ORF_ID e_value Gene_name EC_number CAZy COGs Description
PMPDDMJF_00001 9.5e-22 tnp2PF3 L Transposase DDE domain
PMPDDMJF_00002 2.9e-112 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PMPDDMJF_00003 6.7e-20 S Bacteriophage abortive infection AbiH
PMPDDMJF_00004 2.4e-106 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PMPDDMJF_00005 7.1e-59 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PMPDDMJF_00006 2.4e-106 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PMPDDMJF_00007 3.2e-71 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PMPDDMJF_00012 5.4e-22
PMPDDMJF_00017 6.9e-14
PMPDDMJF_00018 9.8e-37 S DNA N-6-adenine-methyltransferase (Dam)
PMPDDMJF_00019 3e-65 S magnesium ion binding
PMPDDMJF_00020 1.6e-36
PMPDDMJF_00022 3.5e-127 dnaC 3.4.21.53 L IstB-like ATP binding protein
PMPDDMJF_00023 3.1e-52 L Domain of unknown function (DUF4373)
PMPDDMJF_00024 8.5e-148 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
PMPDDMJF_00025 7.5e-155 recT L RecT family
PMPDDMJF_00028 1.3e-15
PMPDDMJF_00032 1.6e-07 K Helix-turn-helix
PMPDDMJF_00033 4.2e-53 3.4.21.88 K Helix-turn-helix domain
PMPDDMJF_00034 1.1e-74 E Zn peptidase
PMPDDMJF_00035 4.8e-73
PMPDDMJF_00036 7.8e-50 S Domain of unknown function (DUF4352)
PMPDDMJF_00037 1.3e-104 L Belongs to the 'phage' integrase family
PMPDDMJF_00038 1.1e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PMPDDMJF_00039 6.5e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PMPDDMJF_00040 5e-221 mdtG EGP Major facilitator Superfamily
PMPDDMJF_00041 1.6e-154 K acetyltransferase
PMPDDMJF_00042 3.1e-66
PMPDDMJF_00043 1.9e-217 yceI G Sugar (and other) transporter
PMPDDMJF_00044 2.5e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PMPDDMJF_00045 1.3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PMPDDMJF_00046 8.2e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PMPDDMJF_00047 0.0 mgtA 3.6.3.2, 3.6.3.6 P COG0474 Cation transport ATPase
PMPDDMJF_00048 7.7e-269 nylA 3.5.1.4 J Belongs to the amidase family
PMPDDMJF_00049 1.1e-65 frataxin S Domain of unknown function (DU1801)
PMPDDMJF_00050 1.5e-92 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S Cobalamin adenosyltransferase
PMPDDMJF_00051 3.2e-93 S ECF transporter, substrate-specific component
PMPDDMJF_00052 2e-62 S Domain of unknown function (DUF4430)
PMPDDMJF_00053 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
PMPDDMJF_00054 1.4e-77 F Nucleoside 2-deoxyribosyltransferase
PMPDDMJF_00055 3.8e-159 S Alpha/beta hydrolase of unknown function (DUF915)
PMPDDMJF_00056 3.4e-100 nusG K Participates in transcription elongation, termination and antitermination
PMPDDMJF_00057 1.6e-21 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PMPDDMJF_00058 2e-155 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PMPDDMJF_00059 1.1e-167 menA 2.5.1.74 M UbiA prenyltransferase family
PMPDDMJF_00060 4.4e-197 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMPDDMJF_00061 1.2e-137 cad S FMN_bind
PMPDDMJF_00062 0.0 ndh 1.6.99.3 C NADH dehydrogenase
PMPDDMJF_00063 1.2e-79 ynhH S NusG domain II
PMPDDMJF_00064 1.2e-98 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
PMPDDMJF_00065 5.5e-178 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMPDDMJF_00068 7e-93 1.5.1.40 S Rossmann-like domain
PMPDDMJF_00069 5.7e-189 XK27_00915 C Luciferase-like monooxygenase
PMPDDMJF_00071 2.4e-98 yacP S YacP-like NYN domain
PMPDDMJF_00072 1.4e-139 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMPDDMJF_00073 8.5e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PMPDDMJF_00074 1.4e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMPDDMJF_00075 1.6e-260 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
PMPDDMJF_00076 2.3e-107
PMPDDMJF_00078 6.2e-274 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PMPDDMJF_00079 4.3e-183 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PMPDDMJF_00080 2.3e-76 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PMPDDMJF_00081 9.1e-142 K SIS domain
PMPDDMJF_00082 6.9e-113 yhfC S Putative membrane peptidase family (DUF2324)
PMPDDMJF_00083 6.9e-176 S Membrane
PMPDDMJF_00084 8e-61 K helix_turn_helix gluconate operon transcriptional repressor
PMPDDMJF_00085 1.7e-216 inlJ M MucBP domain
PMPDDMJF_00086 1.2e-202 yacL S domain protein
PMPDDMJF_00087 6.5e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PMPDDMJF_00088 9.6e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTPase
PMPDDMJF_00089 2.9e-50 HA62_12640 S GCN5-related N-acetyl-transferase
PMPDDMJF_00090 9.5e-70 S Protein of unknown function (DUF805)
PMPDDMJF_00091 3.6e-257 pepC 3.4.22.40 E aminopeptidase
PMPDDMJF_00092 9.3e-261 pepC 3.4.22.40 E Peptidase C1-like family
PMPDDMJF_00093 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PMPDDMJF_00095 1.1e-254 bmr3 EGP Major facilitator Superfamily
PMPDDMJF_00096 1e-99 yobS K Bacterial regulatory proteins, tetR family
PMPDDMJF_00097 1.3e-245 yhgE V domain protein
PMPDDMJF_00098 4e-47 S Thiamine-binding protein
PMPDDMJF_00099 3.2e-138 magIII L Base excision DNA repair protein, HhH-GPD family
PMPDDMJF_00100 1.1e-158 pphA 3.1.3.16 T Calcineurin-like phosphoesterase superfamily domain
PMPDDMJF_00101 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMPDDMJF_00102 1.1e-253 rarA L recombination factor protein RarA
PMPDDMJF_00103 1.2e-57
PMPDDMJF_00104 7.7e-172 yhaI S Protein of unknown function (DUF805)
PMPDDMJF_00105 1.7e-268 L Mga helix-turn-helix domain
PMPDDMJF_00107 1.1e-182 ynjC S Cell surface protein
PMPDDMJF_00108 3.8e-123 S WxL domain surface cell wall-binding
PMPDDMJF_00109 1.3e-121 S WxL domain surface cell wall-binding
PMPDDMJF_00111 0.0
PMPDDMJF_00112 5.8e-103 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PMPDDMJF_00113 4.9e-29
PMPDDMJF_00114 1.7e-179 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PMPDDMJF_00115 6.3e-46 S DsrE/DsrF-like family
PMPDDMJF_00116 9.1e-254 pbuO S permease
PMPDDMJF_00117 1.4e-41 S Protein of unknown function (DUF1516)
PMPDDMJF_00118 2e-53 ypaA S Protein of unknown function (DUF1304)
PMPDDMJF_00119 2e-161 1.6.5.5 C alcohol dehydrogenase
PMPDDMJF_00120 3.2e-81 slyA K Transcriptional regulator
PMPDDMJF_00121 2.3e-42
PMPDDMJF_00122 1.1e-192 ldhD3 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMPDDMJF_00123 2.6e-88 ogt 2.1.1.63 L Methyltransferase
PMPDDMJF_00124 4e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PMPDDMJF_00125 1.5e-42
PMPDDMJF_00126 7.3e-208 mccF V LD-carboxypeptidase
PMPDDMJF_00127 1.8e-181 I PAP2 superfamily
PMPDDMJF_00128 4.8e-42 S Protein of unknown function (DUF2089)
PMPDDMJF_00129 1e-36
PMPDDMJF_00130 2.4e-256 C COG0277 FAD FMN-containing dehydrogenases
PMPDDMJF_00131 5.5e-141 T Calcineurin-like phosphoesterase superfamily domain
PMPDDMJF_00132 3.3e-258
PMPDDMJF_00133 2.4e-99 K Bacteriophage CI repressor helix-turn-helix domain
PMPDDMJF_00135 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PMPDDMJF_00136 2.7e-132 S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PMPDDMJF_00137 1e-165 yxlF V ABC transporter
PMPDDMJF_00138 4.8e-34 S Phospholipase_D-nuclease N-terminal
PMPDDMJF_00139 4.3e-203 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_00140 2.3e-159 lysR5 K LysR substrate binding domain
PMPDDMJF_00141 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PMPDDMJF_00142 1.1e-56 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
PMPDDMJF_00143 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
PMPDDMJF_00144 2.4e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PMPDDMJF_00145 1.8e-119 K Helix-turn-helix domain, rpiR family
PMPDDMJF_00146 7.6e-129 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PMPDDMJF_00147 1.1e-273 sacX 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PMPDDMJF_00148 5.4e-217
PMPDDMJF_00149 4.6e-247 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PMPDDMJF_00150 9e-75 rplI J Binds to the 23S rRNA
PMPDDMJF_00151 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PMPDDMJF_00152 3.7e-94 V ABC transporter, ATP-binding protein
PMPDDMJF_00154 0.0 helD 3.6.4.12 L DNA helicase
PMPDDMJF_00155 8.6e-148 rlrG K Transcriptional regulator
PMPDDMJF_00156 4.5e-172 shetA P Voltage-dependent anion channel
PMPDDMJF_00157 2.8e-114 S CAAX protease self-immunity
PMPDDMJF_00159 1.6e-115 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMPDDMJF_00160 4e-69 K MarR family
PMPDDMJF_00161 0.0 uvrA3 L excinuclease ABC
PMPDDMJF_00162 8.1e-193 yghZ C Aldo keto reductase family protein
PMPDDMJF_00163 7.3e-144 S hydrolase
PMPDDMJF_00164 8.1e-60
PMPDDMJF_00165 4.1e-11
PMPDDMJF_00166 6.2e-104 yoaK S Protein of unknown function (DUF1275)
PMPDDMJF_00167 6.4e-125 yjhF G Phosphoglycerate mutase family
PMPDDMJF_00168 4.3e-152 yitU 3.1.3.104 S hydrolase
PMPDDMJF_00169 9.8e-88 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMPDDMJF_00170 1.7e-165 K LysR substrate binding domain
PMPDDMJF_00171 1.3e-226 EK Aminotransferase, class I
PMPDDMJF_00172 4.9e-181 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PMPDDMJF_00173 2e-118 ydfK S Protein of unknown function (DUF554)
PMPDDMJF_00174 2.5e-88
PMPDDMJF_00175 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMPDDMJF_00176 3.3e-172 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
PMPDDMJF_00177 2.8e-129 rpl K Helix-turn-helix domain, rpiR family
PMPDDMJF_00178 1.2e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMPDDMJF_00179 1.9e-132 L Transposase, IS116 IS110 IS902 family
PMPDDMJF_00181 1.1e-293 plyA3 M Right handed beta helix region
PMPDDMJF_00182 8.5e-62
PMPDDMJF_00183 0.0 M Heparinase II/III N-terminus
PMPDDMJF_00185 5.1e-81 G PTS system fructose IIA component
PMPDDMJF_00186 5.6e-144 agaD G PTS system mannose/fructose/sorbose family IID component
PMPDDMJF_00187 4.3e-144 G PTS system sorbose-specific iic component
PMPDDMJF_00188 1.2e-88 agaV 2.7.1.191 G PTS system sorbose subfamily IIB component
PMPDDMJF_00189 2e-235 ugl 3.2.1.180 GH88 S Glycosyl Hydrolase Family 88
PMPDDMJF_00190 4.5e-157 Z012_03480 S Psort location Cytoplasmic, score
PMPDDMJF_00191 5.1e-139 K Bacterial transcriptional regulator
PMPDDMJF_00192 7.3e-163 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PMPDDMJF_00193 4.8e-151 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PMPDDMJF_00194 1.8e-116 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PMPDDMJF_00195 1.5e-194 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
PMPDDMJF_00196 3.5e-117 alkD L DNA alkylation repair enzyme
PMPDDMJF_00197 3.4e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PMPDDMJF_00198 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PMPDDMJF_00199 1.2e-169 ykoT GT2 M Glycosyl transferase family 2
PMPDDMJF_00200 1.4e-119 lssY 3.6.1.27 I phosphatase
PMPDDMJF_00201 8e-117 dedA S SNARE-like domain protein
PMPDDMJF_00202 1e-238 T PhoQ Sensor
PMPDDMJF_00203 1.6e-126 K Transcriptional regulatory protein, C terminal
PMPDDMJF_00205 1.5e-17
PMPDDMJF_00206 2e-238 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PMPDDMJF_00207 1e-182 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PMPDDMJF_00208 4.4e-104 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PMPDDMJF_00209 0.0 4.2.2.1 PL8 N Polysaccharide lyase family 8, N terminal alpha-helical domain
PMPDDMJF_00210 5.4e-192 S Protein of unknown function C-terminal (DUF3324)
PMPDDMJF_00211 1.2e-87
PMPDDMJF_00212 2e-18 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PMPDDMJF_00213 1.3e-116 sodA 1.15.1.1 C Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PMPDDMJF_00214 1.3e-157 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PMPDDMJF_00215 8.9e-158 I alpha/beta hydrolase fold
PMPDDMJF_00216 1.6e-28
PMPDDMJF_00217 9.3e-74
PMPDDMJF_00218 6.8e-153 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PMPDDMJF_00219 1.1e-124 citR K FCD
PMPDDMJF_00220 3.4e-266 oadA 2.1.3.1, 4.1.1.3, 6.4.1.1, 6.4.1.7 C Conserved carboxylase domain
PMPDDMJF_00221 6.9e-93 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PMPDDMJF_00222 5.9e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PMPDDMJF_00223 9e-156 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PMPDDMJF_00224 1.3e-48 citD C Covalent carrier of the coenzyme of citrate lyase
PMPDDMJF_00225 1e-179 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PMPDDMJF_00227 1.8e-196 oadB 4.1.1.3 C Na+-transporting oxaloacetate decarboxylase beta subunit
PMPDDMJF_00228 6.2e-40 gcdC 2.3.1.12 I Biotin-requiring enzyme
PMPDDMJF_00229 1.2e-52
PMPDDMJF_00230 4.8e-241 citM C Citrate transporter
PMPDDMJF_00231 2.8e-41
PMPDDMJF_00232 5.1e-104 kptA J Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
PMPDDMJF_00233 1.6e-88 K GNAT family
PMPDDMJF_00234 1.2e-106 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PMPDDMJF_00235 9.7e-58 K Transcriptional regulator PadR-like family
PMPDDMJF_00236 1.2e-88 ORF00048
PMPDDMJF_00237 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PMPDDMJF_00238 2.6e-169 yjjC V ABC transporter
PMPDDMJF_00239 2.9e-293 M Exporter of polyketide antibiotics
PMPDDMJF_00240 9.6e-115 K Transcriptional regulator
PMPDDMJF_00241 4.1e-259 EGP Major facilitator Superfamily
PMPDDMJF_00242 6.2e-126 S membrane transporter protein
PMPDDMJF_00243 9.5e-181 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_00244 1.3e-159 S Alpha beta hydrolase
PMPDDMJF_00245 1.2e-59 yvoA_1 K Transcriptional regulator, GntR family
PMPDDMJF_00246 1.1e-124 skfE V ATPases associated with a variety of cellular activities
PMPDDMJF_00247 6.7e-19
PMPDDMJF_00248 2.6e-141
PMPDDMJF_00249 1.1e-87 V ATPases associated with a variety of cellular activities
PMPDDMJF_00250 6.7e-96 ydaF J Acetyltransferase (GNAT) domain
PMPDDMJF_00251 7.4e-158 oppF P Oligopeptide/dipeptide transporter, C-terminal region
PMPDDMJF_00252 9.6e-200 oppD P Oligopeptide/dipeptide transporter, C-terminal region
PMPDDMJF_00253 8.5e-24
PMPDDMJF_00254 7.4e-175 amiD EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMPDDMJF_00255 4.2e-167 oppB P Binding-protein-dependent transport system inner membrane component
PMPDDMJF_00256 6.9e-290 E Bacterial extracellular solute-binding proteins, family 5 Middle
PMPDDMJF_00257 1.6e-128 hchA S DJ-1/PfpI family
PMPDDMJF_00258 4.6e-52 K Transcriptional
PMPDDMJF_00259 2.1e-36
PMPDDMJF_00260 2.4e-131 V ABC transporter transmembrane region
PMPDDMJF_00261 2.9e-88 V ABC transporter transmembrane region
PMPDDMJF_00262 3.1e-215 V ABC transporter transmembrane region
PMPDDMJF_00264 4.6e-67 S Iron-sulphur cluster biosynthesis
PMPDDMJF_00265 1.4e-15 2.7.1.39 S Phosphotransferase enzyme family
PMPDDMJF_00266 2.2e-253 lytN 3.5.1.104 M LysM domain
PMPDDMJF_00267 3.4e-135 zmp3 O Zinc-dependent metalloprotease
PMPDDMJF_00269 2.8e-129 repA K DeoR C terminal sensor domain
PMPDDMJF_00272 1e-48 lciIC K Helix-turn-helix XRE-family like proteins
PMPDDMJF_00273 1.5e-86 yjdB S Domain of unknown function (DUF4767)
PMPDDMJF_00274 2.8e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PMPDDMJF_00275 3.6e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PMPDDMJF_00276 2.5e-280 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PMPDDMJF_00277 8.6e-163 K Transcriptional regulator
PMPDDMJF_00278 7.6e-199 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PMPDDMJF_00281 2.1e-85 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMPDDMJF_00282 1.4e-50 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
PMPDDMJF_00283 1.6e-266 gatC G PTS system sugar-specific permease component
PMPDDMJF_00284 5.6e-26
PMPDDMJF_00285 4.6e-123 S Domain of unknown function (DUF4867)
PMPDDMJF_00286 4.9e-176 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
PMPDDMJF_00287 2.5e-186 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
PMPDDMJF_00288 2.9e-93 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
PMPDDMJF_00289 2.7e-73 lacA 5.3.1.26 G Ribose/Galactose Isomerase
PMPDDMJF_00290 4.2e-141 lacR K DeoR C terminal sensor domain
PMPDDMJF_00291 3.8e-116 gph 3.1.3.18 S HAD hydrolase, family IA, variant
PMPDDMJF_00292 6.2e-210 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PMPDDMJF_00293 0.0 sbcC L Putative exonuclease SbcCD, C subunit
PMPDDMJF_00294 2.1e-14
PMPDDMJF_00295 2.2e-76 hsp1 O Belongs to the small heat shock protein (HSP20) family
PMPDDMJF_00297 4.2e-211 mutY L A G-specific adenine glycosylase
PMPDDMJF_00298 2.5e-149 cytC6 I alpha/beta hydrolase fold
PMPDDMJF_00299 2.1e-120 yrkL S Flavodoxin-like fold
PMPDDMJF_00301 1.5e-86 S Short repeat of unknown function (DUF308)
PMPDDMJF_00302 4.1e-118 S Psort location Cytoplasmic, score
PMPDDMJF_00303 1.6e-154 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PMPDDMJF_00304 1.4e-195
PMPDDMJF_00305 3.9e-07
PMPDDMJF_00306 1.5e-115 ywnB S NAD(P)H-binding
PMPDDMJF_00307 0.0 bglB 3.2.1.21 GH3 G hydrolase, family 3
PMPDDMJF_00308 6.1e-166 XK27_00670 S ABC transporter substrate binding protein
PMPDDMJF_00309 3.1e-165 XK27_00670 S ABC transporter
PMPDDMJF_00310 1.9e-154 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
PMPDDMJF_00311 8.8e-142 cmpC S ABC transporter, ATP-binding protein
PMPDDMJF_00312 8e-174 yhfP 1.1.1.1 C Zinc-binding dehydrogenase
PMPDDMJF_00313 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
PMPDDMJF_00314 6.2e-182 ykcC GT2 M Glycosyl transferase family 2
PMPDDMJF_00315 0.0 ykcB M Dolichyl-phosphate-mannose-protein mannosyltransferase
PMPDDMJF_00316 4.1e-71 S GtrA-like protein
PMPDDMJF_00317 5.3e-124 K cheY-homologous receiver domain
PMPDDMJF_00318 2.7e-241 ciaH 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PMPDDMJF_00319 3.1e-68 yqkB S Belongs to the HesB IscA family
PMPDDMJF_00320 1.4e-92 QT PucR C-terminal helix-turn-helix domain
PMPDDMJF_00321 1.4e-165 QT PucR C-terminal helix-turn-helix domain
PMPDDMJF_00322 1.4e-161 ptlF S KR domain
PMPDDMJF_00323 1.4e-158 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PMPDDMJF_00324 1.1e-121 drgA C Nitroreductase family
PMPDDMJF_00325 1.2e-68 lctO C IMP dehydrogenase / GMP reductase domain
PMPDDMJF_00326 1.1e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PMPDDMJF_00327 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PMPDDMJF_00328 1.9e-107 K Bacterial regulatory proteins, tetR family
PMPDDMJF_00329 2.1e-183 yxeA V FtsX-like permease family
PMPDDMJF_00330 4.6e-126 devA 3.6.3.25 V ATPases associated with a variety of cellular activities
PMPDDMJF_00331 1.1e-33
PMPDDMJF_00332 1.3e-110 tipA K TipAS antibiotic-recognition domain
PMPDDMJF_00333 1.1e-20 M1-1017
PMPDDMJF_00334 8.2e-33 K Transcriptional regulator PadR-like family
PMPDDMJF_00335 3.2e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PMPDDMJF_00336 8.7e-142 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMPDDMJF_00337 6e-157 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMPDDMJF_00338 1.6e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMPDDMJF_00339 4.5e-115
PMPDDMJF_00340 4.8e-61 rplQ J Ribosomal protein L17
PMPDDMJF_00341 3.6e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMPDDMJF_00342 4e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PMPDDMJF_00343 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PMPDDMJF_00344 6.6e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PMPDDMJF_00345 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PMPDDMJF_00346 4.6e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PMPDDMJF_00347 2e-231 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PMPDDMJF_00348 6.5e-62 rplO J Binds to the 23S rRNA
PMPDDMJF_00349 3.9e-24 rpmD J Ribosomal protein L30
PMPDDMJF_00350 1.2e-83 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PMPDDMJF_00351 1.8e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PMPDDMJF_00352 1.7e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PMPDDMJF_00353 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PMPDDMJF_00354 8.5e-96 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PMPDDMJF_00355 6.9e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PMPDDMJF_00356 2.1e-58 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PMPDDMJF_00357 1.9e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PMPDDMJF_00358 1.1e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
PMPDDMJF_00359 2.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PMPDDMJF_00360 6.2e-109 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PMPDDMJF_00361 1.1e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PMPDDMJF_00362 2.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PMPDDMJF_00363 2.9e-156 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PMPDDMJF_00364 2e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PMPDDMJF_00365 1.7e-108 rplD J Forms part of the polypeptide exit tunnel
PMPDDMJF_00366 4e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PMPDDMJF_00367 2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PMPDDMJF_00368 3.5e-68 psiE S Phosphate-starvation-inducible E
PMPDDMJF_00369 1.9e-106 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
PMPDDMJF_00370 1e-198 yfjR K WYL domain
PMPDDMJF_00371 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PMPDDMJF_00372 8.4e-84 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PMPDDMJF_00373 1.2e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PMPDDMJF_00374 0.0 M domain protein
PMPDDMJF_00375 0.0 M domain protein
PMPDDMJF_00376 3.1e-36 3.4.23.43
PMPDDMJF_00377 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMPDDMJF_00378 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMPDDMJF_00379 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PMPDDMJF_00380 4.3e-80 ctsR K Belongs to the CtsR family
PMPDDMJF_00389 2.1e-85 ykuL S CBS domain
PMPDDMJF_00390 2.5e-135 gla U Major intrinsic protein
PMPDDMJF_00391 2.5e-97 S Phosphoesterase
PMPDDMJF_00392 3.8e-276 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PMPDDMJF_00393 8.8e-84 yslB S Protein of unknown function (DUF2507)
PMPDDMJF_00394 1.5e-244 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PMPDDMJF_00395 1.2e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMPDDMJF_00396 2.6e-238 dltB M MBOAT, membrane-bound O-acyltransferase family
PMPDDMJF_00397 1.1e-294 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMPDDMJF_00398 6.1e-20 dltX S D-Ala-teichoic acid biosynthesis protein
PMPDDMJF_00399 6.6e-53 trxA O Belongs to the thioredoxin family
PMPDDMJF_00400 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PMPDDMJF_00401 9.6e-92 cvpA S Colicin V production protein
PMPDDMJF_00402 5.8e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PMPDDMJF_00403 6.8e-53 yrzB S Belongs to the UPF0473 family
PMPDDMJF_00404 1.6e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PMPDDMJF_00405 4e-43 yrzL S Belongs to the UPF0297 family
PMPDDMJF_00407 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PMPDDMJF_00408 7.8e-174
PMPDDMJF_00409 4.3e-250 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PMPDDMJF_00410 3.7e-179 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PMPDDMJF_00411 2.3e-240 ytoI K DRTGG domain
PMPDDMJF_00412 1.2e-205 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PMPDDMJF_00413 3.3e-291 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PMPDDMJF_00414 2.3e-116 sirR K Helix-turn-helix diphteria tox regulatory element
PMPDDMJF_00415 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PMPDDMJF_00416 1.2e-65 yajC U Preprotein translocase
PMPDDMJF_00417 2.3e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PMPDDMJF_00418 2.1e-207 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PMPDDMJF_00419 3.2e-189 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PMPDDMJF_00420 6e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PMPDDMJF_00421 1.4e-104 yjbF S SNARE associated Golgi protein
PMPDDMJF_00422 2.2e-87 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PMPDDMJF_00423 1.6e-221 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
PMPDDMJF_00425 3.5e-74 S Protein of unknown function (DUF3290)
PMPDDMJF_00426 6.6e-119 yviA S Protein of unknown function (DUF421)
PMPDDMJF_00427 2e-144 S Alpha beta hydrolase
PMPDDMJF_00428 1.7e-155
PMPDDMJF_00429 1.3e-156 dkgB S reductase
PMPDDMJF_00430 2.5e-83 nrdI F Belongs to the NrdI family
PMPDDMJF_00431 5.2e-178 D Alpha beta
PMPDDMJF_00432 3.3e-77 K Transcriptional regulator
PMPDDMJF_00433 8.5e-122 gph 3.1.3.18 S haloacid dehalogenase-like hydrolase
PMPDDMJF_00434 8.7e-199 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMPDDMJF_00435 2.6e-94 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PMPDDMJF_00436 2.6e-45
PMPDDMJF_00437 1.9e-180 3.4.11.5 I carboxylic ester hydrolase activity
PMPDDMJF_00438 0.0 yfgQ P E1-E2 ATPase
PMPDDMJF_00439 1.9e-80 ndk 2.7.4.6 F Belongs to the NDK family
PMPDDMJF_00440 4.4e-132 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PMPDDMJF_00441 1.5e-71 pheB 5.4.99.5 S Belongs to the UPF0735 family
PMPDDMJF_00442 1e-63
PMPDDMJF_00443 1.3e-54
PMPDDMJF_00444 1.2e-252 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PMPDDMJF_00446 2e-190 S response to antibiotic
PMPDDMJF_00447 1.3e-129 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PMPDDMJF_00448 8.4e-27 yjgN S Bacterial protein of unknown function (DUF898)
PMPDDMJF_00450 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PMPDDMJF_00451 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PMPDDMJF_00452 3.4e-211 camS S sex pheromone
PMPDDMJF_00453 3.7e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMPDDMJF_00454 5.1e-265 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PMPDDMJF_00455 8e-279 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMPDDMJF_00456 4.4e-194 yegS 2.7.1.107 G Lipid kinase
PMPDDMJF_00457 1.3e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMPDDMJF_00458 3.6e-219 yttB EGP Major facilitator Superfamily
PMPDDMJF_00459 2e-144 cof S Sucrose-6F-phosphate phosphohydrolase
PMPDDMJF_00460 1.5e-163 S Polyphosphate nucleotide phosphotransferase, PPK2 family
PMPDDMJF_00461 0.0 pepO 3.4.24.71 O Peptidase family M13
PMPDDMJF_00462 5e-265 ydiC1 EGP Major facilitator Superfamily
PMPDDMJF_00463 1.1e-78 K Acetyltransferase (GNAT) family
PMPDDMJF_00464 1.2e-165 degV S Uncharacterised protein, DegV family COG1307
PMPDDMJF_00465 1.9e-119 qmcA O prohibitin homologues
PMPDDMJF_00466 1.2e-28
PMPDDMJF_00467 9.3e-138 lys M Glycosyl hydrolases family 25
PMPDDMJF_00468 2.2e-60 S Protein of unknown function (DUF1093)
PMPDDMJF_00469 1.7e-60 S Domain of unknown function (DUF4828)
PMPDDMJF_00470 2.5e-175 mocA S Oxidoreductase
PMPDDMJF_00471 1.1e-223 yfmL 3.6.4.13 L DEAD DEAH box helicase
PMPDDMJF_00472 7.6e-56 chbA 2.7.1.196, 2.7.1.205 G phosphoenolpyruvate-dependent sugar phosphotransferase system
PMPDDMJF_00473 7.3e-71 S Domain of unknown function (DUF3284)
PMPDDMJF_00475 7.5e-07
PMPDDMJF_00476 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PMPDDMJF_00477 2.7e-238 pepS E Thermophilic metalloprotease (M29)
PMPDDMJF_00478 2.1e-111 K Bacterial regulatory proteins, tetR family
PMPDDMJF_00479 2.6e-258 S Uncharacterized protein conserved in bacteria (DUF2252)
PMPDDMJF_00480 6e-180 yihY S Belongs to the UPF0761 family
PMPDDMJF_00481 7.2e-80 fld C Flavodoxin
PMPDDMJF_00482 8.2e-159 map 3.4.11.18 E Methionine Aminopeptidase
PMPDDMJF_00483 3.8e-201 M Glycosyltransferase like family 2
PMPDDMJF_00485 3.1e-14
PMPDDMJF_00486 5.2e-198 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PMPDDMJF_00487 5.7e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PMPDDMJF_00490 6.7e-64 gntP EG Gluconate
PMPDDMJF_00491 1.9e-305 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PMPDDMJF_00492 1.2e-168 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
PMPDDMJF_00493 2.5e-123 gntR K rpiR family
PMPDDMJF_00494 1e-164 yvgN C Aldo keto reductase
PMPDDMJF_00495 1.8e-141 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
PMPDDMJF_00496 3.6e-293 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PMPDDMJF_00497 8.6e-68 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMPDDMJF_00498 1.8e-237 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PMPDDMJF_00499 3.9e-218 hpk31 2.7.13.3 T Histidine kinase
PMPDDMJF_00500 1.9e-121 K response regulator
PMPDDMJF_00501 4.7e-120
PMPDDMJF_00502 2.5e-275 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMPDDMJF_00503 3e-105 XK27_01040 S Protein of unknown function (DUF1129)
PMPDDMJF_00504 1.3e-185 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PMPDDMJF_00505 1.8e-29 yyzM S Bacterial protein of unknown function (DUF951)
PMPDDMJF_00506 5.2e-156 spo0J K Belongs to the ParB family
PMPDDMJF_00507 9.7e-138 soj D Sporulation initiation inhibitor
PMPDDMJF_00508 4e-137 noc K Belongs to the ParB family
PMPDDMJF_00509 4.1e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PMPDDMJF_00510 1.3e-66
PMPDDMJF_00511 3e-127 cobQ S glutamine amidotransferase
PMPDDMJF_00512 6.5e-108 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
PMPDDMJF_00513 2.5e-118 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PMPDDMJF_00514 3.7e-152 S Protein of unknown function (DUF979)
PMPDDMJF_00515 3.3e-113 S Protein of unknown function (DUF969)
PMPDDMJF_00517 1.6e-62 asp2 S Asp23 family, cell envelope-related function
PMPDDMJF_00518 7.4e-68 asp23 S Asp23 family, cell envelope-related function
PMPDDMJF_00519 2.8e-25
PMPDDMJF_00520 5.3e-82 S Protein conserved in bacteria
PMPDDMJF_00521 3.5e-39 S Transglycosylase associated protein
PMPDDMJF_00522 1.4e-71 pdxH S Pyridoxamine 5'-phosphate oxidase
PMPDDMJF_00523 1.9e-170 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMPDDMJF_00524 1.1e-26
PMPDDMJF_00525 1.2e-36
PMPDDMJF_00526 2.4e-83 fld C Flavodoxin
PMPDDMJF_00527 2.8e-48
PMPDDMJF_00528 6.5e-90
PMPDDMJF_00530 1e-55 ywjH S Protein of unknown function (DUF1634)
PMPDDMJF_00531 4.6e-125 yxaA S Sulfite exporter TauE/SafE
PMPDDMJF_00532 5.6e-218 S TPM domain
PMPDDMJF_00533 1.7e-116
PMPDDMJF_00534 7.2e-261 nox 1.6.3.4 C NADH oxidase
PMPDDMJF_00535 0.0 fnq20 1.13.12.16 S FAD-NAD(P)-binding
PMPDDMJF_00536 1.4e-111 gadR K Helix-turn-helix XRE-family like proteins
PMPDDMJF_00537 1.9e-225 V ABC transporter transmembrane region
PMPDDMJF_00538 1.2e-213 S nuclear-transcribed mRNA catabolic process, no-go decay
PMPDDMJF_00539 6.4e-76 S NUDIX domain
PMPDDMJF_00540 1.1e-43
PMPDDMJF_00541 1.5e-89 V ATPases associated with a variety of cellular activities
PMPDDMJF_00542 1.3e-67
PMPDDMJF_00543 3e-53
PMPDDMJF_00544 4.1e-83
PMPDDMJF_00545 1.4e-298 oppA E ABC transporter, substratebinding protein
PMPDDMJF_00546 9.2e-231 cinA 3.5.1.42 S Belongs to the CinA family
PMPDDMJF_00547 4.7e-191 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PMPDDMJF_00548 3.1e-231 rny S Endoribonuclease that initiates mRNA decay
PMPDDMJF_00549 2.6e-115 yvyE 3.4.13.9 S YigZ family
PMPDDMJF_00550 1.7e-235 comFA L Helicase C-terminal domain protein
PMPDDMJF_00551 6.6e-82 comFC S Competence protein
PMPDDMJF_00552 2.1e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PMPDDMJF_00553 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PMPDDMJF_00554 3.9e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PMPDDMJF_00555 5.4e-124 ftsE D ABC transporter
PMPDDMJF_00557 3.6e-202 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
PMPDDMJF_00558 2.4e-130 K response regulator
PMPDDMJF_00559 1.1e-308 phoR 2.7.13.3 T Histidine kinase
PMPDDMJF_00560 1.2e-152 pstS P Phosphate
PMPDDMJF_00561 3.6e-155 pstC P probably responsible for the translocation of the substrate across the membrane
PMPDDMJF_00562 4.8e-157 pstA P Phosphate transport system permease protein PstA
PMPDDMJF_00563 4.5e-149 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMPDDMJF_00564 9.3e-141 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMPDDMJF_00565 1e-119 phoU P Plays a role in the regulation of phosphate uptake
PMPDDMJF_00566 2.4e-262 yvlB S Putative adhesin
PMPDDMJF_00567 1.4e-30
PMPDDMJF_00568 7.4e-34 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PMPDDMJF_00569 2.1e-174 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PMPDDMJF_00570 9.5e-166 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PMPDDMJF_00571 6.9e-195 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PMPDDMJF_00572 2.4e-178 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PMPDDMJF_00573 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PMPDDMJF_00574 2.2e-114 T Transcriptional regulatory protein, C terminal
PMPDDMJF_00575 1.7e-174 T His Kinase A (phosphoacceptor) domain
PMPDDMJF_00576 4.5e-91 V ABC transporter
PMPDDMJF_00577 0.0 V FtsX-like permease family
PMPDDMJF_00578 6.5e-119 yfbR S HD containing hydrolase-like enzyme
PMPDDMJF_00579 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PMPDDMJF_00580 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PMPDDMJF_00581 8.7e-85 S Short repeat of unknown function (DUF308)
PMPDDMJF_00582 9.7e-166 rapZ S Displays ATPase and GTPase activities
PMPDDMJF_00583 2.4e-192 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PMPDDMJF_00584 8.2e-171 whiA K May be required for sporulation
PMPDDMJF_00585 3.2e-80 ohrR K helix_turn_helix multiple antibiotic resistance protein
PMPDDMJF_00586 1.9e-101 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PMPDDMJF_00589 9.4e-12 XK27_02675 K Acetyltransferase (GNAT) domain
PMPDDMJF_00591 1.5e-109 1.6.5.2 S Flavodoxin-like fold
PMPDDMJF_00592 1e-97 K Bacterial regulatory proteins, tetR family
PMPDDMJF_00593 3.2e-144 hutG 3.5.3.8 E N-formylglutamate amidohydrolase
PMPDDMJF_00594 3.6e-54 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
PMPDDMJF_00595 5.8e-91 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PMPDDMJF_00596 5.3e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PMPDDMJF_00597 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PMPDDMJF_00598 1.8e-57
PMPDDMJF_00599 1.4e-81 6.3.3.2 S ASCH
PMPDDMJF_00600 1.8e-23
PMPDDMJF_00601 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PMPDDMJF_00602 1.9e-193 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PMPDDMJF_00603 4.4e-309 dnaK O Heat shock 70 kDa protein
PMPDDMJF_00604 3.4e-98 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PMPDDMJF_00605 4.2e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PMPDDMJF_00606 5.3e-225 hemN H Involved in the biosynthesis of porphyrin-containing compound
PMPDDMJF_00607 3.1e-178 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PMPDDMJF_00608 4.4e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PMPDDMJF_00609 1e-142 terC P Integral membrane protein TerC family
PMPDDMJF_00610 4.6e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PMPDDMJF_00611 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PMPDDMJF_00612 6.5e-45 ylxQ J ribosomal protein
PMPDDMJF_00613 1.7e-45 ylxR K Protein of unknown function (DUF448)
PMPDDMJF_00614 1.7e-195 nusA K Participates in both transcription termination and antitermination
PMPDDMJF_00615 1.7e-84 rimP J Required for maturation of 30S ribosomal subunits
PMPDDMJF_00616 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMPDDMJF_00617 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PMPDDMJF_00618 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PMPDDMJF_00619 1.2e-138 cdsA 2.7.7.41 S Belongs to the CDS family
PMPDDMJF_00620 2.7e-140 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PMPDDMJF_00621 1.1e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PMPDDMJF_00622 5.9e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PMPDDMJF_00623 1.5e-155 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PMPDDMJF_00624 1e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
PMPDDMJF_00625 5.2e-46 yazA L GIY-YIG catalytic domain protein
PMPDDMJF_00626 4.2e-130 yabB 2.1.1.223 L Methyltransferase small domain
PMPDDMJF_00627 2.6e-123 plsC 2.3.1.51 I Acyltransferase
PMPDDMJF_00628 4e-214 yfnA E Amino Acid
PMPDDMJF_00629 6.7e-142 yejC S Protein of unknown function (DUF1003)
PMPDDMJF_00630 0.0 mdlB V ABC transporter
PMPDDMJF_00631 0.0 mdlA V ABC transporter
PMPDDMJF_00632 4.8e-29 yneF S UPF0154 protein
PMPDDMJF_00633 4e-37 ynzC S UPF0291 protein
PMPDDMJF_00634 2.1e-19
PMPDDMJF_00635 2.9e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PMPDDMJF_00636 1.1e-144 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PMPDDMJF_00637 2.2e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PMPDDMJF_00638 2.2e-38 ylqC S Belongs to the UPF0109 family
PMPDDMJF_00639 1e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PMPDDMJF_00640 6.3e-231 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PMPDDMJF_00641 3.8e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PMPDDMJF_00643 8.8e-53
PMPDDMJF_00644 1.4e-181 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PMPDDMJF_00645 0.0 smc D Required for chromosome condensation and partitioning
PMPDDMJF_00646 1.7e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PMPDDMJF_00647 0.0 oppA1 E ABC transporter substrate-binding protein
PMPDDMJF_00648 1.5e-137 oppC EP Binding-protein-dependent transport system inner membrane component
PMPDDMJF_00649 9.2e-170 oppB P ABC transporter permease
PMPDDMJF_00650 1.4e-178 oppF P Belongs to the ABC transporter superfamily
PMPDDMJF_00651 5.7e-194 oppD P Belongs to the ABC transporter superfamily
PMPDDMJF_00652 8.9e-37 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMPDDMJF_00653 2.3e-187 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PMPDDMJF_00654 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PMPDDMJF_00655 9.3e-311 yloV S DAK2 domain fusion protein YloV
PMPDDMJF_00656 2.3e-57 asp S Asp23 family, cell envelope-related function
PMPDDMJF_00657 2.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PMPDDMJF_00658 2.1e-128 thiN 2.7.6.2 H thiamine pyrophosphokinase
PMPDDMJF_00659 3e-116 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PMPDDMJF_00660 7.6e-174 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PMPDDMJF_00661 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PMPDDMJF_00662 9.7e-135 stp 3.1.3.16 T phosphatase
PMPDDMJF_00663 8.9e-256 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PMPDDMJF_00664 2.2e-176 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PMPDDMJF_00665 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PMPDDMJF_00666 2.1e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PMPDDMJF_00667 1.3e-35 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PMPDDMJF_00668 1.9e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PMPDDMJF_00669 1.6e-91 rssA S Patatin-like phospholipase
PMPDDMJF_00670 1.9e-49
PMPDDMJF_00672 0.0 recN L May be involved in recombinational repair of damaged DNA
PMPDDMJF_00673 2e-74 argR K Regulates arginine biosynthesis genes
PMPDDMJF_00674 1e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PMPDDMJF_00675 4.6e-149 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMPDDMJF_00676 1.6e-32 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMPDDMJF_00677 7.7e-199 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMPDDMJF_00678 4.6e-149 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PMPDDMJF_00679 4.7e-67 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PMPDDMJF_00680 2.2e-76 yqhY S Asp23 family, cell envelope-related function
PMPDDMJF_00681 1.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMPDDMJF_00683 2.7e-202 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PMPDDMJF_00684 1.7e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PMPDDMJF_00685 5.5e-56 ysxB J Cysteine protease Prp
PMPDDMJF_00686 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PMPDDMJF_00687 3.2e-11
PMPDDMJF_00688 1e-16
PMPDDMJF_00690 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PMPDDMJF_00691 5.4e-261 glnA 6.3.1.2 E glutamine synthetase
PMPDDMJF_00692 1e-60 glnR K Transcriptional regulator
PMPDDMJF_00693 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PMPDDMJF_00694 1.4e-239 ynbB 4.4.1.1 P aluminum resistance
PMPDDMJF_00695 2.9e-173 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PMPDDMJF_00696 1.5e-25 WQ51_02665 S Protein of unknown function (DUF3042)
PMPDDMJF_00697 2.6e-73 yqhL P Rhodanese-like protein
PMPDDMJF_00698 5.4e-178 glk 2.7.1.2 G Glucokinase
PMPDDMJF_00699 2.4e-40 yqgQ S Bacterial protein of unknown function (DUF910)
PMPDDMJF_00700 7.3e-121 gluP 3.4.21.105 S Peptidase, S54 family
PMPDDMJF_00701 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PMPDDMJF_00702 0.0 S Bacterial membrane protein YfhO
PMPDDMJF_00703 2.1e-54 yneR S Belongs to the HesB IscA family
PMPDDMJF_00704 6.9e-116 vraR K helix_turn_helix, Lux Regulon
PMPDDMJF_00705 1.4e-179 vraS 2.7.13.3 T Histidine kinase
PMPDDMJF_00706 3.2e-119 yvqF S Cell wall-active antibiotics response 4TMS YvqF
PMPDDMJF_00707 6.9e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMPDDMJF_00708 4.7e-114 udk 2.7.1.48 F Cytidine monophosphokinase
PMPDDMJF_00709 5.2e-204 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PMPDDMJF_00710 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMPDDMJF_00711 1.3e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PMPDDMJF_00712 6.3e-66 yodB K Transcriptional regulator, HxlR family
PMPDDMJF_00713 7.3e-94 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMPDDMJF_00714 5.1e-139 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMPDDMJF_00715 1.9e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PMPDDMJF_00716 1.9e-173 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMPDDMJF_00717 1.5e-289 arlS 2.7.13.3 T Histidine kinase
PMPDDMJF_00718 7.9e-123 K response regulator
PMPDDMJF_00719 3.7e-268 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PMPDDMJF_00720 8e-38 yhcX S Psort location Cytoplasmic, score
PMPDDMJF_00721 4.5e-97 yceD S Uncharacterized ACR, COG1399
PMPDDMJF_00722 1.2e-208 ylbM S Belongs to the UPF0348 family
PMPDDMJF_00723 3.2e-138 yccK Q ubiE/COQ5 methyltransferase family
PMPDDMJF_00724 1.9e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PMPDDMJF_00725 5.6e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PMPDDMJF_00726 5.7e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PMPDDMJF_00727 3.8e-48 yhbY J RNA-binding protein
PMPDDMJF_00728 2.1e-205 yqeH S Ribosome biogenesis GTPase YqeH
PMPDDMJF_00729 2.9e-96 yqeG S HAD phosphatase, family IIIA
PMPDDMJF_00730 1.6e-171 ykcA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PMPDDMJF_00731 1.2e-190 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PMPDDMJF_00732 3.6e-122 mhqD S Dienelactone hydrolase family
PMPDDMJF_00733 1.3e-179 3.5.1.10 C Alcohol dehydrogenase GroES-like domain
PMPDDMJF_00734 1.2e-97 yvdD 3.2.2.10 S Belongs to the LOG family
PMPDDMJF_00735 8.7e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PMPDDMJF_00736 9e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PMPDDMJF_00737 1.5e-77 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PMPDDMJF_00738 8.2e-128 S SseB protein N-terminal domain
PMPDDMJF_00739 1.6e-53
PMPDDMJF_00740 2e-103 yrgI 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
PMPDDMJF_00741 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PMPDDMJF_00742 1.2e-171 dnaI L Primosomal protein DnaI
PMPDDMJF_00743 1.5e-250 dnaB L replication initiation and membrane attachment
PMPDDMJF_00744 7.3e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMPDDMJF_00745 2e-98 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PMPDDMJF_00746 7.9e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PMPDDMJF_00747 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PMPDDMJF_00748 4.2e-119 ybhL S Inhibitor of apoptosis-promoting Bax1
PMPDDMJF_00749 2e-252 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PMPDDMJF_00750 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PMPDDMJF_00751 7.4e-115 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMPDDMJF_00752 1.5e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PMPDDMJF_00754 1.8e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PMPDDMJF_00755 1e-147 ytmP 2.7.1.89 M Choline/ethanolamine kinase
PMPDDMJF_00757 1.7e-213 ecsB U ABC transporter
PMPDDMJF_00758 3.1e-133 ecsA V ABC transporter, ATP-binding protein
PMPDDMJF_00759 1e-75 hit FG histidine triad
PMPDDMJF_00760 2.7e-61 yhaH S YtxH-like protein
PMPDDMJF_00761 8.1e-160 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PMPDDMJF_00762 4e-181 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMPDDMJF_00763 3.9e-54 yheA S Control of competence regulator ComK, YlbF/YmcA
PMPDDMJF_00764 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PMPDDMJF_00765 1.8e-153 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMPDDMJF_00766 5.3e-75 argR K Regulates arginine biosynthesis genes
PMPDDMJF_00767 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PMPDDMJF_00769 1.2e-67
PMPDDMJF_00770 2.1e-22
PMPDDMJF_00771 1.3e-176 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
PMPDDMJF_00772 0.0 glpQ 3.1.4.46 C phosphodiesterase
PMPDDMJF_00773 1.1e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PMPDDMJF_00774 3.2e-68 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PMPDDMJF_00775 3.3e-135 yhfI S Metallo-beta-lactamase superfamily
PMPDDMJF_00776 1.1e-92 traP 1.14.99.57, 6.2.1.3 S heme oxygenase (decyclizing) activity
PMPDDMJF_00777 0.0 V ABC transporter (permease)
PMPDDMJF_00778 9.7e-138 bceA V ABC transporter
PMPDDMJF_00779 5.9e-123 K response regulator
PMPDDMJF_00780 5.9e-205 T PhoQ Sensor
PMPDDMJF_00781 1.6e-108 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMPDDMJF_00782 0.0 copB 3.6.3.4 P P-type ATPase
PMPDDMJF_00783 5.1e-75 copR K Copper transport repressor CopY TcrY
PMPDDMJF_00784 3.4e-233 purD 6.3.4.13 F Belongs to the GARS family
PMPDDMJF_00785 1.1e-286 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PMPDDMJF_00786 7.8e-100 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PMPDDMJF_00787 1.3e-182 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PMPDDMJF_00788 2.9e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PMPDDMJF_00789 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMPDDMJF_00790 1.1e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMPDDMJF_00791 1.9e-40 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PMPDDMJF_00792 5.8e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PMPDDMJF_00793 2.5e-211 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PMPDDMJF_00794 3.2e-78 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PMPDDMJF_00795 4.7e-103 thiT S Thiamine transporter protein (Thia_YuaJ)
PMPDDMJF_00796 1.1e-256 iolT EGP Major facilitator Superfamily
PMPDDMJF_00797 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PMPDDMJF_00798 2.7e-39 ptsH G phosphocarrier protein HPR
PMPDDMJF_00799 2e-28
PMPDDMJF_00800 0.0 clpE O Belongs to the ClpA ClpB family
PMPDDMJF_00801 1.4e-44 XK27_09445 S Domain of unknown function (DUF1827)
PMPDDMJF_00803 6.5e-306 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PMPDDMJF_00804 6.7e-243 hlyX S Transporter associated domain
PMPDDMJF_00805 2.7e-195 yueF S AI-2E family transporter
PMPDDMJF_00806 4e-72 S Acetyltransferase (GNAT) domain
PMPDDMJF_00807 1.2e-94
PMPDDMJF_00808 6.4e-104 ygaC J Belongs to the UPF0374 family
PMPDDMJF_00809 8.7e-142 recX 2.4.1.337 GT4 S Regulatory protein RecX
PMPDDMJF_00810 2.3e-292 frvR K transcriptional antiterminator
PMPDDMJF_00811 2.9e-63
PMPDDMJF_00812 9.8e-250 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMPDDMJF_00813 8.2e-79 F Nucleoside 2-deoxyribosyltransferase
PMPDDMJF_00814 1.8e-133 K UTRA
PMPDDMJF_00815 3.5e-290 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMPDDMJF_00816 9.4e-253 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMPDDMJF_00817 3e-84
PMPDDMJF_00818 2e-49 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PMPDDMJF_00819 6.9e-50 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PMPDDMJF_00820 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMPDDMJF_00821 9.9e-219 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PMPDDMJF_00822 1.6e-201 mvaA 1.1.1.34, 1.1.1.88 C Belongs to the HMG-CoA reductase family
PMPDDMJF_00823 4.2e-209 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PMPDDMJF_00824 1.6e-48
PMPDDMJF_00825 2.6e-160 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
PMPDDMJF_00826 5.7e-103 V Restriction endonuclease
PMPDDMJF_00827 5.8e-157 5.1.3.3 G converts alpha-aldose to the beta-anomer
PMPDDMJF_00828 5.2e-212 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PMPDDMJF_00829 1e-102 S ECF transporter, substrate-specific component
PMPDDMJF_00831 2.1e-79 yodP 2.3.1.264 K Acetyltransferase GNAT Family
PMPDDMJF_00832 8.1e-84 ydcK S Belongs to the SprT family
PMPDDMJF_00833 1.9e-130 XK27_08845 S ABC transporter, ATP-binding protein
PMPDDMJF_00834 4.2e-140 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PMPDDMJF_00835 3.3e-154 XK27_08835 S ABC transporter
PMPDDMJF_00837 2.6e-71
PMPDDMJF_00838 0.0 pacL 3.6.3.8 P P-type ATPase
PMPDDMJF_00839 9.2e-217 V Beta-lactamase
PMPDDMJF_00840 1.3e-151 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PMPDDMJF_00841 1e-196 V Beta-lactamase
PMPDDMJF_00842 7.2e-275 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMPDDMJF_00843 5e-125 gntR1 K UbiC transcription regulator-associated domain protein
PMPDDMJF_00844 2.6e-219 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PMPDDMJF_00845 1.1e-136 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PMPDDMJF_00846 0.0 yuxL 3.4.19.1 E Prolyl oligopeptidase family
PMPDDMJF_00849 2.4e-158 yjjH S Calcineurin-like phosphoesterase
PMPDDMJF_00850 4.6e-266 dtpT U amino acid peptide transporter
PMPDDMJF_00851 0.0 macB_3 V ABC transporter, ATP-binding protein
PMPDDMJF_00852 3.1e-65
PMPDDMJF_00853 3.4e-76 S function, without similarity to other proteins
PMPDDMJF_00854 1.2e-263 G MFS/sugar transport protein
PMPDDMJF_00855 3.2e-230 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
PMPDDMJF_00856 1.6e-57
PMPDDMJF_00857 0.0 pckG 4.1.1.32, 4.1.1.49 C Phosphoenolpyruvate carboxykinase
PMPDDMJF_00858 1.4e-17 S Virus attachment protein p12 family
PMPDDMJF_00859 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PMPDDMJF_00863 3.9e-71
PMPDDMJF_00864 1.1e-209 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PMPDDMJF_00865 3.8e-263 emrY EGP Major facilitator Superfamily
PMPDDMJF_00866 4.3e-80 merR K MerR HTH family regulatory protein
PMPDDMJF_00867 6.2e-266 lmrB EGP Major facilitator Superfamily
PMPDDMJF_00868 5.2e-109 S Domain of unknown function (DUF4811)
PMPDDMJF_00869 2.4e-119 3.6.1.27 I Acid phosphatase homologues
PMPDDMJF_00870 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMPDDMJF_00871 2.2e-280 ytgP S Polysaccharide biosynthesis protein
PMPDDMJF_00872 2.2e-128 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PMPDDMJF_00873 4e-33 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
PMPDDMJF_00874 4.8e-143 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PMPDDMJF_00875 2.8e-93 FNV0100 F NUDIX domain
PMPDDMJF_00877 1.5e-288 tagE2 2.4.1.52 GT4 M Glycosyl transferases group 1
PMPDDMJF_00878 9.3e-305 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
PMPDDMJF_00879 3.7e-87 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PMPDDMJF_00882 3.9e-234 malY 4.4.1.8 E Aminotransferase, class I
PMPDDMJF_00883 2.5e-258 cpdA S Calcineurin-like phosphoesterase
PMPDDMJF_00884 1e-38 gcvR T Belongs to the UPF0237 family
PMPDDMJF_00885 2.1e-244 XK27_08635 S UPF0210 protein
PMPDDMJF_00886 4.3e-213 coiA 3.6.4.12 S Competence protein
PMPDDMJF_00887 2.3e-113 yjbH Q Thioredoxin
PMPDDMJF_00888 7.5e-106 yjbK S CYTH
PMPDDMJF_00889 1.3e-122 yjbM 2.7.6.5 S RelA SpoT domain protein
PMPDDMJF_00890 4.6e-151 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PMPDDMJF_00891 1.1e-169 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PMPDDMJF_00892 4.1e-203 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMPDDMJF_00893 1.5e-112 cutC P Participates in the control of copper homeostasis
PMPDDMJF_00894 2.1e-143 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PMPDDMJF_00895 4.6e-199 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PMPDDMJF_00896 2.5e-62 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PMPDDMJF_00897 3.5e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMPDDMJF_00898 5.7e-191 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMPDDMJF_00899 5.7e-172 corA P CorA-like Mg2+ transporter protein
PMPDDMJF_00900 9.6e-155 rrmA 2.1.1.187 H Methyltransferase
PMPDDMJF_00901 9.4e-97 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PMPDDMJF_00902 8.4e-72 WQ51_03320 S Protein of unknown function (DUF1149)
PMPDDMJF_00903 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PMPDDMJF_00904 9.4e-231 ymfF S Peptidase M16 inactive domain protein
PMPDDMJF_00905 3.4e-244 ymfH S Peptidase M16
PMPDDMJF_00906 2e-129 IQ Enoyl-(Acyl carrier protein) reductase
PMPDDMJF_00907 1.3e-109 ymfM S Helix-turn-helix domain
PMPDDMJF_00908 1.4e-104 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PMPDDMJF_00909 0.0 yknV V ABC transporter
PMPDDMJF_00910 1.3e-222 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PMPDDMJF_00911 1.9e-231 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PMPDDMJF_00912 3.1e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
PMPDDMJF_00913 7.8e-48 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PMPDDMJF_00914 1.3e-20
PMPDDMJF_00915 1.5e-259 arpJ P ABC transporter permease
PMPDDMJF_00916 1.8e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMPDDMJF_00917 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PMPDDMJF_00918 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PMPDDMJF_00919 6.7e-170 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PMPDDMJF_00920 6.6e-131 fruR K DeoR C terminal sensor domain
PMPDDMJF_00921 3.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PMPDDMJF_00922 0.0 oatA I Acyltransferase
PMPDDMJF_00923 8.6e-184 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PMPDDMJF_00924 1e-142 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PMPDDMJF_00925 4.1e-48 yrvD S Lipopolysaccharide assembly protein A domain
PMPDDMJF_00926 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PMPDDMJF_00927 3.5e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PMPDDMJF_00928 2.8e-94 M1-874 K Domain of unknown function (DUF1836)
PMPDDMJF_00929 4.7e-301 cpdB 3.1.3.6, 3.1.4.16 F 5'-nucleotidase, C-terminal domain
PMPDDMJF_00930 2.4e-135
PMPDDMJF_00931 2.5e-18 S Protein of unknown function (DUF2929)
PMPDDMJF_00932 0.0 dnaE 2.7.7.7 L DNA polymerase
PMPDDMJF_00933 7e-178 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PMPDDMJF_00934 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PMPDDMJF_00935 1.5e-72 yeaL S Protein of unknown function (DUF441)
PMPDDMJF_00936 4.9e-162 cvfB S S1 domain
PMPDDMJF_00937 4.8e-165 xerD D recombinase XerD
PMPDDMJF_00938 2e-67 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PMPDDMJF_00939 1.2e-124 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PMPDDMJF_00940 5.5e-107 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PMPDDMJF_00941 6.7e-136 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PMPDDMJF_00942 2.6e-95 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PMPDDMJF_00943 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PMPDDMJF_00944 6.8e-69 2.7.1.191 G PTS system fructose IIA component
PMPDDMJF_00945 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PMPDDMJF_00946 2.4e-153 G PTS system mannose/fructose/sorbose family IID component
PMPDDMJF_00947 2.8e-127 G PTS system sorbose-specific iic component
PMPDDMJF_00948 3e-84 2.7.1.191 G PTS system sorbose subfamily IIB component
PMPDDMJF_00949 3.1e-184 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PMPDDMJF_00950 1.9e-43 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PMPDDMJF_00951 1.7e-151 S hydrolase
PMPDDMJF_00952 1e-262 npr 1.11.1.1 C NADH oxidase
PMPDDMJF_00953 5.3e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PMPDDMJF_00954 1.5e-184 hrtB V ABC transporter permease
PMPDDMJF_00955 1.6e-85 ygfC K Bacterial regulatory proteins, tetR family
PMPDDMJF_00956 3.8e-113 3.2.1.17 M hydrolase, family 25
PMPDDMJF_00957 8.1e-12 S YvrJ protein family
PMPDDMJF_00959 1.4e-237 kgtP EGP Sugar (and other) transporter
PMPDDMJF_00960 1.6e-115 P Binding-protein-dependent transport system inner membrane component
PMPDDMJF_00961 2.9e-114 P Binding-protein-dependent transport system inner membrane component
PMPDDMJF_00962 5.1e-159 ET Bacterial periplasmic substrate-binding proteins
PMPDDMJF_00963 1.4e-128 E ABC transporter
PMPDDMJF_00964 4.6e-191 odh 1.5.1.28 C NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
PMPDDMJF_00965 2.9e-218 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PMPDDMJF_00966 0.0 mtlF 2.7.1.197 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMPDDMJF_00967 6.7e-96 hxlB 4.1.2.43, 5.3.1.27 M SIS domain
PMPDDMJF_00968 7.7e-112 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
PMPDDMJF_00969 1.3e-134 fruR K DeoR C terminal sensor domain
PMPDDMJF_00970 1.4e-121 S Haloacid dehalogenase-like hydrolase
PMPDDMJF_00972 1e-271 G Glycosyl hydrolases family 32
PMPDDMJF_00973 1.2e-55
PMPDDMJF_00974 1.9e-147 levD G PTS system mannose/fructose/sorbose family IID component
PMPDDMJF_00975 1.6e-152 M PTS system sorbose-specific iic component
PMPDDMJF_00976 4.8e-90 2.7.1.191 G PTS system sorbose subfamily IIB component
PMPDDMJF_00977 5.3e-72 levA G PTS system fructose IIA component
PMPDDMJF_00978 0.0 K Sigma-54 interaction domain
PMPDDMJF_00980 8.8e-27
PMPDDMJF_00981 7.5e-311 md2 V ABC transporter
PMPDDMJF_00982 1.6e-302 yfiB V ABC transporter transmembrane region
PMPDDMJF_00984 0.0 pip V domain protein
PMPDDMJF_00985 2.6e-155 metQ_4 P Belongs to the nlpA lipoprotein family
PMPDDMJF_00986 1.3e-198 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PMPDDMJF_00987 7.9e-84
PMPDDMJF_00988 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
PMPDDMJF_00989 1.7e-15
PMPDDMJF_00990 1.5e-100 K Bacterial regulatory proteins, tetR family
PMPDDMJF_00991 7.3e-59 dhaM 2.7.1.121 S PTS system fructose IIA component
PMPDDMJF_00992 5e-102 dhaL 2.7.1.121 S Dak2
PMPDDMJF_00993 1.4e-189 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PMPDDMJF_00994 1.1e-74 ohr O OsmC-like protein
PMPDDMJF_00996 7.1e-53
PMPDDMJF_00997 8.5e-265 L Exonuclease
PMPDDMJF_00998 3.6e-48 K Helix-turn-helix domain
PMPDDMJF_00999 4.5e-203 yceJ EGP Major facilitator Superfamily
PMPDDMJF_01000 2.4e-107 K Transcriptional
PMPDDMJF_01001 9.6e-106 tag 3.2.2.20 L glycosylase
PMPDDMJF_01002 1e-167 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PMPDDMJF_01003 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMPDDMJF_01004 1.3e-195 V Beta-lactamase
PMPDDMJF_01005 1.9e-144 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PMPDDMJF_01006 1.3e-19 H Protein of unknown function (DUF1698)
PMPDDMJF_01007 1.2e-94 H Protein of unknown function (DUF1698)
PMPDDMJF_01008 5.7e-143 puuD S peptidase C26
PMPDDMJF_01009 1.2e-255 6.3.1.2 E Glutamine synthetase, catalytic domain
PMPDDMJF_01010 2.1e-221 S Amidohydrolase
PMPDDMJF_01011 5.3e-248 E Amino acid permease
PMPDDMJF_01012 6.5e-75 K helix_turn_helix, mercury resistance
PMPDDMJF_01013 1.5e-163 morA2 S reductase
PMPDDMJF_01014 4.5e-199 qor 1.1.1.1, 1.6.5.5 C Zinc-binding dehydrogenase
PMPDDMJF_01015 8.4e-57 hxlR K HxlR-like helix-turn-helix
PMPDDMJF_01016 1.2e-120 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
PMPDDMJF_01017 1.7e-145 S Alpha/beta hydrolase of unknown function (DUF915)
PMPDDMJF_01018 7e-164 cylA V ABC transporter
PMPDDMJF_01019 1.2e-147 cylB V ABC-2 type transporter
PMPDDMJF_01020 1.7e-73 K LytTr DNA-binding domain
PMPDDMJF_01021 9.6e-44 S Protein of unknown function (DUF3021)
PMPDDMJF_01022 0.0 yjcE P Sodium proton antiporter
PMPDDMJF_01023 2.1e-241 S Protein of unknown function (DUF3800)
PMPDDMJF_01024 4.8e-249 yifK E Amino acid permease
PMPDDMJF_01025 1.7e-156 yeaE S Aldo/keto reductase family
PMPDDMJF_01026 5.1e-113 ylbE GM NAD(P)H-binding
PMPDDMJF_01027 1.9e-278 lsa S ABC transporter
PMPDDMJF_01028 1.6e-76 O OsmC-like protein
PMPDDMJF_01029 3e-67
PMPDDMJF_01030 4.6e-31 K 'Cold-shock' DNA-binding domain
PMPDDMJF_01031 4.6e-252 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PMPDDMJF_01032 3e-173 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PMPDDMJF_01033 5.6e-267 yfnA E Amino Acid
PMPDDMJF_01034 3.6e-217 sstT U Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PMPDDMJF_01035 0.0 treB 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PMPDDMJF_01036 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PMPDDMJF_01037 7.7e-129 treR K UTRA
PMPDDMJF_01038 6e-222 oxlT P Major Facilitator Superfamily
PMPDDMJF_01039 0.0 V ABC transporter
PMPDDMJF_01040 0.0 XK27_09600 V ABC transporter, ATP-binding protein
PMPDDMJF_01041 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PMPDDMJF_01042 1.6e-165 metF 1.5.1.20 C Methylenetetrahydrofolate reductase
PMPDDMJF_01044 1.4e-121
PMPDDMJF_01045 4.1e-259 wcaJ M Bacterial sugar transferase
PMPDDMJF_01046 4.6e-174 cps2D 5.1.3.2 M RmlD substrate binding domain
PMPDDMJF_01047 7.4e-110 glnP P ABC transporter permease
PMPDDMJF_01048 4.6e-109 gluC P ABC transporter permease
PMPDDMJF_01049 3.8e-148 glnH ET ABC transporter substrate-binding protein
PMPDDMJF_01050 7.4e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMPDDMJF_01051 1.1e-173
PMPDDMJF_01053 6.1e-84 zur P Belongs to the Fur family
PMPDDMJF_01054 6.3e-09
PMPDDMJF_01055 1e-110 gmk2 2.7.4.8 F Guanylate kinase
PMPDDMJF_01056 1.9e-68 GnaT 2.5.1.16 K Acetyltransferase (GNAT) domain
PMPDDMJF_01057 1.6e-126 spl M NlpC/P60 family
PMPDDMJF_01058 2.6e-244 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PMPDDMJF_01059 3.3e-172 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PMPDDMJF_01060 1e-54 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
PMPDDMJF_01061 1.3e-173 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMPDDMJF_01062 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
PMPDDMJF_01063 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PMPDDMJF_01064 8.9e-286 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
PMPDDMJF_01065 3.6e-200 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
PMPDDMJF_01066 3.6e-197 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PMPDDMJF_01067 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PMPDDMJF_01068 1.4e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PMPDDMJF_01069 1.6e-99 ylcC 3.4.22.70 M Sortase family
PMPDDMJF_01070 1.8e-145 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMPDDMJF_01071 0.0 fbp 3.1.3.11 G phosphatase activity
PMPDDMJF_01072 1.6e-151 S AAA-like domain
PMPDDMJF_01073 9.8e-49 S SIR2-like domain
PMPDDMJF_01074 6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PMPDDMJF_01075 3e-178 coaA 2.7.1.33 F Pantothenic acid kinase
PMPDDMJF_01076 3.9e-12
PMPDDMJF_01077 8.7e-23
PMPDDMJF_01078 1.4e-275 pipD E Dipeptidase
PMPDDMJF_01079 8.5e-84 ykhA 3.1.2.20 I Thioesterase superfamily
PMPDDMJF_01080 0.0 helD 3.6.4.12 L DNA helicase
PMPDDMJF_01081 7.1e-21
PMPDDMJF_01082 0.0 yjbQ P TrkA C-terminal domain protein
PMPDDMJF_01083 1.1e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PMPDDMJF_01084 8e-79 yjhE S Phage tail protein
PMPDDMJF_01085 4.1e-240 mntH P H( )-stimulated, divalent metal cation uptake system
PMPDDMJF_01086 4.4e-188 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PMPDDMJF_01087 2.3e-127 pgm3 G Phosphoglycerate mutase family
PMPDDMJF_01088 0.0 V FtsX-like permease family
PMPDDMJF_01089 2.6e-135 cysA V ABC transporter, ATP-binding protein
PMPDDMJF_01090 0.0 E amino acid
PMPDDMJF_01091 3.4e-163 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
PMPDDMJF_01092 2.4e-237 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PMPDDMJF_01093 9e-152 nodB3 G Polysaccharide deacetylase
PMPDDMJF_01094 2.9e-274 S Glucosyl transferase GtrII
PMPDDMJF_01095 8e-223
PMPDDMJF_01096 1.3e-93
PMPDDMJF_01097 3.4e-173 3.1.4.46 M Peptidase_C39 like family
PMPDDMJF_01098 4.5e-117 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PMPDDMJF_01099 1.3e-44 XK27_02675 K Acetyltransferase (GNAT) domain
PMPDDMJF_01100 1.2e-48
PMPDDMJF_01101 8.2e-19
PMPDDMJF_01102 3.8e-66 S Protein of unknown function (DUF1093)
PMPDDMJF_01103 5.3e-37
PMPDDMJF_01104 6.2e-111 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PMPDDMJF_01105 2.9e-87 XK27_03960 S Protein of unknown function (DUF3013)
PMPDDMJF_01106 1.1e-172 prmA J Ribosomal protein L11 methyltransferase
PMPDDMJF_01107 5.9e-132 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PMPDDMJF_01108 1.3e-43
PMPDDMJF_01109 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PMPDDMJF_01110 1.2e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PMPDDMJF_01111 2.6e-117 3.1.3.18 J HAD-hyrolase-like
PMPDDMJF_01112 5.9e-244 lytH 3.5.1.28, 6.1.1.12 M N-acetylmuramoyl-L-alanine amidase
PMPDDMJF_01113 2.5e-73 FG adenosine 5'-monophosphoramidase activity
PMPDDMJF_01114 6.9e-156 V ABC transporter
PMPDDMJF_01115 5.8e-280
PMPDDMJF_01116 8.4e-131 K Helix-turn-helix
PMPDDMJF_01117 2.1e-76
PMPDDMJF_01118 4.1e-167 1.6.5.5 C nadph quinone reductase
PMPDDMJF_01119 1.7e-35 XK27_04345 3.6.1.1 C Inorganic pyrophosphatase
PMPDDMJF_01120 2.6e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PMPDDMJF_01121 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PMPDDMJF_01122 2.6e-82 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PMPDDMJF_01123 7.4e-169 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMPDDMJF_01124 1.3e-162 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PMPDDMJF_01125 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PMPDDMJF_01126 2.9e-21 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PMPDDMJF_01127 6.1e-68 yqeY S YqeY-like protein
PMPDDMJF_01129 2.9e-179 phoH T phosphate starvation-inducible protein PhoH
PMPDDMJF_01130 2e-82 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PMPDDMJF_01131 3.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PMPDDMJF_01132 8e-64 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PMPDDMJF_01133 9.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PMPDDMJF_01134 3.3e-141 recO L Involved in DNA repair and RecF pathway recombination
PMPDDMJF_01135 2.3e-53
PMPDDMJF_01136 3.2e-55
PMPDDMJF_01137 2.4e-12
PMPDDMJF_01139 9.3e-139 gntP EG Gluconate
PMPDDMJF_01140 2.4e-248 S O-antigen ligase like membrane protein
PMPDDMJF_01141 1.2e-151 S Glycosyl transferase family 2
PMPDDMJF_01142 8e-115 welB S Glycosyltransferase like family 2
PMPDDMJF_01143 8.8e-159 S Glycosyltransferase like family 2
PMPDDMJF_01144 3.9e-147 M Glycosyltransferase sugar-binding region containing DXD motif
PMPDDMJF_01145 0.0 M Glycosyl hydrolases family 25
PMPDDMJF_01146 5.4e-259 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PMPDDMJF_01147 1.4e-161 S Glycosyltransferase like family 2
PMPDDMJF_01148 1.1e-197 S Protein conserved in bacteria
PMPDDMJF_01149 7.6e-58
PMPDDMJF_01150 2.2e-128 fhuC 3.6.3.35 P ABC transporter
PMPDDMJF_01151 3.3e-133 znuB U ABC 3 transport family
PMPDDMJF_01152 4.2e-166 T Calcineurin-like phosphoesterase superfamily domain
PMPDDMJF_01153 7.1e-161 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PMPDDMJF_01154 0.0 pepF E oligoendopeptidase F
PMPDDMJF_01155 7.4e-200 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMPDDMJF_01156 2.9e-249 brnQ U Component of the transport system for branched-chain amino acids
PMPDDMJF_01157 7e-71 T Sh3 type 3 domain protein
PMPDDMJF_01158 2.4e-133 glcR K DeoR C terminal sensor domain
PMPDDMJF_01159 2e-146 M Glycosyltransferase like family 2
PMPDDMJF_01160 3.3e-135 XK27_06755 S Protein of unknown function (DUF975)
PMPDDMJF_01161 1.4e-40
PMPDDMJF_01162 2.4e-107 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PMPDDMJF_01163 6e-174 draG O ADP-ribosylglycohydrolase
PMPDDMJF_01164 1.6e-293 S ABC transporter
PMPDDMJF_01165 1.6e-134 Q Methyltransferase domain
PMPDDMJF_01166 5.4e-53 trxC O Belongs to the thioredoxin family
PMPDDMJF_01167 6.3e-137 thrE S Putative threonine/serine exporter
PMPDDMJF_01168 1.4e-75 S Threonine/Serine exporter, ThrE
PMPDDMJF_01169 1.4e-35 livJ E Receptor family ligand binding region
PMPDDMJF_01170 7.3e-141 livJ E Receptor family ligand binding region
PMPDDMJF_01171 6.9e-148 livH U Branched-chain amino acid transport system / permease component
PMPDDMJF_01172 4.6e-121 livM E Branched-chain amino acid transport system / permease component
PMPDDMJF_01173 8.1e-140 livG E Branched-chain amino acid ATP-binding cassette transporter
PMPDDMJF_01174 1.2e-11 livF E ABC transporter
PMPDDMJF_01175 2.3e-69 livF E ABC transporter
PMPDDMJF_01176 3.9e-67 ydeA S DJ-1/PfpI family
PMPDDMJF_01177 1.1e-22 mutT 3.6.1.55 F GDP-mannose mannosyl hydrolase activity
PMPDDMJF_01178 1.2e-39 yvdC S MazG nucleotide pyrophosphohydrolase domain
PMPDDMJF_01179 3.1e-167 S Alpha/beta hydrolase of unknown function (DUF915)
PMPDDMJF_01180 4.2e-234 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMPDDMJF_01181 7.6e-118 XK27_12570 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PMPDDMJF_01182 8.2e-117 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PMPDDMJF_01183 6.8e-231 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PMPDDMJF_01184 3.4e-129 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
PMPDDMJF_01185 3.6e-152 M NlpC P60 family protein
PMPDDMJF_01188 1.4e-259 nox 1.6.3.4 C NADH oxidase
PMPDDMJF_01189 2.9e-89 sepS16B
PMPDDMJF_01190 8.1e-120
PMPDDMJF_01191 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
PMPDDMJF_01192 6e-241 G Bacterial extracellular solute-binding protein
PMPDDMJF_01193 6e-86
PMPDDMJF_01194 0.0 strH 3.2.1.52 GH20 G Gram-positive signal peptide protein, YSIRK family
PMPDDMJF_01195 4.3e-194 manA 5.3.1.8 G mannose-6-phosphate isomerase
PMPDDMJF_01197 1e-90 sip L Phage integrase family
PMPDDMJF_01198 4.2e-89 sip L Phage integrase family
PMPDDMJF_01199 2e-171 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PMPDDMJF_01200 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PMPDDMJF_01201 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PMPDDMJF_01202 3.4e-188 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PMPDDMJF_01203 3e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
PMPDDMJF_01204 6e-151 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PMPDDMJF_01205 3.5e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PMPDDMJF_01206 8.2e-60 yitW S Iron-sulfur cluster assembly protein
PMPDDMJF_01207 1.1e-141
PMPDDMJF_01208 9.4e-175
PMPDDMJF_01209 2.6e-263 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PMPDDMJF_01210 1.1e-192 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PMPDDMJF_01211 1.3e-179 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PMPDDMJF_01212 1.4e-167 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PMPDDMJF_01213 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PMPDDMJF_01214 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PMPDDMJF_01215 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PMPDDMJF_01216 1.4e-11 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PMPDDMJF_01217 7.1e-86 ypmB S Protein conserved in bacteria
PMPDDMJF_01218 2.2e-218 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PMPDDMJF_01219 3.2e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PMPDDMJF_01220 6.7e-113 dnaD L DnaD domain protein
PMPDDMJF_01221 3e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PMPDDMJF_01222 4.4e-85 comEB 3.5.4.12 F ComE operon protein 2
PMPDDMJF_01223 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PMPDDMJF_01224 5.1e-121 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PMPDDMJF_01225 1.3e-107 ypsA S Belongs to the UPF0398 family
PMPDDMJF_01226 2.3e-66 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PMPDDMJF_01227 8.2e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PMPDDMJF_01228 1e-173 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PMPDDMJF_01229 1.9e-33
PMPDDMJF_01230 9.6e-194 lplA 6.3.1.20 H Lipoate-protein ligase
PMPDDMJF_01231 0.0 pepO 3.4.24.71 O Peptidase family M13
PMPDDMJF_01232 7.1e-161 K Transcriptional regulator
PMPDDMJF_01233 2.4e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMPDDMJF_01234 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMPDDMJF_01235 2e-38 nrdH O Glutaredoxin
PMPDDMJF_01236 9.3e-275 S Mga helix-turn-helix domain
PMPDDMJF_01237 1.4e-48
PMPDDMJF_01238 2.6e-280 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMPDDMJF_01239 1.9e-109 XK27_02070 S Nitroreductase family
PMPDDMJF_01240 6.5e-69 rnhA 3.1.26.4 L Ribonuclease HI
PMPDDMJF_01241 1.3e-45 S Family of unknown function (DUF5322)
PMPDDMJF_01242 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PMPDDMJF_01243 2.1e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PMPDDMJF_01244 5e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMPDDMJF_01245 1.7e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMPDDMJF_01246 5.9e-236 pyrP F Permease
PMPDDMJF_01247 1.6e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PMPDDMJF_01248 2.8e-235 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PMPDDMJF_01249 1.5e-208 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PMPDDMJF_01250 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PMPDDMJF_01251 6.9e-156 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PMPDDMJF_01252 1.4e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PMPDDMJF_01253 8.1e-114 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PMPDDMJF_01254 5.1e-148 pta 2.3.1.19, 2.3.1.8 C Phosphate acetyl/butaryl transferase
PMPDDMJF_01255 2.4e-201 buk 2.7.2.7 C Acetokinase family
PMPDDMJF_01256 1.4e-259 lpdA 1.8.1.4 C 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
PMPDDMJF_01257 6.6e-187 bfmBAA 1.2.4.4 C Dehydrogenase E1 component
PMPDDMJF_01258 3.7e-182 bfmBAB 1.2.4.1, 1.2.4.4 C Transketolase, pyrimidine binding domain
PMPDDMJF_01259 1.9e-205 bfmBB 2.3.1.168, 2.3.1.61 C 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
PMPDDMJF_01260 2.4e-178 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PMPDDMJF_01261 3.4e-195 pfoS S Phosphotransferase system, EIIC
PMPDDMJF_01262 1.5e-49 S MazG-like family
PMPDDMJF_01263 0.0 FbpA K Fibronectin-binding protein
PMPDDMJF_01264 5.9e-160 degV S EDD domain protein, DegV family
PMPDDMJF_01265 4.5e-100 3.6.1.13 L Belongs to the Nudix hydrolase family
PMPDDMJF_01266 2e-205 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PMPDDMJF_01267 1.4e-217 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PMPDDMJF_01268 1.9e-110 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PMPDDMJF_01269 2.8e-230 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PMPDDMJF_01270 7e-104 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PMPDDMJF_01271 2e-112 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PMPDDMJF_01272 2.8e-123 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PMPDDMJF_01273 2.3e-131 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PMPDDMJF_01274 5.6e-58 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PMPDDMJF_01275 1.6e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PMPDDMJF_01276 1e-201 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PMPDDMJF_01277 3.7e-111 nfnB 1.5.1.34 C Nitroreductase family
PMPDDMJF_01278 2.4e-62 K Acetyltransferase (GNAT) domain
PMPDDMJF_01279 5.3e-47 msi198 K Acetyltransferase (GNAT) domain
PMPDDMJF_01280 6.8e-190 EGP Transmembrane secretion effector
PMPDDMJF_01281 1.4e-122 T Transcriptional regulatory protein, C terminal
PMPDDMJF_01282 2.3e-173 T PhoQ Sensor
PMPDDMJF_01283 6.3e-137 XK27_05695 V ABC transporter, ATP-binding protein
PMPDDMJF_01284 0.0 ysaB V FtsX-like permease family
PMPDDMJF_01285 8.1e-39
PMPDDMJF_01286 1.1e-209 xerS L Belongs to the 'phage' integrase family
PMPDDMJF_01287 1.8e-170 ppaC 3.6.1.1 C inorganic pyrophosphatase
PMPDDMJF_01288 3.4e-180 K LysR substrate binding domain
PMPDDMJF_01289 5.6e-171 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMPDDMJF_01290 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PMPDDMJF_01291 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMPDDMJF_01292 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMPDDMJF_01293 1.7e-108 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PMPDDMJF_01294 1.8e-172 lacX 5.1.3.3 G Aldose 1-epimerase
PMPDDMJF_01295 1.2e-258 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PMPDDMJF_01296 7.2e-92 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PMPDDMJF_01297 2.1e-168 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PMPDDMJF_01298 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PMPDDMJF_01299 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PMPDDMJF_01300 1.9e-144 dprA LU DNA protecting protein DprA
PMPDDMJF_01301 1.1e-138 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMPDDMJF_01302 1.9e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PMPDDMJF_01303 4.5e-49 K Helix-turn-helix domain
PMPDDMJF_01304 9.3e-240 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PMPDDMJF_01305 1.1e-39 yozE S Belongs to the UPF0346 family
PMPDDMJF_01306 3.5e-91 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMPDDMJF_01307 1.2e-112 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PMPDDMJF_01308 4.5e-152 ypmR E GDSL-like Lipase/Acylhydrolase
PMPDDMJF_01309 1.5e-145 DegV S EDD domain protein, DegV family
PMPDDMJF_01310 2.1e-114 hly S protein, hemolysin III
PMPDDMJF_01311 2.2e-90 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PMPDDMJF_01312 2.1e-190 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PMPDDMJF_01313 0.0 yfmR S ABC transporter, ATP-binding protein
PMPDDMJF_01314 1.3e-84
PMPDDMJF_01315 3.4e-222 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PMPDDMJF_01316 2.6e-147 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMPDDMJF_01317 2.3e-237 S Tetratricopeptide repeat protein
PMPDDMJF_01318 1.1e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PMPDDMJF_01319 1e-243 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PMPDDMJF_01320 2.1e-225 rpsA 1.17.7.4 J Ribosomal protein S1
PMPDDMJF_01321 2e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PMPDDMJF_01322 6.1e-66 M Lysin motif
PMPDDMJF_01323 3.2e-264 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
PMPDDMJF_01324 5.3e-181 ypbB 5.1.3.1 S Helix-turn-helix domain
PMPDDMJF_01325 2.7e-44 fer C 4Fe-4S single cluster domain of Ferredoxin I
PMPDDMJF_01326 7.6e-177 sitA P Belongs to the bacterial solute-binding protein 9 family
PMPDDMJF_01327 3.6e-144 mtsB U ABC 3 transport family
PMPDDMJF_01328 2.2e-131 mntB 3.6.3.35 P AAA domain, putative AbiEii toxin, Type IV TA system
PMPDDMJF_01329 1.1e-275 aldA 1.2.1.21, 1.2.1.22 C Belongs to the aldehyde dehydrogenase family
PMPDDMJF_01330 3e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMPDDMJF_01331 5.9e-166 znuA P Belongs to the bacterial solute-binding protein 9 family
PMPDDMJF_01332 1.6e-117 GM NmrA-like family
PMPDDMJF_01333 8.3e-111 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
PMPDDMJF_01334 2.6e-70
PMPDDMJF_01335 2.4e-253 M domain protein
PMPDDMJF_01336 5.4e-164 znuA P Belongs to the bacterial solute-binding protein 9 family
PMPDDMJF_01337 6.1e-20
PMPDDMJF_01338 3e-60
PMPDDMJF_01341 1.9e-51 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMPDDMJF_01342 8.7e-69 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMPDDMJF_01344 2.3e-157 phnD P Phosphonate ABC transporter
PMPDDMJF_01345 7.5e-138 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PMPDDMJF_01346 1.7e-134 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PMPDDMJF_01347 1.3e-145 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PMPDDMJF_01348 1.8e-173 ssuA P NMT1-like family
PMPDDMJF_01349 6.8e-292 6.2.1.3, 6.2.1.8 IQ AMP-binding enzyme C-terminal domain
PMPDDMJF_01350 1.1e-167 yfiQ I Acyltransferase family
PMPDDMJF_01351 1.2e-115 ssuB P ATPases associated with a variety of cellular activities
PMPDDMJF_01352 1.2e-61 ssuC U Binding-protein-dependent transport system inner membrane component
PMPDDMJF_01353 4.9e-66 ssuC U Binding-protein-dependent transport system inner membrane component
PMPDDMJF_01354 1.2e-121 S ABC-2 family transporter protein
PMPDDMJF_01355 2.5e-200 gldA 1.1.1.1, 1.1.1.6 C dehydrogenase
PMPDDMJF_01356 1.1e-225 amd 3.5.1.47 E Peptidase family M20/M25/M40
PMPDDMJF_01357 3.8e-79 S Threonine/Serine exporter, ThrE
PMPDDMJF_01358 2.2e-134 thrE S Putative threonine/serine exporter
PMPDDMJF_01360 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PMPDDMJF_01361 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PMPDDMJF_01363 8.2e-129 jag S R3H domain protein
PMPDDMJF_01364 2.6e-136 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMPDDMJF_01365 6.1e-59 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PMPDDMJF_01366 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PMPDDMJF_01367 1.2e-252 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PMPDDMJF_01368 5.2e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PMPDDMJF_01369 1.7e-31 yaaA S S4 domain protein YaaA
PMPDDMJF_01370 1.2e-202 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PMPDDMJF_01371 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMPDDMJF_01372 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMPDDMJF_01373 1.5e-124 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PMPDDMJF_01374 8.5e-75 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PMPDDMJF_01375 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PMPDDMJF_01376 3.9e-62 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PMPDDMJF_01377 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PMPDDMJF_01378 4.7e-282 cydA 1.10.3.14 C Cytochrome bd terminal oxidase subunit I
PMPDDMJF_01379 3.9e-179 cydB 1.10.3.14 C Cytochrome bd terminal oxidase subunit II
PMPDDMJF_01380 2.4e-13
PMPDDMJF_01381 4.9e-43 O Belongs to the peptidase S8 family
PMPDDMJF_01382 1.5e-143 O Belongs to the peptidase S8 family
PMPDDMJF_01383 0.0 O Belongs to the peptidase S8 family
PMPDDMJF_01384 0.0 pepN 3.4.11.2 E aminopeptidase
PMPDDMJF_01385 7.1e-275 ycaM E amino acid
PMPDDMJF_01386 5.3e-76 S Protein of unknown function (DUF1440)
PMPDDMJF_01387 4.8e-165 K Transcriptional regulator, LysR family
PMPDDMJF_01388 3e-159 G Xylose isomerase-like TIM barrel
PMPDDMJF_01389 1.7e-140 IQ Enoyl-(Acyl carrier protein) reductase
PMPDDMJF_01390 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PMPDDMJF_01391 2.9e-213 ydiN EGP Major Facilitator Superfamily
PMPDDMJF_01392 2.1e-168 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PMPDDMJF_01393 4.4e-157 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PMPDDMJF_01394 4.6e-174 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PMPDDMJF_01395 5.8e-28
PMPDDMJF_01397 6.7e-223 L Belongs to the 'phage' integrase family
PMPDDMJF_01398 2.2e-09
PMPDDMJF_01400 1.1e-62 yugI 5.3.1.9 J general stress protein
PMPDDMJF_01401 2.5e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PMPDDMJF_01402 7.9e-185 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PMPDDMJF_01403 6.7e-87 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
PMPDDMJF_01404 5.2e-116 dedA S SNARE-like domain protein
PMPDDMJF_01405 1.1e-112 S Protein of unknown function (DUF1461)
PMPDDMJF_01406 2.8e-145 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PMPDDMJF_01407 6e-117 yutD S Protein of unknown function (DUF1027)
PMPDDMJF_01408 2.8e-265 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PMPDDMJF_01409 1.8e-115 S Calcineurin-like phosphoesterase
PMPDDMJF_01410 1.4e-114 yibF S overlaps another CDS with the same product name
PMPDDMJF_01411 9.8e-189 yibE S overlaps another CDS with the same product name
PMPDDMJF_01412 6.1e-54
PMPDDMJF_01413 1.1e-258 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PMPDDMJF_01414 3.8e-273 pepV 3.5.1.18 E dipeptidase PepV
PMPDDMJF_01415 9.5e-138 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PMPDDMJF_01416 1.1e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S HAD-hyrolase-like
PMPDDMJF_01417 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
PMPDDMJF_01418 5.1e-179 ccpA K catabolite control protein A
PMPDDMJF_01419 6.3e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PMPDDMJF_01420 3e-90 niaR S 3H domain
PMPDDMJF_01421 2.7e-86 ytxH S YtxH-like protein
PMPDDMJF_01422 6e-12 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PMPDDMJF_01423 2.1e-152 ykuT M mechanosensitive ion channel
PMPDDMJF_01424 3.5e-155 XK27_00890 S Domain of unknown function (DUF368)
PMPDDMJF_01425 5.9e-149 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PMPDDMJF_01426 1.3e-88 S ECF-type riboflavin transporter, S component
PMPDDMJF_01427 2.9e-145 CcmA5 V ABC transporter
PMPDDMJF_01428 0.0
PMPDDMJF_01429 4.6e-177 yicL EG EamA-like transporter family
PMPDDMJF_01430 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
PMPDDMJF_01431 5.1e-101 N WxL domain surface cell wall-binding
PMPDDMJF_01432 1.8e-57
PMPDDMJF_01433 1.1e-111 S WxL domain surface cell wall-binding
PMPDDMJF_01434 4.4e-198 XK27_00720 S Leucine-rich repeat (LRR) protein
PMPDDMJF_01435 1.5e-38
PMPDDMJF_01436 4e-171 S Cell surface protein
PMPDDMJF_01437 2.2e-117 S WxL domain surface cell wall-binding
PMPDDMJF_01438 4.8e-252 brnQ U Component of the transport system for branched-chain amino acids
PMPDDMJF_01439 7.2e-31
PMPDDMJF_01440 5.3e-122 tcyB E ABC transporter
PMPDDMJF_01441 3.9e-145 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PMPDDMJF_01442 5.1e-212 metC 4.4.1.8 E cystathionine
PMPDDMJF_01443 7.3e-183 CP_0155 3.5.1.28 M Glycosyl hydrolases family 25
PMPDDMJF_01444 1.2e-152 licT K CAT RNA binding domain
PMPDDMJF_01445 2e-289 cydC V ABC transporter transmembrane region
PMPDDMJF_01446 6.5e-87 cydD CO ABC transporter transmembrane region
PMPDDMJF_01447 1.5e-217 cydD CO ABC transporter transmembrane region
PMPDDMJF_01448 1.2e-73 S NusG domain II
PMPDDMJF_01449 1e-156 M Peptidoglycan-binding domain 1 protein
PMPDDMJF_01450 4.3e-141
PMPDDMJF_01451 1.5e-214 ywhK S Membrane
PMPDDMJF_01452 7.1e-62 S Protein of unknown function (DUF1093)
PMPDDMJF_01453 7.1e-50 yvlA
PMPDDMJF_01454 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PMPDDMJF_01455 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PMPDDMJF_01456 1.3e-182 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PMPDDMJF_01457 6.8e-278 cydA 1.10.3.14 C ubiquinol oxidase
PMPDDMJF_01459 3.1e-237 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
PMPDDMJF_01460 1.4e-189 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PMPDDMJF_01461 8.6e-40
PMPDDMJF_01462 1.4e-86
PMPDDMJF_01463 8e-24
PMPDDMJF_01464 5e-165 yicL EG EamA-like transporter family
PMPDDMJF_01465 3.3e-112 tag 3.2.2.20 L glycosylase
PMPDDMJF_01466 5e-78 usp5 T universal stress protein
PMPDDMJF_01467 3.2e-96
PMPDDMJF_01468 5.5e-288 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMPDDMJF_01469 4e-57 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PMPDDMJF_01470 4.5e-208 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMPDDMJF_01471 2.6e-49 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PMPDDMJF_01472 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 GKT Mga helix-turn-helix domain
PMPDDMJF_01473 7e-104 L Resolvase, N terminal domain
PMPDDMJF_01474 0.0 yvcC M Cna protein B-type domain
PMPDDMJF_01475 8.8e-125 M domain protein
PMPDDMJF_01476 2.8e-185 M LPXTG cell wall anchor motif
PMPDDMJF_01477 9.5e-200 3.4.22.70 M Sortase family
PMPDDMJF_01478 1.6e-115 XK27_12140 V ATPases associated with a variety of cellular activities
PMPDDMJF_01479 8.2e-296 S Psort location CytoplasmicMembrane, score
PMPDDMJF_01480 2.7e-126 K Transcriptional regulatory protein, C terminal
PMPDDMJF_01481 1.3e-194 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PMPDDMJF_01482 7.7e-139 V ATPases associated with a variety of cellular activities
PMPDDMJF_01483 2.4e-209
PMPDDMJF_01484 1.5e-91
PMPDDMJF_01485 2.4e-164 O Belongs to the peptidase S8 family
PMPDDMJF_01486 3e-170 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMPDDMJF_01487 6.6e-181 D Alpha beta
PMPDDMJF_01488 2.4e-186 lipA I Carboxylesterase family
PMPDDMJF_01489 5.6e-206 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PMPDDMJF_01490 1.1e-77 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMPDDMJF_01491 0.0 mtlR K Mga helix-turn-helix domain
PMPDDMJF_01492 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PMPDDMJF_01493 7.2e-130 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PMPDDMJF_01494 3.3e-149 S haloacid dehalogenase-like hydrolase
PMPDDMJF_01495 3.1e-43
PMPDDMJF_01496 5.2e-10
PMPDDMJF_01497 1.8e-151 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PMPDDMJF_01498 7.1e-124 V ABC transporter
PMPDDMJF_01499 7.5e-206 bacI V MacB-like periplasmic core domain
PMPDDMJF_01500 0.0 M Leucine rich repeats (6 copies)
PMPDDMJF_01501 8.6e-28 M Leucine rich repeats (6 copies)
PMPDDMJF_01502 1.5e-69 3.4.22.70 M Sortase family
PMPDDMJF_01503 2.9e-229 ywhK S Membrane
PMPDDMJF_01504 3.1e-42
PMPDDMJF_01506 1.1e-147 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PMPDDMJF_01507 1.2e-201 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PMPDDMJF_01508 1.7e-224 pimH EGP Major facilitator Superfamily
PMPDDMJF_01509 1.3e-38
PMPDDMJF_01510 9.6e-32
PMPDDMJF_01511 7e-08
PMPDDMJF_01512 1e-09 yhjA K CsbD-like
PMPDDMJF_01513 4.6e-205 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PMPDDMJF_01514 7.2e-46
PMPDDMJF_01515 6e-205 ltrA S Bacterial low temperature requirement A protein (LtrA)
PMPDDMJF_01516 7.7e-123 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMPDDMJF_01517 2.6e-92 ccpN K Domain in cystathionine beta-synthase and other proteins.
PMPDDMJF_01518 0.0 ppdK 2.7.9.1 G Belongs to the PEP-utilizing enzyme family
PMPDDMJF_01519 6.8e-116 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PMPDDMJF_01520 1.5e-98 dps P Belongs to the Dps family
PMPDDMJF_01521 5.6e-33 copZ P Heavy-metal-associated domain
PMPDDMJF_01522 0.0 3.6.3.3, 3.6.3.5 P P-type ATPase
PMPDDMJF_01523 6.7e-23 ypbD S CAAX protease self-immunity
PMPDDMJF_01524 7.2e-215 opuCA 2.7.7.7 E ABC transporter, ATP-binding protein
PMPDDMJF_01525 1e-105 opuCB E ABC transporter permease
PMPDDMJF_01526 3.3e-172 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PMPDDMJF_01527 3.3e-110 opuCD P Binding-protein-dependent transport system inner membrane component
PMPDDMJF_01529 7.4e-109 K Tetracycline repressor, C-terminal all-alpha domain
PMPDDMJF_01530 0.0 ydgH S MMPL family
PMPDDMJF_01531 1.6e-49 K TRANSCRIPTIONal
PMPDDMJF_01532 3.1e-179 EGP Major facilitator Superfamily
PMPDDMJF_01533 7.7e-46 EGP Major facilitator Superfamily
PMPDDMJF_01534 1.6e-152 V ABC-type multidrug transport system, ATPase and permease components
PMPDDMJF_01535 1e-115 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PMPDDMJF_01536 4.6e-134 epsB M biosynthesis protein
PMPDDMJF_01537 2.8e-131 E lipolytic protein G-D-S-L family
PMPDDMJF_01538 1.4e-81 ccl S QueT transporter
PMPDDMJF_01539 1.3e-125 IQ Enoyl-(Acyl carrier protein) reductase
PMPDDMJF_01540 3.7e-37 XK27_01315 S Protein of unknown function (DUF2829)
PMPDDMJF_01541 7.5e-47 K sequence-specific DNA binding
PMPDDMJF_01542 1.7e-116 gpm5 3.1.3.3, 5.4.2.11 G Phosphoglycerate mutase family
PMPDDMJF_01543 1.3e-179 oppF P Belongs to the ABC transporter superfamily
PMPDDMJF_01544 1.1e-197 oppD P Belongs to the ABC transporter superfamily
PMPDDMJF_01545 2.5e-178 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMPDDMJF_01546 8e-163 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMPDDMJF_01547 5.9e-302 oppA E ABC transporter, substratebinding protein
PMPDDMJF_01548 9.9e-253 EGP Major facilitator Superfamily
PMPDDMJF_01549 1.3e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMPDDMJF_01550 7.3e-132 yrjD S LUD domain
PMPDDMJF_01551 1.7e-287 lutB C 4Fe-4S dicluster domain
PMPDDMJF_01552 1.2e-148 lutA C Cysteine-rich domain
PMPDDMJF_01553 4.5e-84
PMPDDMJF_01554 5.1e-51 chbA 2.7.1.196, 2.7.1.205 G Phosphotransferase system cellobiose-specific component IIA
PMPDDMJF_01555 7.2e-211 S Bacterial protein of unknown function (DUF871)
PMPDDMJF_01556 4.3e-68 S Domain of unknown function (DUF3284)
PMPDDMJF_01557 4.8e-07
PMPDDMJF_01558 6.6e-265 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMPDDMJF_01560 0.0 rafA 3.2.1.22 G alpha-galactosidase
PMPDDMJF_01561 7.7e-132 S Belongs to the UPF0246 family
PMPDDMJF_01562 3.2e-130 XK27_05520 S Uncharacterized protein conserved in bacteria (DUF2087)
PMPDDMJF_01563 0.0 VPA1266 3.1.11.5 L Helix-hairpin-helix containing domain
PMPDDMJF_01564 1.4e-80
PMPDDMJF_01565 2.4e-59 S WxL domain surface cell wall-binding
PMPDDMJF_01566 3e-145 frlD 2.7.1.218 G pfkB family carbohydrate kinase
PMPDDMJF_01567 4.3e-104 apc3 3.5.2.9 EQ Hydantoinase/oxoprolinase N-terminal region
PMPDDMJF_01568 3.2e-139
PMPDDMJF_01569 0.0 3.4.21.53 O Putative ATP-dependent Lon protease
PMPDDMJF_01570 0.0 S PglZ domain
PMPDDMJF_01571 4.5e-281 2.1.1.72 V Eco57I restriction-modification methylase
PMPDDMJF_01572 2.2e-175 L Belongs to the 'phage' integrase family
PMPDDMJF_01573 0.0 2.1.1.72 V Eco57I restriction-modification methylase
PMPDDMJF_01574 0.0 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
PMPDDMJF_01575 5.9e-95 S Domain of unknown function (DUF1788)
PMPDDMJF_01576 7.2e-72 S Putative inner membrane protein (DUF1819)
PMPDDMJF_01577 2.4e-212 ykiI
PMPDDMJF_01578 0.0 scrA 2.7.1.211 G phosphotransferase system
PMPDDMJF_01579 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
PMPDDMJF_01580 3.2e-181 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
PMPDDMJF_01581 6.3e-303 scrB 3.2.1.26 GH32 G invertase
PMPDDMJF_01582 7.1e-164 azoB GM NmrA-like family
PMPDDMJF_01583 8.5e-234 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PMPDDMJF_01584 2.2e-142 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PMPDDMJF_01585 2e-149 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PMPDDMJF_01586 9.1e-256 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PMPDDMJF_01587 8.7e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PMPDDMJF_01588 5.1e-62 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PMPDDMJF_01589 1.2e-222 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PMPDDMJF_01590 4.7e-126 IQ reductase
PMPDDMJF_01591 4.7e-163 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PMPDDMJF_01592 8.2e-174 fabK 1.3.1.9 S Nitronate monooxygenase
PMPDDMJF_01593 1.2e-33 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMPDDMJF_01594 5.9e-177 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PMPDDMJF_01595 6.2e-76 marR K Winged helix DNA-binding domain
PMPDDMJF_01596 3.1e-72 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PMPDDMJF_01597 1e-192 bioH 2.1.1.197, 3.1.1.85, 3.7.1.13, 3.7.1.9, 4.2.99.20 E Alpha/beta hydrolase family
PMPDDMJF_01598 2.3e-226 bdhA C Iron-containing alcohol dehydrogenase
PMPDDMJF_01599 1.4e-47 S Uncharacterized protein conserved in bacteria (DUF2316)
PMPDDMJF_01600 9.1e-66 K MarR family
PMPDDMJF_01601 1.3e-12 S response to antibiotic
PMPDDMJF_01602 1.3e-110 S Putative esterase
PMPDDMJF_01603 5.3e-198
PMPDDMJF_01604 2.4e-104 rmaB K Transcriptional regulator, MarR family
PMPDDMJF_01605 0.0 lmrA 3.6.3.44 V ABC transporter
PMPDDMJF_01606 3.8e-84 F NUDIX domain
PMPDDMJF_01607 3.9e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMPDDMJF_01608 3.8e-20
PMPDDMJF_01609 1.8e-118 S zinc-ribbon domain
PMPDDMJF_01610 4.4e-200 pbpX1 V Beta-lactamase
PMPDDMJF_01611 1.2e-186 K AI-2E family transporter
PMPDDMJF_01612 1.3e-128 srtA 3.4.22.70 M Sortase family
PMPDDMJF_01614 7.6e-65 gtcA S Teichoic acid glycosylation protein
PMPDDMJF_01615 6e-174 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PMPDDMJF_01616 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMPDDMJF_01617 4e-167 gbuC E glycine betaine
PMPDDMJF_01618 2e-131 proW E glycine betaine
PMPDDMJF_01619 4.5e-222 gbuA 3.6.3.32 E glycine betaine
PMPDDMJF_01620 9.2e-138 sfsA S Belongs to the SfsA family
PMPDDMJF_01621 1.8e-67 usp1 T Universal stress protein family
PMPDDMJF_01622 7.4e-252 yxbA 6.3.1.12 S ATP-grasp enzyme
PMPDDMJF_01624 2.4e-130 thrB 2.7.1.39, 4.2.3.1 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PMPDDMJF_01625 3.2e-286 thrC 4.2.3.1 E Threonine synthase
PMPDDMJF_01626 6.4e-229 hom 1.1.1.3 E homoserine dehydrogenase
PMPDDMJF_01627 1.1e-250 yclM 2.7.2.4 E Belongs to the aspartokinase family
PMPDDMJF_01628 1.1e-166 yqiK S SPFH domain / Band 7 family
PMPDDMJF_01629 2.3e-39
PMPDDMJF_01630 2.5e-173 pfoS S Phosphotransferase system, EIIC
PMPDDMJF_01631 8e-177 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMPDDMJF_01632 7.1e-217 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PMPDDMJF_01633 2.5e-47
PMPDDMJF_01634 1.1e-27 L Transposase DDE domain
PMPDDMJF_01638 1.5e-180 S Aldo keto reductase
PMPDDMJF_01639 2.2e-118 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMPDDMJF_01640 1.9e-217 yqiG C Oxidoreductase
PMPDDMJF_01641 1.1e-253 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PMPDDMJF_01642 1.5e-135
PMPDDMJF_01643 4.5e-20
PMPDDMJF_01644 6.5e-261 mntH P H( )-stimulated, divalent metal cation uptake system
PMPDDMJF_01645 0.0 pacL P P-type ATPase
PMPDDMJF_01646 7.5e-56
PMPDDMJF_01647 1.7e-238 EGP Major Facilitator Superfamily
PMPDDMJF_01648 0.0 mco Q Multicopper oxidase
PMPDDMJF_01649 3.6e-25
PMPDDMJF_01650 6.4e-111 2.5.1.105 P Cation efflux family
PMPDDMJF_01651 2.1e-52 czrA K Transcriptional regulator, ArsR family
PMPDDMJF_01652 1.3e-48
PMPDDMJF_01653 7.4e-57 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
PMPDDMJF_01654 1.5e-16
PMPDDMJF_01655 6.7e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PMPDDMJF_01656 2e-166 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMPDDMJF_01657 2.8e-221 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PMPDDMJF_01658 2.1e-70 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PMPDDMJF_01659 1.2e-255 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PMPDDMJF_01660 1.5e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
PMPDDMJF_01661 7.8e-188 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PMPDDMJF_01662 3.7e-196 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PMPDDMJF_01663 2.5e-62
PMPDDMJF_01664 4.5e-73 3.6.1.55 L NUDIX domain
PMPDDMJF_01665 3.4e-147 EG EamA-like transporter family
PMPDDMJF_01666 7e-178 V ABC transporter transmembrane region
PMPDDMJF_01667 1.7e-32 S Phospholipase A2
PMPDDMJF_01668 2.6e-52 ybjQ S Belongs to the UPF0145 family
PMPDDMJF_01669 4.8e-160 3.5.1.10 C nadph quinone reductase
PMPDDMJF_01670 2.8e-246 amt P ammonium transporter
PMPDDMJF_01671 2.4e-178 yfeX P Peroxidase
PMPDDMJF_01672 2e-118 yhiD S MgtC family
PMPDDMJF_01673 2.1e-114 F DNA RNA non-specific endonuclease
PMPDDMJF_01674 0.0 ybiT S ABC transporter, ATP-binding protein
PMPDDMJF_01675 0.0 mutS L ATPase domain of DNA mismatch repair MUTS family
PMPDDMJF_01676 1e-110 ung2 3.2.2.27 L Uracil-DNA glycosylase
PMPDDMJF_01677 2.6e-129 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMPDDMJF_01678 6.7e-302 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
PMPDDMJF_01679 2.1e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMPDDMJF_01680 2.3e-86 epsG 2.4.1.293 GT2 M Glycosyltransferase like family 2
PMPDDMJF_01682 0.0 sca1 G Belongs to the glycosyl hydrolase 31 family
PMPDDMJF_01683 9.9e-146 3.5.2.6 V Beta-lactamase enzyme family
PMPDDMJF_01684 8e-191 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PMPDDMJF_01685 7.4e-194 blaA6 V Beta-lactamase
PMPDDMJF_01686 1.6e-155 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PMPDDMJF_01687 8.9e-162 ybbH_2 K Helix-turn-helix domain, rpiR family
PMPDDMJF_01688 3.1e-81 2.7.1.191 G PTS system sorbose subfamily IIB component
PMPDDMJF_01689 8.3e-151 G PTS system mannose/fructose/sorbose family IID component
PMPDDMJF_01690 2e-128 G PTS system sorbose-specific iic component
PMPDDMJF_01691 1.5e-200 S endonuclease exonuclease phosphatase family protein
PMPDDMJF_01692 1.7e-173 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PMPDDMJF_01693 3.1e-54
PMPDDMJF_01694 3.4e-242 mntH P H( )-stimulated, divalent metal cation uptake system
PMPDDMJF_01695 1.2e-112 K Bacterial regulatory proteins, tetR family
PMPDDMJF_01696 9.1e-164 corA P CorA-like Mg2+ transporter protein
PMPDDMJF_01697 2.6e-101 S Protein of unknown function (DUF1211)
PMPDDMJF_01698 6.1e-124 S membrane transporter protein
PMPDDMJF_01699 3e-48
PMPDDMJF_01700 5.9e-154 supH G Sucrose-6F-phosphate phosphohydrolase
PMPDDMJF_01701 5.4e-98 K transcriptional regulator
PMPDDMJF_01702 2.8e-128 macB V ABC transporter, ATP-binding protein
PMPDDMJF_01703 0.0 ylbB V ABC transporter permease
PMPDDMJF_01704 4.7e-110 usp 3.5.1.28 CBM50 D CHAP domain
PMPDDMJF_01707 1.1e-104 S Protein of unknown function (DUF1211)
PMPDDMJF_01710 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMPDDMJF_01711 7.9e-223 mesE M Transport protein ComB
PMPDDMJF_01712 1.4e-59
PMPDDMJF_01714 1.5e-250 yjjP S Putative threonine/serine exporter
PMPDDMJF_01715 2.8e-45 spiA K TRANSCRIPTIONal
PMPDDMJF_01716 3.6e-45 S Enterocin A Immunity
PMPDDMJF_01717 5.4e-46 S Enterocin A Immunity
PMPDDMJF_01718 3.8e-137
PMPDDMJF_01719 6.6e-65
PMPDDMJF_01720 2.2e-54 K Transcriptional regulator PadR-like family
PMPDDMJF_01721 8.8e-113 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_01722 1e-206 MA20_36090 S Protein of unknown function (DUF2974)
PMPDDMJF_01723 4e-231 N Uncharacterized conserved protein (DUF2075)
PMPDDMJF_01724 4.3e-103
PMPDDMJF_01725 5.2e-35
PMPDDMJF_01726 4e-80 perR P Belongs to the Fur family
PMPDDMJF_01727 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMPDDMJF_01728 1.9e-43 ykuJ S Protein of unknown function (DUF1797)
PMPDDMJF_01729 7.7e-219 patA 2.6.1.1 E Aminotransferase
PMPDDMJF_01731 1.9e-165 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PMPDDMJF_01732 1.2e-196 cpoA GT4 M Glycosyltransferase, group 1 family protein
PMPDDMJF_01733 1.2e-230 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PMPDDMJF_01735 3.8e-283 ybeC E amino acid
PMPDDMJF_01736 2.1e-94 sigH K DNA-templated transcription, initiation
PMPDDMJF_01762 1.1e-178 rapL 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
PMPDDMJF_01763 5.8e-147 S Sulfite exporter TauE/SafE
PMPDDMJF_01764 2.9e-156 K Sugar-specific transcriptional regulator TrmB
PMPDDMJF_01765 1.3e-114 6.3.4.4 S Zeta toxin
PMPDDMJF_01766 7.5e-163 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PMPDDMJF_01767 3.6e-70
PMPDDMJF_01768 9.3e-210 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PMPDDMJF_01769 5.8e-49 ptxB 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
PMPDDMJF_01770 1.2e-198 GKT transcriptional antiterminator
PMPDDMJF_01772 5.8e-267 frdC 1.3.5.4 C HI0933-like protein
PMPDDMJF_01773 4.4e-52
PMPDDMJF_01774 1.3e-61
PMPDDMJF_01775 1.2e-272 bglP 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PMPDDMJF_01776 1.4e-291 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMPDDMJF_01777 1.5e-95 yxaF K Bacterial regulatory proteins, tetR family
PMPDDMJF_01778 4.7e-247 lmrB EGP Major facilitator Superfamily
PMPDDMJF_01779 1.1e-258 gor 1.8.1.7 C Glutathione reductase
PMPDDMJF_01780 1.5e-280 pipD E Dipeptidase
PMPDDMJF_01781 4e-62 S Coenzyme PQQ synthesis protein D (PqqD)
PMPDDMJF_01782 1.4e-294 S OPT oligopeptide transporter protein
PMPDDMJF_01783 2e-186 tdcB 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PMPDDMJF_01784 5.8e-200 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PMPDDMJF_01786 2.2e-194 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMPDDMJF_01787 1.1e-292 clcA P chloride
PMPDDMJF_01788 2.7e-27
PMPDDMJF_01789 5.3e-111 S Putative esterase
PMPDDMJF_01790 7.3e-219 2.7.1.211 G phosphotransferase system
PMPDDMJF_01791 1.7e-79 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PMPDDMJF_01792 1.3e-93 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PMPDDMJF_01793 3.6e-48 yleF K Helix-turn-helix domain, rpiR family
PMPDDMJF_01794 5.1e-31 treB G phosphotransferase system
PMPDDMJF_01795 1.4e-49 S Protein of unknown function (DUF1093)
PMPDDMJF_01797 7.3e-72 ybfG M peptidoglycan-binding domain-containing protein
PMPDDMJF_01798 2.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PMPDDMJF_01799 1.4e-164 S Tetratricopeptide repeat
PMPDDMJF_01800 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMPDDMJF_01801 1.8e-50
PMPDDMJF_01802 5.4e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PMPDDMJF_01804 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
PMPDDMJF_01805 1e-169 holA 2.7.7.7 L DNA polymerase III delta subunit
PMPDDMJF_01806 0.0 comEC S Competence protein ComEC
PMPDDMJF_01807 1.1e-111 comEA L Competence protein ComEA
PMPDDMJF_01808 1.4e-181 ylbL T Belongs to the peptidase S16 family
PMPDDMJF_01809 1.5e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PMPDDMJF_01810 5.9e-100 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PMPDDMJF_01811 2.5e-62 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PMPDDMJF_01812 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PMPDDMJF_01813 2.2e-210 ftsW D Belongs to the SEDS family
PMPDDMJF_01814 0.0 typA T GTP-binding protein TypA
PMPDDMJF_01815 1.3e-145 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PMPDDMJF_01816 2.4e-46 yktA S Belongs to the UPF0223 family
PMPDDMJF_01817 1.1e-156 1.1.1.27 C L-malate dehydrogenase activity
PMPDDMJF_01818 2.4e-259 lpdA 1.8.1.4 C Dehydrogenase
PMPDDMJF_01819 1.2e-265 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PMPDDMJF_01820 1.4e-181 pdhB 1.2.4.1, 1.2.4.4 C Transketolase, C-terminal domain protein
PMPDDMJF_01821 2.5e-211 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PMPDDMJF_01822 5.2e-89 S E1-E2 ATPase
PMPDDMJF_01823 2.9e-99 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PMPDDMJF_01824 1.3e-45
PMPDDMJF_01825 9.5e-69
PMPDDMJF_01826 2.9e-31 ykzG S Belongs to the UPF0356 family
PMPDDMJF_01827 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMPDDMJF_01828 6.1e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PMPDDMJF_01829 1.4e-244 els S Sterol carrier protein domain
PMPDDMJF_01830 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PMPDDMJF_01831 5.3e-116 S Repeat protein
PMPDDMJF_01832 9.9e-123 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
PMPDDMJF_01833 1.5e-245 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PMPDDMJF_01834 0.0 uvrA2 L ABC transporter
PMPDDMJF_01835 8.3e-57 XK27_04120 S Putative amino acid metabolism
PMPDDMJF_01836 1.3e-218 iscS 2.8.1.7 E Aminotransferase class V
PMPDDMJF_01837 4.8e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PMPDDMJF_01838 4.3e-29
PMPDDMJF_01839 1.4e-95 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PMPDDMJF_01840 2e-115 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
PMPDDMJF_01841 1.9e-209 yaaN P Toxic anion resistance protein (TelA)
PMPDDMJF_01842 2.4e-262 ydiC1 EGP Major facilitator Superfamily
PMPDDMJF_01843 6.7e-154 pstS P Phosphate
PMPDDMJF_01844 6.9e-36 cspA K Cold shock protein
PMPDDMJF_01845 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PMPDDMJF_01846 5.7e-85 divIVA D DivIVA protein
PMPDDMJF_01847 5.7e-146 ylmH S S4 domain protein
PMPDDMJF_01848 2.4e-44 yggT S integral membrane protein
PMPDDMJF_01849 8.7e-78 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PMPDDMJF_01850 3.1e-226 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PMPDDMJF_01851 2.5e-245 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PMPDDMJF_01852 5.7e-155 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PMPDDMJF_01853 2.5e-200 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PMPDDMJF_01854 6e-263 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PMPDDMJF_01855 7.5e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PMPDDMJF_01856 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PMPDDMJF_01857 3.1e-49 ftsL D cell division protein FtsL
PMPDDMJF_01858 2.4e-170 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PMPDDMJF_01859 9.8e-79 mraZ K Belongs to the MraZ family
PMPDDMJF_01860 4.2e-45
PMPDDMJF_01861 3.1e-270 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMPDDMJF_01862 1.2e-151 aatB ET ABC transporter substrate-binding protein
PMPDDMJF_01863 1.5e-112 glnQ 3.6.3.21 E ABC transporter
PMPDDMJF_01864 1.2e-109 artQ P ABC transporter permease
PMPDDMJF_01865 2.6e-141 minD D Belongs to the ParA family
PMPDDMJF_01866 2.2e-114 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PMPDDMJF_01867 2.3e-85 mreD M rod shape-determining protein MreD
PMPDDMJF_01868 2.1e-149 mreC M Involved in formation and maintenance of cell shape
PMPDDMJF_01869 1e-179 mreB D cell shape determining protein MreB
PMPDDMJF_01870 2e-118 radC L DNA repair protein
PMPDDMJF_01871 1.1e-113 S Haloacid dehalogenase-like hydrolase
PMPDDMJF_01872 2.3e-240 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PMPDDMJF_01873 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PMPDDMJF_01874 6.3e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PMPDDMJF_01875 1.1e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PMPDDMJF_01876 9.6e-214 iscS2 2.8.1.7 E Aminotransferase class V
PMPDDMJF_01877 2.5e-271 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PMPDDMJF_01878 5.1e-84 ytsP 1.8.4.14 T GAF domain-containing protein
PMPDDMJF_01879 6.1e-111 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PMPDDMJF_01880 2.4e-69 K Cro/C1-type HTH DNA-binding domain
PMPDDMJF_01881 0.0 yhgF K Tex-like protein N-terminal domain protein
PMPDDMJF_01882 4.9e-11
PMPDDMJF_01883 3e-129 S Protein of unknown function C-terminus (DUF2399)
PMPDDMJF_01884 0.0 D Putative exonuclease SbcCD, C subunit
PMPDDMJF_01885 2.3e-139
PMPDDMJF_01886 8.5e-231
PMPDDMJF_01887 4.8e-46 S Protein of unknown function (DUF2568)
PMPDDMJF_01888 1e-66 K helix_turn_helix, mercury resistance
PMPDDMJF_01889 1.4e-208
PMPDDMJF_01890 4.4e-158 yvfR V ABC transporter
PMPDDMJF_01891 6.5e-134 yvfS V ABC-2 type transporter
PMPDDMJF_01892 9.6e-203 desK 2.7.13.3 T Histidine kinase
PMPDDMJF_01893 1.2e-103 desR K helix_turn_helix, Lux Regulon
PMPDDMJF_01894 6.3e-154 S Uncharacterised protein, DegV family COG1307
PMPDDMJF_01895 8.9e-147 IQ reductase
PMPDDMJF_01896 1e-111 I ABC-2 family transporter protein
PMPDDMJF_01897 1.1e-161 CcmA V ABC transporter
PMPDDMJF_01898 3.6e-64 K helix_turn_helix gluconate operon transcriptional repressor
PMPDDMJF_01899 8.9e-221 ysdA CP ABC-2 family transporter protein
PMPDDMJF_01900 3.7e-165 natA S abc transporter atp-binding protein
PMPDDMJF_01901 2.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMPDDMJF_01902 5.1e-176 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMPDDMJF_01903 2.8e-160 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PMPDDMJF_01904 1.3e-204 S Calcineurin-like phosphoesterase
PMPDDMJF_01906 1.3e-117 mprF 2.3.2.3 M lysyltransferase activity
PMPDDMJF_01907 2.3e-98 2.3.1.128 J Acetyltransferase (GNAT) domain
PMPDDMJF_01908 2e-97
PMPDDMJF_01909 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PMPDDMJF_01910 9e-130 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
PMPDDMJF_01912 1.3e-263 lysP E amino acid
PMPDDMJF_01913 5.9e-296 frvR K Mga helix-turn-helix domain
PMPDDMJF_01914 4.7e-304 frvR K Mga helix-turn-helix domain
PMPDDMJF_01915 1.5e-223 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PMPDDMJF_01916 3.3e-88 ywrF S Flavin reductase like domain
PMPDDMJF_01917 2.1e-166 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PMPDDMJF_01918 2.7e-45
PMPDDMJF_01919 5.7e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMPDDMJF_01920 3.1e-24
PMPDDMJF_01921 3.2e-209 yubA S AI-2E family transporter
PMPDDMJF_01922 7.5e-80
PMPDDMJF_01923 3.5e-53
PMPDDMJF_01925 3.1e-192 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
PMPDDMJF_01926 8.7e-42
PMPDDMJF_01927 1.2e-41 ygbF S Sugar efflux transporter for intercellular exchange
PMPDDMJF_01928 1.5e-58 K Transcriptional regulator PadR-like family
PMPDDMJF_01929 2.8e-188 K DNA-binding helix-turn-helix protein
PMPDDMJF_01932 1.3e-22 S Bacteriophage abortive infection AbiH
PMPDDMJF_01935 1.5e-132
PMPDDMJF_01936 2.1e-70
PMPDDMJF_01938 9.3e-155 dnaC L IstB-like ATP binding protein
PMPDDMJF_01939 2.5e-74 L Helix-turn-helix domain
PMPDDMJF_01940 6e-51 L Helix-turn-helix domain
PMPDDMJF_01946 7.8e-44 S Domain of unknown function (DUF1883)
PMPDDMJF_01948 1.1e-138 S ORF6N domain
PMPDDMJF_01949 7.2e-155 ps305 S Protein of unknown function (Hypoth_ymh)
PMPDDMJF_01952 7.5e-61 ps115 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_01953 6e-20 E Zn peptidase
PMPDDMJF_01954 7.8e-134
PMPDDMJF_01956 4.1e-59
PMPDDMJF_01957 0.0 pepF E Oligopeptidase F
PMPDDMJF_01958 3.2e-49 V ABC transporter transmembrane region
PMPDDMJF_01959 9.3e-226 V ABC transporter transmembrane region
PMPDDMJF_01960 1.7e-171 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_01961 5.5e-86 C FMN binding
PMPDDMJF_01962 1.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PMPDDMJF_01963 3.2e-170 mleP S Sodium Bile acid symporter family
PMPDDMJF_01964 0.0 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PMPDDMJF_01965 1.5e-155 mleR K LysR family
PMPDDMJF_01966 9.5e-135 3.6.1.13, 3.6.1.55 F NUDIX domain
PMPDDMJF_01967 9.9e-108 pncA Q Isochorismatase family
PMPDDMJF_01968 2.4e-267 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMPDDMJF_01969 1.5e-211 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
PMPDDMJF_01970 1.9e-64 ugpA P ABC-type sugar transport systems, permease components
PMPDDMJF_01971 3.3e-80 ugpA P ABC-type sugar transport systems, permease components
PMPDDMJF_01972 3.4e-149 ugpE G ABC transporter permease
PMPDDMJF_01973 1.7e-149 ugpB G Bacterial extracellular solute-binding protein
PMPDDMJF_01974 1.8e-135 mga K M protein trans-acting positive regulator
PMPDDMJF_01975 1.2e-86
PMPDDMJF_01976 0.0 S Bacterial membrane protein YfhO
PMPDDMJF_01977 4.1e-150 licT2 K CAT RNA binding domain
PMPDDMJF_01978 0.0 bglH 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PMPDDMJF_01979 2.2e-284 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMPDDMJF_01980 1.1e-256 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PMPDDMJF_01981 1.9e-247 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PMPDDMJF_01982 1.5e-52
PMPDDMJF_01983 2.5e-65
PMPDDMJF_01984 5.7e-172 hprA 1.1.1.29 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMPDDMJF_01985 2.5e-190 L Psort location Cytoplasmic, score
PMPDDMJF_01986 6.2e-34
PMPDDMJF_01987 2.6e-24
PMPDDMJF_01988 2.8e-102
PMPDDMJF_01989 4.7e-73 K helix_turn_helix multiple antibiotic resistance protein
PMPDDMJF_01990 6e-239 ydiC1 EGP Major facilitator Superfamily
PMPDDMJF_01991 0.0 pbpC M NTF2-like N-terminal transpeptidase domain
PMPDDMJF_01992 6.9e-35 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PMPDDMJF_01993 3.1e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMPDDMJF_01994 1.8e-44 S Phage gp6-like head-tail connector protein
PMPDDMJF_01995 5.7e-43 S Phage capsid family
PMPDDMJF_01996 3.8e-177 S Phage capsid family
PMPDDMJF_01997 2.4e-44 S Phage portal protein
PMPDDMJF_01998 4.4e-141 S Phage portal protein
PMPDDMJF_02000 1e-103 sip L Belongs to the 'phage' integrase family
PMPDDMJF_02001 3.8e-125 lctO C IMP dehydrogenase / GMP reductase domain
PMPDDMJF_02002 7.3e-291 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PMPDDMJF_02003 3.5e-188 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMPDDMJF_02004 5e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PMPDDMJF_02005 3e-162 S WxL domain surface cell wall-binding
PMPDDMJF_02006 5e-185 S Bacterial protein of unknown function (DUF916)
PMPDDMJF_02007 1e-156 S Protein of unknown function C-terminal (DUF3324)
PMPDDMJF_02008 0.0 S Leucine-rich repeat (LRR) protein
PMPDDMJF_02009 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PMPDDMJF_02010 1.3e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PMPDDMJF_02011 3e-240 tilS 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PMPDDMJF_02012 9.3e-70 yabR J RNA binding
PMPDDMJF_02013 1.1e-66 divIC D cell cycle
PMPDDMJF_02014 2.7e-39 yabO J S4 domain protein
PMPDDMJF_02015 9.5e-281 yabM S Polysaccharide biosynthesis protein
PMPDDMJF_02016 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PMPDDMJF_02017 1.1e-101 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PMPDDMJF_02018 4.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PMPDDMJF_02019 1.5e-261 S Putative peptidoglycan binding domain
PMPDDMJF_02020 2.3e-119 S (CBS) domain
PMPDDMJF_02021 1.8e-99 yciB M ErfK YbiS YcfS YnhG
PMPDDMJF_02023 3e-119 gltD 1.4.1.13, 1.4.1.14 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PMPDDMJF_02024 9.5e-132 gltD 1.4.1.13, 1.4.1.14 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PMPDDMJF_02025 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1, 2.1.1.21 E GXGXG motif
PMPDDMJF_02026 3.3e-68 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1, 2.1.1.21 E GXGXG motif
PMPDDMJF_02027 1.1e-84 S QueT transporter
PMPDDMJF_02028 5.6e-62 ndoA L Toxic component of a toxin-antitoxin (TA) module
PMPDDMJF_02029 5.2e-32
PMPDDMJF_02030 9.1e-217 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PMPDDMJF_02031 8.5e-63 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PMPDDMJF_02032 7e-265 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PMPDDMJF_02034 8.7e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PMPDDMJF_02035 1.1e-144
PMPDDMJF_02036 9.6e-123 S Tetratricopeptide repeat
PMPDDMJF_02037 4.1e-124
PMPDDMJF_02038 1.2e-65
PMPDDMJF_02039 2.5e-42 rpmE2 J Ribosomal protein L31
PMPDDMJF_02040 1.6e-235 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMPDDMJF_02041 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PMPDDMJF_02042 1.3e-157 S Protein of unknown function (DUF1211)
PMPDDMJF_02043 1.7e-53 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PMPDDMJF_02044 1e-78 ywiB S Domain of unknown function (DUF1934)
PMPDDMJF_02045 4.3e-155 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
PMPDDMJF_02046 7.9e-268 ywfO S HD domain protein
PMPDDMJF_02047 2.4e-80 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L NUDIX domain
PMPDDMJF_02048 1.8e-179 S DUF218 domain
PMPDDMJF_02049 2.1e-53 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PMPDDMJF_02050 7.2e-209 Q Imidazolonepropionase and related amidohydrolases
PMPDDMJF_02051 1.7e-233 dapE 3.5.1.18 E Peptidase dimerisation domain
PMPDDMJF_02052 9.6e-193 E glutamate:sodium symporter activity
PMPDDMJF_02053 2.6e-55 nudA S ASCH
PMPDDMJF_02054 1.3e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMPDDMJF_02055 6.5e-217 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PMPDDMJF_02056 5.4e-220 ysaA V RDD family
PMPDDMJF_02057 1e-151 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PMPDDMJF_02058 7.7e-120 ybbL S ABC transporter, ATP-binding protein
PMPDDMJF_02059 9e-120 ybbM S Uncharacterised protein family (UPF0014)
PMPDDMJF_02060 1.3e-159 czcD P cation diffusion facilitator family transporter
PMPDDMJF_02061 6.7e-181 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PMPDDMJF_02062 1.1e-37 veg S Biofilm formation stimulator VEG
PMPDDMJF_02063 1.5e-158 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PMPDDMJF_02064 7.3e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PMPDDMJF_02065 1.8e-147 tatD L hydrolase, TatD family
PMPDDMJF_02066 5.8e-80 manR 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G phosphoenolpyruvate-dependent sugar phosphotransferase system
PMPDDMJF_02067 5.6e-186 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
PMPDDMJF_02068 2.4e-172 yqhA G Aldose 1-epimerase
PMPDDMJF_02069 4.7e-123 T LytTr DNA-binding domain
PMPDDMJF_02070 3.6e-139 2.7.13.3 T GHKL domain
PMPDDMJF_02071 0.0 V ABC transporter
PMPDDMJF_02072 0.0 V ABC transporter
PMPDDMJF_02073 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMPDDMJF_02074 4.3e-174 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PMPDDMJF_02075 7.3e-152 yunF F Protein of unknown function DUF72
PMPDDMJF_02076 1.2e-90 3.6.1.55 F NUDIX domain
PMPDDMJF_02077 6e-171 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PMPDDMJF_02078 1.6e-106 yiiE S Protein of unknown function (DUF1211)
PMPDDMJF_02079 2.4e-127 cobB K Sir2 family
PMPDDMJF_02080 1.4e-16
PMPDDMJF_02081 6.1e-171
PMPDDMJF_02082 9.4e-97 yxkA S Phosphatidylethanolamine-binding protein
PMPDDMJF_02083 1.6e-18
PMPDDMJF_02084 1.1e-149 ypuA S Protein of unknown function (DUF1002)
PMPDDMJF_02085 2.7e-174 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PMPDDMJF_02086 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PMPDDMJF_02087 2.1e-285 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PMPDDMJF_02088 2.9e-176 S Aldo keto reductase
PMPDDMJF_02089 1.4e-153 Q Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
PMPDDMJF_02090 8.1e-93 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PMPDDMJF_02091 6.3e-241 dinF V MatE
PMPDDMJF_02092 7.3e-110 S TPM domain
PMPDDMJF_02093 1e-102 lemA S LemA family
PMPDDMJF_02094 1.6e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMPDDMJF_02095 1.5e-50 V efflux transmembrane transporter activity
PMPDDMJF_02096 1.6e-142 V efflux transmembrane transporter activity
PMPDDMJF_02097 1.4e-27 V ATPases associated with a variety of cellular activities
PMPDDMJF_02098 2.6e-65 nrp 1.20.4.1 P ArsC family
PMPDDMJF_02099 0.0 clpL O associated with various cellular activities
PMPDDMJF_02100 3.1e-144 ywqE 3.1.3.48 GM PHP domain protein
PMPDDMJF_02101 5.4e-156 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMPDDMJF_02102 3.2e-115 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PMPDDMJF_02103 3.4e-162 repA S Replication initiator protein A
PMPDDMJF_02104 9.6e-43 relB L Addiction module antitoxin, RelB DinJ family
PMPDDMJF_02105 5.9e-28
PMPDDMJF_02106 4.1e-116 S protein conserved in bacteria
PMPDDMJF_02107 1.7e-39
PMPDDMJF_02108 5.3e-22
PMPDDMJF_02109 0.0 L MobA MobL family protein
PMPDDMJF_02110 2.4e-90 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PMPDDMJF_02111 1.6e-155 glcU U sugar transport
PMPDDMJF_02112 2.4e-22 J Putative rRNA methylase
PMPDDMJF_02113 1.9e-35 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PMPDDMJF_02114 7.3e-49 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PMPDDMJF_02115 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PMPDDMJF_02116 3.5e-185 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PMPDDMJF_02117 2.7e-38 rafA 3.2.1.22 G alpha-galactosidase
PMPDDMJF_02118 0.0 kup P Transport of potassium into the cell
PMPDDMJF_02119 8.7e-167 V ATPases associated with a variety of cellular activities
PMPDDMJF_02120 1.9e-217 S ABC-2 family transporter protein
PMPDDMJF_02121 1.7e-196
PMPDDMJF_02122 1.3e-108
PMPDDMJF_02125 0.0
PMPDDMJF_02126 2.3e-51 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
PMPDDMJF_02127 8e-287 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
PMPDDMJF_02128 0.0 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
PMPDDMJF_02129 1.4e-156 lacT K PRD domain
PMPDDMJF_02130 5.5e-29
PMPDDMJF_02131 4.2e-84 S protein conserved in bacteria
PMPDDMJF_02132 2.2e-39
PMPDDMJF_02133 5.2e-25
PMPDDMJF_02134 0.0 L MobA MobL family protein
PMPDDMJF_02135 3.6e-71 traI 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PMPDDMJF_02136 2.5e-31 L Phage integrase family
PMPDDMJF_02137 6.1e-98 soj D AAA domain
PMPDDMJF_02138 8e-10
PMPDDMJF_02139 3.6e-96 repE K Primase C terminal 1 (PriCT-1)
PMPDDMJF_02140 6.1e-23 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PMPDDMJF_02141 4.1e-49 tnp2PF3 L Transposase DDE domain
PMPDDMJF_02142 3.5e-70 adhR K helix_turn_helix, mercury resistance
PMPDDMJF_02143 7.1e-87 bioY S BioY family
PMPDDMJF_02144 1.4e-62
PMPDDMJF_02145 3.1e-225 queG 1.17.99.6 C Domain of unknown function (DUF1730)
PMPDDMJF_02146 4.3e-144 ptp3 3.1.3.48 T Tyrosine phosphatase family
PMPDDMJF_02147 1.8e-55 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_02148 4e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
PMPDDMJF_02149 6.4e-69 S COG NOG38524 non supervised orthologous group
PMPDDMJF_02150 3.2e-55 yphJ 4.1.1.44 S decarboxylase
PMPDDMJF_02151 1.8e-77 yphH S Cupin domain
PMPDDMJF_02152 4.8e-157 K Transcriptional regulator
PMPDDMJF_02153 1.5e-98 S ABC-2 family transporter protein
PMPDDMJF_02154 7.5e-169 bcrA V AAA domain, putative AbiEii toxin, Type IV TA system
PMPDDMJF_02155 4.9e-117 T Transcriptional regulatory protein, C terminal
PMPDDMJF_02156 1.9e-156 T GHKL domain
PMPDDMJF_02157 0.0 oppA E ABC transporter, substratebinding protein
PMPDDMJF_02158 1.2e-157 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
PMPDDMJF_02159 5.2e-133 dck 2.7.1.74 F deoxynucleoside kinase
PMPDDMJF_02160 1.6e-137 pnuC H nicotinamide mononucleotide transporter
PMPDDMJF_02161 2.1e-171 IQ NAD dependent epimerase/dehydratase family
PMPDDMJF_02162 5.2e-153 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMPDDMJF_02163 4.3e-121 G alpha-ribazole phosphatase activity
PMPDDMJF_02164 2.8e-149 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PMPDDMJF_02165 7.6e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PMPDDMJF_02166 2.2e-108 yktB S Belongs to the UPF0637 family
PMPDDMJF_02167 6e-76 yueI S Protein of unknown function (DUF1694)
PMPDDMJF_02168 0.0 gshF 6.3.2.2, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
PMPDDMJF_02169 3e-240 rarA L recombination factor protein RarA
PMPDDMJF_02171 1.1e-38
PMPDDMJF_02172 2.9e-82 usp6 T universal stress protein
PMPDDMJF_02173 6.1e-152 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_02174 3.4e-115 yhfA S HAD hydrolase, family IA, variant 3
PMPDDMJF_02175 5.8e-180 S Protein of unknown function (DUF2785)
PMPDDMJF_02176 2.9e-66 yueI S Protein of unknown function (DUF1694)
PMPDDMJF_02177 2.7e-22
PMPDDMJF_02178 1.1e-280 sufB O assembly protein SufB
PMPDDMJF_02179 1e-78 nifU C SUF system FeS assembly protein, NifU family
PMPDDMJF_02180 1e-218 csdA 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PMPDDMJF_02181 1.1e-189 sufD O FeS assembly protein SufD
PMPDDMJF_02182 2.9e-142 sufC O FeS assembly ATPase SufC
PMPDDMJF_02183 3.7e-104 metI P ABC transporter permease
PMPDDMJF_02184 2.3e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PMPDDMJF_02185 2e-149 P Belongs to the nlpA lipoprotein family
PMPDDMJF_02186 4e-137 P Belongs to the nlpA lipoprotein family
PMPDDMJF_02187 7.5e-222 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PMPDDMJF_02188 9.5e-49 gcvH E glycine cleavage
PMPDDMJF_02189 5.3e-223 rodA D Belongs to the SEDS family
PMPDDMJF_02190 1.1e-30 S Protein of unknown function (DUF2969)
PMPDDMJF_02191 9.1e-55 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PMPDDMJF_02192 2.2e-18 epuA S DNA-directed RNA polymerase subunit beta
PMPDDMJF_02193 9.4e-178 mbl D Cell shape determining protein MreB Mrl
PMPDDMJF_02194 4.2e-31 ywzB S Protein of unknown function (DUF1146)
PMPDDMJF_02195 8.3e-70 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PMPDDMJF_02196 1.3e-244 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PMPDDMJF_02197 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PMPDDMJF_02198 9.5e-286 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PMPDDMJF_02199 5.9e-89 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMPDDMJF_02200 8.6e-39 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PMPDDMJF_02201 3.3e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMPDDMJF_02202 7.9e-126 atpB C it plays a direct role in the translocation of protons across the membrane
PMPDDMJF_02203 5.7e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PMPDDMJF_02204 4.4e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PMPDDMJF_02205 3.1e-184 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PMPDDMJF_02206 5.7e-152 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PMPDDMJF_02207 5.6e-176 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PMPDDMJF_02208 1.3e-110 tdk 2.7.1.21 F thymidine kinase
PMPDDMJF_02209 2.5e-261 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PMPDDMJF_02210 3.5e-196 ampC V Beta-lactamase
PMPDDMJF_02211 2e-163 1.13.11.2 S glyoxalase
PMPDDMJF_02212 3.9e-139 S NADPH-dependent FMN reductase
PMPDDMJF_02213 0.0 yfiC V ABC transporter
PMPDDMJF_02214 0.0 ycfI V ABC transporter, ATP-binding protein
PMPDDMJF_02215 2.2e-119 K Bacterial regulatory proteins, tetR family
PMPDDMJF_02216 7.2e-127 G Phosphoglycerate mutase family
PMPDDMJF_02217 1.6e-07
PMPDDMJF_02219 1.2e-285 pipD E Dipeptidase
PMPDDMJF_02220 1.4e-104 S Protein of unknown function (DUF1211)
PMPDDMJF_02221 3.9e-210 yttB EGP Major facilitator Superfamily
PMPDDMJF_02222 3.2e-13
PMPDDMJF_02223 1.1e-78 tspO T TspO/MBR family
PMPDDMJF_02225 2.9e-78 guaD 3.5.4.12, 3.5.4.3, 3.5.4.33 FJ MafB19-like deaminase
PMPDDMJF_02226 1e-173 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
PMPDDMJF_02227 6.6e-231 wbbX GT2,GT4 M Glycosyl transferases group 1
PMPDDMJF_02228 3e-43 yttA 2.7.13.3 S Pfam Transposase IS66
PMPDDMJF_02229 1.6e-149 F DNA/RNA non-specific endonuclease
PMPDDMJF_02231 8.6e-47 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
PMPDDMJF_02232 1.3e-134 S Domain of unknown function DUF1829
PMPDDMJF_02233 5.6e-258 pgi 5.3.1.9 G Belongs to the GPI family
PMPDDMJF_02234 5.9e-152 glcU U sugar transport
PMPDDMJF_02235 1.4e-110 vanZ V VanZ like family
PMPDDMJF_02236 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMPDDMJF_02237 5.2e-104
PMPDDMJF_02238 8e-105
PMPDDMJF_02239 1.8e-245 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PMPDDMJF_02240 1.9e-203 purK2 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PMPDDMJF_02241 8.9e-240 pbuX F xanthine permease
PMPDDMJF_02242 1.4e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PMPDDMJF_02243 1.9e-115 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PMPDDMJF_02244 1.2e-82 yvbK 3.1.3.25 K GNAT family
PMPDDMJF_02245 7.9e-31 cspC K Cold shock protein
PMPDDMJF_02246 6.6e-168 yqjA S Putative aromatic acid exporter C-terminal domain
PMPDDMJF_02247 2.7e-77
PMPDDMJF_02248 6.2e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PMPDDMJF_02249 0.0 S Psort location CytoplasmicMembrane, score
PMPDDMJF_02250 2.3e-125 WQ51_05710 S Mitochondrial biogenesis AIM24
PMPDDMJF_02251 3e-71 FG Scavenger mRNA decapping enzyme C-term binding
PMPDDMJF_02252 0.0 asnB 6.3.5.4 E Asparagine synthase
PMPDDMJF_02254 5e-134 S ABC-2 family transporter protein
PMPDDMJF_02255 1.4e-133 S ABC transporter
PMPDDMJF_02256 3.9e-26 S Protein of unknown function (DUF2785)
PMPDDMJF_02257 7.7e-100
PMPDDMJF_02258 1.6e-52
PMPDDMJF_02260 1.2e-62
PMPDDMJF_02261 9.9e-62 S MucBP domain
PMPDDMJF_02262 2.1e-102 ywnB S NAD(P)H-binding
PMPDDMJF_02265 1.1e-122 E lipolytic protein G-D-S-L family
PMPDDMJF_02266 9.4e-70 feoA P FeoA
PMPDDMJF_02267 9.5e-22 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PMPDDMJF_02269 1.3e-284 pipD E Dipeptidase
PMPDDMJF_02270 3.1e-105 S Membrane
PMPDDMJF_02271 6.2e-103
PMPDDMJF_02272 2.3e-102 yncA 2.3.1.79 S Maltose acetyltransferase
PMPDDMJF_02273 3.8e-54 S Enterocin A Immunity
PMPDDMJF_02275 2.9e-54
PMPDDMJF_02277 1e-142 S CAAX protease self-immunity
PMPDDMJF_02278 2.9e-274 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PMPDDMJF_02279 1.7e-176 proV E ABC transporter, ATP-binding protein
PMPDDMJF_02280 7.3e-250 gshR 1.8.1.7 C Glutathione reductase
PMPDDMJF_02281 4.8e-94 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
PMPDDMJF_02282 3.5e-219 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PMPDDMJF_02283 1.1e-169 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PMPDDMJF_02284 1.1e-23 L 4.5 Transposon and IS
PMPDDMJF_02285 2.2e-75 K Copper transport repressor CopY TcrY
PMPDDMJF_02286 0.0 copB 3.6.3.4 P E1-E2 ATPase
PMPDDMJF_02287 3e-38 mdt(A) EGP Major facilitator Superfamily
PMPDDMJF_02290 5.6e-128 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PMPDDMJF_02291 1.2e-256 repE K Primase C terminal 1 (PriCT-1)
PMPDDMJF_02292 2e-41 S Phospholipase A2
PMPDDMJF_02294 4e-68 K Tetracyclin repressor, C-terminal all-alpha domain
PMPDDMJF_02295 7.7e-60 V ABC-2 type transporter
PMPDDMJF_02296 1.5e-10 V ABC-2 type transporter
PMPDDMJF_02297 1.4e-58 P ABC-2 family transporter protein
PMPDDMJF_02298 2e-88 Q Methyltransferase
PMPDDMJF_02299 4.4e-52 sugE U Multidrug resistance protein
PMPDDMJF_02300 9.5e-135 S -acetyltransferase
PMPDDMJF_02301 4.7e-93 MA20_25245 K FR47-like protein
PMPDDMJF_02302 6.4e-93 hisB 2.7.7.71, 3.1.3.15, 3.1.3.82, 3.1.3.83, 4.2.1.19, 5.3.1.28, 6.3.2.10 GT9 E HAD-hyrolase-like
PMPDDMJF_02303 2.3e-125 1.1.1.1 C nadph quinone reductase
PMPDDMJF_02304 1.7e-54 1.1.1.1 C nadph quinone reductase
PMPDDMJF_02305 8.6e-139 wzb 3.1.3.48 T Tyrosine phosphatase family
PMPDDMJF_02306 4.5e-86 K Acetyltransferase (GNAT) domain
PMPDDMJF_02307 9e-83 yiaC K Acetyltransferase (GNAT) domain
PMPDDMJF_02308 1.2e-74 2.3.1.82 K Acetyltransferase (GNAT) domain
PMPDDMJF_02309 1.8e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PMPDDMJF_02310 4.1e-198 ybiR P Citrate transporter
PMPDDMJF_02311 2.1e-69
PMPDDMJF_02312 7.6e-255 E Peptidase dimerisation domain
PMPDDMJF_02313 1.3e-298 E ABC transporter, substratebinding protein
PMPDDMJF_02314 1e-101
PMPDDMJF_02315 0.0 cadA P P-type ATPase
PMPDDMJF_02316 2.3e-75 hsp3 O Belongs to the small heat shock protein (HSP20) family
PMPDDMJF_02317 4.1e-71 S Iron-sulphur cluster biosynthesis
PMPDDMJF_02318 4.3e-210 htrA 3.4.21.107 O serine protease
PMPDDMJF_02319 1.2e-154 vicX 3.1.26.11 S domain protein
PMPDDMJF_02320 3.1e-139 yycI S YycH protein
PMPDDMJF_02321 1.1e-254 yycH S YycH protein
PMPDDMJF_02322 0.0 vicK 2.7.13.3 T Histidine kinase
PMPDDMJF_02323 8.1e-131 K response regulator
PMPDDMJF_02324 1.5e-121 3.1.1.24 S Alpha/beta hydrolase family
PMPDDMJF_02325 3.5e-258 arpJ P ABC transporter permease
PMPDDMJF_02326 3.7e-232 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PMPDDMJF_02327 2.4e-264 argH 4.3.2.1 E argininosuccinate lyase
PMPDDMJF_02328 3.1e-214 S Bacterial protein of unknown function (DUF871)
PMPDDMJF_02329 4.6e-73 S Domain of unknown function (DUF3284)
PMPDDMJF_02330 3.6e-228 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMPDDMJF_02331 1.5e-129 K UTRA
PMPDDMJF_02332 2.3e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PMPDDMJF_02333 2.4e-53 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PMPDDMJF_02334 1.2e-105 speG J Acetyltransferase (GNAT) domain
PMPDDMJF_02335 1.7e-84 F NUDIX domain
PMPDDMJF_02336 1.9e-89 S AAA domain
PMPDDMJF_02337 2.3e-113 ycaC Q Isochorismatase family
PMPDDMJF_02338 7.8e-242 ydiC1 EGP Major Facilitator Superfamily
PMPDDMJF_02339 2.2e-213 yeaN P Transporter, major facilitator family protein
PMPDDMJF_02340 1.6e-171 iolS C Aldo keto reductase
PMPDDMJF_02341 3.4e-64 manO S Domain of unknown function (DUF956)
PMPDDMJF_02342 9.6e-169 manN G system, mannose fructose sorbose family IID component
PMPDDMJF_02343 1.9e-120 manY G PTS system
PMPDDMJF_02344 1.4e-181 manL 2.7.1.191, 2.7.1.206 G PTS system sorbose subfamily IIB component
PMPDDMJF_02345 4.5e-217 EGP Major facilitator Superfamily
PMPDDMJF_02346 6.7e-187 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_02347 2.5e-150 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_02348 9.6e-158 K Helix-turn-helix XRE-family like proteins
PMPDDMJF_02350 9e-287 glnP P ABC transporter permease
PMPDDMJF_02351 3.1e-133 glnQ E ABC transporter, ATP-binding protein
PMPDDMJF_02352 3.4e-31
PMPDDMJF_02353 1.7e-218 G Bacterial extracellular solute-binding protein
PMPDDMJF_02354 3.5e-09 G Bacterial extracellular solute-binding protein
PMPDDMJF_02355 2.2e-128 S Protein of unknown function (DUF975)
PMPDDMJF_02356 4.9e-41 yqkB S Iron-sulphur cluster biosynthesis
PMPDDMJF_02357 1e-51
PMPDDMJF_02358 1e-68 S Bacterial PH domain
PMPDDMJF_02359 3.7e-269 ydbT S Bacterial PH domain
PMPDDMJF_02360 9.1e-144 S AAA ATPase domain
PMPDDMJF_02361 4.3e-166 yniA G Phosphotransferase enzyme family
PMPDDMJF_02362 3.4e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMPDDMJF_02363 1.5e-264 glnP P ABC transporter
PMPDDMJF_02364 2.1e-266 glnP P ABC transporter
PMPDDMJF_02365 3.7e-99 ydaF J Acetyltransferase (GNAT) domain
PMPDDMJF_02366 6.7e-105 S Stage II sporulation protein M
PMPDDMJF_02368 1.5e-80 S Uncharacterised protein family (UPF0236)
PMPDDMJF_02369 6e-142 yeaC S ATPase family associated with various cellular activities (AAA)
PMPDDMJF_02370 3e-184 yeaD S Protein of unknown function DUF58
PMPDDMJF_02371 2.3e-306 yebA E Transglutaminase/protease-like homologues
PMPDDMJF_02372 1.1e-214 lsgC M Glycosyl transferases group 1
PMPDDMJF_02373 4.8e-90 maa 2.3.1.79 S Maltose acetyltransferase
PMPDDMJF_02374 2.2e-145 3.1.3.102, 3.1.3.104 G Sucrose-6F-phosphate phosphohydrolase
PMPDDMJF_02375 2.7e-255 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
PMPDDMJF_02376 4.3e-114 S Bacteriocin-protection, YdeI or OmpD-Associated
PMPDDMJF_02377 2.2e-35 yjdF S Protein of unknown function (DUF2992)
PMPDDMJF_02378 1.4e-212 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
PMPDDMJF_02379 4e-224 maeN C 2-hydroxycarboxylate transporter family
PMPDDMJF_02380 1.1e-286 dpiB 2.7.13.3 T Single cache domain 3
PMPDDMJF_02381 1.9e-121 dpiA KT cheY-homologous receiver domain
PMPDDMJF_02382 4.8e-35 1.1.1.31 I NAD binding domain of 6-phosphogluconate dehydrogenase
PMPDDMJF_02383 3e-96 1.1.1.31 I NAD binding domain of 6-phosphogluconate dehydrogenase
PMPDDMJF_02384 4.4e-94 M1-431 S Protein of unknown function (DUF1706)
PMPDDMJF_02385 7.7e-25
PMPDDMJF_02386 6.9e-221 yagE E Amino acid permease
PMPDDMJF_02387 8e-171 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
PMPDDMJF_02388 8.7e-225 ptsG G phosphotransferase system
PMPDDMJF_02389 4.5e-40 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMPDDMJF_02390 2.3e-18 S EpsG family
PMPDDMJF_02391 2.5e-55 GT2 M group 2 family protein
PMPDDMJF_02392 9.3e-80 wbbL S Glycosyltransferase like family 2
PMPDDMJF_02393 5.1e-69 rfbP M Bacterial sugar transferase
PMPDDMJF_02394 9.2e-270 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
PMPDDMJF_02395 0.0 O Belongs to the peptidase S8 family
PMPDDMJF_02396 3.4e-95 O Belongs to the peptidase S8 family
PMPDDMJF_02397 7.9e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PMPDDMJF_02398 5.7e-61 yeaO S Protein of unknown function, DUF488
PMPDDMJF_02399 1.3e-173 corA P CorA-like Mg2+ transporter protein
PMPDDMJF_02400 1.6e-189 ybiR P Citrate transporter
PMPDDMJF_02401 1.3e-35 S Protein of unknown function (DUF1722)
PMPDDMJF_02402 1.2e-30 L Uncharacterised protein family (UPF0236)
PMPDDMJF_02403 1e-12 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
PMPDDMJF_02404 0.0 dld 1.1.5.12 C D-lactate dehydrogenase, membrane binding
PMPDDMJF_02406 6.3e-159
PMPDDMJF_02407 1.4e-49
PMPDDMJF_02408 3.1e-56
PMPDDMJF_02409 3e-116 K CAT RNA binding domain
PMPDDMJF_02410 1.3e-75 S Metallo-beta-lactamase superfamily
PMPDDMJF_02411 1.8e-66 M Glycosyl transferases group 1
PMPDDMJF_02412 1.4e-48 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PMPDDMJF_02413 1.4e-98 GM NAD(P)H-binding
PMPDDMJF_02414 1.8e-151 2.3.1.128 K Acetyltransferase (GNAT) domain
PMPDDMJF_02415 7.4e-88 K Acetyltransferase (GNAT) domain
PMPDDMJF_02417 5.5e-63 ligA 2.7.7.7, 6.5.1.2 L EXOIII
PMPDDMJF_02418 1.2e-186 cggR K Putative sugar-binding domain
PMPDDMJF_02419 2.8e-193 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PMPDDMJF_02420 4.4e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PMPDDMJF_02421 7.8e-140 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PMPDDMJF_02422 9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PMPDDMJF_02423 6.7e-229 mdt(A) EGP Major facilitator Superfamily
PMPDDMJF_02424 1.1e-47
PMPDDMJF_02425 1.4e-292 clcA P chloride
PMPDDMJF_02426 2.4e-31 secG U Preprotein translocase
PMPDDMJF_02427 3.8e-139 est 3.1.1.1 S Serine aminopeptidase, S33
PMPDDMJF_02428 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PMPDDMJF_02429 9.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PMPDDMJF_02430 1.3e-176 yvdE K helix_turn _helix lactose operon repressor
PMPDDMJF_02431 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PMPDDMJF_02432 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PMPDDMJF_02433 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PMPDDMJF_02434 3.7e-120 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
PMPDDMJF_02435 4.3e-211 msmX P Belongs to the ABC transporter superfamily
PMPDDMJF_02436 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PMPDDMJF_02437 3.2e-223 malE G Bacterial extracellular solute-binding protein
PMPDDMJF_02438 1.5e-242 malF P Binding-protein-dependent transport system inner membrane component
PMPDDMJF_02439 5.5e-150 malG P ABC transporter permease
PMPDDMJF_02440 1.7e-21
PMPDDMJF_02441 1.6e-22 ydcG K Helix-turn-helix XRE-family like proteins
PMPDDMJF_02442 7.8e-238 YSH1 S Metallo-beta-lactamase superfamily
PMPDDMJF_02443 9.8e-231 malE G Bacterial extracellular solute-binding protein
PMPDDMJF_02444 1.9e-147 malF G Binding-protein-dependent transport system inner membrane component
PMPDDMJF_02445 1.7e-165 malG P ABC-type sugar transport systems, permease components
PMPDDMJF_02446 3.5e-194 malK P ATPases associated with a variety of cellular activities
PMPDDMJF_02447 3.1e-104 3.2.2.20 K Acetyltransferase (GNAT) domain
PMPDDMJF_02448 9e-92 yxjI
PMPDDMJF_02449 3.1e-156 ycsE S Sucrose-6F-phosphate phosphohydrolase
PMPDDMJF_02450 7.3e-129 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PMPDDMJF_02451 6.7e-176 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PMPDDMJF_02452 5e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PMPDDMJF_02454 1.8e-167 natA S ABC transporter, ATP-binding protein
PMPDDMJF_02455 3.6e-214 ysdA CP ABC-2 family transporter protein
PMPDDMJF_02456 2.4e-98 dnaQ 2.7.7.7 L DNA polymerase III
PMPDDMJF_02457 7.5e-151 xth 3.1.11.2 L exodeoxyribonuclease III
PMPDDMJF_02458 2.4e-167 murB 1.3.1.98 M Cell wall formation
PMPDDMJF_02459 0.0 yjcE P Sodium proton antiporter
PMPDDMJF_02460 2.9e-96 puuR K Cupin domain
PMPDDMJF_02461 1e-204 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PMPDDMJF_02462 5.5e-147 potB P ABC transporter permease
PMPDDMJF_02463 1.2e-141 potC P ABC transporter permease
PMPDDMJF_02464 2.3e-206 potD P ABC transporter
PMPDDMJF_02466 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PMPDDMJF_02467 7.2e-110 K Transcriptional regulator
PMPDDMJF_02468 2.5e-182 V ABC transporter
PMPDDMJF_02469 2.3e-128 V AAA domain, putative AbiEii toxin, Type IV TA system
PMPDDMJF_02470 2.2e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PMPDDMJF_02471 2.2e-164 ybbR S YbbR-like protein
PMPDDMJF_02472 2.6e-255 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PMPDDMJF_02473 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PMPDDMJF_02475 0.0 pepF2 E Oligopeptidase F
PMPDDMJF_02476 1.5e-78 S VanZ like family
PMPDDMJF_02477 7.6e-132 yebC K Transcriptional regulatory protein
PMPDDMJF_02478 2.7e-152 comGA NU Type II IV secretion system protein
PMPDDMJF_02479 6.9e-170 comGB NU type II secretion system
PMPDDMJF_02480 2.5e-26
PMPDDMJF_02482 2.5e-23
PMPDDMJF_02483 1.9e-19
PMPDDMJF_02484 9.7e-10
PMPDDMJF_02485 8.1e-185 ytxK 2.1.1.72 L N-6 DNA Methylase
PMPDDMJF_02486 5.4e-51
PMPDDMJF_02487 2.4e-256 cycA E Amino acid permease
PMPDDMJF_02488 6.7e-147 arbV 2.3.1.51 I Phosphate acyltransferases
PMPDDMJF_02489 2.5e-163 arbx M Glycosyl transferase family 8
PMPDDMJF_02490 3.6e-182 arbY M family 8
PMPDDMJF_02491 2.8e-165 arbZ I Phosphate acyltransferases
PMPDDMJF_02492 0.0 rafA 3.2.1.22 G alpha-galactosidase
PMPDDMJF_02495 5.8e-70 S SdpI/YhfL protein family
PMPDDMJF_02496 2.1e-134 K response regulator
PMPDDMJF_02497 2.9e-271 T PhoQ Sensor
PMPDDMJF_02498 3.6e-75 yhbS S acetyltransferase
PMPDDMJF_02499 5.3e-14
PMPDDMJF_02500 3.3e-46 S Glycosyltransferase like family 2
PMPDDMJF_02501 3.5e-77 cps1B GT2,GT4 M Glycosyl transferases group 1
PMPDDMJF_02502 2.8e-67 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PMPDDMJF_02503 6.1e-77 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PMPDDMJF_02505 4e-27
PMPDDMJF_02506 1.8e-62 L IS66 Orf2 like protein
PMPDDMJF_02507 2.7e-293 L Transposase IS66 family
PMPDDMJF_02509 2.9e-16
PMPDDMJF_02510 2.2e-14 ytgB S Transglycosylase associated protein
PMPDDMJF_02512 4.9e-38 L Transposase and inactivated derivatives
PMPDDMJF_02513 3.1e-248 G MFS/sugar transport protein
PMPDDMJF_02514 2.8e-72 cpsE M Bacterial sugar transferase
PMPDDMJF_02516 1.7e-215 L Transposase DDE domain group 1
PMPDDMJF_02517 9.7e-269 L Transposase DDE domain
PMPDDMJF_02518 9.3e-70 yqeB S Pyrimidine dimer DNA glycosylase
PMPDDMJF_02519 1.7e-69 pdxH S Pyridoxamine 5'-phosphate oxidase
PMPDDMJF_02520 3.6e-82 C Flavodoxin
PMPDDMJF_02521 8.1e-196 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PMPDDMJF_02522 4.9e-114 GM NmrA-like family
PMPDDMJF_02524 5.8e-100 Q methyltransferase
PMPDDMJF_02525 3.4e-90 T Sh3 type 3 domain protein
PMPDDMJF_02526 6.2e-119 yfeJ 6.3.5.2 F glutamine amidotransferase
PMPDDMJF_02527 1.2e-132 S Uncharacterized protein conserved in bacteria (DUF2263)
PMPDDMJF_02528 5.3e-259 yhdP S Transporter associated domain
PMPDDMJF_02529 1e-257 lmrB EGP Major facilitator Superfamily
PMPDDMJF_02530 2.8e-61 S Domain of unknown function (DUF4811)
PMPDDMJF_02531 1.1e-98 maf D nucleoside-triphosphate diphosphatase activity
PMPDDMJF_02532 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PMPDDMJF_02533 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PMPDDMJF_02534 0.0 ydaO E amino acid
PMPDDMJF_02535 2.4e-56 S Domain of unknown function (DUF1827)
PMPDDMJF_02536 1e-293 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PMPDDMJF_02537 6.7e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PMPDDMJF_02538 1.9e-110 S CAAX protease self-immunity
PMPDDMJF_02539 2.4e-195 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMPDDMJF_02540 1.8e-184
PMPDDMJF_02541 2.6e-158 ytrB V ABC transporter
PMPDDMJF_02542 2.7e-61 ytrA K helix_turn_helix gluconate operon transcriptional repressor
PMPDDMJF_02543 7.2e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PMPDDMJF_02544 0.0 uup S ABC transporter, ATP-binding protein
PMPDDMJF_02545 3.9e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PMPDDMJF_02546 4.2e-189 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PMPDDMJF_02547 3.6e-99 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PMPDDMJF_02548 5.3e-130 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PMPDDMJF_02549 4.6e-74
PMPDDMJF_02550 3.3e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
PMPDDMJF_02551 2e-180 ansA 3.5.1.1 EJ Asparaginase
PMPDDMJF_02552 8.7e-144 fat 3.1.2.21 I Acyl-ACP thioesterase
PMPDDMJF_02553 2.2e-143 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PMPDDMJF_02554 2.2e-57 yabA L Involved in initiation control of chromosome replication
PMPDDMJF_02555 5.8e-172 holB 2.7.7.7 L DNA polymerase III
PMPDDMJF_02556 4.6e-52 yaaQ S Cyclic-di-AMP receptor
PMPDDMJF_02557 5.1e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PMPDDMJF_02558 5.8e-34 S Protein of unknown function (DUF2508)
PMPDDMJF_02559 4.8e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PMPDDMJF_02560 8.4e-32 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PMPDDMJF_02561 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMPDDMJF_02562 2.5e-89 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PMPDDMJF_02563 5.6e-50
PMPDDMJF_02564 5.3e-107 rsmC 2.1.1.172 J Methyltransferase
PMPDDMJF_02565 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PMPDDMJF_02566 1.8e-45
PMPDDMJF_02567 2.2e-176 ccpB 5.1.1.1 K lacI family
PMPDDMJF_02568 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
PMPDDMJF_02569 1.6e-155 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PMPDDMJF_02570 6.9e-85 M Bacteriophage peptidoglycan hydrolase
PMPDDMJF_02571 1.9e-42 hol S Bacteriophage holin
PMPDDMJF_02572 1.1e-46
PMPDDMJF_02574 1.2e-26
PMPDDMJF_02575 0.0 S cellulase activity
PMPDDMJF_02576 2.4e-286 S Phage tail protein
PMPDDMJF_02577 2e-279 S phage tail tape measure protein
PMPDDMJF_02578 3.1e-54
PMPDDMJF_02579 8.1e-49 S Phage tail assembly chaperone protein, TAC
PMPDDMJF_02580 1.6e-95 S Phage tail tube protein
PMPDDMJF_02581 7.8e-70 S Protein of unknown function (DUF3168)
PMPDDMJF_02582 3.7e-55 S Bacteriophage HK97-gp10, putative tail-component
PMPDDMJF_02583 3.8e-49
PMPDDMJF_02584 1.7e-55 S Phage gp6-like head-tail connector protein
PMPDDMJF_02585 7.9e-144
PMPDDMJF_02586 3.3e-108
PMPDDMJF_02587 1.9e-18 S Domain of unknown function (DUF4355)
PMPDDMJF_02589 2.6e-60 S Phage Mu protein F like protein
PMPDDMJF_02590 4.2e-177 S Phage portal protein, SPP1 Gp6-like
PMPDDMJF_02591 6.5e-179 S Phage terminase large subunit
PMPDDMJF_02592 5.1e-64 ps333 L Terminase small subunit
PMPDDMJF_02595 2.2e-218 S GcrA cell cycle regulator
PMPDDMJF_02597 7.9e-09 S Super-infection exclusion protein B

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)