| ORF_ID | e_value | Gene_name | EC_number | CAZy | COGs | Description |
|---|---|---|---|---|---|---|
| MICLOGIA_00001 | 1.1e-15 | rpmH | J | Belongs to the bacterial ribosomal protein bL34 family | ||
| MICLOGIA_00002 | 1.6e-244 | dnaA | L | it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids | ||
| MICLOGIA_00003 | 4.2e-182 | dnaN | 2.7.7.7 | L | Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria | |
| MICLOGIA_00004 | 2.6e-35 | yaaA | S | S4 domain protein YaaA | ||
| MICLOGIA_00005 | 1.1e-209 | recF | L | it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP | ||
| MICLOGIA_00006 | 0.0 | gyrB | 5.99.1.3 | L | A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner | |
| MICLOGIA_00007 | 0.0 | gyrA | 5.99.1.3 | L | A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner | |
| MICLOGIA_00008 | 2.7e-48 | rpsF | J | Binds together with S18 to 16S ribosomal RNA | ||
| MICLOGIA_00009 | 4.5e-78 | ssb | L | Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism | ||
| MICLOGIA_00010 | 1.2e-35 | rpsR | J | Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit | ||
| MICLOGIA_00011 | 2.7e-194 | S | Uncharacterised protein family (UPF0236) | |||
| MICLOGIA_00012 | 0.0 | yybT | T | signaling protein consisting of a modified GGDEF domain and a DHH domain | ||
| MICLOGIA_00013 | 5.7e-69 | rplI | J | Binds to the 23S rRNA | ||
| MICLOGIA_00014 | 1.9e-253 | dnaB | 3.6.4.12 | L | Participates in initiation and elongation during chromosome replication | |
| MICLOGIA_00015 | 3.3e-271 | L | Transposase | |||
| MICLOGIA_00016 | 3.3e-164 | phnD | P | ABC transporter, phosphonate, periplasmic substrate-binding protein | ||
| MICLOGIA_00017 | 5.2e-170 | degV | S | DegV family | ||
| MICLOGIA_00018 | 1.1e-135 | V | ABC transporter transmembrane region | |||
| MICLOGIA_00019 | 1.8e-167 | scrK | 2.7.1.2, 2.7.1.4 | GK | ROK family | |
| MICLOGIA_00021 | 1.4e-16 | |||||
| MICLOGIA_00022 | 8.2e-302 | L | Transposase | |||
| MICLOGIA_00023 | 1.1e-150 | I | Protein of unknown function (DUF2974) | |||
| MICLOGIA_00024 | 1.1e-163 | L | An automated process has identified a potential problem with this gene model | |||
| MICLOGIA_00025 | 4.5e-56 | I | Protein of unknown function (DUF2974) | |||
| MICLOGIA_00026 | 1.9e-116 | yhiD | S | MgtC family | ||
| MICLOGIA_00028 | 1.4e-18 | K | Helix-turn-helix XRE-family like proteins | |||
| MICLOGIA_00029 | 6.9e-64 | |||||
| MICLOGIA_00030 | 2.6e-84 | |||||
| MICLOGIA_00031 | 1.4e-134 | D | Ftsk spoiiie family protein | |||
| MICLOGIA_00032 | 5.1e-145 | S | Replication initiation factor | |||
| MICLOGIA_00033 | 3.9e-55 | |||||
| MICLOGIA_00034 | 3.6e-39 | C | FMN_bind | |||
| MICLOGIA_00035 | 1.5e-81 | |||||
| MICLOGIA_00036 | 1.3e-176 | iunH | 3.2.2.1 | F | inosine-uridine preferring nucleoside hydrolase | |
| MICLOGIA_00037 | 2e-85 | alkD | L | DNA alkylation repair enzyme | ||
| MICLOGIA_00038 | 9.9e-293 | celA | 3.2.1.86 | GT1 | G | Belongs to the glycosyl hydrolase 1 family |
| MICLOGIA_00039 | 6.4e-128 | K | UTRA domain | |||
| MICLOGIA_00040 | 1e-54 | celA1 | 2.7.1.196, 2.7.1.205 | G | PTS system, Lactose/Cellobiose specific IIB subunit | |
| MICLOGIA_00041 | 8.7e-60 | chbA | 2.7.1.196, 2.7.1.205 | G | PTS system, Lactose Cellobiose specific IIA subunit | |
| MICLOGIA_00042 | 8.4e-265 | S | Fibronectin type III domain | |||
| MICLOGIA_00043 | 4.5e-241 | tyrS | 6.1.1.1 | J | Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) | |
| MICLOGIA_00044 | 3.4e-53 | |||||
| MICLOGIA_00046 | 4.6e-257 | pepC | 3.4.22.40 | E | aminopeptidase | |
| MICLOGIA_00047 | 1.3e-122 | ypgQ | S | Metal dependent phosphohydrolases with conserved 'HD' motif. | ||
| MICLOGIA_00048 | 1.7e-301 | oppA | E | ABC transporter, substratebinding protein | ||
| MICLOGIA_00049 | 1.6e-310 | oppA | E | ABC transporter, substratebinding protein | ||
| MICLOGIA_00050 | 3.1e-209 | guaB | 1.1.1.205 | F | Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides | |
| MICLOGIA_00051 | 1.1e-146 | oppB | P | ABC-type dipeptide oligopeptide nickel transport systems, permease components | ||
| MICLOGIA_00052 | 8e-188 | oppC | EP | ABC-type dipeptide oligopeptide nickel transport systems, permease components | ||
| MICLOGIA_00053 | 2.7e-199 | oppD | P | Belongs to the ABC transporter superfamily | ||
| MICLOGIA_00054 | 1.9e-175 | oppF | P | Belongs to the ABC transporter superfamily | ||
| MICLOGIA_00055 | 1.4e-256 | pepC | 3.4.22.40 | E | aminopeptidase | |
| MICLOGIA_00056 | 3.9e-72 | hsp | O | Belongs to the small heat shock protein (HSP20) family | ||
| MICLOGIA_00057 | 1.3e-28 | greA | K | Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides | ||
| MICLOGIA_00058 | 6e-112 | |||||
| MICLOGIA_00060 | 1.7e-110 | E | Belongs to the SOS response-associated peptidase family | |||
| MICLOGIA_00061 | 3.7e-193 | trpS | 6.1.1.2 | J | Belongs to the class-I aminoacyl-tRNA synthetase family | |
| MICLOGIA_00062 | 4e-89 | comEB | 3.5.4.12 | F | MafB19-like deaminase | |
| MICLOGIA_00063 | 2e-103 | S | TPM domain | |||
| MICLOGIA_00064 | 2.4e-132 | mgtA | 3.6.3.2 | P | COG0474 Cation transport ATPase | |
| MICLOGIA_00065 | 2.5e-311 | mgtA | 3.6.3.2 | P | COG0474 Cation transport ATPase | |
| MICLOGIA_00066 | 0.0 | metG | 6.1.1.10 | J | Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation | |
| MICLOGIA_00067 | 1e-147 | tatD | L | hydrolase, TatD family | ||
| MICLOGIA_00068 | 1e-99 | rnmV | 3.1.26.8 | J | Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step | |
| MICLOGIA_00069 | 6.7e-151 | ksgA | 2.1.1.182 | J | Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits | |
| MICLOGIA_00070 | 4.5e-39 | veg | S | Biofilm formation stimulator VEG | ||
| MICLOGIA_00071 | 1.5e-147 | purR | 2.4.2.22, 2.4.2.7 | F | pur operon repressor | |
| MICLOGIA_00072 | 2.6e-173 | glmU | 2.3.1.157, 2.7.7.23 | M | Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain | |
| MICLOGIA_00073 | 5.3e-80 | |||||
| MICLOGIA_00074 | 7.8e-292 | S | SLAP domain | |||
| MICLOGIA_00075 | 1.6e-270 | L | Transposase | |||
| MICLOGIA_00076 | 6e-177 | prs | 2.7.6.1 | F | Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) | |
| MICLOGIA_00077 | 4.1e-93 | L | Transposase and inactivated derivatives, IS30 family | |||
| MICLOGIA_00078 | 7.6e-55 | L | Transposase and inactivated derivatives, IS30 family | |||
| MICLOGIA_00079 | 4.2e-172 | 2.7.1.2 | GK | ROK family | ||
| MICLOGIA_00080 | 2.1e-42 | |||||
| MICLOGIA_00081 | 3.6e-268 | ywfO | S | Metal dependent phosphohydrolases with conserved 'HD' motif. | ||
| MICLOGIA_00082 | 6.9e-69 | S | Domain of unknown function (DUF1934) | |||
| MICLOGIA_00083 | 1.5e-46 | rpoE | K | Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling | ||
| MICLOGIA_00084 | 6.7e-311 | pyrG | 6.3.4.2 | F | Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates | |
| MICLOGIA_00085 | 9.6e-247 | murA | 2.5.1.7 | M | Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine | |
| MICLOGIA_00086 | 1.8e-74 | K | acetyltransferase | |||
| MICLOGIA_00087 | 5.7e-285 | pipD | E | Dipeptidase | ||
| MICLOGIA_00088 | 3.7e-156 | msmR | K | AraC-like ligand binding domain | ||
| MICLOGIA_00089 | 1.5e-223 | pbuX | F | xanthine permease | ||
| MICLOGIA_00090 | 9e-104 | xpt | 2.4.2.22, 2.4.2.7 | F | Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis | |
| MICLOGIA_00091 | 2.4e-43 | K | Helix-turn-helix | |||
| MICLOGIA_00092 | 7.8e-304 | guaA | 2.3.1.128, 6.3.5.2 | F | Catalyzes the synthesis of GMP from XMP | |
| MICLOGIA_00094 | 4.9e-99 | L | Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair | |||
| MICLOGIA_00095 | 3.6e-225 | 3.2.1.18 | GH33 | M | Rib/alpha-like repeat | |
| MICLOGIA_00096 | 2e-222 | L | Transposase | |||
| MICLOGIA_00097 | 9.5e-247 | 3.2.1.18 | GH33 | M | Rib/alpha-like repeat | |
| MICLOGIA_00099 | 1.7e-77 | 2.5.1.74 | H | UbiA prenyltransferase family | ||
| MICLOGIA_00100 | 1e-95 | |||||
| MICLOGIA_00101 | 8.8e-223 | L | Transposase | |||
| MICLOGIA_00102 | 1.3e-141 | yfeO | P | Voltage gated chloride channel | ||
| MICLOGIA_00103 | 1.4e-184 | 5.3.3.2 | C | FMN-dependent dehydrogenase | ||
| MICLOGIA_00104 | 1.4e-51 | |||||
| MICLOGIA_00105 | 2.1e-42 | |||||
| MICLOGIA_00106 | 6.4e-232 | glyA | 2.1.2.1 | E | Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism |
Showing 1 to 100 of 2,187 entries
eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)