ORF_ID e_value Gene_name EC_number CAZy COGs Description
ALLCAPLI_00001 3.9e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
ALLCAPLI_00002 6.8e-204 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ALLCAPLI_00003 6.5e-224 cinA 3.5.1.42 S Belongs to the CinA family
ALLCAPLI_00004 2.5e-103 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
ALLCAPLI_00005 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
ALLCAPLI_00007 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ALLCAPLI_00009 1.6e-68 K LytTr DNA-binding domain
ALLCAPLI_00010 1.5e-77 S Protein of unknown function (DUF3021)
ALLCAPLI_00011 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ALLCAPLI_00012 1.8e-54 ymcA 3.6.3.21 S Belongs to the UPF0342 family
ALLCAPLI_00013 3.4e-68 argR K Regulates arginine biosynthesis genes
ALLCAPLI_00014 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
ALLCAPLI_00017 2.1e-12
ALLCAPLI_00018 4.8e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ALLCAPLI_00019 4.8e-24
ALLCAPLI_00020 4.3e-33
ALLCAPLI_00021 2.3e-173 1.1.1.169 H Ketopantoate reductase
ALLCAPLI_00022 2.4e-198 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ALLCAPLI_00023 3.5e-80 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ALLCAPLI_00024 3.9e-237 purD 6.3.4.13 F Belongs to the GARS family
ALLCAPLI_00025 3.9e-156 S CHAP domain
ALLCAPLI_00026 1.7e-41 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
ALLCAPLI_00027 1.1e-201 L Psort location Cytoplasmic, score
ALLCAPLI_00028 5.6e-45
ALLCAPLI_00029 1.2e-293 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
ALLCAPLI_00030 5.2e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ALLCAPLI_00031 5.5e-189 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
ALLCAPLI_00032 5.1e-273 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ALLCAPLI_00033 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ALLCAPLI_00034 3.4e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
ALLCAPLI_00035 6.9e-29 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
ALLCAPLI_00036 5e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
ALLCAPLI_00037 7.5e-138 recO L Involved in DNA repair and RecF pathway recombination
ALLCAPLI_00038 1.8e-215 araT 2.6.1.1 E Aminotransferase
ALLCAPLI_00039 9.5e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ALLCAPLI_00040 1.4e-84 usp 3.5.1.28 CBM50 S CHAP domain
ALLCAPLI_00041 1e-82 mreD M rod shape-determining protein MreD
ALLCAPLI_00042 1.2e-117 mreC M Involved in formation and maintenance of cell shape
ALLCAPLI_00048 2.6e-10
ALLCAPLI_00056 2.6e-144 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
ALLCAPLI_00057 1.6e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
ALLCAPLI_00058 6.4e-128 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
ALLCAPLI_00059 1.6e-233 vicK 2.7.13.3 T Histidine kinase
ALLCAPLI_00060 2.7e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
ALLCAPLI_00061 1.5e-56 S Protein of unknown function (DUF454)
ALLCAPLI_00062 1.8e-226 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
ALLCAPLI_00063 4.6e-146 yidA S hydrolases of the HAD superfamily
ALLCAPLI_00064 3.5e-144 XK27_00115 2.3.1.128 K Acetyltransferase GNAT family
ALLCAPLI_00065 1.2e-67 ywiB S Domain of unknown function (DUF1934)
ALLCAPLI_00066 0.0 pacL 3.6.3.8 P cation transport ATPase
ALLCAPLI_00067 1.2e-129 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
ALLCAPLI_00068 1.1e-153 yjjH S Calcineurin-like phosphoesterase
ALLCAPLI_00069 3e-204 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ALLCAPLI_00070 5.7e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ALLCAPLI_00071 5.5e-124 ftsE D cell division ATP-binding protein FtsE
ALLCAPLI_00072 7.3e-164 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
ALLCAPLI_00073 8.1e-90 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
ALLCAPLI_00074 4e-175 yubA S permease
ALLCAPLI_00075 1.9e-220 G COG0457 FOG TPR repeat
ALLCAPLI_00076 3.3e-95 lepB 3.4.21.89 U Belongs to the peptidase S26 family
ALLCAPLI_00077 0.0 lytC 3.4.17.14, 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
ALLCAPLI_00078 5.9e-230 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
ALLCAPLI_00079 9.6e-86 ebsA S Family of unknown function (DUF5322)
ALLCAPLI_00080 5.5e-17 M LysM domain
ALLCAPLI_00081 5.6e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
ALLCAPLI_00082 1e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ALLCAPLI_00083 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
ALLCAPLI_00084 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ALLCAPLI_00085 1.6e-74 XK27_03610 K Gnat family
ALLCAPLI_00086 1.5e-89 yybC
ALLCAPLI_00087 4.9e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
ALLCAPLI_00088 3.6e-271 pepV 3.5.1.18 E Dipeptidase
ALLCAPLI_00089 1.5e-106 ung2 3.2.2.27 L Uracil-DNA glycosylase
ALLCAPLI_00090 2.7e-225 V Glucan-binding protein C
ALLCAPLI_00091 7.2e-253 V Glucan-binding protein C
ALLCAPLI_00092 3.2e-153 endA F DNA RNA non-specific endonuclease
ALLCAPLI_00093 5.5e-26 epuA S DNA-directed RNA polymerase subunit beta
ALLCAPLI_00094 2.2e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ALLCAPLI_00095 1e-193 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
ALLCAPLI_00096 7.4e-247 ydaM M Glycosyltransferases, probably involved in cell wall biogenesis
ALLCAPLI_00098 3.6e-132
ALLCAPLI_00099 2.5e-214 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
ALLCAPLI_00100 9.5e-209 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ALLCAPLI_00101 9.6e-172 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
ALLCAPLI_00102 9.2e-303 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ALLCAPLI_00103 6.3e-85 ytsP 1.8.4.14 T GAF domain-containing protein
ALLCAPLI_00104 4.8e-160 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ALLCAPLI_00105 3.2e-20 WQ51_02665 S Protein of unknown function (DUF3042)
ALLCAPLI_00108 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
ALLCAPLI_00109 8.3e-208 XK27_05110 P Chloride transporter ClC family
ALLCAPLI_00110 1.2e-37 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
ALLCAPLI_00111 5.6e-278 clcA P Chloride transporter, ClC family
ALLCAPLI_00112 1.8e-75 fld C Flavodoxin
ALLCAPLI_00113 2.2e-18 XK27_08880
ALLCAPLI_00114 4.7e-126 XK27_08875 O Zinc-dependent metalloprotease
ALLCAPLI_00115 3.6e-148 estA CE1 S Esterase
ALLCAPLI_00116 3e-309 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ALLCAPLI_00117 3.1e-136 XK27_08845 S abc transporter atp-binding protein
ALLCAPLI_00118 5.8e-147 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
ALLCAPLI_00119 4.7e-177 XK27_08835 S ABC transporter substrate binding protein
ALLCAPLI_00120 1.7e-18 S Domain of unknown function (DUF4649)
ALLCAPLI_00121 0.0 Q the current gene model (or a revised gene model) may contain a frame shift
ALLCAPLI_00122 3.6e-250 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
ALLCAPLI_00123 8.9e-133 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
ALLCAPLI_00124 2.2e-109 cps4C M biosynthesis protein
ALLCAPLI_00125 5.2e-112 cpsD D COG0489 ATPases involved in chromosome partitioning
ALLCAPLI_00126 2.2e-249 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
ALLCAPLI_00127 7.7e-219 rgpAc GT4 M group 1 family protein
ALLCAPLI_00128 2e-208 wcoF M Glycosyltransferase, group 1 family protein
ALLCAPLI_00129 7.9e-43 Z012_10770 M Domain of unknown function (DUF1919)
ALLCAPLI_00130 2.7e-38 Z012_10770 M Domain of unknown function (DUF1919)
ALLCAPLI_00131 3.1e-165 M Glycosyltransferase, group 2 family protein
ALLCAPLI_00132 3.1e-128 sacB GT2,GT4 M Stealth protein CR2, conserved region 2
ALLCAPLI_00133 2.8e-178 M Glycosyltransferase
ALLCAPLI_00134 1.5e-172 S glycosyl transferase family 2
ALLCAPLI_00135 9.9e-217
ALLCAPLI_00136 4.2e-227 S Polysaccharide biosynthesis protein
ALLCAPLI_00137 8.3e-207 M transferase activity, transferring glycosyl groups
ALLCAPLI_00138 2.7e-277 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
ALLCAPLI_00139 3.6e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
ALLCAPLI_00140 0.0 dnaE 2.7.7.7 L DNA polymerase
ALLCAPLI_00141 4.7e-120 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ALLCAPLI_00142 1e-231 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
ALLCAPLI_00143 2.6e-84 S Protein of unknown function (DUF1697)
ALLCAPLI_00144 1.7e-148 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
ALLCAPLI_00145 1.1e-50 S LemA family
ALLCAPLI_00146 2.4e-162 clcA_2 P chloride
ALLCAPLI_00147 1.5e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
ALLCAPLI_00148 4.9e-128 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
ALLCAPLI_00150 4.2e-65 glnQ 3.6.3.21 E abc transporter atp-binding protein
ALLCAPLI_00151 4.9e-143 peb1A ET Belongs to the bacterial solute-binding protein 3 family
ALLCAPLI_00152 2.4e-30 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
ALLCAPLI_00153 6.3e-89 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
ALLCAPLI_00154 9.1e-107 pgm G Belongs to the phosphoglycerate mutase family
ALLCAPLI_00155 8.3e-108 G Belongs to the phosphoglycerate mutase family
ALLCAPLI_00156 7.8e-103 G Belongs to the phosphoglycerate mutase family
ALLCAPLI_00157 6.8e-196 S hmm pf01594
ALLCAPLI_00158 3.5e-282 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
ALLCAPLI_00159 4.1e-38 S granule-associated protein
ALLCAPLI_00160 2e-278 S unusual protein kinase
ALLCAPLI_00161 5e-100 estA E Lysophospholipase L1 and related esterases
ALLCAPLI_00162 2e-152 rssA S Phospholipase, patatin family
ALLCAPLI_00163 5.8e-247 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
ALLCAPLI_00164 9.2e-212 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
ALLCAPLI_00165 5.9e-120 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ALLCAPLI_00166 3.5e-233 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
ALLCAPLI_00167 2.3e-300 S the current gene model (or a revised gene model) may contain a frame shift
ALLCAPLI_00168 9.3e-226 2.7.13.3 T protein histidine kinase activity
ALLCAPLI_00169 2.1e-198 hpk9 2.7.13.3 T protein histidine kinase activity
ALLCAPLI_00170 1.5e-183 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
ALLCAPLI_00171 6.4e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
ALLCAPLI_00172 3.8e-184 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
ALLCAPLI_00173 4.8e-311 lpdA 1.8.1.4 C Dehydrogenase
ALLCAPLI_00174 0.0 3.5.1.28 NU amidase activity
ALLCAPLI_00175 0.0 3.5.1.28 M N-Acetylmuramoyl-L-alanine amidase
ALLCAPLI_00176 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
ALLCAPLI_00177 5.1e-143 ycdO P periplasmic lipoprotein involved in iron transport
ALLCAPLI_00178 9.9e-230 ycdB P peroxidase
ALLCAPLI_00179 3.3e-292 ywbL P COG0672 High-affinity Fe2 Pb2 permease
ALLCAPLI_00180 3.8e-120 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ALLCAPLI_00181 3e-24 tatA U protein secretion
ALLCAPLI_00182 3e-212 msmX P Belongs to the ABC transporter superfamily
ALLCAPLI_00183 9.8e-152 malG P ABC transporter (Permease
ALLCAPLI_00184 5.7e-250 malF P ABC transporter (Permease
ALLCAPLI_00185 3.9e-229 malX G ABC transporter
ALLCAPLI_00186 4.5e-172 malR K Transcriptional regulator
ALLCAPLI_00187 2.8e-298 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
ALLCAPLI_00188 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
ALLCAPLI_00189 1.2e-27
ALLCAPLI_00190 2.3e-184 lplA 6.3.1.20 H Lipoate-protein ligase
ALLCAPLI_00191 2.5e-192 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
ALLCAPLI_00192 0.0 pepN 3.4.11.2 E aminopeptidase
ALLCAPLI_00193 3.2e-113 phoU P Plays a role in the regulation of phosphate uptake
ALLCAPLI_00194 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
ALLCAPLI_00195 1.5e-149 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
ALLCAPLI_00196 9.1e-156 pstA P phosphate transport system permease
ALLCAPLI_00197 1.4e-156 pstC P probably responsible for the translocation of the substrate across the membrane
ALLCAPLI_00198 2.6e-155 pstS P phosphate
ALLCAPLI_00199 3.1e-245 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
ALLCAPLI_00200 7.2e-141 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
ALLCAPLI_00201 4.3e-43 yktA S Belongs to the UPF0223 family
ALLCAPLI_00202 4e-44 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
ALLCAPLI_00203 3.3e-169 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
ALLCAPLI_00204 1.5e-147 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ALLCAPLI_00205 1.9e-237 XK27_04775 S hemerythrin HHE cation binding domain
ALLCAPLI_00206 8e-35 M1-755 P Hemerythrin HHE cation binding domain protein
ALLCAPLI_00207 4.8e-111 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
ALLCAPLI_00208 1.6e-85 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ALLCAPLI_00209 1.6e-137 S haloacid dehalogenase-like hydrolase
ALLCAPLI_00210 2.5e-239 metY 2.5.1.49 E o-acetylhomoserine
ALLCAPLI_00211 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
ALLCAPLI_00212 1.2e-239 agcS E (Alanine) symporter
ALLCAPLI_00213 4.4e-242 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ALLCAPLI_00214 8.4e-171 bglC K Transcriptional regulator
ALLCAPLI_00215 0.0 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
ALLCAPLI_00216 9.3e-81 yecS P ABC transporter (Permease
ALLCAPLI_00217 3.9e-148 yckB ET Belongs to the bacterial solute-binding protein 3 family
ALLCAPLI_00218 1.8e-241 nylA 3.5.1.4 J Belongs to the amidase family
ALLCAPLI_00219 9.8e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ALLCAPLI_00220 2.5e-124 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
ALLCAPLI_00221 5.5e-175 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
ALLCAPLI_00222 2.2e-145 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
ALLCAPLI_00223 3.7e-91 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
ALLCAPLI_00224 1.1e-131 S TraX protein
ALLCAPLI_00225 1.5e-308 FbpA K RNA-binding protein homologous to eukaryotic snRNP
ALLCAPLI_00226 1.3e-274 S Psort location CytoplasmicMembrane, score
ALLCAPLI_00227 1.1e-234 dinF V Mate efflux family protein
ALLCAPLI_00228 2.3e-176 yclQ P ABC-type enterochelin transport system, periplasmic component
ALLCAPLI_00229 0.0 V Type III restriction enzyme, res subunit
ALLCAPLI_00230 6e-109 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
ALLCAPLI_00231 3.5e-140 2.4.2.3 F Phosphorylase superfamily
ALLCAPLI_00232 1.5e-109 K Bacterial regulatory proteins, tetR family
ALLCAPLI_00233 1.8e-177 ybhR V ABC transporter
ALLCAPLI_00234 1e-125 ybhF_2 V abc transporter atp-binding protein
ALLCAPLI_00237 4.9e-138 G protein with an alpha beta hydrolase fold
ALLCAPLI_00238 1.1e-85 spxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
ALLCAPLI_00239 0.0 copA 3.6.3.54 P P-type ATPase
ALLCAPLI_00240 4.8e-66 silP 1.9.3.1, 3.6.3.54 S cog cog4633
ALLCAPLI_00241 6.2e-64 copY K Copper transport repressor, CopY TcrY family
ALLCAPLI_00242 1.4e-187 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
ALLCAPLI_00243 5.2e-193 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
ALLCAPLI_00244 4.4e-142 czcD P cation diffusion facilitator family transporter
ALLCAPLI_00245 1.1e-98 K Transcriptional regulator, TetR family
ALLCAPLI_00246 7.2e-59 S Protein of unknown function with HXXEE motif
ALLCAPLI_00247 3.2e-37
ALLCAPLI_00248 1.6e-152 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
ALLCAPLI_00249 3.4e-152 I Alpha/beta hydrolase family
ALLCAPLI_00250 2.7e-180 1.1.1.1 C nadph quinone reductase
ALLCAPLI_00251 9.5e-66 K Transcriptional regulator
ALLCAPLI_00252 6e-61 pnuC H nicotinamide mononucleotide transporter
ALLCAPLI_00253 1.8e-150 cbiO2 P ABC transporter, ATP-binding protein
ALLCAPLI_00254 3.9e-156 P ATPase activity
ALLCAPLI_00255 2.2e-132 cbiQ P cobalt transport
ALLCAPLI_00256 6.3e-92 2.7.7.65 T Psort location CytoplasmicMembrane, score
ALLCAPLI_00257 3.5e-138 S Phenazine biosynthesis protein
ALLCAPLI_00258 1.6e-264 proWX P ABC transporter
ALLCAPLI_00259 4.7e-126 proV E abc transporter atp-binding protein
ALLCAPLI_00260 3.3e-151 C alcohol dehydrogenase
ALLCAPLI_00261 4.9e-65 mgrA K Transcriptional regulator, MarR family
ALLCAPLI_00262 8.8e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
ALLCAPLI_00263 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
ALLCAPLI_00266 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
ALLCAPLI_00268 8.2e-137 IQ Acetoin reductase
ALLCAPLI_00269 2.2e-45 pspE P Rhodanese-like protein
ALLCAPLI_00270 5.5e-71 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
ALLCAPLI_00271 3.8e-223 XK27_05470 E Methionine synthase
ALLCAPLI_00272 2.4e-256 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
ALLCAPLI_00273 3.2e-221 T PhoQ Sensor
ALLCAPLI_00274 5.1e-119 KT Transcriptional regulatory protein, C terminal
ALLCAPLI_00275 2.1e-146 S TraX protein
ALLCAPLI_00277 5.3e-53 V ABC-2 family transporter protein
ALLCAPLI_00278 2.1e-83 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
ALLCAPLI_00279 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ALLCAPLI_00280 1.1e-155 dprA LU DNA protecting protein DprA
ALLCAPLI_00281 2.7e-150 GK ROK family
ALLCAPLI_00282 3.5e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ALLCAPLI_00283 9.4e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
ALLCAPLI_00284 2.4e-127 K DNA-binding helix-turn-helix protein
ALLCAPLI_00285 6e-83 niaR S small molecule binding protein (contains 3H domain)
ALLCAPLI_00286 2.1e-83
ALLCAPLI_00287 3.8e-274 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ALLCAPLI_00288 4.9e-54 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
ALLCAPLI_00289 5e-125 gntR1 K transcriptional
ALLCAPLI_00290 1.9e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
ALLCAPLI_00291 1.7e-97 rimL J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
ALLCAPLI_00292 2.6e-186 adhP 1.1.1.1 C alcohol dehydrogenase
ALLCAPLI_00293 6.7e-44
ALLCAPLI_00294 2.3e-52
ALLCAPLI_00295 3.8e-265 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ALLCAPLI_00296 6.7e-156 aatB ET ABC transporter substrate-binding protein
ALLCAPLI_00297 4.4e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
ALLCAPLI_00298 3.1e-105 artQ P ABC transporter (Permease
ALLCAPLI_00299 6.6e-59 phnA P Alkylphosphonate utilization operon protein PhnA
ALLCAPLI_00300 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
ALLCAPLI_00301 8.4e-165 cpsY K Transcriptional regulator
ALLCAPLI_00302 1e-125 mur1 3.4.17.14, 3.5.1.28 NU muramidase
ALLCAPLI_00303 4.3e-170 yeiH S Membrane
ALLCAPLI_00305 2.6e-09
ALLCAPLI_00306 2e-283 adcA P Belongs to the bacterial solute-binding protein 9 family
ALLCAPLI_00307 1e-140 XK27_10720 D peptidase activity
ALLCAPLI_00308 1.8e-275 pepD E Dipeptidase
ALLCAPLI_00309 5.7e-161 whiA K May be required for sporulation
ALLCAPLI_00310 5.3e-181 ybhK S Required for morphogenesis under gluconeogenic growth conditions
ALLCAPLI_00311 5.5e-161 rapZ S Displays ATPase and GTPase activities
ALLCAPLI_00312 1.9e-133 yejC S cyclic nucleotide-binding protein
ALLCAPLI_00313 1.8e-201 D nuclear chromosome segregation
ALLCAPLI_00314 1.4e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
ALLCAPLI_00315 1.5e-132 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
ALLCAPLI_00316 8.2e-81 queD 4.1.2.50, 4.2.3.12 H synthase
ALLCAPLI_00317 1.2e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ALLCAPLI_00318 2.3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
ALLCAPLI_00319 3.1e-199 pmrB EGP Major facilitator Superfamily
ALLCAPLI_00320 8.2e-19
ALLCAPLI_00321 8.4e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
ALLCAPLI_00322 7e-212 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
ALLCAPLI_00323 2.7e-77 ypmB S Protein conserved in bacteria
ALLCAPLI_00324 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
ALLCAPLI_00325 8e-114 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
ALLCAPLI_00326 1.6e-169 yufQ S Belongs to the binding-protein-dependent transport system permease family
ALLCAPLI_00327 1.9e-176 yufP S Belongs to the binding-protein-dependent transport system permease family
ALLCAPLI_00328 3.5e-280 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
ALLCAPLI_00329 4.7e-191 tcsA S membrane
ALLCAPLI_00330 1.6e-67 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
ALLCAPLI_00331 1.8e-111 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ALLCAPLI_00332 1.9e-231 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
ALLCAPLI_00333 2e-103 rsmC 2.1.1.172 J Methyltransferase small domain protein
ALLCAPLI_00334 2.6e-169 coaA 2.7.1.33 F Pantothenic acid kinase
ALLCAPLI_00335 2.3e-29 rpsT J Binds directly to 16S ribosomal RNA
ALLCAPLI_00336 1.3e-236 T PhoQ Sensor
ALLCAPLI_00337 2.1e-120 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
ALLCAPLI_00338 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
ALLCAPLI_00339 7.1e-116 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
ALLCAPLI_00340 3.1e-90 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ALLCAPLI_00341 2.7e-92 panT S ECF transporter, substrate-specific component
ALLCAPLI_00342 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
ALLCAPLI_00343 2.2e-162 metF 1.5.1.20 E reductase
ALLCAPLI_00344 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ALLCAPLI_00346 2.4e-311 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
ALLCAPLI_00347 0.0 3.6.3.8 P cation transport ATPase
ALLCAPLI_00348 3.1e-234 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
ALLCAPLI_00349 2.2e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
ALLCAPLI_00350 1.1e-234 dltB M Membrane protein involved in D-alanine export
ALLCAPLI_00351 2.1e-296 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
ALLCAPLI_00352 8.6e-10 S D-Ala-teichoic acid biosynthesis protein
ALLCAPLI_00353 0.0 XK27_10035 V abc transporter atp-binding protein
ALLCAPLI_00354 2.3e-288 yfiB1 V abc transporter atp-binding protein
ALLCAPLI_00355 1.2e-98 pvaA M lytic transglycosylase activity
ALLCAPLI_00356 4.6e-177 ndpA S 37-kD nucleoid-associated bacterial protein
ALLCAPLI_00357 2.7e-230 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ALLCAPLI_00358 5.1e-102 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
ALLCAPLI_00359 3e-140 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
ALLCAPLI_00360 1.1e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ALLCAPLI_00361 3.9e-110 tdk 2.7.1.21 F thymidine kinase
ALLCAPLI_00362 4.8e-185 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ALLCAPLI_00363 2.4e-152 gst O Glutathione S-transferase
ALLCAPLI_00364 3.8e-176 nrnA 3.1.13.3, 3.1.3.7 S domain protein
ALLCAPLI_00365 1.3e-173 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
ALLCAPLI_00366 4.4e-45 rpmE2 J 50S ribosomal protein L31
ALLCAPLI_00367 4.7e-230 mntH P Mn2 and Fe2 transporters of the NRAMP family
ALLCAPLI_00368 1.6e-161 ypuA S secreted protein
ALLCAPLI_00369 1.2e-70 yaeR E COG0346 Lactoylglutathione lyase and related lyases
ALLCAPLI_00370 7.9e-132 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
ALLCAPLI_00371 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ALLCAPLI_00372 1.6e-180 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
ALLCAPLI_00373 1.4e-256 noxE P NADH oxidase
ALLCAPLI_00374 1.1e-294 yfmM S abc transporter atp-binding protein
ALLCAPLI_00375 1.7e-80 XK27_01265 S ECF-type riboflavin transporter, S component
ALLCAPLI_00376 1.1e-153 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
ALLCAPLI_00377 7.7e-83 S ECF-type riboflavin transporter, S component
ALLCAPLI_00379 1.4e-234 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
ALLCAPLI_00380 7e-56 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
ALLCAPLI_00382 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
ALLCAPLI_00383 4.9e-93 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
ALLCAPLI_00384 8.7e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ALLCAPLI_00385 1.3e-22 WQ51_00220 K Helix-turn-helix domain
ALLCAPLI_00386 7e-90 S Protein of unknown function (DUF3278)
ALLCAPLI_00387 0.0 smc D Required for chromosome condensation and partitioning
ALLCAPLI_00388 2.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
ALLCAPLI_00389 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ALLCAPLI_00390 3.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ALLCAPLI_00391 1.5e-118 alkD L Dna alkylation repair
ALLCAPLI_00392 5.2e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ALLCAPLI_00393 3.4e-86 pat 2.3.1.183 M acetyltransferase
ALLCAPLI_00394 4.3e-264 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ALLCAPLI_00395 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
ALLCAPLI_00396 1e-125 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
ALLCAPLI_00397 1.6e-103
ALLCAPLI_00398 2.5e-121 sdaAB 4.3.1.17 E L-serine dehydratase
ALLCAPLI_00399 5.8e-147 sdaAA 4.3.1.17 E L-serine dehydratase
ALLCAPLI_00400 0.0 fruA 3.2.1.1, 3.2.1.26, 3.2.1.65, 3.2.1.80 GH13,GH32 G Belongs to the glycosyl hydrolase 32 family
ALLCAPLI_00401 2.5e-72 yjlA EG membrane
ALLCAPLI_00402 1.8e-78 yjlA EG membrane
ALLCAPLI_00403 1.6e-75 3.4.21.89 S RDD family
ALLCAPLI_00404 1.1e-47
ALLCAPLI_00405 5.4e-87
ALLCAPLI_00406 2.3e-24
ALLCAPLI_00407 1.5e-141 S ABC-2 family transporter protein
ALLCAPLI_00408 2.4e-142 S ABC-2 family transporter protein
ALLCAPLI_00409 4.2e-186 S abc transporter atp-binding protein
ALLCAPLI_00412 2.5e-85 yfjR K regulation of single-species biofilm formation
ALLCAPLI_00413 9.1e-130 S Protein of unknown function DUF262
ALLCAPLI_00414 5.7e-206 S Protein of unknown function DUF262
ALLCAPLI_00415 3.3e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
ALLCAPLI_00416 7e-190 desK 2.7.13.3 T Histidine kinase
ALLCAPLI_00417 2.9e-131 yvfS V ABC-2 type transporter
ALLCAPLI_00418 4.3e-158 XK27_09825 V abc transporter atp-binding protein
ALLCAPLI_00421 4.1e-170 fabH 2.3.1.180 I synthase III
ALLCAPLI_00422 1.5e-236 6.2.1.30 H Coenzyme F390 synthetase
ALLCAPLI_00423 1.9e-152 gumP S Metallo-beta-lactamase superfamily
ALLCAPLI_00424 7.6e-180 ybjS 1.1.1.133, 5.1.3.13 M NAD dependent epimerase dehydratase family protein
ALLCAPLI_00425 3.6e-230 2.4.1.276 GT1 CG Glycosyltransferase family 28 C-terminal domain
ALLCAPLI_00426 1.3e-105 1.1.1.105 S Belongs to the short-chain dehydrogenases reductases (SDR) family
ALLCAPLI_00427 1.1e-169 ugcG 2.4.1.80 GT21 M transferase activity, transferring glycosyl groups
ALLCAPLI_00428 3.4e-94
ALLCAPLI_00429 2.1e-209 2.4.1.276 GT1 CG transferase activity, transferring hexosyl groups
ALLCAPLI_00431 4.1e-240 anK3 G response to abiotic stimulus
ALLCAPLI_00432 0.0 hscC O Belongs to the heat shock protein 70 family
ALLCAPLI_00433 5.1e-165 yocS S Transporter
ALLCAPLI_00434 1.4e-83 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
ALLCAPLI_00435 9.9e-132 yvfS V Transporter
ALLCAPLI_00436 8.5e-154 XK27_09825 V abc transporter atp-binding protein
ALLCAPLI_00437 5.4e-15 liaI KT membrane
ALLCAPLI_00438 4.4e-30 liaI KT membrane
ALLCAPLI_00439 1.4e-92 XK27_05000 S metal cluster binding
ALLCAPLI_00440 0.0 V ABC transporter (permease)
ALLCAPLI_00441 7.1e-133 macB2 V ABC transporter, ATP-binding protein
ALLCAPLI_00442 1.8e-160 T Histidine kinase
ALLCAPLI_00443 5.4e-124 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
ALLCAPLI_00444 6.7e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
ALLCAPLI_00445 1.5e-220 pbuX F xanthine permease
ALLCAPLI_00446 5.6e-273 V (ABC) transporter
ALLCAPLI_00447 3.7e-143 K sequence-specific DNA binding
ALLCAPLI_00448 3.9e-243 norM V Multidrug efflux pump
ALLCAPLI_00450 3.2e-183 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ALLCAPLI_00451 3.4e-231 brnQ E Component of the transport system for branched-chain amino acids
ALLCAPLI_00452 1.7e-181 manA 5.3.1.8 G mannose-6-phosphate isomerase
ALLCAPLI_00453 1.8e-59 S Protein of unknown function (DUF3290)
ALLCAPLI_00454 1.5e-107 S Protein of unknown function (DUF421)
ALLCAPLI_00455 1.4e-16 csbD S CsbD-like
ALLCAPLI_00456 4.6e-91 S Carbohydrate-binding domain-containing protein Cthe_2159
ALLCAPLI_00457 5e-37 XK27_01300 P Protein conserved in bacteria
ALLCAPLI_00458 1.8e-222 yfnA E amino acid
ALLCAPLI_00459 0.0 S dextransucrase activity
ALLCAPLI_00460 1e-84 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
ALLCAPLI_00461 2e-42 S Sugar efflux transporter for intercellular exchange
ALLCAPLI_00462 1.6e-205 P FtsX-like permease family
ALLCAPLI_00463 3.9e-122 V abc transporter atp-binding protein
ALLCAPLI_00464 8.1e-97 K WHG domain
ALLCAPLI_00465 1.2e-169 ydhF S Aldo keto reductase
ALLCAPLI_00466 9.1e-207 natB CP ABC-type Na efflux pump, permease component
ALLCAPLI_00467 4.8e-165 natA S abc transporter atp-binding protein
ALLCAPLI_00468 1.2e-08 S Protein of unknown function (DUF3169)
ALLCAPLI_00469 2.5e-27 XK27_07105 K transcriptional
ALLCAPLI_00470 2.1e-38
ALLCAPLI_00471 5.1e-110 XK27_02070 S nitroreductase
ALLCAPLI_00472 2.9e-151 1.13.11.2 S glyoxalase
ALLCAPLI_00473 1.5e-74 ywnA K Transcriptional regulator
ALLCAPLI_00474 7e-153 E Alpha/beta hydrolase of unknown function (DUF915)
ALLCAPLI_00475 1.1e-226 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
ALLCAPLI_00476 1.6e-166 bcrA V abc transporter atp-binding protein
ALLCAPLI_00477 2.9e-126 S ABC-2 family transporter protein
ALLCAPLI_00478 1.5e-131 T PhoQ Sensor
ALLCAPLI_00479 1.3e-125 T Xre family transcriptional regulator
ALLCAPLI_00480 1.1e-110 drgA C nitroreductase
ALLCAPLI_00481 2.8e-96 yoaK S Protein of unknown function (DUF1275)
ALLCAPLI_00482 2.2e-38 DJ nuclease activity
ALLCAPLI_00483 7.9e-29 XK27_10490
ALLCAPLI_00484 3.1e-153 yvgN C reductase
ALLCAPLI_00486 6.8e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
ALLCAPLI_00487 2e-240 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
ALLCAPLI_00488 9e-220 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ALLCAPLI_00489 2.3e-147 galR K Transcriptional regulator
ALLCAPLI_00490 2.5e-297 dexB 3.2.1.10, 3.2.1.70 GH13 G COG0366 Glycosidases
ALLCAPLI_00491 6.5e-227 vncS 2.7.13.3 T Histidine kinase
ALLCAPLI_00492 5.2e-116 K Response regulator receiver domain protein
ALLCAPLI_00493 1.4e-235 vex3 V Efflux ABC transporter, permease protein
ALLCAPLI_00494 1.4e-105 vex2 V abc transporter atp-binding protein
ALLCAPLI_00495 2.3e-173 vex1 V Efflux ABC transporter, permease protein
ALLCAPLI_00496 8.6e-284 XK27_07020 S Belongs to the UPF0371 family
ALLCAPLI_00498 3.1e-198 gldA 1.1.1.6 C glycerol dehydrogenase
ALLCAPLI_00499 2.2e-182 XK27_10475 S oxidoreductase
ALLCAPLI_00500 5.7e-59 dhaM 2.7.1.121 S dihydroxyacetone kinase, phosphotransfer subunit
ALLCAPLI_00501 1.5e-95 dhaL 2.7.1.121 S Dihydroxyacetone kinase
ALLCAPLI_00502 1.9e-178 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dihydroxyacetone kinase
ALLCAPLI_00503 2.8e-227 thrE K Psort location CytoplasmicMembrane, score
ALLCAPLI_00504 0.0 M Putative cell wall binding repeat
ALLCAPLI_00505 3.5e-133 T Ser Thr phosphatase family protein
ALLCAPLI_00506 7.1e-34 S Immunity protein 41
ALLCAPLI_00507 0.0 pepO 3.4.24.71 O Peptidase family M13
ALLCAPLI_00508 1.2e-07 S Enterocin A Immunity
ALLCAPLI_00509 1.6e-15 S integral membrane protein
ALLCAPLI_00510 4.2e-43 czrA K helix_turn_helix, Arsenical Resistance Operon Repressor
ALLCAPLI_00511 5.1e-112 yhfC S Putative membrane peptidase family (DUF2324)
ALLCAPLI_00512 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
ALLCAPLI_00514 1.7e-258 S dextransucrase activity
ALLCAPLI_00515 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
ALLCAPLI_00516 0.0 S dextransucrase activity
ALLCAPLI_00517 0.0 S dextransucrase activity
ALLCAPLI_00518 1e-102 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
ALLCAPLI_00519 1.8e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
ALLCAPLI_00520 5.4e-302 S dextransucrase activity
ALLCAPLI_00521 2.8e-175 S dextransucrase activity
ALLCAPLI_00522 0.0 S dextransucrase activity
ALLCAPLI_00523 0.0 M Putative cell wall binding repeat
ALLCAPLI_00524 1.1e-225 S dextransucrase activity
ALLCAPLI_00525 0.0 UW LPXTG-motif cell wall anchor domain protein
ALLCAPLI_00527 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ALLCAPLI_00528 1.8e-162 mleP S Sodium Bile acid symporter family
ALLCAPLI_00529 1.1e-310 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme, NAD binding domain
ALLCAPLI_00530 4.7e-47 K Helix-turn-helix
ALLCAPLI_00531 2e-118 mleR K malolactic fermentation system
ALLCAPLI_00532 2.6e-127 XK27_00785 S CAAX protease self-immunity
ALLCAPLI_00533 6.4e-233 EGP Major facilitator Superfamily
ALLCAPLI_00534 1.9e-63 rmaI K Transcriptional regulator, MarR family
ALLCAPLI_00535 4.2e-90 maa 2.3.1.79 GK Maltose O-acetyltransferase
ALLCAPLI_00536 2.3e-131 S N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity
ALLCAPLI_00537 0.0 3.5.1.28 M domain protein
ALLCAPLI_00538 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
ALLCAPLI_00539 1.7e-22
ALLCAPLI_00544 0.0 sraP UW Hep Hag repeat protein
ALLCAPLI_00545 1.9e-186 nss M transferase activity, transferring glycosyl groups
ALLCAPLI_00546 3.6e-16 S Accessory secretory protein Sec, Asp5
ALLCAPLI_00547 2.6e-17 S Accessory secretory protein Sec Asp4
ALLCAPLI_00548 1.3e-241 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
ALLCAPLI_00549 3.1e-281 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
ALLCAPLI_00550 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
ALLCAPLI_00551 2.9e-78 asp3 S Accessory Sec system protein Asp3
ALLCAPLI_00552 3e-287 asp2 3.4.11.5 S Accessory Sec system protein Asp2
ALLCAPLI_00553 5.7e-286 asp1 S Accessory Sec system protein Asp1
ALLCAPLI_00554 1.6e-211 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
ALLCAPLI_00555 0.0 M family 8
ALLCAPLI_00556 0.0 sbcC L ATPase involved in DNA repair
ALLCAPLI_00557 8.2e-216 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
ALLCAPLI_00558 0.0 GM domain, Protein
ALLCAPLI_00559 0.0 zmpB M signal peptide protein, YSIRK family
ALLCAPLI_00560 1.5e-30 L PFAM transposase IS116 IS110 IS902 family
ALLCAPLI_00561 9.4e-147 L Transposase
ALLCAPLI_00562 1.7e-27 bipA S protein secretion
ALLCAPLI_00564 1.6e-49 bta 1.8.1.8 CO cell redox homeostasis
ALLCAPLI_00565 6.3e-59 L thioesterase
ALLCAPLI_00566 1.5e-141 S Macro domain protein
ALLCAPLI_00567 5.3e-50 trxA O Belongs to the thioredoxin family
ALLCAPLI_00568 1.3e-70 yccU S CoA-binding protein
ALLCAPLI_00569 1.2e-141 tatD L Hydrolase, tatd
ALLCAPLI_00570 6e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
ALLCAPLI_00571 2.4e-153 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
ALLCAPLI_00573 2.5e-158 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
ALLCAPLI_00574 6.6e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
ALLCAPLI_00575 2.8e-114 thiN 2.7.6.2 H thiamine pyrophosphokinase
ALLCAPLI_00576 1.8e-168 rmuC S RmuC domain protein
ALLCAPLI_00577 1.2e-177 cbf S 3'-5' exoribonuclease yhaM
ALLCAPLI_00578 4e-142 purR 2.4.2.7 F operon repressor
ALLCAPLI_00579 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ALLCAPLI_00580 3.9e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
ALLCAPLI_00581 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ALLCAPLI_00582 7.1e-181 gap 1.2.1.12 C Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
ALLCAPLI_00583 3.6e-115
ALLCAPLI_00584 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
ALLCAPLI_00585 9.6e-86 S Fusaric acid resistance protein-like
ALLCAPLI_00586 8.5e-63 glnR K Transcriptional regulator
ALLCAPLI_00587 5.2e-264 glnA 6.3.1.2 E glutamine synthetase
ALLCAPLI_00588 1.5e-115 pscB M CHAP domain protein
ALLCAPLI_00589 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ALLCAPLI_00590 1.5e-33 ykzG S Belongs to the UPF0356 family
ALLCAPLI_00591 2.2e-117 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
ALLCAPLI_00592 1.1e-72 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
ALLCAPLI_00593 1.3e-185 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ALLCAPLI_00594 5.7e-113 azlC E AzlC protein
ALLCAPLI_00595 4.4e-47 azlD S branched-chain amino acid
ALLCAPLI_00596 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
ALLCAPLI_00597 6.1e-106 lepB 3.4.21.89 U Belongs to the peptidase S26 family
ALLCAPLI_00598 3.8e-154 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ALLCAPLI_00599 9.3e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
ALLCAPLI_00600 1e-88 cvpA S toxin biosynthetic process
ALLCAPLI_00601 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
ALLCAPLI_00602 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ALLCAPLI_00604 1.7e-37
ALLCAPLI_00605 4.5e-10
ALLCAPLI_00607 1.4e-217 mutY L A G-specific adenine glycosylase
ALLCAPLI_00608 5.5e-42 XK27_05745
ALLCAPLI_00609 1.1e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
ALLCAPLI_00610 2.5e-81 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
ALLCAPLI_00611 1.7e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ALLCAPLI_00613 8.5e-122 XK27_01040 S Protein of unknown function (DUF1129)
ALLCAPLI_00614 6.5e-168 corA P COG0598 Mg2 and Co2 transporters
ALLCAPLI_00615 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ALLCAPLI_00622 1.6e-146 V 'abc transporter, ATP-binding protein
ALLCAPLI_00624 1.6e-186 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
ALLCAPLI_00625 1.3e-84 comEB 3.5.4.12 F ComE operon protein 2
ALLCAPLI_00626 7.1e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ALLCAPLI_00627 1.7e-61 yqhY S protein conserved in bacteria
ALLCAPLI_00628 6.8e-72 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ALLCAPLI_00629 3.7e-179 scrR K Transcriptional regulator
ALLCAPLI_00630 2.7e-290 scrB 3.2.1.26, 3.2.1.80 GH32 G invertase
ALLCAPLI_00631 0.0 scrA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
ALLCAPLI_00632 2.5e-169 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
ALLCAPLI_00633 1.9e-188 manA 5.3.1.8 G mannose-6-phosphate isomerase
ALLCAPLI_00635 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
ALLCAPLI_00636 9.5e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ALLCAPLI_00637 1e-195 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ALLCAPLI_00638 4.7e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
ALLCAPLI_00639 2.1e-202 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ALLCAPLI_00640 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ALLCAPLI_00642 2.3e-159 V ABC transporter
ALLCAPLI_00643 6.6e-123
ALLCAPLI_00647 2.9e-31 yozG K Transcriptional regulator
ALLCAPLI_00649 2.3e-176 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
ALLCAPLI_00650 5.4e-256 XK27_03190 S hydrolases of the HAD superfamily
ALLCAPLI_00651 1.2e-118 yebC M Membrane
ALLCAPLI_00652 1.5e-308 KT response to antibiotic
ALLCAPLI_00653 1.3e-73 XK27_02470 K LytTr DNA-binding domain
ALLCAPLI_00654 8.2e-120 liaI S membrane
ALLCAPLI_00655 4e-43 S Sugar efflux transporter for intercellular exchange
ALLCAPLI_00656 2.6e-194 mccF V LD-carboxypeptidase
ALLCAPLI_00657 3e-298 O MreB/Mbl protein
ALLCAPLI_00659 5.8e-146 V Psort location CytoplasmicMembrane, score
ALLCAPLI_00662 1.5e-13
ALLCAPLI_00663 2.2e-227 dcuS 2.7.13.3 T protein histidine kinase activity
ALLCAPLI_00664 5.4e-232 2.7.13.3 T protein histidine kinase activity
ALLCAPLI_00665 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
ALLCAPLI_00666 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
ALLCAPLI_00667 3.6e-126 S Protein of unknown function (DUF554)
ALLCAPLI_00668 1.5e-132 ecsA_2 V abc transporter atp-binding protein
ALLCAPLI_00669 2.3e-266 XK27_00765
ALLCAPLI_00670 2.6e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ALLCAPLI_00671 3.5e-222 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ALLCAPLI_00672 3.2e-60 yhaI J Membrane
ALLCAPLI_00673 2.3e-32 yhaI J Protein of unknown function (DUF805)
ALLCAPLI_00674 3.4e-62 yhaI J Protein of unknown function (DUF805)
ALLCAPLI_00675 1.3e-45 yhaI J Protein of unknown function (DUF805)
ALLCAPLI_00677 8.4e-92
ALLCAPLI_00678 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
ALLCAPLI_00679 2.4e-45 ftsL D cell division protein FtsL
ALLCAPLI_00680 0.0 ftsI 3.4.16.4 M penicillin-binding protein
ALLCAPLI_00681 1.1e-184 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ALLCAPLI_00682 9.8e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
ALLCAPLI_00684 8.2e-257 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
ALLCAPLI_00685 5.6e-63 yutD J protein conserved in bacteria
ALLCAPLI_00686 1.8e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
ALLCAPLI_00687 9.7e-89 XK27_09885 V Glycopeptide antibiotics resistance protein
ALLCAPLI_00689 0.0 mdlA V abc transporter atp-binding protein
ALLCAPLI_00690 0.0 mdlB V abc transporter atp-binding protein
ALLCAPLI_00696 1.8e-44 spiA K sequence-specific DNA binding
ALLCAPLI_00697 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
ALLCAPLI_00698 5.6e-150 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
ALLCAPLI_00699 1.2e-94 V CAAX protease self-immunity
ALLCAPLI_00700 4.7e-137 cppA E CppA N-terminal
ALLCAPLI_00701 8.2e-171 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
ALLCAPLI_00703 9.3e-72 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
ALLCAPLI_00704 3.3e-141 cah 4.2.1.1 P carbonic anhydrase
ALLCAPLI_00705 0.0 pflB 2.3.1.54 C formate acetyltransferase'
ALLCAPLI_00706 2.8e-202 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ALLCAPLI_00707 1e-34
ALLCAPLI_00708 1.3e-151 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
ALLCAPLI_00709 2.8e-160 yxeN P ABC transporter (Permease
ALLCAPLI_00710 5.2e-128 tcyN 3.6.3.21 E abc transporter atp-binding protein
ALLCAPLI_00711 5e-10 S Protein of unknown function (DUF4059)
ALLCAPLI_00712 2.1e-171 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
ALLCAPLI_00713 1.6e-91 rsmD 2.1.1.171 L Methyltransferase
ALLCAPLI_00714 1.1e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ALLCAPLI_00715 6.4e-188 ylbL T Belongs to the peptidase S16 family
ALLCAPLI_00716 2.3e-181 yhcC S radical SAM protein
ALLCAPLI_00717 5.2e-93 ytqB 2.1.1.176 J (SAM)-dependent
ALLCAPLI_00719 0.0 yjcE P NhaP-type Na H and K H antiporters
ALLCAPLI_00720 6e-25
ALLCAPLI_00722 1.5e-141 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
ALLCAPLI_00723 1.9e-237 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
ALLCAPLI_00724 6.2e-09 MU outer membrane autotransporter barrel domain protein
ALLCAPLI_00725 1.5e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ALLCAPLI_00727 9e-75 XK27_03180 T universal stress protein
ALLCAPLI_00728 1.7e-237 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
ALLCAPLI_00729 8.1e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
ALLCAPLI_00730 4.1e-98 pncA Q isochorismatase
ALLCAPLI_00731 1.3e-292 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
ALLCAPLI_00732 1.3e-216 M lipopolysaccharide 3-alpha-galactosyltransferase activity
ALLCAPLI_00733 2.2e-157 H COG0463 Glycosyltransferases involved in cell wall biogenesis
ALLCAPLI_00734 1.5e-186 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
ALLCAPLI_00735 5.2e-233 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
ALLCAPLI_00736 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ALLCAPLI_00737 1.3e-268 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
ALLCAPLI_00738 1e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ALLCAPLI_00740 5.4e-283 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
ALLCAPLI_00741 3.7e-13 S PQ loop repeat
ALLCAPLI_00742 1.6e-46 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIB subunit
ALLCAPLI_00743 8.2e-274 celR 2.7.1.194, 2.7.1.202, 2.7.1.204 GKT Mga helix-turn-helix domain
ALLCAPLI_00744 5e-40 celC 2.7.1.196, 2.7.1.205 G Phosphotransferase system cellobiose-specific component IIA
ALLCAPLI_00745 5e-58
ALLCAPLI_00746 2e-215 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
ALLCAPLI_00747 1.2e-64
ALLCAPLI_00748 1.2e-150 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
ALLCAPLI_00749 5.1e-98 yqeG S hydrolase of the HAD superfamily
ALLCAPLI_00750 6e-213 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
ALLCAPLI_00751 7.7e-49 yhbY J RNA-binding protein
ALLCAPLI_00752 1.2e-117 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ALLCAPLI_00753 1.1e-104 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
ALLCAPLI_00754 7.6e-83 entB 3.5.1.19 Q Isochorismatase family
ALLCAPLI_00755 1.7e-57 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
ALLCAPLI_00756 1.3e-139 yqeM Q Methyltransferase domain protein
ALLCAPLI_00757 5.5e-208 T Nacht domain
ALLCAPLI_00758 7.7e-197 ylbM S Belongs to the UPF0348 family
ALLCAPLI_00759 7.6e-39 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
ALLCAPLI_00760 1e-43 yoeB S Addiction module toxin, Txe YoeB family
ALLCAPLI_00761 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
ALLCAPLI_00763 2.5e-54
ALLCAPLI_00764 4.2e-58 S CD20-like family
ALLCAPLI_00765 2.6e-225 L Transposase
ALLCAPLI_00766 4.2e-12
ALLCAPLI_00767 1.1e-71 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
ALLCAPLI_00768 8.9e-133 ecsA V abc transporter atp-binding protein
ALLCAPLI_00769 4.6e-175 ecsB U Bacterial ABC transporter protein EcsB
ALLCAPLI_00770 2.7e-151 ytmP 2.7.1.89 M Phosphotransferase
ALLCAPLI_00771 7.8e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
ALLCAPLI_00773 2e-219 ytfP S Flavoprotein
ALLCAPLI_00774 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
ALLCAPLI_00775 9.6e-64 XK27_02560 S cog cog2151
ALLCAPLI_00776 2.6e-41 WQ51_02910 S Protein of unknown function, DUF536
ALLCAPLI_00777 2.4e-104 dnaQ 2.7.7.7 L DNA polymerase III
ALLCAPLI_00778 3.6e-126 K transcriptional regulator, MerR family
ALLCAPLI_00779 0.0 V ABC transporter (Permease
ALLCAPLI_00780 1.9e-124 V abc transporter atp-binding protein
ALLCAPLI_00782 8.7e-42 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ALLCAPLI_00783 5.7e-43
ALLCAPLI_00784 2.9e-50
ALLCAPLI_00785 1.1e-44
ALLCAPLI_00786 7.1e-76
ALLCAPLI_00787 2.6e-93
ALLCAPLI_00788 8.9e-107 E IrrE N-terminal-like domain
ALLCAPLI_00789 7.6e-110 K Peptidase S24-like protein
ALLCAPLI_00790 1.1e-77
ALLCAPLI_00791 0.0
ALLCAPLI_00792 0.0 bcsA 2.4.1.12 GT2 M COG1215 Glycosyltransferases, probably involved in cell wall biogenesis
ALLCAPLI_00793 6.8e-150 2.4.1.83 GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
ALLCAPLI_00794 1.3e-20 2.4.1.83 GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
ALLCAPLI_00795 6.2e-164 T Diguanylate cyclase
ALLCAPLI_00796 1.1e-11 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
ALLCAPLI_00797 2.1e-59 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
ALLCAPLI_00798 1.5e-26 3.2.1.26 GH32 G Psort location Cytoplasmic, score
ALLCAPLI_00799 0.0 ctpE P E1-E2 ATPase
ALLCAPLI_00800 2.2e-58
ALLCAPLI_00801 1.2e-40 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
ALLCAPLI_00802 4.1e-256 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ALLCAPLI_00803 5.7e-103 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
ALLCAPLI_00804 8.7e-179 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ALLCAPLI_00805 1.8e-131 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
ALLCAPLI_00806 5.1e-99 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
ALLCAPLI_00807 3.4e-230 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
ALLCAPLI_00808 3.3e-141 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
ALLCAPLI_00811 4.2e-74 copY K negative regulation of transcription, DNA-templated
ALLCAPLI_00812 0.0 copA 3.6.3.54 P P-type ATPase
ALLCAPLI_00813 2.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
ALLCAPLI_00814 1e-190 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
ALLCAPLI_00815 3.9e-114 papP P ABC transporter (Permease
ALLCAPLI_00816 3e-106 P ABC transporter (Permease
ALLCAPLI_00817 1.5e-135 glnQ 3.6.3.21 E abc transporter atp-binding protein
ALLCAPLI_00818 8.8e-156 cjaA ET ABC transporter substrate-binding protein
ALLCAPLI_00822 3.5e-255 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
ALLCAPLI_00823 2.1e-117 ywaF S Integral membrane protein (intg_mem_TP0381)
ALLCAPLI_00824 2.3e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
ALLCAPLI_00825 2.4e-96 thiT S Thiamine transporter
ALLCAPLI_00826 9.6e-62 yjqA S Bacterial PH domain
ALLCAPLI_00827 2.8e-152 corA P CorA-like protein
ALLCAPLI_00828 3.4e-254 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
ALLCAPLI_00829 1e-41 yazA L endonuclease containing a URI domain
ALLCAPLI_00830 4.6e-140 yabB 2.1.1.223 L Methyltransferase
ALLCAPLI_00831 7.4e-148 nodB3 G Polysaccharide deacetylase
ALLCAPLI_00832 1.3e-142 plsC 2.3.1.51 I Acyltransferase
ALLCAPLI_00833 3.7e-88 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
ALLCAPLI_00834 0.0 comEC S Competence protein ComEC
ALLCAPLI_00835 1e-229 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ALLCAPLI_00836 5.3e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
ALLCAPLI_00837 7.3e-231 ytoI K transcriptional regulator containing CBS domains
ALLCAPLI_00838 1.1e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
ALLCAPLI_00839 1.1e-159 rbn E Belongs to the UPF0761 family
ALLCAPLI_00840 4.8e-85 ccl S cog cog4708
ALLCAPLI_00841 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ALLCAPLI_00842 2.4e-184 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
ALLCAPLI_00844 6.7e-176 yfjR K regulation of single-species biofilm formation
ALLCAPLI_00846 4.4e-72 S QueT transporter
ALLCAPLI_00847 2.6e-157 xth 3.1.11.2 L exodeoxyribonuclease III
ALLCAPLI_00849 2.9e-17 yjdB S Domain of unknown function (DUF4767)
ALLCAPLI_00850 3.1e-164 tehB 2.1.1.265 PQ tellurite resistance protein tehb
ALLCAPLI_00851 6.3e-168 O protein import
ALLCAPLI_00852 4.2e-122 agrA KT phosphorelay signal transduction system
ALLCAPLI_00853 3.9e-211 2.7.13.3 T protein histidine kinase activity
ALLCAPLI_00855 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
ALLCAPLI_00856 1.5e-36 ylqC L Belongs to the UPF0109 family
ALLCAPLI_00857 1.9e-234 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
ALLCAPLI_00858 0.0 ydaO E amino acid
ALLCAPLI_00859 7.7e-100 folE 3.5.4.16 F gtp cyclohydrolase
ALLCAPLI_00860 7.7e-146 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ALLCAPLI_00861 1.1e-294 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
ALLCAPLI_00862 2.9e-60 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ALLCAPLI_00863 9.4e-78 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ALLCAPLI_00864 5.8e-166 murB 1.3.1.98 M cell wall formation
ALLCAPLI_00865 6.8e-212 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
ALLCAPLI_00866 1.1e-139 potB P ABC-type spermidine putrescine transport system, permease component I
ALLCAPLI_00867 8.9e-131 potC P ABC-type spermidine putrescine transport system, permease component II
ALLCAPLI_00868 2.7e-202 potD P spermidine putrescine ABC transporter
ALLCAPLI_00869 1.9e-145 XK27_08050 O HflC and HflK could regulate a protease
ALLCAPLI_00870 1.8e-71 gloA 4.4.1.5 E Lactoylglutathione lyase
ALLCAPLI_00871 6.8e-159 GK ROK family
ALLCAPLI_00872 3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ALLCAPLI_00873 1e-104 wecD M Acetyltransferase (GNAT) domain
ALLCAPLI_00874 2e-219 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ALLCAPLI_00875 7.8e-72 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
ALLCAPLI_00876 7e-59 arsC 1.20.4.1 P Belongs to the ArsC family
ALLCAPLI_00878 1e-55 lrgA S Effector of murein hydrolase LrgA
ALLCAPLI_00879 1.6e-115 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like proteins CidA and or CidB. The LrgAB and CidAB proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
ALLCAPLI_00880 5.5e-98 3.1.3.18 S IA, variant 1
ALLCAPLI_00881 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ALLCAPLI_00882 6.4e-299 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
ALLCAPLI_00883 1.3e-111 serB 3.1.3.3 E phosphoserine phosphatase
ALLCAPLI_00884 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
ALLCAPLI_00885 1.4e-161 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
ALLCAPLI_00886 3.2e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
ALLCAPLI_00887 1e-103 csn2 S CRISPR-associated protein (Cas_Csn2)
ALLCAPLI_00888 8.5e-08 N PFAM Uncharacterised protein family UPF0150
ALLCAPLI_00889 1.3e-149 EG Permeases of the drug metabolite transporter (DMT) superfamily
ALLCAPLI_00891 3.5e-61 ycaO O OsmC-like protein
ALLCAPLI_00892 4.3e-62 paaI Q protein possibly involved in aromatic compounds catabolism
ALLCAPLI_00893 9.8e-10 O ADP-ribosylglycohydrolase
ALLCAPLI_00894 1.6e-126 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
ALLCAPLI_00896 8.8e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ALLCAPLI_00897 1.7e-17 XK27_00735
ALLCAPLI_00898 3.9e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
ALLCAPLI_00899 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
ALLCAPLI_00900 1.1e-164 S CAAX amino terminal protease family protein
ALLCAPLI_00902 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
ALLCAPLI_00903 2.3e-81 mutT 3.6.1.55 F Nudix family
ALLCAPLI_00904 2.9e-132 ET ABC transporter
ALLCAPLI_00905 1.6e-135 ET Belongs to the bacterial solute-binding protein 3 family
ALLCAPLI_00906 2e-205 arcT 2.6.1.1 E Aminotransferase
ALLCAPLI_00907 1e-129 gltS ET Belongs to the bacterial solute-binding protein 3 family
ALLCAPLI_00908 3.2e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
ALLCAPLI_00909 6.4e-50 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
ALLCAPLI_00910 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
ALLCAPLI_00911 4e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
ALLCAPLI_00912 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
ALLCAPLI_00913 2e-169 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
ALLCAPLI_00914 2.7e-261 S Glucosyl transferase GtrII
ALLCAPLI_00915 1e-159 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
ALLCAPLI_00916 6.7e-221 amrA S membrane protein involved in the export of O-antigen and teichoic acid
ALLCAPLI_00917 4.3e-183 S Glycosyltransferase like family 2
ALLCAPLI_00918 5.2e-181 cpsIaJ S Glycosyltransferase like family 2
ALLCAPLI_00919 7e-127 arnC M group 2 family protein
ALLCAPLI_00920 3.2e-43 S Uncharacterized conserved protein (DUF2304)
ALLCAPLI_00921 2e-151 2.4.1.60 S Glycosyltransferase group 2 family protein
ALLCAPLI_00922 0.0 rgpF GT2,GT4 M Glycosyltransferase like family 2
ALLCAPLI_00923 1.1e-218 M Psort location CytoplasmicMembrane, score
ALLCAPLI_00924 2.6e-225 GT4 M transferase activity, transferring glycosyl groups
ALLCAPLI_00925 1.6e-224 rgpA GT4 M Domain of unknown function (DUF1972)
ALLCAPLI_00926 1.9e-172 rgpB GT2 M Glycosyltransferase, group 2 family protein
ALLCAPLI_00927 8.9e-142 rgpC GM Transport permease protein
ALLCAPLI_00928 2.8e-224 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
ALLCAPLI_00929 6e-278 rgpF M Rhamnan synthesis protein F
ALLCAPLI_00930 1.3e-117 radC E Belongs to the UPF0758 family
ALLCAPLI_00931 4.4e-129 puuD T peptidase C26
ALLCAPLI_00932 1.9e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
ALLCAPLI_00933 8.2e-60 XK27_04120 S Putative amino acid metabolism
ALLCAPLI_00934 2.4e-206 iscS 2.8.1.7 E Cysteine desulfurase
ALLCAPLI_00935 8.7e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ALLCAPLI_00936 2.4e-101 yjbK S Adenylate cyclase
ALLCAPLI_00937 2e-118 yjbM 2.7.6.5 S Gtp pyrophosphokinase
ALLCAPLI_00938 7.5e-152 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ALLCAPLI_00939 9.2e-172 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
ALLCAPLI_00940 1.3e-174 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
ALLCAPLI_00941 0.0 amiA E ABC transporter, substrate-binding protein, family 5
ALLCAPLI_00942 1.6e-309 amiA E ABC transporter, substrate-binding protein, family 5
ALLCAPLI_00943 2.1e-277 amiC P ABC transporter (Permease
ALLCAPLI_00944 3.5e-166 amiD P ABC transporter (Permease
ALLCAPLI_00945 1.3e-201 oppD P Belongs to the ABC transporter superfamily
ALLCAPLI_00946 3.1e-170 oppF P Belongs to the ABC transporter superfamily
ALLCAPLI_00947 1.3e-87
ALLCAPLI_00950 1.9e-107 S Domain of Unknown Function with PDB structure (DUF3862)
ALLCAPLI_00951 6.4e-117 M Pfam SNARE associated Golgi protein
ALLCAPLI_00952 1.7e-229 murN 2.3.2.16 V FemAB family
ALLCAPLI_00953 1.1e-170 S oxidoreductase
ALLCAPLI_00954 6.2e-48 XK27_09445 S Domain of unknown function (DUF1827)
ALLCAPLI_00955 2.2e-84 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
ALLCAPLI_00956 0.0 clpE O Belongs to the ClpA ClpB family
ALLCAPLI_00957 1.2e-180 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ALLCAPLI_00958 1e-34 ykuJ S protein conserved in bacteria
ALLCAPLI_00959 1.7e-117 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
ALLCAPLI_00960 3.2e-130 glnQ 3.6.3.21 E abc transporter atp-binding protein
ALLCAPLI_00961 1.6e-77 feoA P FeoA domain protein
ALLCAPLI_00962 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
ALLCAPLI_00963 6.6e-08
ALLCAPLI_00964 8e-148 I Alpha/beta hydrolase family
ALLCAPLI_00965 2.4e-153 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ALLCAPLI_00966 1.4e-142 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ALLCAPLI_00967 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
ALLCAPLI_00968 1.7e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ALLCAPLI_00969 7.5e-152 licT K antiterminator
ALLCAPLI_00970 3e-87 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ALLCAPLI_00971 2e-65 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
ALLCAPLI_00972 3.7e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ALLCAPLI_00973 2.4e-150 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
ALLCAPLI_00974 9.5e-101 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ALLCAPLI_00975 3.2e-220 mdtG EGP Major facilitator Superfamily
ALLCAPLI_00976 2e-33 secG U Preprotein translocase subunit SecG
ALLCAPLI_00977 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
ALLCAPLI_00978 6.6e-81 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
ALLCAPLI_00979 1.2e-274 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ALLCAPLI_00980 2.4e-62 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
ALLCAPLI_00981 4.9e-196 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
ALLCAPLI_00982 1.9e-181 ccpA K Catabolite control protein A
ALLCAPLI_00983 1.8e-195 yyaQ S YjbR
ALLCAPLI_00984 9.9e-200 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
ALLCAPLI_00985 1.6e-76 yueI S Protein of unknown function (DUF1694)
ALLCAPLI_00986 7.4e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
ALLCAPLI_00987 1.2e-25 WQ51_00785
ALLCAPLI_00988 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
ALLCAPLI_00989 3.9e-215 ywbD 2.1.1.191 J Methyltransferase
ALLCAPLI_00990 1.9e-116 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
ALLCAPLI_00991 1.4e-153 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ALLCAPLI_00992 5.4e-203 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ALLCAPLI_00993 6.4e-218 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ALLCAPLI_00994 1.3e-204 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
ALLCAPLI_00995 1.6e-52 yheA S Belongs to the UPF0342 family
ALLCAPLI_00996 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
ALLCAPLI_00997 7.5e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
ALLCAPLI_00998 4.5e-80 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ALLCAPLI_00999 1.4e-153 pheA 4.2.1.51 E Prephenate dehydratase
ALLCAPLI_01000 5.6e-248 msrR K Transcriptional regulator
ALLCAPLI_01001 1.2e-153 ydiA P C4-dicarboxylate transporter malic acid transport protein
ALLCAPLI_01002 1.1e-200 I acyl-CoA dehydrogenase
ALLCAPLI_01003 2e-97 mip S hydroperoxide reductase activity
ALLCAPLI_01004 7.9e-252 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ALLCAPLI_01005 5.6e-77 P Mediates zinc uptake. May also transport other divalent cations
ALLCAPLI_01006 2.4e-51 zupT P Mediates zinc uptake. May also transport other divalent cations
ALLCAPLI_01007 5.9e-61 smtB K Transcriptional regulator
ALLCAPLI_01008 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
ALLCAPLI_01010 1.1e-141 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
ALLCAPLI_01011 7.9e-76 XK27_04435 3.5.4.5 J Acetyltransferase GNAT family
ALLCAPLI_01012 1.3e-19
ALLCAPLI_01013 1.8e-57 S Ig-like domain from next to BRCA1 gene
ALLCAPLI_01014 3.4e-29 vrlI K DNA binding domain, excisionase family
ALLCAPLI_01015 1.1e-272 hsdM 2.1.1.72 V Psort location Cytoplasmic, score 8.87
ALLCAPLI_01016 9.7e-58 3.1.21.3 V type I restriction modification DNA specificity domain
ALLCAPLI_01017 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
ALLCAPLI_01018 6.7e-76 S Domain of unknown function (DUF1837)
ALLCAPLI_01019 9.5e-66 O ADP-ribosylglycohydrolase
ALLCAPLI_01020 5.9e-43
ALLCAPLI_01021 3.4e-87
ALLCAPLI_01022 1.3e-205 yeaN P transporter
ALLCAPLI_01023 2.2e-151 yitS S EDD domain protein, DegV family
ALLCAPLI_01024 9.8e-95 XK27_08140 K Bacterial regulatory proteins, tetR family
ALLCAPLI_01025 4.3e-98 ypgQ F HD superfamily hydrolase
ALLCAPLI_01026 9.7e-128 S CAAX amino terminal protease family
ALLCAPLI_01027 2.4e-110 cutC P Participates in the control of copper homeostasis
ALLCAPLI_01029 3.2e-21 S Domain of unknown function (DUF4767)
ALLCAPLI_01030 3.2e-150 S Domain of unknown function (DUF4300)
ALLCAPLI_01031 2.8e-113 V CAAX protease self-immunity
ALLCAPLI_01032 7.9e-159 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ALLCAPLI_01033 2.1e-132 fecE 3.6.3.34 HP ABC transporter
ALLCAPLI_01034 2.5e-173 fatB P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
ALLCAPLI_01035 1e-122 ybbA S Putative esterase
ALLCAPLI_01036 1.1e-156 yegS 2.7.1.107 I Diacylglycerol kinase
ALLCAPLI_01037 2.8e-172 S Domain of unknown function (DUF389)
ALLCAPLI_01038 5.5e-31 S Membrane
ALLCAPLI_01039 2.9e-09 S CsbD-like
ALLCAPLI_01040 9.5e-173 pdhD 1.8.1.4 C Dehydrogenase
ALLCAPLI_01041 3.6e-167 acoA C Acetoin dehydrogenase E1 component subunit alpha
ALLCAPLI_01042 3.9e-174 acoB C dehydrogenase E1 component
ALLCAPLI_01043 3.2e-143 acoC 2.3.1.12, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
ALLCAPLI_01044 8.1e-84 Q Methyltransferase domain
ALLCAPLI_01045 1.3e-73 K TetR family transcriptional regulator
ALLCAPLI_01046 1.2e-46
ALLCAPLI_01047 2.8e-129 V CAAX protease self-immunity
ALLCAPLI_01048 5.2e-11
ALLCAPLI_01049 2e-20 M Bacterial lipoprotein
ALLCAPLI_01050 2.1e-59 S Protein of unknown function (DUF1722)
ALLCAPLI_01051 1.4e-62 yqeB S Pyrimidine dimer DNA glycosylase
ALLCAPLI_01053 8.8e-49
ALLCAPLI_01054 5.1e-89 S CAAX protease self-immunity
ALLCAPLI_01055 2.1e-114 estA E GDSL-like Lipase/Acylhydrolase
ALLCAPLI_01056 2.9e-100
ALLCAPLI_01057 1.2e-273 sulP P Sulfate permease and related transporters (MFS superfamily)
ALLCAPLI_01058 6.4e-148 ycgQ S TIGR03943 family
ALLCAPLI_01059 6.6e-154 XK27_03015 S permease
ALLCAPLI_01061 0.0 yhgF K Transcriptional accessory protein
ALLCAPLI_01062 2.2e-41 pspC KT PspC domain
ALLCAPLI_01063 1.9e-167 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ALLCAPLI_01064 2.9e-145 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ALLCAPLI_01065 3.4e-09 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
ALLCAPLI_01066 1.9e-66 ytxH S General stress protein
ALLCAPLI_01068 8.9e-178 yegQ O Peptidase U32
ALLCAPLI_01069 7.5e-252 yegQ O Peptidase U32
ALLCAPLI_01070 2.7e-86 bioY S biotin synthase
ALLCAPLI_01072 1.1e-33 XK27_12190 S protein conserved in bacteria
ALLCAPLI_01073 9.6e-234 mntH P H( )-stimulated, divalent metal cation uptake system
ALLCAPLI_01074 6.7e-13
ALLCAPLI_01075 4.1e-13
ALLCAPLI_01076 5.4e-286 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
ALLCAPLI_01077 1e-139 M LysM domain
ALLCAPLI_01078 8.4e-23
ALLCAPLI_01079 1.2e-174 S hydrolase
ALLCAPLI_01081 3.3e-115 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
ALLCAPLI_01082 3.9e-81 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ALLCAPLI_01083 9.4e-140 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
ALLCAPLI_01084 3e-26 P Hemerythrin HHE cation binding domain protein
ALLCAPLI_01085 2.8e-154 5.2.1.8 G hydrolase
ALLCAPLI_01086 5.2e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ALLCAPLI_01087 8.4e-202 MA20_36090 S Protein of unknown function (DUF2974)
ALLCAPLI_01088 1.9e-133 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
ALLCAPLI_01089 4.4e-45 S Phage derived protein Gp49-like (DUF891)
ALLCAPLI_01090 1.7e-45 K Helix-turn-helix domain
ALLCAPLI_01091 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
ALLCAPLI_01092 6.6e-95
ALLCAPLI_01093 1.4e-19
ALLCAPLI_01095 8.8e-133 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
ALLCAPLI_01096 0.0 S KAP family P-loop domain
ALLCAPLI_01097 3.5e-124 S Protein conserved in bacteria
ALLCAPLI_01098 1.1e-300 hsdM 2.1.1.72 V type I restriction-modification system
ALLCAPLI_01099 3.2e-132 S double-stranded DNA endodeoxyribonuclease activity
ALLCAPLI_01100 0.0 2.4.1.21 GT5 M Right handed beta helix region
ALLCAPLI_01101 5.1e-171 spd F DNA RNA non-specific endonuclease
ALLCAPLI_01102 1.1e-90 lemA S LemA family
ALLCAPLI_01103 1.3e-133 htpX O Belongs to the peptidase M48B family
ALLCAPLI_01104 3.5e-112 sirR K iron dependent repressor
ALLCAPLI_01105 9.5e-172 sitA P Belongs to the bacterial solute-binding protein 9 family
ALLCAPLI_01106 2.3e-132 mtsC P ABC-type Mn2 Zn2 transport systems, permease components
ALLCAPLI_01107 5.6e-127 sitB 3.6.3.35 P ABC transporter, ATP-binding protein
ALLCAPLI_01108 2.1e-74 S Psort location CytoplasmicMembrane, score
ALLCAPLI_01109 2.1e-64 S Domain of unknown function (DUF4430)
ALLCAPLI_01110 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
ALLCAPLI_01111 1.6e-183 holA 2.7.7.7 L DNA polymerase III delta subunit
ALLCAPLI_01112 4.7e-111 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
ALLCAPLI_01113 4.1e-163 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
ALLCAPLI_01114 5.2e-100 pilD 3.4.23.43 NOU Type II secretory pathway prepilin signal peptidase PulO and related peptidases
ALLCAPLI_01115 2.6e-78 dps P Belongs to the Dps family
ALLCAPLI_01116 1.7e-78 perR P Belongs to the Fur family
ALLCAPLI_01117 4.2e-27 yqgQ S protein conserved in bacteria
ALLCAPLI_01118 3.3e-175 glk 2.7.1.2 G Glucokinase
ALLCAPLI_01119 0.0 typA T GTP-binding protein TypA
ALLCAPLI_01121 5e-246 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ALLCAPLI_01122 8e-199 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ALLCAPLI_01123 9.7e-134 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
ALLCAPLI_01124 3.5e-223 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
ALLCAPLI_01125 4.3e-234 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ALLCAPLI_01126 2.8e-120 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ALLCAPLI_01127 1e-89 sepF D cell septum assembly
ALLCAPLI_01128 1.7e-30 yggT D integral membrane protein
ALLCAPLI_01129 2.9e-137 ylmH S conserved protein, contains S4-like domain
ALLCAPLI_01130 5.5e-137 divIVA D Cell division initiation protein
ALLCAPLI_01131 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ALLCAPLI_01132 8.5e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ALLCAPLI_01133 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ALLCAPLI_01134 6.5e-34 nrdH O Glutaredoxin
ALLCAPLI_01135 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ALLCAPLI_01136 1.2e-208 citZ 2.3.3.1 C Belongs to the citrate synthase family
ALLCAPLI_01137 9.1e-220 icd 1.1.1.42 C Isocitrate dehydrogenase
ALLCAPLI_01138 3e-38 ptsH G phosphocarrier protein Hpr
ALLCAPLI_01139 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ALLCAPLI_01140 6.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
ALLCAPLI_01141 3.9e-161 XK27_05670 S Putative esterase
ALLCAPLI_01142 2.7e-153 XK27_05675 S Esterase
ALLCAPLI_01143 5.4e-225 XK27_05680 6.3.2.2, 6.3.2.4 M carbamoylphosphate synthase large subunit
ALLCAPLI_01144 6e-178 yfmL 3.6.4.13 L DEAD DEAH box helicase
ALLCAPLI_01145 3.1e-113 udk 2.7.1.48 F Cytidine monophosphokinase
ALLCAPLI_01146 0.0 uup S abc transporter atp-binding protein
ALLCAPLI_01147 1.6e-39 MA20_06245 S yiaA/B two helix domain
ALLCAPLI_01148 4.6e-10
ALLCAPLI_01149 3.3e-132 pip 1.11.1.10 S Alpha beta hydrolase
ALLCAPLI_01150 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ALLCAPLI_01151 6.2e-148 cobQ S glutamine amidotransferase
ALLCAPLI_01152 1.1e-253 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
ALLCAPLI_01153 2.7e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
ALLCAPLI_01154 3.2e-162 ybbR S Protein conserved in bacteria
ALLCAPLI_01155 3.7e-249 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ALLCAPLI_01156 1.3e-64 gtrA S GtrA-like protein
ALLCAPLI_01157 3.7e-120 trmK 2.1.1.217 S SAM-dependent methyltransferase
ALLCAPLI_01158 1.3e-142 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ALLCAPLI_01159 1.1e-144 zupT P Mediates zinc uptake. May also transport other divalent cations
ALLCAPLI_01160 1.3e-193 yurR 1.4.5.1 E oxidoreductase
ALLCAPLI_01161 2.2e-254 S phospholipase Carboxylesterase
ALLCAPLI_01162 2.4e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ALLCAPLI_01163 6.4e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
ALLCAPLI_01164 1.3e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
ALLCAPLI_01166 1.7e-30 KT response to antibiotic
ALLCAPLI_01167 1.1e-214 hemN H Involved in the biosynthesis of porphyrin-containing compound
ALLCAPLI_01168 2e-140 fat 3.1.2.21 I Acyl-ACP thioesterase
ALLCAPLI_01169 6.7e-139 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
ALLCAPLI_01170 1.6e-117 ylfI S tigr01906
ALLCAPLI_01171 1.5e-135 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
ALLCAPLI_01172 1.4e-146 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
ALLCAPLI_01173 1e-58 XK27_08085
ALLCAPLI_01174 1.9e-192 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ALLCAPLI_01175 2.9e-179 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
ALLCAPLI_01176 5.5e-118 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
ALLCAPLI_01177 1.9e-234 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ALLCAPLI_01178 6.7e-107 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
ALLCAPLI_01179 5.2e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ALLCAPLI_01180 1e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ALLCAPLI_01181 1.6e-137 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
ALLCAPLI_01182 3e-59 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ALLCAPLI_01183 4.1e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
ALLCAPLI_01186 1.3e-93 XK27_05505 S Psort location CytoplasmicMembrane, score
ALLCAPLI_01187 5.4e-144 P molecular chaperone
ALLCAPLI_01188 2.8e-97 S Carbohydrate-binding domain-containing protein Cthe_2159
ALLCAPLI_01189 3e-179 XK27_08075 M glycosyl transferase family 2
ALLCAPLI_01190 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
ALLCAPLI_01191 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
ALLCAPLI_01192 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
ALLCAPLI_01193 1.4e-227 rodA D Belongs to the SEDS family
ALLCAPLI_01194 7.1e-245 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ALLCAPLI_01195 4.9e-111 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
ALLCAPLI_01196 4.6e-174 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
ALLCAPLI_01197 2.2e-134 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
ALLCAPLI_01198 7.5e-21 Q Methyltransferase domain
ALLCAPLI_01199 1.3e-64 GnaT 2.5.1.16 K acetyltransferase
ALLCAPLI_01200 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
ALLCAPLI_01201 4.9e-93 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ALLCAPLI_01202 9.3e-183 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ALLCAPLI_01203 3.8e-125 dnaD
ALLCAPLI_01204 4.2e-118 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ALLCAPLI_01206 3.9e-235 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
ALLCAPLI_01207 4.6e-29 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
ALLCAPLI_01208 2.4e-156 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
ALLCAPLI_01209 2.2e-148 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
ALLCAPLI_01210 2.8e-73 argR K Regulates arginine biosynthesis genes
ALLCAPLI_01211 5.6e-300 recN L May be involved in recombinational repair of damaged DNA
ALLCAPLI_01212 6.9e-145 DegV S DegV family
ALLCAPLI_01213 1.6e-157 ypmR E COG2755 Lysophospholipase L1 and related esterases
ALLCAPLI_01214 3.4e-95 ypmS S Protein conserved in bacteria
ALLCAPLI_01215 6.3e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
ALLCAPLI_01217 1.4e-178 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
ALLCAPLI_01218 3.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ALLCAPLI_01219 5.4e-53 hxlR K HxlR-like helix-turn-helix
ALLCAPLI_01220 2e-70 S SnoaL-like polyketide cyclase
ALLCAPLI_01221 2.1e-288 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ALLCAPLI_01222 2.3e-187 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
ALLCAPLI_01223 4.7e-276 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ALLCAPLI_01224 2.4e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ALLCAPLI_01231 5.8e-161 ppaC 3.6.1.1 C inorganic pyrophosphatase
ALLCAPLI_01232 9.2e-99 S Domain of unknown function (DUF1803)
ALLCAPLI_01233 7.8e-102 ygaC J Belongs to the UPF0374 family
ALLCAPLI_01234 9.2e-136 recX 2.4.1.337 GT4 S Regulatory protein RecX
ALLCAPLI_01235 2e-247 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ALLCAPLI_01236 5.2e-192 asnA 6.3.1.1 E aspartate--ammonia ligase
ALLCAPLI_01237 4.8e-257 lysC 2.7.2.4 E Belongs to the aspartokinase family
ALLCAPLI_01238 1.4e-113 S HAD hydrolase, family IA, variant 3
ALLCAPLI_01239 4.8e-140 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
ALLCAPLI_01240 5.2e-72 marR K Transcriptional regulator, MarR family
ALLCAPLI_01241 1.4e-170 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ALLCAPLI_01242 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
ALLCAPLI_01243 7.5e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
ALLCAPLI_01244 7.2e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
ALLCAPLI_01245 1.8e-125 IQ reductase
ALLCAPLI_01246 5.7e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
ALLCAPLI_01247 2.5e-54 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
ALLCAPLI_01248 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
ALLCAPLI_01249 1.8e-256 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
ALLCAPLI_01250 1e-159 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ALLCAPLI_01251 5.1e-139 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
ALLCAPLI_01252 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
ALLCAPLI_01253 1.2e-206 rny D Endoribonuclease that initiates mRNA decay
ALLCAPLI_01254 1.4e-112 fruR K transcriptional
ALLCAPLI_01255 7.6e-166 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
ALLCAPLI_01256 0.0 fruA 2.7.1.202 G phosphotransferase system
ALLCAPLI_01257 1.2e-255 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ALLCAPLI_01258 1.2e-225 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
ALLCAPLI_01260 3.1e-209 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
ALLCAPLI_01261 2.2e-224 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ALLCAPLI_01262 1.8e-289 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
ALLCAPLI_01263 1.6e-252 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
ALLCAPLI_01264 5.8e-81 2.3.1.128 K acetyltransferase
ALLCAPLI_01265 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
ALLCAPLI_01266 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
ALLCAPLI_01267 2.6e-129 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ALLCAPLI_01269 2.3e-14
ALLCAPLI_01270 5e-63 WQ51_03320 S cog cog4835
ALLCAPLI_01271 3.1e-145 XK27_08360 S EDD domain protein, DegV family
ALLCAPLI_01272 5.1e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
ALLCAPLI_01273 2.3e-218 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
ALLCAPLI_01274 0.0 yfmR S abc transporter atp-binding protein
ALLCAPLI_01275 1.7e-26 U response to pH
ALLCAPLI_01276 8.1e-129 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
ALLCAPLI_01277 8.8e-209 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
ALLCAPLI_01278 1.4e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
ALLCAPLI_01279 6.6e-269 S Psort location CytoplasmicMembrane, score
ALLCAPLI_01280 7.9e-70 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
ALLCAPLI_01281 2.8e-73 K DNA-binding transcription factor activity
ALLCAPLI_01282 7.2e-309 lmrA1 V abc transporter atp-binding protein
ALLCAPLI_01283 0.0 lmrA2 V abc transporter atp-binding protein
ALLCAPLI_01284 6.7e-113 K Acetyltransferase (GNAT) family
ALLCAPLI_01285 5.7e-112 2.7.6.5 S Region found in RelA / SpoT proteins
ALLCAPLI_01286 3.7e-117 T response regulator
ALLCAPLI_01287 7.7e-214 sptS 2.7.13.3 T Histidine kinase
ALLCAPLI_01288 1.7e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
ALLCAPLI_01289 6.4e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
ALLCAPLI_01290 8.5e-159 cvfB S Protein conserved in bacteria
ALLCAPLI_01291 8.2e-34 yozE S Belongs to the UPF0346 family
ALLCAPLI_01292 4.8e-126 sip M LysM domain protein
ALLCAPLI_01293 2e-186 phoH T phosphate starvation-inducible protein PhoH
ALLCAPLI_01299 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ALLCAPLI_01300 2e-160 S reductase
ALLCAPLI_01301 4.7e-168 K transcriptional regulator (lysR family)
ALLCAPLI_01302 4.7e-105 S CAAX amino terminal protease family protein
ALLCAPLI_01303 7.3e-259 2.7.13.3, 2.7.7.7, 5.4.99.21 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ALLCAPLI_01304 7.7e-177 coiA 3.6.4.12 S Competence protein
ALLCAPLI_01305 0.0 pepF E oligoendopeptidase F
ALLCAPLI_01306 6.5e-213 oxlT P COG0477 Permeases of the major facilitator superfamily
ALLCAPLI_01307 1.4e-119 yrrM 2.1.1.104 S O-Methyltransferase
ALLCAPLI_01308 3.6e-165 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
ALLCAPLI_01309 8.7e-84 yxjI S LURP-one-related
ALLCAPLI_01310 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ALLCAPLI_01311 0.0 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
ALLCAPLI_01312 3.1e-133 agrA KT phosphorelay signal transduction system
ALLCAPLI_01313 1e-227 2.7.13.3 T GHKL domain
ALLCAPLI_01315 0.0 vanY 3.4.17.14, 3.5.1.28 M D-alanyl-D-alanine carboxypeptidase
ALLCAPLI_01316 2.3e-139 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
ALLCAPLI_01317 7.4e-222 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
ALLCAPLI_01318 6.5e-182 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ALLCAPLI_01319 1.5e-217 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ALLCAPLI_01320 1.2e-124 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
ALLCAPLI_01321 3.7e-202 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
ALLCAPLI_01322 6.1e-136 yxkH G deacetylase
ALLCAPLI_01323 2.6e-236 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
ALLCAPLI_01324 4.5e-152 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
ALLCAPLI_01325 1.3e-149 rarD S Transporter
ALLCAPLI_01326 3.6e-18 T peptidase
ALLCAPLI_01327 3e-14 coiA 3.6.4.12 S Competence protein
ALLCAPLI_01328 1.4e-101 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ALLCAPLI_01329 3.8e-99 rimL 2.3.1.128, 5.2.1.8 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
ALLCAPLI_01330 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
ALLCAPLI_01331 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
ALLCAPLI_01332 2.4e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ALLCAPLI_01333 9e-122 atpB C it plays a direct role in the translocation of protons across the membrane
ALLCAPLI_01334 3.6e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ALLCAPLI_01335 1e-85 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ALLCAPLI_01336 1e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ALLCAPLI_01337 4.8e-157 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ALLCAPLI_01338 6.7e-262 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ALLCAPLI_01339 2.6e-68 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
ALLCAPLI_01340 7.8e-217 ftsW D Belongs to the SEDS family
ALLCAPLI_01341 1.6e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ALLCAPLI_01342 5.8e-135 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
ALLCAPLI_01343 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ALLCAPLI_01345 2.7e-109 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ALLCAPLI_01346 1.1e-158 holB 2.7.7.7 L dna polymerase iii
ALLCAPLI_01347 4.9e-132 yaaT S stage 0 sporulation protein
ALLCAPLI_01348 1.2e-54 yabA L Involved in initiation control of chromosome replication
ALLCAPLI_01349 7.3e-158 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ALLCAPLI_01350 3.5e-104 mur1 3.4.17.14, 3.5.1.28 NU amidase activity
ALLCAPLI_01351 1.2e-95 S HD domain
ALLCAPLI_01352 1.1e-139 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
ALLCAPLI_01353 5.4e-76 S Bacterial inner membrane protein
ALLCAPLI_01354 1e-113 3.4.17.14, 3.5.1.28 NU amidase activity
ALLCAPLI_01355 3.5e-294 nptA P COG1283 Na phosphate symporter
ALLCAPLI_01356 3.4e-219 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
ALLCAPLI_01357 6.6e-221 S membrane
ALLCAPLI_01358 3.7e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
ALLCAPLI_01359 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
ALLCAPLI_01360 5e-38 ynzC S UPF0291 protein
ALLCAPLI_01361 1.3e-254 cycA E permease
ALLCAPLI_01362 1.6e-08 uvrX 2.7.7.7 L impB/mucB/samB family
ALLCAPLI_01363 0.0 pts33BCA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
ALLCAPLI_01364 3e-139 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ALLCAPLI_01368 3.7e-157 V AAA domain, putative AbiEii toxin, Type IV TA system
ALLCAPLI_01369 1.4e-56 S ABC-2 type transporter
ALLCAPLI_01370 1.8e-96
ALLCAPLI_01372 9e-167 fhuR K transcriptional regulator (lysR family)
ALLCAPLI_01373 2.8e-76 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ALLCAPLI_01374 8.5e-162 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
ALLCAPLI_01375 1.8e-87 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
ALLCAPLI_01376 5.2e-221 pyrP F uracil Permease
ALLCAPLI_01377 1.3e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
ALLCAPLI_01378 4.6e-210 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
ALLCAPLI_01379 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
ALLCAPLI_01380 2.5e-122 rsmJ 2.1.1.242 J Putative SAM-dependent methyltransferase
ALLCAPLI_01381 2.3e-181 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ALLCAPLI_01382 1.2e-121 macB V ABC transporter, ATP-binding protein
ALLCAPLI_01383 1.4e-202 V permease protein
ALLCAPLI_01384 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ALLCAPLI_01385 2.1e-45 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
ALLCAPLI_01391 9.5e-130 D ftsk spoiiie
ALLCAPLI_01392 1.2e-223 repB P Belongs to the ABC transporter superfamily
ALLCAPLI_01393 1.2e-14 S Domain of unknown function (DUF3173)
ALLCAPLI_01394 1.7e-210 L DNA integration
ALLCAPLI_01396 1.3e-65 traG U COG3505 Type IV secretory pathway, VirD4 components
ALLCAPLI_01397 5e-105 XK27_00530 M CHAP domain protein
ALLCAPLI_01398 1.2e-106 abiGI K Transcriptional regulator, AbiEi antitoxin
ALLCAPLI_01399 7.1e-273 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
ALLCAPLI_01400 4.6e-29 K DNA-binding transcription factor activity
ALLCAPLI_01401 0.0 mdlB V abc transporter atp-binding protein
ALLCAPLI_01402 0.0 lmrA V abc transporter atp-binding protein
ALLCAPLI_01403 7.8e-199 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ALLCAPLI_01404 8.9e-122 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
ALLCAPLI_01405 6.9e-197 yceA S Belongs to the UPF0176 family
ALLCAPLI_01406 1.6e-28 XK27_00085 K Transcriptional
ALLCAPLI_01407 7.3e-22
ALLCAPLI_01408 7.7e-135 deoD_1 2.4.2.3 F Phosphorylase superfamily
ALLCAPLI_01409 8.7e-114 S VIT family
ALLCAPLI_01410 3.6e-126 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
ALLCAPLI_01411 4.2e-214 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
ALLCAPLI_01412 5.1e-196 ald 1.4.1.1 C Belongs to the AlaDH PNT family
ALLCAPLI_01414 2.8e-124 E alpha/beta hydrolase fold
ALLCAPLI_01415 2.5e-50 T peptidase
ALLCAPLI_01416 2.2e-109 T Response regulator receiver domain protein
ALLCAPLI_01417 1.6e-180 ybdK T ATPase histidine kinase DNA gyrase B HSP90 domain protein
ALLCAPLI_01418 2.2e-246 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ALLCAPLI_01419 2.2e-133 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
ALLCAPLI_01420 1.6e-163 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
ALLCAPLI_01421 9.2e-165 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
ALLCAPLI_01422 1.2e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
ALLCAPLI_01423 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
ALLCAPLI_01424 9.6e-245 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ALLCAPLI_01425 1.6e-94 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
ALLCAPLI_01426 9.2e-24
ALLCAPLI_01427 7.7e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ALLCAPLI_01428 0.0 U protein secretion
ALLCAPLI_01429 1.5e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
ALLCAPLI_01430 2.6e-247 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
ALLCAPLI_01431 1.2e-11
ALLCAPLI_01432 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ALLCAPLI_01433 9.3e-151 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
ALLCAPLI_01434 2.1e-191 S Protein of unknown function (DUF3114)
ALLCAPLI_01435 4.1e-29 pspC KT PspC domain protein
ALLCAPLI_01436 2.2e-117 yqfA K protein, Hemolysin III
ALLCAPLI_01437 9.5e-77 K hmm pf08876
ALLCAPLI_01438 6.6e-224 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
ALLCAPLI_01439 1.4e-209 mvaS 2.3.3.10 I synthase
ALLCAPLI_01440 4.2e-166 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ALLCAPLI_01441 1.9e-89 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ALLCAPLI_01442 9.7e-22
ALLCAPLI_01443 2.6e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ALLCAPLI_01444 3.9e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
ALLCAPLI_01445 5.8e-250 mmuP E amino acid
ALLCAPLI_01446 3.1e-170 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
ALLCAPLI_01447 2.2e-30 S Domain of unknown function (DUF1912)
ALLCAPLI_01448 4e-12 L Helix-hairpin-helix DNA-binding motif class 1
ALLCAPLI_01449 6.2e-106 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
ALLCAPLI_01450 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
ALLCAPLI_01452 4.9e-08
ALLCAPLI_01453 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
ALLCAPLI_01454 4.5e-199 ilvE 2.6.1.42 E Aminotransferase
ALLCAPLI_01455 4.8e-16 S Protein of unknown function (DUF2969)
ALLCAPLI_01458 2.5e-204 rpsA 1.17.7.4 J ribosomal protein S1
ALLCAPLI_01459 2.4e-225 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
ALLCAPLI_01460 3.4e-14 rpmH J Ribosomal protein L34
ALLCAPLI_01461 6.5e-99 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
ALLCAPLI_01462 1.7e-97 K Transcriptional regulator
ALLCAPLI_01463 1.3e-169 jag S RNA-binding protein
ALLCAPLI_01464 5.4e-139 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
ALLCAPLI_01465 1.3e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
ALLCAPLI_01466 7.8e-263 argH 4.3.2.1 E Argininosuccinate lyase
ALLCAPLI_01467 1.7e-229 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
ALLCAPLI_01468 1e-128 fasA KT Response regulator of the LytR AlgR family
ALLCAPLI_01469 3.6e-225 fasC T protein histidine kinase activity
ALLCAPLI_01470 3e-208 hpk9 2.7.13.3 T protein histidine kinase activity
ALLCAPLI_01471 4.7e-152 hpk9 2.7.13.3 T protein histidine kinase activity
ALLCAPLI_01472 9.1e-229 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
ALLCAPLI_01473 1.6e-271 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ALLCAPLI_01474 0.0 amiA E ABC transporter, substrate-binding protein, family 5
ALLCAPLI_01475 5.3e-119 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
ALLCAPLI_01476 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ALLCAPLI_01477 1.6e-50 S Protein of unknown function (DUF3397)
ALLCAPLI_01478 1e-87 cah 4.2.1.1 P Reversible hydration of carbon dioxide
ALLCAPLI_01479 1.6e-126 WQ51_05710 S Mitochondrial biogenesis AIM24
ALLCAPLI_01480 2e-225 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ALLCAPLI_01481 6.9e-75 3.5.1.19 Q hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
ALLCAPLI_01482 3.2e-77 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
ALLCAPLI_01483 6.3e-108 XK27_09620 S FMN reductase (NADPH) activity
ALLCAPLI_01484 7.9e-230 XK27_09615 C reductase
ALLCAPLI_01485 1.3e-140 fnt P Formate nitrite transporter
ALLCAPLI_01486 1.9e-95 XK27_08585 S Psort location CytoplasmicMembrane, score
ALLCAPLI_01487 3.5e-183 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
ALLCAPLI_01488 1.6e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
ALLCAPLI_01489 7e-116 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
ALLCAPLI_01490 3.5e-94 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ALLCAPLI_01491 7.4e-219 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
ALLCAPLI_01492 1.5e-57 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
ALLCAPLI_01493 1.6e-129 S HAD hydrolase, family IA, variant
ALLCAPLI_01494 9.5e-155 rrmA 2.1.1.187 Q methyltransferase
ALLCAPLI_01498 7.3e-89 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
ALLCAPLI_01499 6.6e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
ALLCAPLI_01500 8.3e-37 yeeD O sulfur carrier activity
ALLCAPLI_01501 4.3e-189 yeeE S Sulphur transport
ALLCAPLI_01502 5.1e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
ALLCAPLI_01503 7.6e-09 S NTF2 fold immunity protein
ALLCAPLI_01504 9.4e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
ALLCAPLI_01505 2.7e-08 XK27_10305 S Domain of unknown function (DUF4651)
ALLCAPLI_01506 4.8e-204 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
ALLCAPLI_01507 5.2e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ALLCAPLI_01508 4e-100 S CAAX amino terminal protease family protein
ALLCAPLI_01510 7.3e-110 V CAAX protease self-immunity
ALLCAPLI_01511 8.8e-27 lanR K sequence-specific DNA binding
ALLCAPLI_01512 4.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ALLCAPLI_01513 1.5e-175 ytxK 2.1.1.72 L DNA methylase
ALLCAPLI_01514 8.9e-13 comGF U Putative Competence protein ComGF
ALLCAPLI_01515 1.3e-70 comGF U Competence protein ComGF
ALLCAPLI_01516 1.1e-15 NU Type II secretory pathway pseudopilin
ALLCAPLI_01517 6e-68 cglD NU Competence protein
ALLCAPLI_01518 2.2e-43 comGC U Required for transformation and DNA binding
ALLCAPLI_01519 1.7e-143 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ALLCAPLI_01520 4.2e-175 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ALLCAPLI_01521 1e-68 S cog cog4699
ALLCAPLI_01522 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ALLCAPLI_01523 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ALLCAPLI_01524 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
ALLCAPLI_01525 5.5e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ALLCAPLI_01526 1.3e-193 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ALLCAPLI_01527 5e-76 ilvN 2.2.1.6 E Acetolactate synthase
ALLCAPLI_01528 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
ALLCAPLI_01529 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
ALLCAPLI_01530 6e-302 yloV S kinase related to dihydroxyacetone kinase
ALLCAPLI_01531 1.4e-57 asp S cog cog1302
ALLCAPLI_01532 4.3e-223 norN V Mate efflux family protein
ALLCAPLI_01533 1.6e-274 thrC 4.2.3.1 E Threonine synthase
ALLCAPLI_01536 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
ALLCAPLI_01537 0.0 pepO 3.4.24.71 O Peptidase family M13
ALLCAPLI_01538 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
ALLCAPLI_01539 7.2e-289 treB 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
ALLCAPLI_01540 4e-60 treB 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
ALLCAPLI_01541 7.9e-126 treR K trehalose operon
ALLCAPLI_01542 5.1e-96 ywlG S Belongs to the UPF0340 family
ALLCAPLI_01544 1.3e-165 fba 4.1.2.13, 4.1.2.29 G aldolase
ALLCAPLI_01546 1.1e-245 6.3.2.2 H gamma-glutamylcysteine synthetase
ALLCAPLI_01547 4.4e-62 rplQ J ribosomal protein l17
ALLCAPLI_01548 3.6e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ALLCAPLI_01549 1.9e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ALLCAPLI_01550 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ALLCAPLI_01551 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
ALLCAPLI_01552 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ALLCAPLI_01553 2.1e-114 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
ALLCAPLI_01554 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
ALLCAPLI_01555 1.7e-57 rplO J binds to the 23S rRNA
ALLCAPLI_01556 1.9e-23 rpmD J ribosomal protein l30
ALLCAPLI_01557 1.3e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ALLCAPLI_01558 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ALLCAPLI_01559 6.6e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ALLCAPLI_01560 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ALLCAPLI_01561 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ALLCAPLI_01562 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ALLCAPLI_01563 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ALLCAPLI_01564 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ALLCAPLI_01565 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ALLCAPLI_01566 3.5e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
ALLCAPLI_01567 1.1e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
ALLCAPLI_01568 1.6e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ALLCAPLI_01569 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ALLCAPLI_01570 8.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ALLCAPLI_01571 6.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ALLCAPLI_01572 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
ALLCAPLI_01573 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
ALLCAPLI_01574 2.4e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ALLCAPLI_01575 2.9e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
ALLCAPLI_01576 1e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
ALLCAPLI_01577 0.0 XK27_09800 I Acyltransferase
ALLCAPLI_01578 2.8e-35 XK27_09805 S MORN repeat protein
ALLCAPLI_01579 1.4e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ALLCAPLI_01580 7.8e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ALLCAPLI_01581 1.9e-89 adk 2.7.4.3 F topology modulation protein
ALLCAPLI_01583 7.5e-236 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
ALLCAPLI_01584 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
ALLCAPLI_01585 6.3e-44 yrzL S Belongs to the UPF0297 family
ALLCAPLI_01586 1.8e-69 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ALLCAPLI_01587 3.2e-44 yrzB S Belongs to the UPF0473 family
ALLCAPLI_01588 5.8e-289 ccs S the current gene model (or a revised gene model) may contain a frame shift
ALLCAPLI_01589 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
ALLCAPLI_01590 7.5e-14
ALLCAPLI_01591 3.3e-86 XK27_10930 K acetyltransferase
ALLCAPLI_01592 7.7e-114 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ALLCAPLI_01593 1e-120 yaaA S Belongs to the UPF0246 family
ALLCAPLI_01594 9.3e-167 XK27_01785 S cog cog1284
ALLCAPLI_01595 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
ALLCAPLI_01597 1.5e-236 hisS 6.1.1.21 J histidyl-tRNA synthetase
ALLCAPLI_01598 3.8e-87 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
ALLCAPLI_01599 5.2e-51 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
ALLCAPLI_01600 1e-11 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
ALLCAPLI_01601 6.8e-217 metE 2.1.1.14 E Methionine synthase
ALLCAPLI_01602 3.4e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
ALLCAPLI_01603 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
ALLCAPLI_01607 1.6e-114 nudL L hydrolase
ALLCAPLI_01608 1.7e-51 K transcriptional regulator, PadR family
ALLCAPLI_01609 2.2e-57 XK27_06920 S Protein of unknown function (DUF1700)
ALLCAPLI_01610 3.7e-106 S Putative adhesin
ALLCAPLI_01611 1.8e-158 XK27_06930 V domain protein
ALLCAPLI_01612 2.1e-94 XK27_06935 K transcriptional regulator
ALLCAPLI_01613 2.2e-52 ypaA M Membrane
ALLCAPLI_01614 1.1e-10
ALLCAPLI_01615 5.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ALLCAPLI_01616 1.8e-47 veg S Biofilm formation stimulator VEG
ALLCAPLI_01617 4.2e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
ALLCAPLI_01618 2.2e-73 rplI J binds to the 23S rRNA
ALLCAPLI_01619 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
ALLCAPLI_01620 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
ALLCAPLI_01621 2.5e-96 yvbG U UPF0056 membrane protein
ALLCAPLI_01622 7.3e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
ALLCAPLI_01623 4.6e-305 S Bacterial membrane protein, YfhO
ALLCAPLI_01624 1.3e-64 isaA GH23 M Immunodominant staphylococcal antigen A
ALLCAPLI_01625 7.1e-61 lytE M LysM domain protein
ALLCAPLI_01626 2.2e-132 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ALLCAPLI_01627 8.4e-151 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ALLCAPLI_01628 2.7e-149 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ALLCAPLI_01629 5.9e-89 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ALLCAPLI_01630 9.6e-126 S sequence-specific DNA binding
ALLCAPLI_01631 4.6e-233 ymfH S Peptidase M16
ALLCAPLI_01632 1.1e-228 ymfF S Peptidase M16
ALLCAPLI_01633 6.4e-58 yaaA S S4 domain protein YaaA
ALLCAPLI_01634 1.4e-198 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ALLCAPLI_01635 1.1e-273 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
ALLCAPLI_01636 2.5e-189 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
ALLCAPLI_01637 1.6e-152 yvjA S membrane
ALLCAPLI_01638 1.1e-305 ybiT S abc transporter atp-binding protein
ALLCAPLI_01639 0.0 XK27_10405 S Bacterial membrane protein YfhO
ALLCAPLI_01643 2.2e-117 yoaK S Protein of unknown function (DUF1275)
ALLCAPLI_01644 6.8e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ALLCAPLI_01645 1.5e-201 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
ALLCAPLI_01646 1.6e-132 parB K Belongs to the ParB family
ALLCAPLI_01647 2.2e-254 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ALLCAPLI_01648 2.1e-197 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
ALLCAPLI_01649 3.2e-29 yyzM S Protein conserved in bacteria
ALLCAPLI_01650 1.1e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
ALLCAPLI_01651 4.4e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
ALLCAPLI_01652 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ALLCAPLI_01653 2.2e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
ALLCAPLI_01654 1.5e-59 divIC D Septum formation initiator
ALLCAPLI_01656 2.3e-232 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
ALLCAPLI_01657 4e-229 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
ALLCAPLI_01658 2.2e-96 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
ALLCAPLI_01659 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ALLCAPLI_01660 2.1e-99 ybhL S Belongs to the BI1 family
ALLCAPLI_01661 7.3e-94 XK27_09705 6.1.1.14 S HD superfamily hydrolase
ALLCAPLI_01662 2.3e-128 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ALLCAPLI_01663 1.1e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
ALLCAPLI_01664 1.4e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
ALLCAPLI_01665 1.2e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
ALLCAPLI_01666 2.2e-287 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ALLCAPLI_01667 2.7e-85 XK27_09675 K histone acetyltransferase HPA2 and related acetyltransferases
ALLCAPLI_01668 3.4e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
ALLCAPLI_01669 4.8e-22
ALLCAPLI_01670 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
ALLCAPLI_01671 3.3e-278 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
ALLCAPLI_01672 2.1e-221 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
ALLCAPLI_01673 9.6e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
ALLCAPLI_01674 5.8e-94 ypsA S Belongs to the UPF0398 family
ALLCAPLI_01675 4.3e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
ALLCAPLI_01676 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
ALLCAPLI_01677 5.4e-253 pepC 3.4.22.40 E aminopeptidase
ALLCAPLI_01678 1.4e-72 yhaI S Protein of unknown function (DUF805)
ALLCAPLI_01679 8.4e-148 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
ALLCAPLI_01680 2.2e-271 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ALLCAPLI_01681 3.3e-204 macB_2 V FtsX-like permease family
ALLCAPLI_01682 8.1e-120 yhcA V abc transporter atp-binding protein
ALLCAPLI_01683 5.5e-119 mta K Transcriptional
ALLCAPLI_01684 2.2e-30 S Protein of unknown function (DUF3021)
ALLCAPLI_01685 9e-75 K COG3279 Response regulator of the LytR AlgR family
ALLCAPLI_01686 1.2e-133 cylB V ABC-2 type transporter
ALLCAPLI_01687 1.7e-146 cylA V abc transporter atp-binding protein
ALLCAPLI_01688 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
ALLCAPLI_01689 1.1e-133 glcR K transcriptional regulator (DeoR family)
ALLCAPLI_01690 2.1e-143 cof S Sucrose-6F-phosphate phosphohydrolase
ALLCAPLI_01691 2.3e-67 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
ALLCAPLI_01692 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
ALLCAPLI_01693 2.8e-24 secE U Belongs to the SecE SEC61-gamma family
ALLCAPLI_01694 1.4e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
ALLCAPLI_01695 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
ALLCAPLI_01696 2.4e-161 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
ALLCAPLI_01697 7.6e-55 S TM2 domain
ALLCAPLI_01698 1.5e-44
ALLCAPLI_01700 3.4e-286 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
ALLCAPLI_01701 5.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ALLCAPLI_01702 3e-142 cmpC S abc transporter atp-binding protein
ALLCAPLI_01703 0.0 WQ51_06230 S ABC transporter substrate binding protein
ALLCAPLI_01704 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
ALLCAPLI_01705 1.8e-229 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
ALLCAPLI_01706 4.6e-143 cdsA 2.7.7.41 S Belongs to the CDS family
ALLCAPLI_01707 1.6e-140 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ALLCAPLI_01708 1.7e-46 yajC U protein transport
ALLCAPLI_01709 4.6e-126 yeeN K transcriptional regulatory protein
ALLCAPLI_01710 4.8e-257 pgi 5.3.1.9 G Belongs to the GPI family
ALLCAPLI_01711 1.4e-158 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
ALLCAPLI_01712 0.0 ptsG 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
ALLCAPLI_01713 7.9e-158 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
ALLCAPLI_01714 7.4e-128 adcB P ABC transporter (Permease
ALLCAPLI_01715 2.1e-134 adcC 3.6.3.35 P ABC transporter, ATP-binding protein
ALLCAPLI_01716 1.3e-70 adcR K transcriptional
ALLCAPLI_01717 1.1e-181 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ALLCAPLI_01718 1.6e-157 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ALLCAPLI_01719 5.5e-27
ALLCAPLI_01720 2.9e-273 sufB O assembly protein SufB
ALLCAPLI_01721 9.4e-74 nifU C SUF system FeS assembly protein, NifU family
ALLCAPLI_01722 8.8e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ALLCAPLI_01723 3.4e-233 sufD O assembly protein SufD
ALLCAPLI_01724 1.7e-137 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
ALLCAPLI_01725 5.7e-182 tagO 2.7.8.33, 2.7.8.35 M transferase
ALLCAPLI_01726 3.5e-124 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
ALLCAPLI_01727 4.1e-17 S Protein of unknown function (DUF3021)
ALLCAPLI_01728 1.5e-152 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
ALLCAPLI_01729 4.2e-273 glnP P ABC transporter
ALLCAPLI_01730 2.2e-123 glnQ E abc transporter atp-binding protein
ALLCAPLI_01731 6e-184 D nuclear chromosome segregation
ALLCAPLI_01732 1.7e-81 V VanZ like family
ALLCAPLI_01733 5.4e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ALLCAPLI_01734 1.5e-182 yhjX P Major Facilitator
ALLCAPLI_01735 4.7e-74 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
ALLCAPLI_01736 1.9e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
ALLCAPLI_01737 7.3e-236 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ALLCAPLI_01738 0.0 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
ALLCAPLI_01739 8.2e-73 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
ALLCAPLI_01740 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ALLCAPLI_01741 9.1e-83 nrdI F Belongs to the NrdI family
ALLCAPLI_01742 0.0 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
ALLCAPLI_01743 1.1e-130 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
ALLCAPLI_01744 2.5e-175 prmA J Ribosomal protein L11 methyltransferase
ALLCAPLI_01745 8e-76 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
ALLCAPLI_01746 8.4e-84 XK27_03960 S Protein of unknown function (DUF3013)
ALLCAPLI_01747 1.4e-308 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
ALLCAPLI_01748 1.3e-70 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
ALLCAPLI_01749 5.8e-228 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
ALLCAPLI_01750 2.3e-134 ykuT M mechanosensitive ion channel
ALLCAPLI_01751 3.9e-87 sigH K DNA-templated transcription, initiation
ALLCAPLI_01753 4.2e-12 ycdA S Domain of unknown function (DUF4352)
ALLCAPLI_01754 3.1e-242 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
ALLCAPLI_01755 4.5e-89 K transcriptional regulator
ALLCAPLI_01756 1.6e-36 yneF S UPF0154 protein
ALLCAPLI_01757 3.4e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
ALLCAPLI_01758 5.6e-183 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ALLCAPLI_01759 1.3e-96 XK27_09740 S Phosphoesterase
ALLCAPLI_01760 8.3e-87 ykuL S CBS domain
ALLCAPLI_01761 1.6e-132 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
ALLCAPLI_01762 9e-122 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ALLCAPLI_01763 3.4e-95 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ALLCAPLI_01764 3.4e-132 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
ALLCAPLI_01765 4.4e-39 yidD S Could be involved in insertion of integral membrane proteins into the membrane
ALLCAPLI_01766 1e-257 trkH P Cation transport protein
ALLCAPLI_01767 9.3e-245 trkA P Potassium transporter peripheral membrane component
ALLCAPLI_01768 5.1e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
ALLCAPLI_01769 3e-88 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
ALLCAPLI_01770 4.9e-90 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
ALLCAPLI_01771 1.2e-155 K sequence-specific DNA binding
ALLCAPLI_01772 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
ALLCAPLI_01773 3.2e-53 yhaI L Membrane
ALLCAPLI_01774 1.2e-250 S Domain of unknown function (DUF4173)
ALLCAPLI_01775 6.8e-95 ureI S AmiS/UreI family transporter
ALLCAPLI_01776 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
ALLCAPLI_01777 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
ALLCAPLI_01778 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
ALLCAPLI_01779 6.6e-78 ureE O enzyme active site formation
ALLCAPLI_01780 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
ALLCAPLI_01781 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ALLCAPLI_01782 3.1e-161 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
ALLCAPLI_01783 2.1e-177 cbiM P PDGLE domain
ALLCAPLI_01784 7.5e-138 P cobalt transport protein
ALLCAPLI_01785 6.3e-131 cbiO P ABC transporter
ALLCAPLI_01786 6.3e-138 ET ABC transporter substrate-binding protein
ALLCAPLI_01787 1.4e-164 metQ M Belongs to the NlpA lipoprotein family
ALLCAPLI_01788 4.5e-263 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
ALLCAPLI_01789 3.3e-184 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ALLCAPLI_01790 1.2e-99 metI P ABC transporter (Permease
ALLCAPLI_01791 3.3e-209 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ALLCAPLI_01792 1.6e-157 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
ALLCAPLI_01793 6.7e-93 S UPF0397 protein
ALLCAPLI_01794 1.8e-309 ykoD P abc transporter atp-binding protein
ALLCAPLI_01795 7.2e-147 cbiQ P cobalt transport
ALLCAPLI_01796 1.8e-116 ktrA P COG0569 K transport systems, NAD-binding component
ALLCAPLI_01797 1.9e-237 P COG0168 Trk-type K transport systems, membrane components
ALLCAPLI_01798 5.5e-127 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
ALLCAPLI_01799 1.5e-89 yceD K metal-binding, possibly nucleic acid-binding protein
ALLCAPLI_01800 7.9e-123 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
ALLCAPLI_01801 2.5e-278 T PhoQ Sensor
ALLCAPLI_01802 3e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ALLCAPLI_01803 1.2e-211 dnaB L Replication initiation and membrane attachment
ALLCAPLI_01804 1.3e-165 dnaI L Primosomal protein DnaI
ALLCAPLI_01805 9.7e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
ALLCAPLI_01806 2.9e-108
ALLCAPLI_01807 4e-229 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ALLCAPLI_01808 5.5e-62 manO S protein conserved in bacteria
ALLCAPLI_01809 1.6e-168 manN G PTS system mannose fructose sorbose family IID component
ALLCAPLI_01810 1.2e-117 manM G pts system
ALLCAPLI_01811 4e-176 manL 2.7.1.191 G pts system
ALLCAPLI_01812 2.6e-67 manO S Protein conserved in bacteria
ALLCAPLI_01813 3.6e-163 manN G PTS system mannose fructose sorbose family IID component
ALLCAPLI_01814 4.7e-135 manY G pts system
ALLCAPLI_01815 8.1e-169 manL 2.7.1.191 G pts system
ALLCAPLI_01816 1.3e-139 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
ALLCAPLI_01817 1.5e-152 yitU 3.1.3.104 S hydrolases of the HAD superfamily
ALLCAPLI_01818 1.6e-247 pbuO S permease
ALLCAPLI_01819 1.2e-76 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
ALLCAPLI_01820 2.4e-87 XK27_05885 2.3.1.82 M phosphinothricin N-acetyltransferase activity
ALLCAPLI_01821 3.5e-185 brpA K Transcriptional
ALLCAPLI_01822 5.1e-81 rimP S Required for maturation of 30S ribosomal subunits
ALLCAPLI_01823 3.5e-195 nusA K Participates in both transcription termination and antitermination
ALLCAPLI_01824 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
ALLCAPLI_01825 8e-42 ylxQ J ribosomal protein
ALLCAPLI_01826 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ALLCAPLI_01827 8.6e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ALLCAPLI_01828 3.2e-98 yvdD 3.2.2.10 S Belongs to the LOG family
ALLCAPLI_01829 1.9e-191 femA 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
ALLCAPLI_01830 6.2e-271 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ALLCAPLI_01831 3.5e-286 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
ALLCAPLI_01832 0.0 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
ALLCAPLI_01833 3e-201 metB 2.5.1.48, 4.4.1.8 E cystathionine
ALLCAPLI_01834 4e-220 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
ALLCAPLI_01835 2.8e-302 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
ALLCAPLI_01836 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
ALLCAPLI_01837 5.7e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ALLCAPLI_01838 3.7e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
ALLCAPLI_01839 3.2e-72 ylbF S Belongs to the UPF0342 family
ALLCAPLI_01840 7.1e-46 ylbG S UPF0298 protein
ALLCAPLI_01841 2.6e-211 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
ALLCAPLI_01842 1.2e-144 livH E Belongs to the binding-protein-dependent transport system permease family
ALLCAPLI_01843 4.9e-139 livM E Belongs to the binding-protein-dependent transport system permease family
ALLCAPLI_01844 1.1e-136 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
ALLCAPLI_01845 5.6e-124 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
ALLCAPLI_01846 2.5e-110 acuB S CBS domain
ALLCAPLI_01847 7e-167 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
ALLCAPLI_01848 2.2e-108 yvyE 3.4.13.9 S YigZ family
ALLCAPLI_01849 3.1e-237 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
ALLCAPLI_01850 7.2e-88 comFC K competence protein
ALLCAPLI_01851 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ALLCAPLI_01852 1.1e-78 hmpT S cog cog4720
ALLCAPLI_01853 2.6e-135 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
ALLCAPLI_01854 6.5e-139 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
ALLCAPLI_01855 8e-189 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
ALLCAPLI_01856 1.1e-105 thiJ-2 3.5.1.124 S DJ-1/PfpI family
ALLCAPLI_01857 6e-303 dnaK O Heat shock 70 kDa protein
ALLCAPLI_01858 9.1e-63 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ALLCAPLI_01859 1.9e-184 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
ALLCAPLI_01860 4e-99 acmA 3.2.1.17, 3.4.17.14, 3.5.1.28 NU Muramidase (Flagellum-specific)
ALLCAPLI_01861 5.3e-139 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
ALLCAPLI_01862 1.2e-131 ais G Phosphoglycerate mutase
ALLCAPLI_01863 4e-240 XK27_08635 S UPF0210 protein
ALLCAPLI_01864 2.3e-38 gcvR T UPF0237 protein
ALLCAPLI_01865 9.7e-233 capA M Bacterial capsule synthesis protein
ALLCAPLI_01866 8.6e-148 srtB 3.4.22.70 S Sortase family
ALLCAPLI_01868 1.5e-29 K Helix-turn-helix domain
ALLCAPLI_01869 2.9e-17
ALLCAPLI_01870 3.4e-15 S Protein of unknown function (DUF1211)
ALLCAPLI_01871 4.5e-51 frnE Q DSBA-like thioredoxin domain
ALLCAPLI_01873 3.7e-160 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
ALLCAPLI_01874 5.5e-47 trxA O Belongs to the thioredoxin family
ALLCAPLI_01875 2.2e-98 M1-798 K Rhodanese Homology Domain
ALLCAPLI_01876 4.7e-168 lacX G Aldose 1-epimerase
ALLCAPLI_01877 4.6e-287 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
ALLCAPLI_01878 0.0 lacE 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIB subunit
ALLCAPLI_01879 3.5e-49 lacF 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
ALLCAPLI_01880 1e-179 lacD 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
ALLCAPLI_01881 1.3e-93 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
ALLCAPLI_01882 6.7e-72 lacA 5.3.1.26 G Ribose/Galactose Isomerase
ALLCAPLI_01883 7.4e-122 lacR K DeoR C terminal sensor domain
ALLCAPLI_01884 2.3e-80 S Haloacid dehalogenase-like hydrolase
ALLCAPLI_01885 2.5e-95 K Replication initiation factor
ALLCAPLI_01886 2.6e-29 isp2 S pathogenesis
ALLCAPLI_01887 2.7e-10
ALLCAPLI_01888 7.8e-176 S Septin
ALLCAPLI_01889 3.5e-14 S Helix-turn-helix domain
ALLCAPLI_01890 3.8e-60 int L Belongs to the 'phage' integrase family
ALLCAPLI_01891 1.2e-56 int L Phage integrase family
ALLCAPLI_01892 1.4e-50 yiiE S protein homotetramerization
ALLCAPLI_01893 1.6e-16
ALLCAPLI_01894 4.5e-55 cadX K transcriptional regulator, ArsR family
ALLCAPLI_01895 2e-101 cadD P Cadmium resistance transporter
ALLCAPLI_01897 0.0 3.6.3.4 P P-type ATPase
ALLCAPLI_01898 3.2e-80 copY K Copper transport repressor, CopY TcrY family
ALLCAPLI_01899 1.2e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
ALLCAPLI_01900 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ALLCAPLI_01901 5.1e-22 K Transcriptional
ALLCAPLI_01903 3.5e-152 degV S DegV family
ALLCAPLI_01904 1.3e-90 yacP S RNA-binding protein containing a PIN domain
ALLCAPLI_01905 9.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ALLCAPLI_01907 2.7e-67 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
ALLCAPLI_01908 9e-256 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
ALLCAPLI_01909 2.5e-112 cysE 2.3.1.30 E serine acetyltransferase
ALLCAPLI_01910 1.9e-141 S SseB protein N-terminal domain
ALLCAPLI_01911 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
ALLCAPLI_01912 3.8e-224 dacA 3.4.16.4 M Belongs to the peptidase S11 family
ALLCAPLI_01913 5.1e-229 dacA 3.4.16.4 M Belongs to the peptidase S11 family
ALLCAPLI_01914 0.0 clpC O Belongs to the ClpA ClpB family
ALLCAPLI_01915 2e-74 ctsR K Belongs to the CtsR family
ALLCAPLI_01916 1.6e-82 S Putative small multi-drug export protein
ALLCAPLI_01917 1e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ALLCAPLI_01918 7.4e-138 rpsB J Belongs to the universal ribosomal protein uS2 family
ALLCAPLI_01919 1.9e-106 ahpC 1.11.1.15 O alkyl hydroperoxide reductase
ALLCAPLI_01920 2.6e-283 ahpF O alkyl hydroperoxide reductase
ALLCAPLI_01922 1.6e-94 S reductase
ALLCAPLI_01923 1.3e-70 badR K Transcriptional regulator, marr family
ALLCAPLI_01924 1.2e-35 XK27_02060 S Transglycosylase associated protein
ALLCAPLI_01925 5.1e-237 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
ALLCAPLI_01926 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ALLCAPLI_01931 1.9e-07
ALLCAPLI_01933 9.9e-130 V Psort location CytoplasmicMembrane, score
ALLCAPLI_01934 5.4e-119 skfE V abc transporter atp-binding protein
ALLCAPLI_01935 1.9e-62 yvoA_1 K Transcriptional
ALLCAPLI_01936 1.4e-147 supH S overlaps another CDS with the same product name
ALLCAPLI_01937 5.3e-142 XK27_02985 S overlaps another CDS with the same product name
ALLCAPLI_01938 2.7e-194 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
ALLCAPLI_01939 8.8e-113 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
ALLCAPLI_01940 3.6e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
ALLCAPLI_01941 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ALLCAPLI_01942 4.4e-169 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ALLCAPLI_01943 1e-243 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ALLCAPLI_01944 2.6e-135 stp 3.1.3.16 T phosphatase
ALLCAPLI_01945 2.6e-293 prkC 2.7.11.1 KLT serine threonine protein kinase
ALLCAPLI_01946 2.1e-100 kcsA P Ion transport protein
ALLCAPLI_01947 5.6e-116 yvqF S Membrane
ALLCAPLI_01948 9.7e-170 vraS 2.7.13.3 T Histidine kinase
ALLCAPLI_01949 3.1e-113 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
ALLCAPLI_01952 1.1e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ALLCAPLI_01953 1.6e-134 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
ALLCAPLI_01954 3.3e-186 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
ALLCAPLI_01955 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
ALLCAPLI_01956 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
ALLCAPLI_01957 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ALLCAPLI_01958 3.2e-185 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
ALLCAPLI_01959 2.3e-180 glgD 2.4.1.21, 2.7.7.27 GT5 G glucose-1-phosphate adenylyltransferase
ALLCAPLI_01960 2.7e-282 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
ALLCAPLI_01961 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
ALLCAPLI_01962 6.5e-99 2.3.1.128 K Acetyltransferase GNAT Family
ALLCAPLI_01963 1.6e-285 S Protein of unknown function (DUF3114)
ALLCAPLI_01965 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
ALLCAPLI_01966 4e-296 V abc transporter atp-binding protein
ALLCAPLI_01967 0.0 V abc transporter atp-binding protein
ALLCAPLI_01968 5.9e-187 XK27_10075 S abc transporter atp-binding protein
ALLCAPLI_01969 8.9e-12
ALLCAPLI_01971 0.0 M domain protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)