ORF_ID e_value Gene_name EC_number CAZy COGs Description
MDLDOOCB_00001 2.5e-148 S Protein of unknown function (DUF805)
MDLDOOCB_00002 3.4e-135 glnQ E ABC transporter, ATP-binding protein
MDLDOOCB_00003 1.3e-290 glnP P ABC transporter permease
MDLDOOCB_00004 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
MDLDOOCB_00005 5.8e-64 yeaO S Protein of unknown function, DUF488
MDLDOOCB_00006 2.1e-124 terC P Integral membrane protein TerC family
MDLDOOCB_00007 2.1e-91 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
MDLDOOCB_00008 5.2e-130 cobB K SIR2 family
MDLDOOCB_00009 4.2e-86
MDLDOOCB_00010 4.6e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MDLDOOCB_00011 1.3e-181 S Alpha/beta hydrolase of unknown function (DUF915)
MDLDOOCB_00012 2.3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MDLDOOCB_00013 2e-140 ypuA S Protein of unknown function (DUF1002)
MDLDOOCB_00014 5e-129 znuB U ABC 3 transport family
MDLDOOCB_00015 1.6e-117 fhuC P ABC transporter
MDLDOOCB_00016 1.4e-148 psaA P Belongs to the bacterial solute-binding protein 9 family
MDLDOOCB_00017 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
MDLDOOCB_00018 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
MDLDOOCB_00019 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
MDLDOOCB_00020 1.8e-136 fruR K DeoR C terminal sensor domain
MDLDOOCB_00021 1.8e-218 natB CP ABC-2 family transporter protein
MDLDOOCB_00022 1.1e-164 natA S ABC transporter, ATP-binding protein
MDLDOOCB_00023 1.7e-67
MDLDOOCB_00024 2e-23
MDLDOOCB_00025 8.2e-31 yozG K Transcriptional regulator
MDLDOOCB_00026 3.7e-83
MDLDOOCB_00027 3e-21
MDLDOOCB_00031 2.2e-129 blpT
MDLDOOCB_00032 1.4e-107 M Transport protein ComB
MDLDOOCB_00033 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
MDLDOOCB_00034 1.2e-127 K LytTr DNA-binding domain
MDLDOOCB_00035 4.4e-138 2.7.13.3 T GHKL domain
MDLDOOCB_00036 1.2e-16
MDLDOOCB_00037 2.1e-255 S Archaea bacterial proteins of unknown function
MDLDOOCB_00038 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
MDLDOOCB_00039 3e-270 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
MDLDOOCB_00040 1e-24
MDLDOOCB_00041 9.5e-26
MDLDOOCB_00042 2.5e-33
MDLDOOCB_00043 1.4e-53 S Enterocin A Immunity
MDLDOOCB_00044 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
MDLDOOCB_00045 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
MDLDOOCB_00046 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
MDLDOOCB_00047 9.6e-121 K response regulator
MDLDOOCB_00049 0.0 V ABC transporter
MDLDOOCB_00050 4.2e-144 V ABC transporter, ATP-binding protein
MDLDOOCB_00051 1.2e-145 V ABC transporter, ATP-binding protein
MDLDOOCB_00052 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
MDLDOOCB_00053 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
MDLDOOCB_00054 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
MDLDOOCB_00055 8.5e-154 spo0J K Belongs to the ParB family
MDLDOOCB_00056 3.4e-138 soj D Sporulation initiation inhibitor
MDLDOOCB_00057 1.5e-147 noc K Belongs to the ParB family
MDLDOOCB_00058 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
MDLDOOCB_00059 3e-53 cvpA S Colicin V production protein
MDLDOOCB_00060 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
MDLDOOCB_00061 6e-151 3.1.3.48 T Tyrosine phosphatase family
MDLDOOCB_00062 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
MDLDOOCB_00063 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
MDLDOOCB_00064 6.9e-110 K WHG domain
MDLDOOCB_00065 3e-37
MDLDOOCB_00066 1.3e-273 pipD E Dipeptidase
MDLDOOCB_00067 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
MDLDOOCB_00068 3.3e-176 hrtB V ABC transporter permease
MDLDOOCB_00069 3.2e-92 ygfC K Bacterial regulatory proteins, tetR family
MDLDOOCB_00070 3.5e-111 G phosphoglycerate mutase
MDLDOOCB_00071 4.1e-141 aroD S Alpha/beta hydrolase family
MDLDOOCB_00072 2.2e-142 S Belongs to the UPF0246 family
MDLDOOCB_00073 3e-112 L PFAM transposase IS116 IS110 IS902
MDLDOOCB_00074 9e-121
MDLDOOCB_00075 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
MDLDOOCB_00076 2.6e-190 S Putative peptidoglycan binding domain
MDLDOOCB_00077 4e-16
MDLDOOCB_00078 7.9e-92 liaI S membrane
MDLDOOCB_00079 1.7e-70 XK27_02470 K LytTr DNA-binding domain
MDLDOOCB_00081 1.6e-227 L Transposase
MDLDOOCB_00082 5.3e-249 dtpT U amino acid peptide transporter
MDLDOOCB_00083 9.2e-35 L Transposase DDE domain
MDLDOOCB_00084 3.7e-260 L Transposase
MDLDOOCB_00085 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MDLDOOCB_00086 7.9e-73 nrdI F NrdI Flavodoxin like
MDLDOOCB_00087 1.4e-192 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MDLDOOCB_00088 2.5e-276 phoR 2.7.13.3 T Histidine kinase
MDLDOOCB_00089 8.9e-119 T Transcriptional regulatory protein, C terminal
MDLDOOCB_00090 1.2e-104 phoU P Plays a role in the regulation of phosphate uptake
MDLDOOCB_00091 4.3e-138 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
MDLDOOCB_00092 4.6e-152 pstA P Phosphate transport system permease protein PstA
MDLDOOCB_00093 4.6e-155 pstC P probably responsible for the translocation of the substrate across the membrane
MDLDOOCB_00094 3.2e-145 pstS P Phosphate
MDLDOOCB_00095 3.2e-26 xerC L Phage integrase, N-terminal SAM-like domain
MDLDOOCB_00096 2.3e-82 yveB 2.7.4.29 I PAP2 superfamily
MDLDOOCB_00097 3.7e-174 L Bifunctional protein
MDLDOOCB_00098 0.0 pepN 3.4.11.2 E aminopeptidase
MDLDOOCB_00099 2.8e-47 lysM M LysM domain
MDLDOOCB_00100 4.8e-174
MDLDOOCB_00101 3.3e-99 mdtG EGP Major facilitator Superfamily
MDLDOOCB_00102 1.7e-100 mdtG EGP Major facilitator Superfamily
MDLDOOCB_00103 6.7e-88 ymdB S Macro domain protein
MDLDOOCB_00105 6.7e-09
MDLDOOCB_00106 1.6e-28
MDLDOOCB_00109 1.5e-59 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_00110 3.3e-147 malG P ABC transporter permease
MDLDOOCB_00111 8.2e-249 malF P Binding-protein-dependent transport system inner membrane component
MDLDOOCB_00112 2.3e-213 malE G Bacterial extracellular solute-binding protein
MDLDOOCB_00113 6.8e-209 msmX P Belongs to the ABC transporter superfamily
MDLDOOCB_00114 9e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
MDLDOOCB_00115 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
MDLDOOCB_00116 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
MDLDOOCB_00117 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
MDLDOOCB_00118 9.8e-49 S PAS domain
MDLDOOCB_00119 2e-203 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MDLDOOCB_00120 3.1e-178 yvdE K helix_turn _helix lactose operon repressor
MDLDOOCB_00121 7e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
MDLDOOCB_00122 1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
MDLDOOCB_00123 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
MDLDOOCB_00124 6.8e-186 G Transmembrane secretion effector
MDLDOOCB_00125 1.2e-201 V ABC transporter transmembrane region
MDLDOOCB_00126 6.5e-64 L RelB antitoxin
MDLDOOCB_00127 2.1e-131 cobQ S glutamine amidotransferase
MDLDOOCB_00128 1.1e-81 M NlpC/P60 family
MDLDOOCB_00130 2.7e-141 L An automated process has identified a potential problem with this gene model
MDLDOOCB_00131 2.3e-36
MDLDOOCB_00132 3.9e-165 EG EamA-like transporter family
MDLDOOCB_00133 5.9e-166 EG EamA-like transporter family
MDLDOOCB_00134 7.3e-83 yicL EG EamA-like transporter family
MDLDOOCB_00135 3.5e-83
MDLDOOCB_00136 1.2e-109
MDLDOOCB_00137 5.4e-15 XK27_05540 S DUF218 domain
MDLDOOCB_00138 9.7e-144 XK27_05540 S DUF218 domain
MDLDOOCB_00139 4.9e-265 yheS_2 S ATPases associated with a variety of cellular activities
MDLDOOCB_00140 7.2e-86
MDLDOOCB_00141 3.9e-57
MDLDOOCB_00142 4.7e-25 S Protein conserved in bacteria
MDLDOOCB_00143 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
MDLDOOCB_00145 1.6e-211 L Transposase
MDLDOOCB_00146 7.3e-21 hicA S HicA toxin of bacterial toxin-antitoxin,
MDLDOOCB_00147 2.1e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MDLDOOCB_00148 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
MDLDOOCB_00149 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
MDLDOOCB_00152 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
MDLDOOCB_00153 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
MDLDOOCB_00154 1.8e-230 steT_1 E amino acid
MDLDOOCB_00155 2.2e-139 puuD S peptidase C26
MDLDOOCB_00157 2.4e-172 V HNH endonuclease
MDLDOOCB_00158 6.4e-135 S PFAM Archaeal ATPase
MDLDOOCB_00159 9.2e-248 yifK E Amino acid permease
MDLDOOCB_00160 9.7e-234 cycA E Amino acid permease
MDLDOOCB_00161 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
MDLDOOCB_00162 0.0 clpE O AAA domain (Cdc48 subfamily)
MDLDOOCB_00163 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
MDLDOOCB_00164 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
MDLDOOCB_00165 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
MDLDOOCB_00166 0.0 XK27_06780 V ABC transporter permease
MDLDOOCB_00167 1.9e-36
MDLDOOCB_00168 7.9e-291 ytgP S Polysaccharide biosynthesis protein
MDLDOOCB_00169 2.7e-137 lysA2 M Glycosyl hydrolases family 25
MDLDOOCB_00170 2.3e-133 S Protein of unknown function (DUF975)
MDLDOOCB_00171 7.6e-177 pbpX2 V Beta-lactamase
MDLDOOCB_00172 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
MDLDOOCB_00173 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
MDLDOOCB_00174 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
MDLDOOCB_00175 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
MDLDOOCB_00176 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
MDLDOOCB_00177 4.1e-44
MDLDOOCB_00178 6.5e-207 ywhK S Membrane
MDLDOOCB_00179 1.5e-80 ykuL S (CBS) domain
MDLDOOCB_00180 0.0 cadA P P-type ATPase
MDLDOOCB_00181 2.8e-205 napA P Sodium/hydrogen exchanger family
MDLDOOCB_00182 1.2e-94 G Glycosyl hydrolases family 8
MDLDOOCB_00183 1.1e-67 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00184 1.4e-95 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00185 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
MDLDOOCB_00186 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
MDLDOOCB_00187 4.1e-276 V ABC transporter transmembrane region
MDLDOOCB_00188 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
MDLDOOCB_00189 5.4e-51
MDLDOOCB_00190 4.2e-154 EGP Major facilitator Superfamily
MDLDOOCB_00191 2.5e-110 ropB K Transcriptional regulator
MDLDOOCB_00192 9.1e-121 S CAAX protease self-immunity
MDLDOOCB_00193 1.5e-189 S DUF218 domain
MDLDOOCB_00194 0.0 macB_3 V ABC transporter, ATP-binding protein
MDLDOOCB_00195 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
MDLDOOCB_00196 8.2e-100 S ECF transporter, substrate-specific component
MDLDOOCB_00197 2.3e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
MDLDOOCB_00198 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
MDLDOOCB_00199 1.5e-283 xylG 3.6.3.17 S ABC transporter
MDLDOOCB_00200 2.5e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
MDLDOOCB_00201 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
MDLDOOCB_00202 1.1e-68 yeaE S Aldo/keto reductase family
MDLDOOCB_00203 1.8e-77 yeaE S Aldo/keto reductase family
MDLDOOCB_00204 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
MDLDOOCB_00205 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
MDLDOOCB_00206 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
MDLDOOCB_00207 9.4e-72
MDLDOOCB_00208 7e-139 cof S haloacid dehalogenase-like hydrolase
MDLDOOCB_00209 2.2e-230 pbuG S permease
MDLDOOCB_00210 2.1e-76 S ABC-2 family transporter protein
MDLDOOCB_00211 4.7e-60 S ABC-2 family transporter protein
MDLDOOCB_00212 1.7e-93 V ABC transporter, ATP-binding protein
MDLDOOCB_00213 3.5e-180 S Uncharacterised protein family (UPF0236)
MDLDOOCB_00214 2.3e-58
MDLDOOCB_00215 2.5e-119 K helix_turn_helix, mercury resistance
MDLDOOCB_00216 2.6e-86 pbuG S permease
MDLDOOCB_00217 1.8e-128 pbuG S permease
MDLDOOCB_00218 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
MDLDOOCB_00219 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
MDLDOOCB_00220 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
MDLDOOCB_00221 1.3e-94 K Transcriptional regulator
MDLDOOCB_00222 6.1e-61 K Transcriptional regulator
MDLDOOCB_00223 2e-225 S cog cog1373
MDLDOOCB_00224 9.7e-146 S haloacid dehalogenase-like hydrolase
MDLDOOCB_00225 2.5e-226 pbuG S permease
MDLDOOCB_00226 2.7e-155 L Transposase
MDLDOOCB_00227 3.2e-32 S Putative adhesin
MDLDOOCB_00228 3.7e-261 V ABC transporter transmembrane region
MDLDOOCB_00229 1.1e-139
MDLDOOCB_00230 1.8e-31
MDLDOOCB_00233 8.1e-37
MDLDOOCB_00234 9.2e-57 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
MDLDOOCB_00235 1.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
MDLDOOCB_00236 0.0 copA 3.6.3.54 P P-type ATPase
MDLDOOCB_00237 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
MDLDOOCB_00238 1.2e-105
MDLDOOCB_00239 7e-248 EGP Sugar (and other) transporter
MDLDOOCB_00240 1.2e-18
MDLDOOCB_00241 2.8e-210
MDLDOOCB_00242 3.5e-136 S SLAP domain
MDLDOOCB_00243 1.3e-117 S SLAP domain
MDLDOOCB_00244 1.1e-106 S Bacteriocin helveticin-J
MDLDOOCB_00245 5.7e-44
MDLDOOCB_00246 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_00247 3.6e-33 E Zn peptidase
MDLDOOCB_00248 3.7e-174 L Bifunctional protein
MDLDOOCB_00249 1.1e-286 clcA P chloride
MDLDOOCB_00250 3.1e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
MDLDOOCB_00251 1.6e-31
MDLDOOCB_00252 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
MDLDOOCB_00253 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
MDLDOOCB_00254 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
MDLDOOCB_00255 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
MDLDOOCB_00256 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
MDLDOOCB_00257 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
MDLDOOCB_00258 2.4e-11 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00259 2.1e-141 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00260 4.2e-160 EGP Major Facilitator Superfamily
MDLDOOCB_00261 2.4e-88 noxC 1.5.1.39 C coenzyme F420-1:gamma-L-glutamate ligase activity
MDLDOOCB_00262 1.1e-22 noxC 1.5.1.39 C coenzyme F420-1:gamma-L-glutamate ligase activity
MDLDOOCB_00263 8.2e-182 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MDLDOOCB_00264 3.8e-160 L hmm pf00665
MDLDOOCB_00265 5.8e-100 L Helix-turn-helix domain
MDLDOOCB_00266 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
MDLDOOCB_00267 3.1e-134
MDLDOOCB_00268 1.3e-258 glnPH2 P ABC transporter permease
MDLDOOCB_00269 1.2e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
MDLDOOCB_00270 6.4e-224 S Cysteine-rich secretory protein family
MDLDOOCB_00271 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
MDLDOOCB_00272 1.4e-112
MDLDOOCB_00273 2.2e-202 yibE S overlaps another CDS with the same product name
MDLDOOCB_00274 1.7e-129 yibF S overlaps another CDS with the same product name
MDLDOOCB_00275 6.7e-145 I alpha/beta hydrolase fold
MDLDOOCB_00276 0.0 G Belongs to the glycosyl hydrolase 31 family
MDLDOOCB_00277 1e-215 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
MDLDOOCB_00278 1.7e-60 L Transposase
MDLDOOCB_00279 5.2e-08
MDLDOOCB_00280 3e-89 ntd 2.4.2.6 F Nucleoside
MDLDOOCB_00281 1.7e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
MDLDOOCB_00282 3.4e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
MDLDOOCB_00283 3e-84 uspA T universal stress protein
MDLDOOCB_00285 1.5e-161 phnD P Phosphonate ABC transporter
MDLDOOCB_00286 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
MDLDOOCB_00287 1.4e-120 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
MDLDOOCB_00288 1.3e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
MDLDOOCB_00289 3.3e-106 tag 3.2.2.20 L glycosylase
MDLDOOCB_00290 3.9e-84
MDLDOOCB_00291 1.7e-273 S Calcineurin-like phosphoesterase
MDLDOOCB_00292 0.0 asnB 6.3.5.4 E Asparagine synthase
MDLDOOCB_00293 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
MDLDOOCB_00294 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
MDLDOOCB_00295 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
MDLDOOCB_00296 2.1e-103 S Iron-sulfur cluster assembly protein
MDLDOOCB_00297 1.5e-230 XK27_04775 S PAS domain
MDLDOOCB_00298 1.5e-209 yttB EGP Major facilitator Superfamily
MDLDOOCB_00299 0.0 pepO 3.4.24.71 O Peptidase family M13
MDLDOOCB_00300 0.0 kup P Transport of potassium into the cell
MDLDOOCB_00301 7.3e-74
MDLDOOCB_00302 1.6e-45 S PFAM Archaeal ATPase
MDLDOOCB_00304 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
MDLDOOCB_00305 5.9e-45
MDLDOOCB_00306 3e-112 L PFAM transposase IS116 IS110 IS902
MDLDOOCB_00308 5.5e-30
MDLDOOCB_00309 4.3e-40 S Protein of unknown function (DUF2922)
MDLDOOCB_00310 1.2e-132 S SLAP domain
MDLDOOCB_00312 5.3e-41
MDLDOOCB_00313 1.2e-77 K DNA-templated transcription, initiation
MDLDOOCB_00314 1.1e-25
MDLDOOCB_00315 4.3e-145 3.6.4.12 S PD-(D/E)XK nuclease family transposase
MDLDOOCB_00317 6.7e-19 3.6.4.12 S PD-(D/E)XK nuclease family transposase
MDLDOOCB_00318 2.2e-105 S SLAP domain
MDLDOOCB_00320 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
MDLDOOCB_00321 7.2e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
MDLDOOCB_00322 8.8e-177 yjbQ P TrkA C-terminal domain protein
MDLDOOCB_00323 1.9e-113 yjbQ P TrkA C-terminal domain protein
MDLDOOCB_00324 9.7e-107 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
MDLDOOCB_00325 7.8e-161 S Oxidoreductase family, NAD-binding Rossmann fold
MDLDOOCB_00326 1.7e-129
MDLDOOCB_00327 2.1e-116
MDLDOOCB_00328 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
MDLDOOCB_00329 1.4e-98 G Aldose 1-epimerase
MDLDOOCB_00330 1.8e-201 brpA K Cell envelope-like function transcriptional attenuator common domain protein
MDLDOOCB_00331 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
MDLDOOCB_00332 0.0 XK27_08315 M Sulfatase
MDLDOOCB_00333 1.8e-231 L COG3547 Transposase and inactivated derivatives
MDLDOOCB_00334 8.4e-265 S Fibronectin type III domain
MDLDOOCB_00335 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
MDLDOOCB_00336 3.4e-53
MDLDOOCB_00338 4.6e-257 pepC 3.4.22.40 E aminopeptidase
MDLDOOCB_00339 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
MDLDOOCB_00340 5e-301 oppA E ABC transporter, substratebinding protein
MDLDOOCB_00341 1.6e-310 oppA E ABC transporter, substratebinding protein
MDLDOOCB_00342 3e-270 L Transposase DDE domain
MDLDOOCB_00343 3.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
MDLDOOCB_00344 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
MDLDOOCB_00345 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
MDLDOOCB_00346 2.7e-199 oppD P Belongs to the ABC transporter superfamily
MDLDOOCB_00347 1.9e-175 oppF P Belongs to the ABC transporter superfamily
MDLDOOCB_00348 5.2e-256 pepC 3.4.22.40 E aminopeptidase
MDLDOOCB_00349 3.9e-72 hsp O Belongs to the small heat shock protein (HSP20) family
MDLDOOCB_00350 1.3e-28 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
MDLDOOCB_00351 9.9e-197 S Uncharacterised protein family (UPF0236)
MDLDOOCB_00352 6e-112
MDLDOOCB_00354 1.7e-110 E Belongs to the SOS response-associated peptidase family
MDLDOOCB_00355 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
MDLDOOCB_00356 4e-89 comEB 3.5.4.12 F MafB19-like deaminase
MDLDOOCB_00357 2e-103 S TPM domain
MDLDOOCB_00358 1.5e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
MDLDOOCB_00359 1e-307 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
MDLDOOCB_00360 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MDLDOOCB_00361 1e-147 tatD L hydrolase, TatD family
MDLDOOCB_00362 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MDLDOOCB_00363 6.7e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
MDLDOOCB_00364 4.5e-39 veg S Biofilm formation stimulator VEG
MDLDOOCB_00365 1.5e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
MDLDOOCB_00366 2.6e-173 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
MDLDOOCB_00367 7.6e-56
MDLDOOCB_00368 7.3e-290 S SLAP domain
MDLDOOCB_00369 6e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MDLDOOCB_00370 4.2e-172 2.7.1.2 GK ROK family
MDLDOOCB_00371 2.1e-42
MDLDOOCB_00372 3.6e-268 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
MDLDOOCB_00373 6.9e-69 S Domain of unknown function (DUF1934)
MDLDOOCB_00374 1.5e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
MDLDOOCB_00375 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
MDLDOOCB_00376 9.6e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MDLDOOCB_00377 1.8e-74 K acetyltransferase
MDLDOOCB_00378 5.7e-285 pipD E Dipeptidase
MDLDOOCB_00379 2.5e-152 msmR K AraC-like ligand binding domain
MDLDOOCB_00380 1.4e-226 pbuX F xanthine permease
MDLDOOCB_00381 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
MDLDOOCB_00382 2.4e-43 K Helix-turn-helix
MDLDOOCB_00383 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
MDLDOOCB_00385 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
MDLDOOCB_00386 8.7e-117 3.2.1.18 GH33 M Rib/alpha-like repeat
MDLDOOCB_00387 4.8e-124 3.2.1.18 GH33 M Rib/alpha-like repeat
MDLDOOCB_00389 7.8e-78 2.5.1.74 H UbiA prenyltransferase family
MDLDOOCB_00390 1e-95
MDLDOOCB_00391 1.4e-51
MDLDOOCB_00392 2.1e-42
MDLDOOCB_00393 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
MDLDOOCB_00394 9.5e-297 ybeC E amino acid
MDLDOOCB_00395 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
MDLDOOCB_00396 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
MDLDOOCB_00397 2.5e-39 rpmE2 J Ribosomal protein L31
MDLDOOCB_00398 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
MDLDOOCB_00399 4.8e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
MDLDOOCB_00400 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
MDLDOOCB_00401 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MDLDOOCB_00402 3.4e-129 S (CBS) domain
MDLDOOCB_00403 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
MDLDOOCB_00404 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
MDLDOOCB_00405 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
MDLDOOCB_00406 1.6e-33 yabO J S4 domain protein
MDLDOOCB_00407 6.8e-60 divIC D Septum formation initiator
MDLDOOCB_00408 1.8e-62 yabR J S1 RNA binding domain
MDLDOOCB_00409 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
MDLDOOCB_00410 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MDLDOOCB_00411 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
MDLDOOCB_00412 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MDLDOOCB_00413 1.7e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
MDLDOOCB_00414 1.4e-83 K FR47-like protein
MDLDOOCB_00415 1.6e-08
MDLDOOCB_00416 1.6e-08
MDLDOOCB_00417 1.6e-08
MDLDOOCB_00419 1.3e-81 yebR 1.8.4.14 T GAF domain-containing protein
MDLDOOCB_00420 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
MDLDOOCB_00421 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MDLDOOCB_00422 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MDLDOOCB_00423 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
MDLDOOCB_00424 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
MDLDOOCB_00425 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
MDLDOOCB_00426 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
MDLDOOCB_00427 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
MDLDOOCB_00428 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
MDLDOOCB_00429 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
MDLDOOCB_00430 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
MDLDOOCB_00431 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
MDLDOOCB_00432 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
MDLDOOCB_00433 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
MDLDOOCB_00434 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
MDLDOOCB_00435 3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
MDLDOOCB_00436 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
MDLDOOCB_00437 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
MDLDOOCB_00438 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
MDLDOOCB_00439 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
MDLDOOCB_00440 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
MDLDOOCB_00441 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MDLDOOCB_00442 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
MDLDOOCB_00443 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
MDLDOOCB_00444 1.1e-54 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
MDLDOOCB_00445 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
MDLDOOCB_00446 2.3e-24 rpmD J Ribosomal protein L30
MDLDOOCB_00447 2.6e-71 rplO J Binds to the 23S rRNA
MDLDOOCB_00448 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
MDLDOOCB_00449 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
MDLDOOCB_00450 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
MDLDOOCB_00451 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
MDLDOOCB_00452 3.6e-55 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
MDLDOOCB_00453 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
MDLDOOCB_00454 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MDLDOOCB_00455 1.4e-60 rplQ J Ribosomal protein L17
MDLDOOCB_00456 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
MDLDOOCB_00457 4.6e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
MDLDOOCB_00458 7.2e-136 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
MDLDOOCB_00459 8.4e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
MDLDOOCB_00460 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
MDLDOOCB_00461 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
MDLDOOCB_00462 3.6e-183 L Phage integrase family
MDLDOOCB_00463 1e-92 L Transposase
MDLDOOCB_00464 2.2e-226 L Transposase
MDLDOOCB_00465 3.4e-164 msmX P Belongs to the ABC transporter superfamily
MDLDOOCB_00466 2.2e-22
MDLDOOCB_00467 3.3e-140 repB EP Plasmid replication protein
MDLDOOCB_00468 2e-79 S helix_turn_helix, Deoxyribose operon repressor
MDLDOOCB_00469 3.8e-196 S Uncharacterised protein family (UPF0236)
MDLDOOCB_00470 8.1e-175 ulaG S Beta-lactamase superfamily domain
MDLDOOCB_00471 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
MDLDOOCB_00472 1.3e-231 ulaA S PTS system sugar-specific permease component
MDLDOOCB_00473 4.1e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
MDLDOOCB_00474 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
MDLDOOCB_00475 7.2e-129 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
MDLDOOCB_00476 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
MDLDOOCB_00477 5.2e-68 L haloacid dehalogenase-like hydrolase
MDLDOOCB_00478 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
MDLDOOCB_00479 1.4e-16 L Transposase
MDLDOOCB_00480 1.9e-12 L Transposase
MDLDOOCB_00481 5.9e-13 K Acetyltransferase (GNAT) domain
MDLDOOCB_00482 5.8e-100 L Helix-turn-helix domain
MDLDOOCB_00483 3.8e-160 L hmm pf00665
MDLDOOCB_00484 1.2e-10
MDLDOOCB_00485 2.8e-65 K LytTr DNA-binding domain
MDLDOOCB_00486 6e-49 S Protein of unknown function (DUF3021)
MDLDOOCB_00487 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
MDLDOOCB_00488 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
MDLDOOCB_00489 6e-132 S membrane transporter protein
MDLDOOCB_00490 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
MDLDOOCB_00491 7.3e-161 czcD P cation diffusion facilitator family transporter
MDLDOOCB_00492 1.4e-23
MDLDOOCB_00493 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
MDLDOOCB_00494 5.4e-183 S AAA domain
MDLDOOCB_00495 3.3e-44
MDLDOOCB_00496 4.3e-266 pepC 3.4.22.40 E Peptidase C1-like family
MDLDOOCB_00497 2.7e-51
MDLDOOCB_00498 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
MDLDOOCB_00499 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
MDLDOOCB_00500 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MDLDOOCB_00501 3.4e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
MDLDOOCB_00502 6.7e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
MDLDOOCB_00503 6.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MDLDOOCB_00504 4.2e-95 sigH K Belongs to the sigma-70 factor family
MDLDOOCB_00505 1.7e-34
MDLDOOCB_00506 8.4e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
MDLDOOCB_00507 2.1e-70 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
MDLDOOCB_00508 1.6e-246 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
MDLDOOCB_00509 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
MDLDOOCB_00510 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
MDLDOOCB_00511 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
MDLDOOCB_00512 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
MDLDOOCB_00513 2.8e-157 pstS P Phosphate
MDLDOOCB_00514 4.3e-162 pstC P probably responsible for the translocation of the substrate across the membrane
MDLDOOCB_00515 1e-154 pstA P Phosphate transport system permease protein PstA
MDLDOOCB_00516 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
MDLDOOCB_00517 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
MDLDOOCB_00518 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
MDLDOOCB_00519 2.8e-90 L An automated process has identified a potential problem with this gene model
MDLDOOCB_00520 1.5e-11 GT2,GT4 M family 8
MDLDOOCB_00521 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
MDLDOOCB_00522 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
MDLDOOCB_00523 1.5e-139 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
MDLDOOCB_00524 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
MDLDOOCB_00525 9e-26
MDLDOOCB_00526 1.4e-81 L COG3385 FOG Transposase and inactivated derivatives
MDLDOOCB_00527 2.8e-85 L PFAM Transposase DDE domain
MDLDOOCB_00528 5.7e-109 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00530 3.6e-183 L DDE superfamily endonuclease
MDLDOOCB_00531 3.2e-11
MDLDOOCB_00532 4.3e-59 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
MDLDOOCB_00533 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
MDLDOOCB_00534 1.1e-127 K UTRA domain
MDLDOOCB_00535 6.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
MDLDOOCB_00536 6.4e-90 alkD L DNA alkylation repair enzyme
MDLDOOCB_00537 1.8e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
MDLDOOCB_00538 3.9e-82
MDLDOOCB_00539 1.8e-38 C FMN_bind
MDLDOOCB_00540 4.6e-299 I Protein of unknown function (DUF2974)
MDLDOOCB_00541 3.3e-303 L Transposase
MDLDOOCB_00542 4.7e-194 pbpX1 V Beta-lactamase
MDLDOOCB_00543 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
MDLDOOCB_00544 5.5e-217 aspC 2.6.1.1 E Aminotransferase
MDLDOOCB_00545 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
MDLDOOCB_00546 3.7e-176 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MDLDOOCB_00547 1.4e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
MDLDOOCB_00548 1.1e-74 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
MDLDOOCB_00549 1.1e-247 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
MDLDOOCB_00550 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
MDLDOOCB_00551 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
MDLDOOCB_00552 2.4e-122 yjeM E Amino Acid
MDLDOOCB_00553 7e-40 yjeM E Amino acid permease
MDLDOOCB_00554 2.5e-37 yjeM E Amino Acid
MDLDOOCB_00555 3.7e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
MDLDOOCB_00556 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
MDLDOOCB_00557 1.2e-215 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
MDLDOOCB_00558 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
MDLDOOCB_00559 8.3e-151
MDLDOOCB_00560 1.7e-174 L COG3385 FOG Transposase and inactivated derivatives
MDLDOOCB_00561 1.3e-84 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
MDLDOOCB_00562 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MDLDOOCB_00563 5.7e-106 2.4.1.58 GT8 M family 8
MDLDOOCB_00564 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
MDLDOOCB_00565 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
MDLDOOCB_00566 2.4e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
MDLDOOCB_00567 1.1e-34 S Protein of unknown function (DUF2508)
MDLDOOCB_00568 7.6e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
MDLDOOCB_00569 2.2e-51 yaaQ S Cyclic-di-AMP receptor
MDLDOOCB_00570 3.7e-154 holB 2.7.7.7 L DNA polymerase III
MDLDOOCB_00571 1.8e-59 yabA L Involved in initiation control of chromosome replication
MDLDOOCB_00572 1.5e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
MDLDOOCB_00573 8.4e-131 fat 3.1.2.21 I Acyl-ACP thioesterase
MDLDOOCB_00574 2.2e-85 S ECF transporter, substrate-specific component
MDLDOOCB_00575 8.2e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
MDLDOOCB_00576 4.8e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
MDLDOOCB_00577 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
MDLDOOCB_00578 3.7e-51 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
MDLDOOCB_00579 3.2e-170 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
MDLDOOCB_00580 8.1e-286 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
MDLDOOCB_00581 0.0 uup S ABC transporter, ATP-binding protein
MDLDOOCB_00582 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
MDLDOOCB_00583 6.1e-227 L COG3547 Transposase and inactivated derivatives
MDLDOOCB_00584 2.6e-25 S Uncharacterised protein family (UPF0236)
MDLDOOCB_00586 1.9e-245 L Transposase IS66 family
MDLDOOCB_00587 8.7e-34 S Transposase C of IS166 homeodomain
MDLDOOCB_00588 9.3e-64 L PFAM IS66 Orf2 family protein
MDLDOOCB_00589 7.7e-22
MDLDOOCB_00590 2.1e-64 fhaB M Rib/alpha-like repeat
MDLDOOCB_00591 7.4e-150 fhaB M Rib/alpha-like repeat
MDLDOOCB_00592 6.1e-227 L COG3547 Transposase and inactivated derivatives
MDLDOOCB_00593 1.1e-183 scrR K helix_turn _helix lactose operon repressor
MDLDOOCB_00594 3.7e-295 scrB 3.2.1.26 GH32 G invertase
MDLDOOCB_00595 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
MDLDOOCB_00596 2.3e-181 M CHAP domain
MDLDOOCB_00597 3.5e-75
MDLDOOCB_00598 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
MDLDOOCB_00599 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
MDLDOOCB_00600 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
MDLDOOCB_00601 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
MDLDOOCB_00602 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
MDLDOOCB_00603 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
MDLDOOCB_00604 9.6e-41 yajC U Preprotein translocase
MDLDOOCB_00605 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MDLDOOCB_00606 5.9e-216 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MDLDOOCB_00607 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
MDLDOOCB_00608 4.7e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
MDLDOOCB_00609 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
MDLDOOCB_00610 2e-42 yrzL S Belongs to the UPF0297 family
MDLDOOCB_00611 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
MDLDOOCB_00612 1.1e-50 yrzB S Belongs to the UPF0473 family
MDLDOOCB_00613 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
MDLDOOCB_00614 3.5e-54 trxA O Belongs to the thioredoxin family
MDLDOOCB_00615 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
MDLDOOCB_00616 2e-139 L An automated process has identified a potential problem with this gene model
MDLDOOCB_00617 1.1e-71 yslB S Protein of unknown function (DUF2507)
MDLDOOCB_00618 7.3e-144 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
MDLDOOCB_00619 6.2e-111 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
MDLDOOCB_00620 4.4e-40 ropB K Helix-turn-helix domain
MDLDOOCB_00622 1.6e-227 L Transposase
MDLDOOCB_00624 8.7e-19 spaC2 V Lanthionine synthetase C-like protein
MDLDOOCB_00625 3.4e-99
MDLDOOCB_00626 1.4e-133
MDLDOOCB_00627 3.1e-100 V ATPases associated with a variety of cellular activities
MDLDOOCB_00628 1.3e-146 ykuT M mechanosensitive ion channel
MDLDOOCB_00629 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
MDLDOOCB_00630 1.3e-36
MDLDOOCB_00631 3.8e-160 L hmm pf00665
MDLDOOCB_00632 5.8e-100 L Helix-turn-helix domain
MDLDOOCB_00633 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
MDLDOOCB_00634 3.2e-181 ccpA K catabolite control protein A
MDLDOOCB_00635 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
MDLDOOCB_00636 4.3e-55
MDLDOOCB_00637 9.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
MDLDOOCB_00638 1.7e-105 yutD S Protein of unknown function (DUF1027)
MDLDOOCB_00639 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
MDLDOOCB_00640 3.7e-100 S Protein of unknown function (DUF1461)
MDLDOOCB_00641 2.6e-115 dedA S SNARE-like domain protein
MDLDOOCB_00642 8e-185 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
MDLDOOCB_00643 1.8e-79
MDLDOOCB_00673 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
MDLDOOCB_00674 7.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
MDLDOOCB_00675 1.4e-176 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
MDLDOOCB_00676 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
MDLDOOCB_00677 1.7e-29 secG U Preprotein translocase
MDLDOOCB_00678 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
MDLDOOCB_00679 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
MDLDOOCB_00680 1.8e-79
MDLDOOCB_00701 8.7e-218 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
MDLDOOCB_00702 2.4e-246 qacA EGP Major facilitator Superfamily
MDLDOOCB_00703 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
MDLDOOCB_00704 3.1e-151 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
MDLDOOCB_00705 1.4e-183 yfeW 3.4.16.4 V Beta-lactamase
MDLDOOCB_00706 3.1e-187 S Bacterial protein of unknown function (DUF871)
MDLDOOCB_00707 4.5e-144 ybbH_2 K rpiR family
MDLDOOCB_00708 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
MDLDOOCB_00709 1.4e-173 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
MDLDOOCB_00710 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
MDLDOOCB_00711 2.4e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
MDLDOOCB_00712 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
MDLDOOCB_00713 6.1e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
MDLDOOCB_00714 3e-162 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
MDLDOOCB_00715 1.1e-231 ndh 1.6.99.3 C NADH dehydrogenase
MDLDOOCB_00716 1.4e-42 1.3.5.4 C FAD binding domain
MDLDOOCB_00718 4.4e-84 3.6.4.12 S PD-(D/E)XK nuclease family transposase
MDLDOOCB_00720 1.3e-168 K LysR substrate binding domain
MDLDOOCB_00721 3.8e-122 3.6.1.27 I Acid phosphatase homologues
MDLDOOCB_00722 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
MDLDOOCB_00723 2.4e-274 ytgP S Polysaccharide biosynthesis protein
MDLDOOCB_00724 9e-207 L Transposase DDE domain
MDLDOOCB_00725 1.8e-205 UW LPXTG-motif cell wall anchor domain protein
MDLDOOCB_00728 8e-108 S domain, Protein
MDLDOOCB_00729 1.8e-45 pspC KT PspC domain
MDLDOOCB_00731 3.6e-233 dacA 3.4.16.4 M Belongs to the peptidase S11 family
MDLDOOCB_00732 8.1e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
MDLDOOCB_00733 1e-98 M ErfK YbiS YcfS YnhG
MDLDOOCB_00734 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
MDLDOOCB_00735 6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
MDLDOOCB_00736 3e-90 S PFAM Archaeal ATPase
MDLDOOCB_00737 5.1e-91 S PFAM Archaeal ATPase
MDLDOOCB_00738 7.7e-26
MDLDOOCB_00739 4.3e-76 menA 2.5.1.74 H UbiA prenyltransferase family
MDLDOOCB_00740 1.3e-221 L Transposase
MDLDOOCB_00741 1.9e-75 M LysM domain
MDLDOOCB_00742 4.5e-43
MDLDOOCB_00744 3.5e-29
MDLDOOCB_00745 2.9e-73 yniG EGP Major facilitator Superfamily
MDLDOOCB_00746 9.2e-237 L transposase, IS605 OrfB family
MDLDOOCB_00747 4.7e-92 yniG EGP Major facilitator Superfamily
MDLDOOCB_00748 2.7e-155 L Transposase
MDLDOOCB_00749 5e-177 S cog cog1373
MDLDOOCB_00750 5.6e-179 S PFAM Archaeal ATPase
MDLDOOCB_00751 1.2e-192 I transferase activity, transferring acyl groups other than amino-acyl groups
MDLDOOCB_00752 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
MDLDOOCB_00753 1.6e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
MDLDOOCB_00754 2.9e-78 G Phosphoglycerate mutase family
MDLDOOCB_00755 8.9e-10 G Phosphoglycerate mutase family
MDLDOOCB_00756 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
MDLDOOCB_00757 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
MDLDOOCB_00758 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
MDLDOOCB_00759 7.2e-56 yheA S Belongs to the UPF0342 family
MDLDOOCB_00760 1.5e-230 yhaO L Ser Thr phosphatase family protein
MDLDOOCB_00761 0.0 L AAA domain
MDLDOOCB_00762 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
MDLDOOCB_00764 2.3e-17
MDLDOOCB_00765 2.4e-51 S Domain of unknown function DUF1829
MDLDOOCB_00766 2.6e-264
MDLDOOCB_00767 1.5e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
MDLDOOCB_00768 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
MDLDOOCB_00769 3.9e-25
MDLDOOCB_00770 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
MDLDOOCB_00771 1.7e-134 ecsA V ABC transporter, ATP-binding protein
MDLDOOCB_00772 2.9e-221 ecsB U ABC transporter
MDLDOOCB_00773 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
MDLDOOCB_00774 1.1e-163 L An automated process has identified a potential problem with this gene model
MDLDOOCB_00775 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
MDLDOOCB_00776 6.9e-121 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
MDLDOOCB_00777 3.7e-185
MDLDOOCB_00778 6.1e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
MDLDOOCB_00779 1.5e-234 mepA V MATE efflux family protein
MDLDOOCB_00780 8.4e-171 S SLAP domain
MDLDOOCB_00781 7.4e-74 L Putative transposase DNA-binding domain
MDLDOOCB_00782 1.7e-84 L Putative transposase DNA-binding domain
MDLDOOCB_00783 1.4e-83 L Resolvase, N-terminal
MDLDOOCB_00784 1.2e-157 M Peptidase family M1 domain
MDLDOOCB_00785 2.7e-193 S Bacteriocin helveticin-J
MDLDOOCB_00786 1.6e-18
MDLDOOCB_00787 2.4e-50 L RelB antitoxin
MDLDOOCB_00788 9.1e-140 qmcA O prohibitin homologues
MDLDOOCB_00789 1.9e-199 purD 6.3.4.13 F Belongs to the GARS family
MDLDOOCB_00790 9.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
MDLDOOCB_00791 3.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
MDLDOOCB_00792 2.6e-35 yaaA S S4 domain protein YaaA
MDLDOOCB_00793 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
MDLDOOCB_00794 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MDLDOOCB_00795 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MDLDOOCB_00796 1.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
MDLDOOCB_00797 2.7e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
MDLDOOCB_00798 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
MDLDOOCB_00799 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
MDLDOOCB_00800 5.7e-69 rplI J Binds to the 23S rRNA
MDLDOOCB_00801 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
MDLDOOCB_00802 2.3e-165 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
MDLDOOCB_00803 5.2e-170 degV S DegV family
MDLDOOCB_00804 2.5e-135 V ABC transporter transmembrane region
MDLDOOCB_00805 6.7e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
MDLDOOCB_00807 1.4e-16
MDLDOOCB_00808 1.6e-227 I Protein of unknown function (DUF2974)
MDLDOOCB_00809 9.2e-119 yhiD S MgtC family
MDLDOOCB_00811 3.8e-30
MDLDOOCB_00812 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MDLDOOCB_00813 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
MDLDOOCB_00814 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MDLDOOCB_00815 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
MDLDOOCB_00816 8.6e-251 dnaB L Replication initiation and membrane attachment
MDLDOOCB_00817 1.3e-168 dnaI L Primosomal protein DnaI
MDLDOOCB_00818 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MDLDOOCB_00819 1.2e-74
MDLDOOCB_00820 1.3e-221 L Transposase
MDLDOOCB_00821 1.3e-141 yfeO P Voltage gated chloride channel
MDLDOOCB_00822 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
MDLDOOCB_00823 3.8e-30
MDLDOOCB_00824 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MDLDOOCB_00825 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
MDLDOOCB_00826 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MDLDOOCB_00827 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
MDLDOOCB_00828 8.6e-251 dnaB L Replication initiation and membrane attachment
MDLDOOCB_00829 1.3e-168 dnaI L Primosomal protein DnaI
MDLDOOCB_00830 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MDLDOOCB_00831 1.3e-74
MDLDOOCB_00832 8.1e-43 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00833 7.4e-135 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00834 1.5e-180 S Domain of unknown function (DUF389)
MDLDOOCB_00835 6.4e-99 L Transposase
MDLDOOCB_00836 3e-107 L Transposase
MDLDOOCB_00839 4.2e-53 K LytTr DNA-binding domain
MDLDOOCB_00840 7.7e-39 S Protein of unknown function (DUF3021)
MDLDOOCB_00841 1.7e-168 V ABC transporter
MDLDOOCB_00842 3.9e-23 S domain protein
MDLDOOCB_00843 3.8e-196 S Uncharacterised protein family (UPF0236)
MDLDOOCB_00844 5.8e-73 S domain protein
MDLDOOCB_00846 4.9e-251 ade 3.5.4.2 F Adenine deaminase C-terminal domain
MDLDOOCB_00847 3e-145 potD2 P ABC transporter
MDLDOOCB_00848 1.6e-135 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
MDLDOOCB_00849 3.7e-84 potC3 E Binding-protein-dependent transport system inner membrane component
MDLDOOCB_00850 1.6e-227 L Transposase
MDLDOOCB_00851 3.7e-101 potB E Binding-protein-dependent transport system inner membrane component
MDLDOOCB_00852 9e-98 rihB 3.2.2.1 F Nucleoside
MDLDOOCB_00853 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
MDLDOOCB_00854 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
MDLDOOCB_00855 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
MDLDOOCB_00856 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
MDLDOOCB_00857 8.6e-199 tnpB L Putative transposase DNA-binding domain
MDLDOOCB_00858 4.2e-84 yqeG S HAD phosphatase, family IIIA
MDLDOOCB_00859 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
MDLDOOCB_00860 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
MDLDOOCB_00861 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
MDLDOOCB_00862 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
MDLDOOCB_00863 4.6e-216 ylbM S Belongs to the UPF0348 family
MDLDOOCB_00864 4.7e-97 yceD S Uncharacterized ACR, COG1399
MDLDOOCB_00865 1.2e-126 K response regulator
MDLDOOCB_00866 1.3e-277 arlS 2.7.13.3 T Histidine kinase
MDLDOOCB_00867 5.8e-13 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00868 2.2e-14 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00869 1.1e-67 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_00870 1e-12
MDLDOOCB_00871 9.2e-100 S CAAX protease self-immunity
MDLDOOCB_00872 6.1e-224 S SLAP domain
MDLDOOCB_00873 1.3e-82 S Aminoacyl-tRNA editing domain
MDLDOOCB_00874 2.2e-163 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
MDLDOOCB_00875 2.4e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
MDLDOOCB_00876 7.7e-135 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MDLDOOCB_00877 4.5e-58 yodB K Transcriptional regulator, HxlR family
MDLDOOCB_00879 2.7e-107 papP P ABC transporter, permease protein
MDLDOOCB_00880 5.3e-116 P ABC transporter permease
MDLDOOCB_00881 3.3e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
MDLDOOCB_00882 6.2e-157 cjaA ET ABC transporter substrate-binding protein
MDLDOOCB_00883 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
MDLDOOCB_00884 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
MDLDOOCB_00885 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
MDLDOOCB_00886 3.7e-168 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
MDLDOOCB_00887 3.8e-136 metQ1 P Belongs to the nlpA lipoprotein family
MDLDOOCB_00888 1.9e-25
MDLDOOCB_00889 0.0 mco Q Multicopper oxidase
MDLDOOCB_00890 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
MDLDOOCB_00891 2.5e-30 oppA E ABC transporter
MDLDOOCB_00892 4e-267 oppA E ABC transporter
MDLDOOCB_00893 1.1e-231 Q Imidazolonepropionase and related amidohydrolases
MDLDOOCB_00894 1.4e-245 3.5.1.47 S Peptidase dimerisation domain
MDLDOOCB_00895 3e-137 S Protein of unknown function (DUF3100)
MDLDOOCB_00896 5.7e-46 S An automated process has identified a potential problem with this gene model
MDLDOOCB_00897 2.9e-53 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
MDLDOOCB_00898 1.1e-112 S SLAP domain
MDLDOOCB_00899 1.6e-227 L Transposase
MDLDOOCB_00900 2.2e-89
MDLDOOCB_00901 3e-09 isdH M Iron Transport-associated domain
MDLDOOCB_00902 6.3e-123 M Iron Transport-associated domain
MDLDOOCB_00903 8.7e-159 isdE P Periplasmic binding protein
MDLDOOCB_00904 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MDLDOOCB_00905 2e-138 fhuC 3.6.3.34 HP abc transporter atp-binding protein
MDLDOOCB_00906 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
MDLDOOCB_00907 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
MDLDOOCB_00908 1.3e-38 S RelB antitoxin
MDLDOOCB_00909 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
MDLDOOCB_00910 0.0 S membrane
MDLDOOCB_00911 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
MDLDOOCB_00912 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
MDLDOOCB_00913 2.4e-104 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MDLDOOCB_00914 4e-119 gluP 3.4.21.105 S Rhomboid family
MDLDOOCB_00915 4.8e-35 yqgQ S Bacterial protein of unknown function (DUF910)
MDLDOOCB_00916 1.5e-65 yqhL P Rhodanese-like protein
MDLDOOCB_00917 1.5e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
MDLDOOCB_00918 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
MDLDOOCB_00919 2e-263 glnA 6.3.1.2 E glutamine synthetase
MDLDOOCB_00920 1.9e-169
MDLDOOCB_00921 1.7e-147
MDLDOOCB_00922 1.9e-21
MDLDOOCB_00925 2.7e-34
MDLDOOCB_00926 4.5e-131 S interspecies interaction between organisms
MDLDOOCB_00928 9.1e-10 K peptidyl-tyrosine sulfation
MDLDOOCB_00929 7.1e-263 E ABC transporter, substratebinding protein
MDLDOOCB_00930 3.7e-66 K Helix-turn-helix domain, rpiR family
MDLDOOCB_00931 2.9e-122 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
MDLDOOCB_00932 8.4e-90 nanK GK ROK family
MDLDOOCB_00933 2.3e-56 G Xylose isomerase domain protein TIM barrel
MDLDOOCB_00934 1.9e-121 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
MDLDOOCB_00935 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MDLDOOCB_00936 1.1e-59 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
MDLDOOCB_00937 1.7e-36 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
MDLDOOCB_00938 2.9e-109 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
MDLDOOCB_00939 7.7e-10 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
MDLDOOCB_00940 3.6e-88 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
MDLDOOCB_00941 3.6e-224 L Transposase
MDLDOOCB_00942 5.1e-106 fabK 1.3.1.9 S Nitronate monooxygenase
MDLDOOCB_00943 1.6e-82 2.8.3.1 I Coenzyme A transferase
MDLDOOCB_00944 1.1e-149 2.8.3.1 I Coenzyme A transferase
MDLDOOCB_00945 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
MDLDOOCB_00946 1.5e-54 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
MDLDOOCB_00947 3.2e-75 S ECF transporter, substrate-specific component
MDLDOOCB_00949 9.3e-74 coaA 2.7.1.33 F Pantothenic acid kinase
MDLDOOCB_00950 2e-139 L An automated process has identified a potential problem with this gene model
MDLDOOCB_00951 2.2e-54 oppA E ABC transporter substrate-binding protein
MDLDOOCB_00952 1.3e-149 oppA E ABC transporter substrate-binding protein
MDLDOOCB_00953 8.4e-161 L PFAM transposase, IS4 family protein
MDLDOOCB_00954 5.2e-104
MDLDOOCB_00956 5.7e-233 L COG3547 Transposase and inactivated derivatives
MDLDOOCB_00957 1.2e-28 L COG2963 Transposase and inactivated derivatives
MDLDOOCB_00958 4e-60 L Resolvase, N terminal domain
MDLDOOCB_00959 4.6e-25 dnaQ 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
MDLDOOCB_00960 3.8e-104 L An automated process has identified a potential problem with this gene model
MDLDOOCB_00961 2.1e-132 infB M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
MDLDOOCB_00962 7.6e-143 L Transposase
MDLDOOCB_00963 5.8e-156 L COG2963 Transposase and inactivated derivatives
MDLDOOCB_00964 2.8e-188 K Periplasmic binding protein-like domain
MDLDOOCB_00965 2e-106 K Transcriptional regulator, AbiEi antitoxin
MDLDOOCB_00966 6.4e-162 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
MDLDOOCB_00967 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
MDLDOOCB_00968 2.1e-142 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
MDLDOOCB_00969 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
MDLDOOCB_00970 3.2e-165 lacR K Transcriptional regulator
MDLDOOCB_00971 4.1e-67 lacS G Transporter
MDLDOOCB_00972 3.6e-237 lacS G Transporter
MDLDOOCB_00973 0.0 lacZ 3.2.1.23 G -beta-galactosidase
MDLDOOCB_00974 2.1e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
MDLDOOCB_00975 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
MDLDOOCB_00976 1.3e-221 L Transposase
MDLDOOCB_00977 1.2e-74
MDLDOOCB_00978 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MDLDOOCB_00979 1.3e-168 dnaI L Primosomal protein DnaI
MDLDOOCB_00980 8.6e-251 dnaB L Replication initiation and membrane attachment
MDLDOOCB_00981 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
MDLDOOCB_00982 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MDLDOOCB_00983 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
MDLDOOCB_00984 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MDLDOOCB_00985 3.8e-30
MDLDOOCB_00986 2.2e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
MDLDOOCB_00987 5.5e-36
MDLDOOCB_00988 1.6e-158 scrR K Periplasmic binding protein domain
MDLDOOCB_00989 2.3e-237 msmE G Bacterial extracellular solute-binding protein
MDLDOOCB_00990 4.8e-157 msmF P Binding-protein-dependent transport system inner membrane component
MDLDOOCB_00991 2e-152 msmG P Binding-protein-dependent transport system inner membrane component
MDLDOOCB_00992 1.4e-209 msmX P Belongs to the ABC transporter superfamily
MDLDOOCB_00993 0.0 rafA 3.2.1.22 G alpha-galactosidase
MDLDOOCB_00994 6.2e-271 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
MDLDOOCB_00995 2.2e-19 S CAAX protease self-immunity
MDLDOOCB_00996 1.4e-22 S CAAX protease self-immunity
MDLDOOCB_00997 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_00999 1.6e-96 ybaT E Amino acid permease
MDLDOOCB_01000 6.5e-07 S LPXTG cell wall anchor motif
MDLDOOCB_01001 2.6e-146 S Putative ABC-transporter type IV
MDLDOOCB_01003 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
MDLDOOCB_01004 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
MDLDOOCB_01005 5.2e-117 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
MDLDOOCB_01006 1.2e-210 oppA E ABC transporter substrate-binding protein
MDLDOOCB_01007 2.7e-109 oppA E ABC transporter substrate-binding protein
MDLDOOCB_01008 6.4e-177 K AI-2E family transporter
MDLDOOCB_01009 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
MDLDOOCB_01010 4.1e-18
MDLDOOCB_01011 5.2e-248 G Major Facilitator
MDLDOOCB_01012 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
MDLDOOCB_01013 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
MDLDOOCB_01014 1.7e-174 ABC-SBP S ABC transporter
MDLDOOCB_01015 1.3e-221 L Transposase
MDLDOOCB_01016 1.8e-151 psaA P Belongs to the bacterial solute-binding protein 9 family
MDLDOOCB_01018 7.5e-109 2.7.6.5 T Region found in RelA / SpoT proteins
MDLDOOCB_01019 6e-27 K response regulator
MDLDOOCB_01020 1.3e-65 K response regulator
MDLDOOCB_01021 2.5e-215 sptS 2.7.13.3 T Histidine kinase
MDLDOOCB_01022 6.7e-207 EGP Major facilitator Superfamily
MDLDOOCB_01023 5.6e-68 O OsmC-like protein
MDLDOOCB_01024 2.3e-87 S Protein of unknown function (DUF805)
MDLDOOCB_01025 3.2e-77
MDLDOOCB_01026 3.1e-93
MDLDOOCB_01027 9.9e-180
MDLDOOCB_01028 5.8e-83 S Fic/DOC family
MDLDOOCB_01029 3.3e-275 yjeM E Amino Acid
MDLDOOCB_01030 1.2e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MDLDOOCB_01031 1.4e-226 L Transposase
MDLDOOCB_01032 1e-116 sdaAB 4.3.1.17 E Serine dehydratase beta chain
MDLDOOCB_01033 1.6e-227 L Transposase
MDLDOOCB_01034 2.4e-44
MDLDOOCB_01035 1.3e-284 lsa S ABC transporter
MDLDOOCB_01036 1.6e-227 L Transposase
MDLDOOCB_01037 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
MDLDOOCB_01038 2e-37 scrR K Periplasmic binding protein domain
MDLDOOCB_01039 2.8e-33 scrR K Periplasmic binding protein domain
MDLDOOCB_01040 1.9e-135 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_01041 8.1e-43 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_01042 1.3e-30
MDLDOOCB_01043 8e-69 T Toxin-antitoxin system, toxin component, MazF family
MDLDOOCB_01044 2.2e-102 L Integrase
MDLDOOCB_01045 3.3e-153 L Transposase
MDLDOOCB_01046 1.2e-57 L Transposase
MDLDOOCB_01047 2.5e-115 L PFAM Integrase catalytic
MDLDOOCB_01048 8.6e-119 clcA P chloride
MDLDOOCB_01049 1.6e-60 clcA P chloride
MDLDOOCB_01050 4.7e-26 K FCD
MDLDOOCB_01051 3.4e-15 K FCD
MDLDOOCB_01052 1.5e-102 GM NmrA-like family
MDLDOOCB_01053 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
MDLDOOCB_01054 3.5e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
MDLDOOCB_01055 2.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
MDLDOOCB_01056 4.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
MDLDOOCB_01057 3.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
MDLDOOCB_01058 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
MDLDOOCB_01059 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
MDLDOOCB_01060 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
MDLDOOCB_01061 2.7e-82 lctP C L-lactate permease
MDLDOOCB_01062 1.1e-163 L An automated process has identified a potential problem with this gene model
MDLDOOCB_01063 6.8e-148 glcU U sugar transport
MDLDOOCB_01064 2.2e-39
MDLDOOCB_01065 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
MDLDOOCB_01066 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
MDLDOOCB_01067 1.1e-36 S Alpha beta hydrolase
MDLDOOCB_01068 2.3e-65 S Alpha beta hydrolase
MDLDOOCB_01069 1.9e-37
MDLDOOCB_01070 2.6e-52
MDLDOOCB_01071 4e-113 S haloacid dehalogenase-like hydrolase
MDLDOOCB_01072 2e-291 V ABC-type multidrug transport system, ATPase and permease components
MDLDOOCB_01073 4.1e-276 V ABC-type multidrug transport system, ATPase and permease components
MDLDOOCB_01074 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
MDLDOOCB_01075 2.9e-178 I Carboxylesterase family
MDLDOOCB_01077 1.7e-205 M Glycosyl hydrolases family 25
MDLDOOCB_01078 1.3e-157 cinI S Serine hydrolase (FSH1)
MDLDOOCB_01079 2.7e-300 S Predicted membrane protein (DUF2207)
MDLDOOCB_01080 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
MDLDOOCB_01083 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
MDLDOOCB_01084 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
MDLDOOCB_01085 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
MDLDOOCB_01086 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
MDLDOOCB_01087 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
MDLDOOCB_01088 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
MDLDOOCB_01089 3.4e-71 yqhY S Asp23 family, cell envelope-related function
MDLDOOCB_01090 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MDLDOOCB_01091 2.2e-143 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
MDLDOOCB_01092 7.6e-186 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
MDLDOOCB_01093 1.1e-34 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
MDLDOOCB_01094 2.4e-153 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
MDLDOOCB_01095 2.2e-148 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
MDLDOOCB_01096 3.7e-291 recN L May be involved in recombinational repair of damaged DNA
MDLDOOCB_01097 1.1e-77 6.3.3.2 S ASCH
MDLDOOCB_01098 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
MDLDOOCB_01099 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
MDLDOOCB_01100 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MDLDOOCB_01101 1.9e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
MDLDOOCB_01102 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
MDLDOOCB_01103 1.1e-138 stp 3.1.3.16 T phosphatase
MDLDOOCB_01104 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
MDLDOOCB_01105 4.1e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
MDLDOOCB_01106 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
MDLDOOCB_01107 2.4e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
MDLDOOCB_01108 1.1e-30
MDLDOOCB_01109 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
MDLDOOCB_01110 4e-57 asp S Asp23 family, cell envelope-related function
MDLDOOCB_01111 9.9e-305 yloV S DAK2 domain fusion protein YloV
MDLDOOCB_01112 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
MDLDOOCB_01113 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
MDLDOOCB_01114 1.8e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
MDLDOOCB_01115 9.6e-194 oppD P Belongs to the ABC transporter superfamily
MDLDOOCB_01116 1.3e-171 oppF P Belongs to the ABC transporter superfamily
MDLDOOCB_01117 5.7e-172 oppB P ABC transporter permease
MDLDOOCB_01118 3.4e-129 oppC P Binding-protein-dependent transport system inner membrane component
MDLDOOCB_01119 7.4e-120 oppA E ABC transporter substrate-binding protein
MDLDOOCB_01120 1.8e-116 oppA E ABC transporter substrate-binding protein
MDLDOOCB_01121 2.4e-15 oppA E ABC transporter substrate-binding protein
MDLDOOCB_01122 3e-307 oppA E ABC transporter substrate-binding protein
MDLDOOCB_01123 5.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
MDLDOOCB_01124 0.0 smc D Required for chromosome condensation and partitioning
MDLDOOCB_01125 8.3e-163 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
MDLDOOCB_01126 2.5e-288 pipD E Dipeptidase
MDLDOOCB_01128 3.4e-23
MDLDOOCB_01129 4.1e-133 cysA V ABC transporter, ATP-binding protein
MDLDOOCB_01130 4.2e-96 V FtsX-like permease family
MDLDOOCB_01131 3.5e-118 V FtsX-like permease family
MDLDOOCB_01132 3.7e-174 L Bifunctional protein
MDLDOOCB_01133 1.4e-31 O OsmC-like protein
MDLDOOCB_01134 2.4e-10 L Psort location Cytoplasmic, score
MDLDOOCB_01135 8.9e-92 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
MDLDOOCB_01136 2.8e-79 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
MDLDOOCB_01137 2.2e-226 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
MDLDOOCB_01138 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
MDLDOOCB_01139 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MDLDOOCB_01141 8.3e-138 L An automated process has identified a potential problem with this gene model
MDLDOOCB_01142 2.8e-48 S Peptidase propeptide and YPEB domain
MDLDOOCB_01143 6.5e-169 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
MDLDOOCB_01144 7.2e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
MDLDOOCB_01145 4.3e-52 K helix_turn_helix gluconate operon transcriptional repressor
MDLDOOCB_01146 2e-155 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
MDLDOOCB_01147 5e-125 C 2Fe-2S iron-sulfur cluster binding domain
MDLDOOCB_01148 1.4e-139 sufC O FeS assembly ATPase SufC
MDLDOOCB_01149 3.5e-174 sufD O FeS assembly protein SufD
MDLDOOCB_01150 5.3e-178 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MDLDOOCB_01151 2.4e-59 nifU C SUF system FeS assembly protein, NifU family
MDLDOOCB_01152 2e-266 sufB O assembly protein SufB
MDLDOOCB_01153 2.4e-45 yitW S Iron-sulfur cluster assembly protein
MDLDOOCB_01154 2.9e-247 mntH P H( )-stimulated, divalent metal cation uptake system
MDLDOOCB_01155 3.3e-127 L PFAM transposase IS116 IS110 IS902
MDLDOOCB_01156 7e-83 S Phage portal protein
MDLDOOCB_01157 1.4e-74 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
MDLDOOCB_01158 3.5e-50 S peptidase activity
MDLDOOCB_01159 7.3e-17 S Phage gp6-like head-tail connector protein
MDLDOOCB_01161 4.1e-23 S Bacteriophage HK97-gp10, putative tail-component
MDLDOOCB_01162 8.1e-13 S Protein of unknown function (DUF806)
MDLDOOCB_01163 1e-25 S Phage tail tube protein
MDLDOOCB_01166 7e-158 M Phage tail tape measure protein TP901
MDLDOOCB_01167 1.1e-37 S phage tail
MDLDOOCB_01168 1.4e-167 S Phage minor structural protein
MDLDOOCB_01171 6.4e-55 E GDSL-like Lipase/Acylhydrolase
MDLDOOCB_01175 3.8e-184 manA 5.3.1.8 G mannose-6-phosphate isomerase
MDLDOOCB_01176 2.7e-155 L Transposase
MDLDOOCB_01180 1.9e-237 brnQ U Component of the transport system for branched-chain amino acids
MDLDOOCB_01181 2.8e-24 S Alpha beta hydrolase
MDLDOOCB_01182 1.4e-273 lsa S ABC transporter
MDLDOOCB_01183 3.5e-107 S Protein of unknown function (DUF1211)
MDLDOOCB_01184 1.6e-102 ltrA S Bacterial low temperature requirement A protein (LtrA)
MDLDOOCB_01185 1.1e-163 L An automated process has identified a potential problem with this gene model
MDLDOOCB_01186 7.4e-120 3.6.1.55 F NUDIX domain
MDLDOOCB_01187 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
MDLDOOCB_01188 2e-155 P CorA-like Mg2+ transporter protein
MDLDOOCB_01189 1.2e-160 yvgN C Aldo keto reductase
MDLDOOCB_01190 0.0 tetP J elongation factor G
MDLDOOCB_01191 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
MDLDOOCB_01192 7.6e-134 EGP Major facilitator Superfamily
MDLDOOCB_01193 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MDLDOOCB_01196 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
MDLDOOCB_01197 1.3e-273 E amino acid
MDLDOOCB_01198 0.0 L Helicase C-terminal domain protein
MDLDOOCB_01199 4.8e-205 pbpX1 V Beta-lactamase
MDLDOOCB_01200 7.4e-225 N Uncharacterized conserved protein (DUF2075)
MDLDOOCB_01201 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
MDLDOOCB_01202 1.8e-79
MDLDOOCB_01203 1.5e-245 brnQ U Component of the transport system for branched-chain amino acids
MDLDOOCB_01204 0.0 L Plasmid pRiA4b ORF-3-like protein
MDLDOOCB_01205 6.1e-227 L COG3547 Transposase and inactivated derivatives
MDLDOOCB_01206 1.3e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
MDLDOOCB_01207 2.5e-08 S Protein of unknown function (DUF3021)
MDLDOOCB_01208 9e-34 K Bacterial regulatory helix-turn-helix protein, lysR family
MDLDOOCB_01209 1.6e-227 L Transposase
MDLDOOCB_01210 9.5e-34 rmaI K Transcriptional regulator
MDLDOOCB_01211 5.4e-171 lmrB EGP Major facilitator Superfamily
MDLDOOCB_01212 3.8e-196 S Uncharacterised protein family (UPF0236)
MDLDOOCB_01213 7.8e-202 XK27_00915 C Luciferase-like monooxygenase
MDLDOOCB_01214 6.5e-87 K GNAT family
MDLDOOCB_01215 1.4e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
MDLDOOCB_01217 1.5e-36
MDLDOOCB_01218 2.6e-286 P ABC transporter
MDLDOOCB_01219 7.6e-242 V ABC-type multidrug transport system, ATPase and permease components
MDLDOOCB_01220 2.4e-251 yifK E Amino acid permease
MDLDOOCB_01221 3.1e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
MDLDOOCB_01222 1.2e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
MDLDOOCB_01223 0.0 aha1 P E1-E2 ATPase
MDLDOOCB_01224 5.8e-177 F DNA/RNA non-specific endonuclease
MDLDOOCB_01225 1e-159 metQ2 P Belongs to the nlpA lipoprotein family
MDLDOOCB_01226 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MDLDOOCB_01227 2e-73 metI P ABC transporter permease
MDLDOOCB_01228 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
MDLDOOCB_01229 9.5e-261 frdC 1.3.5.4 C FAD binding domain
MDLDOOCB_01230 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
MDLDOOCB_01231 4.1e-253 pepC 3.4.22.40 E Peptidase C1-like family
MDLDOOCB_01232 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
MDLDOOCB_01233 4.7e-274 P Sodium:sulfate symporter transmembrane region
MDLDOOCB_01234 3.4e-91 ydjP I Alpha/beta hydrolase family
MDLDOOCB_01235 8.5e-53 ydjP I Alpha/beta hydrolase family
MDLDOOCB_01236 1.4e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
MDLDOOCB_01237 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
MDLDOOCB_01238 7.7e-166 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
MDLDOOCB_01239 9.2e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
MDLDOOCB_01240 7.9e-71 yeaL S Protein of unknown function (DUF441)
MDLDOOCB_01241 1.8e-22
MDLDOOCB_01242 1.2e-144 cbiQ P cobalt transport
MDLDOOCB_01243 0.0 ykoD P ABC transporter, ATP-binding protein
MDLDOOCB_01244 4.3e-95 S UPF0397 protein
MDLDOOCB_01245 7.4e-135 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_01246 8.1e-43 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_01247 2.9e-66 S Domain of unknown function DUF1828
MDLDOOCB_01248 5.5e-09
MDLDOOCB_01249 3.8e-51
MDLDOOCB_01250 2.6e-177 citR K Putative sugar-binding domain
MDLDOOCB_01251 1.9e-250 yjjP S Putative threonine/serine exporter
MDLDOOCB_01253 1.4e-39
MDLDOOCB_01254 2.3e-25 M domain protein
MDLDOOCB_01255 5.3e-84 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MDLDOOCB_01256 2.5e-175 prmA J Ribosomal protein L11 methyltransferase
MDLDOOCB_01257 4.2e-36
MDLDOOCB_01258 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MDLDOOCB_01259 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
MDLDOOCB_01260 9.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
MDLDOOCB_01261 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
MDLDOOCB_01262 9.8e-222 patA 2.6.1.1 E Aminotransferase
MDLDOOCB_01264 1e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
MDLDOOCB_01265 4.8e-34 S reductase
MDLDOOCB_01266 4.4e-39 S reductase
MDLDOOCB_01267 2.7e-32 S reductase
MDLDOOCB_01268 8.4e-148 yxeH S hydrolase
MDLDOOCB_01269 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MDLDOOCB_01270 1.1e-243 yfnA E Amino Acid
MDLDOOCB_01271 8.9e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
MDLDOOCB_01272 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
MDLDOOCB_01273 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
MDLDOOCB_01274 7.7e-293 I Acyltransferase
MDLDOOCB_01275 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
MDLDOOCB_01276 1.9e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
MDLDOOCB_01277 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
MDLDOOCB_01278 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
MDLDOOCB_01279 6.1e-131 sip L Belongs to the 'phage' integrase family
MDLDOOCB_01282 8.5e-24 S Hypothetical protein (DUF2513)
MDLDOOCB_01283 7.4e-20 S Pfam:Peptidase_M78
MDLDOOCB_01284 2.8e-20 ps115 K sequence-specific DNA binding
MDLDOOCB_01287 1.4e-16
MDLDOOCB_01288 8.7e-75 ps308 K AntA/AntB antirepressor
MDLDOOCB_01289 2.5e-14
MDLDOOCB_01295 5e-30 S HNH endonuclease
MDLDOOCB_01296 6.1e-70 S AAA domain
MDLDOOCB_01298 5.8e-154 res L Helicase C-terminal domain protein
MDLDOOCB_01300 3.2e-42 S Protein of unknown function (DUF669)
MDLDOOCB_01301 6.9e-272 S Phage plasmid primase, P4
MDLDOOCB_01313 3.3e-37 S VRR_NUC
MDLDOOCB_01315 7.7e-18
MDLDOOCB_01316 2.5e-48 S HNH endonuclease
MDLDOOCB_01317 2.7e-55 S Phage terminase, small subunit
MDLDOOCB_01319 1.7e-212 S Phage Terminase
MDLDOOCB_01321 2.2e-133 S Phage portal protein
MDLDOOCB_01322 1.9e-87 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
MDLDOOCB_01323 1.3e-52 S peptidase activity
MDLDOOCB_01324 5.5e-19 S Phage gp6-like head-tail connector protein
MDLDOOCB_01326 2.8e-12 S Bacteriophage HK97-gp10, putative tail-component
MDLDOOCB_01328 1.2e-12 S Pfam:Phage_TTP_1
MDLDOOCB_01331 1.6e-129 M Phage tail tape measure protein TP901
MDLDOOCB_01332 1.2e-34 S phage tail
MDLDOOCB_01333 4.5e-131 S Phage minor structural protein
MDLDOOCB_01335 7.7e-07 S Domain of unknown function (DUF2479)
MDLDOOCB_01342 4e-38 S Bacteriophage holin of superfamily 6 (Holin_LLH)
MDLDOOCB_01343 7.6e-102 M hydrolase, family 25
MDLDOOCB_01345 6.8e-10
MDLDOOCB_01346 1.8e-308 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
MDLDOOCB_01347 2.3e-23 S Protein of unknown function (DUF2929)
MDLDOOCB_01348 0.0 dnaE 2.7.7.7 L DNA polymerase
MDLDOOCB_01349 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
MDLDOOCB_01350 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
MDLDOOCB_01351 1e-167 cvfB S S1 domain
MDLDOOCB_01352 2.9e-165 xerD D recombinase XerD
MDLDOOCB_01353 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
MDLDOOCB_01354 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
MDLDOOCB_01355 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
MDLDOOCB_01356 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
MDLDOOCB_01357 3.7e-174 L Bifunctional protein
MDLDOOCB_01358 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
MDLDOOCB_01359 2.7e-18 M Lysin motif
MDLDOOCB_01360 5e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
MDLDOOCB_01361 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
MDLDOOCB_01362 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
MDLDOOCB_01363 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
MDLDOOCB_01364 8.7e-229 S Tetratricopeptide repeat protein
MDLDOOCB_01365 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MDLDOOCB_01366 1.6e-227 L Transposase
MDLDOOCB_01367 1.5e-81 yxaM EGP Major facilitator Superfamily
MDLDOOCB_01368 5.2e-69 yxaM EGP Major facilitator Superfamily
MDLDOOCB_01369 2.9e-117 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
MDLDOOCB_01370 1e-79 S AAA domain
MDLDOOCB_01371 3.3e-61 3.6.1.55 F NUDIX domain
MDLDOOCB_01372 1.1e-163 L An automated process has identified a potential problem with this gene model
MDLDOOCB_01373 1.9e-138 2.4.2.3 F Phosphorylase superfamily
MDLDOOCB_01374 9e-144 2.4.2.3 F Phosphorylase superfamily
MDLDOOCB_01375 3.6e-151 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
MDLDOOCB_01376 2.7e-155 L Transposase
MDLDOOCB_01377 9.7e-65 yagE E amino acid
MDLDOOCB_01378 8.4e-128 yagE E Amino acid permease
MDLDOOCB_01379 4.3e-86 3.4.21.96 S SLAP domain
MDLDOOCB_01380 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
MDLDOOCB_01381 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
MDLDOOCB_01382 1.2e-107 hlyIII S protein, hemolysin III
MDLDOOCB_01383 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
MDLDOOCB_01384 7.1e-36 yozE S Belongs to the UPF0346 family
MDLDOOCB_01385 1.1e-66 yjcE P NhaP-type Na H and K H
MDLDOOCB_01386 9.6e-40 yjcE P Sodium proton antiporter
MDLDOOCB_01387 1.9e-94 yjcE P Sodium proton antiporter
MDLDOOCB_01388 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
MDLDOOCB_01389 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MDLDOOCB_01390 5.8e-152 dprA LU DNA protecting protein DprA
MDLDOOCB_01391 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MDLDOOCB_01392 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
MDLDOOCB_01393 6.5e-141 xerC D Phage integrase, N-terminal SAM-like domain
MDLDOOCB_01394 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
MDLDOOCB_01395 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
MDLDOOCB_01396 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
MDLDOOCB_01397 7.1e-63 M LysM domain protein
MDLDOOCB_01398 5.3e-139 L hmm pf00665
MDLDOOCB_01399 1.4e-98 L Helix-turn-helix domain
MDLDOOCB_01400 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
MDLDOOCB_01401 3.2e-53 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MDLDOOCB_01403 4.2e-50 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MDLDOOCB_01404 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
MDLDOOCB_01405 1.4e-115 mmuP E amino acid
MDLDOOCB_01406 3.6e-271 pepV 3.5.1.18 E dipeptidase PepV
MDLDOOCB_01407 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
MDLDOOCB_01408 3.2e-283 E Amino acid permease
MDLDOOCB_01409 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
MDLDOOCB_01410 5.1e-245 ynbB 4.4.1.1 P aluminum resistance
MDLDOOCB_01411 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
MDLDOOCB_01412 5.7e-163 L An automated process has identified a potential problem with this gene model
MDLDOOCB_01413 4.2e-160 L PFAM transposase, IS4 family protein
MDLDOOCB_01414 1.3e-149 oppA E ABC transporter substrate-binding protein
MDLDOOCB_01415 2.2e-54 oppA E ABC transporter substrate-binding protein
MDLDOOCB_01416 9.9e-82 C Flavodoxin
MDLDOOCB_01417 0.0 uvrA3 L excinuclease ABC, A subunit
MDLDOOCB_01418 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
MDLDOOCB_01419 2.1e-114 3.6.1.27 I Acid phosphatase homologues
MDLDOOCB_01420 7.4e-205 L COG2826 Transposase and inactivated derivatives, IS30 family
MDLDOOCB_01421 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
MDLDOOCB_01422 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
MDLDOOCB_01423 9.3e-204 pbpX1 V Beta-lactamase
MDLDOOCB_01424 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
MDLDOOCB_01425 7.5e-95 S ECF-type riboflavin transporter, S component
MDLDOOCB_01426 1.3e-229 S Putative peptidoglycan binding domain
MDLDOOCB_01427 3e-15 K Acetyltransferase (GNAT) domain
MDLDOOCB_01428 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
MDLDOOCB_01429 1.2e-190 yrvN L AAA C-terminal domain
MDLDOOCB_01430 5.7e-65 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
MDLDOOCB_01431 7.3e-283 treB G phosphotransferase system
MDLDOOCB_01432 8.9e-101 treR K UTRA
MDLDOOCB_01433 1.1e-284 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
MDLDOOCB_01434 5.7e-18
MDLDOOCB_01435 7.3e-239 G Bacterial extracellular solute-binding protein
MDLDOOCB_01436 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
MDLDOOCB_01437 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
MDLDOOCB_01439 0.0 S SLAP domain
MDLDOOCB_01440 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
MDLDOOCB_01441 1.1e-195 hsdR 3.1.21.3 L DEAD/DEAH box helicase
MDLDOOCB_01442 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
MDLDOOCB_01443 3.4e-42 S RloB-like protein
MDLDOOCB_01444 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
MDLDOOCB_01445 6.6e-51 3.1.21.3 V Type I restriction modification DNA specificity domain
MDLDOOCB_01446 8.3e-45 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
MDLDOOCB_01447 1.6e-82 L Transposase
MDLDOOCB_01448 1.2e-63 S SIR2-like domain
MDLDOOCB_01449 3.2e-10 S Domain of unknown function DUF87
MDLDOOCB_01450 1.3e-221 L Transposase
MDLDOOCB_01451 2.2e-74 S cog cog0433
MDLDOOCB_01452 1.9e-110 F DNA/RNA non-specific endonuclease
MDLDOOCB_01453 2.7e-34 S YSIRK type signal peptide
MDLDOOCB_01455 5.5e-53
MDLDOOCB_01456 2.3e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
MDLDOOCB_01457 1.4e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
MDLDOOCB_01458 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
MDLDOOCB_01459 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
MDLDOOCB_01460 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
MDLDOOCB_01461 0.0 FbpA K Fibronectin-binding protein
MDLDOOCB_01462 1.1e-66
MDLDOOCB_01463 1.3e-159 degV S EDD domain protein, DegV family
MDLDOOCB_01464 9e-60 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
MDLDOOCB_01465 5.8e-221 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
MDLDOOCB_01466 5.4e-203 xerS L Belongs to the 'phage' integrase family
MDLDOOCB_01467 4.1e-67
MDLDOOCB_01468 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
MDLDOOCB_01469 5.2e-198 M Glycosyl hydrolases family 25
MDLDOOCB_01470 2e-39 S Transglycosylase associated protein
MDLDOOCB_01471 2.7e-155 L Transposase
MDLDOOCB_01472 2.7e-123 yoaK S Protein of unknown function (DUF1275)
MDLDOOCB_01473 2.7e-155 L Transposase
MDLDOOCB_01474 4e-57 K Helix-turn-helix domain
MDLDOOCB_01475 2.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
MDLDOOCB_01476 2.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
MDLDOOCB_01477 5.6e-183 K Transcriptional regulator
MDLDOOCB_01478 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
MDLDOOCB_01479 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
MDLDOOCB_01480 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
MDLDOOCB_01481 0.0 snf 2.7.11.1 KL domain protein
MDLDOOCB_01482 1.6e-227 L Transposase
MDLDOOCB_01483 1.8e-79
MDLDOOCB_01486 2e-35
MDLDOOCB_01488 3.8e-104 pncA Q Isochorismatase family
MDLDOOCB_01489 4.9e-118
MDLDOOCB_01492 3.6e-63
MDLDOOCB_01493 1.4e-34
MDLDOOCB_01494 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
MDLDOOCB_01495 3.7e-174 L Bifunctional protein
MDLDOOCB_01496 3.4e-79
MDLDOOCB_01497 1e-242 cpdA S Calcineurin-like phosphoesterase
MDLDOOCB_01498 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
MDLDOOCB_01499 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
MDLDOOCB_01500 1e-107 ypsA S Belongs to the UPF0398 family
MDLDOOCB_01501 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
MDLDOOCB_01502 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
MDLDOOCB_01503 6.1e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MDLDOOCB_01504 1.3e-114 dnaD L DnaD domain protein
MDLDOOCB_01505 1.5e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
MDLDOOCB_01506 9.2e-89 ypmB S Protein conserved in bacteria
MDLDOOCB_01507 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
MDLDOOCB_01508 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
MDLDOOCB_01509 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
MDLDOOCB_01510 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
MDLDOOCB_01511 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
MDLDOOCB_01512 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
MDLDOOCB_01513 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
MDLDOOCB_01514 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
MDLDOOCB_01515 8.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
MDLDOOCB_01516 9.7e-169
MDLDOOCB_01517 7.5e-143
MDLDOOCB_01518 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
MDLDOOCB_01519 1.4e-26
MDLDOOCB_01520 3.8e-79
MDLDOOCB_01521 1.8e-75 V FtsX-like permease family
MDLDOOCB_01522 3.8e-160 L hmm pf00665
MDLDOOCB_01523 5.8e-100 L Helix-turn-helix domain
MDLDOOCB_01524 7.3e-192 yfnA E amino acid
MDLDOOCB_01525 3.4e-43
MDLDOOCB_01526 5.1e-137
MDLDOOCB_01527 4.5e-141
MDLDOOCB_01528 2.8e-123 skfE V ATPases associated with a variety of cellular activities
MDLDOOCB_01529 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
MDLDOOCB_01530 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
MDLDOOCB_01531 3.2e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
MDLDOOCB_01532 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
MDLDOOCB_01533 4.8e-81 mutT 3.6.1.55 F NUDIX domain
MDLDOOCB_01534 1.4e-127 S Peptidase family M23
MDLDOOCB_01535 3.8e-160 L hmm pf00665
MDLDOOCB_01536 5.8e-100 L Helix-turn-helix domain
MDLDOOCB_01537 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
MDLDOOCB_01538 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
MDLDOOCB_01539 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
MDLDOOCB_01540 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
MDLDOOCB_01541 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
MDLDOOCB_01542 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
MDLDOOCB_01543 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
MDLDOOCB_01544 2.5e-175 phoH T phosphate starvation-inducible protein PhoH
MDLDOOCB_01545 3.5e-71 yqeY S YqeY-like protein
MDLDOOCB_01546 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
MDLDOOCB_01547 3.6e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
MDLDOOCB_01548 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
MDLDOOCB_01549 1.4e-170 L Transposase
MDLDOOCB_01550 4e-40 S CRISPR-associated protein (Cas_Csn2)
MDLDOOCB_01551 8.3e-40 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
MDLDOOCB_01552 3e-130 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
MDLDOOCB_01553 5.1e-181 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
MDLDOOCB_01554 3.3e-163 L An automated process has identified a potential problem with this gene model
MDLDOOCB_01555 1.7e-82 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
MDLDOOCB_01556 2e-117 S Peptidase family M23
MDLDOOCB_01557 1e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MDLDOOCB_01558 2.7e-16 S Phage portal protein
MDLDOOCB_01560 7.2e-219 S Phage Terminase
MDLDOOCB_01563 9.3e-56 L Phage terminase, small subunit
MDLDOOCB_01564 7.8e-62 L HNH nucleases
MDLDOOCB_01565 1.1e-08
MDLDOOCB_01571 1e-83 ps308 K AntA/AntB antirepressor
MDLDOOCB_01576 1.1e-24 S HNH endonuclease
MDLDOOCB_01577 1.3e-09
MDLDOOCB_01580 1.1e-20 L Psort location Cytoplasmic, score
MDLDOOCB_01588 2.3e-10 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_01589 5.2e-73 3.4.21.88 K Peptidase S24-like
MDLDOOCB_01590 2.5e-30 S Hypothetical protein (DUF2513)
MDLDOOCB_01593 1.6e-180 V Abi-like protein
MDLDOOCB_01594 3.1e-122 L Belongs to the 'phage' integrase family
MDLDOOCB_01595 2.3e-08 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MDLDOOCB_01597 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
MDLDOOCB_01598 2.5e-118
MDLDOOCB_01599 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
MDLDOOCB_01600 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
MDLDOOCB_01601 2.6e-280 thrC 4.2.3.1 E Threonine synthase
MDLDOOCB_01602 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
MDLDOOCB_01603 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
MDLDOOCB_01604 0.0 L PLD-like domain
MDLDOOCB_01605 4.8e-42 S SnoaL-like domain
MDLDOOCB_01606 5.4e-53 hipB K sequence-specific DNA binding
MDLDOOCB_01607 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
MDLDOOCB_01608 3.4e-27
MDLDOOCB_01609 1.3e-221 L Transposase
MDLDOOCB_01610 7.8e-52 V ABC-type multidrug transport system, ATPase and permease components
MDLDOOCB_01611 8.9e-276 V ABC-type multidrug transport system, ATPase and permease components
MDLDOOCB_01612 3e-72 L Transposase
MDLDOOCB_01613 1.8e-26 L Transposase
MDLDOOCB_01614 1.4e-94
MDLDOOCB_01615 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
MDLDOOCB_01616 9e-98
MDLDOOCB_01617 4.9e-108 K LysR substrate binding domain
MDLDOOCB_01618 1e-20
MDLDOOCB_01619 2.3e-215 S Sterol carrier protein domain
MDLDOOCB_01620 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
MDLDOOCB_01621 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
MDLDOOCB_01622 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MDLDOOCB_01623 8.8e-234 arcA 3.5.3.6 E Arginine
MDLDOOCB_01624 1.2e-136 lysR5 K LysR substrate binding domain
MDLDOOCB_01625 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
MDLDOOCB_01626 1e-48 S Metal binding domain of Ada
MDLDOOCB_01627 2.7e-155 L Transposase
MDLDOOCB_01628 2.3e-43 ybhL S Belongs to the BI1 family
MDLDOOCB_01629 1.2e-210 S Bacterial protein of unknown function (DUF871)
MDLDOOCB_01630 3.8e-93 licR 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT domain protein
MDLDOOCB_01631 1.2e-280 ybgG 3.2.1.170 GH38 G Glycosyl hydrolases family 38 N-terminal domain
MDLDOOCB_01632 1.4e-150 mngA 2.7.1.195, 2.7.1.202 U system, fructose-specific IIC component
MDLDOOCB_01633 5.3e-37 mngA 2.7.1.195, 2.7.1.202 G Psort location Cytoplasmic, score 9.98
MDLDOOCB_01634 2e-42 fryA 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
MDLDOOCB_01635 4.2e-46 L COG3547 Transposase and inactivated derivatives
MDLDOOCB_01636 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MDLDOOCB_01637 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
MDLDOOCB_01638 1.5e-102 srtA 3.4.22.70 M sortase family
MDLDOOCB_01639 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
MDLDOOCB_01640 5.8e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
MDLDOOCB_01641 0.0 dnaK O Heat shock 70 kDa protein
MDLDOOCB_01642 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
MDLDOOCB_01643 4.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
MDLDOOCB_01644 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
MDLDOOCB_01645 7.8e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
MDLDOOCB_01646 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
MDLDOOCB_01647 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
MDLDOOCB_01648 3.2e-47 rplGA J ribosomal protein
MDLDOOCB_01649 8.8e-47 ylxR K Protein of unknown function (DUF448)
MDLDOOCB_01650 1.4e-196 nusA K Participates in both transcription termination and antitermination
MDLDOOCB_01651 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
MDLDOOCB_01652 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MDLDOOCB_01653 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
MDLDOOCB_01654 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
MDLDOOCB_01655 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
MDLDOOCB_01656 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
MDLDOOCB_01657 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
MDLDOOCB_01658 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
MDLDOOCB_01659 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
MDLDOOCB_01660 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
MDLDOOCB_01661 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
MDLDOOCB_01662 2.9e-116 plsC 2.3.1.51 I Acyltransferase
MDLDOOCB_01663 9e-220 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
MDLDOOCB_01664 0.0 pepO 3.4.24.71 O Peptidase family M13
MDLDOOCB_01665 0.0 mdlB V ABC transporter
MDLDOOCB_01666 2.1e-230 mdlA V ABC transporter
MDLDOOCB_01667 2e-89 mdlA V ABC transporter
MDLDOOCB_01668 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
MDLDOOCB_01669 3e-38 ynzC S UPF0291 protein
MDLDOOCB_01670 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
MDLDOOCB_01671 1.4e-20 E GDSL-like Lipase/Acylhydrolase family
MDLDOOCB_01672 8.5e-203 L Putative transposase DNA-binding domain
MDLDOOCB_01673 9.5e-112 L Resolvase, N-terminal
MDLDOOCB_01674 1.3e-114 E GDSL-like Lipase/Acylhydrolase family
MDLDOOCB_01675 2.1e-120 ung2 3.2.2.27 L Uracil-DNA glycosylase
MDLDOOCB_01676 6.7e-212 S SLAP domain
MDLDOOCB_01677 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
MDLDOOCB_01678 3.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
MDLDOOCB_01679 3.4e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
MDLDOOCB_01680 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
MDLDOOCB_01681 1.7e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
MDLDOOCB_01682 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
MDLDOOCB_01683 2e-58 L Transposase
MDLDOOCB_01684 1.7e-151
MDLDOOCB_01686 1.3e-246 ydaM M Glycosyl transferase
MDLDOOCB_01687 3.5e-205 G Glycosyl hydrolases family 8
MDLDOOCB_01688 1.1e-67 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_01689 2.2e-14 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_01690 1.5e-13 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_01691 7.7e-10 C Flavodoxin
MDLDOOCB_01692 3.2e-79 S X-Pro dipeptidyl-peptidase (S15 family)
MDLDOOCB_01693 3.3e-45 K Tetracycline repressor, C-terminal all-alpha domain
MDLDOOCB_01695 6.6e-90 K LysR substrate binding domain
MDLDOOCB_01696 8.9e-34 S Domain of unknown function (DUF4440)
MDLDOOCB_01697 1.3e-68 GM NAD(P)H-binding
MDLDOOCB_01698 7e-135 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
MDLDOOCB_01699 1.2e-49 S Belongs to the short-chain dehydrogenases reductases (SDR) family
MDLDOOCB_01700 3.7e-26 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
MDLDOOCB_01701 1.1e-192 L Transposase and inactivated derivatives, IS30 family
MDLDOOCB_01702 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MDLDOOCB_01703 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
MDLDOOCB_01704 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
MDLDOOCB_01705 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
MDLDOOCB_01706 0.0 comEC S Competence protein ComEC
MDLDOOCB_01707 3.1e-79 comEA L Competence protein ComEA
MDLDOOCB_01708 6.9e-187 ylbL T Belongs to the peptidase S16 family
MDLDOOCB_01709 1.1e-81 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
MDLDOOCB_01710 1.3e-96 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
MDLDOOCB_01711 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
MDLDOOCB_01712 2.7e-211 ftsW D Belongs to the SEDS family
MDLDOOCB_01713 0.0 typA T GTP-binding protein TypA
MDLDOOCB_01714 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
MDLDOOCB_01715 9.3e-33 ykzG S Belongs to the UPF0356 family
MDLDOOCB_01716 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MDLDOOCB_01717 2.7e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
MDLDOOCB_01718 1.6e-294 L Nuclease-related domain
MDLDOOCB_01719 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
MDLDOOCB_01720 3.1e-105 S Repeat protein
MDLDOOCB_01721 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
MDLDOOCB_01722 5.3e-139 L hmm pf00665
MDLDOOCB_01723 1.4e-98 L Helix-turn-helix domain
MDLDOOCB_01724 1.3e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
MDLDOOCB_01725 2.2e-57 XK27_04120 S Putative amino acid metabolism
MDLDOOCB_01726 2.1e-216 iscS 2.8.1.7 E Aminotransferase class V
MDLDOOCB_01727 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
MDLDOOCB_01728 3e-37
MDLDOOCB_01729 9.8e-103 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
MDLDOOCB_01730 1e-30 cspA K 'Cold-shock' DNA-binding domain
MDLDOOCB_01731 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MDLDOOCB_01732 1.1e-73 gpsB D DivIVA domain protein
MDLDOOCB_01733 8.2e-148 ylmH S S4 domain protein
MDLDOOCB_01734 1.7e-45 yggT S YGGT family
MDLDOOCB_01735 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
MDLDOOCB_01736 8.5e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
MDLDOOCB_01737 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
MDLDOOCB_01738 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
MDLDOOCB_01739 5.7e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MDLDOOCB_01740 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MDLDOOCB_01741 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MDLDOOCB_01742 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
MDLDOOCB_01743 1.8e-54 ftsL D Cell division protein FtsL
MDLDOOCB_01744 2.7e-174 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
MDLDOOCB_01745 6.3e-78 mraZ K Belongs to the MraZ family
MDLDOOCB_01746 6.4e-54 S Protein of unknown function (DUF3397)
MDLDOOCB_01748 2.7e-94 mreD
MDLDOOCB_01749 2e-147 mreC M Involved in formation and maintenance of cell shape
MDLDOOCB_01750 2.4e-176 mreB D cell shape determining protein MreB
MDLDOOCB_01751 2.3e-108 radC L DNA repair protein
MDLDOOCB_01752 5.7e-126 S Haloacid dehalogenase-like hydrolase
MDLDOOCB_01753 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
MDLDOOCB_01754 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
MDLDOOCB_01755 9e-36 S Cytochrome B5
MDLDOOCB_01756 3.9e-167 arbZ I Phosphate acyltransferases
MDLDOOCB_01757 8.7e-181 arbY M Glycosyl transferase family 8
MDLDOOCB_01758 1.5e-143 arbY M Glycosyl transferase family 8
MDLDOOCB_01759 9.4e-156 L Transposase
MDLDOOCB_01761 1.5e-155 arbx M Glycosyl transferase family 8
MDLDOOCB_01762 4.2e-149 arbV 2.3.1.51 I Acyl-transferase
MDLDOOCB_01764 4.9e-34
MDLDOOCB_01766 1.8e-130 K response regulator
MDLDOOCB_01767 2.2e-305 vicK 2.7.13.3 T Histidine kinase
MDLDOOCB_01768 3.3e-258 yycH S YycH protein
MDLDOOCB_01769 3.4e-149 yycI S YycH protein
MDLDOOCB_01770 4.1e-147 vicX 3.1.26.11 S domain protein
MDLDOOCB_01771 3.3e-151 htrA 3.4.21.107 O serine protease
MDLDOOCB_01772 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
MDLDOOCB_01773 1.6e-33 G Peptidase_C39 like family
MDLDOOCB_01774 4.4e-163 M NlpC/P60 family
MDLDOOCB_01775 1e-91 G Peptidase_C39 like family
MDLDOOCB_01776 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
MDLDOOCB_01777 9.6e-78 P Cobalt transport protein
MDLDOOCB_01778 2.4e-248 cbiO1 S ABC transporter, ATP-binding protein
MDLDOOCB_01779 7.9e-174 K helix_turn_helix, arabinose operon control protein
MDLDOOCB_01780 6.4e-157 htpX O Belongs to the peptidase M48B family
MDLDOOCB_01781 9.7e-95 lemA S LemA family
MDLDOOCB_01782 9.8e-192 ybiR P Citrate transporter
MDLDOOCB_01783 7.8e-70 S Iron-sulphur cluster biosynthesis
MDLDOOCB_01784 1.7e-211 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
MDLDOOCB_01785 7.2e-83 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
MDLDOOCB_01786 1.2e-17
MDLDOOCB_01787 1.1e-07 S Uncharacterised protein family (UPF0236)
MDLDOOCB_01788 1.2e-189 ydaM M Glycosyl transferase
MDLDOOCB_01789 1.3e-175 G Glycosyl hydrolases family 8
MDLDOOCB_01790 1.1e-118 yfbR S HD containing hydrolase-like enzyme
MDLDOOCB_01791 1.4e-164 L HNH nucleases
MDLDOOCB_01792 4.8e-51
MDLDOOCB_01793 3.3e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
MDLDOOCB_01794 0.0 3.6.3.8 P P-type ATPase
MDLDOOCB_01796 2.9e-44
MDLDOOCB_01797 1.5e-94 S Protein of unknown function (DUF3990)
MDLDOOCB_01798 3.1e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
MDLDOOCB_01799 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
MDLDOOCB_01800 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
MDLDOOCB_01801 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
MDLDOOCB_01802 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
MDLDOOCB_01803 4.8e-224 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MDLDOOCB_01804 3.7e-213 iscS2 2.8.1.7 E Aminotransferase class V
MDLDOOCB_01805 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
MDLDOOCB_01806 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
MDLDOOCB_01807 1.3e-84 yueI S Protein of unknown function (DUF1694)
MDLDOOCB_01808 2.2e-238 rarA L recombination factor protein RarA
MDLDOOCB_01809 8.4e-39
MDLDOOCB_01810 1.8e-78 usp6 T universal stress protein
MDLDOOCB_01811 4.7e-216 rodA D Belongs to the SEDS family
MDLDOOCB_01812 3.3e-33 S Protein of unknown function (DUF2969)
MDLDOOCB_01813 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
MDLDOOCB_01814 1.2e-177 mbl D Cell shape determining protein MreB Mrl
MDLDOOCB_01815 2e-30 ywzB S Protein of unknown function (DUF1146)
MDLDOOCB_01816 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
MDLDOOCB_01817 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
MDLDOOCB_01818 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
MDLDOOCB_01819 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
MDLDOOCB_01820 6.3e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MDLDOOCB_01821 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
MDLDOOCB_01822 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MDLDOOCB_01823 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
MDLDOOCB_01824 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
MDLDOOCB_01825 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
MDLDOOCB_01826 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
MDLDOOCB_01827 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
MDLDOOCB_01828 1.3e-113 tdk 2.7.1.21 F thymidine kinase
MDLDOOCB_01829 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
MDLDOOCB_01832 3.9e-195 ampC V Beta-lactamase
MDLDOOCB_01833 2.4e-216 EGP Major facilitator Superfamily
MDLDOOCB_01834 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
MDLDOOCB_01835 3.8e-105 vanZ V VanZ like family
MDLDOOCB_01836 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
MDLDOOCB_01837 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
MDLDOOCB_01838 4.4e-129 K Transcriptional regulatory protein, C terminal
MDLDOOCB_01839 7.7e-67 S SdpI/YhfL protein family
MDLDOOCB_01840 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
MDLDOOCB_01841 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
MDLDOOCB_01842 1.3e-88 M Protein of unknown function (DUF3737)
MDLDOOCB_01844 1e-15 S Domain of Unknown Function with PDB structure (DUF3850)
MDLDOOCB_01845 1.3e-221 L Transposase
MDLDOOCB_01846 1.2e-74
MDLDOOCB_01847 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MDLDOOCB_01848 1.3e-168 dnaI L Primosomal protein DnaI
MDLDOOCB_01849 8.6e-251 dnaB L Replication initiation and membrane attachment
MDLDOOCB_01850 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
MDLDOOCB_01851 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
MDLDOOCB_01852 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
MDLDOOCB_01853 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MDLDOOCB_01854 3.8e-30
MDLDOOCB_01855 8e-12 relB L RelB antitoxin
MDLDOOCB_01856 3.2e-15 relB L RelB antitoxin
MDLDOOCB_01857 1.1e-34 S Bacterial toxin of type II toxin-antitoxin system, YafQ
MDLDOOCB_01858 6.5e-82 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
MDLDOOCB_01859 3.3e-241 V N-6 DNA Methylase
MDLDOOCB_01860 2.4e-99 L An automated process has identified a potential problem with this gene model
MDLDOOCB_01861 8.3e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
MDLDOOCB_01862 9.8e-12 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
MDLDOOCB_01863 5.5e-40 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
MDLDOOCB_01864 6.5e-18 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
MDLDOOCB_01865 9.7e-205 gatC G PTS system sugar-specific permease component
MDLDOOCB_01866 1.2e-24 2.7.1.200, 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
MDLDOOCB_01868 7.9e-16 L An automated process has identified a potential problem with this gene model
MDLDOOCB_01869 9.4e-51 L An automated process has identified a potential problem with this gene model
MDLDOOCB_01871 1e-66 doc S Fic/DOC family
MDLDOOCB_01872 4.1e-34
MDLDOOCB_01874 1.1e-23 S CAAX protease self-immunity
MDLDOOCB_01876 3.7e-133 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
MDLDOOCB_01878 9.6e-18 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
MDLDOOCB_01879 1.7e-23 relB L Addiction module antitoxin, RelB DinJ family
MDLDOOCB_01880 6.1e-48 E Pfam:DUF955
MDLDOOCB_01882 2.2e-61 L Transposase
MDLDOOCB_01883 2.1e-111 S Fic/DOC family
MDLDOOCB_01884 5.5e-38 L Protein of unknown function (DUF3991)
MDLDOOCB_01885 6.3e-54 S COG0790 FOG TPR repeat, SEL1 subfamily
MDLDOOCB_01891 3.4e-17 CO COG0526, thiol-disulfide isomerase and thioredoxins
MDLDOOCB_01894 4.3e-136 S Alpha/beta hydrolase family
MDLDOOCB_01895 2.5e-11 L Transposase
MDLDOOCB_01896 3.8e-84 dps P Belongs to the Dps family
MDLDOOCB_01897 1.8e-55 S pyridoxamine 5-phosphate
MDLDOOCB_01898 2e-129 yobV1 K WYL domain
MDLDOOCB_01899 1.9e-86 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
MDLDOOCB_01900 2.1e-57 dps P Belongs to the Dps family
MDLDOOCB_01901 3.2e-19
MDLDOOCB_01903 2.9e-175 M Glycosyl hydrolases family 25
MDLDOOCB_01904 1.3e-29
MDLDOOCB_01905 2e-17
MDLDOOCB_01907 3.7e-08
MDLDOOCB_01908 1.1e-18 S Phage uncharacterised protein (Phage_XkdX)
MDLDOOCB_01909 6.2e-25
MDLDOOCB_01914 4.4e-39
MDLDOOCB_01916 2.5e-35 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
MDLDOOCB_01917 5.9e-24
MDLDOOCB_01918 1.8e-177 M Glycosyl hydrolases family 25
MDLDOOCB_01919 8e-27
MDLDOOCB_01920 7e-16
MDLDOOCB_01922 1.7e-16
MDLDOOCB_01924 1.2e-10
MDLDOOCB_01929 4.9e-70
MDLDOOCB_01930 3.4e-35
MDLDOOCB_01931 1.4e-09
MDLDOOCB_01932 2.3e-114 Z012_12235 S Baseplate J-like protein
MDLDOOCB_01933 7.4e-29
MDLDOOCB_01934 5.9e-37
MDLDOOCB_01935 1.9e-102
MDLDOOCB_01936 3.6e-46
MDLDOOCB_01937 5e-59 M LysM domain
MDLDOOCB_01938 4e-175 M Phage tail tape measure protein TP901
MDLDOOCB_01939 9.1e-127 Z012_12235 S Baseplate J-like protein
MDLDOOCB_01940 1.6e-32
MDLDOOCB_01941 1.5e-44
MDLDOOCB_01942 7e-110
MDLDOOCB_01943 1.2e-36
MDLDOOCB_01944 1.4e-43 M LysM domain
MDLDOOCB_01945 2.5e-227 3.4.14.13 M Phage tail tape measure protein TP901
MDLDOOCB_01947 2.9e-09
MDLDOOCB_01948 1.4e-29
MDLDOOCB_01949 1.3e-102 Z012_02110 S Protein of unknown function (DUF3383)
MDLDOOCB_01950 3.2e-28
MDLDOOCB_01951 5.4e-20 S Protein of unknown function (DUF4054)
MDLDOOCB_01952 1.3e-91 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
MDLDOOCB_01953 5.3e-34
MDLDOOCB_01954 3.4e-60 S Uncharacterized protein conserved in bacteria (DUF2213)
MDLDOOCB_01955 1.2e-10 S Lysin motif
MDLDOOCB_01956 1.3e-47 S Phage Mu protein F like protein
MDLDOOCB_01957 1.4e-134 S Protein of unknown function (DUF1073)
MDLDOOCB_01958 2.5e-219 S Terminase-like family
MDLDOOCB_01959 1.4e-26 L Terminase small subunit
MDLDOOCB_01960 5.2e-10 hicA N HicA toxin of bacterial toxin-antitoxin,
MDLDOOCB_01961 2.7e-35 S HicB_like antitoxin of bacterial toxin-antitoxin system
MDLDOOCB_01969 7.1e-15
MDLDOOCB_01971 7.9e-46 S VRR_NUC
MDLDOOCB_01979 1.2e-100 L Helix-turn-helix domain
MDLDOOCB_01980 1.5e-130 S ERF superfamily
MDLDOOCB_01981 5.2e-127 S Protein of unknown function (DUF1351)
MDLDOOCB_01982 4.6e-45
MDLDOOCB_01984 5.5e-18
MDLDOOCB_01985 1.4e-31 S Helix-turn-helix domain
MDLDOOCB_01991 4.9e-94 S DNA binding
MDLDOOCB_01992 1.4e-17 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_01993 6.8e-22 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_01994 2.4e-07 S Pfam:DUF955
MDLDOOCB_01995 1.6e-07 M Host cell surface-exposed lipoprotein
MDLDOOCB_01996 4.6e-12
MDLDOOCB_01997 2.6e-94 sip L Belongs to the 'phage' integrase family
MDLDOOCB_01998 6.4e-09 dps P Belongs to the Dps family
MDLDOOCB_01999 1.2e-30 copZ C Heavy-metal-associated domain
MDLDOOCB_02000 1e-284 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
MDLDOOCB_02001 1.9e-30 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
MDLDOOCB_02002 6.3e-26 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
MDLDOOCB_02003 1.6e-172 MA20_14895 S Conserved hypothetical protein 698
MDLDOOCB_02005 3.2e-178 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
MDLDOOCB_02006 4.6e-100 3.6.1.27 I Acid phosphatase homologues
MDLDOOCB_02007 2.2e-151 yitS S Uncharacterised protein, DegV family COG1307
MDLDOOCB_02008 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
MDLDOOCB_02009 7.5e-91 S Domain of unknown function (DUF4767)
MDLDOOCB_02010 8e-38 C nitroreductase
MDLDOOCB_02011 5e-28 C nitroreductase
MDLDOOCB_02012 9.2e-137 ypbG 2.7.1.2 GK ROK family
MDLDOOCB_02013 5.8e-274 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
MDLDOOCB_02014 3.7e-223 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
MDLDOOCB_02015 4.2e-119 gmuR K UTRA
MDLDOOCB_02016 5.4e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
MDLDOOCB_02017 3.2e-71 S Domain of unknown function (DUF3284)
MDLDOOCB_02018 1.1e-248 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
MDLDOOCB_02019 1.6e-61
MDLDOOCB_02020 2.2e-58 L An automated process has identified a potential problem with this gene model
MDLDOOCB_02021 1.8e-80 L An automated process has identified a potential problem with this gene model
MDLDOOCB_02027 4e-22 radC L DNA repair protein
MDLDOOCB_02029 1.5e-19 K transcriptional
MDLDOOCB_02030 3e-24 K Conserved phage C-terminus (Phg_2220_C)
MDLDOOCB_02032 1.4e-47 S Protein of unknown function (DUF1351)
MDLDOOCB_02036 1.7e-07 K DNA-binding helix-turn-helix protein
MDLDOOCB_02037 7.9e-09
MDLDOOCB_02039 1.2e-23 S Domain of unknown function (DUF771)
MDLDOOCB_02040 2.4e-15 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_02041 4.5e-18 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_02044 4.5e-152 L Belongs to the 'phage' integrase family
MDLDOOCB_02047 3e-112 L PFAM transposase IS116 IS110 IS902
MDLDOOCB_02048 4e-33 3.5.1.28 NU amidase activity
MDLDOOCB_02049 1.3e-157 trsE S COG0433 Predicted ATPase
MDLDOOCB_02050 8.4e-15
MDLDOOCB_02052 3e-32 I mechanosensitive ion channel activity
MDLDOOCB_02053 3.4e-140 U TraM recognition site of TraD and TraG
MDLDOOCB_02057 6.6e-38 M domain protein
MDLDOOCB_02058 1.6e-42 M domain protein
MDLDOOCB_02060 6.5e-25 srtA 3.4.22.70 M sortase family
MDLDOOCB_02061 2.3e-24 S SLAP domain
MDLDOOCB_02065 2.6e-11 ssb L Single-strand binding protein family
MDLDOOCB_02073 3.2e-24 S Domain of unknown function (DUF771)
MDLDOOCB_02074 8.9e-32 K Helix-turn-helix domain
MDLDOOCB_02075 1.2e-21 XK27_07105 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_02076 1.2e-23 K Helix-turn-helix domain
MDLDOOCB_02077 5e-08 S Pfam:DUF955
MDLDOOCB_02078 1.4e-153 L Belongs to the 'phage' integrase family
MDLDOOCB_02081 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MDLDOOCB_02082 1.9e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
MDLDOOCB_02083 1.6e-21
MDLDOOCB_02084 3.8e-77 comGF U Putative Competence protein ComGF
MDLDOOCB_02085 2.3e-41
MDLDOOCB_02086 1.8e-69
MDLDOOCB_02087 3.1e-43 comGC U competence protein ComGC
MDLDOOCB_02088 1.7e-171 comGB NU type II secretion system
MDLDOOCB_02089 1.7e-179 comGA NU Type II IV secretion system protein
MDLDOOCB_02090 8.9e-133 yebC K Transcriptional regulatory protein
MDLDOOCB_02091 7.6e-94 S VanZ like family
MDLDOOCB_02092 3.5e-101 ylbE GM NAD(P)H-binding
MDLDOOCB_02093 3.7e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MDLDOOCB_02095 3.8e-160 L hmm pf00665
MDLDOOCB_02096 5.8e-100 L Helix-turn-helix domain
MDLDOOCB_02097 2e-310 E Amino acid permease
MDLDOOCB_02099 8.8e-82 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
MDLDOOCB_02100 2.2e-90 2.7.7.65 T GGDEF domain
MDLDOOCB_02101 8.2e-36
MDLDOOCB_02102 3.9e-43 ica2 GT2 M Glycosyl transferase family group 2
MDLDOOCB_02103 2e-56 ica2 GT2 M Glycosyl transferase family group 2
MDLDOOCB_02104 2e-33 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
MDLDOOCB_02105 1e-149 D Alpha beta
MDLDOOCB_02106 2e-290 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
MDLDOOCB_02107 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
MDLDOOCB_02108 8.3e-143 licT K CAT RNA binding domain
MDLDOOCB_02109 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
MDLDOOCB_02110 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MDLDOOCB_02111 1.6e-118
MDLDOOCB_02112 1.8e-75 K Penicillinase repressor
MDLDOOCB_02113 1.4e-147 S hydrolase
MDLDOOCB_02114 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MDLDOOCB_02115 2e-172 ybbR S YbbR-like protein
MDLDOOCB_02116 1.9e-150 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
MDLDOOCB_02117 7.3e-208 potD P ABC transporter
MDLDOOCB_02118 4.8e-127 potC P ABC transporter permease
MDLDOOCB_02119 1.3e-129 potB P ABC transporter permease
MDLDOOCB_02120 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
MDLDOOCB_02121 2e-163 murB 1.3.1.98 M Cell wall formation
MDLDOOCB_02122 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
MDLDOOCB_02123 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
MDLDOOCB_02124 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
MDLDOOCB_02125 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
MDLDOOCB_02126 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
MDLDOOCB_02127 1.2e-94
MDLDOOCB_02128 6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
MDLDOOCB_02129 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
MDLDOOCB_02130 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
MDLDOOCB_02131 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
MDLDOOCB_02132 3.3e-189 cggR K Putative sugar-binding domain
MDLDOOCB_02134 8.5e-156
MDLDOOCB_02135 9e-113
MDLDOOCB_02136 4.6e-274 ycaM E amino acid
MDLDOOCB_02137 3.1e-139 S Cysteine-rich secretory protein family
MDLDOOCB_02138 4.2e-77 K MerR HTH family regulatory protein
MDLDOOCB_02139 1.4e-262 lmrB EGP Major facilitator Superfamily
MDLDOOCB_02140 3.1e-48 S Domain of unknown function (DUF4811)
MDLDOOCB_02141 1.1e-163 L An automated process has identified a potential problem with this gene model
MDLDOOCB_02142 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
MDLDOOCB_02143 3.1e-84 ybbL S ABC transporter, ATP-binding protein
MDLDOOCB_02144 1.4e-16 ybbL S ABC transporter, ATP-binding protein
MDLDOOCB_02145 0.0 S SH3-like domain
MDLDOOCB_02146 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
MDLDOOCB_02147 2.1e-171 whiA K May be required for sporulation
MDLDOOCB_02148 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
MDLDOOCB_02149 6.2e-165 rapZ S Displays ATPase and GTPase activities
MDLDOOCB_02150 4.1e-90 S Short repeat of unknown function (DUF308)
MDLDOOCB_02151 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
MDLDOOCB_02152 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
MDLDOOCB_02153 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
MDLDOOCB_02154 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
MDLDOOCB_02155 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
MDLDOOCB_02156 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
MDLDOOCB_02157 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
MDLDOOCB_02158 5.1e-17
MDLDOOCB_02159 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
MDLDOOCB_02160 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
MDLDOOCB_02161 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
MDLDOOCB_02162 9.4e-132 comFC S Competence protein
MDLDOOCB_02163 4.7e-246 comFA L Helicase C-terminal domain protein
MDLDOOCB_02164 5.1e-119 yvyE 3.4.13.9 S YigZ family
MDLDOOCB_02165 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
MDLDOOCB_02166 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
MDLDOOCB_02167 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
MDLDOOCB_02168 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
MDLDOOCB_02169 2.1e-95 ymfM S Helix-turn-helix domain
MDLDOOCB_02170 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
MDLDOOCB_02171 1.9e-236 S Peptidase M16
MDLDOOCB_02172 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
MDLDOOCB_02173 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
MDLDOOCB_02174 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
MDLDOOCB_02175 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
MDLDOOCB_02176 2.6e-214 yubA S AI-2E family transporter
MDLDOOCB_02177 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
MDLDOOCB_02178 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
MDLDOOCB_02179 3e-112 L PFAM transposase IS116 IS110 IS902
MDLDOOCB_02180 4.2e-92 S SNARE associated Golgi protein
MDLDOOCB_02181 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
MDLDOOCB_02182 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
MDLDOOCB_02183 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MDLDOOCB_02184 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
MDLDOOCB_02185 5.2e-110 yjbK S CYTH
MDLDOOCB_02186 4.6e-114 yjbH Q Thioredoxin
MDLDOOCB_02187 4e-13 coiA 3.6.4.12 S Competence protein
MDLDOOCB_02188 3.3e-122 coiA 3.6.4.12 S Competence protein
MDLDOOCB_02189 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
MDLDOOCB_02190 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
MDLDOOCB_02191 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MDLDOOCB_02192 8.5e-41 ptsH G phosphocarrier protein HPR
MDLDOOCB_02193 0.0 clpE O Belongs to the ClpA ClpB family
MDLDOOCB_02194 8.7e-44 XK27_09445 S Domain of unknown function (DUF1827)
MDLDOOCB_02195 2.1e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
MDLDOOCB_02196 1.2e-141 hlyX S Transporter associated domain
MDLDOOCB_02197 1.1e-163 L An automated process has identified a potential problem with this gene model
MDLDOOCB_02198 1.6e-74
MDLDOOCB_02199 7.8e-85
MDLDOOCB_02200 3e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
MDLDOOCB_02201 1.2e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MDLDOOCB_02202 2.2e-119 D Alpha beta
MDLDOOCB_02203 2.9e-27 D Alpha beta
MDLDOOCB_02204 1e-44
MDLDOOCB_02205 1.2e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
MDLDOOCB_02206 5.9e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
MDLDOOCB_02207 5.6e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
MDLDOOCB_02208 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
MDLDOOCB_02209 8e-163 yihY S Belongs to the UPF0761 family
MDLDOOCB_02210 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
MDLDOOCB_02211 4.1e-80 fld C Flavodoxin
MDLDOOCB_02212 3.1e-87 gtcA S Teichoic acid glycosylation protein
MDLDOOCB_02213 6.8e-235 L Transposase DDE domain
MDLDOOCB_02214 5.9e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
MDLDOOCB_02216 1.8e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
MDLDOOCB_02217 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
MDLDOOCB_02218 1.1e-130 M Glycosyl hydrolases family 25
MDLDOOCB_02219 2.8e-230 potE E amino acid
MDLDOOCB_02220 0.0 1.3.5.4 C FAD binding domain
MDLDOOCB_02221 1.2e-49 L PFAM transposase, IS4 family protein
MDLDOOCB_02222 1.1e-87 L PFAM transposase, IS4 family protein
MDLDOOCB_02223 1.9e-186 1.3.5.4 C FAD binding domain
MDLDOOCB_02224 2e-130 1.3.5.4 C FAD binding domain
MDLDOOCB_02225 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
MDLDOOCB_02226 1.7e-249 yhdP S Transporter associated domain
MDLDOOCB_02227 1.1e-118 C nitroreductase
MDLDOOCB_02228 2.1e-39
MDLDOOCB_02229 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
MDLDOOCB_02230 1.6e-80
MDLDOOCB_02231 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
MDLDOOCB_02232 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
MDLDOOCB_02233 7.8e-146 S hydrolase
MDLDOOCB_02234 2e-160 rssA S Phospholipase, patatin family
MDLDOOCB_02235 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
MDLDOOCB_02236 3.1e-136 glcR K DeoR C terminal sensor domain
MDLDOOCB_02237 2.5e-59 S Enterocin A Immunity
MDLDOOCB_02238 1e-153 S hydrolase
MDLDOOCB_02239 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
MDLDOOCB_02240 9.1e-175 rihB 3.2.2.1 F Nucleoside
MDLDOOCB_02241 0.0 kup P Transport of potassium into the cell
MDLDOOCB_02242 3.4e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
MDLDOOCB_02243 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MDLDOOCB_02244 1.3e-161 2.7.7.12 C Domain of unknown function (DUF4931)
MDLDOOCB_02245 1.3e-235 G Bacterial extracellular solute-binding protein
MDLDOOCB_02246 2e-210 S Uncharacterized protein conserved in bacteria (DUF2325)
MDLDOOCB_02247 3.2e-14
MDLDOOCB_02248 2.9e-148 K Helix-turn-helix domain
MDLDOOCB_02249 5.4e-121 S Alpha/beta hydrolase family
MDLDOOCB_02250 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
MDLDOOCB_02251 6.8e-235 L Transposase DDE domain
MDLDOOCB_02252 5.9e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
MDLDOOCB_02254 1.8e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
MDLDOOCB_02255 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
MDLDOOCB_02256 1.1e-130 M Glycosyl hydrolases family 25
MDLDOOCB_02257 2.8e-230 potE E amino acid
MDLDOOCB_02258 0.0 1.3.5.4 C FAD binding domain
MDLDOOCB_02260 1.6e-85
MDLDOOCB_02261 6.1e-227 L COG3547 Transposase and inactivated derivatives
MDLDOOCB_02262 1.1e-164 S Protein of unknown function (DUF2974)
MDLDOOCB_02263 6.8e-108 glnP P ABC transporter permease
MDLDOOCB_02264 9.7e-91 gluC P ABC transporter permease
MDLDOOCB_02265 3.4e-149 glnH ET ABC transporter substrate-binding protein
MDLDOOCB_02266 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
MDLDOOCB_02267 4.7e-114 udk 2.7.1.48 F Zeta toxin
MDLDOOCB_02268 2.3e-151 G MFS/sugar transport protein
MDLDOOCB_02269 4.7e-85 G MFS/sugar transport protein
MDLDOOCB_02270 8.4e-102 S ABC-type cobalt transport system, permease component
MDLDOOCB_02271 0.0 V ABC transporter transmembrane region
MDLDOOCB_02272 1.5e-308 XK27_09600 V ABC transporter, ATP-binding protein
MDLDOOCB_02273 1.4e-80 K Transcriptional regulator, MarR family
MDLDOOCB_02274 1.9e-147 glnH ET ABC transporter
MDLDOOCB_02275 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
MDLDOOCB_02276 8.6e-243 steT E amino acid
MDLDOOCB_02277 9.8e-239 steT E amino acid
MDLDOOCB_02278 2.5e-138
MDLDOOCB_02279 5.9e-174 S Aldo keto reductase
MDLDOOCB_02280 2.2e-311 ybiT S ABC transporter, ATP-binding protein
MDLDOOCB_02281 1.7e-209 pepA E M42 glutamyl aminopeptidase
MDLDOOCB_02282 1.9e-43
MDLDOOCB_02283 6.9e-136
MDLDOOCB_02284 1.1e-217 mdtG EGP Major facilitator Superfamily
MDLDOOCB_02285 7.8e-261 emrY EGP Major facilitator Superfamily
MDLDOOCB_02286 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
MDLDOOCB_02287 2.9e-238 pyrP F Permease
MDLDOOCB_02288 2.9e-287 K Putative DNA-binding domain
MDLDOOCB_02289 2e-29
MDLDOOCB_02290 7.8e-157 S reductase
MDLDOOCB_02291 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
MDLDOOCB_02292 3.7e-206 L COG2963 Transposase and inactivated derivatives
MDLDOOCB_02293 0.0 4.2.1.53 S Myosin-crossreactive antigen
MDLDOOCB_02294 2.3e-90 yxdD K Bacterial regulatory proteins, tetR family
MDLDOOCB_02295 9.5e-259 emrY EGP Major facilitator Superfamily
MDLDOOCB_02300 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
MDLDOOCB_02301 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MDLDOOCB_02302 2.6e-108 pbpX V Beta-lactamase
MDLDOOCB_02303 2.4e-67 pbpX V Beta-lactamase
MDLDOOCB_02304 1.3e-230 nhaC C Na H antiporter NhaC
MDLDOOCB_02305 4.5e-50
MDLDOOCB_02306 1.2e-105 ybhL S Belongs to the BI1 family
MDLDOOCB_02307 2.9e-66 K transcriptional regulator
MDLDOOCB_02308 7.2e-18
MDLDOOCB_02309 2.7e-171 yegS 2.7.1.107 G Lipid kinase
MDLDOOCB_02310 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MDLDOOCB_02311 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
MDLDOOCB_02312 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MDLDOOCB_02313 5.8e-203 camS S sex pheromone
MDLDOOCB_02314 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
MDLDOOCB_02315 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
MDLDOOCB_02316 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
MDLDOOCB_02318 4.8e-84 ydcK S Belongs to the SprT family
MDLDOOCB_02319 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
MDLDOOCB_02320 3e-257 epsU S Polysaccharide biosynthesis protein
MDLDOOCB_02321 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
MDLDOOCB_02322 0.0 pacL 3.6.3.8 P P-type ATPase
MDLDOOCB_02323 1.3e-202 tnpB L Putative transposase DNA-binding domain
MDLDOOCB_02324 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
MDLDOOCB_02325 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
MDLDOOCB_02326 2.9e-204 csaB M Glycosyl transferases group 1
MDLDOOCB_02327 1.2e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
MDLDOOCB_02328 3.8e-196 S Uncharacterised protein family (UPF0236)
MDLDOOCB_02329 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
MDLDOOCB_02330 4.6e-123 gntR1 K UTRA
MDLDOOCB_02331 2.5e-179
MDLDOOCB_02332 1.9e-300 oppA2 E ABC transporter, substratebinding protein
MDLDOOCB_02335 9.2e-240 npr 1.11.1.1 C NADH oxidase
MDLDOOCB_02336 7.7e-12
MDLDOOCB_02337 3.7e-22 3.6.4.12 S transposase or invertase
MDLDOOCB_02338 1.5e-227 slpX S SLAP domain
MDLDOOCB_02339 4.4e-144 K SIS domain
MDLDOOCB_02340 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
MDLDOOCB_02341 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
MDLDOOCB_02342 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
MDLDOOCB_02343 5.8e-100 L Helix-turn-helix domain
MDLDOOCB_02344 3.8e-160 L hmm pf00665
MDLDOOCB_02345 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
MDLDOOCB_02347 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
MDLDOOCB_02348 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
MDLDOOCB_02349 2.6e-89 G Histidine phosphatase superfamily (branch 1)
MDLDOOCB_02350 1.2e-105 G Phosphoglycerate mutase family
MDLDOOCB_02351 4.7e-159 D nuclear chromosome segregation
MDLDOOCB_02352 5.8e-78 M LysM domain protein
MDLDOOCB_02353 3.8e-160 L hmm pf00665
MDLDOOCB_02354 5.8e-100 L Helix-turn-helix domain
MDLDOOCB_02355 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
MDLDOOCB_02356 1.8e-125 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
MDLDOOCB_02357 6.2e-12
MDLDOOCB_02358 2.3e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
MDLDOOCB_02359 2.3e-30
MDLDOOCB_02361 2.9e-69 S Iron-sulphur cluster biosynthesis
MDLDOOCB_02362 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
MDLDOOCB_02363 6.2e-59 psiE S Phosphate-starvation-inducible E
MDLDOOCB_02365 1e-63 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
MDLDOOCB_02366 7.8e-45 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
MDLDOOCB_02367 1.6e-227 amtB P ammonium transporter
MDLDOOCB_02368 1.4e-60
MDLDOOCB_02369 0.0 lhr L DEAD DEAH box helicase
MDLDOOCB_02370 3.5e-244 P P-loop Domain of unknown function (DUF2791)
MDLDOOCB_02371 0.0 S TerB-C domain
MDLDOOCB_02372 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
MDLDOOCB_02373 3.9e-298 V ABC transporter transmembrane region
MDLDOOCB_02374 2.3e-156 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_02375 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
MDLDOOCB_02376 2.1e-32
MDLDOOCB_02377 1.4e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
MDLDOOCB_02378 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
MDLDOOCB_02379 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
MDLDOOCB_02380 1e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
MDLDOOCB_02381 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
MDLDOOCB_02382 4.2e-278 mtlR K Mga helix-turn-helix domain
MDLDOOCB_02383 5.4e-90 mtlR K Mga helix-turn-helix domain
MDLDOOCB_02384 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
MDLDOOCB_02385 1.8e-237 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
MDLDOOCB_02386 2.6e-258 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
MDLDOOCB_02387 8e-244 cycA E Amino acid permease
MDLDOOCB_02388 7e-66 maa S transferase hexapeptide repeat
MDLDOOCB_02389 3.3e-158 K Transcriptional regulator
MDLDOOCB_02390 1.1e-62 manO S Domain of unknown function (DUF956)
MDLDOOCB_02391 1e-173 manN G system, mannose fructose sorbose family IID component
MDLDOOCB_02392 1.7e-129 manY G PTS system
MDLDOOCB_02393 2.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
MDLDOOCB_02395 2.7e-27 EGP Major Facilitator Superfamily
MDLDOOCB_02397 9.7e-60
MDLDOOCB_02398 2.4e-99 L An automated process has identified a potential problem with this gene model
MDLDOOCB_02399 6.6e-134 UW LPXTG-motif cell wall anchor domain protein
MDLDOOCB_02400 4.6e-195 UW LPXTG-motif cell wall anchor domain protein
MDLDOOCB_02401 9.6e-45 UW LPXTG-motif cell wall anchor domain protein
MDLDOOCB_02402 7.8e-26 UW LPXTG-motif cell wall anchor domain protein
MDLDOOCB_02403 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
MDLDOOCB_02404 1.7e-99 J Acetyltransferase (GNAT) domain
MDLDOOCB_02405 3.9e-110 yjbF S SNARE associated Golgi protein
MDLDOOCB_02406 1.3e-150 I alpha/beta hydrolase fold
MDLDOOCB_02407 1.5e-155 hipB K Helix-turn-helix
MDLDOOCB_02408 2.6e-83 F Nucleoside 2-deoxyribosyltransferase
MDLDOOCB_02409 6.8e-259 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
MDLDOOCB_02410 9.4e-147
MDLDOOCB_02411 0.0 ydgH S MMPL family
MDLDOOCB_02412 2.3e-99 yobS K Bacterial regulatory proteins, tetR family
MDLDOOCB_02413 9.7e-148 3.5.2.6 V Beta-lactamase enzyme family
MDLDOOCB_02414 8.8e-154 corA P CorA-like Mg2+ transporter protein
MDLDOOCB_02415 6.7e-240 G Bacterial extracellular solute-binding protein
MDLDOOCB_02416 9.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
MDLDOOCB_02417 1.8e-145 gtsC P Binding-protein-dependent transport system inner membrane component
MDLDOOCB_02418 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
MDLDOOCB_02419 1.9e-203 malK P ATPases associated with a variety of cellular activities
MDLDOOCB_02420 1.3e-281 pipD E Dipeptidase
MDLDOOCB_02421 1.9e-158 endA F DNA RNA non-specific endonuclease
MDLDOOCB_02422 1e-181 dnaQ 2.7.7.7 L EXOIII
MDLDOOCB_02423 2.4e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
MDLDOOCB_02424 3e-116 yviA S Protein of unknown function (DUF421)
MDLDOOCB_02425 1.1e-56 S Protein of unknown function (DUF3290)
MDLDOOCB_02427 3.8e-139 pnuC H nicotinamide mononucleotide transporter
MDLDOOCB_02428 1.3e-51
MDLDOOCB_02429 2.7e-57
MDLDOOCB_02430 1.6e-11
MDLDOOCB_02431 1.5e-124 S PAS domain
MDLDOOCB_02432 1.1e-163 L An automated process has identified a potential problem with this gene model
MDLDOOCB_02433 2.9e-277 V ABC transporter transmembrane region
MDLDOOCB_02434 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
MDLDOOCB_02435 3.1e-130 T Transcriptional regulatory protein, C terminal
MDLDOOCB_02436 5.2e-187 T GHKL domain
MDLDOOCB_02437 5.8e-76 S Peptidase propeptide and YPEB domain
MDLDOOCB_02438 2.5e-72 S Peptidase propeptide and YPEB domain
MDLDOOCB_02439 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
MDLDOOCB_02440 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
MDLDOOCB_02441 7e-68 V ABC transporter transmembrane region
MDLDOOCB_02442 9e-161 V ABC transporter transmembrane region
MDLDOOCB_02443 2.7e-155 L Transposase
MDLDOOCB_02444 2.3e-309 oppA3 E ABC transporter, substratebinding protein
MDLDOOCB_02445 2.4e-60 ypaA S Protein of unknown function (DUF1304)
MDLDOOCB_02446 2.1e-28 S Peptidase propeptide and YPEB domain
MDLDOOCB_02447 3.5e-236 L transposase, IS605 OrfB family
MDLDOOCB_02448 6.3e-60 ypaA S Protein of unknown function (DUF1304)
MDLDOOCB_02449 2.1e-28 S Peptidase propeptide and YPEB domain
MDLDOOCB_02450 3.5e-236 L transposase, IS605 OrfB family
MDLDOOCB_02451 3e-112 L PFAM transposase IS116 IS110 IS902
MDLDOOCB_02452 8.8e-58 S Peptidase propeptide and YPEB domain
MDLDOOCB_02453 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
MDLDOOCB_02454 7.4e-169 coaA 2.7.1.33 F Pantothenic acid kinase
MDLDOOCB_02455 7.1e-98 E GDSL-like Lipase/Acylhydrolase
MDLDOOCB_02456 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
MDLDOOCB_02457 1.6e-143 aatB ET ABC transporter substrate-binding protein
MDLDOOCB_02458 1e-105 glnQ 3.6.3.21 E ABC transporter
MDLDOOCB_02459 1.5e-107 glnP P ABC transporter permease
MDLDOOCB_02460 0.0 helD 3.6.4.12 L DNA helicase
MDLDOOCB_02461 2.3e-116 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
MDLDOOCB_02462 1.4e-126 pgm3 G Phosphoglycerate mutase family
MDLDOOCB_02463 1.2e-241 S response to antibiotic
MDLDOOCB_02464 3.2e-124
MDLDOOCB_02465 0.0 3.6.3.8 P P-type ATPase
MDLDOOCB_02466 8.7e-66 2.7.1.191 G PTS system fructose IIA component
MDLDOOCB_02467 4.4e-43
MDLDOOCB_02468 5.9e-09
MDLDOOCB_02469 9.4e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
MDLDOOCB_02470 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
MDLDOOCB_02471 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
MDLDOOCB_02472 1.5e-152
MDLDOOCB_02473 5.3e-212 L Transposase
MDLDOOCB_02474 3e-24
MDLDOOCB_02475 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
MDLDOOCB_02476 1.8e-104 3.2.2.20 K acetyltransferase
MDLDOOCB_02478 4.3e-226 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
MDLDOOCB_02479 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
MDLDOOCB_02480 2.2e-101 K Helix-turn-helix domain, rpiR family
MDLDOOCB_02481 6.2e-106 L Transposase
MDLDOOCB_02483 1.5e-215 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MDLDOOCB_02484 3.5e-175 S Cysteine-rich secretory protein family
MDLDOOCB_02485 3.5e-41
MDLDOOCB_02486 2.6e-118 M NlpC/P60 family
MDLDOOCB_02487 1.4e-136 M NlpC P60 family protein
MDLDOOCB_02488 2e-89 M NlpC/P60 family
MDLDOOCB_02489 7.7e-89 gmk2 2.7.4.8 F Guanylate kinase homologues.
MDLDOOCB_02490 3.9e-42
MDLDOOCB_02491 6.5e-279 S O-antigen ligase like membrane protein
MDLDOOCB_02492 3.3e-112
MDLDOOCB_02493 1.1e-222 tnpB L Putative transposase DNA-binding domain
MDLDOOCB_02494 2.6e-29 nrdI F NrdI Flavodoxin like
MDLDOOCB_02495 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MDLDOOCB_02496 2.5e-68
MDLDOOCB_02497 9.1e-112 yvpB S Peptidase_C39 like family
MDLDOOCB_02498 1.1e-83 S Threonine/Serine exporter, ThrE
MDLDOOCB_02499 2.4e-136 thrE S Putative threonine/serine exporter
MDLDOOCB_02500 8.9e-292 S ABC transporter
MDLDOOCB_02501 8.3e-58
MDLDOOCB_02502 2.2e-102 rimL J Acetyltransferase (GNAT) domain
MDLDOOCB_02503 5.6e-19
MDLDOOCB_02504 6.5e-125 S Protein of unknown function (DUF554)
MDLDOOCB_02505 2.2e-208 brpA K Cell envelope-like function transcriptional attenuator common domain protein
MDLDOOCB_02506 0.0 pepF E oligoendopeptidase F
MDLDOOCB_02507 7.4e-40 S Enterocin A Immunity
MDLDOOCB_02508 3e-134 S CAAX amino terminal protease
MDLDOOCB_02512 5e-47 2.4.1.33 V HlyD family secretion protein
MDLDOOCB_02513 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
MDLDOOCB_02514 2.9e-79 K LytTr DNA-binding domain
MDLDOOCB_02515 1.4e-78 2.7.13.3 T GHKL domain
MDLDOOCB_02518 2e-25 K Helix-turn-helix XRE-family like proteins
MDLDOOCB_02519 1.2e-11
MDLDOOCB_02521 5.4e-214 2.1.1.14 E methionine synthase, vitamin-B12 independent
MDLDOOCB_02522 1.8e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
MDLDOOCB_02523 1.1e-08 S CAAX amino terminal protease
MDLDOOCB_02524 6.5e-85 L Transposase
MDLDOOCB_02525 3e-72 L Transposase
MDLDOOCB_02527 2.4e-182 L DDE superfamily endonuclease
MDLDOOCB_02529 1.7e-28 mloB K Putative ATP-dependent DNA helicase recG C-terminal
MDLDOOCB_02530 1.5e-246 lctP C L-lactate permease

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)