ORF_ID e_value Gene_name EC_number CAZy COGs Description
CLDPABDG_00002 9.6e-117 S Psort location Cytoplasmic, score
CLDPABDG_00003 7.3e-115
CLDPABDG_00004 1e-113 S phage tail tape measure protein
CLDPABDG_00006 2.2e-58
CLDPABDG_00007 3.2e-105
CLDPABDG_00008 1.3e-61
CLDPABDG_00009 4.7e-35
CLDPABDG_00010 1.5e-44
CLDPABDG_00011 2.5e-65 S Phage protein Gp19/Gp15/Gp42
CLDPABDG_00012 4.1e-124 S Phage capsid family
CLDPABDG_00013 1e-21
CLDPABDG_00014 4.5e-09
CLDPABDG_00015 2.8e-98
CLDPABDG_00016 1.4e-183 S Phage portal protein, SPP1 Gp6-like
CLDPABDG_00017 4.8e-263 S Terminase
CLDPABDG_00018 1.6e-57
CLDPABDG_00019 9.2e-53 V HNH nucleases
CLDPABDG_00020 2.4e-153 J tRNA 5'-leader removal
CLDPABDG_00021 7.1e-19 msi109 K Helix-turn-helix domain
CLDPABDG_00023 3.5e-47
CLDPABDG_00032 6.5e-70 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
CLDPABDG_00033 2.6e-49 V HNH endonuclease
CLDPABDG_00035 1.2e-173 K ParB-like nuclease domain
CLDPABDG_00036 1.4e-08 S Helix-turn-helix domain
CLDPABDG_00037 1.1e-46
CLDPABDG_00038 1.2e-63 ssb1 L single-stranded DNA-binding protein
CLDPABDG_00042 2.6e-20
CLDPABDG_00044 1.9e-10
CLDPABDG_00045 9.3e-32
CLDPABDG_00046 2.3e-60
CLDPABDG_00047 1.8e-66
CLDPABDG_00048 4.2e-138 L Phage integrase family
CLDPABDG_00050 1.4e-212 ykiI
CLDPABDG_00051 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CLDPABDG_00052 1.5e-123 3.6.1.13 L NUDIX domain
CLDPABDG_00053 4.9e-173 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
CLDPABDG_00054 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CLDPABDG_00055 9.4e-101 pdtaR T Response regulator receiver domain protein
CLDPABDG_00056 1.3e-159 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
CLDPABDG_00057 1.4e-106 L Belongs to the 'phage' integrase family
CLDPABDG_00058 8.2e-39 3.1.21.3 L Type I restriction modification DNA specificity domain
CLDPABDG_00059 2.2e-75 hsdS 3.1.21.3 L Type I restriction modification DNA specificity domain
CLDPABDG_00060 8e-245 hsdM 2.1.1.72 V HsdM N-terminal domain
CLDPABDG_00061 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
CLDPABDG_00062 5.1e-37 pcrA1 3.6.4.12 F DNA helicase
CLDPABDG_00063 1.6e-101 E Binding-protein-dependent transport system inner membrane component
CLDPABDG_00064 8.9e-121 tcyA ET Bacterial periplasmic substrate-binding proteins
CLDPABDG_00065 9.4e-115 3.6.3.21 E ATPases associated with a variety of cellular activities
CLDPABDG_00066 1e-194 metC 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CLDPABDG_00068 2.9e-18 relB L RelB antitoxin
CLDPABDG_00070 2.3e-273 pyk 2.7.1.40 G Pyruvate kinase
CLDPABDG_00071 5.7e-85 K Cro/C1-type HTH DNA-binding domain
CLDPABDG_00072 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
CLDPABDG_00073 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CLDPABDG_00074 1.7e-125 S Short repeat of unknown function (DUF308)
CLDPABDG_00075 1.3e-48 S Antitoxin component of a toxin-antitoxin (TA) module
CLDPABDG_00076 3.4e-55 DJ Addiction module toxin, RelE StbE family
CLDPABDG_00077 4.5e-13 S Psort location Extracellular, score 8.82
CLDPABDG_00078 1.7e-232 EGP Major facilitator Superfamily
CLDPABDG_00079 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLDPABDG_00080 2e-269 KLT Domain of unknown function (DUF4032)
CLDPABDG_00081 1.6e-210 ugpC E Belongs to the ABC transporter superfamily
CLDPABDG_00082 2.8e-131 K LytTr DNA-binding domain
CLDPABDG_00083 2.7e-234 T GHKL domain
CLDPABDG_00084 1.2e-51
CLDPABDG_00085 5.9e-215 clcA_2 P Voltage gated chloride channel
CLDPABDG_00086 3.8e-179 S Psort location Cytoplasmic, score
CLDPABDG_00087 1.3e-72 S GtrA-like protein
CLDPABDG_00088 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
CLDPABDG_00089 9.8e-121 ybjG 3.6.1.27 I Psort location CytoplasmicMembrane, score
CLDPABDG_00090 2.4e-80 ypeA 2.3.1.1 K Psort location Cytoplasmic, score 8.87
CLDPABDG_00091 1.1e-113 vex2 V ABC transporter, ATP-binding protein
CLDPABDG_00092 4.7e-211 vex1 V Efflux ABC transporter, permease protein
CLDPABDG_00093 1.5e-242 vex3 V ABC transporter permease
CLDPABDG_00094 6.3e-266 lacS G Psort location CytoplasmicMembrane, score 10.00
CLDPABDG_00095 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CLDPABDG_00096 2.7e-188 lacR K Transcriptional regulator, LacI family
CLDPABDG_00097 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
CLDPABDG_00098 4e-167 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
CLDPABDG_00099 4.3e-160 S Amidohydrolase
CLDPABDG_00100 5.8e-146 IQ KR domain
CLDPABDG_00101 5.2e-245 4.2.1.68 M Enolase C-terminal domain-like
CLDPABDG_00102 4.4e-266 G Bacterial extracellular solute-binding protein
CLDPABDG_00103 3.3e-175 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_00104 5.3e-156 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_00105 2.7e-191 K Bacterial regulatory proteins, lacI family
CLDPABDG_00106 2.3e-53 lacZ5 3.2.1.23 G beta-galactosidase activity
CLDPABDG_00107 1.2e-263 G Bacterial extracellular solute-binding protein
CLDPABDG_00108 2.2e-169 K helix_turn _helix lactose operon repressor
CLDPABDG_00109 8.3e-110 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
CLDPABDG_00110 3e-13 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
CLDPABDG_00111 5.8e-82 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
CLDPABDG_00112 4.1e-188 EGP Major facilitator Superfamily
CLDPABDG_00114 1.7e-55
CLDPABDG_00115 2.1e-294 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
CLDPABDG_00116 4.8e-59
CLDPABDG_00117 6.4e-257 S AAA domain
CLDPABDG_00118 1.7e-189 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
CLDPABDG_00119 4.5e-78 S enterobacterial common antigen metabolic process
CLDPABDG_00120 2.2e-128 mprF S Lysylphosphatidylglycerol synthase TM region
CLDPABDG_00121 1.5e-163 M Glycosyl transferases group 1
CLDPABDG_00122 2.1e-158 M Glycosyl transferase family 2
CLDPABDG_00123 6e-92
CLDPABDG_00124 0.0 wbbM M Glycosyl transferase family 8
CLDPABDG_00125 2e-100 M Glycosyltransferase like family 2
CLDPABDG_00126 4.8e-223 GT2,GT4 M Glycosyl transferase family 2
CLDPABDG_00127 1.6e-201 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
CLDPABDG_00128 3.3e-123 rgpC U Transport permease protein
CLDPABDG_00129 2.5e-127
CLDPABDG_00130 2.8e-308 GT2,GT4 M Glycosyl transferase family 2
CLDPABDG_00131 0.0 wbbM M Glycosyl transferase family 8
CLDPABDG_00132 2.2e-157 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CLDPABDG_00133 3.9e-53 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CLDPABDG_00134 5e-166 G ABC transporter permease
CLDPABDG_00135 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CLDPABDG_00136 8.9e-198 K helix_turn _helix lactose operon repressor
CLDPABDG_00137 1.1e-240 mntH P H( )-stimulated, divalent metal cation uptake system
CLDPABDG_00138 9.3e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
CLDPABDG_00139 6.2e-127 L Protein of unknown function (DUF1524)
CLDPABDG_00140 2.9e-243 T Diguanylate cyclase (GGDEF) domain protein
CLDPABDG_00141 4.7e-285 EGP Major facilitator Superfamily
CLDPABDG_00142 7.4e-47
CLDPABDG_00143 1.3e-182 S Endonuclease/Exonuclease/phosphatase family
CLDPABDG_00144 4.1e-86 3.1.3.48 T Low molecular weight phosphatase family
CLDPABDG_00145 1.8e-222 pflA S Protein of unknown function (DUF4012)
CLDPABDG_00146 1.9e-190 wcoI DM Psort location CytoplasmicMembrane, score
CLDPABDG_00147 1.2e-20
CLDPABDG_00148 8e-105
CLDPABDG_00150 4.5e-50 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
CLDPABDG_00151 4.7e-45 L Psort location Cytoplasmic, score 8.87
CLDPABDG_00152 3.3e-36 L Integrase core domain
CLDPABDG_00153 9.2e-247 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
CLDPABDG_00154 6.9e-156 G Binding-protein-dependent transport system inner membrane component
CLDPABDG_00155 6.6e-157 G Binding-protein-dependent transport system inner membrane component
CLDPABDG_00156 5.8e-244 msmE7 G Bacterial extracellular solute-binding protein
CLDPABDG_00157 1.5e-230 nagC GK ROK family
CLDPABDG_00158 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
CLDPABDG_00159 4.1e-77 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CLDPABDG_00160 0.0 yjcE P Sodium/hydrogen exchanger family
CLDPABDG_00161 9.4e-152 ypfH S Phospholipase/Carboxylesterase
CLDPABDG_00162 4e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
CLDPABDG_00163 9.9e-19 L PFAM Integrase catalytic
CLDPABDG_00164 2.2e-183 rbsR K helix_turn _helix lactose operon repressor
CLDPABDG_00165 7.4e-239 malE G Bacterial extracellular solute-binding protein
CLDPABDG_00166 1.9e-164 U Binding-protein-dependent transport system inner membrane component
CLDPABDG_00167 3e-159 U Binding-protein-dependent transport system inner membrane component
CLDPABDG_00168 1.8e-239 bglA 3.2.1.21 G Glycosyl hydrolase family 1
CLDPABDG_00169 2.9e-61 ET Bacterial periplasmic substrate-binding proteins
CLDPABDG_00170 2.5e-107 odh 1.5.1.28 I glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CLDPABDG_00171 6.2e-73 3.6.3.21 E ABC transporter
CLDPABDG_00172 1.9e-36 E Binding-protein-dependent transport system inner membrane component
CLDPABDG_00173 2.3e-37 yxeN P amino acid ABC transporter
CLDPABDG_00174 1.3e-198 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CLDPABDG_00175 7.2e-203 cps2J S Polysaccharide biosynthesis protein
CLDPABDG_00176 4.5e-284 menD 2.2.1.9 H Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CLDPABDG_00177 2.6e-123 IQ Enoyl-(Acyl carrier protein) reductase
CLDPABDG_00178 2.9e-173 S slime layer polysaccharide biosynthetic process
CLDPABDG_00179 8.8e-51
CLDPABDG_00180 3.4e-76 GT2 M Glycosyl transferase, group 2 family protein
CLDPABDG_00181 3.2e-185 rgpAc GT4 M Domain of unknown function (DUF1972)
CLDPABDG_00182 3.9e-38 L Transposase
CLDPABDG_00183 5.9e-108 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
CLDPABDG_00184 0.0 trxB1 1.8.1.9 C Thioredoxin domain
CLDPABDG_00185 3.8e-12 S Psort location Extracellular, score 8.82
CLDPABDG_00186 8.7e-13 G ABC transporter permease
CLDPABDG_00187 5.8e-151 G ABC transporter permease
CLDPABDG_00188 6.6e-175 I alpha/beta hydrolase fold
CLDPABDG_00190 1.2e-145 cobB2 K Sir2 family
CLDPABDG_00191 4.1e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
CLDPABDG_00192 1.2e-49 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
CLDPABDG_00193 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
CLDPABDG_00194 0.0 KLT Protein tyrosine kinase
CLDPABDG_00195 7.5e-151 O Thioredoxin
CLDPABDG_00197 4e-196 S G5
CLDPABDG_00198 7.8e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CLDPABDG_00199 3.3e-169 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CLDPABDG_00200 2.6e-109 S LytR cell envelope-related transcriptional attenuator
CLDPABDG_00201 1.7e-284 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
CLDPABDG_00202 6.3e-122 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
CLDPABDG_00203 0.0 M Conserved repeat domain
CLDPABDG_00204 7.8e-305 murJ KLT MviN-like protein
CLDPABDG_00205 0.0 murJ KLT MviN-like protein
CLDPABDG_00206 2e-12 S Domain of unknown function (DUF4143)
CLDPABDG_00207 1.4e-121 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
CLDPABDG_00209 9.1e-14 S Psort location Extracellular, score 8.82
CLDPABDG_00210 1.6e-180 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CLDPABDG_00211 4.4e-202 parB K Belongs to the ParB family
CLDPABDG_00212 4.5e-172 parA D CobQ CobB MinD ParA nucleotide binding domain protein
CLDPABDG_00213 1.2e-127 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
CLDPABDG_00214 8e-91 jag S Putative single-stranded nucleic acids-binding domain
CLDPABDG_00215 3.9e-190 yidC U Membrane protein insertase, YidC Oxa1 family
CLDPABDG_00216 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
CLDPABDG_00217 2.9e-306 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CLDPABDG_00218 1e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CLDPABDG_00219 6.3e-235 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CLDPABDG_00220 6.2e-90 S Protein of unknown function (DUF721)
CLDPABDG_00221 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLDPABDG_00222 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLDPABDG_00223 3.3e-68 S Transmembrane domain of unknown function (DUF3566)
CLDPABDG_00224 1.2e-260 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
CLDPABDG_00225 2.9e-58 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CLDPABDG_00229 4e-95 S Protein of unknown function DUF45
CLDPABDG_00230 3.4e-188 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
CLDPABDG_00231 5.2e-240 ytfL P Transporter associated domain
CLDPABDG_00232 5.3e-119 cah 4.2.1.1 P Reversible hydration of carbon dioxide
CLDPABDG_00233 1.6e-37
CLDPABDG_00234 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CLDPABDG_00235 0.0 yjjP S Threonine/Serine exporter, ThrE
CLDPABDG_00236 9.4e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CLDPABDG_00237 5.9e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLDPABDG_00238 1.4e-41 S Protein of unknown function (DUF3073)
CLDPABDG_00239 8.2e-63 I Sterol carrier protein
CLDPABDG_00240 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
CLDPABDG_00241 1.9e-33
CLDPABDG_00242 3.1e-147 gluP 3.4.21.105 S Rhomboid family
CLDPABDG_00243 4.3e-240 L ribosomal rna small subunit methyltransferase
CLDPABDG_00244 3.1e-57 crgA D Involved in cell division
CLDPABDG_00245 2e-141 S Bacterial protein of unknown function (DUF881)
CLDPABDG_00246 7.4e-208 srtA 3.4.22.70 M Sortase family
CLDPABDG_00247 1.1e-118 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
CLDPABDG_00248 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
CLDPABDG_00249 5.8e-177 T Protein tyrosine kinase
CLDPABDG_00250 5.2e-265 pbpA M penicillin-binding protein
CLDPABDG_00251 9.1e-260 rodA D Belongs to the SEDS family
CLDPABDG_00252 6.8e-242 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
CLDPABDG_00253 9.6e-73 fhaB T Inner membrane component of T3SS, cytoplasmic domain
CLDPABDG_00254 1.2e-131 fhaA T Protein of unknown function (DUF2662)
CLDPABDG_00255 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
CLDPABDG_00256 9.5e-223 2.7.13.3 T Histidine kinase
CLDPABDG_00257 8.7e-111 K helix_turn_helix, Lux Regulon
CLDPABDG_00258 2.3e-193 pldB 3.1.1.5 I Serine aminopeptidase, S33
CLDPABDG_00259 5.7e-159 yicL EG EamA-like transporter family
CLDPABDG_00261 4.7e-268 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
CLDPABDG_00262 9.4e-286 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
CLDPABDG_00263 0.0 cadA P E1-E2 ATPase
CLDPABDG_00264 7.9e-188 ansA 3.5.1.1 EJ Asparaginase
CLDPABDG_00265 3.1e-270 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
CLDPABDG_00266 3.6e-162 htpX O Belongs to the peptidase M48B family
CLDPABDG_00268 4.6e-64 K Helix-turn-helix XRE-family like proteins
CLDPABDG_00269 2.4e-170 yddG EG EamA-like transporter family
CLDPABDG_00270 0.0 pip S YhgE Pip domain protein
CLDPABDG_00271 0.0 pip S YhgE Pip domain protein
CLDPABDG_00272 5.9e-205 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
CLDPABDG_00273 6e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CLDPABDG_00274 4.2e-297 clcA P Voltage gated chloride channel
CLDPABDG_00275 5.5e-151 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLDPABDG_00276 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLDPABDG_00277 1.4e-29 E Receptor family ligand binding region
CLDPABDG_00278 1.1e-195 K helix_turn _helix lactose operon repressor
CLDPABDG_00279 4.5e-296 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
CLDPABDG_00280 1.5e-115 S Protein of unknown function, DUF624
CLDPABDG_00281 0.0 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
CLDPABDG_00282 3e-224 G Bacterial extracellular solute-binding protein
CLDPABDG_00283 2.2e-162 amyD3 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_00284 1.6e-149 amyC5 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_00285 9e-279 scrT G Transporter major facilitator family protein
CLDPABDG_00286 3.5e-252 yhjE EGP Sugar (and other) transporter
CLDPABDG_00287 1.8e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CLDPABDG_00288 4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CLDPABDG_00289 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
CLDPABDG_00290 4.9e-39 G beta-mannosidase
CLDPABDG_00291 2.5e-189 K helix_turn _helix lactose operon repressor
CLDPABDG_00292 8.3e-12 S Protein of unknown function, DUF624
CLDPABDG_00293 4.1e-270 aroP E aromatic amino acid transport protein AroP K03293
CLDPABDG_00294 0.0 V FtsX-like permease family
CLDPABDG_00295 3.3e-227 P Sodium/hydrogen exchanger family
CLDPABDG_00296 1.3e-76 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00297 1.2e-173 3.4.22.70 M Sortase family
CLDPABDG_00298 4.2e-122 Q von Willebrand factor (vWF) type A domain
CLDPABDG_00299 7.4e-177 M LPXTG cell wall anchor motif
CLDPABDG_00300 3e-87 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00301 9.9e-275 cycA E Amino acid permease
CLDPABDG_00302 1.2e-166 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
CLDPABDG_00303 3.8e-128 thiF 2.7.7.73, 2.7.7.80 H ThiF family
CLDPABDG_00304 3.8e-26 thiS 2.8.1.10 H ThiS family
CLDPABDG_00305 1.8e-182 1.1.1.65 C Aldo/keto reductase family
CLDPABDG_00306 1.9e-57 ydgJ K helix_turn_helix multiple antibiotic resistance protein
CLDPABDG_00307 8.7e-284 lmrA1 V ABC transporter, ATP-binding protein
CLDPABDG_00308 0.0 lmrA2 V ABC transporter transmembrane region
CLDPABDG_00309 1.1e-117 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CLDPABDG_00310 1.3e-236 G MFS/sugar transport protein
CLDPABDG_00311 2.9e-294 efeU_1 P Iron permease FTR1 family
CLDPABDG_00312 1.5e-94 tpd P Fe2+ transport protein
CLDPABDG_00313 1.6e-233 S Predicted membrane protein (DUF2318)
CLDPABDG_00314 8e-220 macB_2 V ABC transporter permease
CLDPABDG_00316 2e-201 Z012_06715 V FtsX-like permease family
CLDPABDG_00317 9e-150 macB V ABC transporter, ATP-binding protein
CLDPABDG_00318 2.6e-63 S FMN_bind
CLDPABDG_00319 7.8e-88 K Psort location Cytoplasmic, score 8.87
CLDPABDG_00320 4.2e-279 pip S YhgE Pip domain protein
CLDPABDG_00321 0.0 pip S YhgE Pip domain protein
CLDPABDG_00322 2.4e-226 S Putative ABC-transporter type IV
CLDPABDG_00323 6e-38 nrdH O Glutaredoxin
CLDPABDG_00324 8.1e-17 M cell wall binding repeat
CLDPABDG_00325 4e-163 M cell wall binding repeat
CLDPABDG_00327 5.8e-305 pepD E Peptidase family C69
CLDPABDG_00328 4e-195 XK27_01805 M Glycosyltransferase like family 2
CLDPABDG_00330 1.1e-107 icaR K Bacterial regulatory proteins, tetR family
CLDPABDG_00332 3.6e-166 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CLDPABDG_00333 1.2e-236 amt U Ammonium Transporter Family
CLDPABDG_00334 1e-54 glnB K Nitrogen regulatory protein P-II
CLDPABDG_00335 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
CLDPABDG_00336 3.3e-248 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
CLDPABDG_00337 1.7e-242 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
CLDPABDG_00338 2.1e-137 cobQ S CobB/CobQ-like glutamine amidotransferase domain
CLDPABDG_00339 1e-27 S granule-associated protein
CLDPABDG_00340 0.0 ubiB S ABC1 family
CLDPABDG_00341 6.3e-193 K Periplasmic binding protein domain
CLDPABDG_00342 1.1e-242 G Bacterial extracellular solute-binding protein
CLDPABDG_00343 3.3e-07 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_00344 3.1e-167 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_00345 9.3e-147 G Binding-protein-dependent transport system inner membrane component
CLDPABDG_00346 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
CLDPABDG_00347 0.0 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
CLDPABDG_00348 0.0 G Bacterial Ig-like domain (group 4)
CLDPABDG_00349 2.3e-206 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
CLDPABDG_00350 2.7e-117 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CLDPABDG_00351 3.9e-91
CLDPABDG_00352 2.8e-221 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
CLDPABDG_00353 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CLDPABDG_00355 1e-139 cpaE D bacterial-type flagellum organization
CLDPABDG_00356 2.7e-185 cpaF U Type II IV secretion system protein
CLDPABDG_00357 3.1e-125 U Type ii secretion system
CLDPABDG_00358 1.9e-89 gspF NU Type II secretion system (T2SS), protein F
CLDPABDG_00359 1.3e-42 S Protein of unknown function (DUF4244)
CLDPABDG_00360 5.1e-60 U TadE-like protein
CLDPABDG_00361 4.7e-56 S TIGRFAM helicase secretion neighborhood TadE-like protein
CLDPABDG_00362 4.9e-218 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
CLDPABDG_00363 4.2e-194 S Psort location CytoplasmicMembrane, score
CLDPABDG_00364 1.1e-96 K Bacterial regulatory proteins, tetR family
CLDPABDG_00365 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
CLDPABDG_00366 1.1e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CLDPABDG_00367 3.4e-135 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
CLDPABDG_00368 1.4e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
CLDPABDG_00369 1.8e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLDPABDG_00370 8e-73 S Domain of unknown function (DUF4143)
CLDPABDG_00371 0.0 3.2.1.22 G lipolytic protein G-D-S-L family
CLDPABDG_00372 1.9e-271 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
CLDPABDG_00373 2.7e-231 G Bacterial extracellular solute-binding protein
CLDPABDG_00374 5.7e-156 malC G Binding-protein-dependent transport system inner membrane component
CLDPABDG_00375 7.4e-142 G Binding-protein-dependent transport system inner membrane component
CLDPABDG_00376 9.2e-160 K Periplasmic binding protein domain
CLDPABDG_00378 5.9e-46 K Acetyltransferase (GNAT) family
CLDPABDG_00379 1.3e-23 S Protein of unknown function (DUF1778)
CLDPABDG_00380 6.7e-07 2.7.13.3 T Histidine kinase
CLDPABDG_00381 1.5e-44 K helix_turn_helix, Lux Regulon
CLDPABDG_00382 3.8e-40
CLDPABDG_00383 2.4e-115
CLDPABDG_00384 6.8e-303 S Calcineurin-like phosphoesterase
CLDPABDG_00385 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLDPABDG_00386 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
CLDPABDG_00387 2.1e-256 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
CLDPABDG_00388 0.0 3.2.1.97 GH101 G Glycosyl hydrolases family 43
CLDPABDG_00389 1.1e-195 K helix_turn _helix lactose operon repressor
CLDPABDG_00390 1.3e-203 abf G Glycosyl hydrolases family 43
CLDPABDG_00391 1.1e-292 G Bacterial extracellular solute-binding protein
CLDPABDG_00392 4.6e-169 G Binding-protein-dependent transport system inner membrane component
CLDPABDG_00393 1.7e-163 G Binding-protein-dependent transport system inner membrane component
CLDPABDG_00394 1.2e-183 G beta-fructofuranosidase activity
CLDPABDG_00395 8.5e-101 S Protein of unknown function, DUF624
CLDPABDG_00396 1.1e-25 S Beta-L-arabinofuranosidase, GH127
CLDPABDG_00397 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
CLDPABDG_00398 2.7e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
CLDPABDG_00399 5.9e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
CLDPABDG_00400 3.3e-190 3.6.1.27 I PAP2 superfamily
CLDPABDG_00401 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLDPABDG_00402 4.1e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CLDPABDG_00403 1.6e-192 holB 2.7.7.7 L DNA polymerase III
CLDPABDG_00404 7.1e-184 K helix_turn _helix lactose operon repressor
CLDPABDG_00405 6e-39 ptsH G PTS HPr component phosphorylation site
CLDPABDG_00406 4.6e-286 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CLDPABDG_00407 2.4e-106 S Phosphatidylethanolamine-binding protein
CLDPABDG_00408 0.0 pepD E Peptidase family C69
CLDPABDG_00409 9.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
CLDPABDG_00410 6.7e-62 S Macrophage migration inhibitory factor (MIF)
CLDPABDG_00411 7.1e-95 S GtrA-like protein
CLDPABDG_00412 3.1e-262 EGP Major facilitator Superfamily
CLDPABDG_00413 1.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
CLDPABDG_00414 2.9e-182
CLDPABDG_00415 1.7e-97 S Protein of unknown function (DUF805)
CLDPABDG_00416 5.5e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLDPABDG_00419 4.3e-267 S Calcineurin-like phosphoesterase
CLDPABDG_00420 3.6e-138 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
CLDPABDG_00421 2.7e-271 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLDPABDG_00422 8.4e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLDPABDG_00423 6.1e-200 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
CLDPABDG_00424 1e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CLDPABDG_00425 1.1e-172 plsC2 2.3.1.51 I Phosphate acyltransferases
CLDPABDG_00426 4.3e-178 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CLDPABDG_00427 1.9e-217 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
CLDPABDG_00428 9.6e-214 P Bacterial extracellular solute-binding protein
CLDPABDG_00429 8.5e-144 U Binding-protein-dependent transport system inner membrane component
CLDPABDG_00430 8.9e-140 U Binding-protein-dependent transport system inner membrane component
CLDPABDG_00431 1.6e-200 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CLDPABDG_00432 6.5e-175 S CAAX protease self-immunity
CLDPABDG_00433 1.2e-135 M Mechanosensitive ion channel
CLDPABDG_00434 8.5e-221 MA20_36090 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00435 2.5e-225 MA20_36090 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00436 2e-123 K Bacterial regulatory proteins, tetR family
CLDPABDG_00437 4.4e-230 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
CLDPABDG_00438 2.8e-83 gntK 2.7.1.12 F Shikimate kinase
CLDPABDG_00439 4.8e-126 gntR K FCD
CLDPABDG_00440 1.2e-228 yxiO S Vacuole effluxer Atg22 like
CLDPABDG_00441 0.0 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00442 8.4e-30 rpmB J Ribosomal L28 family
CLDPABDG_00443 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
CLDPABDG_00444 5.9e-106 rsmD 2.1.1.171 L Conserved hypothetical protein 95
CLDPABDG_00445 4.6e-150 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
CLDPABDG_00446 1e-107 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CLDPABDG_00447 1.8e-34 CP_0960 S Belongs to the UPF0109 family
CLDPABDG_00448 3.9e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
CLDPABDG_00449 4.4e-178 S Endonuclease/Exonuclease/phosphatase family
CLDPABDG_00450 8.7e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLDPABDG_00451 3.2e-295 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLDPABDG_00452 1.2e-149 guaA1 6.3.5.2 F Peptidase C26
CLDPABDG_00453 0.0 yjjK S ABC transporter
CLDPABDG_00454 1.4e-90 ilvN 2.2.1.6 E ACT domain
CLDPABDG_00455 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
CLDPABDG_00456 5.8e-136 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CLDPABDG_00457 1e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
CLDPABDG_00458 1.8e-113 yceD S Uncharacterized ACR, COG1399
CLDPABDG_00459 8.5e-134
CLDPABDG_00460 7.7e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CLDPABDG_00461 3.2e-58 S Protein of unknown function (DUF3039)
CLDPABDG_00462 4.6e-196 yghZ C Aldo/keto reductase family
CLDPABDG_00463 1.1e-77 soxR K MerR, DNA binding
CLDPABDG_00464 3.6e-120 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CLDPABDG_00465 1.9e-138 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CLDPABDG_00466 1.1e-250 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CLDPABDG_00467 4.4e-244 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
CLDPABDG_00468 5.3e-221 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
CLDPABDG_00471 5.4e-181 S Auxin Efflux Carrier
CLDPABDG_00472 0.0 pgi 5.3.1.9 G Belongs to the GPI family
CLDPABDG_00473 3e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CLDPABDG_00474 2.6e-123 lepB 3.4.21.89 U Belongs to the peptidase S26 family
CLDPABDG_00475 2.1e-137 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLDPABDG_00476 5e-128 V ATPases associated with a variety of cellular activities
CLDPABDG_00477 2.5e-270 V Efflux ABC transporter, permease protein
CLDPABDG_00478 7.9e-166 mdcF S Transporter, auxin efflux carrier (AEC) family protein
CLDPABDG_00479 1.5e-230 dapE 3.5.1.18 E Peptidase dimerisation domain
CLDPABDG_00480 1.2e-307 rne 3.1.26.12 J Ribonuclease E/G family
CLDPABDG_00481 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
CLDPABDG_00482 2.6e-39 rpmA J Ribosomal L27 protein
CLDPABDG_00483 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CLDPABDG_00484 1e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CLDPABDG_00485 3.3e-233 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
CLDPABDG_00487 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CLDPABDG_00488 2.9e-129 nusG K Participates in transcription elongation, termination and antitermination
CLDPABDG_00489 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CLDPABDG_00490 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CLDPABDG_00491 5.9e-143 QT PucR C-terminal helix-turn-helix domain
CLDPABDG_00492 0.0
CLDPABDG_00493 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
CLDPABDG_00494 2.1e-79 bioY S BioY family
CLDPABDG_00495 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
CLDPABDG_00496 0.0 pccB I Carboxyl transferase domain
CLDPABDG_00497 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
CLDPABDG_00499 1.2e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CLDPABDG_00500 0.0 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
CLDPABDG_00502 1.2e-118
CLDPABDG_00503 1.7e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CLDPABDG_00504 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
CLDPABDG_00505 1.7e-91 lemA S LemA family
CLDPABDG_00506 0.0 S Predicted membrane protein (DUF2207)
CLDPABDG_00507 3.7e-170 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
CLDPABDG_00508 7e-297 yegQ O Peptidase family U32 C-terminal domain
CLDPABDG_00509 1.2e-183 yfiH Q Multi-copper polyphenol oxidoreductase laccase
CLDPABDG_00510 2.5e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
CLDPABDG_00511 5.8e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CLDPABDG_00512 7.7e-59 D nuclear chromosome segregation
CLDPABDG_00513 3.9e-267 pepC 3.4.22.40 E Peptidase C1-like family
CLDPABDG_00514 3.3e-211 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLDPABDG_00515 4.2e-225 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLDPABDG_00516 2.8e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLDPABDG_00517 7.3e-216 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
CLDPABDG_00518 3.4e-129 KT Transcriptional regulatory protein, C terminal
CLDPABDG_00519 1.6e-197 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
CLDPABDG_00520 3.4e-164 pstC P probably responsible for the translocation of the substrate across the membrane
CLDPABDG_00521 1.5e-167 pstA P Phosphate transport system permease
CLDPABDG_00522 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLDPABDG_00523 2.8e-144 P Zinc-uptake complex component A periplasmic
CLDPABDG_00524 1.3e-246 pbuO S Permease family
CLDPABDG_00525 1.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CLDPABDG_00526 2.4e-36 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CLDPABDG_00527 2.1e-175 T Forkhead associated domain
CLDPABDG_00528 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
CLDPABDG_00529 7e-35
CLDPABDG_00530 1e-90 flgA NO SAF
CLDPABDG_00531 1.3e-29 fmdB S Putative regulatory protein
CLDPABDG_00532 2.4e-100 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
CLDPABDG_00533 2.9e-122 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
CLDPABDG_00534 4.7e-147
CLDPABDG_00535 2.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CLDPABDG_00539 5.5e-25 rpmG J Ribosomal protein L33
CLDPABDG_00540 2.2e-205 murB 1.3.1.98 M Cell wall formation
CLDPABDG_00541 7.4e-267 E aromatic amino acid transport protein AroP K03293
CLDPABDG_00542 8.3e-59 fdxA C 4Fe-4S binding domain
CLDPABDG_00543 2.7e-200 dapC E Aminotransferase class I and II
CLDPABDG_00544 2.9e-36 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
CLDPABDG_00545 0.0 G Psort location Cytoplasmic, score 8.87
CLDPABDG_00546 1.7e-231 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
CLDPABDG_00547 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
CLDPABDG_00548 3.6e-295 CE10 I Belongs to the type-B carboxylesterase lipase family
CLDPABDG_00550 7.4e-223 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CLDPABDG_00551 4.7e-252 M Bacterial capsule synthesis protein PGA_cap
CLDPABDG_00552 9.4e-186 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLDPABDG_00553 8.1e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
CLDPABDG_00554 3.1e-122
CLDPABDG_00555 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
CLDPABDG_00556 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CLDPABDG_00557 3.4e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
CLDPABDG_00558 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CLDPABDG_00559 1.4e-76 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CLDPABDG_00560 1e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
CLDPABDG_00561 3.2e-239 EGP Major facilitator Superfamily
CLDPABDG_00562 9.5e-197 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
CLDPABDG_00563 8.1e-182 rhaR_1 K helix_turn_helix, arabinose operon control protein
CLDPABDG_00564 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
CLDPABDG_00565 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
CLDPABDG_00566 2.3e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CLDPABDG_00567 5.3e-116 rplD J Forms part of the polypeptide exit tunnel
CLDPABDG_00568 6.8e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CLDPABDG_00569 8e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CLDPABDG_00570 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLDPABDG_00571 1.9e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CLDPABDG_00572 1e-97 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CLDPABDG_00573 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLDPABDG_00574 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
CLDPABDG_00575 4.9e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CLDPABDG_00576 3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CLDPABDG_00577 8.7e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CLDPABDG_00578 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CLDPABDG_00579 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLDPABDG_00580 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CLDPABDG_00581 3.8e-96 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CLDPABDG_00582 3.3e-59 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CLDPABDG_00583 1.2e-92 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CLDPABDG_00584 3.4e-25 rpmD J Ribosomal protein L30p/L7e
CLDPABDG_00585 9.8e-74 rplO J binds to the 23S rRNA
CLDPABDG_00586 3.8e-238 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CLDPABDG_00587 5.5e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CLDPABDG_00588 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CLDPABDG_00589 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
CLDPABDG_00590 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CLDPABDG_00591 1.9e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLDPABDG_00592 4.7e-185 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLDPABDG_00593 1.3e-66 rplQ J Ribosomal protein L17
CLDPABDG_00594 4.4e-183 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CLDPABDG_00596 6.4e-101
CLDPABDG_00597 6.1e-191 nusA K Participates in both transcription termination and antitermination
CLDPABDG_00598 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CLDPABDG_00599 2.2e-69 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CLDPABDG_00600 5.6e-187 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CLDPABDG_00601 8e-219 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
CLDPABDG_00602 4.1e-251 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CLDPABDG_00603 6.5e-108
CLDPABDG_00605 2.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CLDPABDG_00606 3e-213 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLDPABDG_00607 3e-251 T GHKL domain
CLDPABDG_00608 2.1e-151 T LytTr DNA-binding domain
CLDPABDG_00609 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CLDPABDG_00610 0.0 crr G pts system, glucose-specific IIABC component
CLDPABDG_00611 1.8e-156 arbG K CAT RNA binding domain
CLDPABDG_00612 9.8e-200 I Diacylglycerol kinase catalytic domain
CLDPABDG_00613 1.2e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CLDPABDG_00615 6.7e-187 yegU O ADP-ribosylglycohydrolase
CLDPABDG_00616 8.3e-190 yegV G pfkB family carbohydrate kinase
CLDPABDG_00617 1.1e-270 U Permease for cytosine/purines, uracil, thiamine, allantoin
CLDPABDG_00618 1.1e-101 Q Isochorismatase family
CLDPABDG_00619 8.8e-214 S Choline/ethanolamine kinase
CLDPABDG_00620 2.5e-275 eat E Amino acid permease
CLDPABDG_00621 4.1e-264 gabT 2.6.1.19, 2.6.1.22 H Aminotransferase class-III
CLDPABDG_00622 1.5e-141 yidP K UTRA
CLDPABDG_00623 1.9e-121 degU K helix_turn_helix, Lux Regulon
CLDPABDG_00624 1.5e-257 tcsS3 KT PspC domain
CLDPABDG_00625 8.9e-148 pspC KT PspC domain
CLDPABDG_00626 7.1e-93
CLDPABDG_00627 1.5e-115 S Protein of unknown function (DUF4125)
CLDPABDG_00628 0.0 S Domain of unknown function (DUF4037)
CLDPABDG_00629 4.6e-211 araJ EGP Major facilitator Superfamily
CLDPABDG_00631 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
CLDPABDG_00632 5.6e-203 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
CLDPABDG_00633 3e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CLDPABDG_00634 0.0 4.2.1.53 S MCRA family
CLDPABDG_00635 3.3e-89 phoU P Plays a role in the regulation of phosphate uptake
CLDPABDG_00636 9.6e-217 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CLDPABDG_00637 6.2e-41
CLDPABDG_00638 2.7e-216 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CLDPABDG_00639 1.3e-160 usp 3.5.1.28 CBM50 S CHAP domain
CLDPABDG_00640 4.6e-92 M NlpC/P60 family
CLDPABDG_00641 2.1e-188 T Universal stress protein family
CLDPABDG_00642 1.4e-71 attW O OsmC-like protein
CLDPABDG_00643 3.2e-180 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CLDPABDG_00644 1.6e-128 folA 1.5.1.3 H dihydrofolate reductase
CLDPABDG_00645 5.2e-84 ptpA 3.1.3.48 T low molecular weight
CLDPABDG_00647 9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
CLDPABDG_00648 1.5e-169 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CLDPABDG_00652 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
CLDPABDG_00653 3e-162
CLDPABDG_00654 1.7e-82 S Uncharacterised protein conserved in bacteria (DUF2194)
CLDPABDG_00655 3.9e-270 S Uncharacterised protein conserved in bacteria (DUF2194)
CLDPABDG_00656 5.2e-286 pelF GT4 M Domain of unknown function (DUF3492)
CLDPABDG_00657 2.1e-285 pelG S Putative exopolysaccharide Exporter (EPS-E)
CLDPABDG_00658 1.8e-310 cotH M CotH kinase protein
CLDPABDG_00659 2.2e-159 P VTC domain
CLDPABDG_00660 5e-111 S Domain of unknown function (DUF4956)
CLDPABDG_00661 0.0 yliE T Putative diguanylate phosphodiesterase
CLDPABDG_00662 1.8e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
CLDPABDG_00663 5.5e-180 3.4.14.13 M Glycosyltransferase like family 2
CLDPABDG_00664 1.4e-233 S AI-2E family transporter
CLDPABDG_00665 6.7e-234 epsG M Glycosyl transferase family 21
CLDPABDG_00666 8.4e-260 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
CLDPABDG_00667 1.3e-207 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CLDPABDG_00668 8.6e-99 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
CLDPABDG_00669 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLDPABDG_00670 9.6e-115 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
CLDPABDG_00671 2.6e-155 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CLDPABDG_00672 8.6e-271 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CLDPABDG_00673 6.2e-94 S Protein of unknown function (DUF3180)
CLDPABDG_00674 8.5e-165 tesB I Thioesterase-like superfamily
CLDPABDG_00675 0.0 yjjK S ATP-binding cassette protein, ChvD family
CLDPABDG_00676 1.5e-180 V Beta-lactamase
CLDPABDG_00677 2.5e-74 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
CLDPABDG_00678 1.5e-81 ribD 1.1.1.193, 3.5.4.26 H Cytidine and deoxycytidylate deaminase zinc-binding region
CLDPABDG_00679 2e-148 L PFAM Integrase catalytic
CLDPABDG_00680 0.0 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
CLDPABDG_00681 1.5e-269 L PFAM Integrase catalytic
CLDPABDG_00682 7e-136 L IstB-like ATP binding protein
CLDPABDG_00683 2.7e-188 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CLDPABDG_00685 7.7e-101 K DNA binding
CLDPABDG_00686 1.1e-101 dam2 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
CLDPABDG_00687 1.4e-08
CLDPABDG_00689 0.0 U Type IV secretory system Conjugative DNA transfer
CLDPABDG_00690 1.3e-35
CLDPABDG_00691 4.4e-33
CLDPABDG_00692 8.3e-235 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
CLDPABDG_00694 2.7e-290
CLDPABDG_00695 9.3e-147 S Protein of unknown function (DUF3801)
CLDPABDG_00696 1.1e-271 ltrBE1 U Relaxase/Mobilisation nuclease domain
CLDPABDG_00697 2e-51 S Bacterial mobilisation protein (MobC)
CLDPABDG_00698 2.5e-42 K Protein of unknown function (DUF2442)
CLDPABDG_00699 2.1e-44 S Domain of unknown function (DUF4160)
CLDPABDG_00701 5.3e-31
CLDPABDG_00702 1e-59
CLDPABDG_00703 0.0 topB 5.99.1.2 L DNA topoisomerase
CLDPABDG_00704 1.2e-64
CLDPABDG_00705 5e-64
CLDPABDG_00706 5.7e-66
CLDPABDG_00707 1.6e-182 S Fic/DOC family
CLDPABDG_00708 1.8e-98 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
CLDPABDG_00710 7.3e-26
CLDPABDG_00711 1.6e-145 fic D Fic/DOC family
CLDPABDG_00712 5.1e-259 L Phage integrase family
CLDPABDG_00713 2.1e-244 dinF V MatE
CLDPABDG_00714 0.0 S LPXTG-motif cell wall anchor domain protein
CLDPABDG_00716 3.5e-60 L Helix-turn-helix domain
CLDPABDG_00717 9.1e-133 insK L Integrase core domain
CLDPABDG_00718 1e-30 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00719 1.2e-126 V Abi-like protein
CLDPABDG_00720 1.1e-74
CLDPABDG_00721 7.6e-110 metI P Binding-protein-dependent transport system inner membrane component
CLDPABDG_00722 4.2e-147 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLDPABDG_00723 1.6e-146 metQ P NLPA lipoprotein
CLDPABDG_00724 4.8e-156 S Sucrose-6F-phosphate phosphohydrolase
CLDPABDG_00725 1.8e-225 S Peptidase dimerisation domain
CLDPABDG_00726 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLDPABDG_00727 2.2e-30
CLDPABDG_00728 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
CLDPABDG_00729 7.4e-166 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLDPABDG_00730 9e-81 S Protein of unknown function (DUF3000)
CLDPABDG_00731 3.3e-239 rnd 3.1.13.5 J 3'-5' exonuclease
CLDPABDG_00732 1.2e-231 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CLDPABDG_00733 2e-135 yebE S DUF218 domain
CLDPABDG_00734 7.4e-132 E Psort location Cytoplasmic, score 8.87
CLDPABDG_00735 3e-159 O Thioredoxin
CLDPABDG_00736 1.2e-158 msbA2 3.6.3.44 V ABC transporter transmembrane region
CLDPABDG_00737 4.2e-138 3.6.3.44 V ABC transporter
CLDPABDG_00738 9.6e-128 KLT serine threonine protein kinase
CLDPABDG_00739 5.7e-112 L Phage integrase family
CLDPABDG_00740 0.0 KLT Lanthionine synthetase C-like protein
CLDPABDG_00741 6.5e-122 K helix_turn_helix, Lux Regulon
CLDPABDG_00742 9e-159 2.7.13.3 T Histidine kinase
CLDPABDG_00744 3.5e-25 C Aldo/keto reductase family
CLDPABDG_00745 1.5e-117 S phosphoesterase or phosphohydrolase
CLDPABDG_00746 8.5e-125
CLDPABDG_00747 1.3e-67
CLDPABDG_00748 5.8e-09 XK26_04895
CLDPABDG_00749 4e-121 L DNA helicase
CLDPABDG_00750 0.0 S AAA domain, putative AbiEii toxin, Type IV TA system
CLDPABDG_00751 8.4e-23
CLDPABDG_00752 2.4e-74 S Putative inner membrane protein (DUF1819)
CLDPABDG_00753 1.3e-43 lexA 3.6.4.12 K Putative DNA-binding domain
CLDPABDG_00754 1.5e-55 mazG S MazG-like family
CLDPABDG_00755 6.9e-167 3.1.21.3 L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CLDPABDG_00756 8.8e-161 L Uncharacterized conserved protein (DUF2075)
CLDPABDG_00757 2.5e-29
CLDPABDG_00758 3.6e-125 3.2.1.8 S alpha beta
CLDPABDG_00759 1.4e-86 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CLDPABDG_00760 2e-191 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CLDPABDG_00761 1.3e-113 kcsA U Ion channel
CLDPABDG_00762 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
CLDPABDG_00763 6.1e-109 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CLDPABDG_00764 0.0 ecfA GP ABC transporter, ATP-binding protein
CLDPABDG_00765 2.4e-47 yhbY J CRS1_YhbY
CLDPABDG_00766 4.8e-145 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CLDPABDG_00767 6.3e-201 S Glycosyltransferase, group 2 family protein
CLDPABDG_00768 1.6e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
CLDPABDG_00769 1.8e-220 E Aminotransferase class I and II
CLDPABDG_00770 5e-145 bioM P ATPases associated with a variety of cellular activities
CLDPABDG_00771 0.0 2.8.2.22 S Arylsulfotransferase Ig-like domain
CLDPABDG_00772 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CLDPABDG_00773 0.0 S Tetratricopeptide repeat
CLDPABDG_00774 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CLDPABDG_00775 4.2e-206 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
CLDPABDG_00776 2.9e-108 ykoE S ABC-type cobalt transport system, permease component
CLDPABDG_00777 1e-284 ykoD P ATPases associated with a variety of cellular activities
CLDPABDG_00778 3.2e-150 cbiQ P Cobalt transport protein
CLDPABDG_00779 1.9e-261 argE E Peptidase dimerisation domain
CLDPABDG_00780 1e-105 S Protein of unknown function (DUF3043)
CLDPABDG_00781 1.4e-278 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLDPABDG_00782 2.7e-143 S Domain of unknown function (DUF4191)
CLDPABDG_00783 1e-281 glnA 6.3.1.2 E glutamine synthetase
CLDPABDG_00784 4e-42 V DNA modification
CLDPABDG_00785 2.2e-113 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
CLDPABDG_00786 1.5e-17 L HNH endonuclease
CLDPABDG_00788 2.9e-17
CLDPABDG_00789 2.7e-94 yvdD 3.2.2.10 S Possible lysine decarboxylase
CLDPABDG_00790 3.3e-158 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLDPABDG_00791 2.4e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CLDPABDG_00792 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
CLDPABDG_00793 4.9e-99
CLDPABDG_00794 4.1e-206 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CLDPABDG_00795 5e-218 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CLDPABDG_00796 2.8e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
CLDPABDG_00797 1e-240 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
CLDPABDG_00798 7.1e-186 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CLDPABDG_00799 1.9e-84 argR K Regulates arginine biosynthesis genes
CLDPABDG_00800 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
CLDPABDG_00801 2.9e-279 argH 4.3.2.1 E argininosuccinate lyase
CLDPABDG_00802 9.7e-94 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
CLDPABDG_00803 8.6e-137 S Putative ABC-transporter type IV
CLDPABDG_00804 0.0 S Protein of unknown function (DUF975)
CLDPABDG_00805 1.3e-251 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CLDPABDG_00806 1.5e-149 L Tetratricopeptide repeat
CLDPABDG_00807 3.7e-193 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
CLDPABDG_00808 2.9e-134 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
CLDPABDG_00809 3e-116 trkA P TrkA-N domain
CLDPABDG_00810 2.1e-266 trkB P Cation transport protein
CLDPABDG_00811 1.3e-187 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CLDPABDG_00812 3.7e-262 recN L May be involved in recombinational repair of damaged DNA
CLDPABDG_00813 4.4e-123 S Haloacid dehalogenase-like hydrolase
CLDPABDG_00814 7.4e-124 S ABC-2 family transporter protein
CLDPABDG_00815 9.2e-175 V ATPases associated with a variety of cellular activities
CLDPABDG_00816 1.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
CLDPABDG_00817 4.3e-23 C Acetamidase/Formamidase family
CLDPABDG_00818 3.2e-45 L transposition
CLDPABDG_00819 0.0 S Histidine phosphatase superfamily (branch 2)
CLDPABDG_00820 7.4e-95 S Pyridoxamine 5'-phosphate oxidase
CLDPABDG_00821 1.9e-25 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00822 1.1e-95 bcp 1.11.1.15 O Redoxin
CLDPABDG_00823 7.4e-77 3.4.13.22 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLDPABDG_00824 1.4e-167 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLDPABDG_00825 6.9e-164 IQ Enoyl-(Acyl carrier protein) reductase
CLDPABDG_00826 2.9e-141
CLDPABDG_00827 4.3e-174 G Fic/DOC family
CLDPABDG_00828 1e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
CLDPABDG_00829 4.6e-233 EGP Major facilitator Superfamily
CLDPABDG_00830 2.1e-285 thrC 4.2.3.1 E Threonine synthase N terminus
CLDPABDG_00831 6.5e-251 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CLDPABDG_00832 2.9e-243 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CLDPABDG_00833 3.2e-101
CLDPABDG_00834 1.8e-141 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CLDPABDG_00835 5e-190 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLDPABDG_00837 1.8e-121
CLDPABDG_00838 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
CLDPABDG_00839 1.1e-83 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CLDPABDG_00840 1.9e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
CLDPABDG_00841 5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CLDPABDG_00843 2.6e-135 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
CLDPABDG_00844 5.8e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CLDPABDG_00845 6.1e-177 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
CLDPABDG_00846 3.6e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
CLDPABDG_00847 3e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
CLDPABDG_00848 2.9e-72 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CLDPABDG_00849 7.1e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CLDPABDG_00850 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
CLDPABDG_00851 2.6e-163 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
CLDPABDG_00852 4.6e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CLDPABDG_00853 4.2e-97 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
CLDPABDG_00854 1.9e-40 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
CLDPABDG_00855 3.9e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
CLDPABDG_00856 1.4e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLDPABDG_00857 6e-169 S Bacterial protein of unknown function (DUF881)
CLDPABDG_00858 4.2e-45 sbp S Protein of unknown function (DUF1290)
CLDPABDG_00859 1.2e-138 S Bacterial protein of unknown function (DUF881)
CLDPABDG_00860 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CLDPABDG_00861 1.3e-101 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
CLDPABDG_00862 5.2e-128 yebC K transcriptional regulatory protein
CLDPABDG_00863 1e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CLDPABDG_00864 1e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CLDPABDG_00865 4.7e-199 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CLDPABDG_00866 3.7e-48 yajC U Preprotein translocase subunit
CLDPABDG_00867 1.8e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CLDPABDG_00868 4.9e-221 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
CLDPABDG_00869 2.6e-161 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CLDPABDG_00870 3e-246
CLDPABDG_00871 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
CLDPABDG_00872 8.2e-34
CLDPABDG_00873 2.2e-160 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
CLDPABDG_00874 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CLDPABDG_00875 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
CLDPABDG_00876 1.1e-69
CLDPABDG_00878 1.4e-264 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
CLDPABDG_00879 0.0 pafB K WYL domain
CLDPABDG_00880 2.1e-54
CLDPABDG_00881 0.0 helY L DEAD DEAH box helicase
CLDPABDG_00882 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
CLDPABDG_00883 3e-141 pgp 3.1.3.18 S HAD-hyrolase-like
CLDPABDG_00884 4.6e-61
CLDPABDG_00885 9.7e-112 K helix_turn_helix, mercury resistance
CLDPABDG_00886 4.7e-76 garA T Inner membrane component of T3SS, cytoplasmic domain
CLDPABDG_00887 3.9e-26
CLDPABDG_00888 5.7e-14
CLDPABDG_00893 2.8e-156 S PAC2 family
CLDPABDG_00894 6.9e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
CLDPABDG_00895 5.1e-158 G Fructosamine kinase
CLDPABDG_00896 6.8e-188 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CLDPABDG_00897 1.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CLDPABDG_00898 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
CLDPABDG_00899 4.2e-203 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLDPABDG_00900 2.6e-42 nadR H ATPase kinase involved in NAD metabolism
CLDPABDG_00901 5.6e-112 pnuC H Nicotinamide mononucleotide transporter
CLDPABDG_00902 7.1e-09 pnuC H Nicotinamide mononucleotide transporter
CLDPABDG_00903 8e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
CLDPABDG_00904 3.3e-163 S Sucrose-6F-phosphate phosphohydrolase
CLDPABDG_00905 2.4e-32 secG U Preprotein translocase SecG subunit
CLDPABDG_00906 9.6e-149 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CLDPABDG_00907 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
CLDPABDG_00908 3.7e-171 whiA K May be required for sporulation
CLDPABDG_00909 4e-170 rapZ S Displays ATPase and GTPase activities
CLDPABDG_00910 7.1e-183 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
CLDPABDG_00911 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CLDPABDG_00912 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CLDPABDG_00913 1e-218 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00914 0.0 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00915 6e-111 S Domain of unknown function (DUF4194)
CLDPABDG_00916 3.4e-265 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00917 2e-13
CLDPABDG_00919 2.8e-66 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLDPABDG_00920 6.1e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
CLDPABDG_00921 1.2e-299 ybiT S ABC transporter
CLDPABDG_00923 5.3e-157 S IMP dehydrogenase activity
CLDPABDG_00924 4.2e-272 pepC 3.4.22.40 E Peptidase C1-like family
CLDPABDG_00925 5.7e-146 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
CLDPABDG_00926 2.9e-130
CLDPABDG_00927 1e-98
CLDPABDG_00930 3.5e-183 cat P Cation efflux family
CLDPABDG_00931 3.6e-76 S Psort location CytoplasmicMembrane, score
CLDPABDG_00932 9.3e-222 yxjG_1 E Psort location Cytoplasmic, score 8.87
CLDPABDG_00933 2.4e-144 4.1.1.44 S Carboxymuconolactone decarboxylase family
CLDPABDG_00934 3e-198 adhB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
CLDPABDG_00935 6.7e-72 K MerR family regulatory protein
CLDPABDG_00936 5.3e-119 ykoE S ABC-type cobalt transport system, permease component
CLDPABDG_00937 4.5e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CLDPABDG_00938 5.7e-119 yoaP E YoaP-like
CLDPABDG_00940 2.6e-194 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CLDPABDG_00941 1.1e-84 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
CLDPABDG_00942 1.3e-148 yeaZ 2.3.1.234 O Glycoprotease family
CLDPABDG_00943 9.2e-94 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
CLDPABDG_00944 7.1e-178 holA 2.7.7.7 L DNA polymerase III delta subunit
CLDPABDG_00945 0.0 comE S Competence protein
CLDPABDG_00946 9.8e-85 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
CLDPABDG_00947 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLDPABDG_00948 5.6e-142 ET Bacterial periplasmic substrate-binding proteins
CLDPABDG_00949 5.7e-172 corA P CorA-like Mg2+ transporter protein
CLDPABDG_00950 1.5e-163 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
CLDPABDG_00951 1.5e-64 3.4.22.70 M Sortase family
CLDPABDG_00952 5.6e-83 3.4.22.70 M Sortase family
CLDPABDG_00953 4.3e-300 M domain protein
CLDPABDG_00954 2.7e-70 pdxH S Pfam:Pyridox_oxidase
CLDPABDG_00955 3.3e-228 XK27_00240 K Fic/DOC family
CLDPABDG_00957 1.3e-117
CLDPABDG_00958 2.5e-143 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
CLDPABDG_00959 3.6e-67 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CLDPABDG_00960 2.9e-241 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CLDPABDG_00961 9e-72 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CLDPABDG_00962 3e-107 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
CLDPABDG_00963 8.1e-210 guaB 1.1.1.205 F IMP dehydrogenase family protein
CLDPABDG_00964 5.3e-231 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
CLDPABDG_00965 4e-268 G ABC transporter substrate-binding protein
CLDPABDG_00966 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
CLDPABDG_00967 3.3e-96 M Peptidase family M23
CLDPABDG_00968 6.3e-62
CLDPABDG_00971 5e-125 XK27_06785 V ABC transporter
CLDPABDG_00972 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLDPABDG_00973 2.3e-108 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CLDPABDG_00974 6.7e-139 S SdpI/YhfL protein family
CLDPABDG_00975 4.3e-49 sdpR K helix_turn_helix, Arsenical Resistance Operon Repressor
CLDPABDG_00976 2.3e-121 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
CLDPABDG_00977 1.2e-218 yxjG_1 E Psort location Cytoplasmic, score 8.87
CLDPABDG_00978 6.1e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CLDPABDG_00979 8.8e-109 J Acetyltransferase (GNAT) domain
CLDPABDG_00980 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
CLDPABDG_00981 2.9e-162 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
CLDPABDG_00982 5.5e-124 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLDPABDG_00983 6.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CLDPABDG_00984 9.3e-155 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
CLDPABDG_00985 7e-178 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
CLDPABDG_00986 1.5e-277 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CLDPABDG_00987 4.2e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
CLDPABDG_00988 3e-187 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
CLDPABDG_00989 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
CLDPABDG_00990 1.6e-157 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
CLDPABDG_00991 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CLDPABDG_00992 4.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
CLDPABDG_00993 1.8e-198 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CLDPABDG_00994 7.1e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
CLDPABDG_00995 2.2e-248 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
CLDPABDG_00996 2e-74
CLDPABDG_00997 2.6e-307 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CLDPABDG_00998 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
CLDPABDG_00999 2.5e-234 F Psort location CytoplasmicMembrane, score 10.00
CLDPABDG_01000 2.1e-218 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
CLDPABDG_01001 1.5e-288 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
CLDPABDG_01002 5e-145 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
CLDPABDG_01003 3e-234 hemN H Involved in the biosynthesis of porphyrin-containing compound
CLDPABDG_01004 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CLDPABDG_01005 2.9e-33 rpsT J Binds directly to 16S ribosomal RNA
CLDPABDG_01006 1.1e-133 S UPF0126 domain
CLDPABDG_01007 1.9e-227 ilvE 2.6.1.42 E Amino-transferase class IV
CLDPABDG_01009 2.6e-73 K Acetyltransferase (GNAT) domain
CLDPABDG_01010 3.2e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLDPABDG_01011 1.7e-93 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLDPABDG_01012 1e-89 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CLDPABDG_01013 3.8e-195 S alpha beta
CLDPABDG_01014 1.1e-24 yhjX EGP Major facilitator Superfamily
CLDPABDG_01015 1.3e-29 EGP Major facilitator Superfamily
CLDPABDG_01016 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CLDPABDG_01017 2.4e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLDPABDG_01019 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLDPABDG_01020 3.3e-74 nrdI F Probably involved in ribonucleotide reductase function
CLDPABDG_01021 1.1e-39 nrdH O Glutaredoxin
CLDPABDG_01023 4.9e-122 K Bacterial regulatory proteins, tetR family
CLDPABDG_01024 2.1e-225 G Transmembrane secretion effector
CLDPABDG_01026 1.9e-269 S Psort location Cytoplasmic, score 8.87
CLDPABDG_01027 3.5e-258 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CLDPABDG_01028 1.6e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
CLDPABDG_01029 1.7e-202 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
CLDPABDG_01030 0.0 fadD 6.2.1.3 I AMP-binding enzyme
CLDPABDG_01031 2.6e-183 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CLDPABDG_01032 1.4e-243 corC S CBS domain
CLDPABDG_01033 1.8e-101 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CLDPABDG_01034 6.5e-207 phoH T PhoH-like protein
CLDPABDG_01035 9.6e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
CLDPABDG_01036 4.5e-146 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
CLDPABDG_01038 2.2e-162 spoU 2.1.1.185 J SpoU rRNA Methylase family
CLDPABDG_01039 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CLDPABDG_01040 2.7e-108 yitW S Iron-sulfur cluster assembly protein
CLDPABDG_01041 2.6e-97 iscU C SUF system FeS assembly protein, NifU family
CLDPABDG_01042 5.5e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CLDPABDG_01043 1e-142 sufC O FeS assembly ATPase SufC
CLDPABDG_01044 3e-234 sufD O FeS assembly protein SufD
CLDPABDG_01045 2.1e-290 sufB O FeS assembly protein SufB
CLDPABDG_01046 0.0 S L,D-transpeptidase catalytic domain
CLDPABDG_01047 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CLDPABDG_01048 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
CLDPABDG_01049 4.9e-81 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
CLDPABDG_01050 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CLDPABDG_01051 1.3e-221 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CLDPABDG_01052 9.3e-57 3.4.23.43 S Type IV leader peptidase family
CLDPABDG_01053 8.9e-191 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CLDPABDG_01054 2.7e-82 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CLDPABDG_01055 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CLDPABDG_01056 2.5e-36
CLDPABDG_01057 3.4e-59 WQ51_05790 S Bacterial protein of unknown function (DUF948)
CLDPABDG_01058 5.6e-129 pgm3 G Phosphoglycerate mutase family
CLDPABDG_01059 9.4e-39 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
CLDPABDG_01060 3.1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CLDPABDG_01061 1.9e-150 lolD V ABC transporter
CLDPABDG_01062 4.8e-216 V FtsX-like permease family
CLDPABDG_01063 1.7e-61 S Domain of unknown function (DUF4418)
CLDPABDG_01064 0.0 pcrA 3.6.4.12 L DNA helicase
CLDPABDG_01065 7.4e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CLDPABDG_01066 4.7e-244 pbuX F Permease family
CLDPABDG_01067 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
CLDPABDG_01068 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLDPABDG_01069 1.9e-303 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
CLDPABDG_01070 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
CLDPABDG_01071 1.5e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
CLDPABDG_01072 4.5e-76 yiaC K Acetyltransferase (GNAT) domain
CLDPABDG_01073 2.2e-70 yvbK 3.1.3.25 K Acetyltransferase (GNAT) domain
CLDPABDG_01074 1.1e-256 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
CLDPABDG_01075 5.3e-29 S Putative phage holin Dp-1
CLDPABDG_01076 8.3e-195 M Glycosyl hydrolases family 25
CLDPABDG_01077 1.2e-17
CLDPABDG_01078 1.5e-150 L DNA integration
CLDPABDG_01080 1.5e-18
CLDPABDG_01082 4.9e-68
CLDPABDG_01084 3.3e-07 S Psort location Cytoplasmic, score
CLDPABDG_01086 1.3e-176 L Phage integrase family
CLDPABDG_01087 1.2e-144 S Sulfite exporter TauE/SafE
CLDPABDG_01088 6.2e-92 S ECF transporter, substrate-specific component
CLDPABDG_01089 1.4e-112 2.7.1.48 F uridine kinase
CLDPABDG_01090 2.6e-174 korD 1.2.7.3 C Domain of unknown function (DUF362)
CLDPABDG_01091 1.1e-226 C Na H antiporter family protein
CLDPABDG_01092 2.4e-179 MA20_14895 S Conserved hypothetical protein 698
CLDPABDG_01094 2e-120
CLDPABDG_01096 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
CLDPABDG_01097 5.9e-12
CLDPABDG_01098 6.8e-26 yccF S Inner membrane component domain
CLDPABDG_01099 4.7e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CLDPABDG_01100 1.4e-142 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CLDPABDG_01101 9.9e-271 pip 3.4.11.5 S alpha/beta hydrolase fold
CLDPABDG_01102 0.0 tcsS2 T Histidine kinase
CLDPABDG_01103 1.9e-130 K helix_turn_helix, Lux Regulon
CLDPABDG_01104 0.0 MV MacB-like periplasmic core domain
CLDPABDG_01105 1.4e-139 V ABC transporter, ATP-binding protein
CLDPABDG_01106 2.6e-191 K helix_turn_helix ASNC type
CLDPABDG_01107 1.2e-149 P Cobalt transport protein
CLDPABDG_01108 3.9e-306 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
CLDPABDG_01109 3.3e-95 XK27_01265 S ECF-type riboflavin transporter, S component
CLDPABDG_01110 1.9e-250 metY 2.5.1.49 E Aminotransferase class-V
CLDPABDG_01111 3.3e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
CLDPABDG_01112 3.1e-83 yraN L Belongs to the UPF0102 family
CLDPABDG_01113 1e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
CLDPABDG_01114 2.7e-255 dprA 5.99.1.2 LU DNA recombination-mediator protein A
CLDPABDG_01115 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
CLDPABDG_01116 5.2e-178 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
CLDPABDG_01117 1.8e-116 safC S O-methyltransferase
CLDPABDG_01118 3.9e-246 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CLDPABDG_01121 6.1e-241 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CLDPABDG_01122 8.6e-125 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CLDPABDG_01123 1e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CLDPABDG_01124 0.0 E ABC transporter, substrate-binding protein, family 5
CLDPABDG_01125 2.6e-251 EGP Major facilitator Superfamily
CLDPABDG_01126 1.2e-172 yjfF U Branched-chain amino acid transport system / permease component
CLDPABDG_01127 1.5e-181 ytfT U Branched-chain amino acid transport system / permease component
CLDPABDG_01128 6e-288 ytfR 3.6.3.17 G ATPases associated with a variety of cellular activities
CLDPABDG_01129 2.4e-165 G Periplasmic binding protein domain
CLDPABDG_01130 0.0 lpqB S Lipoprotein LpqB beta-propeller domain
CLDPABDG_01131 6.8e-287 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CLDPABDG_01132 4.5e-134 KT Transcriptional regulatory protein, C terminal
CLDPABDG_01133 4.1e-248 rarA L Recombination factor protein RarA
CLDPABDG_01134 0.0 L DEAD DEAH box helicase
CLDPABDG_01135 2.4e-189 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
CLDPABDG_01136 3.3e-198 gluD E Binding-protein-dependent transport system inner membrane component
CLDPABDG_01137 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
CLDPABDG_01138 1.4e-153 gluB ET Belongs to the bacterial solute-binding protein 3 family
CLDPABDG_01139 4.4e-144 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
CLDPABDG_01140 3.3e-138 glnQ 3.6.3.21 E ATPases associated with a variety of cellular activities
CLDPABDG_01141 7.1e-281 glnP E Binding-protein-dependent transport system inner membrane component
CLDPABDG_01142 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CLDPABDG_01143 5.3e-251 hisS 6.1.1.21 J Histidyl-tRNA synthetase
CLDPABDG_01144 1.5e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
CLDPABDG_01145 1.6e-140 3.5.2.10 S Creatinine amidohydrolase
CLDPABDG_01146 5e-246 proP EGP Sugar (and other) transporter
CLDPABDG_01147 4.7e-285 purR QT Purine catabolism regulatory protein-like family
CLDPABDG_01148 3.7e-254 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
CLDPABDG_01149 0.0 clpC O ATPase family associated with various cellular activities (AAA)
CLDPABDG_01150 1e-187 uspA T Belongs to the universal stress protein A family
CLDPABDG_01151 9.8e-182 S Protein of unknown function (DUF3027)
CLDPABDG_01152 4.5e-67 cspB K 'Cold-shock' DNA-binding domain
CLDPABDG_01153 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CLDPABDG_01154 2.6e-132 KT Response regulator receiver domain protein
CLDPABDG_01155 1.3e-124
CLDPABDG_01157 8.7e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CLDPABDG_01158 8.5e-77 S LytR cell envelope-related transcriptional attenuator
CLDPABDG_01159 4.4e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CLDPABDG_01160 4e-182 moxR S ATPase family associated with various cellular activities (AAA)
CLDPABDG_01161 3.6e-174 S Protein of unknown function DUF58
CLDPABDG_01162 3.6e-91
CLDPABDG_01163 1.8e-190 S von Willebrand factor (vWF) type A domain
CLDPABDG_01164 7.2e-181 S von Willebrand factor (vWF) type A domain
CLDPABDG_01165 1.1e-61
CLDPABDG_01166 5.6e-53
CLDPABDG_01167 1.7e-276 S PGAP1-like protein
CLDPABDG_01168 1.6e-279 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
CLDPABDG_01169 0.0 S Lysylphosphatidylglycerol synthase TM region
CLDPABDG_01170 1.4e-41 hup L Belongs to the bacterial histone-like protein family
CLDPABDG_01171 1.8e-57
CLDPABDG_01172 9.7e-141 C FMN binding
CLDPABDG_01173 6.7e-281 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CLDPABDG_01174 1.4e-24 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
CLDPABDG_01175 3.3e-160 hisN 3.1.3.25 G Inositol monophosphatase family
CLDPABDG_01176 5.1e-301 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
CLDPABDG_01177 6.4e-282 arc O AAA ATPase forming ring-shaped complexes
CLDPABDG_01178 3.5e-123 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
CLDPABDG_01179 1.1e-178 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CLDPABDG_01180 2.7e-134 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CLDPABDG_01181 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLDPABDG_01182 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CLDPABDG_01183 1.4e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CLDPABDG_01184 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
CLDPABDG_01186 7.5e-106 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CLDPABDG_01187 3.7e-171 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CLDPABDG_01188 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CLDPABDG_01189 1.1e-239 carA 6.3.5.5 F Belongs to the CarA family
CLDPABDG_01190 1.8e-75 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CLDPABDG_01191 2e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLDPABDG_01192 9.5e-233 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CLDPABDG_01193 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLDPABDG_01194 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CLDPABDG_01195 1.2e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CLDPABDG_01196 1.8e-187 yocS S SBF-like CPA transporter family (DUF4137)
CLDPABDG_01198 2.9e-198 ltaE 4.1.2.48 E Beta-eliminating lyase
CLDPABDG_01199 6.5e-226 M Glycosyl transferase 4-like domain
CLDPABDG_01200 1.1e-226 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CLDPABDG_01201 4.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
CLDPABDG_01202 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
CLDPABDG_01203 1.9e-36
CLDPABDG_01204 8.5e-309 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
CLDPABDG_01205 1e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CLDPABDG_01206 8.3e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
CLDPABDG_01207 2.8e-235 purD 6.3.4.13 F Belongs to the GARS family
CLDPABDG_01208 3e-246 EGP Major facilitator Superfamily
CLDPABDG_01209 1.1e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CLDPABDG_01210 1.1e-214 1.1.1.1 C Iron-containing alcohol dehydrogenase
CLDPABDG_01211 3.3e-129 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
CLDPABDG_01212 9.1e-189 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
CLDPABDG_01213 2.5e-203 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
CLDPABDG_01214 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
CLDPABDG_01215 2.3e-89 zur P Belongs to the Fur family
CLDPABDG_01216 1.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CLDPABDG_01217 4e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CLDPABDG_01218 1.2e-183 adh3 C Zinc-binding dehydrogenase
CLDPABDG_01219 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CLDPABDG_01220 9.8e-256 macB_8 V MacB-like periplasmic core domain
CLDPABDG_01221 1.7e-146 M Conserved repeat domain
CLDPABDG_01222 3.4e-129 V ATPases associated with a variety of cellular activities
CLDPABDG_01223 4.3e-75
CLDPABDG_01224 1.7e-13 S Domain of unknown function (DUF4143)
CLDPABDG_01225 3.1e-127 XK27_08050 O prohibitin homologues
CLDPABDG_01226 1.4e-43 XAC3035 O Glutaredoxin
CLDPABDG_01227 7e-21 P Belongs to the ABC transporter superfamily
CLDPABDG_01228 1.9e-98 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
CLDPABDG_01229 5e-218 mtnE 2.6.1.83 E Aminotransferase class I and II
CLDPABDG_01230 1.6e-96 metI P Psort location CytoplasmicMembrane, score 9.99
CLDPABDG_01231 3.2e-192 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLDPABDG_01232 3.7e-141 metQ M NLPA lipoprotein
CLDPABDG_01233 7.8e-196 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CLDPABDG_01234 5.4e-245 G Transporter major facilitator family protein
CLDPABDG_01235 0.0 ydcK 3.2.1.23, 5.4.2.9 JM Carbohydrate binding module (family 6)
CLDPABDG_01236 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
CLDPABDG_01237 1.2e-157 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_01238 1.1e-135 U Binding-protein-dependent transport system inner membrane component
CLDPABDG_01239 2.6e-233 G Bacterial extracellular solute-binding protein
CLDPABDG_01240 3.7e-190 K Periplasmic binding protein domain
CLDPABDG_01241 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
CLDPABDG_01242 5.3e-143 cjaA ET Bacterial periplasmic substrate-binding proteins
CLDPABDG_01243 4.6e-149 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
CLDPABDG_01244 1.8e-119 E Binding-protein-dependent transport system inner membrane component
CLDPABDG_01245 1.9e-110 papP E Binding-protein-dependent transport system inner membrane component
CLDPABDG_01246 2.1e-98 yhcX S Acetyltransferase (GNAT) family
CLDPABDG_01250 0.0 tetP J Elongation factor G, domain IV
CLDPABDG_01252 2.6e-214 ybiR P Citrate transporter
CLDPABDG_01253 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CLDPABDG_01254 5.9e-307 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLDPABDG_01255 3.1e-270 yhdG E aromatic amino acid transport protein AroP K03293
CLDPABDG_01256 1.4e-103 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLDPABDG_01257 3.9e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CLDPABDG_01258 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
CLDPABDG_01259 0.0 macB_2 V ATPases associated with a variety of cellular activities
CLDPABDG_01260 1e-218 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CLDPABDG_01261 8.4e-190 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
CLDPABDG_01262 4e-139 sapF E ATPases associated with a variety of cellular activities
CLDPABDG_01263 1.4e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
CLDPABDG_01264 1.2e-139 EP Binding-protein-dependent transport system inner membrane component
CLDPABDG_01265 4.8e-166 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_01266 3.5e-294 E ABC transporter, substrate-binding protein, family 5
CLDPABDG_01267 2.3e-240 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CLDPABDG_01268 5.9e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CLDPABDG_01269 1.1e-275 G Bacterial extracellular solute-binding protein
CLDPABDG_01270 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CLDPABDG_01271 5.3e-229 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
CLDPABDG_01272 1.2e-145 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
CLDPABDG_01273 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CLDPABDG_01274 8.5e-145 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
CLDPABDG_01275 2.2e-126 yecS E Binding-protein-dependent transport system inner membrane component
CLDPABDG_01276 3.2e-151 pknD ET ABC transporter, substrate-binding protein, family 3
CLDPABDG_01277 8.9e-32 pknD ET ABC transporter, substrate-binding protein, family 3
CLDPABDG_01278 5.2e-157 pknD ET ABC transporter, substrate-binding protein, family 3
CLDPABDG_01279 2e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CLDPABDG_01280 8.5e-148 usp 3.5.1.28 CBM50 D CHAP domain protein
CLDPABDG_01281 3.4e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
CLDPABDG_01282 2.3e-168 ftsE D Cell division ATP-binding protein FtsE
CLDPABDG_01283 1.1e-190 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CLDPABDG_01284 1.2e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CLDPABDG_01285 2.2e-142 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
CLDPABDG_01286 5.4e-250 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
CLDPABDG_01287 1.6e-151 map 3.4.11.18 E Methionine aminopeptidase
CLDPABDG_01288 0.0 pepO 3.4.24.71 O Peptidase family M13
CLDPABDG_01289 5.1e-93 L Single-strand binding protein family
CLDPABDG_01290 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CLDPABDG_01291 2.5e-269 recD2 3.6.4.12 L PIF1-like helicase
CLDPABDG_01292 4.6e-160 supH S Sucrose-6F-phosphate phosphohydrolase
CLDPABDG_01293 2.2e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
CLDPABDG_01294 2.7e-288 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
CLDPABDG_01295 4.5e-195 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
CLDPABDG_01296 9.9e-115 ywlC 2.7.7.87 J Belongs to the SUA5 family
CLDPABDG_01297 1.9e-124 livF E ATPases associated with a variety of cellular activities
CLDPABDG_01298 2.4e-150 E Branched-chain amino acid ATP-binding cassette transporter
CLDPABDG_01299 6.7e-196 livM U Belongs to the binding-protein-dependent transport system permease family
CLDPABDG_01300 9.5e-156 U Belongs to the binding-protein-dependent transport system permease family
CLDPABDG_01301 7.8e-219 livK E Receptor family ligand binding region
CLDPABDG_01302 3.2e-172 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CLDPABDG_01303 1.5e-189 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CLDPABDG_01304 1.5e-35 rpmE J Binds the 23S rRNA
CLDPABDG_01306 6.8e-226 xylR GK ROK family
CLDPABDG_01307 2.9e-287 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
CLDPABDG_01308 2.1e-106 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
CLDPABDG_01309 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
CLDPABDG_01310 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
CLDPABDG_01311 2.4e-164 MA20_14020 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_01312 1.7e-185 MA20_14025 U Binding-protein-dependent transport system inner membrane component
CLDPABDG_01313 1.2e-238 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
CLDPABDG_01314 4.5e-183 K Bacterial regulatory proteins, lacI family
CLDPABDG_01315 0.0 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
CLDPABDG_01316 8.7e-267 xylA 5.3.1.5 G Belongs to the xylose isomerase family
CLDPABDG_01317 1.2e-249 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
CLDPABDG_01318 2.4e-270 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
CLDPABDG_01319 1.6e-62 S Membrane
CLDPABDG_01320 8.3e-35 S Membrane
CLDPABDG_01321 1.7e-16 ydcZ S Putative inner membrane exporter, YdcZ
CLDPABDG_01322 5.8e-95 ykoE S ABC-type cobalt transport system, permease component
CLDPABDG_01323 7.6e-56 xylR GK ROK family
CLDPABDG_01324 5.3e-140 xylR GK ROK family
CLDPABDG_01325 5.9e-17 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
CLDPABDG_01326 1.3e-128 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
CLDPABDG_01327 2.1e-168 F Inosine-uridine preferring nucleoside hydrolase
CLDPABDG_01328 1.2e-224 bdhA C Iron-containing alcohol dehydrogenase
CLDPABDG_01329 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
CLDPABDG_01330 1.6e-113 L Integrase core domain
CLDPABDG_01331 0.0 3.2.1.8 G Glycosyl hydrolase family 10
CLDPABDG_01332 7e-143 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
CLDPABDG_01333 0.0 O Highly conserved protein containing a thioredoxin domain
CLDPABDG_01334 8.5e-243 S zinc finger
CLDPABDG_01335 9.5e-66 S Bacterial PH domain
CLDPABDG_01336 1.5e-76
CLDPABDG_01337 6.1e-301 KL Domain of unknown function (DUF3427)
CLDPABDG_01338 4.1e-71 L Transposase IS200 like
CLDPABDG_01339 4.1e-222 L Psort location Cytoplasmic, score 8.87
CLDPABDG_01340 3.4e-21 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
CLDPABDG_01341 0.0 helD 3.6.4.12 L Psort location Cytoplasmic, score 8.87
CLDPABDG_01342 2e-183 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
CLDPABDG_01343 2.5e-73 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
CLDPABDG_01344 6.2e-232 aspB E Aminotransferase class-V
CLDPABDG_01345 1.9e-178 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
CLDPABDG_01346 2e-124 tmp1 S Domain of unknown function (DUF4391)
CLDPABDG_01347 6.7e-201 S Endonuclease/Exonuclease/phosphatase family
CLDPABDG_01349 7e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLDPABDG_01350 1.3e-243 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLDPABDG_01351 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
CLDPABDG_01352 3.6e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLDPABDG_01353 1.8e-156 hgdC I BadF/BadG/BcrA/BcrD ATPase family
CLDPABDG_01354 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
CLDPABDG_01355 1.7e-256 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
CLDPABDG_01356 5.7e-120 K Bacterial regulatory proteins, tetR family
CLDPABDG_01357 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
CLDPABDG_01358 1.5e-112 K Bacterial regulatory proteins, tetR family
CLDPABDG_01359 1.2e-236 G Transporter major facilitator family protein
CLDPABDG_01361 1.9e-274 srfJ1 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
CLDPABDG_01362 6.2e-134 K transcriptional regulator
CLDPABDG_01363 7.2e-223 blt G MFS/sugar transport protein
CLDPABDG_01364 0.0 3.2.1.55 GH51 G Alpha-L-arabinofuranosidase C-terminus
CLDPABDG_01365 6e-251 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
CLDPABDG_01366 0.0 3.2.1.37 GH43 G Glycosyl hydrolases family 43
CLDPABDG_01367 3.1e-239 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
CLDPABDG_01368 2.3e-108 K Bacterial regulatory proteins, tetR family
CLDPABDG_01369 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
CLDPABDG_01370 6.1e-221 lmrB U Major Facilitator Superfamily
CLDPABDG_01371 4.9e-14 K helix_turn_helix, mercury resistance
CLDPABDG_01372 8.9e-118 K Periplasmic binding protein domain
CLDPABDG_01373 7.4e-215 EGP Major facilitator Superfamily
CLDPABDG_01374 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
CLDPABDG_01375 2.8e-177 G Transporter major facilitator family protein
CLDPABDG_01376 2.8e-184 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
CLDPABDG_01377 2.1e-105 K Bacterial regulatory proteins, tetR family
CLDPABDG_01378 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
CLDPABDG_01379 3.8e-128 K MarR family
CLDPABDG_01380 0.0 V ABC transporter, ATP-binding protein
CLDPABDG_01381 0.0 V ABC transporter transmembrane region
CLDPABDG_01382 1.4e-93 5.3.1.27 G SIS domain
CLDPABDG_01383 8.1e-131 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
CLDPABDG_01384 7.5e-127 glcR 3.6.4.12 K transcriptional regulator (DeoR family)
CLDPABDG_01385 9e-135 5.3.1.15 S Pfam:DUF1498
CLDPABDG_01386 1.2e-142 2.7.1.4 G pfkB family carbohydrate kinase
CLDPABDG_01387 4.1e-190 G Domain of unknown function (DUF4432)
CLDPABDG_01388 4.5e-213 xylE U Sugar (and other) transporter
CLDPABDG_01389 9e-184 lacR K Transcriptional regulator, LacI family
CLDPABDG_01390 2.3e-257 lacS G Psort location CytoplasmicMembrane, score 10.00
CLDPABDG_01391 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CLDPABDG_01392 1.2e-25
CLDPABDG_01393 1.5e-121 S Phospholipase/Carboxylesterase
CLDPABDG_01394 4.2e-244 patB 4.4.1.8 E Aminotransferase, class I II
CLDPABDG_01395 5.1e-187 K LysR substrate binding domain protein
CLDPABDG_01396 3.2e-185 S Helix-turn-helix domain
CLDPABDG_01397 4.5e-17
CLDPABDG_01398 4.7e-25
CLDPABDG_01399 4.4e-116
CLDPABDG_01400 5.2e-65
CLDPABDG_01402 2.2e-204 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CLDPABDG_01403 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLDPABDG_01404 3.8e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
CLDPABDG_01405 1e-47 S Domain of unknown function (DUF4193)
CLDPABDG_01406 3.4e-146 S Protein of unknown function (DUF3071)
CLDPABDG_01407 5.6e-228 S Type I phosphodiesterase / nucleotide pyrophosphatase
CLDPABDG_01408 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
CLDPABDG_01409 0.0 lhr L DEAD DEAH box helicase
CLDPABDG_01410 5.8e-32 yozG K Cro/C1-type HTH DNA-binding domain
CLDPABDG_01411 2.4e-79 S Protein of unknown function (DUF2975)
CLDPABDG_01412 7.3e-242 T PhoQ Sensor
CLDPABDG_01413 3.4e-222 G Major Facilitator Superfamily
CLDPABDG_01414 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
CLDPABDG_01415 9.7e-173 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CLDPABDG_01416 1.1e-118
CLDPABDG_01417 2e-197 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
CLDPABDG_01418 0.0 pknL 2.7.11.1 KLT PASTA
CLDPABDG_01419 4.3e-132 plsC2 2.3.1.51 I Phosphate acyltransferases
CLDPABDG_01420 3.8e-97
CLDPABDG_01421 3.4e-194 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CLDPABDG_01422 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CLDPABDG_01423 3.3e-118 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLDPABDG_01424 1.5e-121 recX S Modulates RecA activity
CLDPABDG_01425 5.4e-212 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CLDPABDG_01426 4.3e-46 S Protein of unknown function (DUF3046)
CLDPABDG_01427 1.6e-80 K Helix-turn-helix XRE-family like proteins
CLDPABDG_01428 6.1e-97 cinA 3.5.1.42 S Belongs to the CinA family
CLDPABDG_01429 4.1e-124 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLDPABDG_01430 0.0 ftsK D FtsK SpoIIIE family protein
CLDPABDG_01431 1.9e-192 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CLDPABDG_01432 1e-281 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CLDPABDG_01433 4.2e-155 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
CLDPABDG_01434 2.6e-175 ydeD EG EamA-like transporter family
CLDPABDG_01435 1.7e-127 ybhL S Belongs to the BI1 family
CLDPABDG_01436 6.7e-60 S Domain of unknown function (DUF5067)
CLDPABDG_01437 5.1e-243 T Histidine kinase
CLDPABDG_01438 1.8e-127 K helix_turn_helix, Lux Regulon
CLDPABDG_01439 0.0 S Protein of unknown function DUF262
CLDPABDG_01440 9e-116 K helix_turn_helix, Lux Regulon
CLDPABDG_01441 4.1e-240 T Histidine kinase
CLDPABDG_01442 2.9e-190 V ATPases associated with a variety of cellular activities
CLDPABDG_01443 1.2e-222 V ABC-2 family transporter protein
CLDPABDG_01444 7.6e-228 V ABC-2 family transporter protein
CLDPABDG_01445 1.2e-207 rhaR1 K helix_turn_helix, arabinose operon control protein
CLDPABDG_01446 4.4e-107 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
CLDPABDG_01447 4.3e-245 VP1224 V Psort location CytoplasmicMembrane, score 9.99
CLDPABDG_01448 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CLDPABDG_01449 0.0 ctpE P E1-E2 ATPase
CLDPABDG_01450 7.5e-74
CLDPABDG_01451 4.8e-243 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLDPABDG_01452 5.9e-132 S Protein of unknown function (DUF3159)
CLDPABDG_01453 8.3e-151 S Protein of unknown function (DUF3710)
CLDPABDG_01454 2.6e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
CLDPABDG_01455 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
CLDPABDG_01456 9e-157 dppC EP N-terminal TM domain of oligopeptide transport permease C
CLDPABDG_01457 7.5e-153 dppB EP Binding-protein-dependent transport system inner membrane component
CLDPABDG_01458 1.2e-208 E ABC transporter, substrate-binding protein, family 5
CLDPABDG_01459 4e-65 E ABC transporter, substrate-binding protein, family 5
CLDPABDG_01460 3.3e-58 E ABC transporter, substrate-binding protein, family 5
CLDPABDG_01461 3e-99 E ABC transporter, substrate-binding protein, family 5
CLDPABDG_01462 6.1e-171 xerC D Belongs to the 'phage' integrase family. XerC subfamily
CLDPABDG_01463 2.8e-34
CLDPABDG_01464 2.9e-193 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
CLDPABDG_01465 3.4e-188 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
CLDPABDG_01466 8.8e-104
CLDPABDG_01467 0.0 typA T Elongation factor G C-terminus
CLDPABDG_01468 1.1e-248 naiP U Sugar (and other) transporter
CLDPABDG_01469 2.1e-151 nrtR 3.6.1.55 F NUDIX hydrolase
CLDPABDG_01470 6.8e-153 soj D CobQ CobB MinD ParA nucleotide binding domain protein
CLDPABDG_01471 5.9e-177 xerD D recombinase XerD
CLDPABDG_01472 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CLDPABDG_01473 2.1e-25 rpmI J Ribosomal protein L35
CLDPABDG_01474 1.6e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CLDPABDG_01475 3.7e-110 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
CLDPABDG_01476 1.8e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CLDPABDG_01477 2.1e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLDPABDG_01478 4.6e-172 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CLDPABDG_01479 4.8e-187 galM 5.1.3.3 G Aldose 1-epimerase
CLDPABDG_01480 7.3e-39
CLDPABDG_01481 1.9e-95 sigH K Belongs to the sigma-70 factor family. ECF subfamily
CLDPABDG_01482 4.6e-280 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLDPABDG_01483 3.5e-188 V Acetyltransferase (GNAT) domain
CLDPABDG_01484 9.1e-295 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
CLDPABDG_01485 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
CLDPABDG_01486 1.3e-96 3.6.1.55 F NUDIX domain
CLDPABDG_01487 0.0 P Belongs to the ABC transporter superfamily
CLDPABDG_01488 1.8e-191 dppC EP Binding-protein-dependent transport system inner membrane component
CLDPABDG_01489 1.7e-188 dppB EP Binding-protein-dependent transport system inner membrane component
CLDPABDG_01490 4.7e-307 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
CLDPABDG_01491 1.7e-218 GK ROK family
CLDPABDG_01492 2.4e-164 2.7.1.4 G pfkB family carbohydrate kinase
CLDPABDG_01493 3.5e-220 S Metal-independent alpha-mannosidase (GH125)
CLDPABDG_01494 1.6e-27
CLDPABDG_01495 8.4e-248 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
CLDPABDG_01496 1.7e-140 ftsQ 6.3.2.4 D Cell division protein FtsQ
CLDPABDG_01497 2.3e-271 murC 6.3.2.8 M Belongs to the MurCDEF family
CLDPABDG_01498 6.3e-216 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CLDPABDG_01499 8.1e-203 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
CLDPABDG_01500 2.1e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CLDPABDG_01501 8.8e-193 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLDPABDG_01502 1.3e-255 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CLDPABDG_01503 1.1e-148 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLDPABDG_01504 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
CLDPABDG_01505 6.7e-62 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CLDPABDG_01506 3.8e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CLDPABDG_01507 1.2e-91 mraZ K Belongs to the MraZ family
CLDPABDG_01508 0.0 L DNA helicase
CLDPABDG_01509 2.5e-217 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CLDPABDG_01510 2.9e-84 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CLDPABDG_01511 3e-53 M Lysin motif
CLDPABDG_01512 2.2e-131 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CLDPABDG_01513 4.4e-161 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CLDPABDG_01514 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
CLDPABDG_01515 1.6e-196 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CLDPABDG_01516 3.8e-127
CLDPABDG_01517 1.8e-197 1.1.1.22 M UDP binding domain
CLDPABDG_01518 4.2e-133 ykoT 2.4.1.83 GT2 M Glycosyl transferase family 2
CLDPABDG_01519 3.2e-63 S oligosaccharyl transferase activity
CLDPABDG_01520 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
CLDPABDG_01521 1.6e-255 S Domain of unknown function (DUF4143)
CLDPABDG_01522 8.3e-232 S AAA domain
CLDPABDG_01523 1e-60
CLDPABDG_01524 1.1e-197 K helix_turn _helix lactose operon repressor
CLDPABDG_01525 5.5e-167 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CLDPABDG_01526 1.1e-259 EGP Major Facilitator Superfamily
CLDPABDG_01527 5.7e-175 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLDPABDG_01528 3.3e-186 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLDPABDG_01529 2.5e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
CLDPABDG_01530 9.7e-70 ssb1 L Single-stranded DNA-binding protein
CLDPABDG_01531 3.5e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CLDPABDG_01532 1.7e-70 rplI J Binds to the 23S rRNA
CLDPABDG_01533 1.4e-294 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CLDPABDG_01534 1.5e-167 T Pfam Adenylate and Guanylate cyclase catalytic domain
CLDPABDG_01536 7.5e-31 S zinc-ribbon domain
CLDPABDG_01537 9.2e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
CLDPABDG_01538 4.2e-09 M Protein of unknown function (DUF3152)
CLDPABDG_01539 1.1e-52 M Protein of unknown function (DUF3152)
CLDPABDG_01540 1.7e-210 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLDPABDG_01541 2.5e-80
CLDPABDG_01542 6.5e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CLDPABDG_01543 2.3e-164 fahA Q Fumarylacetoacetate (FAA) hydrolase family
CLDPABDG_01544 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CLDPABDG_01545 8e-136 3.6.3.3, 3.6.3.5, 3.6.3.54 P Heavy metal translocating P-type atpase
CLDPABDG_01546 1.1e-168 rmuC S RmuC family
CLDPABDG_01547 2.7e-104 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLDPABDG_01548 3.1e-133 spoU 2.1.1.185 J RNA methyltransferase TrmH family
CLDPABDG_01549 6.2e-134 K Psort location Cytoplasmic, score
CLDPABDG_01550 1.3e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLDPABDG_01551 1.9e-286 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CLDPABDG_01552 8.7e-284 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLDPABDG_01553 2e-205 2.3.1.57 J Acetyltransferase (GNAT) domain
CLDPABDG_01554 2.1e-51 S Protein of unknown function (DUF2469)
CLDPABDG_01555 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
CLDPABDG_01556 9.3e-247 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CLDPABDG_01557 3.7e-79 K helix_turn_helix ASNC type
CLDPABDG_01558 3e-69 tyrA 5.4.99.5 E Chorismate mutase type II
CLDPABDG_01559 0.0 S domain protein
CLDPABDG_01560 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CLDPABDG_01561 1.9e-289 E Bacterial extracellular solute-binding proteins, family 5 Middle
CLDPABDG_01562 9.4e-123 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLDPABDG_01563 4.9e-134 KT Transcriptional regulatory protein, C terminal
CLDPABDG_01564 4.9e-134
CLDPABDG_01565 9.4e-98 mntP P Probably functions as a manganese efflux pump
CLDPABDG_01566 3.4e-91 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CLDPABDG_01567 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
CLDPABDG_01568 3.5e-174 M LPXTG-motif cell wall anchor domain protein
CLDPABDG_01569 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
CLDPABDG_01570 9.7e-192 yfdV S Membrane transport protein
CLDPABDG_01571 5e-273 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CLDPABDG_01572 3.9e-161 L Phage integrase family
CLDPABDG_01573 1.1e-11 xhlB S SPP1 phage holin
CLDPABDG_01574 6.6e-74 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
CLDPABDG_01575 1.4e-21
CLDPABDG_01577 2.5e-28
CLDPABDG_01578 3.2e-156
CLDPABDG_01579 1.9e-196 NT phage tail tape measure protein
CLDPABDG_01580 2.7e-29
CLDPABDG_01581 7.2e-49
CLDPABDG_01582 2.8e-54
CLDPABDG_01583 2.4e-28
CLDPABDG_01584 4.3e-34
CLDPABDG_01585 1.5e-180 S Caudovirus prohead serine protease
CLDPABDG_01586 1.9e-158 S Phage portal protein
CLDPABDG_01587 1.1e-177 S Terminase
CLDPABDG_01588 5e-08
CLDPABDG_01589 8.6e-88 L HNH endonuclease
CLDPABDG_01590 1.4e-14
CLDPABDG_01591 3.3e-30
CLDPABDG_01596 3e-21 K BetR domain
CLDPABDG_01598 5.4e-208 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CLDPABDG_01599 2e-146 atpB C it plays a direct role in the translocation of protons across the membrane
CLDPABDG_01600 8.9e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLDPABDG_01601 4.4e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CLDPABDG_01602 4.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLDPABDG_01603 3.8e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CLDPABDG_01604 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CLDPABDG_01605 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CLDPABDG_01606 3e-44 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
CLDPABDG_01607 2.3e-122 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
CLDPABDG_01608 7e-149 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
CLDPABDG_01609 3.6e-195
CLDPABDG_01610 2.7e-180
CLDPABDG_01611 8.4e-171 trxA2 O Tetratricopeptide repeat
CLDPABDG_01612 4.7e-122 cyaA 4.6.1.1 S CYTH
CLDPABDG_01614 7e-60 psp1 3.5.99.10 J Endoribonuclease L-PSP
CLDPABDG_01615 4.8e-271 mmuP E amino acid
CLDPABDG_01616 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
CLDPABDG_01617 4.5e-299 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CLDPABDG_01618 1.6e-241 hom 1.1.1.3 E Homoserine dehydrogenase
CLDPABDG_01619 1.4e-189 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CLDPABDG_01620 2.4e-286 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
CLDPABDG_01621 4.7e-210 K helix_turn _helix lactose operon repressor
CLDPABDG_01622 0.0 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
CLDPABDG_01623 1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
CLDPABDG_01624 6.3e-298 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
CLDPABDG_01625 0.0 fadD 6.2.1.3 I AMP-binding enzyme
CLDPABDG_01626 0.0 cydD V ABC transporter transmembrane region
CLDPABDG_01627 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
CLDPABDG_01628 3e-128 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CLDPABDG_01629 9.1e-240 G Bacterial extracellular solute-binding protein
CLDPABDG_01630 6e-10
CLDPABDG_01631 1e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
CLDPABDG_01632 1.9e-62 S Protein of unknown function (DUF4235)
CLDPABDG_01633 2.4e-135 G Phosphoglycerate mutase family
CLDPABDG_01634 1.8e-256 amyE G Bacterial extracellular solute-binding protein
CLDPABDG_01635 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
CLDPABDG_01636 1.4e-264 amyE G Bacterial extracellular solute-binding protein
CLDPABDG_01637 5.9e-186 K Periplasmic binding protein-like domain
CLDPABDG_01638 1.7e-182 K Psort location Cytoplasmic, score
CLDPABDG_01639 3.7e-154 msmF G Binding-protein-dependent transport system inner membrane component
CLDPABDG_01640 4e-153 rafG G ABC transporter permease
CLDPABDG_01641 5.8e-106 S Protein of unknown function, DUF624
CLDPABDG_01642 2.9e-13 S Transposon-encoded protein TnpV
CLDPABDG_01643 9.7e-109 pepE 3.4.13.21 E Peptidase family S51
CLDPABDG_01644 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
CLDPABDG_01645 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
CLDPABDG_01646 2.8e-235 malE G Bacterial extracellular solute-binding protein
CLDPABDG_01647 2.1e-247 malF G Binding-protein-dependent transport system inner membrane component
CLDPABDG_01648 6e-163 malG G Binding-protein-dependent transport system inner membrane component
CLDPABDG_01649 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CLDPABDG_01650 5.4e-144 S HAD-hyrolase-like
CLDPABDG_01651 1.4e-142 traX S TraX protein
CLDPABDG_01652 1.3e-193 K Psort location Cytoplasmic, score
CLDPABDG_01654 0.0 M cell wall anchor domain protein
CLDPABDG_01655 3.6e-136 M LPXTG-motif cell wall anchor domain protein
CLDPABDG_01656 6.7e-185 M Cna protein B-type domain
CLDPABDG_01657 2.2e-157 srtC 3.4.22.70 M Sortase family
CLDPABDG_01658 5.1e-125 S membrane transporter protein
CLDPABDG_01659 0.0 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
CLDPABDG_01660 1.3e-145 S Mitochondrial biogenesis AIM24
CLDPABDG_01661 0.0 dnaK O Heat shock 70 kDa protein
CLDPABDG_01662 9.7e-49 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CLDPABDG_01663 3.6e-148 dnaJ1 O DnaJ molecular chaperone homology domain
CLDPABDG_01664 4.5e-115 hspR K transcriptional regulator, MerR family
CLDPABDG_01665 8.6e-47
CLDPABDG_01666 8.7e-130 S HAD hydrolase, family IA, variant 3
CLDPABDG_01668 5.8e-126 dedA S SNARE associated Golgi protein
CLDPABDG_01669 1.6e-17 3.2.1.78 GH26 G Glycosyl hydrolase family 26
CLDPABDG_01670 6.1e-191 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CLDPABDG_01671 1.1e-106
CLDPABDG_01672 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLDPABDG_01673 0.0 cbgA_1 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
CLDPABDG_01675 4.1e-135 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
CLDPABDG_01676 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CLDPABDG_01677 7e-260 lacS G Psort location CytoplasmicMembrane, score 10.00
CLDPABDG_01678 1.6e-210 GK ROK family
CLDPABDG_01679 4.2e-242 G Bacterial extracellular solute-binding protein
CLDPABDG_01680 7.5e-147 G Binding-protein-dependent transport system inner membrane component
CLDPABDG_01681 1.1e-162 G ABC transporter permease
CLDPABDG_01682 1.2e-171 2.7.1.2 GK ROK family
CLDPABDG_01683 0.0 G Glycosyl hydrolase family 20, domain 2
CLDPABDG_01684 1.2e-149 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CLDPABDG_01685 6.3e-222 nagA 3.5.1.25 G Amidohydrolase family
CLDPABDG_01686 6.7e-187 lacR K Transcriptional regulator, LacI family
CLDPABDG_01687 0.0 T Diguanylate cyclase, GGDEF domain
CLDPABDG_01688 4.5e-252 3.2.1.14 GH18 S Carbohydrate binding domain
CLDPABDG_01689 0.0 M probably involved in cell wall
CLDPABDG_01690 2.2e-190 K helix_turn _helix lactose operon repressor
CLDPABDG_01691 5.1e-256 G Bacterial extracellular solute-binding protein
CLDPABDG_01692 3.2e-159 G Binding-protein-dependent transport system inner membrane component
CLDPABDG_01693 3.2e-153 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_01694 7.2e-233 M Protein of unknown function (DUF2961)
CLDPABDG_01695 3.8e-156 I alpha/beta hydrolase fold
CLDPABDG_01696 5e-27 S Psort location Cytoplasmic, score 8.87
CLDPABDG_01697 9.7e-216 lipA I Hydrolase, alpha beta domain protein
CLDPABDG_01698 0.0 mdlA2 V ABC transporter
CLDPABDG_01699 0.0 yknV V ABC transporter
CLDPABDG_01700 2e-124
CLDPABDG_01701 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
CLDPABDG_01702 1.2e-186 G domain, Protein
CLDPABDG_01703 6.9e-175 K helix_turn _helix lactose operon repressor
CLDPABDG_01704 3.8e-257 G Alpha galactosidase A
CLDPABDG_01705 0.0 G Alpha-L-arabinofuranosidase C-terminus
CLDPABDG_01706 1.5e-183 tatD L TatD related DNase
CLDPABDG_01707 0.0 kup P Transport of potassium into the cell
CLDPABDG_01708 1e-167 S Glutamine amidotransferase domain
CLDPABDG_01709 5.1e-150 T HD domain
CLDPABDG_01710 2.9e-157 V ABC transporter
CLDPABDG_01711 5.2e-240 V ABC transporter permease
CLDPABDG_01712 0.0 S Psort location CytoplasmicMembrane, score 9.99
CLDPABDG_01713 8.8e-287 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
CLDPABDG_01714 2.1e-109 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CLDPABDG_01715 7.3e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CLDPABDG_01716 0.0 eccCa D FtsK/SpoIIIE family
CLDPABDG_01717 8.1e-156 T Forkhead associated domain
CLDPABDG_01718 1.1e-190
CLDPABDG_01719 4.4e-55
CLDPABDG_01720 4.8e-188
CLDPABDG_01721 7e-70
CLDPABDG_01722 1.4e-45
CLDPABDG_01723 2.5e-182
CLDPABDG_01724 8.2e-289 O Subtilase family
CLDPABDG_01726 1.5e-43 S Proteins of 100 residues with WXG
CLDPABDG_01727 1.1e-47 esxU S Proteins of 100 residues with WXG
CLDPABDG_01728 1e-225 snm S WXG100 protein secretion system (Wss), protein YukD
CLDPABDG_01729 0.0 O Type VII secretion system ESX-1, transport TM domain B
CLDPABDG_01730 5e-169
CLDPABDG_01731 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
CLDPABDG_01733 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CLDPABDG_01734 3.2e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLDPABDG_01735 0.0 pacS 3.6.3.54 P E1-E2 ATPase
CLDPABDG_01736 9.3e-50 csoR S Metal-sensitive transcriptional repressor
CLDPABDG_01737 6e-132 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CLDPABDG_01738 8.8e-243 G Major Facilitator Superfamily
CLDPABDG_01739 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
CLDPABDG_01740 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
CLDPABDG_01741 9.8e-261 KLT Protein tyrosine kinase
CLDPABDG_01742 0.0 S Fibronectin type 3 domain
CLDPABDG_01743 3.1e-227 S ATPase family associated with various cellular activities (AAA)
CLDPABDG_01744 8.3e-221 S Protein of unknown function DUF58
CLDPABDG_01745 0.0 E Transglutaminase-like superfamily
CLDPABDG_01746 4.4e-163 3.1.3.16 T Sigma factor PP2C-like phosphatases
CLDPABDG_01747 1.3e-104 B Belongs to the OprB family
CLDPABDG_01748 4.1e-101 T Forkhead associated domain
CLDPABDG_01749 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLDPABDG_01750 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLDPABDG_01751 6.8e-100
CLDPABDG_01752 1.8e-181 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
CLDPABDG_01753 3.3e-126 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CLDPABDG_01754 7.2e-253 S UPF0210 protein
CLDPABDG_01755 7.1e-43 gcvR T Belongs to the UPF0237 family
CLDPABDG_01756 1.1e-23 lmrB EGP Major facilitator Superfamily
CLDPABDG_01757 9e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
CLDPABDG_01758 4e-250 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
CLDPABDG_01759 7.7e-141 glpR K DeoR C terminal sensor domain
CLDPABDG_01760 8.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
CLDPABDG_01761 5.1e-220 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
CLDPABDG_01762 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
CLDPABDG_01763 2.3e-133 glxR K helix_turn_helix, cAMP Regulatory protein
CLDPABDG_01764 9.1e-217 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
CLDPABDG_01765 2.9e-86 J TM2 domain
CLDPABDG_01766 8.4e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
CLDPABDG_01767 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
CLDPABDG_01768 1.5e-236 S Uncharacterized conserved protein (DUF2183)
CLDPABDG_01769 1e-69 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
CLDPABDG_01770 1.8e-206 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
CLDPABDG_01771 3.8e-159 mhpC I Alpha/beta hydrolase family
CLDPABDG_01772 1.7e-113 F Domain of unknown function (DUF4916)
CLDPABDG_01773 1.3e-60 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
CLDPABDG_01774 1.6e-169 S G5
CLDPABDG_01775 4.6e-88
CLDPABDG_01777 2.7e-262 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
CLDPABDG_01778 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
CLDPABDG_01779 2.5e-147 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_01780 1.7e-162 P Binding-protein-dependent transport system inner membrane component
CLDPABDG_01781 3e-270 G Bacterial extracellular solute-binding protein
CLDPABDG_01782 1.1e-184 K Psort location Cytoplasmic, score
CLDPABDG_01783 5.8e-56 yccF S Inner membrane component domain
CLDPABDG_01784 3.1e-131 S Psort location CytoplasmicMembrane, score 9.99
CLDPABDG_01785 9.7e-230 S Bacteriophage abortive infection AbiH
CLDPABDG_01786 2.5e-169 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CLDPABDG_01787 1.7e-56 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CLDPABDG_01788 5.7e-175 terC P Integral membrane protein, TerC family
CLDPABDG_01789 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CLDPABDG_01790 1.5e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CLDPABDG_01791 8.3e-255 rpsA J Ribosomal protein S1
CLDPABDG_01792 1.9e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CLDPABDG_01793 2.9e-172 P Zinc-uptake complex component A periplasmic
CLDPABDG_01794 2e-160 znuC P ATPases associated with a variety of cellular activities
CLDPABDG_01795 1e-140 znuB U ABC 3 transport family
CLDPABDG_01796 1.7e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
CLDPABDG_01797 3e-102 carD K CarD-like/TRCF domain
CLDPABDG_01798 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CLDPABDG_01799 2e-129 T Response regulator receiver domain protein
CLDPABDG_01800 6.8e-188 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CLDPABDG_01801 2.5e-138 ctsW S Phosphoribosyl transferase domain
CLDPABDG_01802 1.1e-152 cof 5.2.1.8 T Eukaryotic phosphomannomutase
CLDPABDG_01803 1.5e-71 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
CLDPABDG_01804 8.7e-223
CLDPABDG_01805 0.0 S Glycosyl transferase, family 2
CLDPABDG_01806 3.4e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
CLDPABDG_01807 1.7e-199 K Cell envelope-related transcriptional attenuator domain
CLDPABDG_01809 6.9e-170 K Cell envelope-related transcriptional attenuator domain
CLDPABDG_01810 0.0 D FtsK/SpoIIIE family
CLDPABDG_01811 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
CLDPABDG_01812 6e-277 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CLDPABDG_01813 1.2e-142 yplQ S Haemolysin-III related
CLDPABDG_01814 2.6e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CLDPABDG_01815 1.2e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
CLDPABDG_01816 7.2e-283 sdaA 4.3.1.17 E Serine dehydratase alpha chain
CLDPABDG_01817 1.8e-91
CLDPABDG_01819 4.4e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
CLDPABDG_01820 2e-103 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
CLDPABDG_01821 2e-71 divIC D Septum formation initiator
CLDPABDG_01822 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CLDPABDG_01823 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CLDPABDG_01824 1.7e-113 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CLDPABDG_01825 8e-99 2.3.1.183 M Acetyltransferase (GNAT) domain
CLDPABDG_01826 0.0 S Uncharacterised protein family (UPF0182)
CLDPABDG_01827 6.9e-178 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
CLDPABDG_01828 6.2e-40 ybdD S Selenoprotein, putative
CLDPABDG_01829 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
CLDPABDG_01830 1.3e-51 azlD E Branched-chain amino acid transport protein (AzlD)
CLDPABDG_01831 2.9e-134 azlC E AzlC protein
CLDPABDG_01832 8.1e-85 M Protein of unknown function (DUF3737)
CLDPABDG_01833 6.7e-81 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CLDPABDG_01834 1.3e-145 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CLDPABDG_01835 2.6e-180 opcA G Glucose-6-phosphate dehydrogenase subunit
CLDPABDG_01836 3.6e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CLDPABDG_01837 9.4e-219 patB 4.4.1.8 E Aminotransferase, class I II
CLDPABDG_01838 5.3e-147 S Belongs to the short-chain dehydrogenases reductases (SDR) family
CLDPABDG_01839 1.2e-277 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CLDPABDG_01840 0.0 lysX S Uncharacterised conserved protein (DUF2156)
CLDPABDG_01841 1.1e-259 S Putative esterase
CLDPABDG_01842 1.2e-34 S Psort location Cytoplasmic, score 8.87
CLDPABDG_01843 3.9e-125 ybbL V ATPases associated with a variety of cellular activities
CLDPABDG_01844 1.8e-134 ybbM V Uncharacterised protein family (UPF0014)
CLDPABDG_01845 6e-275 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
CLDPABDG_01846 2.1e-126 S Enoyl-(Acyl carrier protein) reductase
CLDPABDG_01847 2.4e-234 rutG F Permease family
CLDPABDG_01848 7.3e-160 3.1.3.73 G Phosphoglycerate mutase family
CLDPABDG_01849 1.4e-141 K helix_turn_helix, arabinose operon control protein
CLDPABDG_01850 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
CLDPABDG_01851 5.8e-38 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
CLDPABDG_01852 1.8e-84 O peptidyl-tyrosine sulfation
CLDPABDG_01853 2.4e-74 S Psort location Cytoplasmic, score 8.87
CLDPABDG_01854 6.9e-121 S Psort location Cytoplasmic, score 8.87
CLDPABDG_01855 2.5e-86 3.1.21.3 V type I restriction modification DNA specificity domain

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)