFH_00009 6.9e-52 S Bacterial mobilisation protein (MobC)
NDMBGMFH_00010 5.4e-279 ltrBE1 U Relaxase/Mobilisation nuclease domain
NDMBGMFH_00011 1.1e-163 S Protein of unknown function (DUF3801)
NDMBGMFH_00012 1.7e-284
NDMBGMFH_00014 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
NDMBGMFH_00015 3.2e-39
NDMBGMFH_00016 9.3e-31
NDMBGMFH_00017 0.0 U Type IV secretory system Conjugative DNA transfer
NDMBGMFH_00018 3e-09
NDMBGMFH_00019 2.4e-101 dam2 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
NDMBGMFH_00020 5.9e-101 K DNA binding
NDMBGMFH_00021 9.2e-124
NDMBGMFH_00022 3.6e-14 U Type IV secretory system Conjugative DNA transfer
NDMBGMFH_00023 1.5e-207 isp2 3.2.1.96 M CHAP domain
NDMBGMFH_00024 0.0 trsE U type IV secretory pathway VirB4
NDMBGMFH_00025 4e-62 S PrgI family protein
NDMBGMFH_00026 3.3e-139
NDMBGMFH_00027 8.9e-26
NDMBGMFH_00028 0.0 XK27_00515 D Cell surface antigen C-terminus
NDMBGMFH_00029 1e-158 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
NDMBGMFH_00030 8.2e-196 L Transposase and inactivated derivatives IS30 family
NDMBGMFH_00031 6.9e-19
NDMBGMFH_00032 2.3e-91
NDMBGMFH_00033 1.1e-241 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
NDMBGMFH_00034 5.2e-63 psp1 3.5.99.10 J Endoribonuclease L-PSP
NDMBGMFH_00035 2.9e-179 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
NDMBGMFH_00036 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
NDMBGMFH_00037 1.1e-305 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NDMBGMFH_00038 1.9e-81 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
NDMBGMFH_00039 3.2e-289 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
NDMBGMFH_00040 1.5e-239 hom 1.1.1.3 E Homoserine dehydrogenase
NDMBGMFH_00041 5.4e-189 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
NDMBGMFH_00042 5.2e-278 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
NDMBGMFH_00043 9.6e-62
NDMBGMFH_00044 6.1e-58
NDMBGMFH_00045 1.2e-163 V ATPases associated with a variety of cellular activities
NDMBGMFH_00046 1.4e-254 V Efflux ABC transporter, permease protein
NDMBGMFH_00047 2.2e-168 mdcF S Transporter, auxin efflux carrier (AEC) family protein
NDMBGMFH_00048 4.9e-240 dapE 3.5.1.18 E Peptidase dimerisation domain
NDMBGMFH_00049 0.0 rne 3.1.26.12 J Ribonuclease E/G family
NDMBGMFH_00050 3.2e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
NDMBGMFH_00051 3.1e-40 rpmA J Ribosomal L27 protein
NDMBGMFH_00052 1.1e-214 K Psort location Cytoplasmic, score
NDMBGMFH_00053 2.8e-174 L Transposase and inactivated derivatives IS30 family
NDMBGMFH_00054 1.1e-298 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NDMBGMFH_00055 1.5e-200 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NDMBGMFH_00056 6.9e-231 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
NDMBGMFH_00058 3.1e-31 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NDMBGMFH_00059 5.7e-123 nusG K Participates in transcription elongation, termination and antitermination
NDMBGMFH_00060 2.8e-173 plsC2 2.3.1.51 I Phosphate acyltransferases
NDMBGMFH_00061 2.1e-177 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NDMBGMFH_00062 9.8e-219 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
NDMBGMFH_00063 1.3e-201 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
NDMBGMFH_00064 0.0 3.2.1.97 GH101 G Glycosyl hydrolase 101 beta sandwich domain
NDMBGMFH_00065 6.9e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NDMBGMFH_00066 0.0 ftsK 2.7.11.1, 2.7.7.7, 3.4.21.110, 4.2.1.2 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NDMBGMFH_00067 4.3e-116
NDMBGMFH_00068 1.3e-162 T Pfam Adenylate and Guanylate cyclase catalytic domain
NDMBGMFH_00069 6.1e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
NDMBGMFH_00070 1.1e-79 ssb1 L Single-stranded DNA-binding protein
NDMBGMFH_00071 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NDMBGMFH_00072 6.6e-70 rplI J Binds to the 23S rRNA
NDMBGMFH_00074 1.9e-14 S Parallel beta-helix repeats
NDMBGMFH_00075 6.5e-46 S Parallel beta-helix repeats
NDMBGMFH_00076 1e-69 E Domain of unknown function (DUF5011)
NDMBGMFH_00078 3.7e-131 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
NDMBGMFH_00079 3.9e-129 M Protein of unknown function (DUF3152)
NDMBGMFH_00080 5.4e-186 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
NDMBGMFH_00081 2.2e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NDMBGMFH_00082 3.6e-53 acyP 3.6.1.7 C Acylphosphatase
NDMBGMFH_00083 0.0 inlJ M domain protein
NDMBGMFH_00084 2.2e-277 M LPXTG cell wall anchor motif
NDMBGMFH_00085 1.4e-212 3.4.22.70 M Sortase family
NDMBGMFH_00086 8.5e-60 S Domain of unknown function (DUF4854)
NDMBGMFH_00087 2.4e-155 fahA Q Fumarylacetoacetate (FAA) hydrolase family
NDMBGMFH_00088 2.5e-30 2.1.1.72 S Protein conserved in bacteria
NDMBGMFH_00089 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NDMBGMFH_00090 1.6e-132 M Mechanosensitive ion channel
NDMBGMFH_00091 1.7e-119 K Bacterial regulatory proteins, tetR family
NDMBGMFH_00092 5e-240 MA20_36090 S Psort location Cytoplasmic, score 8.87
NDMBGMFH_00093 1.2e-232 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
NDMBGMFH_00094 3.7e-16
NDMBGMFH_00097 3e-41 K Transcriptional regulator
NDMBGMFH_00098 0.0 fadD 6.2.1.3 I AMP-binding enzyme
NDMBGMFH_00099 3.5e-07 S Scramblase
NDMBGMFH_00100 3e-32
NDMBGMFH_00105 1.3e-12 tam 2.1.1.144, 2.1.1.197 S Methyltransferase domain
NDMBGMFH_00106 3.3e-236 K Helix-turn-helix XRE-family like proteins
NDMBGMFH_00107 3.7e-54 relB L RelB antitoxin
NDMBGMFH_00108 2.6e-17 T Toxic component of a toxin-antitoxin (TA) module
NDMBGMFH_00109 1.1e-130 K helix_turn_helix, mercury resistance
NDMBGMFH_00110 6.6e-243 yxiO S Vacuole effluxer Atg22 like
NDMBGMFH_00112 6.5e-201 yegV G pfkB family carbohydrate kinase
NDMBGMFH_00113 1.4e-29 rpmB J Ribosomal L28 family
NDMBGMFH_00114 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
NDMBGMFH_00115 1e-219 steT E amino acid
NDMBGMFH_00118 0.0
NDMBGMFH_00119 1e-245 U Sodium:dicarboxylate symporter family
NDMBGMFH_00120 5.8e-121 rsmD 2.1.1.171 L Conserved hypothetical protein 95
NDMBGMFH_00121 6.3e-108 XK27_02070 S Nitroreductase family
NDMBGMFH_00122 3.8e-81 hsp20 O Hsp20/alpha crystallin family
NDMBGMFH_00123 4.3e-162 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
NDMBGMFH_00124 1.3e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NDMBGMFH_00125 1.8e-34 CP_0960 S Belongs to the UPF0109 family
NDMBGMFH_00126 1e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
NDMBGMFH_00127 2.9e-295 ydfD EK Alanine-glyoxylate amino-transferase
NDMBGMFH_00128 1.3e-93 argO S LysE type translocator
NDMBGMFH_00129 2e-219 S Endonuclease/Exonuclease/phosphatase family
NDMBGMFH_00130 3.5e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NDMBGMFH_00131 1.4e-164 P Cation efflux family
NDMBGMFH_00132 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
NDMBGMFH_00133 2.3e-136 guaA1 6.3.5.2 F Peptidase C26
NDMBGMFH_00134 0.0 yjjK S ABC transporter
NDMBGMFH_00135 2e-58 S Protein of unknown function (DUF3039)
NDMBGMFH_00136 1e-81 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NDMBGMFH_00137 6.1e-107
NDMBGMFH_00138 2.3e-113 yceD S Uncharacterized ACR, COG1399
NDMBGMFH_00139 2.3e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
NDMBGMFH_00140 6.1e-140 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NDMBGMFH_00141 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
NDMBGMFH_00142 7.6e-92 ilvN 2.2.1.6 E ACT domain
NDMBGMFH_00145 7.5e-247 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NDMBGMFH_00146 2.1e-134 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NDMBGMFH_00147 8.2e-117 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NDMBGMFH_00148 2.4e-176 S Auxin Efflux Carrier
NDMBGMFH_00151 0.0 pgi 5.3.1.9 G Belongs to the GPI family
NDMBGMFH_00152 7.7e-156
NDMBGMFH_00153 6.6e-22
NDMBGMFH_00155 6.9e-201
NDMBGMFH_00157 5.5e-122 mgtC S MgtC family
NDMBGMFH_00158 0.0 mgtA 3.6.3.2 P Cation transporting ATPase, C-terminus
NDMBGMFH_00159 4.3e-275 abcT3 P ATPases associated with a variety of cellular activities
NDMBGMFH_00160 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
NDMBGMFH_00161 1.4e-173 K Putative sugar-binding domain
NDMBGMFH_00162 8.8e-213 gatC G PTS system sugar-specific permease component
NDMBGMFH_00163 1.5e-294 2.7.1.53 G FGGY family of carbohydrate kinases, C-terminal domain
NDMBGMFH_00164 3.1e-172 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
NDMBGMFH_00165 1.1e-129 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
NDMBGMFH_00166 5.6e-62 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NDMBGMFH_00167 7.6e-157 lepB 3.4.21.89 U Belongs to the peptidase S26 family
NDMBGMFH_00168 2.5e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NDMBGMFH_00169 3.9e-201 K helix_turn _helix lactose operon repressor
NDMBGMFH_00170 2.2e-10 fadD 6.2.1.3 I AMP-binding enzyme
NDMBGMFH_00171 0.0 fadD 6.2.1.3 I AMP-binding enzyme
NDMBGMFH_00172 6.9e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
NDMBGMFH_00173 1.3e-111 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
NDMBGMFH_00176 9.7e-299 G Glycosyl hydrolases family 43
NDMBGMFH_00177 2.6e-203 K helix_turn _helix lactose operon repressor
NDMBGMFH_00178 2.9e-170 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
NDMBGMFH_00179 1.7e-122 L Protein of unknown function (DUF1524)
NDMBGMFH_00180 2.9e-227 mntH P H( )-stimulated, divalent metal cation uptake system
NDMBGMFH_00181 1.8e-306 EGP Major facilitator Superfamily
NDMBGMFH_00182 1.6e-227
NDMBGMFH_00183 1.3e-179 S G5
NDMBGMFH_00184 1.5e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
NDMBGMFH_00185 2.8e-119 F Domain of unknown function (DUF4916)
NDMBGMFH_00186 6.9e-161 mhpC I Alpha/beta hydrolase family
NDMBGMFH_00187 2.4e-08 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
NDMBGMFH_00188 0.0 enhA_2 S L,D-transpeptidase catalytic domain
NDMBGMFH_00189 4.9e-72 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
NDMBGMFH_00190 7.7e-239 S Uncharacterized conserved protein (DUF2183)
NDMBGMFH_00191 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
NDMBGMFH_00192 2.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
NDMBGMFH_00193 9.9e-120 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
NDMBGMFH_00194 1.6e-134 glxR K helix_turn_helix, cAMP Regulatory protein
NDMBGMFH_00195 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
NDMBGMFH_00196 1.9e-219 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
NDMBGMFH_00197 6.7e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
NDMBGMFH_00198 3.1e-139 glpR K DeoR C terminal sensor domain
NDMBGMFH_00199 3.3e-252 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
NDMBGMFH_00200 9.9e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
NDMBGMFH_00201 8.6e-243 EGP Sugar (and other) transporter
NDMBGMFH_00202 4.2e-43 gcvR T Belongs to the UPF0237 family
NDMBGMFH_00203 9.4e-253 S UPF0210 protein
NDMBGMFH_00204 3.9e-73
NDMBGMFH_00206 6.3e-122 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NDMBGMFH_00207 2.5e-67 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G Putative cell wall binding repeat
NDMBGMFH_00208 1.7e-28 exsH 3.2.1.178, 3.2.1.18, 3.2.1.52 GH16,GH20,GH33 G Putative cell wall binding repeat
NDMBGMFH_00209 3e-184 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
NDMBGMFH_00210 2.1e-109
NDMBGMFH_00211 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NDMBGMFH_00212 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NDMBGMFH_00213 1.3e-96 T Forkhead associated domain
NDMBGMFH_00214 6.3e-68 B Belongs to the OprB family
NDMBGMFH_00215 1.5e-166 3.1.3.16 T Sigma factor PP2C-like phosphatases
NDMBGMFH_00216 0.0 E Transglutaminase-like superfamily
NDMBGMFH_00217 6.6e-227 S Protein of unknown function DUF58
NDMBGMFH_00218 2e-228 S ATPase family associated with various cellular activities (AAA)
NDMBGMFH_00219 0.0 S Fibronectin type 3 domain
NDMBGMFH_00220 7.5e-269 KLT Protein tyrosine kinase
NDMBGMFH_00221 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
NDMBGMFH_00222 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
NDMBGMFH_00223 4e-148 K -acetyltransferase
NDMBGMFH_00224 6.6e-257 G Major Facilitator Superfamily
NDMBGMFH_00225 2.9e-66 gsiA P ATPase activity
NDMBGMFH_00226 6.5e-43 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
NDMBGMFH_00227 2.7e-10 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
NDMBGMFH_00228 6.4e-24 relB L RelB antitoxin
NDMBGMFH_00229 5.5e-35 L Transposase
NDMBGMFH_00230 1e-132 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NDMBGMFH_00231 9.4e-161 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NDMBGMFH_00232 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NDMBGMFH_00233 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
NDMBGMFH_00234 1.7e-251 O Subtilase family
NDMBGMFH_00235 1.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NDMBGMFH_00236 2.6e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NDMBGMFH_00237 1.4e-270 S zinc finger
NDMBGMFH_00238 2.5e-101 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
NDMBGMFH_00239 2.9e-229 aspB E Aminotransferase class-V
NDMBGMFH_00240 2.3e-37 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
NDMBGMFH_00241 3.5e-132 tmp1 S Domain of unknown function (DUF4391)
NDMBGMFH_00242 2.6e-149 moeB 2.7.7.80 H ThiF family
NDMBGMFH_00243 1e-254 cdr OP Sulfurtransferase TusA
NDMBGMFH_00244 1e-179 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
NDMBGMFH_00247 1.1e-203 S Endonuclease/Exonuclease/phosphatase family
NDMBGMFH_00248 1.7e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NDMBGMFH_00249 5.5e-272 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NDMBGMFH_00250 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
NDMBGMFH_00251 2.5e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NDMBGMFH_00253 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
NDMBGMFH_00254 2.6e-166
NDMBGMFH_00255 1.4e-255 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
NDMBGMFH_00256 0.0 plyA3 3.2.1.18 GH33 M Parallel beta-helix repeats
NDMBGMFH_00258 1.1e-90 K MarR family
NDMBGMFH_00259 0.0 V ABC transporter, ATP-binding protein
NDMBGMFH_00260 0.0 V ABC transporter transmembrane region
NDMBGMFH_00261 8.8e-168 S Patatin-like phospholipase
NDMBGMFH_00262 4.6e-154 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
NDMBGMFH_00263 1.5e-169 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
NDMBGMFH_00264 2e-115 S Vitamin K epoxide reductase
NDMBGMFH_00265 3.9e-167 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
NDMBGMFH_00266 6.1e-32 S Protein of unknown function (DUF3107)
NDMBGMFH_00267 2.7e-237 mphA S Aminoglycoside phosphotransferase
NDMBGMFH_00268 6.9e-281 uvrD2 3.6.4.12 L DNA helicase
NDMBGMFH_00269 1.2e-288 S Zincin-like metallopeptidase
NDMBGMFH_00270 6.5e-151 lon T Belongs to the peptidase S16 family
NDMBGMFH_00271 5.7e-47 S Protein of unknown function (DUF3052)
NDMBGMFH_00272 5.2e-195 K helix_turn _helix lactose operon repressor
NDMBGMFH_00273 4e-60 S Thiamine-binding protein
NDMBGMFH_00274 1.2e-163 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
NDMBGMFH_00275 6.9e-231 O AAA domain (Cdc48 subfamily)
NDMBGMFH_00276 1.3e-84
NDMBGMFH_00277 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NDMBGMFH_00278 6.1e-160 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NDMBGMFH_00279 0.0 lacZ 3.2.1.23 G Domain of unknown function (DUF4982)
NDMBGMFH_00280 8.8e-300 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
NDMBGMFH_00281 2.8e-246 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NDMBGMFH_00282 7.3e-231 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NDMBGMFH_00283 4.3e-80 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
NDMBGMFH_00284 2.1e-42 yggT S YGGT family
NDMBGMFH_00285 9.7e-90 3.1.21.3 V DivIVA protein
NDMBGMFH_00286 4e-103 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NDMBGMFH_00287 5.8e-177 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
NDMBGMFH_00289 3.3e-61
NDMBGMFH_00290 5.2e-147 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
NDMBGMFH_00291 3.7e-202 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NDMBGMFH_00292 1e-188 ftsE D Cell division ATP-binding protein FtsE
NDMBGMFH_00293 2.4e-159 ftsX D Part of the ABC transporter FtsEX involved in cellular division
NDMBGMFH_00294 4.5e-160 usp 3.5.1.28 CBM50 D CHAP domain protein
NDMBGMFH_00295 3e-76 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NDMBGMFH_00296 1.5e-146 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
NDMBGMFH_00298 3.2e-90
NDMBGMFH_00299 4.7e-14
NDMBGMFH_00300 1.4e-12 L PFAM Integrase catalytic
NDMBGMFH_00302 9.7e-201 2.7.11.1 NU Tfp pilus assembly protein FimV
NDMBGMFH_00303 5.2e-223 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
NDMBGMFH_00304 3.9e-235 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NDMBGMFH_00305 1.2e-291 I acetylesterase activity
NDMBGMFH_00306 4.3e-141 recO L Involved in DNA repair and RecF pathway recombination
NDMBGMFH_00307 5.3e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NDMBGMFH_00308 5.1e-192 ywqG S Domain of unknown function (DUF1963)
NDMBGMFH_00309 1.7e-15 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
NDMBGMFH_00310 8.8e-39 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
NDMBGMFH_00311 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
NDMBGMFH_00312 7.6e-106 S zinc-ribbon domain
NDMBGMFH_00313 2e-46 yhbY J CRS1_YhbY
NDMBGMFH_00314 0.0 4.2.1.53 S MCRA family
NDMBGMFH_00316 3.4e-202 K WYL domain
NDMBGMFH_00317 5e-156 yvgN 1.1.1.346 S Aldo/keto reductase family
NDMBGMFH_00318 6.4e-173 dkgA 1.1.1.346 C Aldo/keto reductase family
NDMBGMFH_00319 1.2e-76 yneG S Domain of unknown function (DUF4186)
NDMBGMFH_00321 2.3e-181 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
NDMBGMFH_00322 3.2e-256 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NDMBGMFH_00323 2.1e-224 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NDMBGMFH_00324 3.2e-112 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
NDMBGMFH_00325 1.7e-112
NDMBGMFH_00326 1.8e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NDMBGMFH_00327 4.9e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
NDMBGMFH_00328 1.2e-282 S Uncharacterized protein conserved in bacteria (DUF2252)
NDMBGMFH_00329 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
NDMBGMFH_00330 1.7e-249 S Domain of unknown function (DUF5067)
NDMBGMFH_00331 1.1e-57 EGP Major facilitator Superfamily
NDMBGMFH_00332 1.4e-176 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
NDMBGMFH_00333 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
NDMBGMFH_00334 1.4e-121 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
NDMBGMFH_00335 3.6e-171
NDMBGMFH_00336 3.1e-273 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NDMBGMFH_00337 4.6e-177 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
NDMBGMFH_00338 1.2e-166 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NDMBGMFH_00339 7.5e-129 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NDMBGMFH_00340 2.2e-50 M Lysin motif
NDMBGMFH_00341 2.3e-83 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NDMBGMFH_00342 1.7e-229 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NDMBGMFH_00343 0.0 L DNA helicase
NDMBGMFH_00344 1.3e-90 mraZ K Belongs to the MraZ family
NDMBGMFH_00345 9.2e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NDMBGMFH_00346 9.7e-64 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NDMBGMFH_00347 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
NDMBGMFH_00348 2.8e-180 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NDMBGMFH_00349 9.9e-283 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NDMBGMFH_00350 3.6e-202 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NDMBGMFH_00351 2.3e-265 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NDMBGMFH_00352 4e-224 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
NDMBGMFH_00353 5.5e-217 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NDMBGMFH_00354 2.9e-293 murC 6.3.2.8 M Belongs to the MurCDEF family
NDMBGMFH_00355 5.2e-149 ftsQ 6.3.2.4 D Cell division protein FtsQ
NDMBGMFH_00356 1.3e-37
NDMBGMFH_00358 1e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NDMBGMFH_00359 4.4e-236 G Major Facilitator Superfamily
NDMBGMFH_00360 5.6e-169 2.7.1.4 G pfkB family carbohydrate kinase
NDMBGMFH_00361 1.3e-224 GK ROK family
NDMBGMFH_00362 3.4e-132 cutC P Participates in the control of copper homeostasis
NDMBGMFH_00363 3.5e-216 GK ROK family
NDMBGMFH_00364 6.6e-153 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NDMBGMFH_00365 1.6e-243 nagA 3.5.1.25 G Amidohydrolase family
NDMBGMFH_00366 1.5e-305 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
NDMBGMFH_00367 6.7e-185 dppB EP Binding-protein-dependent transport system inner membrane component
NDMBGMFH_00368 1.9e-190 dppC EP Binding-protein-dependent transport system inner membrane component
NDMBGMFH_00369 0.0 P Belongs to the ABC transporter superfamily
NDMBGMFH_00370 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
NDMBGMFH_00371 4.3e-97 3.6.1.55 F NUDIX domain
NDMBGMFH_00373 4.7e-283 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
NDMBGMFH_00374 0.0 smc D Required for chromosome condensation and partitioning
NDMBGMFH_00375 7.4e-129 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
NDMBGMFH_00376 5.5e-244 yxbA 6.3.1.12 S ATP-grasp
NDMBGMFH_00377 3.1e-231 2.6.1.33 M DegT/DnrJ/EryC1/StrS aminotransferase family
NDMBGMFH_00378 1.5e-191 V Acetyltransferase (GNAT) domain
NDMBGMFH_00379 2.2e-296 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NDMBGMFH_00380 2.1e-114 sigH K Belongs to the sigma-70 factor family. ECF subfamily
NDMBGMFH_00381 2e-64
NDMBGMFH_00382 1.4e-194 galM 5.1.3.3 G Aldose 1-epimerase
NDMBGMFH_00383 5.5e-178 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NDMBGMFH_00385 2.1e-91 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NDMBGMFH_00386 1e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NDMBGMFH_00387 2.3e-133 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
NDMBGMFH_00388 2.3e-08 S Spermine/spermidine synthase domain
NDMBGMFH_00390 1.4e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NDMBGMFH_00391 2.1e-25 rpmI J Ribosomal protein L35
NDMBGMFH_00392 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NDMBGMFH_00393 9.2e-178 xerD D recombinase XerD
NDMBGMFH_00394 7e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
NDMBGMFH_00395 3.2e-150 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NDMBGMFH_00396 5.4e-113 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NDMBGMFH_00397 1.1e-149 nrtR 3.6.1.55 F NUDIX hydrolase
NDMBGMFH_00398 9.8e-252 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
NDMBGMFH_00399 0.0 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
NDMBGMFH_00400 7e-164 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
NDMBGMFH_00401 4.4e-236 iscS1 2.8.1.7 E Aminotransferase class-V
NDMBGMFH_00402 0.0 typA T Elongation factor G C-terminus
NDMBGMFH_00403 9.9e-81
NDMBGMFH_00404 5e-198 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
NDMBGMFH_00405 2.4e-192 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
NDMBGMFH_00406 7.3e-42
NDMBGMFH_00407 1.6e-185 xerC D Belongs to the 'phage' integrase family. XerC subfamily
NDMBGMFH_00408 3.9e-176 appB EP Binding-protein-dependent transport system inner membrane component
NDMBGMFH_00409 1.3e-165 dppC EP N-terminal TM domain of oligopeptide transport permease C
NDMBGMFH_00410 0.0 oppD P Belongs to the ABC transporter superfamily
NDMBGMFH_00411 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
NDMBGMFH_00412 5.2e-262 pepC 3.4.22.40 E Peptidase C1-like family
NDMBGMFH_00413 1.1e-169 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
NDMBGMFH_00414 3.2e-139 S Protein of unknown function (DUF3710)
NDMBGMFH_00415 6.1e-124 S Protein of unknown function (DUF3159)
NDMBGMFH_00416 2.9e-248 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NDMBGMFH_00417 2.3e-110
NDMBGMFH_00418 0.0 ctpE P E1-E2 ATPase
NDMBGMFH_00419 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NDMBGMFH_00421 1.1e-166 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
NDMBGMFH_00422 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
NDMBGMFH_00423 1.1e-53 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NDMBGMFH_00424 4.2e-220 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NDMBGMFH_00425 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NDMBGMFH_00426 3.2e-135 3.8.1.2 S Haloacid dehalogenase-like hydrolase
NDMBGMFH_00427 5.6e-183 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NDMBGMFH_00428 1.1e-136 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
NDMBGMFH_00429 0.0 arc O AAA ATPase forming ring-shaped complexes
NDMBGMFH_00430 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
NDMBGMFH_00431 3e-161 hisN 3.1.3.25 G Inositol monophosphatase family
NDMBGMFH_00432 1.6e-10 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
NDMBGMFH_00433 8.5e-276 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
NDMBGMFH_00434 8.1e-42 hup L Belongs to the bacterial histone-like protein family
NDMBGMFH_00435 0.0 S Lysylphosphatidylglycerol synthase TM region
NDMBGMFH_00436 3e-281 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
NDMBGMFH_00437 4.4e-291 S PGAP1-like protein
NDMBGMFH_00439 2.7e-74
NDMBGMFH_00440 1.6e-148 S von Willebrand factor (vWF) type A domain
NDMBGMFH_00441 2.2e-188 S von Willebrand factor (vWF) type A domain
NDMBGMFH_00442 6.4e-94
NDMBGMFH_00443 3.7e-174 S Protein of unknown function DUF58
NDMBGMFH_00444 5e-196 moxR S ATPase family associated with various cellular activities (AAA)
NDMBGMFH_00445 2.5e-144 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NDMBGMFH_00446 3.4e-71 S LytR cell envelope-related transcriptional attenuator
NDMBGMFH_00447 2.2e-44 cspA K 'Cold-shock' DNA-binding domain
NDMBGMFH_00448 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NDMBGMFH_00449 1.7e-10 S Proteins of 100 residues with WXG
NDMBGMFH_00450 4.9e-162
NDMBGMFH_00451 1.6e-134 KT Response regulator receiver domain protein
NDMBGMFH_00452 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NDMBGMFH_00453 1e-66 cspB K 'Cold-shock' DNA-binding domain
NDMBGMFH_00454 1.6e-202 S Protein of unknown function (DUF3027)
NDMBGMFH_00455 4.7e-185 uspA T Belongs to the universal stress protein A family
NDMBGMFH_00456 0.0 clpC O ATPase family associated with various cellular activities (AAA)
NDMBGMFH_00460 1.5e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
NDMBGMFH_00461 3.3e-250 hisS 6.1.1.21 J Histidyl-tRNA synthetase
NDMBGMFH_00462 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NDMBGMFH_00463 1e-73 K helix_turn_helix, Lux Regulon
NDMBGMFH_00464 6.5e-90 S Aminoacyl-tRNA editing domain
NDMBGMFH_00465 3.6e-140 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
NDMBGMFH_00466 9.5e-147 gluB ET Belongs to the bacterial solute-binding protein 3 family
NDMBGMFH_00467 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
NDMBGMFH_00468 4.8e-199 gluD E Binding-protein-dependent transport system inner membrane component
NDMBGMFH_00469 6e-194 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
NDMBGMFH_00470 0.0 L DEAD DEAH box helicase
NDMBGMFH_00471 2.2e-257 rarA L Recombination factor protein RarA
NDMBGMFH_00473 1.2e-256 EGP Major facilitator Superfamily
NDMBGMFH_00474 0.0 ecfA GP ABC transporter, ATP-binding protein
NDMBGMFH_00475 1.1e-104 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NDMBGMFH_00476 1.3e-139 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
NDMBGMFH_00477 1.7e-212 E Aminotransferase class I and II
NDMBGMFH_00478 4.9e-137 bioM P ATPases associated with a variety of cellular activities
NDMBGMFH_00479 2.3e-71 2.8.2.22 S Arylsulfotransferase Ig-like domain
NDMBGMFH_00480 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NDMBGMFH_00481 0.0 S Tetratricopeptide repeat
NDMBGMFH_00482 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NDMBGMFH_00483 6.3e-210 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
NDMBGMFH_00484 8.8e-161 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
NDMBGMFH_00485 7.3e-247 int L Phage integrase, N-terminal SAM-like domain
NDMBGMFH_00491 2.5e-194 L Phage integrase family
NDMBGMFH_00493 6.3e-26 S Bifunctional DNA primase/polymerase, N-terminal
NDMBGMFH_00495 9.6e-208 2.1.1.72 H Adenine-specific methyltransferase EcoRI
NDMBGMFH_00496 1.8e-188 2.7.11.1 KLT Protein tyrosine kinase
NDMBGMFH_00497 3.8e-48 S Psort location Cytoplasmic, score 8.87
NDMBGMFH_00499 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
NDMBGMFH_00500 1.1e-302 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
NDMBGMFH_00502 6.2e-75 3.1.21.3 V Type I restriction modification DNA specificity domain
NDMBGMFH_00503 2.4e-74 casA L CRISPR system CASCADE complex protein CasA
NDMBGMFH_00504 8.2e-41
NDMBGMFH_00505 2e-86 int L Phage integrase, N-terminal SAM-like domain
NDMBGMFH_00506 4.8e-115 L DNA restriction-modification system
NDMBGMFH_00507 5.1e-32 3.1.21.4 L Recognizes the double-stranded sequence CTCGAG and cleaves after C-1
NDMBGMFH_00508 5.2e-79 S GIY-YIG catalytic domain
NDMBGMFH_00512 5.5e-33 traSA D DNA segregation ATPase FtsK SpoIIIE
NDMBGMFH_00514 4.7e-10
NDMBGMFH_00515 1.8e-286 glnA 6.3.1.2 E glutamine synthetase
NDMBGMFH_00516 9.4e-144 S Domain of unknown function (DUF4191)
NDMBGMFH_00517 5.2e-281 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NDMBGMFH_00518 1.2e-103 S Protein of unknown function (DUF3043)
NDMBGMFH_00519 1.2e-258 argE E Peptidase dimerisation domain
NDMBGMFH_00520 1.7e-191 V N-Acetylmuramoyl-L-alanine amidase
NDMBGMFH_00521 1.4e-142 ytrE V ATPases associated with a variety of cellular activities
NDMBGMFH_00522 2e-197
NDMBGMFH_00523 2.6e-228 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
NDMBGMFH_00524 0.0 S Uncharacterised protein family (UPF0182)
NDMBGMFH_00525 8.1e-207 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
NDMBGMFH_00526 0.0 2.7.8.14, 2.7.8.47 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
NDMBGMFH_00527 1.6e-216 I transferase activity, transferring acyl groups other than amino-acyl groups
NDMBGMFH_00529 4.1e-130 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
NDMBGMFH_00530 1.9e-197 GM GDP-mannose 4,6 dehydratase
NDMBGMFH_00531 6.1e-151 GM ABC-2 type transporter
NDMBGMFH_00532 4.9e-145 tagH 3.6.3.38, 3.6.3.40 GM ABC transporter
NDMBGMFH_00533 2.7e-97 2.3.1.183 M Acetyltransferase (GNAT) domain
NDMBGMFH_00534 7.6e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NDMBGMFH_00535 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NDMBGMFH_00536 1.7e-295 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH chorismate binding enzyme
NDMBGMFH_00537 6.4e-153 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 E branched-chain-amino-acid transaminase activity
NDMBGMFH_00538 6.9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NDMBGMFH_00539 1.6e-100 divIC D Septum formation initiator
NDMBGMFH_00540 2.6e-106 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
NDMBGMFH_00541 2.6e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
NDMBGMFH_00543 1.8e-96
NDMBGMFH_00544 8.8e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
NDMBGMFH_00545 2.2e-72 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
NDMBGMFH_00546 7.5e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NDMBGMFH_00549 1e-107
NDMBGMFH_00550 2e-142 yplQ S Haemolysin-III related
NDMBGMFH_00551 7.3e-286 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NDMBGMFH_00552 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
NDMBGMFH_00553 0.0 D FtsK/SpoIIIE family
NDMBGMFH_00554 1.6e-269 K Cell envelope-related transcriptional attenuator domain
NDMBGMFH_00555 5.8e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
NDMBGMFH_00556 0.0 S Glycosyl transferase, family 2
NDMBGMFH_00557 5.9e-264
NDMBGMFH_00558 6.3e-66 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
NDMBGMFH_00559 3.4e-157 cof 5.2.1.8 T Eukaryotic phosphomannomutase
NDMBGMFH_00560 7.7e-129 ctsW S Phosphoribosyl transferase domain
NDMBGMFH_00561 3.6e-72 rulA 3.4.21.88 KT Peptidase S24-like
NDMBGMFH_00562 4.3e-203 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NDMBGMFH_00563 1.9e-127 T Response regulator receiver domain protein
NDMBGMFH_00564 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NDMBGMFH_00565 5.1e-102 carD K CarD-like/TRCF domain
NDMBGMFH_00566 4.2e-83 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
NDMBGMFH_00567 4.3e-139 znuB U ABC 3 transport family
NDMBGMFH_00568 1.8e-164 znuC P ATPases associated with a variety of cellular activities
NDMBGMFH_00569 9.6e-173 P Zinc-uptake complex component A periplasmic
NDMBGMFH_00570 1.8e-164 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NDMBGMFH_00571 6.8e-241 rpsA J Ribosomal protein S1
NDMBGMFH_00572 2.7e-106 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NDMBGMFH_00573 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NDMBGMFH_00574 1.7e-179 terC P Integral membrane protein, TerC family
NDMBGMFH_00575 2.5e-272 pyk 2.7.1.40 G Pyruvate kinase
NDMBGMFH_00576 3.3e-109 aspA 3.6.1.13 L NUDIX domain
NDMBGMFH_00578 9.2e-120 pdtaR T Response regulator receiver domain protein
NDMBGMFH_00579 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NDMBGMFH_00580 6.5e-173 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
NDMBGMFH_00581 6.5e-120 3.6.1.13 L NUDIX domain
NDMBGMFH_00582 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
NDMBGMFH_00583 1.5e-218 ykiI
NDMBGMFH_00585 5.5e-135 L Phage integrase family
NDMBGMFH_00586 2.9e-108 3.4.13.21 E Peptidase family S51
NDMBGMFH_00587 2.9e-276 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
NDMBGMFH_00588 1.3e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NDMBGMFH_00589 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
NDMBGMFH_00590 1e-281 XK27_07020 S Domain of unknown function (DUF1846)
NDMBGMFH_00591 1.7e-122
NDMBGMFH_00593 9.9e-112 ysdA S Protein of unknown function (DUF1294)
NDMBGMFH_00594 1.2e-27
NDMBGMFH_00595 4.4e-51
NDMBGMFH_00597 1.1e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
NDMBGMFH_00598 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
NDMBGMFH_00599 3.4e-189 pit P Phosphate transporter family
NDMBGMFH_00600 1.1e-115 MA20_27875 P Protein of unknown function DUF47
NDMBGMFH_00601 1.7e-120 K helix_turn_helix, Lux Regulon
NDMBGMFH_00602 2.1e-233 T Histidine kinase
NDMBGMFH_00603 9.9e-42 pacL 3.6.3.8, 3.6.3.9 P ATPase, P-type transporting, HAD superfamily, subfamily IC
NDMBGMFH_00604 2e-183 V ATPases associated with a variety of cellular activities
NDMBGMFH_00605 8.1e-227 V ABC-2 family transporter protein
NDMBGMFH_00606 1.1e-251 V ABC-2 family transporter protein
NDMBGMFH_00607 5.9e-285 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
NDMBGMFH_00608 1.1e-45
NDMBGMFH_00609 6e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
NDMBGMFH_00610 1.5e-69 S Protein of unknown function (DUF4235)
NDMBGMFH_00611 1.8e-138 G Phosphoglycerate mutase family
NDMBGMFH_00612 1e-190 K Psort location Cytoplasmic, score
NDMBGMFH_00613 0.0 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
NDMBGMFH_00614 0.0 dnaK O Heat shock 70 kDa protein
NDMBGMFH_00615 1.4e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NDMBGMFH_00616 2.4e-173 dnaJ1 O DnaJ molecular chaperone homology domain
NDMBGMFH_00617 6.8e-87 hspR K transcriptional regulator, MerR family
NDMBGMFH_00618 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR repeat-like domain
NDMBGMFH_00619 0.0 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR Asp-box repeat
NDMBGMFH_00620 4.7e-140 S HAD hydrolase, family IA, variant 3
NDMBGMFH_00622 5.9e-126 dedA S SNARE associated Golgi protein
NDMBGMFH_00623 4.6e-172 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NDMBGMFH_00624 8.6e-59
NDMBGMFH_00625 1.6e-130
NDMBGMFH_00626 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NDMBGMFH_00627 8.9e-87 K Transcriptional regulator
NDMBGMFH_00629 3.5e-274 xylR 5.3.1.12 G MFS/sugar transport protein
NDMBGMFH_00630 5.9e-185 tatD L TatD related DNase
NDMBGMFH_00631 0.0 kup P Transport of potassium into the cell
NDMBGMFH_00632 1.6e-165 S Glutamine amidotransferase domain
NDMBGMFH_00633 1.9e-138 T HD domain
NDMBGMFH_00634 5.6e-186 V ABC transporter
NDMBGMFH_00635 1e-249 V ABC transporter permease
NDMBGMFH_00636 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
NDMBGMFH_00637 0.0 S Psort location Cytoplasmic, score 8.87
NDMBGMFH_00638 7e-164 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
NDMBGMFH_00639 4.3e-26 thiS 2.8.1.10 H ThiS family
NDMBGMFH_00640 1.7e-276
NDMBGMFH_00641 1.1e-208 S Glycosyltransferase, group 2 family protein
NDMBGMFH_00642 2.8e-28 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NDMBGMFH_00643 1.4e-47 cbiM P PDGLE domain
NDMBGMFH_00644 5.9e-92
NDMBGMFH_00645 1.6e-221 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
NDMBGMFH_00646 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NDMBGMFH_00648 7.7e-129 cpaE D bacterial-type flagellum organization
NDMBGMFH_00649 3.4e-191 cpaF U Type II IV secretion system protein
NDMBGMFH_00650 5.1e-122 U Type ii secretion system
NDMBGMFH_00651 8.3e-15 gspF NU Type II secretion system (T2SS), protein F
NDMBGMFH_00652 3.2e-15 gspF NU Type II secretion system (T2SS), protein F
NDMBGMFH_00653 1.9e-41 S Protein of unknown function (DUF4244)
NDMBGMFH_00654 6.9e-57 S TIGRFAM helicase secretion neighborhood TadE-like protein
NDMBGMFH_00655 4.1e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
NDMBGMFH_00656 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
NDMBGMFH_00657 6.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NDMBGMFH_00658 5.3e-136 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
NDMBGMFH_00659 1.8e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
NDMBGMFH_00661 6.5e-212 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NDMBGMFH_00662 1.7e-116
NDMBGMFH_00663 4e-273 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
NDMBGMFH_00664 1.3e-19 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
NDMBGMFH_00665 1e-278 S Calcineurin-like phosphoesterase
NDMBGMFH_00666 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NDMBGMFH_00667 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
NDMBGMFH_00668 2.4e-233 glf 5.4.99.9 M UDP-galactopyranose mutase
NDMBGMFH_00669 1.2e-121 yplQ S Haemolysin-III related
NDMBGMFH_00670 0.0 vpr M PA domain
NDMBGMFH_00671 7.2e-190 3.6.1.27 I PAP2 superfamily
NDMBGMFH_00672 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NDMBGMFH_00673 4.8e-118 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NDMBGMFH_00674 1.4e-212 holB 2.7.7.7 L DNA polymerase III
NDMBGMFH_00675 2.4e-198 K helix_turn _helix lactose operon repressor
NDMBGMFH_00676 1.9e-37 ptsH G PTS HPr component phosphorylation site
NDMBGMFH_00677 3.6e-291 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NDMBGMFH_00678 4.4e-61 S Fic/DOC family
NDMBGMFH_00679 1.7e-198 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NDMBGMFH_00680 6.9e-23 G MFS/sugar transport protein
NDMBGMFH_00681 1.5e-306 efeU_1 P Iron permease FTR1 family
NDMBGMFH_00682 1.8e-106 tpd P Fe2+ transport protein
NDMBGMFH_00683 1.6e-233 S Predicted membrane protein (DUF2318)
NDMBGMFH_00684 9.7e-223 macB_2 V ABC transporter permease
NDMBGMFH_00685 1.1e-202 Z012_06715 V FtsX-like permease family
NDMBGMFH_00686 5.7e-149 macB V ABC transporter, ATP-binding protein
NDMBGMFH_00687 1.3e-70 S FMN_bind
NDMBGMFH_00688 3.6e-131 yydK K UTRA
NDMBGMFH_00689 1.6e-10 S haloacid dehalogenase-like hydrolase
NDMBGMFH_00690 2.9e-69 S haloacid dehalogenase-like hydrolase
NDMBGMFH_00691 7.3e-250 gmuC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NDMBGMFH_00692 1.2e-48 celA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
NDMBGMFH_00693 1.7e-38 celC 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
NDMBGMFH_00694 1.2e-295 bglA 3.2.1.86 GT1 G Glycosyl hydrolase family 1
NDMBGMFH_00695 8.9e-34 Q phosphatase activity
NDMBGMFH_00696 7e-81
NDMBGMFH_00697 3e-240 S Putative ABC-transporter type IV
NDMBGMFH_00698 2.1e-162 S Sucrose-6F-phosphate phosphohydrolase
NDMBGMFH_00700 2e-180 3.4.22.70 M Sortase family
NDMBGMFH_00701 5.1e-204 M chlorophyll binding
NDMBGMFH_00702 7.6e-197 M chlorophyll binding
NDMBGMFH_00703 5.8e-305 M LPXTG cell wall anchor motif
NDMBGMFH_00704 2.7e-82 K Winged helix DNA-binding domain
NDMBGMFH_00705 1.8e-301 V ABC transporter, ATP-binding protein
NDMBGMFH_00706 0.0 V ABC transporter transmembrane region
NDMBGMFH_00707 2e-82
NDMBGMFH_00708 7.4e-68 XK26_04485 P Cobalt transport protein
NDMBGMFH_00709 2.9e-19 XK26_04485 P Cobalt transport protein
NDMBGMFH_00710 5.4e-11 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
NDMBGMFH_00711 9.2e-305 pepD E Peptidase family C69
NDMBGMFH_00712 0.0 S Glycosyl hydrolases related to GH101 family, GH129
NDMBGMFH_00713 4.3e-197 XK27_01805 M Glycosyltransferase like family 2
NDMBGMFH_00714 1.2e-116 icaR K Bacterial regulatory proteins, tetR family
NDMBGMFH_00716 5.3e-202 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NDMBGMFH_00717 3.4e-220 amt U Ammonium Transporter Family
NDMBGMFH_00718 1e-54 glnB K Nitrogen regulatory protein P-II
NDMBGMFH_00719 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
NDMBGMFH_00720 1.4e-251 dinF V MatE
NDMBGMFH_00721 7.5e-258 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
NDMBGMFH_00722 3.5e-283 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
NDMBGMFH_00723 7.5e-143 cobQ S CobB/CobQ-like glutamine amidotransferase domain
NDMBGMFH_00724 3.5e-19 S granule-associated protein
NDMBGMFH_00725 0.0 ubiB S ABC1 family
NDMBGMFH_00726 0.0 pacS 3.6.3.54 P E1-E2 ATPase
NDMBGMFH_00727 9.6e-43 csoR S Metal-sensitive transcriptional repressor
NDMBGMFH_00728 3.4e-199 rmuC S RmuC family
NDMBGMFH_00729 5.9e-129 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NDMBGMFH_00730 6.9e-156 spoU 2.1.1.185 J RNA methyltransferase TrmH family
NDMBGMFH_00731 3.3e-40 V ABC transporter
NDMBGMFH_00732 2.5e-81 V ABC transporter
NDMBGMFH_00733 6.2e-48 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NDMBGMFH_00734 3.5e-288 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NDMBGMFH_00735 1.4e-286 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NDMBGMFH_00736 9.6e-197 2.3.1.57 J Acetyltransferase (GNAT) domain
NDMBGMFH_00737 2.5e-52 S Protein of unknown function (DUF2469)
NDMBGMFH_00738 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
NDMBGMFH_00739 0.0 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NDMBGMFH_00740 1e-234 E Aminotransferase class I and II
NDMBGMFH_00741 2.4e-90 lrp_3 K helix_turn_helix ASNC type
NDMBGMFH_00742 4.7e-73 tyrA 5.4.99.5 E Chorismate mutase type II
NDMBGMFH_00743 0.0 S domain protein
NDMBGMFH_00744 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NDMBGMFH_00745 4.3e-294 E Bacterial extracellular solute-binding proteins, family 5 Middle
NDMBGMFH_00746 3.9e-121 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NDMBGMFH_00747 4.8e-134 KT Transcriptional regulatory protein, C terminal
NDMBGMFH_00748 1.4e-125
NDMBGMFH_00749 3.2e-101 mntP P Probably functions as a manganese efflux pump
NDMBGMFH_00751 5.2e-92 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NDMBGMFH_00752 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
NDMBGMFH_00753 0.0 K RNA polymerase II activating transcription factor binding
NDMBGMFH_00754 4.6e-35
NDMBGMFH_00756 4.1e-208 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NDMBGMFH_00757 1.7e-145 atpB C it plays a direct role in the translocation of protons across the membrane
NDMBGMFH_00759 1.2e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NDMBGMFH_00760 4.6e-62 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NDMBGMFH_00761 1.4e-150 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NDMBGMFH_00762 0.0 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NDMBGMFH_00763 2.7e-166 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NDMBGMFH_00764 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NDMBGMFH_00765 8.7e-50 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
NDMBGMFH_00766 2.3e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
NDMBGMFH_00767 5.9e-146 QT PucR C-terminal helix-turn-helix domain
NDMBGMFH_00768 0.0
NDMBGMFH_00769 9.9e-152 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
NDMBGMFH_00770 4.2e-93 bioY S BioY family
NDMBGMFH_00771 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
NDMBGMFH_00772 7.2e-308 pccB I Carboxyl transferase domain
NDMBGMFH_00773 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
NDMBGMFH_00774 3.2e-98 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NDMBGMFH_00775 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
NDMBGMFH_00777 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
NDMBGMFH_00778 4e-119
NDMBGMFH_00779 3e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NDMBGMFH_00780 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
NDMBGMFH_00781 2.6e-151 xylR K purine nucleotide biosynthetic process
NDMBGMFH_00782 2.3e-41 K purine nucleotide biosynthetic process
NDMBGMFH_00783 3.7e-94 lemA S LemA family
NDMBGMFH_00784 0.0 S Predicted membrane protein (DUF2207)
NDMBGMFH_00785 9.2e-74 megL 2.5.1.48, 4.4.1.1, 4.4.1.11, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
NDMBGMFH_00786 1.8e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NDMBGMFH_00788 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NDMBGMFH_00789 1.5e-98 nrdI F Probably involved in ribonucleotide reductase function
NDMBGMFH_00790 2.2e-41 nrdH O Glutaredoxin
NDMBGMFH_00791 4.6e-168 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
NDMBGMFH_00792 3.6e-94 L Transposase and inactivated derivatives IS30 family
NDMBGMFH_00793 0.0 yegQ O Peptidase family U32 C-terminal domain
NDMBGMFH_00794 1.2e-188 yfiH Q Multi-copper polyphenol oxidoreductase laccase
NDMBGMFH_00795 6.5e-145 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
NDMBGMFH_00796 8e-128 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
NDMBGMFH_00797 3.3e-54 D nuclear chromosome segregation
NDMBGMFH_00798 1.6e-268 pepC 3.4.22.40 E Peptidase C1-like family
NDMBGMFH_00799 4.2e-168 L Excalibur calcium-binding domain
NDMBGMFH_00800 7.4e-219 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NDMBGMFH_00801 1.9e-245 EGP Major facilitator Superfamily
NDMBGMFH_00802 9.7e-109 K helix_turn_helix, Arsenical Resistance Operon Repressor
NDMBGMFH_00803 1.7e-240 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NDMBGMFH_00804 8.7e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NDMBGMFH_00805 4.2e-245 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
NDMBGMFH_00806 3.7e-128 KT Transcriptional regulatory protein, C terminal
NDMBGMFH_00807 2.3e-172 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
NDMBGMFH_00808 3.8e-171 pstC P probably responsible for the translocation of the substrate across the membrane
NDMBGMFH_00809 6.2e-180 pstA P Phosphate transport system permease
NDMBGMFH_00810 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NDMBGMFH_00811 3e-170 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
NDMBGMFH_00812 1.4e-12 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
NDMBGMFH_00813 8.8e-222 pbuO S Permease family
NDMBGMFH_00815 0.0 guxA1 3.2.1.18, 3.2.1.91 GH33,GH6 G BNR repeat-like domain
NDMBGMFH_00816 9.6e-186 xynB2 1.1.1.169 E lipolytic protein G-D-S-L family
NDMBGMFH_00817 8.1e-88 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NDMBGMFH_00818 1.3e-37 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NDMBGMFH_00820 3.8e-240 T Forkhead associated domain
NDMBGMFH_00821 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
NDMBGMFH_00822 9.6e-42
NDMBGMFH_00823 5.6e-110 flgA NO SAF
NDMBGMFH_00824 3.2e-38 fmdB S Putative regulatory protein
NDMBGMFH_00825 2e-120 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
NDMBGMFH_00826 7.6e-148 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
NDMBGMFH_00827 2e-141
NDMBGMFH_00828 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NDMBGMFH_00829 2.1e-132 bla1 3.5.2.6 V Beta-lactamase enzyme family
NDMBGMFH_00830 1.2e-51 moxR S ATPase family associated with various cellular activities (AAA)
NDMBGMFH_00834 1.9e-25 rpmG J Ribosomal protein L33
NDMBGMFH_00835 6.9e-215 murB 1.3.1.98 M Cell wall formation
NDMBGMFH_00836 9e-61 fdxA C 4Fe-4S binding domain
NDMBGMFH_00837 3.2e-225 dapC E Aminotransferase class I and II
NDMBGMFH_00838 7.8e-241 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NDMBGMFH_00840 3.6e-257 M Bacterial capsule synthesis protein PGA_cap
NDMBGMFH_00841 1.1e-113 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
NDMBGMFH_00842 7.4e-119
NDMBGMFH_00843 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
NDMBGMFH_00844 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NDMBGMFH_00845 8.8e-68 rpsI J Belongs to the universal ribosomal protein uS9 family
NDMBGMFH_00846 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
NDMBGMFH_00847 6.3e-232 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
NDMBGMFH_00848 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
NDMBGMFH_00849 8.7e-167 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
NDMBGMFH_00850 1.7e-96 ywiC S YwiC-like protein
NDMBGMFH_00851 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
NDMBGMFH_00852 4.2e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NDMBGMFH_00853 1.1e-118 rplD J Forms part of the polypeptide exit tunnel
NDMBGMFH_00854 2.6e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NDMBGMFH_00855 4.2e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NDMBGMFH_00856 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NDMBGMFH_00857 4.3e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NDMBGMFH_00858 7.5e-96 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NDMBGMFH_00859 5.8e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NDMBGMFH_00860 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
NDMBGMFH_00861 3.5e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NDMBGMFH_00862 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NDMBGMFH_00863 3.5e-52 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NDMBGMFH_00864 2.2e-102 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NDMBGMFH_00865 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NDMBGMFH_00866 4.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NDMBGMFH_00867 2.1e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NDMBGMFH_00868 1.1e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NDMBGMFH_00869 1.5e-100 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NDMBGMFH_00870 1e-24 rpmD J Ribosomal protein L30p/L7e
NDMBGMFH_00871 2.7e-63 rplO J binds to the 23S rRNA
NDMBGMFH_00872 4.7e-249 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NDMBGMFH_00873 3.8e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NDMBGMFH_00874 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NDMBGMFH_00875 6.5e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
NDMBGMFH_00876 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NDMBGMFH_00877 1.1e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NDMBGMFH_00878 8.9e-184 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NDMBGMFH_00879 8.1e-64 rplQ J Ribosomal protein L17
NDMBGMFH_00880 0.0 3.2.1.52 GH20 G hydrolase family 20, catalytic
NDMBGMFH_00881 6.4e-173 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NDMBGMFH_00882 0.0 gcs2 S A circularly permuted ATPgrasp
NDMBGMFH_00883 1.3e-153 E Transglutaminase/protease-like homologues
NDMBGMFH_00885 1.1e-145 L Transposase and inactivated derivatives
NDMBGMFH_00886 7.6e-164
NDMBGMFH_00887 2.8e-188 nusA K Participates in both transcription termination and antitermination
NDMBGMFH_00888 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NDMBGMFH_00889 4.7e-84 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NDMBGMFH_00890 1.6e-238 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NDMBGMFH_00891 5.9e-233 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
NDMBGMFH_00892 6.1e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NDMBGMFH_00893 8e-106
NDMBGMFH_00895 5.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NDMBGMFH_00896 9.2e-203 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NDMBGMFH_00897 0.0 nagH 3.2.1.35, 3.2.1.52 GH20 G beta-N-acetylglucosaminidase
NDMBGMFH_00898 3.4e-261 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NDMBGMFH_00899 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
NDMBGMFH_00901 2.7e-43 M Spy0128-like isopeptide containing domain
NDMBGMFH_00902 4.4e-42 M Spy0128-like isopeptide containing domain
NDMBGMFH_00903 0.0 crr G pts system, glucose-specific IIABC component
NDMBGMFH_00904 7.6e-152 arbG K CAT RNA binding domain
NDMBGMFH_00905 2.5e-214 I Diacylglycerol kinase catalytic domain
NDMBGMFH_00906 0.0 nucH 3.1.3.5 F 5'-nucleotidase, C-terminal domain
NDMBGMFH_00907 3.3e-229 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NDMBGMFH_00909 0.0 nagLU 3.1.4.53, 3.2.1.21, 3.2.1.50 GH3 G Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain
NDMBGMFH_00911 5.3e-95
NDMBGMFH_00912 0.0 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NDMBGMFH_00913 3.6e-185 opcA G Glucose-6-phosphate dehydrogenase subunit
NDMBGMFH_00914 3.9e-142 pgl 3.1.1.31 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
NDMBGMFH_00915 5.3e-278 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NDMBGMFH_00916 8.5e-126 degU K helix_turn_helix, Lux Regulon
NDMBGMFH_00917 6.7e-265 tcsS3 KT PspC domain
NDMBGMFH_00918 2e-295 pspC KT PspC domain
NDMBGMFH_00919 1.2e-127
NDMBGMFH_00920 1.5e-112 S Protein of unknown function (DUF4125)
NDMBGMFH_00921 0.0 S Domain of unknown function (DUF4037)
NDMBGMFH_00922 4.3e-217 araJ EGP Major facilitator Superfamily
NDMBGMFH_00924 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
NDMBGMFH_00925 4.3e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
NDMBGMFH_00926 4.9e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NDMBGMFH_00927 1.7e-117 phoU P Plays a role in the regulation of phosphate uptake
NDMBGMFH_00928 2.9e-216 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NDMBGMFH_00929 2.6e-39
NDMBGMFH_00930 8.5e-215 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NDMBGMFH_00931 1.4e-179 usp 3.5.1.28 CBM50 S CHAP domain
NDMBGMFH_00932 1.2e-106 M NlpC/P60 family
NDMBGMFH_00933 1.6e-191 T Universal stress protein family
NDMBGMFH_00934 3.8e-72 attW O OsmC-like protein
NDMBGMFH_00935 1.9e-174 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NDMBGMFH_00936 4.6e-128 folA 1.5.1.3 H dihydrofolate reductase
NDMBGMFH_00937 4e-95 ptpA 3.1.3.48 T low molecular weight
NDMBGMFH_00938 2.2e-196 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
NDMBGMFH_00939 3.2e-45 azlD E Branched-chain amino acid transport protein (AzlD)
NDMBGMFH_00940 1.3e-111 vex2 V ABC transporter, ATP-binding protein
NDMBGMFH_00941 7.5e-209 vex1 V Efflux ABC transporter, permease protein
NDMBGMFH_00942 4.7e-220 vex3 V ABC transporter permease
NDMBGMFH_00943 1.6e-11 S Psort location CytoplasmicMembrane, score 9.99
NDMBGMFH_00944 5.4e-181 lacR K Transcriptional regulator, LacI family
NDMBGMFH_00945 2.4e-59 nagA 3.5.1.25 G Amidohydrolase family
NDMBGMFH_00946 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NDMBGMFH_00947 1.7e-268 lacS G Psort location CytoplasmicMembrane, score 10.00
NDMBGMFH_00948 8.6e-17 S Transcription factor WhiB
NDMBGMFH_00950 7e-155 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NDMBGMFH_00951 1.2e-199 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NDMBGMFH_00952 2.6e-68 S Domain of unknown function (DUF4190)
NDMBGMFH_00955 8.1e-205 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
NDMBGMFH_00956 1.9e-177 3.4.14.13 M Glycosyltransferase like family 2
NDMBGMFH_00957 4.6e-275 S AI-2E family transporter
NDMBGMFH_00958 1.3e-232 epsG M Glycosyl transferase family 21
NDMBGMFH_00959 1.7e-168 natA V ATPases associated with a variety of cellular activities
NDMBGMFH_00960 3.4e-310
NDMBGMFH_00961 3.7e-263 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
NDMBGMFH_00962 3.5e-213 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NDMBGMFH_00963 9.4e-98 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NDMBGMFH_00964 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NDMBGMFH_00965 4.5e-100 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
NDMBGMFH_00966 6.2e-165 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NDMBGMFH_00967 2.1e-293 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NDMBGMFH_00968 1.3e-77 S Protein of unknown function (DUF3180)
NDMBGMFH_00969 7.1e-172 tesB I Thioesterase-like superfamily
NDMBGMFH_00970 0.0 3.2.1.52, 3.2.1.83 GH16,GH20 G hydrolase family 20, catalytic
NDMBGMFH_00971 0.0 yjjK S ATP-binding cassette protein, ChvD family
NDMBGMFH_00972 2.1e-45 T response regulator
NDMBGMFH_00973 2.5e-43 K response regulator
NDMBGMFH_00974 1.2e-97 S Domain of unknown function (DUF4825)
NDMBGMFH_00976 3.2e-25 fic D Fic/DOC family
NDMBGMFH_00977 5.6e-67 fic D Fic/DOC family
NDMBGMFH_00978 2e-07
NDMBGMFH_00979 1.4e-89 S Protein of unknown function (DUF3990)
NDMBGMFH_00980 2.8e-37 S Protein of unknown function (DUF3791)
NDMBGMFH_00981 9.6e-15 M domain, Protein
NDMBGMFH_00982 1.3e-162 M domain, Protein
NDMBGMFH_00983 5.7e-126
NDMBGMFH_00984 6.7e-116 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
NDMBGMFH_00985 4.4e-18 S Protein of unknown function (DUF979)
NDMBGMFH_00986 1.7e-48 S DUF218 domain
NDMBGMFH_00988 6.5e-116 S Pyridoxamine 5'-phosphate oxidase
NDMBGMFH_00989 1.3e-159 I alpha/beta hydrolase fold
NDMBGMFH_00990 3.8e-57 EGP Major facilitator Superfamily
NDMBGMFH_00991 6.1e-304 S ATPases associated with a variety of cellular activities
NDMBGMFH_00992 3.7e-179 glkA 2.7.1.2 G ROK family
NDMBGMFH_00993 5.9e-77 EGP Major facilitator superfamily
NDMBGMFH_00994 9.3e-36 1.1.1.122, 1.1.1.65 C Aldo/keto reductase family
NDMBGMFH_00995 3.4e-252 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
NDMBGMFH_00996 4.4e-216 MA20_36090 S Psort location Cytoplasmic, score 8.87
NDMBGMFH_00997 3.5e-28 L Transposase
NDMBGMFH_00999 1.8e-148 S Sulfite exporter TauE/SafE
NDMBGMFH_01000 6.6e-52 V FtsX-like permease family
NDMBGMFH_01002 4.2e-164 EG EamA-like transporter family
NDMBGMFH_01003 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
NDMBGMFH_01004 1.2e-141 3.5.2.6 V Beta-lactamase enzyme family
NDMBGMFH_01005 3.1e-169 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
NDMBGMFH_01006 4.8e-129 S Metallo-beta-lactamase domain protein
NDMBGMFH_01007 3.8e-106
NDMBGMFH_01008 7.1e-258 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
NDMBGMFH_01009 9.8e-178 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, C-terminal alpha/beta domain
NDMBGMFH_01010 2.6e-163 glcU G Sugar transport protein
NDMBGMFH_01011 6.2e-196 K helix_turn_helix, arabinose operon control protein
NDMBGMFH_01013 3.9e-36 rpmE J Binds the 23S rRNA
NDMBGMFH_01014 1.2e-189 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NDMBGMFH_01015 3.2e-186 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NDMBGMFH_01016 1e-49 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
NDMBGMFH_01017 5.2e-116 ywlC 2.7.7.87 J Belongs to the SUA5 family
NDMBGMFH_01018 8e-192 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
NDMBGMFH_01019 4.1e-289 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
NDMBGMFH_01020 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
NDMBGMFH_01021 2.1e-71 KT Transcriptional regulatory protein, C terminal
NDMBGMFH_01022 2.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
NDMBGMFH_01023 1.1e-158 supH S Sucrose-6F-phosphate phosphohydrolase
NDMBGMFH_01024 1.5e-269 recD2 3.6.4.12 L PIF1-like helicase
NDMBGMFH_01026 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NDMBGMFH_01027 2.4e-170
NDMBGMFH_01028 4.6e-120 L Single-strand binding protein family
NDMBGMFH_01029 0.0 pepO 3.4.24.71 O Peptidase family M13
NDMBGMFH_01030 8.8e-122 S Short repeat of unknown function (DUF308)
NDMBGMFH_01031 1.1e-149 map 3.4.11.18 E Methionine aminopeptidase
NDMBGMFH_01032 1.1e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
NDMBGMFH_01033 5.1e-101 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
NDMBGMFH_01034 1.6e-196 yghZ C Aldo/keto reductase family
NDMBGMFH_01035 1.7e-79 EGP Major Facilitator Superfamily
NDMBGMFH_01036 3.6e-93 K acetyltransferase
NDMBGMFH_01037 0.0 ctpE P E1-E2 ATPase
NDMBGMFH_01038 0.0 macB_2 V ATPases associated with a variety of cellular activities
NDMBGMFH_01039 5.3e-226 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
NDMBGMFH_01040 6.2e-260 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
NDMBGMFH_01041 4e-234 metC 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
NDMBGMFH_01042 3.5e-241 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
NDMBGMFH_01043 1.4e-127 XK27_08050 O prohibitin homologues
NDMBGMFH_01044 3e-273 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
NDMBGMFH_01045 3.8e-55 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
NDMBGMFH_01046 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NDMBGMFH_01047 2.5e-309 L DEAD-like helicases superfamily
NDMBGMFH_01048 1.9e-102 cas5d S CRISPR-associated protein (Cas_Cas5)
NDMBGMFH_01049 2.5e-245 csd1 S CRISPR-associated protein (Cas_Csd1)
NDMBGMFH_01050 1.3e-149 cas7c L CRISPR-associated protein Cas7
NDMBGMFH_01051 2e-110 cas4 3.1.12.1 L Domain of unknown function DUF83
NDMBGMFH_01052 5.8e-178 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NDMBGMFH_01053 8.4e-42 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NDMBGMFH_01055 0.0 3.2.1.51 GH29 G Alpha-L-fucosidase
NDMBGMFH_01056 1.4e-17 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NDMBGMFH_01057 2.9e-190 K Periplasmic binding protein domain
NDMBGMFH_01058 7.6e-126 G ABC transporter permease
NDMBGMFH_01059 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NDMBGMFH_01060 3.3e-62 G carbohydrate transport
NDMBGMFH_01061 8.8e-278 G Bacterial extracellular solute-binding protein
NDMBGMFH_01062 3.6e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NDMBGMFH_01063 4.6e-310 E ABC transporter, substrate-binding protein, family 5
NDMBGMFH_01064 1.9e-170 P Binding-protein-dependent transport system inner membrane component
NDMBGMFH_01065 5.8e-164 EP Binding-protein-dependent transport system inner membrane component
NDMBGMFH_01066 1.7e-140 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
NDMBGMFH_01067 4.4e-155 sapF E ATPases associated with a variety of cellular activities
NDMBGMFH_01068 5.4e-189 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NDMBGMFH_01070 1.3e-78
NDMBGMFH_01071 1.2e-64 D MobA/MobL family
NDMBGMFH_01072 2.8e-46 L Transposase
NDMBGMFH_01073 5.4e-175 tnp7109-21 L Integrase core domain
NDMBGMFH_01074 1.1e-26 2.1.1.72 S Adenine-specific methyltransferase EcoRI
NDMBGMFH_01075 2.4e-40
NDMBGMFH_01076 5.6e-112 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
NDMBGMFH_01078 1.4e-46 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NDMBGMFH_01080 2.8e-241 pbuX F Permease family
NDMBGMFH_01081 3e-107 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NDMBGMFH_01082 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
NDMBGMFH_01083 0.0 pcrA 3.6.4.12 L DNA helicase
NDMBGMFH_01084 8.2e-64 S Domain of unknown function (DUF4418)
NDMBGMFH_01085 1.9e-212 V FtsX-like permease family
NDMBGMFH_01086 8.2e-127 lolD V ABC transporter
NDMBGMFH_01087 1e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NDMBGMFH_01088 0.0 oatA I Psort location CytoplasmicMembrane, score 9.99
NDMBGMFH_01089 4.8e-135 pgm3 G Phosphoglycerate mutase family
NDMBGMFH_01090 3.8e-64 WQ51_05790 S Bacterial protein of unknown function (DUF948)
NDMBGMFH_01091 1.1e-36
NDMBGMFH_01092 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NDMBGMFH_01093 3e-75 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NDMBGMFH_01094 7.1e-188 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NDMBGMFH_01095 1.3e-47 3.4.23.43 S Type IV leader peptidase family
NDMBGMFH_01096 6e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NDMBGMFH_01097 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NDMBGMFH_01098 2.2e-78 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
NDMBGMFH_01099 3.4e-15
NDMBGMFH_01100 1.7e-120 K helix_turn_helix, Lux Regulon
NDMBGMFH_01101 2.6e-07 3.4.22.70 M Sortase family
NDMBGMFH_01102 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NDMBGMFH_01103 1.1e-289 sufB O FeS assembly protein SufB
NDMBGMFH_01104 4.4e-233 sufD O FeS assembly protein SufD
NDMBGMFH_01105 1.1e-144 sufC O FeS assembly ATPase SufC
NDMBGMFH_01106 7.7e-241 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NDMBGMFH_01107 8.8e-101 iscU C SUF system FeS assembly protein, NifU family
NDMBGMFH_01108 1.2e-108 yitW S Iron-sulfur cluster assembly protein
NDMBGMFH_01109 4.7e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NDMBGMFH_01110 4e-164 spoU 2.1.1.185 J SpoU rRNA Methylase family
NDMBGMFH_01112 2.1e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NDMBGMFH_01113 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
NDMBGMFH_01114 5.8e-197 phoH T PhoH-like protein
NDMBGMFH_01115 7.4e-100 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NDMBGMFH_01116 2.7e-250 corC S CBS domain
NDMBGMFH_01117 3.3e-186 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NDMBGMFH_01118 0.0 fadD 6.2.1.3 I AMP-binding enzyme
NDMBGMFH_01119 1.1e-201 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
NDMBGMFH_01120 4.4e-44 pntA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
NDMBGMFH_01121 2.3e-233 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
NDMBGMFH_01122 9.7e-191 S alpha beta
NDMBGMFH_01123 3.1e-94 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NDMBGMFH_01124 1.8e-225 ilvE 2.6.1.42 E Amino-transferase class IV
NDMBGMFH_01125 2.1e-75 3.1.4.37 T RNA ligase
NDMBGMFH_01126 4.4e-135 S UPF0126 domain
NDMBGMFH_01127 9.9e-34 rpsT J Binds directly to 16S ribosomal RNA
NDMBGMFH_01128 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NDMBGMFH_01129 6.9e-243 hemN H Involved in the biosynthesis of porphyrin-containing compound
NDMBGMFH_01130 8.8e-13 S Membrane
NDMBGMFH_01131 2.4e-292 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
NDMBGMFH_01132 0.0 tetP J Elongation factor G, domain IV
NDMBGMFH_01133 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
NDMBGMFH_01134 3.8e-303 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NDMBGMFH_01135 3.6e-82
NDMBGMFH_01136 5.1e-245 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
NDMBGMFH_01137 5.7e-163 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
NDMBGMFH_01138 1.7e-151 ybeM S Carbon-nitrogen hydrolase
NDMBGMFH_01139 7e-53 S Sel1-like repeats.
NDMBGMFH_01140 2.6e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NDMBGMFH_01141 1.4e-60 S Short C-terminal domain
NDMBGMFH_01142 5.3e-124 L Transposase
NDMBGMFH_01143 1.6e-28
NDMBGMFH_01144 2.7e-220 L Uncharacterized conserved protein (DUF2075)
NDMBGMFH_01145 4.2e-29
NDMBGMFH_01146 8.3e-81 rarD 3.4.17.13 E Rard protein
NDMBGMFH_01147 1.4e-23 rarD S EamA-like transporter family
NDMBGMFH_01148 3e-178 I alpha/beta hydrolase fold
NDMBGMFH_01149 7.4e-208 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
NDMBGMFH_01150 3.4e-100 sixA T Phosphoglycerate mutase family
NDMBGMFH_01151 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NDMBGMFH_01152 1.6e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
NDMBGMFH_01154 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
NDMBGMFH_01155 5.4e-181 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
NDMBGMFH_01156 2e-73 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
NDMBGMFH_01157 1.1e-280 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NDMBGMFH_01158 3.4e-180 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
NDMBGMFH_01159 6.5e-156 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
NDMBGMFH_01160 2.1e-179 pyrD 1.3.1.14 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NDMBGMFH_01161 6.5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NDMBGMFH_01162 1e-16 K MerR family regulatory protein
NDMBGMFH_01163 6.9e-195 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
NDMBGMFH_01164 1e-146
NDMBGMFH_01165 1.3e-16 K Psort location Cytoplasmic, score
NDMBGMFH_01166 9.1e-16 KLT Protein tyrosine kinase
NDMBGMFH_01167 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NDMBGMFH_01168 4.8e-241 vbsD V MatE
NDMBGMFH_01169 3.6e-131 S Enoyl-(Acyl carrier protein) reductase
NDMBGMFH_01170 5.1e-133 magIII L endonuclease III
NDMBGMFH_01171 3.4e-94 laaE K Transcriptional regulator PadR-like family
NDMBGMFH_01172 1.8e-176 S Membrane transport protein
NDMBGMFH_01173 1.7e-68 4.1.1.44 S Cupin domain
NDMBGMFH_01174 7.7e-224 hipA 2.7.11.1 S HipA N-terminal domain
NDMBGMFH_01175 3.7e-41 K Helix-turn-helix
NDMBGMFH_01176 3.1e-49 tam 2.1.1.144, 2.1.1.197 FG trans-aconitate 2-methyltransferase activity
NDMBGMFH_01177 5.4e-19
NDMBGMFH_01178 1.9e-101 K Bacterial regulatory proteins, tetR family
NDMBGMFH_01179 2.2e-90 T Domain of unknown function (DUF4234)
NDMBGMFH_01180 1.2e-171 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
NDMBGMFH_01181 1.5e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
NDMBGMFH_01182 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NDMBGMFH_01183 4e-144 4.1.1.44 S Carboxymuconolactone decarboxylase family
NDMBGMFH_01184 9.7e-61 dkgB S Oxidoreductase, aldo keto reductase family protein
NDMBGMFH_01186 3e-289 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
NDMBGMFH_01187 0.0 pafB K WYL domain
NDMBGMFH_01188 1e-51
NDMBGMFH_01189 0.0 helY L DEAD DEAH box helicase
NDMBGMFH_01190 3e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
NDMBGMFH_01191 7.3e-143 pgp 3.1.3.18 S HAD-hyrolase-like
NDMBGMFH_01194 6.2e-90 K Putative zinc ribbon domain
NDMBGMFH_01195 2.1e-125 S GyrI-like small molecule binding domain
NDMBGMFH_01196 3.3e-24 L DNA integration
NDMBGMFH_01197 2.5e-15
NDMBGMFH_01198 4.3e-62
NDMBGMFH_01199 8e-120 K helix_turn_helix, mercury resistance
NDMBGMFH_01200 9.6e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
NDMBGMFH_01201 2.9e-140 S Bacterial protein of unknown function (DUF881)
NDMBGMFH_01202 2.6e-31 sbp S Protein of unknown function (DUF1290)
NDMBGMFH_01203 4e-173 S Bacterial protein of unknown function (DUF881)
NDMBGMFH_01204 1e-116 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NDMBGMFH_01205 1.8e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
NDMBGMFH_01206 6.4e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
NDMBGMFH_01207 6.3e-101 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
NDMBGMFH_01208 4.8e-190 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NDMBGMFH_01209 2.4e-161 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
NDMBGMFH_01210 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
NDMBGMFH_01211 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
NDMBGMFH_01212 7.5e-146 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NDMBGMFH_01213 1.8e-103 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
NDMBGMFH_01214 5.7e-30
NDMBGMFH_01215 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
NDMBGMFH_01216 2.1e-244
NDMBGMFH_01217 1.4e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NDMBGMFH_01218 1.9e-225 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
NDMBGMFH_01219 5.5e-101 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NDMBGMFH_01220 2.6e-44 yajC U Preprotein translocase subunit
NDMBGMFH_01221 1.8e-201 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NDMBGMFH_01222 2.5e-104 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NDMBGMFH_01223 1.8e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NDMBGMFH_01224 1e-131 yebC K transcriptional regulatory protein
NDMBGMFH_01225 0.0 3.2.1.52 GH20 M Glycosyl hydrolase family 20, catalytic domain
NDMBGMFH_01226 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NDMBGMFH_01227 2.2e-250 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NDMBGMFH_01230 5.9e-259
NDMBGMFH_01234 3.7e-156 S PAC2 family
NDMBGMFH_01235 5e-168 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
NDMBGMFH_01236 7.1e-160 G Fructosamine kinase
NDMBGMFH_01237 3.4e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NDMBGMFH_01238 4.1e-218 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NDMBGMFH_01239 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
NDMBGMFH_01240 1e-201 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NDMBGMFH_01241 1.2e-143 yoaK S Protein of unknown function (DUF1275)
NDMBGMFH_01242 7.5e-253 brnQ U Component of the transport system for branched-chain amino acids
NDMBGMFH_01245 3.1e-243 mepA_6 V MatE
NDMBGMFH_01246 6.1e-162 S Sucrose-6F-phosphate phosphohydrolase
NDMBGMFH_01247 9.1e-178 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
NDMBGMFH_01248 8e-33 secG U Preprotein translocase SecG subunit
NDMBGMFH_01249 5.3e-147 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NDMBGMFH_01250 2e-222 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
NDMBGMFH_01251 3.1e-173 whiA K May be required for sporulation
NDMBGMFH_01252 3.4e-177 rapZ S Displays ATPase and GTPase activities
NDMBGMFH_01253 3e-181 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
NDMBGMFH_01254 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NDMBGMFH_01255 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NDMBGMFH_01256 2.1e-77
NDMBGMFH_01257 3.1e-58 V MacB-like periplasmic core domain
NDMBGMFH_01259 3.3e-118 K Transcriptional regulatory protein, C terminal
NDMBGMFH_01260 3.7e-239 qseC 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NDMBGMFH_01261 7.2e-138 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
NDMBGMFH_01262 2.6e-302 ybiT S ABC transporter
NDMBGMFH_01263 8.5e-198 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NDMBGMFH_01264 1.1e-307 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
NDMBGMFH_01265 4.8e-207 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
NDMBGMFH_01266 6.4e-218 GK ROK family
NDMBGMFH_01267 1.1e-178 2.7.1.2 GK ROK family
NDMBGMFH_01268 2.7e-243 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
NDMBGMFH_01269 4e-242 rgpD 3.6.3.38, 3.6.3.40 GM ABC transporter, ATP-binding protein
NDMBGMFH_01270 1.4e-153 rgpC U Transport permease protein
NDMBGMFH_01271 1e-206 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NDMBGMFH_01272 1e-265 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
NDMBGMFH_01273 4.1e-172 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NDMBGMFH_01274 3.7e-38 L Transposase
NDMBGMFH_01275 2.5e-11 L Transposase
NDMBGMFH_01276 3.2e-22
NDMBGMFH_01277 8.9e-45 L transposase activity
NDMBGMFH_01278 1.7e-53 tnp7109-21 L Integrase core domain
NDMBGMFH_01279 9.7e-45 tnp7109-21 L Integrase core domain
NDMBGMFH_01280 1.5e-106
NDMBGMFH_01281 2.8e-196 M Glycosyltransferase like family 2
NDMBGMFH_01282 1.5e-103 L PFAM Integrase catalytic
NDMBGMFH_01283 1.8e-150 L IstB-like ATP binding protein
NDMBGMFH_01284 4.1e-144 L IstB-like ATP binding protein
NDMBGMFH_01285 1.7e-298 L PFAM Integrase catalytic
NDMBGMFH_01286 4e-161 L PFAM Integrase catalytic
NDMBGMFH_01287 2.3e-26 L PFAM Integrase catalytic
NDMBGMFH_01288 3e-81 L PFAM Integrase catalytic
NDMBGMFH_01289 7.5e-82 L transposase activity
NDMBGMFH_01290 2.6e-73 1.1.1.339 GM NAD dependent epimerase/dehydratase family
NDMBGMFH_01291 7.1e-192 I Acyltransferase family
NDMBGMFH_01292 0.0 rgpF M Rhamnan synthesis protein F
NDMBGMFH_01293 6.3e-273 S Polysaccharide pyruvyl transferase
NDMBGMFH_01294 6.3e-280 S Glucosyl transferase GtrII
NDMBGMFH_01295 1.6e-41 L PFAM Integrase catalytic
NDMBGMFH_01296 1.9e-42 L PFAM Integrase catalytic
NDMBGMFH_01297 4.8e-127 L PFAM Integrase catalytic
NDMBGMFH_01298 4.1e-127 L PFAM Integrase catalytic
NDMBGMFH_01299 4.7e-124 L IstB-like ATP binding protein
NDMBGMFH_01300 1.2e-137 tnp7109-21 L Integrase core domain
NDMBGMFH_01301 3.5e-185 yfdH 2.4.2.53 GT2 M Glycosyltransferase like family 2
NDMBGMFH_01302 0.0 lytC 2.1.1.197, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
NDMBGMFH_01303 1.7e-25 I transferase activity, transferring acyl groups other than amino-acyl groups
NDMBGMFH_01304 2.1e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NDMBGMFH_01305 2.7e-111 T protein histidine kinase activity
NDMBGMFH_01306 1e-47 S Protein of unknown function (DUF3073)
NDMBGMFH_01307 6.5e-204 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
NDMBGMFH_01308 1.8e-195 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
NDMBGMFH_01309 5.2e-17 S Amidohydrolase family
NDMBGMFH_01310 1.1e-155 S Amidohydrolase family
NDMBGMFH_01311 0.0 yjjP S Threonine/Serine exporter, ThrE
NDMBGMFH_01312 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NDMBGMFH_01313 4.3e-239 yhjX EGP Major facilitator Superfamily
NDMBGMFH_01314 0.0 trxB1 1.8.1.9 C Thioredoxin domain
NDMBGMFH_01315 2.9e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
NDMBGMFH_01316 2e-118 cah 4.2.1.1 P Reversible hydration of carbon dioxide
NDMBGMFH_01317 1.9e-95 K helix_turn _helix lactose operon repressor
NDMBGMFH_01318 1.2e-241 ytfL P Transporter associated domain
NDMBGMFH_01319 3.4e-189 yddG EG EamA-like transporter family
NDMBGMFH_01320 1.9e-83 dps P Belongs to the Dps family
NDMBGMFH_01321 2.7e-137 S Protein of unknown function DUF45
NDMBGMFH_01322 5.2e-252 ulaA 2.7.1.194 S PTS system sugar-specific permease component
NDMBGMFH_01323 3.3e-40 ulaC 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
NDMBGMFH_01324 7.3e-77 ulaC 2.7.1.194, 2.7.1.197, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
NDMBGMFH_01325 2.3e-190 K helix_turn _helix lactose operon repressor
NDMBGMFH_01326 0.0 G Glycosyl hydrolase family 20, domain 2
NDMBGMFH_01329 0.0 3.2.1.55 GH51 G arabinose metabolic process
NDMBGMFH_01330 2.5e-50 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
NDMBGMFH_01331 2.5e-124 gntR K FCD
NDMBGMFH_01332 2.3e-259 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
NDMBGMFH_01334 1.4e-183 L Phage integrase family
NDMBGMFH_01336 2.7e-227
NDMBGMFH_01337 2.6e-185 pstIR 2.1.1.72, 3.1.21.4 L BsuBI/PstI restriction endonuclease C-terminus
NDMBGMFH_01338 4.1e-270 hsdBM 2.1.1.72 L Eco57I restriction-modification methylase
NDMBGMFH_01339 1e-114 L Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
NDMBGMFH_01340 9.6e-42 S Protein of unknown function (DUF2442)
NDMBGMFH_01341 1.4e-08 K helix_turn _helix lactose operon repressor
NDMBGMFH_01342 2.3e-228 I Serine aminopeptidase, S33
NDMBGMFH_01343 5.5e-188 K Periplasmic binding protein domain
NDMBGMFH_01344 2.7e-187 G Glycosyl hydrolases family 43
NDMBGMFH_01345 5.7e-21 abfA1 3.2.1.55 GH51 G arabinose metabolic process
NDMBGMFH_01346 4.6e-73 S Transmembrane domain of unknown function (DUF3566)
NDMBGMFH_01347 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NDMBGMFH_01348 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NDMBGMFH_01349 3.2e-93 S Protein of unknown function (DUF721)
NDMBGMFH_01350 4.7e-241 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NDMBGMFH_01351 6e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NDMBGMFH_01352 4.1e-300 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NDMBGMFH_01353 4.5e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
NDMBGMFH_01354 1e-171 yidC U Membrane protein insertase, YidC Oxa1 family
NDMBGMFH_01355 8.6e-93 jag S Putative single-stranded nucleic acids-binding domain
NDMBGMFH_01356 1.3e-125 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
NDMBGMFH_01357 8.5e-179 parA D CobQ CobB MinD ParA nucleotide binding domain protein
NDMBGMFH_01358 1.2e-242 parB K Belongs to the ParB family
NDMBGMFH_01359 7.6e-203 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NDMBGMFH_01360 0.0 murJ KLT MviN-like protein
NDMBGMFH_01361 0.0 M Conserved repeat domain
NDMBGMFH_01362 5.2e-124 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
NDMBGMFH_01363 2.8e-279 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
NDMBGMFH_01364 6.7e-113 S LytR cell envelope-related transcriptional attenuator
NDMBGMFH_01365 6e-167 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NDMBGMFH_01366 4.8e-171 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NDMBGMFH_01367 2.9e-210 S G5
NDMBGMFH_01369 8.4e-151 O Thioredoxin
NDMBGMFH_01370 0.0 KLT Protein tyrosine kinase
NDMBGMFH_01371 1.2e-174 K Psort location Cytoplasmic, score
NDMBGMFH_01372 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
NDMBGMFH_01373 5.2e-101 L Helix-turn-helix domain
NDMBGMFH_01374 0.0 S LPXTG-motif cell wall anchor domain protein
NDMBGMFH_01375 1.6e-240 M LPXTG-motif cell wall anchor domain protein
NDMBGMFH_01376 8.5e-179 3.4.22.70 M Sortase family
NDMBGMFH_01377 3.7e-154
NDMBGMFH_01378 1.4e-270 KLT Domain of unknown function (DUF4032)
NDMBGMFH_01379 9.9e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NDMBGMFH_01381 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
NDMBGMFH_01382 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
NDMBGMFH_01383 1.2e-111 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
NDMBGMFH_01384 0.0 yjcE P Sodium/hydrogen exchanger family
NDMBGMFH_01385 5.1e-144 ypfH S Phospholipase/Carboxylesterase
NDMBGMFH_01386 1.1e-83 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NDMBGMFH_01387 2.2e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
NDMBGMFH_01388 1.2e-143 cobB2 K Sir2 family
NDMBGMFH_01389 1.7e-168 G ABC transporter permease
NDMBGMFH_01390 1.1e-173 G Binding-protein-dependent transport system inner membrane component
NDMBGMFH_01391 1.5e-247 G Bacterial extracellular solute-binding protein
NDMBGMFH_01392 7.6e-310 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NDMBGMFH_01393 5.3e-74 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NDMBGMFH_01394 1.4e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
NDMBGMFH_01395 9.8e-230 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
NDMBGMFH_01396 1.8e-176 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
NDMBGMFH_01397 2.4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NDMBGMFH_01398 2.4e-133 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
NDMBGMFH_01399 1e-127 3.2.1.8 S alpha beta
NDMBGMFH_01400 4.8e-146 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NDMBGMFH_01401 1.4e-145 rpsB J Belongs to the universal ribosomal protein uS2 family
NDMBGMFH_01402 5.8e-88 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NDMBGMFH_01403 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
NDMBGMFH_01404 5.7e-91
NDMBGMFH_01405 2.5e-200 guaB 1.1.1.205 F IMP dehydrogenase family protein
NDMBGMFH_01406 3.3e-241 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
NDMBGMFH_01407 1.7e-277 G ABC transporter substrate-binding protein
NDMBGMFH_01408 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
NDMBGMFH_01409 6.5e-132 M Peptidase family M23
NDMBGMFH_01411 6.9e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NDMBGMFH_01412 3.1e-104 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
NDMBGMFH_01413 3.9e-159 yeaZ 2.3.1.234 O Glycoprotease family
NDMBGMFH_01414 3.8e-119 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
NDMBGMFH_01415 4.8e-182 holA 2.7.7.7 L DNA polymerase III delta subunit
NDMBGMFH_01416 0.0 comE S Competence protein
NDMBGMFH_01417 1.5e-88 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
NDMBGMFH_01418 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
NDMBGMFH_01419 2.6e-169 ET Bacterial periplasmic substrate-binding proteins
NDMBGMFH_01420 3.7e-171 corA P CorA-like Mg2+ transporter protein
NDMBGMFH_01421 4e-161 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
NDMBGMFH_01422 2e-299 E Serine carboxypeptidase
NDMBGMFH_01423 0.0 S Psort location Cytoplasmic, score 8.87
NDMBGMFH_01424 1.4e-107 S Domain of unknown function (DUF4194)
NDMBGMFH_01425 8.8e-284 S Psort location Cytoplasmic, score 8.87
NDMBGMFH_01426 1.4e-161 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
NDMBGMFH_01427 3.8e-63 yeaO K Protein of unknown function, DUF488
NDMBGMFH_01428 1.5e-120 ydaF_1 J Acetyltransferase (GNAT) domain
NDMBGMFH_01429 7.5e-91 MA20_25245 K FR47-like protein
NDMBGMFH_01430 9.5e-56 K Transcriptional regulator
NDMBGMFH_01431 4.5e-36 2.7.7.1, 3.6.1.13, 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
NDMBGMFH_01432 5.2e-31 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
NDMBGMFH_01434 6.6e-184 S Acetyltransferase (GNAT) domain
NDMBGMFH_01435 3.8e-78 qseC 2.7.13.3 T Histidine kinase
NDMBGMFH_01436 1.4e-132 S SOS response associated peptidase (SRAP)
NDMBGMFH_01437 1e-80
NDMBGMFH_01438 1.6e-79 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NDMBGMFH_01439 9.8e-164 rpoC M heme binding
NDMBGMFH_01440 3e-28 EGP Major facilitator Superfamily
NDMBGMFH_01441 6.4e-99 EGP Major facilitator Superfamily
NDMBGMFH_01443 1.5e-158
NDMBGMFH_01444 8.6e-96 ypjC S Putative ABC-transporter type IV
NDMBGMFH_01445 2.3e-110 ycaK 1.6.5.2 S NADPH-dependent FMN reductase
NDMBGMFH_01446 2.2e-193 V VanZ like family
NDMBGMFH_01447 1.8e-145 KT RESPONSE REGULATOR receiver
NDMBGMFH_01448 2.7e-70 pdxH S Pfam:Pyridox_oxidase
NDMBGMFH_01449 2.2e-141 yijF S Domain of unknown function (DUF1287)
NDMBGMFH_01450 8.5e-133 C Putative TM nitroreductase
NDMBGMFH_01451 1.5e-103
NDMBGMFH_01453 3.2e-255 nplT 3.2.1.1 GH13 G Alpha amylase, catalytic domain
NDMBGMFH_01454 1.3e-78 S Bacterial PH domain
NDMBGMFH_01455 4.2e-138 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
NDMBGMFH_01456 4.6e-68 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NDMBGMFH_01457 7.8e-263 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NDMBGMFH_01459 9.1e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NDMBGMFH_01460 1.6e-145 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NDMBGMFH_01461 3.7e-91
NDMBGMFH_01462 5.3e-237 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NDMBGMFH_01463 1.7e-284 thrC 4.2.3.1 E Threonine synthase N terminus
NDMBGMFH_01464 8.1e-123 S ABC-2 family transporter protein
NDMBGMFH_01465 2.8e-126 S ABC-2 family transporter protein
NDMBGMFH_01466 3.8e-176 V ATPases associated with a variety of cellular activities
NDMBGMFH_01467 3.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
NDMBGMFH_01468 5.8e-123 S Haloacid dehalogenase-like hydrolase
NDMBGMFH_01469 3.5e-292 recN L May be involved in recombinational repair of damaged DNA
NDMBGMFH_01470 7.3e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NDMBGMFH_01471 3.7e-231 trkB P Cation transport protein
NDMBGMFH_01472 6.8e-116 trkA P TrkA-N domain
NDMBGMFH_01473 3.6e-104
NDMBGMFH_01474 3.6e-137 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
NDMBGMFH_01476 1.1e-189 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
NDMBGMFH_01477 2.4e-156 L Tetratricopeptide repeat
NDMBGMFH_01479 1.7e-254 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NDMBGMFH_01480 1.6e-143 S Putative ABC-transporter type IV
NDMBGMFH_01481 7.2e-109 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
NDMBGMFH_01482 1.4e-281 argH 4.3.2.1 E argininosuccinate lyase
NDMBGMFH_01483 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
NDMBGMFH_01484 1.3e-206 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
NDMBGMFH_01485 4.8e-277 3.6.4.12 K Putative DNA-binding domain
NDMBGMFH_01486 3.4e-108 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
NDMBGMFH_01487 0.0 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
NDMBGMFH_01488 1e-156 S Domain of unknown function (DUF4357)
NDMBGMFH_01489 4.6e-99 3.1.21.3 V type I restriction modification DNA specificity domain
NDMBGMFH_01490 2e-178 L Phage integrase family
NDMBGMFH_01491 4.1e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
NDMBGMFH_01492 1.1e-84 argR K Regulates arginine biosynthesis genes
NDMBGMFH_01493 1.6e-182 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NDMBGMFH_01494 2.1e-246 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
NDMBGMFH_01495 1.7e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
NDMBGMFH_01496 1.3e-215 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NDMBGMFH_01497 1e-204 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NDMBGMFH_01498 1.4e-89
NDMBGMFH_01499 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
NDMBGMFH_01500 3.1e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NDMBGMFH_01501 5.4e-161 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NDMBGMFH_01502 7.6e-135 ybbL V ATPases associated with a variety of cellular activities
NDMBGMFH_01503 4.2e-136 ybbM V Uncharacterised protein family (UPF0014)
NDMBGMFH_01504 2.4e-50 IQ oxidoreductase activity
NDMBGMFH_01506 6.9e-83 K AraC-like ligand binding domain
NDMBGMFH_01507 1.4e-237 rutG F Permease family
NDMBGMFH_01508 3.1e-158 3.1.3.73 G Phosphoglycerate mutase family
NDMBGMFH_01509 5.1e-63 S Phospholipase/Carboxylesterase
NDMBGMFH_01510 3.1e-187 MA20_14895 S Conserved hypothetical protein 698
NDMBGMFH_01511 2.3e-145 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
NDMBGMFH_01512 1.4e-118 3.1.3.27 E haloacid dehalogenase-like hydrolase
NDMBGMFH_01513 1.9e-289 2.4.1.166 GT2 M Glycosyltransferase like family 2
NDMBGMFH_01515 0.0 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
NDMBGMFH_01516 2.1e-125 ypfH S Phospholipase/Carboxylesterase
NDMBGMFH_01517 3.5e-73 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
NDMBGMFH_01518 3e-14
NDMBGMFH_01519 1.2e-34 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
NDMBGMFH_01520 2.8e-66 S Zincin-like metallopeptidase
NDMBGMFH_01521 2.7e-87 S Helix-turn-helix
NDMBGMFH_01522 9.3e-199 S Short C-terminal domain
NDMBGMFH_01523 2.7e-22
NDMBGMFH_01524 1.5e-148
NDMBGMFH_01525 4.5e-79 K Psort location Cytoplasmic, score
NDMBGMFH_01526 1.1e-258 KLT Protein tyrosine kinase
NDMBGMFH_01527 7.9e-66 S Cupin 2, conserved barrel domain protein
NDMBGMFH_01528 2.3e-156 ksgA 2.1.1.182 J Methyltransferase domain
NDMBGMFH_01529 5.6e-59 yccF S Inner membrane component domain
NDMBGMFH_01530 1.7e-120 E Psort location Cytoplasmic, score 8.87
NDMBGMFH_01532 4.4e-109
NDMBGMFH_01533 4e-192 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
NDMBGMFH_01534 9.2e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
NDMBGMFH_01535 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
NDMBGMFH_01536 2.3e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NDMBGMFH_01537 7.1e-94 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NDMBGMFH_01538 1.5e-269 yhdG E aromatic amino acid transport protein AroP K03293
NDMBGMFH_01539 2e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NDMBGMFH_01540 1.1e-247 dgt 3.1.5.1 F Phosphohydrolase-associated domain
NDMBGMFH_01541 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NDMBGMFH_01542 3.9e-159 K Helix-turn-helix domain, rpiR family
NDMBGMFH_01543 2e-230 K Putative ATP-dependent DNA helicase recG C-terminal
NDMBGMFH_01544 1.4e-44 S Memo-like protein
NDMBGMFH_01546 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NDMBGMFH_01547 8.5e-179 adh3 C Zinc-binding dehydrogenase
NDMBGMFH_01548 4.7e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NDMBGMFH_01549 2.4e-228 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NDMBGMFH_01550 5.1e-74 zur P Belongs to the Fur family
NDMBGMFH_01551 1.5e-45
NDMBGMFH_01552 2.6e-154 S TIGRFAM TIGR03943 family protein
NDMBGMFH_01553 1.6e-202 ycgR S Predicted permease
NDMBGMFH_01554 2.3e-23 J Ribosomal L32p protein family
NDMBGMFH_01555 8.2e-15 rpmJ J Ribosomal protein L36
NDMBGMFH_01556 2e-42 rpmE2 J Ribosomal protein L31
NDMBGMFH_01557 7.5e-49 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NDMBGMFH_01558 2.6e-46 rpmB J Ribosomal L28 family
NDMBGMFH_01559 2.3e-139 S cobalamin synthesis protein
NDMBGMFH_01560 1.5e-161 P Zinc-uptake complex component A periplasmic
NDMBGMFH_01562 0.0 lysX S Uncharacterised conserved protein (DUF2156)
NDMBGMFH_01563 2.7e-247 S Putative esterase
NDMBGMFH_01564 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
NDMBGMFH_01565 7.2e-239 purD 6.3.4.13 F Belongs to the GARS family
NDMBGMFH_01566 8.9e-187 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
NDMBGMFH_01567 1.3e-292 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NDMBGMFH_01568 1.8e-303 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
NDMBGMFH_01569 2e-32
NDMBGMFH_01570 1.8e-68 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NDMBGMFH_01571 1.7e-31 K DNA-binding transcription factor activity
NDMBGMFH_01572 4.5e-149 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
NDMBGMFH_01573 8.5e-51 S Protein of unknown function (DUF4230)
NDMBGMFH_01574 7.2e-108
NDMBGMFH_01575 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
NDMBGMFH_01576 3.8e-139 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
NDMBGMFH_01577 2.2e-235 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NDMBGMFH_01578 0.0 M Parallel beta-helix repeats
NDMBGMFH_01579 4.5e-227 M Glycosyl transferase 4-like domain
NDMBGMFH_01580 5.9e-199 ltaE 4.1.2.48 E Beta-eliminating lyase
NDMBGMFH_01582 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NDMBGMFH_01583 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NDMBGMFH_01584 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NDMBGMFH_01585 8.1e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NDMBGMFH_01586 3.3e-87 xynX5 3.1.4.46, 3.2.1.8 I PAP2 superfamily
NDMBGMFH_01587 5.3e-209 S Esterase-like activity of phytase
NDMBGMFH_01588 2.8e-189 EGP Transmembrane secretion effector
NDMBGMFH_01590 3.3e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NDMBGMFH_01591 1.3e-93 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NDMBGMFH_01592 1e-237 carA 6.3.5.5 F Belongs to the CarA family
NDMBGMFH_01593 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
NDMBGMFH_01594 2e-302 gmk 2.4.2.10, 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
NDMBGMFH_01595 0.0 S Protein of unknown function DUF262
NDMBGMFH_01596 9.1e-116 K helix_turn_helix, Lux Regulon
NDMBGMFH_01597 2.9e-268 T Histidine kinase
NDMBGMFH_01598 1e-97 S Domain of unknown function (DUF5067)
NDMBGMFH_01599 6.6e-132 ybhL S Belongs to the BI1 family
NDMBGMFH_01600 7.5e-172 ydeD EG EamA-like transporter family
NDMBGMFH_01601 3.2e-121 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
NDMBGMFH_01602 5.7e-280 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NDMBGMFH_01603 3.1e-185 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NDMBGMFH_01604 1.2e-137 fic D Fic/DOC family
NDMBGMFH_01605 0.0 ftsK D FtsK SpoIIIE family protein
NDMBGMFH_01606 9.2e-124 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NDMBGMFH_01607 1.3e-96 cinA 3.5.1.42 S Belongs to the CinA family
NDMBGMFH_01608 1.6e-80 K Helix-turn-helix XRE-family like proteins
NDMBGMFH_01609 3.7e-40 S Protein of unknown function (DUF3046)
NDMBGMFH_01610 1e-215 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NDMBGMFH_01611 7.1e-74 recX S Modulates RecA activity
NDMBGMFH_01612 1e-07
NDMBGMFH_01614 6.7e-111 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NDMBGMFH_01615 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NDMBGMFH_01616 3e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NDMBGMFH_01617 4.3e-109
NDMBGMFH_01618 4.6e-134 plsC2 2.3.1.51 I Phosphate acyltransferases
NDMBGMFH_01619 0.0 pknL 2.7.11.1 KLT PASTA
NDMBGMFH_01620 3e-201 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
NDMBGMFH_01621 2.9e-122
NDMBGMFH_01622 1.3e-181 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NDMBGMFH_01623 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
NDMBGMFH_01624 5.2e-278 aspA 4.3.1.1 E Fumarase C C-terminus
NDMBGMFH_01625 3.2e-45 S Protein of unknown function (DUF2975)
NDMBGMFH_01626 3e-25 yozG K Cro/C1-type HTH DNA-binding domain
NDMBGMFH_01627 0.0 lhr L DEAD DEAH box helicase
NDMBGMFH_01628 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
NDMBGMFH_01629 6.5e-237 S Type I phosphodiesterase / nucleotide pyrophosphatase
NDMBGMFH_01630 1.7e-172 S Protein of unknown function (DUF3071)
NDMBGMFH_01631 1.4e-47 S Domain of unknown function (DUF4193)
NDMBGMFH_01632 1.1e-83 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
NDMBGMFH_01633 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NDMBGMFH_01634 1.7e-13
NDMBGMFH_01635 1.9e-208 E Belongs to the peptidase S1B family
NDMBGMFH_01636 1.8e-68 T Toxic component of a toxin-antitoxin (TA) module
NDMBGMFH_01637 1.1e-49 relB L RelB antitoxin
NDMBGMFH_01638 2.3e-07
NDMBGMFH_01639 3.6e-210 L Transposase and inactivated derivatives IS30 family
NDMBGMFH_01640 5.8e-247 L Phage integrase family
NDMBGMFH_01641 1.3e-142 fic D Fic/DOC family
NDMBGMFH_01642 1.1e-26
NDMBGMFH_01643 8.8e-259 S Domain of unknown function (DUF4143)
NDMBGMFH_01644 3.4e-17 yccF S Inner membrane component domain
NDMBGMFH_01645 3.5e-12
NDMBGMFH_01646 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
NDMBGMFH_01647 3.9e-43 tnp7109-21 L Integrase core domain
NDMBGMFH_01648 2.5e-52 L IstB-like ATP binding protein
NDMBGMFH_01649 8.7e-46 L Transposase
NDMBGMFH_01650 2e-73 I Sterol carrier protein
NDMBGMFH_01651 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
NDMBGMFH_01652 3.4e-35
NDMBGMFH_01653 1.9e-144 gluP 3.4.21.105 S Rhomboid family
NDMBGMFH_01654 1.3e-120 L HTH-like domain
NDMBGMFH_01655 1.6e-257 L ribosomal rna small subunit methyltransferase
NDMBGMFH_01656 2.6e-71 crgA D Involved in cell division
NDMBGMFH_01657 7.9e-143 S Bacterial protein of unknown function (DUF881)
NDMBGMFH_01658 2.6e-233 srtA 3.4.22.70 M Sortase family
NDMBGMFH_01659 3.4e-120 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
NDMBGMFH_01660 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
NDMBGMFH_01661 2e-183 T Protein tyrosine kinase
NDMBGMFH_01662 1.3e-263 pbpA M penicillin-binding protein
NDMBGMFH_01663 2.8e-266 rodA D Belongs to the SEDS family
NDMBGMFH_01664 4.8e-259 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
NDMBGMFH_01665 7.9e-94 fhaB T Inner membrane component of T3SS, cytoplasmic domain
NDMBGMFH_01666 1e-130 fhaA T Protein of unknown function (DUF2662)
NDMBGMFH_01667 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
NDMBGMFH_01668 0.0 pip S YhgE Pip domain protein
NDMBGMFH_01669 4.8e-297 pip S YhgE Pip domain protein
NDMBGMFH_01670 3.9e-206 pldB 3.1.1.5 I Serine aminopeptidase, S33
NDMBGMFH_01671 2.5e-162 yicL EG EamA-like transporter family
NDMBGMFH_01672 6.9e-104
NDMBGMFH_01674 6e-196 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NDMBGMFH_01676 0.0 KL Domain of unknown function (DUF3427)
NDMBGMFH_01677 1.7e-90 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
NDMBGMFH_01678 5.2e-39 D DivIVA domain protein
NDMBGMFH_01679 9.3e-53 ybjQ S Putative heavy-metal-binding
NDMBGMFH_01680 4.3e-149 I Serine aminopeptidase, S33
NDMBGMFH_01681 5.9e-85 yjcF Q Acetyltransferase (GNAT) domain
NDMBGMFH_01683 4.9e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NDMBGMFH_01684 3.8e-244 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
NDMBGMFH_01685 0.0 cadA P E1-E2 ATPase
NDMBGMFH_01686 5e-273 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
NDMBGMFH_01687 5.8e-169 htpX O Belongs to the peptidase M48B family
NDMBGMFH_01689 0.0 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
NDMBGMFH_01690 1.9e-42 S Bacterial mobilisation protein (MobC)
NDMBGMFH_01691 2.3e-127 S Domain of unknown function (DUF4417)
NDMBGMFH_01693 1.9e-61
NDMBGMFH_01694 6.8e-65
NDMBGMFH_01695 3.9e-50 E IrrE N-terminal-like domain
NDMBGMFH_01696 2e-12 E IrrE N-terminal-like domain
NDMBGMFH_01697 4.9e-57 K Cro/C1-type HTH DNA-binding domain
NDMBGMFH_01698 1e-248 3.5.1.104 G Polysaccharide deacetylase
NDMBGMFH_01699 3.3e-200 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
NDMBGMFH_01700 1.9e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NDMBGMFH_01701 1.5e-164 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NDMBGMFH_01702 1.1e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NDMBGMFH_01703 7.3e-197 K helix_turn _helix lactose operon repressor
NDMBGMFH_01704 8.5e-75 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
NDMBGMFH_01705 1.1e-298 scrT G Transporter major facilitator family protein
NDMBGMFH_01706 5e-254 yhjE EGP Sugar (and other) transporter
NDMBGMFH_01707 6.2e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NDMBGMFH_01708 2.6e-126 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NDMBGMFH_01709 2.6e-183 gmk 1.1.1.23, 2.7.4.8 S Protein of unknown function (DUF559)
NDMBGMFH_01710 0.0 lacZ 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NDMBGMFH_01711 5.1e-276 aroP E aromatic amino acid transport protein AroP K03293
NDMBGMFH_01712 7e-101 K Transcriptional regulator C-terminal region
NDMBGMFH_01713 2.6e-129 V ABC transporter
NDMBGMFH_01714 0.0 V FtsX-like permease family
NDMBGMFH_01715 8.6e-84 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NDMBGMFH_01716 3e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NDMBGMFH_01717 1.1e-37 E ABC transporter
NDMBGMFH_01718 7.6e-100 bcp 1.11.1.15 O Redoxin
NDMBGMFH_01719 2.1e-150 S Virulence factor BrkB
NDMBGMFH_01720 4.2e-42 XAC3035 O Glutaredoxin
NDMBGMFH_01721 1.2e-105 L Transposase
NDMBGMFH_01722 0.0 yvnB 3.1.4.53 S Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
NDMBGMFH_01723 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NDMBGMFH_01724 5.5e-55 L HNH endonuclease
NDMBGMFH_01725 2.9e-243 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
NDMBGMFH_01726 4.9e-117
NDMBGMFH_01727 5e-266 EGP Major Facilitator Superfamily
NDMBGMFH_01728 3.5e-41 2.3.1.39 IQ [acyl-carrier-protein] S-malonyltransferase activity
NDMBGMFH_01729 3.1e-65 L Integrase core domain
NDMBGMFH_01730 2.4e-116 parA D AAA domain
NDMBGMFH_01731 4.4e-91 S Transcription factor WhiB
NDMBGMFH_01732 1.1e-42
NDMBGMFH_01733 1.6e-181 S Helix-turn-helix domain
NDMBGMFH_01734 1.1e-29
NDMBGMFH_01735 2.3e-114
NDMBGMFH_01736 6.2e-131
NDMBGMFH_01737 6.3e-50
NDMBGMFH_01738 1.1e-176 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NDMBGMFH_01739 5.5e-166 S Sucrose-6F-phosphate phosphohydrolase
NDMBGMFH_01740 2.1e-94 P ABC-type metal ion transport system permease component
NDMBGMFH_01741 2.7e-224 S Peptidase dimerisation domain
NDMBGMFH_01742 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NDMBGMFH_01743 4.9e-40
NDMBGMFH_01744 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
NDMBGMFH_01745 3.9e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NDMBGMFH_01746 1.3e-113 S Protein of unknown function (DUF3000)
NDMBGMFH_01747 2.4e-250 rnd 3.1.13.5 J 3'-5' exonuclease
NDMBGMFH_01748 2.8e-236 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
NDMBGMFH_01749 1e-254 clcA_2 P Voltage gated chloride channel
NDMBGMFH_01750 1.1e-112 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NDMBGMFH_01751 1.5e-127 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NDMBGMFH_01752 1.3e-243 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NDMBGMFH_01755 1e-234 patB 4.4.1.8 E Aminotransferase, class I II
NDMBGMFH_01756 1.2e-225 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NDMBGMFH_01757 8.4e-168 fmt2 3.2.2.10 S Belongs to the LOG family
NDMBGMFH_01758 1.1e-118 safC S O-methyltransferase
NDMBGMFH_01759 4.6e-185 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
NDMBGMFH_01760 3e-71 yraN L Belongs to the UPF0102 family
NDMBGMFH_01761 7.2e-294 comM O Magnesium chelatase, subunit ChlI C-terminal
NDMBGMFH_01762 5.1e-284 dprA 5.99.1.2 LU DNA recombination-mediator protein A
NDMBGMFH_01763 1.4e-57 ybaZ 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
NDMBGMFH_01764 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
NDMBGMFH_01765 1.5e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
NDMBGMFH_01766 4.6e-157 S Putative ABC-transporter type IV
NDMBGMFH_01767 2.6e-252 metY 2.5.1.49 E Aminotransferase class-V
NDMBGMFH_01768 4e-162 V ABC transporter, ATP-binding protein
NDMBGMFH_01769 0.0 MV MacB-like periplasmic core domain
NDMBGMFH_01770 0.0 phoN I PAP2 superfamily
NDMBGMFH_01771 6.1e-132 K helix_turn_helix, Lux Regulon
NDMBGMFH_01772 0.0 tcsS2 T Histidine kinase
NDMBGMFH_01773 1.9e-264 pip 3.4.11.5 S alpha/beta hydrolase fold
NDMBGMFH_01774 6.1e-143 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NDMBGMFH_01775 1.9e-167 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
NDMBGMFH_01776 3.2e-147 P NLPA lipoprotein
NDMBGMFH_01777 5.9e-188 acoA 1.2.4.1 C Dehydrogenase E1 component
NDMBGMFH_01778 3.2e-184 1.2.4.1 C Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit
NDMBGMFH_01779 1.6e-205 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NDMBGMFH_01780 2.9e-93 metI P Binding-protein-dependent transport system inner membrane component
NDMBGMFH_01781 5.4e-228 mtnE 2.6.1.83 E Aminotransferase class I and II
NDMBGMFH_01782 1.2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NDMBGMFH_01783 3.1e-194 int L Phage integrase, N-terminal SAM-like domain
NDMBGMFH_01784 1.7e-27 S Protein of unknown function (DUF3800)
NDMBGMFH_01785 9.7e-30
NDMBGMFH_01786 6.8e-08 int L Phage integrase, N-terminal SAM-like domain
NDMBGMFH_01787 2.6e-119 dprA LU DNA recombination-mediator protein A
NDMBGMFH_01788 4.1e-60 S competence protein
NDMBGMFH_01789 3.4e-09
NDMBGMFH_01792 4.6e-16
NDMBGMFH_01793 7.5e-66 L Integrase core domain
NDMBGMFH_01794 5e-116 K WHG domain
NDMBGMFH_01795 1.4e-90 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
NDMBGMFH_01797 7.9e-17 M Belongs to the glycosyl hydrolase 30 family
NDMBGMFH_01798 8.1e-98 M Belongs to the glycosyl hydrolase 30 family
NDMBGMFH_01799 4.8e-190 1.1.1.65 C Aldo/keto reductase family
NDMBGMFH_01800 5.9e-94 ydgJ K helix_turn_helix multiple antibiotic resistance protein
NDMBGMFH_01801 0.0 lmrA1 V ABC transporter, ATP-binding protein
NDMBGMFH_01802 0.0 lmrA2 V ABC transporter transmembrane region
NDMBGMFH_01804 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
NDMBGMFH_01805 1.3e-107 S Phosphatidylethanolamine-binding protein
NDMBGMFH_01806 0.0 pepD E Peptidase family C69
NDMBGMFH_01807 1.8e-287 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
NDMBGMFH_01808 1.3e-62 S Macrophage migration inhibitory factor (MIF)
NDMBGMFH_01809 6.8e-98 S GtrA-like protein
NDMBGMFH_01810 6.2e-263 EGP Major facilitator Superfamily
NDMBGMFH_01811 1.2e-125 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
NDMBGMFH_01812 5.1e-141
NDMBGMFH_01813 5.8e-138 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
NDMBGMFH_01814 3.3e-200 P NMT1/THI5 like
NDMBGMFH_01815 3.1e-124 S HAD hydrolase, family IA, variant 3
NDMBGMFH_01817 6.3e-298 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NDMBGMFH_01818 3.1e-95 S Domain of unknown function (DUF4143)
NDMBGMFH_01819 1.8e-63 S Domain of unknown function (DUF4143)
NDMBGMFH_01822 1.7e-251 S Calcineurin-like phosphoesterase
NDMBGMFH_01823 2.8e-138 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
NDMBGMFH_01824 2.2e-273 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NDMBGMFH_01825 3.8e-133 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NDMBGMFH_01826 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
NDMBGMFH_01828 7.1e-182 S CAAX protease self-immunity
NDMBGMFH_01829 3.6e-221 pyrD 1.3.1.14 F Dihydroorotate dehydrogenase
NDMBGMFH_01830 9.8e-255 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NDMBGMFH_01831 5.3e-224 G Transmembrane secretion effector
NDMBGMFH_01832 2.1e-131 K Bacterial regulatory proteins, tetR family
NDMBGMFH_01833 1.3e-125
NDMBGMFH_01834 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NDMBGMFH_01835 6.1e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NDMBGMFH_01836 6.3e-166 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
NDMBGMFH_01837 2.3e-185
NDMBGMFH_01838 7.9e-180
NDMBGMFH_01839 1.1e-162 trxA2 O Tetratricopeptide repeat
NDMBGMFH_01840 2.8e-119 cyaA 4.6.1.1 S CYTH
NDMBGMFH_01842 1.4e-184 K Bacterial regulatory proteins, lacI family
NDMBGMFH_01843 1.5e-62 4.2.1.68 M Enolase C-terminal domain-like
NDMBGMFH_01844 6.8e-150 IQ KR domain
NDMBGMFH_01846 2.3e-53 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)