ORF_ID e_value Gene_name EC_number CAZy COGs Description
AAPAMFAE_00001 6.1e-26 S CAAX protease self-immunity
AAPAMFAE_00002 1.5e-127 K helix_turn_helix, mercury resistance
AAPAMFAE_00003 3e-232 pbuG S permease
AAPAMFAE_00004 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
AAPAMFAE_00005 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
AAPAMFAE_00006 5.4e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
AAPAMFAE_00007 1.4e-41 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
AAPAMFAE_00008 1.2e-93 K Transcriptional regulator
AAPAMFAE_00009 5.6e-62 K Transcriptional regulator
AAPAMFAE_00010 4e-226 S cog cog1373
AAPAMFAE_00011 2.8e-145 S haloacid dehalogenase-like hydrolase
AAPAMFAE_00012 2.9e-227 pbuG S permease
AAPAMFAE_00013 7.4e-74 atkY K Penicillinase repressor
AAPAMFAE_00014 1e-63 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
AAPAMFAE_00015 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
AAPAMFAE_00016 0.0 copA 3.6.3.54 P P-type ATPase
AAPAMFAE_00017 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
AAPAMFAE_00018 1.2e-105
AAPAMFAE_00019 2.2e-246 EGP Sugar (and other) transporter
AAPAMFAE_00020 1.2e-18
AAPAMFAE_00021 6.6e-212
AAPAMFAE_00022 1.5e-82 L An automated process has identified a potential problem with this gene model
AAPAMFAE_00023 1.7e-42 rhaS6 K helix_turn_helix, arabinose operon control protein
AAPAMFAE_00024 2.6e-129 GK ROK family
AAPAMFAE_00025 3.5e-199 V MatE
AAPAMFAE_00026 3.3e-242 yisQ V MatE
AAPAMFAE_00027 4.1e-137 L An automated process has identified a potential problem with this gene model
AAPAMFAE_00028 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
AAPAMFAE_00029 4e-32 E Zn peptidase
AAPAMFAE_00030 6.7e-287 clcA P chloride
AAPAMFAE_00031 2.1e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AAPAMFAE_00032 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
AAPAMFAE_00033 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
AAPAMFAE_00034 1.4e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AAPAMFAE_00035 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AAPAMFAE_00036 2.3e-60 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
AAPAMFAE_00037 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
AAPAMFAE_00038 5.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AAPAMFAE_00039 1.1e-182 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
AAPAMFAE_00040 2.6e-35 yaaA S S4 domain protein YaaA
AAPAMFAE_00041 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AAPAMFAE_00042 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AAPAMFAE_00043 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AAPAMFAE_00044 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
AAPAMFAE_00045 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
AAPAMFAE_00046 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AAPAMFAE_00047 1.4e-91 E Zn peptidase
AAPAMFAE_00048 1.3e-170 S Bacteriocin helveticin-J
AAPAMFAE_00049 1.8e-201 S SLAP domain
AAPAMFAE_00050 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
AAPAMFAE_00051 5.7e-69 rplI J Binds to the 23S rRNA
AAPAMFAE_00052 1.9e-253 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
AAPAMFAE_00053 3.5e-166 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
AAPAMFAE_00054 5e-165 degV S DegV family
AAPAMFAE_00055 1.2e-168 scrK 2.7.1.2, 2.7.1.4 GK ROK family
AAPAMFAE_00057 2.4e-16
AAPAMFAE_00058 3.5e-230 I Protein of unknown function (DUF2974)
AAPAMFAE_00059 5.8e-121 yhiD S MgtC family
AAPAMFAE_00061 6.8e-30
AAPAMFAE_00062 1.4e-06 S LPXTG cell wall anchor motif
AAPAMFAE_00063 2.6e-146 S Putative ABC-transporter type IV
AAPAMFAE_00064 6.7e-80 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
AAPAMFAE_00065 1.4e-53 S ECF transporter, substrate-specific component
AAPAMFAE_00066 2.7e-24 S Domain of unknown function (DUF4430)
AAPAMFAE_00067 4.7e-43 S Domain of unknown function (DUF4430)
AAPAMFAE_00068 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
AAPAMFAE_00069 0.0 oppA E ABC transporter substrate-binding protein
AAPAMFAE_00070 1.9e-176 K AI-2E family transporter
AAPAMFAE_00071 3.1e-104 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
AAPAMFAE_00072 1.5e-17
AAPAMFAE_00073 5.2e-248 G Major Facilitator
AAPAMFAE_00074 6.9e-136 XK27_08845 S ABC transporter, ATP-binding protein
AAPAMFAE_00075 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
AAPAMFAE_00076 2e-175 ABC-SBP S ABC transporter
AAPAMFAE_00077 7.1e-135 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
AAPAMFAE_00078 5.5e-87
AAPAMFAE_00079 2.7e-74 M LysM domain
AAPAMFAE_00081 4.6e-83
AAPAMFAE_00083 5.6e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
AAPAMFAE_00084 1.7e-129 manY G PTS system
AAPAMFAE_00085 1e-173 manN G system, mannose fructose sorbose family IID component
AAPAMFAE_00086 1.7e-63 manO S Domain of unknown function (DUF956)
AAPAMFAE_00087 4.3e-158 K Transcriptional regulator
AAPAMFAE_00088 1.1e-84 maa S transferase hexapeptide repeat
AAPAMFAE_00089 5.6e-245 cycA E Amino acid permease
AAPAMFAE_00090 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
AAPAMFAE_00091 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
AAPAMFAE_00092 0.0 mtlR K Mga helix-turn-helix domain
AAPAMFAE_00093 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
AAPAMFAE_00094 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AAPAMFAE_00095 1.1e-220 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
AAPAMFAE_00096 1.4e-133 4.1.1.44 S Carboxymuconolactone decarboxylase family
AAPAMFAE_00097 1.6e-32
AAPAMFAE_00098 1.2e-70 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
AAPAMFAE_00099 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
AAPAMFAE_00100 0.0 S TerB-C domain
AAPAMFAE_00101 3.5e-252 P P-loop Domain of unknown function (DUF2791)
AAPAMFAE_00102 0.0 lhr L DEAD DEAH box helicase
AAPAMFAE_00103 1.9e-59
AAPAMFAE_00104 4.9e-140 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
AAPAMFAE_00105 2e-201 amtB P ammonium transporter
AAPAMFAE_00107 1e-61 psiE S Phosphate-starvation-inducible E
AAPAMFAE_00108 3.8e-113 yncA 2.3.1.79 S Maltose acetyltransferase
AAPAMFAE_00109 1.5e-70 S Iron-sulphur cluster biosynthesis
AAPAMFAE_00111 2.3e-30
AAPAMFAE_00112 3.6e-173 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
AAPAMFAE_00113 6.2e-12
AAPAMFAE_00114 9.6e-115 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AAPAMFAE_00115 6.8e-79 M LysM domain protein
AAPAMFAE_00116 3.3e-160 D nuclear chromosome segregation
AAPAMFAE_00117 1.2e-105 G Phosphoglycerate mutase family
AAPAMFAE_00118 2.2e-88 G Histidine phosphatase superfamily (branch 1)
AAPAMFAE_00119 1.1e-113 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
AAPAMFAE_00120 1.9e-113 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
AAPAMFAE_00122 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
AAPAMFAE_00123 3.1e-212 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
AAPAMFAE_00124 1.2e-180 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
AAPAMFAE_00125 1.7e-122 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AAPAMFAE_00126 1.3e-143 K SIS domain
AAPAMFAE_00127 8.1e-218 slpX S SLAP domain
AAPAMFAE_00129 2.5e-245 npr 1.11.1.1 C NADH oxidase
AAPAMFAE_00132 6e-299 oppA2 E ABC transporter, substratebinding protein
AAPAMFAE_00133 1.9e-179
AAPAMFAE_00134 4.6e-123 gntR1 K UTRA
AAPAMFAE_00135 1.5e-70 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
AAPAMFAE_00136 4.3e-135 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
AAPAMFAE_00137 3.4e-205 csaB M Glycosyl transferases group 1
AAPAMFAE_00138 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AAPAMFAE_00139 4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
AAPAMFAE_00140 0.0 pacL 3.6.3.8 P P-type ATPase
AAPAMFAE_00141 2e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
AAPAMFAE_00142 1.9e-259 epsU S Polysaccharide biosynthesis protein
AAPAMFAE_00143 9.1e-135 M Glycosyltransferase sugar-binding region containing DXD motif
AAPAMFAE_00144 6.9e-83 ydcK S Belongs to the SprT family
AAPAMFAE_00146 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
AAPAMFAE_00147 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
AAPAMFAE_00148 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AAPAMFAE_00149 5.8e-203 camS S sex pheromone
AAPAMFAE_00150 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AAPAMFAE_00151 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
AAPAMFAE_00152 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AAPAMFAE_00153 7.2e-172 yegS 2.7.1.107 G Lipid kinase
AAPAMFAE_00154 4.3e-108 ybhL S Belongs to the BI1 family
AAPAMFAE_00155 1.3e-221 L Transposase
AAPAMFAE_00156 2.2e-273 S Archaea bacterial proteins of unknown function
AAPAMFAE_00157 8e-90 ntd 2.4.2.6 F Nucleoside
AAPAMFAE_00158 1e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AAPAMFAE_00159 2.6e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
AAPAMFAE_00160 3.2e-86 uspA T universal stress protein
AAPAMFAE_00162 1.8e-162 phnD P Phosphonate ABC transporter
AAPAMFAE_00163 4e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AAPAMFAE_00164 2.9e-121 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
AAPAMFAE_00165 2.4e-147 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
AAPAMFAE_00166 3.3e-106 tag 3.2.2.20 L glycosylase
AAPAMFAE_00167 1.5e-83
AAPAMFAE_00168 1.7e-273 S Calcineurin-like phosphoesterase
AAPAMFAE_00169 0.0 asnB 6.3.5.4 E Asparagine synthase
AAPAMFAE_00170 2.8e-254 yxbA 6.3.1.12 S ATP-grasp enzyme
AAPAMFAE_00171 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
AAPAMFAE_00172 2.5e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AAPAMFAE_00173 8e-103 S Iron-sulfur cluster assembly protein
AAPAMFAE_00174 4.9e-229 XK27_04775 S PAS domain
AAPAMFAE_00175 1.4e-210 yttB EGP Major facilitator Superfamily
AAPAMFAE_00176 0.0 pepO 3.4.24.71 O Peptidase family M13
AAPAMFAE_00177 0.0 kup P Transport of potassium into the cell
AAPAMFAE_00178 9.5e-74
AAPAMFAE_00179 2.7e-67 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AAPAMFAE_00180 3.3e-59 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
AAPAMFAE_00181 5.9e-45
AAPAMFAE_00183 5.5e-30
AAPAMFAE_00184 2.8e-39 S Protein of unknown function (DUF2922)
AAPAMFAE_00185 6.5e-110 S SLAP domain
AAPAMFAE_00186 7.6e-140 L Transposase and inactivated derivatives, IS30 family
AAPAMFAE_00187 2.6e-175 msmX P Belongs to the ABC transporter superfamily
AAPAMFAE_00189 6e-72 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
AAPAMFAE_00190 8.4e-66 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
AAPAMFAE_00191 2.7e-35 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AAPAMFAE_00192 2.3e-31 L An automated process has identified a potential problem with this gene model
AAPAMFAE_00193 2.6e-57
AAPAMFAE_00194 1.3e-145 I transferase activity, transferring acyl groups other than amino-acyl groups
AAPAMFAE_00195 2.8e-244 nhaC C Na H antiporter NhaC
AAPAMFAE_00196 7e-200 pbpX V Beta-lactamase
AAPAMFAE_00197 2.2e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AAPAMFAE_00198 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
AAPAMFAE_00203 8.5e-260 emrY EGP Major facilitator Superfamily
AAPAMFAE_00204 2e-91 yxdD K Bacterial regulatory proteins, tetR family
AAPAMFAE_00205 0.0 4.2.1.53 S Myosin-crossreactive antigen
AAPAMFAE_00206 2.1e-34 S Domain of unknown function (DUF4417)
AAPAMFAE_00207 4.8e-19
AAPAMFAE_00208 1.9e-20
AAPAMFAE_00209 1.1e-14 K Helix-turn-helix XRE-family like proteins
AAPAMFAE_00210 1.9e-16 E Pfam:DUF955
AAPAMFAE_00211 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
AAPAMFAE_00212 7e-158 S reductase
AAPAMFAE_00213 9.3e-35
AAPAMFAE_00214 7.2e-294 K Putative DNA-binding domain
AAPAMFAE_00215 2.9e-238 pyrP F Permease
AAPAMFAE_00216 1.1e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AAPAMFAE_00217 1e-260 emrY EGP Major facilitator Superfamily
AAPAMFAE_00218 5.8e-214 mdtG EGP Major facilitator Superfamily
AAPAMFAE_00219 2.4e-136
AAPAMFAE_00220 2.5e-25
AAPAMFAE_00221 2.3e-66
AAPAMFAE_00222 7.3e-208 pepA E M42 glutamyl aminopeptidase
AAPAMFAE_00223 9e-311 ybiT S ABC transporter, ATP-binding protein
AAPAMFAE_00224 5.9e-174 S Aldo keto reductase
AAPAMFAE_00225 6.1e-151
AAPAMFAE_00226 1.2e-239 steT E amino acid
AAPAMFAE_00227 3e-243 steT E amino acid
AAPAMFAE_00228 1.4e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
AAPAMFAE_00229 6.4e-148 glnH ET ABC transporter
AAPAMFAE_00230 1.4e-80 K Transcriptional regulator, MarR family
AAPAMFAE_00231 1.7e-310 XK27_09600 V ABC transporter, ATP-binding protein
AAPAMFAE_00232 0.0 V ABC transporter transmembrane region
AAPAMFAE_00233 3.8e-102 S ABC-type cobalt transport system, permease component
AAPAMFAE_00234 1.9e-253 G MFS/sugar transport protein
AAPAMFAE_00235 3.6e-114 udk 2.7.1.48 F Zeta toxin
AAPAMFAE_00236 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AAPAMFAE_00237 1.5e-149 glnH ET ABC transporter substrate-binding protein
AAPAMFAE_00238 9.7e-91 gluC P ABC transporter permease
AAPAMFAE_00239 4.7e-109 glnP P ABC transporter permease
AAPAMFAE_00240 1.6e-163 S Protein of unknown function (DUF2974)
AAPAMFAE_00241 1.2e-114 L Resolvase, N-terminal
AAPAMFAE_00242 1.2e-257 L Putative transposase DNA-binding domain
AAPAMFAE_00243 2.5e-86
AAPAMFAE_00244 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
AAPAMFAE_00245 5.9e-236 G Bacterial extracellular solute-binding protein
AAPAMFAE_00246 3.5e-162 2.7.7.12 C Domain of unknown function (DUF4931)
AAPAMFAE_00247 1.8e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AAPAMFAE_00248 9e-127 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AAPAMFAE_00249 0.0 kup P Transport of potassium into the cell
AAPAMFAE_00250 2.8e-176 rihB 3.2.2.1 F Nucleoside
AAPAMFAE_00251 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
AAPAMFAE_00252 1.2e-154 S hydrolase
AAPAMFAE_00253 1.9e-59 S Enterocin A Immunity
AAPAMFAE_00254 3.7e-137 glcR K DeoR C terminal sensor domain
AAPAMFAE_00255 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
AAPAMFAE_00256 3.4e-160 rssA S Phospholipase, patatin family
AAPAMFAE_00257 9.5e-152 S hydrolase
AAPAMFAE_00258 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
AAPAMFAE_00259 6.4e-148 glvR K Helix-turn-helix domain, rpiR family
AAPAMFAE_00260 7e-81
AAPAMFAE_00261 4.2e-86 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AAPAMFAE_00262 5.9e-32
AAPAMFAE_00263 1.9e-118 C nitroreductase
AAPAMFAE_00264 2.2e-249 yhdP S Transporter associated domain
AAPAMFAE_00265 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
AAPAMFAE_00266 0.0 1.3.5.4 C FAD binding domain
AAPAMFAE_00267 7.7e-89 L PFAM transposase, IS4 family protein
AAPAMFAE_00268 0.0 1.3.5.4 C FAD binding domain
AAPAMFAE_00269 1.3e-230 potE E amino acid
AAPAMFAE_00270 2.4e-130 M Glycosyl hydrolases family 25
AAPAMFAE_00271 4e-210 yfmL 3.6.4.13 L DEAD DEAH box helicase
AAPAMFAE_00272 8e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AAPAMFAE_00274 1.7e-215 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
AAPAMFAE_00275 3.1e-87 gtcA S Teichoic acid glycosylation protein
AAPAMFAE_00276 4.1e-80 fld C Flavodoxin
AAPAMFAE_00277 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
AAPAMFAE_00278 3.6e-163 yihY S Belongs to the UPF0761 family
AAPAMFAE_00279 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
AAPAMFAE_00280 2.5e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
AAPAMFAE_00281 4.5e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
AAPAMFAE_00282 5.5e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
AAPAMFAE_00283 9.4e-46
AAPAMFAE_00284 6.7e-178 D Alpha beta
AAPAMFAE_00285 2.3e-262 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AAPAMFAE_00286 5.6e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
AAPAMFAE_00287 1.6e-85
AAPAMFAE_00288 1.6e-74
AAPAMFAE_00289 1.1e-140 hlyX S Transporter associated domain
AAPAMFAE_00290 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AAPAMFAE_00291 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
AAPAMFAE_00292 0.0 clpE O Belongs to the ClpA ClpB family
AAPAMFAE_00293 5.3e-26
AAPAMFAE_00294 8.5e-41 ptsH G phosphocarrier protein HPR
AAPAMFAE_00295 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AAPAMFAE_00296 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AAPAMFAE_00297 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
AAPAMFAE_00298 1.7e-159 coiA 3.6.4.12 S Competence protein
AAPAMFAE_00299 1.3e-113 yjbH Q Thioredoxin
AAPAMFAE_00300 1.2e-109 yjbK S CYTH
AAPAMFAE_00301 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
AAPAMFAE_00302 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AAPAMFAE_00303 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AAPAMFAE_00304 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
AAPAMFAE_00305 2.5e-92 S SNARE associated Golgi protein
AAPAMFAE_00306 2.2e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
AAPAMFAE_00307 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
AAPAMFAE_00308 2.6e-214 yubA S AI-2E family transporter
AAPAMFAE_00309 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
AAPAMFAE_00310 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
AAPAMFAE_00311 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
AAPAMFAE_00312 2.6e-222 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
AAPAMFAE_00313 3.9e-237 S Peptidase M16
AAPAMFAE_00314 1.4e-133 IQ Enoyl-(Acyl carrier protein) reductase
AAPAMFAE_00315 6.8e-97 ymfM S Helix-turn-helix domain
AAPAMFAE_00316 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AAPAMFAE_00317 8.5e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AAPAMFAE_00318 4.3e-220 rny S Endoribonuclease that initiates mRNA decay
AAPAMFAE_00319 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
AAPAMFAE_00320 5.1e-119 yvyE 3.4.13.9 S YigZ family
AAPAMFAE_00321 7.3e-247 comFA L Helicase C-terminal domain protein
AAPAMFAE_00322 1.9e-103 comFC S Competence protein
AAPAMFAE_00323 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AAPAMFAE_00324 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
AAPAMFAE_00325 1.7e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AAPAMFAE_00326 5.1e-17
AAPAMFAE_00327 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AAPAMFAE_00328 4.9e-159 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AAPAMFAE_00329 3.9e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
AAPAMFAE_00330 1.1e-180 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
AAPAMFAE_00331 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
AAPAMFAE_00332 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
AAPAMFAE_00333 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
AAPAMFAE_00334 1.1e-90 S Short repeat of unknown function (DUF308)
AAPAMFAE_00335 6.2e-165 rapZ S Displays ATPase and GTPase activities
AAPAMFAE_00336 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
AAPAMFAE_00337 2.1e-171 whiA K May be required for sporulation
AAPAMFAE_00338 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
AAPAMFAE_00339 0.0 S SH3-like domain
AAPAMFAE_00340 4.9e-111 ybbL S ABC transporter, ATP-binding protein
AAPAMFAE_00341 8.7e-131 ybbM S Uncharacterised protein family (UPF0014)
AAPAMFAE_00342 2.3e-96 S Domain of unknown function (DUF4811)
AAPAMFAE_00343 6.4e-263 lmrB EGP Major facilitator Superfamily
AAPAMFAE_00344 3.2e-77 K MerR HTH family regulatory protein
AAPAMFAE_00345 5.4e-144 S Cysteine-rich secretory protein family
AAPAMFAE_00346 9.2e-275 ycaM E amino acid
AAPAMFAE_00347 7.5e-291
AAPAMFAE_00349 1.5e-189 cggR K Putative sugar-binding domain
AAPAMFAE_00350 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
AAPAMFAE_00351 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
AAPAMFAE_00352 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AAPAMFAE_00353 1.2e-94
AAPAMFAE_00354 8.1e-157 ycsE S Sucrose-6F-phosphate phosphohydrolase
AAPAMFAE_00355 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AAPAMFAE_00356 6.3e-182 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
AAPAMFAE_00357 1.4e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
AAPAMFAE_00358 8.9e-98 dnaQ 2.7.7.7 L DNA polymerase III
AAPAMFAE_00359 1.8e-164 murB 1.3.1.98 M Cell wall formation
AAPAMFAE_00360 5.3e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AAPAMFAE_00361 1.4e-131 potB P ABC transporter permease
AAPAMFAE_00362 2.1e-127 potC P ABC transporter permease
AAPAMFAE_00363 7.3e-208 potD P ABC transporter
AAPAMFAE_00364 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AAPAMFAE_00365 2e-172 ybbR S YbbR-like protein
AAPAMFAE_00366 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AAPAMFAE_00367 1.4e-147 S hydrolase
AAPAMFAE_00368 5.1e-75 K Penicillinase repressor
AAPAMFAE_00369 2.5e-119
AAPAMFAE_00370 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AAPAMFAE_00371 2.5e-206 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
AAPAMFAE_00372 1.7e-143 licT K CAT RNA binding domain
AAPAMFAE_00373 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
AAPAMFAE_00374 2.6e-301 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AAPAMFAE_00375 9.4e-175 D Alpha beta
AAPAMFAE_00376 2e-302 E Amino acid permease
AAPAMFAE_00378 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AAPAMFAE_00379 2e-112 ylbE GM NAD(P)H-binding
AAPAMFAE_00380 2.9e-93 S VanZ like family
AAPAMFAE_00381 8.9e-133 yebC K Transcriptional regulatory protein
AAPAMFAE_00382 1.7e-179 comGA NU Type II IV secretion system protein
AAPAMFAE_00383 1.1e-170 comGB NU type II secretion system
AAPAMFAE_00384 3.1e-43 comGC U competence protein ComGC
AAPAMFAE_00385 7.4e-71
AAPAMFAE_00386 2.3e-41
AAPAMFAE_00387 1.9e-76 comGF U Putative Competence protein ComGF
AAPAMFAE_00388 1.6e-21
AAPAMFAE_00389 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
AAPAMFAE_00390 5.4e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AAPAMFAE_00392 2.5e-89 M Protein of unknown function (DUF3737)
AAPAMFAE_00393 3.5e-224 patB 4.4.1.8 E Aminotransferase, class I
AAPAMFAE_00394 1.4e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
AAPAMFAE_00395 1.3e-66 S SdpI/YhfL protein family
AAPAMFAE_00396 2e-129 K Transcriptional regulatory protein, C terminal
AAPAMFAE_00397 1.4e-265 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
AAPAMFAE_00398 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AAPAMFAE_00399 1.4e-104 vanZ V VanZ like family
AAPAMFAE_00400 2.2e-254 pgi 5.3.1.9 G Belongs to the GPI family
AAPAMFAE_00401 5.3e-219 EGP Major facilitator Superfamily
AAPAMFAE_00402 3e-195 ampC V Beta-lactamase
AAPAMFAE_00405 5.8e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
AAPAMFAE_00406 1.3e-113 tdk 2.7.1.21 F thymidine kinase
AAPAMFAE_00407 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AAPAMFAE_00408 1.1e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
AAPAMFAE_00409 1.4e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
AAPAMFAE_00410 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AAPAMFAE_00411 5.1e-125 atpB C it plays a direct role in the translocation of protons across the membrane
AAPAMFAE_00412 6.6e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AAPAMFAE_00413 6.6e-50 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AAPAMFAE_00414 3.7e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AAPAMFAE_00415 5.3e-281 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AAPAMFAE_00416 1.7e-168 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AAPAMFAE_00417 8.1e-255 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AAPAMFAE_00418 7.6e-71 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
AAPAMFAE_00419 4.1e-31 ywzB S Protein of unknown function (DUF1146)
AAPAMFAE_00420 2.5e-178 mbl D Cell shape determining protein MreB Mrl
AAPAMFAE_00421 2e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
AAPAMFAE_00422 1.5e-33 S Protein of unknown function (DUF2969)
AAPAMFAE_00423 1.2e-216 rodA D Belongs to the SEDS family
AAPAMFAE_00424 4.6e-60
AAPAMFAE_00425 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AAPAMFAE_00426 4e-293 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AAPAMFAE_00427 1.8e-215 iscS2 2.8.1.7 E Aminotransferase class V
AAPAMFAE_00428 3.8e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AAPAMFAE_00429 1.8e-41 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
AAPAMFAE_00430 4.5e-79
AAPAMFAE_00431 2.6e-135 K Helix-turn-helix XRE-family like proteins
AAPAMFAE_00432 4.9e-99 S SLAP domain
AAPAMFAE_00433 2.8e-151 K Helix-turn-helix XRE-family like proteins
AAPAMFAE_00434 1.2e-94
AAPAMFAE_00435 1.2e-41
AAPAMFAE_00436 2.4e-201
AAPAMFAE_00437 2.6e-195
AAPAMFAE_00438 8.8e-293 S SLAP domain
AAPAMFAE_00439 2.6e-106 S Protein of unknown function (DUF3232)
AAPAMFAE_00440 2.1e-39 K Helix-turn-helix XRE-family like proteins
AAPAMFAE_00441 2e-70
AAPAMFAE_00442 4.7e-188
AAPAMFAE_00443 2.7e-126 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
AAPAMFAE_00444 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AAPAMFAE_00445 8.5e-107 K Helix-turn-helix domain
AAPAMFAE_00446 0.0 tetP J elongation factor G
AAPAMFAE_00447 3.3e-144 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
AAPAMFAE_00448 1.3e-229 L Transposase
AAPAMFAE_00449 8.9e-51
AAPAMFAE_00451 1.9e-132 EGP Major facilitator Superfamily
AAPAMFAE_00452 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AAPAMFAE_00455 6.3e-159 xth 3.1.11.2 L exodeoxyribonuclease III
AAPAMFAE_00456 4.3e-272 E amino acid
AAPAMFAE_00457 0.0 L Helicase C-terminal domain protein
AAPAMFAE_00458 6.2e-205 pbpX1 V Beta-lactamase
AAPAMFAE_00459 7.9e-227 N Uncharacterized conserved protein (DUF2075)
AAPAMFAE_00460 1e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
AAPAMFAE_00461 6.8e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
AAPAMFAE_00462 1.5e-94 S Protein of unknown function (DUF3990)
AAPAMFAE_00463 2.9e-44
AAPAMFAE_00465 0.0 3.6.3.8 P P-type ATPase
AAPAMFAE_00466 2.1e-171
AAPAMFAE_00467 5.8e-106 K Helix-turn-helix domain
AAPAMFAE_00468 5.9e-32 K Helix-turn-helix domain
AAPAMFAE_00469 4.3e-16 1.3.5.4 C FAD binding domain
AAPAMFAE_00470 2.4e-62 S Phage derived protein Gp49-like (DUF891)
AAPAMFAE_00471 3e-41 K Helix-turn-helix XRE-family like proteins
AAPAMFAE_00472 4.2e-68
AAPAMFAE_00473 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
AAPAMFAE_00474 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
AAPAMFAE_00475 2e-126 S Haloacid dehalogenase-like hydrolase
AAPAMFAE_00476 1.1e-107 radC L DNA repair protein
AAPAMFAE_00477 1.8e-176 mreB D cell shape determining protein MreB
AAPAMFAE_00478 8.8e-148 mreC M Involved in formation and maintenance of cell shape
AAPAMFAE_00479 6e-94 mreD
AAPAMFAE_00481 6.4e-54 S Protein of unknown function (DUF3397)
AAPAMFAE_00482 2.4e-77 mraZ K Belongs to the MraZ family
AAPAMFAE_00483 5e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
AAPAMFAE_00484 4.1e-54 ftsL D Cell division protein FtsL
AAPAMFAE_00485 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
AAPAMFAE_00486 1.1e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AAPAMFAE_00487 9.5e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AAPAMFAE_00488 4.4e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AAPAMFAE_00489 4.1e-153 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
AAPAMFAE_00490 3.8e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
AAPAMFAE_00491 1.8e-219 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AAPAMFAE_00492 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
AAPAMFAE_00493 1.9e-44 yggT S YGGT family
AAPAMFAE_00494 6.7e-150 ylmH S S4 domain protein
AAPAMFAE_00495 2.8e-74 gpsB D DivIVA domain protein
AAPAMFAE_00496 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AAPAMFAE_00497 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
AAPAMFAE_00498 1.3e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
AAPAMFAE_00499 2.1e-38
AAPAMFAE_00500 2.6e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AAPAMFAE_00501 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
AAPAMFAE_00502 2.2e-57 XK27_04120 S Putative amino acid metabolism
AAPAMFAE_00503 1.3e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
AAPAMFAE_00504 1.5e-126 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
AAPAMFAE_00505 5.4e-105 S Repeat protein
AAPAMFAE_00506 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
AAPAMFAE_00507 1.2e-294 L Nuclease-related domain
AAPAMFAE_00508 6.1e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
AAPAMFAE_00509 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AAPAMFAE_00510 3.2e-33 ykzG S Belongs to the UPF0356 family
AAPAMFAE_00511 2e-233 L COG3547 Transposase and inactivated derivatives
AAPAMFAE_00512 3.4e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
AAPAMFAE_00513 0.0 typA T GTP-binding protein TypA
AAPAMFAE_00514 5.4e-212 ftsW D Belongs to the SEDS family
AAPAMFAE_00515 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
AAPAMFAE_00516 3.8e-96 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
AAPAMFAE_00517 1.3e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AAPAMFAE_00518 2.1e-188 ylbL T Belongs to the peptidase S16 family
AAPAMFAE_00519 4.1e-79 comEA L Competence protein ComEA
AAPAMFAE_00520 3e-196 comEC S Competence protein ComEC
AAPAMFAE_00521 2.2e-215 comEC S Competence protein ComEC
AAPAMFAE_00522 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
AAPAMFAE_00523 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
AAPAMFAE_00524 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AAPAMFAE_00525 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AAPAMFAE_00526 1.1e-147
AAPAMFAE_00527 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AAPAMFAE_00528 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
AAPAMFAE_00529 1.7e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AAPAMFAE_00530 3.7e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
AAPAMFAE_00531 1.3e-22 yjeM E Amino Acid
AAPAMFAE_00532 1.2e-89 yjeM E Amino acid permease
AAPAMFAE_00533 6.8e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AAPAMFAE_00534 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
AAPAMFAE_00535 1.1e-247 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
AAPAMFAE_00536 9.7e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
AAPAMFAE_00537 1.5e-219 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
AAPAMFAE_00538 2.8e-176 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AAPAMFAE_00539 2e-143 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
AAPAMFAE_00540 3.8e-218 aspC 2.6.1.1 E Aminotransferase
AAPAMFAE_00541 1.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AAPAMFAE_00542 5.6e-195 pbpX1 V Beta-lactamase
AAPAMFAE_00543 5.4e-300 I Protein of unknown function (DUF2974)
AAPAMFAE_00544 3.6e-39 C FMN_bind
AAPAMFAE_00545 2.3e-82
AAPAMFAE_00546 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
AAPAMFAE_00547 1.2e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AAPAMFAE_00548 1.4e-127 K UTRA domain
AAPAMFAE_00549 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
AAPAMFAE_00550 1.9e-59 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
AAPAMFAE_00551 3.2e-71 S Domain of unknown function (DUF3284)
AAPAMFAE_00552 1.2e-298 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AAPAMFAE_00553 1.7e-120 gmuR K UTRA
AAPAMFAE_00554 7.3e-132 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AAPAMFAE_00555 6.1e-47 pts23C 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AAPAMFAE_00556 1.9e-272 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AAPAMFAE_00557 5.4e-137 ypbG 2.7.1.2 GK ROK family
AAPAMFAE_00558 6e-85 C nitroreductase
AAPAMFAE_00559 5.4e-89 S Domain of unknown function (DUF4767)
AAPAMFAE_00560 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
AAPAMFAE_00561 1.5e-147 yitS S Uncharacterised protein, DegV family COG1307
AAPAMFAE_00562 2.2e-102 3.6.1.27 I Acid phosphatase homologues
AAPAMFAE_00563 5.1e-192 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AAPAMFAE_00565 9.2e-176 MA20_14895 S Conserved hypothetical protein 698
AAPAMFAE_00566 1.7e-68 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
AAPAMFAE_00567 5.5e-283 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
AAPAMFAE_00568 1.2e-30 copZ C Heavy-metal-associated domain
AAPAMFAE_00569 6.1e-78 dps P Belongs to the Dps family
AAPAMFAE_00570 7.9e-85 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
AAPAMFAE_00571 1.2e-129 yobV1 K WYL domain
AAPAMFAE_00572 1.8e-55 S pyridoxamine 5-phosphate
AAPAMFAE_00573 3.8e-84 dps P Belongs to the Dps family
AAPAMFAE_00574 1.7e-97 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
AAPAMFAE_00575 2.9e-70 S Putative adhesin
AAPAMFAE_00576 3e-190 L COG2826 Transposase and inactivated derivatives, IS30 family
AAPAMFAE_00577 1.8e-75 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
AAPAMFAE_00578 1.2e-236 mepA V MATE efflux family protein
AAPAMFAE_00579 2.3e-45 L An automated process has identified a potential problem with this gene model
AAPAMFAE_00580 5.9e-49 M Peptidase family M1 domain
AAPAMFAE_00581 9.9e-80
AAPAMFAE_00582 7.6e-36
AAPAMFAE_00584 1.3e-246 ydaM M Glycosyl transferase
AAPAMFAE_00585 2.7e-177 G Glycosyl hydrolases family 8
AAPAMFAE_00586 3.9e-85 L Transposase and inactivated derivatives, IS30 family
AAPAMFAE_00587 2.2e-12 L Transposase and inactivated derivatives, IS30 family
AAPAMFAE_00588 5.7e-89 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AAPAMFAE_00589 2.7e-31 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AAPAMFAE_00590 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
AAPAMFAE_00591 4.1e-228 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
AAPAMFAE_00592 4e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
AAPAMFAE_00593 4.2e-203 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AAPAMFAE_00594 1.4e-119 lsa S ABC transporter
AAPAMFAE_00595 1.9e-84 S Protein of unknown function (DUF1211)
AAPAMFAE_00596 3.9e-59 ltrA S Bacterial low temperature requirement A protein (LtrA)
AAPAMFAE_00597 6.9e-118 3.6.1.55 F NUDIX domain
AAPAMFAE_00598 1.8e-243 brnQ U Component of the transport system for branched-chain amino acids
AAPAMFAE_00599 0.0 L Plasmid pRiA4b ORF-3-like protein
AAPAMFAE_00600 1.4e-84 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AAPAMFAE_00601 5.5e-99 rbtT P Major Facilitator Superfamily
AAPAMFAE_00602 3.8e-204 XK27_00915 C Luciferase-like monooxygenase
AAPAMFAE_00603 1.3e-87 K GNAT family
AAPAMFAE_00604 4.7e-31 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
AAPAMFAE_00605 1.6e-57 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
AAPAMFAE_00607 1.5e-36
AAPAMFAE_00608 5.6e-278 P ABC transporter
AAPAMFAE_00609 1e-282 V ABC-type multidrug transport system, ATPase and permease components
AAPAMFAE_00610 2.4e-251 yifK E Amino acid permease
AAPAMFAE_00611 1.5e-180 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AAPAMFAE_00612 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AAPAMFAE_00613 0.0 aha1 P E1-E2 ATPase
AAPAMFAE_00614 1.9e-175 F DNA/RNA non-specific endonuclease
AAPAMFAE_00615 2.9e-159 metQ2 P Belongs to the nlpA lipoprotein family
AAPAMFAE_00616 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AAPAMFAE_00617 5.3e-74 metI P ABC transporter permease
AAPAMFAE_00618 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
AAPAMFAE_00619 1.9e-261 frdC 1.3.5.4 C FAD binding domain
AAPAMFAE_00620 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AAPAMFAE_00621 2.1e-257 pepC 3.4.22.40 E Peptidase C1-like family
AAPAMFAE_00622 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
AAPAMFAE_00623 3e-273 P Sodium:sulfate symporter transmembrane region
AAPAMFAE_00624 1.4e-152 ydjP I Alpha/beta hydrolase family
AAPAMFAE_00625 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AAPAMFAE_00626 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
AAPAMFAE_00627 8.2e-168 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
AAPAMFAE_00628 4.9e-290 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
AAPAMFAE_00629 9.3e-72 yeaL S Protein of unknown function (DUF441)
AAPAMFAE_00630 1.8e-22
AAPAMFAE_00631 4.7e-146 cbiQ P cobalt transport
AAPAMFAE_00632 0.0 ykoD P ABC transporter, ATP-binding protein
AAPAMFAE_00633 9.6e-95 S UPF0397 protein
AAPAMFAE_00634 2.9e-66 S Domain of unknown function DUF1828
AAPAMFAE_00635 4.7e-08
AAPAMFAE_00636 1.3e-51
AAPAMFAE_00637 2.6e-177 citR K Putative sugar-binding domain
AAPAMFAE_00638 2.8e-249 yjjP S Putative threonine/serine exporter
AAPAMFAE_00639 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AAPAMFAE_00640 2.5e-175 prmA J Ribosomal protein L11 methyltransferase
AAPAMFAE_00641 2.9e-60
AAPAMFAE_00642 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AAPAMFAE_00643 4.6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
AAPAMFAE_00644 6.8e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
AAPAMFAE_00645 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
AAPAMFAE_00646 7.5e-222 patA 2.6.1.1 E Aminotransferase
AAPAMFAE_00648 2.8e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AAPAMFAE_00651 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
AAPAMFAE_00652 7e-36 S Cytochrome B5
AAPAMFAE_00653 4.6e-168 arbZ I Phosphate acyltransferases
AAPAMFAE_00654 1.1e-178 arbY M Glycosyl transferase family 8
AAPAMFAE_00655 5.9e-185 arbY M Glycosyl transferase family 8
AAPAMFAE_00656 1.2e-157 arbx M Glycosyl transferase family 8
AAPAMFAE_00657 1.4e-149 arbV 2.3.1.51 I Acyl-transferase
AAPAMFAE_00659 4.9e-34
AAPAMFAE_00661 4.8e-131 K response regulator
AAPAMFAE_00662 5e-305 vicK 2.7.13.3 T Histidine kinase
AAPAMFAE_00663 9.4e-245 yycH S YycH protein
AAPAMFAE_00664 8.8e-145 yycI S YycH protein
AAPAMFAE_00665 8.2e-148 vicX 3.1.26.11 S domain protein
AAPAMFAE_00666 3.3e-151 htrA 3.4.21.107 O serine protease
AAPAMFAE_00667 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AAPAMFAE_00668 2.3e-113 M NlpC/P60 family
AAPAMFAE_00669 1.6e-91 G Peptidase_C39 like family
AAPAMFAE_00670 5.1e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
AAPAMFAE_00671 3.6e-77 P Cobalt transport protein
AAPAMFAE_00672 4.3e-250 cbiO1 S ABC transporter, ATP-binding protein
AAPAMFAE_00673 7.9e-174 K helix_turn_helix, arabinose operon control protein
AAPAMFAE_00674 7.5e-158 htpX O Belongs to the peptidase M48B family
AAPAMFAE_00675 1.8e-96 lemA S LemA family
AAPAMFAE_00676 2.8e-194 ybiR P Citrate transporter
AAPAMFAE_00677 2.7e-70 S Iron-sulphur cluster biosynthesis
AAPAMFAE_00678 1.9e-76 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
AAPAMFAE_00679 4.1e-226 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
AAPAMFAE_00680 1.2e-17
AAPAMFAE_00681 4e-116
AAPAMFAE_00683 6.8e-216 ydaM M Glycosyl transferase
AAPAMFAE_00685 1.8e-151 G Glycosyl hydrolases family 8
AAPAMFAE_00686 1.4e-121 yfbR S HD containing hydrolase-like enzyme
AAPAMFAE_00687 1.5e-155 L HNH nucleases
AAPAMFAE_00688 1.2e-137 S Protein of unknown function (DUF805)
AAPAMFAE_00689 3.1e-136 glnQ E ABC transporter, ATP-binding protein
AAPAMFAE_00690 1.3e-290 glnP P ABC transporter permease
AAPAMFAE_00691 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
AAPAMFAE_00692 2e-64 yeaO S Protein of unknown function, DUF488
AAPAMFAE_00693 9.6e-125 terC P Integral membrane protein TerC family
AAPAMFAE_00694 9.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
AAPAMFAE_00695 3.8e-133 cobB K SIR2 family
AAPAMFAE_00696 4.2e-86
AAPAMFAE_00697 7.1e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AAPAMFAE_00698 1.6e-182 S Alpha/beta hydrolase of unknown function (DUF915)
AAPAMFAE_00699 1.3e-145 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AAPAMFAE_00700 1.3e-139 ypuA S Protein of unknown function (DUF1002)
AAPAMFAE_00701 1.3e-156 epsV 2.7.8.12 S glycosyl transferase family 2
AAPAMFAE_00702 7.3e-126 S Alpha/beta hydrolase family
AAPAMFAE_00703 1e-53
AAPAMFAE_00704 2.6e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AAPAMFAE_00705 3.8e-125 luxT K Bacterial regulatory proteins, tetR family
AAPAMFAE_00706 2.8e-135
AAPAMFAE_00707 1.3e-258 glnPH2 P ABC transporter permease
AAPAMFAE_00708 3.1e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AAPAMFAE_00709 5.8e-225 S Cysteine-rich secretory protein family
AAPAMFAE_00710 1.8e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
AAPAMFAE_00711 4e-112
AAPAMFAE_00712 2.2e-202 yibE S overlaps another CDS with the same product name
AAPAMFAE_00713 3.4e-130 yibF S overlaps another CDS with the same product name
AAPAMFAE_00714 1.4e-147 I alpha/beta hydrolase fold
AAPAMFAE_00715 0.0 G Belongs to the glycosyl hydrolase 31 family
AAPAMFAE_00716 4.1e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
AAPAMFAE_00717 6.6e-156 S reductase
AAPAMFAE_00718 2.6e-149 yxeH S hydrolase
AAPAMFAE_00719 2.6e-180 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AAPAMFAE_00720 3.6e-244 yfnA E Amino Acid
AAPAMFAE_00721 1.4e-107 dedA 3.1.3.1 S SNARE associated Golgi protein
AAPAMFAE_00722 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
AAPAMFAE_00723 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AAPAMFAE_00724 3.7e-295 I Acyltransferase
AAPAMFAE_00725 5.8e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
AAPAMFAE_00726 7.4e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
AAPAMFAE_00727 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
AAPAMFAE_00728 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
AAPAMFAE_00729 2.1e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
AAPAMFAE_00730 2.3e-23 S Protein of unknown function (DUF2929)
AAPAMFAE_00731 0.0 dnaE 2.7.7.7 L DNA polymerase
AAPAMFAE_00732 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
AAPAMFAE_00733 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
AAPAMFAE_00734 3.6e-168 cvfB S S1 domain
AAPAMFAE_00735 7.6e-166 xerD D recombinase XerD
AAPAMFAE_00736 4.3e-13 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AAPAMFAE_00737 6.7e-30 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AAPAMFAE_00738 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AAPAMFAE_00739 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AAPAMFAE_00740 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
AAPAMFAE_00741 1.1e-113 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AAPAMFAE_00742 2.7e-18 M Lysin motif
AAPAMFAE_00743 1.5e-113 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
AAPAMFAE_00744 7.1e-212 rpsA 1.17.7.4 J Ribosomal protein S1
AAPAMFAE_00745 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
AAPAMFAE_00746 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AAPAMFAE_00747 1.9e-228 S Tetratricopeptide repeat protein
AAPAMFAE_00748 5.8e-288 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AAPAMFAE_00749 2.7e-91 V ABC transporter transmembrane region
AAPAMFAE_00751 5.9e-138 L COG2826 Transposase and inactivated derivatives, IS30 family
AAPAMFAE_00752 2.4e-98 speG J Acetyltransferase (GNAT) domain
AAPAMFAE_00753 6.3e-76
AAPAMFAE_00754 5.3e-30 S MazG-like family
AAPAMFAE_00755 2e-53
AAPAMFAE_00756 5.6e-24 S Protein of unknown function (DUF3923)
AAPAMFAE_00757 3.1e-114 S Fic/DOC family
AAPAMFAE_00758 7.3e-108 glsA 3.5.1.2 E Belongs to the glutaminase family
AAPAMFAE_00759 1.9e-229
AAPAMFAE_00760 1.5e-89 rimL J Acetyltransferase (GNAT) domain
AAPAMFAE_00761 6.2e-140 S Alpha/beta hydrolase family
AAPAMFAE_00762 5.6e-56 yxaM EGP Major facilitator Superfamily
AAPAMFAE_00763 4.1e-55 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
AAPAMFAE_00764 3.5e-126 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
AAPAMFAE_00765 9.3e-81 S AAA domain
AAPAMFAE_00766 6.9e-144 2.4.2.3 F Phosphorylase superfamily
AAPAMFAE_00767 1.8e-144 2.4.2.3 F Phosphorylase superfamily
AAPAMFAE_00768 1.1e-150 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
AAPAMFAE_00769 8.2e-82 yagE E amino acid
AAPAMFAE_00770 2.9e-28 yagE E amino acid
AAPAMFAE_00771 1e-46 yagE E Amino acid permease
AAPAMFAE_00772 4.3e-86 3.4.21.96 S SLAP domain
AAPAMFAE_00773 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAPAMFAE_00774 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
AAPAMFAE_00775 3.4e-107 hlyIII S protein, hemolysin III
AAPAMFAE_00776 2.8e-146 DegV S Uncharacterised protein, DegV family COG1307
AAPAMFAE_00777 7.1e-36 yozE S Belongs to the UPF0346 family
AAPAMFAE_00778 8.9e-38 yjcE P NhaP-type Na H and K H
AAPAMFAE_00779 1.3e-178 yjcE P Sodium proton antiporter
AAPAMFAE_00780 7.3e-155 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AAPAMFAE_00781 1.7e-131 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AAPAMFAE_00782 7.6e-152 dprA LU DNA protecting protein DprA
AAPAMFAE_00783 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AAPAMFAE_00784 3e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AAPAMFAE_00785 2.2e-141 xerC D Phage integrase, N-terminal SAM-like domain
AAPAMFAE_00786 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AAPAMFAE_00787 1.5e-234 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AAPAMFAE_00788 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
AAPAMFAE_00789 5.7e-73 C Aldo keto reductase
AAPAMFAE_00790 5.4e-63 M LysM domain protein
AAPAMFAE_00791 2.9e-93 xerD L Phage integrase, N-terminal SAM-like domain
AAPAMFAE_00792 1e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AAPAMFAE_00793 9.2e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AAPAMFAE_00794 2.9e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
AAPAMFAE_00795 1.2e-116 mmuP E amino acid
AAPAMFAE_00796 2e-274 pepV 3.5.1.18 E dipeptidase PepV
AAPAMFAE_00797 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
AAPAMFAE_00798 3.8e-284 E Amino acid permease
AAPAMFAE_00799 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
AAPAMFAE_00800 3.2e-247 ynbB 4.4.1.1 P aluminum resistance
AAPAMFAE_00801 2.6e-222 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
AAPAMFAE_00802 6.8e-83 C Flavodoxin
AAPAMFAE_00803 7.7e-36
AAPAMFAE_00805 3.4e-22
AAPAMFAE_00806 2.5e-78 K DNA-templated transcription, initiation
AAPAMFAE_00807 6.6e-26
AAPAMFAE_00808 8.9e-151 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AAPAMFAE_00809 0.0 uvrA3 L excinuclease ABC, A subunit
AAPAMFAE_00810 4.5e-188 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
AAPAMFAE_00811 1.8e-113 3.6.1.27 I Acid phosphatase homologues
AAPAMFAE_00812 4.3e-61 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AAPAMFAE_00813 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
AAPAMFAE_00814 1.2e-203 pbpX1 V Beta-lactamase
AAPAMFAE_00815 1.5e-99 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
AAPAMFAE_00816 2.2e-94 S ECF-type riboflavin transporter, S component
AAPAMFAE_00817 2e-230 S Putative peptidoglycan binding domain
AAPAMFAE_00818 2.8e-84 K Acetyltransferase (GNAT) domain
AAPAMFAE_00819 1.7e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
AAPAMFAE_00820 1.5e-191 yrvN L AAA C-terminal domain
AAPAMFAE_00821 1.1e-63 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AAPAMFAE_00822 8.3e-66 treB G phosphotransferase system
AAPAMFAE_00823 1.8e-265 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
AAPAMFAE_00824 1.3e-17
AAPAMFAE_00825 3e-184 G Bacterial extracellular solute-binding protein
AAPAMFAE_00826 5.5e-38 G Bacterial extracellular solute-binding protein
AAPAMFAE_00827 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
AAPAMFAE_00828 2.2e-237 XK27_01810 S Calcineurin-like phosphoesterase
AAPAMFAE_00830 0.0 S SLAP domain
AAPAMFAE_00831 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
AAPAMFAE_00833 7.9e-258 hsdM 2.1.1.72 V type I restriction-modification system
AAPAMFAE_00834 7.5e-99 3.1.21.3 V Type I restriction modification DNA specificity domain
AAPAMFAE_00835 0.0 yfjM S Protein of unknown function DUF262
AAPAMFAE_00838 2.8e-83
AAPAMFAE_00839 2.2e-65 S Sel1-like repeats.
AAPAMFAE_00840 7.2e-77 S HIRAN
AAPAMFAE_00841 1.2e-32
AAPAMFAE_00842 1e-179
AAPAMFAE_00843 3.5e-100 3.1.4.37 S AAA domain
AAPAMFAE_00844 3.1e-72 S Sel1-like repeats.
AAPAMFAE_00847 4.9e-105 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
AAPAMFAE_00848 3.5e-52
AAPAMFAE_00849 1.8e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
AAPAMFAE_00850 1.4e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AAPAMFAE_00851 3.7e-168 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AAPAMFAE_00852 4.6e-199 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
AAPAMFAE_00853 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
AAPAMFAE_00854 0.0 FbpA K Fibronectin-binding protein
AAPAMFAE_00855 1.1e-66
AAPAMFAE_00856 3.5e-160 degV S EDD domain protein, DegV family
AAPAMFAE_00857 1.9e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AAPAMFAE_00858 1.8e-203 xerS L Belongs to the 'phage' integrase family
AAPAMFAE_00859 9.1e-67
AAPAMFAE_00860 1.8e-110 XK27_00160 S Domain of unknown function (DUF5052)
AAPAMFAE_00861 1.5e-211 M Glycosyl hydrolases family 25
AAPAMFAE_00862 2e-39 S Transglycosylase associated protein
AAPAMFAE_00863 2.7e-123 yoaK S Protein of unknown function (DUF1275)
AAPAMFAE_00864 4e-57 K Helix-turn-helix domain
AAPAMFAE_00865 4.2e-112 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AAPAMFAE_00866 7.3e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
AAPAMFAE_00867 1.9e-183 K Transcriptional regulator
AAPAMFAE_00868 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AAPAMFAE_00869 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AAPAMFAE_00870 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AAPAMFAE_00871 0.0 snf 2.7.11.1 KL domain protein
AAPAMFAE_00872 1.5e-36
AAPAMFAE_00874 2.1e-72 pncA Q Isochorismatase family
AAPAMFAE_00875 3.8e-118
AAPAMFAE_00878 3.6e-63
AAPAMFAE_00879 1.4e-34
AAPAMFAE_00880 8e-261 L Transposase
AAPAMFAE_00881 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
AAPAMFAE_00882 3.4e-79
AAPAMFAE_00883 4e-242 cpdA S Calcineurin-like phosphoesterase
AAPAMFAE_00884 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
AAPAMFAE_00885 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
AAPAMFAE_00886 1.7e-116 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
AAPAMFAE_00887 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
AAPAMFAE_00888 1.2e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AAPAMFAE_00889 1.3e-114 dnaD L DnaD domain protein
AAPAMFAE_00890 2.1e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
AAPAMFAE_00891 1.2e-38 ypmB S Protein conserved in bacteria
AAPAMFAE_00892 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
AAPAMFAE_00893 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
AAPAMFAE_00894 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
AAPAMFAE_00895 2.2e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
AAPAMFAE_00896 3.7e-179 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
AAPAMFAE_00897 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
AAPAMFAE_00898 2.4e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
AAPAMFAE_00899 2.2e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
AAPAMFAE_00900 2.2e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
AAPAMFAE_00901 5.7e-169
AAPAMFAE_00902 1.8e-144
AAPAMFAE_00903 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
AAPAMFAE_00904 3.8e-27
AAPAMFAE_00905 4.3e-39 ybjQ S Belongs to the UPF0145 family
AAPAMFAE_00906 1.4e-110
AAPAMFAE_00907 3.6e-103
AAPAMFAE_00908 1.1e-121
AAPAMFAE_00909 5.2e-122 skfE V ATPases associated with a variety of cellular activities
AAPAMFAE_00910 4.3e-47 yvoA_1 K Transcriptional regulator, GntR family
AAPAMFAE_00911 4.6e-130 S SLAP domain
AAPAMFAE_00912 5e-100 cadD P Cadmium resistance transporter
AAPAMFAE_00913 2e-42 L transposase activity
AAPAMFAE_00914 1.2e-214 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AAPAMFAE_00915 2.5e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
AAPAMFAE_00916 0.0 yjbQ P TrkA C-terminal domain protein
AAPAMFAE_00917 4.8e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AAPAMFAE_00918 4.6e-161 S Oxidoreductase family, NAD-binding Rossmann fold
AAPAMFAE_00919 2.1e-130
AAPAMFAE_00920 2.1e-116
AAPAMFAE_00921 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AAPAMFAE_00922 1.4e-98 G Aldose 1-epimerase
AAPAMFAE_00923 1.8e-201 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AAPAMFAE_00924 5.6e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AAPAMFAE_00925 0.0 XK27_08315 M Sulfatase
AAPAMFAE_00926 1.6e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AAPAMFAE_00927 3.1e-54
AAPAMFAE_00929 1.4e-258 pepC 3.4.22.40 E aminopeptidase
AAPAMFAE_00930 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
AAPAMFAE_00931 1.7e-301 oppA E ABC transporter, substratebinding protein
AAPAMFAE_00932 2.9e-309 oppA E ABC transporter, substratebinding protein
AAPAMFAE_00933 1.7e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AAPAMFAE_00934 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
AAPAMFAE_00935 5.4e-184 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
AAPAMFAE_00936 7.2e-200 oppD P Belongs to the ABC transporter superfamily
AAPAMFAE_00937 1.9e-175 oppF P Belongs to the ABC transporter superfamily
AAPAMFAE_00938 3e-256 pepC 3.4.22.40 E aminopeptidase
AAPAMFAE_00939 2.6e-68 hsp O Belongs to the small heat shock protein (HSP20) family
AAPAMFAE_00940 1.3e-76 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AAPAMFAE_00941 1.2e-112
AAPAMFAE_00943 7.8e-111 E Belongs to the SOS response-associated peptidase family
AAPAMFAE_00944 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
AAPAMFAE_00945 1.9e-88 comEB 3.5.4.12 F MafB19-like deaminase
AAPAMFAE_00946 2e-103 S TPM domain
AAPAMFAE_00947 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
AAPAMFAE_00948 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AAPAMFAE_00949 7.9e-148 tatD L hydrolase, TatD family
AAPAMFAE_00950 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AAPAMFAE_00951 8.5e-162 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
AAPAMFAE_00952 1.2e-39 veg S Biofilm formation stimulator VEG
AAPAMFAE_00953 7.7e-149 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
AAPAMFAE_00954 8.9e-174 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AAPAMFAE_00955 5.3e-80
AAPAMFAE_00956 0.0 S SLAP domain
AAPAMFAE_00957 6.7e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AAPAMFAE_00958 4.2e-172 2.7.1.2 GK ROK family
AAPAMFAE_00959 4.2e-43
AAPAMFAE_00960 5e-270 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
AAPAMFAE_00961 1e-67 S Domain of unknown function (DUF1934)
AAPAMFAE_00962 1.7e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
AAPAMFAE_00963 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
AAPAMFAE_00964 2.8e-246 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AAPAMFAE_00965 2.7e-75 K acetyltransferase
AAPAMFAE_00966 9.7e-285 pipD E Dipeptidase
AAPAMFAE_00967 2.4e-155 msmR K AraC-like ligand binding domain
AAPAMFAE_00968 1.6e-222 pbuX F xanthine permease
AAPAMFAE_00969 2.8e-105 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
AAPAMFAE_00970 3.2e-21 K DNA-binding helix-turn-helix protein
AAPAMFAE_00971 1.2e-12 K Helix-turn-helix
AAPAMFAE_00972 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
AAPAMFAE_00974 1.1e-98 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
AAPAMFAE_00975 2.4e-22 3.2.1.18 GH33 M Rib/alpha-like repeat
AAPAMFAE_00976 3.2e-239 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
AAPAMFAE_00977 2.9e-153 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AAPAMFAE_00978 1.7e-122 trmK 2.1.1.217 S SAM-dependent methyltransferase
AAPAMFAE_00979 4.8e-81 mutT 3.6.1.55 F NUDIX domain
AAPAMFAE_00980 2.3e-127 S Peptidase family M23
AAPAMFAE_00981 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
AAPAMFAE_00982 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
AAPAMFAE_00983 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
AAPAMFAE_00984 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
AAPAMFAE_00985 3.1e-136 recO L Involved in DNA repair and RecF pathway recombination
AAPAMFAE_00986 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
AAPAMFAE_00987 5e-147 xerC L Belongs to the 'phage' integrase family
AAPAMFAE_00988 2.2e-55 3.1.21.3 V Type I restriction
AAPAMFAE_00989 7.8e-280 2.1.1.72 V type I restriction-modification system
AAPAMFAE_00990 8.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AAPAMFAE_00991 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AAPAMFAE_00992 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
AAPAMFAE_00993 1.6e-71 yqeY S YqeY-like protein
AAPAMFAE_00994 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
AAPAMFAE_00995 4.7e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
AAPAMFAE_00996 2.1e-106 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AAPAMFAE_00997 3e-254 3.4.24.25, 3.4.24.26 UW LPXTG-motif cell wall anchor domain protein
AAPAMFAE_00998 9.4e-69 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AAPAMFAE_01000 9.9e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
AAPAMFAE_01001 8.5e-96 dps P Belongs to the Dps family
AAPAMFAE_01002 1.9e-33 copZ C Heavy-metal-associated domain
AAPAMFAE_01003 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
AAPAMFAE_01004 1.9e-103
AAPAMFAE_01005 2e-117 S Peptidase family M23
AAPAMFAE_01006 1e-107 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AAPAMFAE_01007 6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAPAMFAE_01008 1.3e-114
AAPAMFAE_01009 5e-159 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
AAPAMFAE_01010 5.6e-220 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
AAPAMFAE_01011 5.6e-283 thrC 4.2.3.1 E Threonine synthase
AAPAMFAE_01012 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
AAPAMFAE_01013 1.5e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
AAPAMFAE_01014 0.0 L PLD-like domain
AAPAMFAE_01015 4.9e-70 hipB K sequence-specific DNA binding
AAPAMFAE_01016 2e-64 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
AAPAMFAE_01017 2.3e-282 V ABC-type multidrug transport system, ATPase and permease components
AAPAMFAE_01018 1.8e-276 V ABC-type multidrug transport system, ATPase and permease components
AAPAMFAE_01019 2.1e-95
AAPAMFAE_01020 1.9e-118 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
AAPAMFAE_01021 1.1e-98
AAPAMFAE_01022 2e-109 K LysR substrate binding domain
AAPAMFAE_01023 1e-20
AAPAMFAE_01024 3.5e-224 S Sterol carrier protein domain
AAPAMFAE_01025 1.7e-96 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
AAPAMFAE_01026 1e-108 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
AAPAMFAE_01027 6.1e-65 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AAPAMFAE_01028 1.8e-234 arcA 3.5.3.6 E Arginine
AAPAMFAE_01029 3.4e-136 lysR5 K LysR substrate binding domain
AAPAMFAE_01030 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
AAPAMFAE_01031 1.5e-49 S Metal binding domain of Ada
AAPAMFAE_01032 1.2e-39 ybhL S Belongs to the BI1 family
AAPAMFAE_01034 1.1e-211 S Bacterial protein of unknown function (DUF871)
AAPAMFAE_01035 6.2e-201 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
AAPAMFAE_01036 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AAPAMFAE_01037 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
AAPAMFAE_01038 4.5e-102 srtA 3.4.22.70 M sortase family
AAPAMFAE_01039 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
AAPAMFAE_01040 5.8e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
AAPAMFAE_01041 0.0 dnaK O Heat shock 70 kDa protein
AAPAMFAE_01042 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AAPAMFAE_01043 1.7e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
AAPAMFAE_01044 9.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
AAPAMFAE_01045 4.1e-156 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AAPAMFAE_01046 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AAPAMFAE_01047 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AAPAMFAE_01048 3.2e-47 rplGA J ribosomal protein
AAPAMFAE_01049 8.8e-47 ylxR K Protein of unknown function (DUF448)
AAPAMFAE_01050 2.6e-198 nusA K Participates in both transcription termination and antitermination
AAPAMFAE_01051 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
AAPAMFAE_01052 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AAPAMFAE_01053 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
AAPAMFAE_01054 4.8e-195 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
AAPAMFAE_01055 9.6e-136 cdsA 2.7.7.41 I Belongs to the CDS family
AAPAMFAE_01056 1.9e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AAPAMFAE_01057 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
AAPAMFAE_01058 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
AAPAMFAE_01059 8.3e-185 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AAPAMFAE_01060 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
AAPAMFAE_01061 2e-194 yabB 2.1.1.223 L Methyltransferase small domain
AAPAMFAE_01062 1.9e-112 plsC 2.3.1.51 I Acyltransferase
AAPAMFAE_01063 6.3e-229 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
AAPAMFAE_01064 1.1e-59 2.7.11.1 UW LPXTG-motif cell wall anchor domain protein
AAPAMFAE_01065 2.4e-160 3.2.1.18 GH33 M Rib/alpha-like repeat
AAPAMFAE_01068 7.9e-57 ps115 K Helix-turn-helix XRE-family like proteins
AAPAMFAE_01069 2.4e-18 yjdF S Protein of unknown function (DUF2992)
AAPAMFAE_01070 2.6e-94 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AAPAMFAE_01071 2.6e-94
AAPAMFAE_01072 3.6e-185 5.3.3.2 C FMN-dependent dehydrogenase
AAPAMFAE_01073 3.1e-51
AAPAMFAE_01074 2.1e-42
AAPAMFAE_01075 7.5e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AAPAMFAE_01076 1.1e-297 ybeC E amino acid
AAPAMFAE_01077 1.7e-156 S Sucrose-6F-phosphate phosphohydrolase
AAPAMFAE_01078 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
AAPAMFAE_01079 2.5e-39 rpmE2 J Ribosomal protein L31
AAPAMFAE_01080 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
AAPAMFAE_01081 1.8e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
AAPAMFAE_01082 6.4e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
AAPAMFAE_01083 3.8e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AAPAMFAE_01084 3.4e-129 S (CBS) domain
AAPAMFAE_01085 4e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AAPAMFAE_01086 3.9e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
AAPAMFAE_01087 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AAPAMFAE_01088 1.6e-33 yabO J S4 domain protein
AAPAMFAE_01089 6.8e-60 divIC D Septum formation initiator
AAPAMFAE_01090 6.3e-63 yabR J S1 RNA binding domain
AAPAMFAE_01091 1.3e-240 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
AAPAMFAE_01092 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AAPAMFAE_01093 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AAPAMFAE_01094 2.3e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AAPAMFAE_01095 5.4e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
AAPAMFAE_01097 1.6e-08
AAPAMFAE_01099 3.2e-80 yebR 1.8.4.14 T GAF domain-containing protein
AAPAMFAE_01100 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
AAPAMFAE_01101 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AAPAMFAE_01102 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AAPAMFAE_01103 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
AAPAMFAE_01104 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AAPAMFAE_01105 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
AAPAMFAE_01106 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AAPAMFAE_01107 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
AAPAMFAE_01108 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AAPAMFAE_01109 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
AAPAMFAE_01110 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
AAPAMFAE_01111 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AAPAMFAE_01112 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AAPAMFAE_01113 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AAPAMFAE_01114 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AAPAMFAE_01115 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AAPAMFAE_01116 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
AAPAMFAE_01117 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AAPAMFAE_01118 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AAPAMFAE_01119 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AAPAMFAE_01120 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AAPAMFAE_01121 6.8e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AAPAMFAE_01122 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AAPAMFAE_01123 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AAPAMFAE_01124 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AAPAMFAE_01125 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AAPAMFAE_01126 2.3e-24 rpmD J Ribosomal protein L30
AAPAMFAE_01127 2.6e-71 rplO J Binds to the 23S rRNA
AAPAMFAE_01128 1.4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
AAPAMFAE_01129 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
AAPAMFAE_01130 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AAPAMFAE_01131 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
AAPAMFAE_01132 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AAPAMFAE_01133 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AAPAMFAE_01134 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AAPAMFAE_01135 1.4e-60 rplQ J Ribosomal protein L17
AAPAMFAE_01136 4.8e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AAPAMFAE_01137 5.4e-158 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AAPAMFAE_01138 2.6e-138 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AAPAMFAE_01139 7.8e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
AAPAMFAE_01140 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AAPAMFAE_01141 1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
AAPAMFAE_01142 1.6e-157 M Belongs to the glycosyl hydrolase 28 family
AAPAMFAE_01143 7e-80 K Acetyltransferase (GNAT) domain
AAPAMFAE_01144 6.7e-107 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
AAPAMFAE_01145 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
AAPAMFAE_01146 2.7e-132 S membrane transporter protein
AAPAMFAE_01147 5.8e-126 gpmB G Belongs to the phosphoglycerate mutase family
AAPAMFAE_01148 5.1e-162 czcD P cation diffusion facilitator family transporter
AAPAMFAE_01149 1.4e-23
AAPAMFAE_01150 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AAPAMFAE_01151 1.1e-183 S AAA domain
AAPAMFAE_01152 2.5e-266 pepC 3.4.22.40 E Peptidase C1-like family
AAPAMFAE_01153 6.4e-53
AAPAMFAE_01154 3.4e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
AAPAMFAE_01155 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AAPAMFAE_01156 1.3e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AAPAMFAE_01157 5.2e-278 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
AAPAMFAE_01158 2.3e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AAPAMFAE_01159 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AAPAMFAE_01160 5.5e-95 sigH K Belongs to the sigma-70 factor family
AAPAMFAE_01161 1.7e-34
AAPAMFAE_01162 2.2e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
AAPAMFAE_01163 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AAPAMFAE_01164 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
AAPAMFAE_01165 1.1e-101 nusG K Participates in transcription elongation, termination and antitermination
AAPAMFAE_01166 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AAPAMFAE_01167 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
AAPAMFAE_01168 7.3e-158 pstS P Phosphate
AAPAMFAE_01169 3.9e-163 pstC P probably responsible for the translocation of the substrate across the membrane
AAPAMFAE_01170 1.2e-155 pstA P Phosphate transport system permease protein PstA
AAPAMFAE_01171 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AAPAMFAE_01172 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AAPAMFAE_01173 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
AAPAMFAE_01174 2.8e-90 L An automated process has identified a potential problem with this gene model
AAPAMFAE_01175 7.8e-13 GT2,GT4 M family 8
AAPAMFAE_01176 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AAPAMFAE_01177 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
AAPAMFAE_01178 6e-141 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
AAPAMFAE_01179 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
AAPAMFAE_01180 9e-26
AAPAMFAE_01181 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
AAPAMFAE_01182 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AAPAMFAE_01183 6.1e-60 GT2,GT4 M family 8
AAPAMFAE_01184 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AAPAMFAE_01185 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AAPAMFAE_01186 1.1e-34 S Protein of unknown function (DUF2508)
AAPAMFAE_01187 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AAPAMFAE_01188 8.9e-53 yaaQ S Cyclic-di-AMP receptor
AAPAMFAE_01189 3e-156 holB 2.7.7.7 L DNA polymerase III
AAPAMFAE_01190 1.8e-59 yabA L Involved in initiation control of chromosome replication
AAPAMFAE_01191 3e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AAPAMFAE_01192 4.4e-140 fat 3.1.2.21 I Acyl-ACP thioesterase
AAPAMFAE_01193 2.4e-87 S ECF transporter, substrate-specific component
AAPAMFAE_01194 6.2e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
AAPAMFAE_01195 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
AAPAMFAE_01196 4.8e-196 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AAPAMFAE_01197 5.6e-43
AAPAMFAE_01198 3.2e-56 L COG2963 Transposase and inactivated derivatives
AAPAMFAE_01199 0.0 uup S ABC transporter, ATP-binding protein
AAPAMFAE_01200 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AAPAMFAE_01201 1e-184 scrR K helix_turn _helix lactose operon repressor
AAPAMFAE_01202 3.7e-295 scrB 3.2.1.26 GH32 G invertase
AAPAMFAE_01203 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
AAPAMFAE_01204 5.8e-180 M CHAP domain
AAPAMFAE_01205 3.9e-74
AAPAMFAE_01206 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AAPAMFAE_01207 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
AAPAMFAE_01208 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AAPAMFAE_01209 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AAPAMFAE_01210 4.5e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
AAPAMFAE_01211 1.1e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
AAPAMFAE_01212 2.7e-40 yajC U Preprotein translocase
AAPAMFAE_01213 2.8e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AAPAMFAE_01214 1.6e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AAPAMFAE_01215 4.7e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
AAPAMFAE_01216 5.2e-227 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
AAPAMFAE_01217 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AAPAMFAE_01218 2e-42 yrzL S Belongs to the UPF0297 family
AAPAMFAE_01219 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AAPAMFAE_01220 1.1e-50 yrzB S Belongs to the UPF0473 family
AAPAMFAE_01221 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AAPAMFAE_01222 3.5e-54 trxA O Belongs to the thioredoxin family
AAPAMFAE_01223 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
AAPAMFAE_01224 4.2e-71 yslB S Protein of unknown function (DUF2507)
AAPAMFAE_01225 1.9e-144 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
AAPAMFAE_01226 1.3e-111 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AAPAMFAE_01228 9.2e-227 P Sodium:sulfate symporter transmembrane region
AAPAMFAE_01229 4.7e-276 1.3.5.4 C FMN_bind
AAPAMFAE_01230 1.6e-71 K Periplasmic binding protein-like domain
AAPAMFAE_01231 2e-106 K Transcriptional regulator, AbiEi antitoxin
AAPAMFAE_01232 6e-26 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
AAPAMFAE_01233 1.6e-126 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
AAPAMFAE_01234 1.3e-190 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
AAPAMFAE_01235 3.1e-186 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
AAPAMFAE_01236 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
AAPAMFAE_01237 7.3e-186 lacR K Transcriptional regulator
AAPAMFAE_01238 0.0 lacS G Transporter
AAPAMFAE_01239 0.0 lacZ 3.2.1.23 G -beta-galactosidase
AAPAMFAE_01240 1.3e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AAPAMFAE_01241 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
AAPAMFAE_01242 5.4e-197 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
AAPAMFAE_01243 7.2e-36
AAPAMFAE_01244 2.5e-62 scrR K Periplasmic binding protein domain
AAPAMFAE_01245 1.4e-239 msmE G Bacterial extracellular solute-binding protein
AAPAMFAE_01246 4.8e-157 msmF P Binding-protein-dependent transport system inner membrane component
AAPAMFAE_01247 5.2e-153 msmG P Binding-protein-dependent transport system inner membrane component
AAPAMFAE_01248 2.8e-210 msmX P Belongs to the ABC transporter superfamily
AAPAMFAE_01249 0.0 rafA 3.2.1.22 G alpha-galactosidase
AAPAMFAE_01250 7.3e-280 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
AAPAMFAE_01251 1.3e-113 2.7.6.5 T Region found in RelA / SpoT proteins
AAPAMFAE_01252 1.4e-105 K response regulator
AAPAMFAE_01253 9.5e-223 sptS 2.7.13.3 T Histidine kinase
AAPAMFAE_01254 2.5e-209 EGP Major facilitator Superfamily
AAPAMFAE_01255 1.6e-70 O OsmC-like protein
AAPAMFAE_01256 2.6e-94 S Protein of unknown function (DUF805)
AAPAMFAE_01257 4.9e-78
AAPAMFAE_01258 3.7e-287
AAPAMFAE_01259 2.8e-08 S Fic/DOC family
AAPAMFAE_01260 5.6e-47 S Fic/DOC family
AAPAMFAE_01261 2.1e-277 yjeM E Amino Acid
AAPAMFAE_01262 4.4e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AAPAMFAE_01263 1.5e-244 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
AAPAMFAE_01264 5e-48 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
AAPAMFAE_01265 1.1e-116 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
AAPAMFAE_01266 3.3e-52 S Iron-sulfur cluster assembly protein
AAPAMFAE_01267 1.1e-153 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
AAPAMFAE_01268 5.8e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
AAPAMFAE_01269 1.4e-44
AAPAMFAE_01270 7.9e-285 lsa S ABC transporter
AAPAMFAE_01271 4.3e-37 clcA P chloride
AAPAMFAE_01272 3.4e-19 clcA P chloride
AAPAMFAE_01273 1.1e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AAPAMFAE_01274 5.4e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
AAPAMFAE_01275 3.7e-168 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
AAPAMFAE_01276 3.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AAPAMFAE_01277 1.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
AAPAMFAE_01278 8.8e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
AAPAMFAE_01279 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
AAPAMFAE_01280 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
AAPAMFAE_01281 9.9e-251 lctP C L-lactate permease
AAPAMFAE_01282 6.1e-149 glcU U sugar transport
AAPAMFAE_01283 7.1e-46
AAPAMFAE_01284 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
AAPAMFAE_01285 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
AAPAMFAE_01286 1.2e-42 S Alpha beta hydrolase
AAPAMFAE_01287 1.9e-37
AAPAMFAE_01288 2.6e-52
AAPAMFAE_01289 5.8e-149 S haloacid dehalogenase-like hydrolase
AAPAMFAE_01290 6.3e-293 V ABC-type multidrug transport system, ATPase and permease components
AAPAMFAE_01291 2.6e-278 V ABC-type multidrug transport system, ATPase and permease components
AAPAMFAE_01292 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
AAPAMFAE_01293 8.5e-178 I Carboxylesterase family
AAPAMFAE_01295 8.4e-208 M Glycosyl hydrolases family 25
AAPAMFAE_01296 2.1e-160 cinI S Serine hydrolase (FSH1)
AAPAMFAE_01297 2.7e-292 S Predicted membrane protein (DUF2207)
AAPAMFAE_01298 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
AAPAMFAE_01300 6.6e-254 S Uncharacterized protein conserved in bacteria (DUF2325)
AAPAMFAE_01301 1.4e-150 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
AAPAMFAE_01302 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
AAPAMFAE_01303 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
AAPAMFAE_01304 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
AAPAMFAE_01305 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AAPAMFAE_01306 3.4e-71 yqhY S Asp23 family, cell envelope-related function
AAPAMFAE_01307 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AAPAMFAE_01308 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AAPAMFAE_01309 7.6e-194 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AAPAMFAE_01310 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AAPAMFAE_01311 1.6e-160 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
AAPAMFAE_01312 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
AAPAMFAE_01313 1.5e-300 recN L May be involved in recombinational repair of damaged DNA
AAPAMFAE_01314 3.2e-77 6.3.3.2 S ASCH
AAPAMFAE_01315 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
AAPAMFAE_01316 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
AAPAMFAE_01317 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AAPAMFAE_01318 2.5e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AAPAMFAE_01319 3e-243 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AAPAMFAE_01320 1.3e-139 stp 3.1.3.16 T phosphatase
AAPAMFAE_01321 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
AAPAMFAE_01322 6.3e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
AAPAMFAE_01323 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
AAPAMFAE_01324 8.2e-125 thiN 2.7.6.2 H thiamine pyrophosphokinase
AAPAMFAE_01325 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
AAPAMFAE_01326 4e-57 asp S Asp23 family, cell envelope-related function
AAPAMFAE_01327 2e-305 yloV S DAK2 domain fusion protein YloV
AAPAMFAE_01328 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AAPAMFAE_01329 1.1e-181 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
AAPAMFAE_01330 1.8e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
AAPAMFAE_01331 3.1e-192 oppD P Belongs to the ABC transporter superfamily
AAPAMFAE_01332 1.5e-170 oppF P Belongs to the ABC transporter superfamily
AAPAMFAE_01333 4.4e-172 oppB P ABC transporter permease
AAPAMFAE_01334 9.3e-135 oppC P Binding-protein-dependent transport system inner membrane component
AAPAMFAE_01335 5e-307 oppA E ABC transporter substrate-binding protein
AAPAMFAE_01336 0.0 oppA E ABC transporter substrate-binding protein
AAPAMFAE_01337 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
AAPAMFAE_01338 0.0 smc D Required for chromosome condensation and partitioning
AAPAMFAE_01339 8.6e-163 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
AAPAMFAE_01340 3.8e-289 pipD E Dipeptidase
AAPAMFAE_01342 2.4e-133 cysA V ABC transporter, ATP-binding protein
AAPAMFAE_01343 0.0 V FtsX-like permease family
AAPAMFAE_01344 2.2e-260 yfnA E amino acid
AAPAMFAE_01345 4.6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AAPAMFAE_01346 4.5e-229 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AAPAMFAE_01347 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
AAPAMFAE_01348 2.2e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AAPAMFAE_01349 5e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
AAPAMFAE_01350 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
AAPAMFAE_01351 1.4e-214 S SLAP domain
AAPAMFAE_01352 4.9e-122 ung2 3.2.2.27 L Uracil-DNA glycosylase
AAPAMFAE_01353 2e-146 E GDSL-like Lipase/Acylhydrolase family
AAPAMFAE_01354 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AAPAMFAE_01355 3e-38 ynzC S UPF0291 protein
AAPAMFAE_01356 3.3e-30 yneF S Uncharacterised protein family (UPF0154)
AAPAMFAE_01357 0.0 mdlA V ABC transporter
AAPAMFAE_01358 0.0 mdlB V ABC transporter
AAPAMFAE_01359 0.0 pepO 3.4.24.71 O Peptidase family M13
AAPAMFAE_01360 2.9e-108 L Transposase and inactivated derivatives, IS30 family
AAPAMFAE_01361 6.2e-100 L An automated process has identified a potential problem with this gene model
AAPAMFAE_01364 2.8e-145
AAPAMFAE_01365 1.8e-167
AAPAMFAE_01366 2e-263 glnA 6.3.1.2 E glutamine synthetase
AAPAMFAE_01367 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
AAPAMFAE_01368 1.2e-169 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AAPAMFAE_01369 1.5e-65 yqhL P Rhodanese-like protein
AAPAMFAE_01370 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
AAPAMFAE_01371 1.1e-119 gluP 3.4.21.105 S Rhomboid family
AAPAMFAE_01372 2.1e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AAPAMFAE_01373 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
AAPAMFAE_01374 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
AAPAMFAE_01375 0.0 S membrane
AAPAMFAE_01376 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
AAPAMFAE_01377 1.3e-38 S RelB antitoxin
AAPAMFAE_01378 2.6e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
AAPAMFAE_01379 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AAPAMFAE_01380 4.4e-138 fhuC 3.6.3.34 HP abc transporter atp-binding protein
AAPAMFAE_01381 5.1e-149 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AAPAMFAE_01382 2.5e-158 isdE P Periplasmic binding protein
AAPAMFAE_01383 1.8e-122 M Iron Transport-associated domain
AAPAMFAE_01384 3e-09 isdH M Iron Transport-associated domain
AAPAMFAE_01385 2.2e-89
AAPAMFAE_01386 2.3e-110 S SLAP domain
AAPAMFAE_01387 1.1e-49 S Uncharacterized protein conserved in bacteria (DUF2263)
AAPAMFAE_01388 4.4e-83 S An automated process has identified a potential problem with this gene model
AAPAMFAE_01389 1.6e-138 S Protein of unknown function (DUF3100)
AAPAMFAE_01390 2.9e-224 3.5.1.47 S Peptidase dimerisation domain
AAPAMFAE_01391 4.7e-232 Q Imidazolonepropionase and related amidohydrolases
AAPAMFAE_01392 7.7e-310 oppA E ABC transporter
AAPAMFAE_01393 2.4e-147 S Sucrose-6F-phosphate phosphohydrolase
AAPAMFAE_01394 0.0 mco Q Multicopper oxidase
AAPAMFAE_01395 5.7e-25
AAPAMFAE_01396 1.9e-158 metQ1 P Belongs to the nlpA lipoprotein family
AAPAMFAE_01397 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
AAPAMFAE_01398 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AAPAMFAE_01399 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AAPAMFAE_01400 2.7e-199 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AAPAMFAE_01401 1.9e-161 cjaA ET ABC transporter substrate-binding protein
AAPAMFAE_01402 9.7e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AAPAMFAE_01403 2.8e-117 P ABC transporter permease
AAPAMFAE_01404 5.1e-111 papP P ABC transporter, permease protein
AAPAMFAE_01406 3.6e-63 yodB K Transcriptional regulator, HxlR family
AAPAMFAE_01407 2.3e-139 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AAPAMFAE_01408 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
AAPAMFAE_01409 7.6e-164 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AAPAMFAE_01410 1.1e-86 S Aminoacyl-tRNA editing domain
AAPAMFAE_01411 4.7e-224 S SLAP domain
AAPAMFAE_01412 4.5e-32 S CAAX protease self-immunity
AAPAMFAE_01413 5.6e-59 S CAAX protease self-immunity
AAPAMFAE_01414 1.3e-277 arlS 2.7.13.3 T Histidine kinase
AAPAMFAE_01415 1.2e-126 K response regulator
AAPAMFAE_01416 9.4e-98 yceD S Uncharacterized ACR, COG1399
AAPAMFAE_01417 2e-216 ylbM S Belongs to the UPF0348 family
AAPAMFAE_01418 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
AAPAMFAE_01419 1.9e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
AAPAMFAE_01420 1.2e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AAPAMFAE_01421 1.5e-200 yqeH S Ribosome biogenesis GTPase YqeH
AAPAMFAE_01422 2.9e-85 yqeG S HAD phosphatase, family IIIA
AAPAMFAE_01423 1.2e-153 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AAPAMFAE_01424 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AAPAMFAE_01425 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
AAPAMFAE_01426 1.1e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AAPAMFAE_01427 2.4e-98 rihB 3.2.2.1 F Nucleoside
AAPAMFAE_01428 1.3e-103 potB E Binding-protein-dependent transport system inner membrane component
AAPAMFAE_01429 1.3e-108 potC3 E Binding-protein-dependent transport system inner membrane component
AAPAMFAE_01430 1e-134 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AAPAMFAE_01431 1.1e-144 potD2 P ABC transporter
AAPAMFAE_01432 5.5e-250 ade 3.5.4.2 F Adenine deaminase C-terminal domain
AAPAMFAE_01433 9e-162 L DDE superfamily endonuclease
AAPAMFAE_01434 3.2e-39 yyaR K Acetyltransferase (GNAT) domain
AAPAMFAE_01435 1.2e-116 S domain protein
AAPAMFAE_01436 6.6e-149 V ABC transporter
AAPAMFAE_01437 3.8e-75 S Protein of unknown function (DUF3021)
AAPAMFAE_01438 7.8e-76 K LytTr DNA-binding domain
AAPAMFAE_01439 3.5e-91
AAPAMFAE_01440 2.5e-14
AAPAMFAE_01442 2.1e-141 ykuT M mechanosensitive ion channel
AAPAMFAE_01443 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AAPAMFAE_01444 5.1e-36
AAPAMFAE_01445 9.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
AAPAMFAE_01446 9.2e-181 ccpA K catabolite control protein A
AAPAMFAE_01447 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
AAPAMFAE_01448 4.3e-55
AAPAMFAE_01449 1.2e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
AAPAMFAE_01450 1.7e-105 yutD S Protein of unknown function (DUF1027)
AAPAMFAE_01451 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
AAPAMFAE_01452 3.7e-100 S Protein of unknown function (DUF1461)
AAPAMFAE_01453 2.3e-116 dedA S SNARE-like domain protein
AAPAMFAE_01454 2.3e-184 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
AAPAMFAE_01455 7.1e-118 V Abi-like protein
AAPAMFAE_01456 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AAPAMFAE_01457 3.6e-168 dnaI L Primosomal protein DnaI
AAPAMFAE_01458 6.6e-251 dnaB L Replication initiation and membrane attachment
AAPAMFAE_01459 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AAPAMFAE_01460 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AAPAMFAE_01461 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
AAPAMFAE_01462 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AAPAMFAE_01463 2.7e-136 qmcA O prohibitin homologues
AAPAMFAE_01464 3.1e-50 L RelB antitoxin
AAPAMFAE_01465 4.2e-194 S Bacteriocin helveticin-J
AAPAMFAE_01466 4e-35 M Peptidase family M1 domain
AAPAMFAE_01467 4.2e-211 M Peptidase family M1 domain
AAPAMFAE_01468 8.2e-174 S SLAP domain
AAPAMFAE_01469 5.4e-237 mepA V MATE efflux family protein
AAPAMFAE_01470 7.9e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
AAPAMFAE_01471 4.3e-123 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AAPAMFAE_01472 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
AAPAMFAE_01474 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
AAPAMFAE_01475 6.5e-221 ecsB U ABC transporter
AAPAMFAE_01476 2e-135 ecsA V ABC transporter, ATP-binding protein
AAPAMFAE_01477 2.8e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
AAPAMFAE_01478 3.9e-25
AAPAMFAE_01479 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
AAPAMFAE_01480 5.5e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
AAPAMFAE_01481 2.3e-276
AAPAMFAE_01482 5.8e-188 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
AAPAMFAE_01483 0.0 L AAA domain
AAPAMFAE_01484 1.4e-231 yhaO L Ser Thr phosphatase family protein
AAPAMFAE_01485 7.2e-56 yheA S Belongs to the UPF0342 family
AAPAMFAE_01486 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
AAPAMFAE_01487 1.9e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AAPAMFAE_01488 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
AAPAMFAE_01489 2.3e-110 G Phosphoglycerate mutase family
AAPAMFAE_01490 1.2e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
AAPAMFAE_01492 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
AAPAMFAE_01493 9.6e-195 I transferase activity, transferring acyl groups other than amino-acyl groups
AAPAMFAE_01494 9.6e-179 S PFAM Archaeal ATPase
AAPAMFAE_01495 5.5e-42 S cog cog1373
AAPAMFAE_01496 2.2e-15
AAPAMFAE_01497 2e-73 menA 2.5.1.74 H UbiA prenyltransferase family
AAPAMFAE_01498 7.6e-97 3.6.1.55 L NUDIX domain
AAPAMFAE_01499 1.8e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
AAPAMFAE_01500 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
AAPAMFAE_01501 7.9e-99 M ErfK YbiS YcfS YnhG
AAPAMFAE_01502 2.8e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AAPAMFAE_01503 1.4e-242 dacA 3.4.16.4 M Belongs to the peptidase S11 family
AAPAMFAE_01505 4.3e-47 pspC KT PspC domain
AAPAMFAE_01506 8e-299 ytgP S Polysaccharide biosynthesis protein
AAPAMFAE_01507 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
AAPAMFAE_01508 4.9e-122 3.6.1.27 I Acid phosphatase homologues
AAPAMFAE_01509 2.2e-168 K LysR substrate binding domain
AAPAMFAE_01511 1.7e-82 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AAPAMFAE_01512 1.1e-231 ndh 1.6.99.3 C NADH dehydrogenase
AAPAMFAE_01513 1.9e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
AAPAMFAE_01514 1.6e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
AAPAMFAE_01515 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
AAPAMFAE_01516 1.1e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AAPAMFAE_01517 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
AAPAMFAE_01518 3.3e-178 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
AAPAMFAE_01519 2.3e-273 cydA 1.10.3.14 C ubiquinol oxidase
AAPAMFAE_01520 6.9e-145 ybbH_2 K rpiR family
AAPAMFAE_01521 1.2e-196 S Bacterial protein of unknown function (DUF871)
AAPAMFAE_01522 7.8e-155 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AAPAMFAE_01523 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
AAPAMFAE_01524 5.9e-261 qacA EGP Major facilitator Superfamily
AAPAMFAE_01525 5.4e-220 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AAPAMFAE_01528 2.6e-163 psaA P Belongs to the bacterial solute-binding protein 9 family
AAPAMFAE_01531 4.9e-52 UW LPXTG-motif cell wall anchor domain protein
AAPAMFAE_01532 4.6e-133 UW LPXTG-motif cell wall anchor domain protein
AAPAMFAE_01533 9.2e-100 UW LPXTG-motif cell wall anchor domain protein
AAPAMFAE_01534 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AAPAMFAE_01535 7.5e-100 J Acetyltransferase (GNAT) domain
AAPAMFAE_01536 1.4e-110 yjbF S SNARE associated Golgi protein
AAPAMFAE_01537 1.3e-145 I alpha/beta hydrolase fold
AAPAMFAE_01538 1.9e-134 hipB K Helix-turn-helix
AAPAMFAE_01539 1.7e-36 L Transposase
AAPAMFAE_01540 4.2e-23 K Psort location Cytoplasmic, score 9.98
AAPAMFAE_01541 5.8e-43 estA1 3.1.1.85 I alpha/beta hydrolase fold
AAPAMFAE_01542 3.5e-116 P Citrate transporter
AAPAMFAE_01543 7.8e-109 M Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AAPAMFAE_01544 1e-45 K LysR substrate binding domain
AAPAMFAE_01545 1.4e-67 1.3.5.4 C FAD binding domain
AAPAMFAE_01546 1.2e-100 1.3.5.4 C FAD binding domain
AAPAMFAE_01547 9.8e-45 sptS 2.7.13.3 T Histidine kinase
AAPAMFAE_01548 2.4e-40 sptS 2.7.13.3 T Histidine kinase
AAPAMFAE_01549 2.8e-28 sptS 2.7.13.3 T Histidine kinase
AAPAMFAE_01552 8.7e-71 F Nucleoside 2-deoxyribosyltransferase
AAPAMFAE_01553 9.9e-258 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
AAPAMFAE_01554 6.1e-227 L COG3547 Transposase and inactivated derivatives
AAPAMFAE_01555 2.3e-163
AAPAMFAE_01556 0.0 ydgH S MMPL family
AAPAMFAE_01557 6.6e-99 yobS K Bacterial regulatory proteins, tetR family
AAPAMFAE_01558 7.4e-148 3.5.2.6 V Beta-lactamase enzyme family
AAPAMFAE_01559 1.8e-154 corA P CorA-like Mg2+ transporter protein
AAPAMFAE_01560 2.5e-239 G Bacterial extracellular solute-binding protein
AAPAMFAE_01561 4.6e-257 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
AAPAMFAE_01562 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
AAPAMFAE_01563 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
AAPAMFAE_01564 1.9e-203 malK P ATPases associated with a variety of cellular activities
AAPAMFAE_01565 1.8e-283 pipD E Dipeptidase
AAPAMFAE_01566 1.9e-158 endA F DNA RNA non-specific endonuclease
AAPAMFAE_01567 3.2e-183 dnaQ 2.7.7.7 L EXOIII
AAPAMFAE_01568 4.8e-159 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AAPAMFAE_01569 1.5e-115 yviA S Protein of unknown function (DUF421)
AAPAMFAE_01570 1.1e-72 S Protein of unknown function (DUF3290)
AAPAMFAE_01571 7.6e-140 pnuC H nicotinamide mononucleotide transporter
AAPAMFAE_01572 1.1e-294 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AAPAMFAE_01573 0.0 2.7.1.208, 2.7.1.211 G phosphotransferase system
AAPAMFAE_01574 1.9e-158 bglG2 K CAT RNA binding domain
AAPAMFAE_01575 1.5e-35
AAPAMFAE_01576 1.1e-138 S PAS domain
AAPAMFAE_01577 9e-279 V ABC transporter transmembrane region
AAPAMFAE_01578 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
AAPAMFAE_01579 5.7e-132 T Transcriptional regulatory protein, C terminal
AAPAMFAE_01580 7.6e-247 T GHKL domain
AAPAMFAE_01581 4.3e-87 S Peptidase propeptide and YPEB domain
AAPAMFAE_01582 8.9e-102 S Peptidase propeptide and YPEB domain
AAPAMFAE_01583 4.8e-96 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
AAPAMFAE_01584 2.1e-76 yybA 2.3.1.57 K Transcriptional regulator
AAPAMFAE_01585 0.0 oppA3 E ABC transporter, substratebinding protein
AAPAMFAE_01586 1.7e-61 ypaA S Protein of unknown function (DUF1304)
AAPAMFAE_01587 1.5e-101 S Peptidase propeptide and YPEB domain
AAPAMFAE_01588 4.4e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AAPAMFAE_01589 1.3e-170 coaA 2.7.1.33 F Pantothenic acid kinase
AAPAMFAE_01590 2.7e-97 E GDSL-like Lipase/Acylhydrolase
AAPAMFAE_01591 1.2e-74 yjcF S Acetyltransferase (GNAT) domain
AAPAMFAE_01592 1.7e-145 aatB ET ABC transporter substrate-binding protein
AAPAMFAE_01593 8.4e-108 glnQ 3.6.3.21 E ABC transporter
AAPAMFAE_01594 6.5e-111 glnP P ABC transporter permease
AAPAMFAE_01595 0.0 helD 3.6.4.12 L DNA helicase
AAPAMFAE_01596 2.1e-117 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
AAPAMFAE_01597 1.4e-126 pgm3 G Phosphoglycerate mutase family
AAPAMFAE_01598 1.2e-241 S response to antibiotic
AAPAMFAE_01599 9.3e-124
AAPAMFAE_01600 0.0 3.6.3.8 P P-type ATPase
AAPAMFAE_01601 8.7e-66 2.7.1.191 G PTS system fructose IIA component
AAPAMFAE_01602 1e-43
AAPAMFAE_01603 7.7e-09
AAPAMFAE_01604 4.2e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
AAPAMFAE_01605 1.8e-136 glvR K Helix-turn-helix domain, rpiR family
AAPAMFAE_01606 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
AAPAMFAE_01607 5.1e-50
AAPAMFAE_01608 3.1e-46
AAPAMFAE_01609 8.6e-24
AAPAMFAE_01610 1.8e-90 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
AAPAMFAE_01611 5.5e-106 3.2.2.20 K acetyltransferase
AAPAMFAE_01614 7.6e-43 S polysaccharide biosynthetic process
AAPAMFAE_01615 7.9e-88 S Bacterial protein of unknown function (DUF871)
AAPAMFAE_01616 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
AAPAMFAE_01617 4.6e-70 L Transposase DDE domain
AAPAMFAE_01618 1.9e-217 L Transposase
AAPAMFAE_01619 7.3e-159 rafA 3.2.1.22 G alpha-galactosidase
AAPAMFAE_01620 4e-205 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
AAPAMFAE_01621 2.6e-240 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
AAPAMFAE_01622 7.4e-95 scrR K helix_turn _helix lactose operon repressor
AAPAMFAE_01623 4e-15
AAPAMFAE_01624 8.8e-21
AAPAMFAE_01625 3.5e-22
AAPAMFAE_01626 2.6e-180 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
AAPAMFAE_01627 3.3e-117 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
AAPAMFAE_01628 3.4e-163 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AAPAMFAE_01629 2.4e-208 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
AAPAMFAE_01630 4e-223 KQ helix_turn_helix, mercury resistance
AAPAMFAE_01631 3.8e-53
AAPAMFAE_01632 2e-42 S RelB antitoxin
AAPAMFAE_01633 4.9e-69 S HicB_like antitoxin of bacterial toxin-antitoxin system
AAPAMFAE_01634 1.1e-10 N HicA toxin of bacterial toxin-antitoxin,
AAPAMFAE_01635 2.1e-309 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
AAPAMFAE_01637 1.8e-254 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
AAPAMFAE_01638 3.3e-211 glf 5.4.99.9 M UDP-galactopyranose mutase
AAPAMFAE_01639 1.9e-50 GT2 M Glycosyl transferase family 2
AAPAMFAE_01640 1.8e-140 M Glycosyl transferases group 1
AAPAMFAE_01641 2.4e-97 rfbP 2.7.8.6 M Bacterial sugar transferase
AAPAMFAE_01642 8.2e-145 ywqE 3.1.3.48 GM PHP domain protein
AAPAMFAE_01643 1.4e-120 ywqD 2.7.10.1 D Capsular exopolysaccharide family
AAPAMFAE_01644 1e-143 epsB M biosynthesis protein
AAPAMFAE_01645 7.7e-178 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AAPAMFAE_01646 1.3e-47 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
AAPAMFAE_01647 1.3e-41 relB L RelB antitoxin
AAPAMFAE_01649 6.1e-222 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AAPAMFAE_01650 1.7e-174 S Cysteine-rich secretory protein family
AAPAMFAE_01651 4.6e-41
AAPAMFAE_01652 4.4e-118 M NlpC/P60 family
AAPAMFAE_01653 3.9e-136 M NlpC P60 family protein
AAPAMFAE_01654 6.8e-93 M NlpC/P60 family
AAPAMFAE_01655 1.2e-94 gmk2 2.7.4.8 F Guanylate kinase homologues.
AAPAMFAE_01656 9.3e-44
AAPAMFAE_01657 2.9e-279 S O-antigen ligase like membrane protein
AAPAMFAE_01658 3.3e-112
AAPAMFAE_01659 1.9e-77 nrdI F NrdI Flavodoxin like
AAPAMFAE_01660 8.1e-179 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AAPAMFAE_01661 2.5e-68
AAPAMFAE_01662 7.7e-111 yvpB S Peptidase_C39 like family
AAPAMFAE_01663 8.7e-84 S Threonine/Serine exporter, ThrE
AAPAMFAE_01664 4.8e-137 thrE S Putative threonine/serine exporter
AAPAMFAE_01665 3.7e-290 S ABC transporter
AAPAMFAE_01666 2.5e-62
AAPAMFAE_01667 2.2e-102 rimL J Acetyltransferase (GNAT) domain
AAPAMFAE_01668 3e-19
AAPAMFAE_01669 2.4e-60
AAPAMFAE_01670 1.4e-124 S Protein of unknown function (DUF554)
AAPAMFAE_01671 1.2e-209 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AAPAMFAE_01672 0.0 pepF E oligoendopeptidase F
AAPAMFAE_01673 1e-13 Z012_06740 S Fic/DOC family
AAPAMFAE_01674 1.4e-30
AAPAMFAE_01675 6e-70 doc S Prophage maintenance system killer protein
AAPAMFAE_01676 1.8e-217 2.1.1.14 E methionine synthase, vitamin-B12 independent
AAPAMFAE_01677 6.1e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
AAPAMFAE_01678 4.5e-264 lctP C L-lactate permease
AAPAMFAE_01679 2.5e-128 znuB U ABC 3 transport family
AAPAMFAE_01680 8.8e-116 fhuC P ABC transporter
AAPAMFAE_01681 1e-138 psaA P Belongs to the bacterial solute-binding protein 9 family
AAPAMFAE_01682 1.2e-42 K helix_turn_helix, Arsenical Resistance Operon Repressor
AAPAMFAE_01683 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
AAPAMFAE_01684 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
AAPAMFAE_01685 1.8e-136 fruR K DeoR C terminal sensor domain
AAPAMFAE_01686 1.4e-218 natB CP ABC-2 family transporter protein
AAPAMFAE_01687 9.2e-164 natA S ABC transporter, ATP-binding protein
AAPAMFAE_01688 3.6e-08
AAPAMFAE_01689 7.6e-68
AAPAMFAE_01690 4.8e-25
AAPAMFAE_01691 8.2e-31 yozG K Transcriptional regulator
AAPAMFAE_01692 1e-80
AAPAMFAE_01693 2.7e-22
AAPAMFAE_01694 3.8e-31
AAPAMFAE_01696 9.1e-18
AAPAMFAE_01697 2.4e-63
AAPAMFAE_01698 1.9e-30
AAPAMFAE_01699 5.6e-144 K LytTr DNA-binding domain
AAPAMFAE_01700 2.6e-111 2.7.13.3 T GHKL domain
AAPAMFAE_01702 3e-210 S CAAX protease self-immunity
AAPAMFAE_01704 4.3e-68
AAPAMFAE_01705 6.4e-11
AAPAMFAE_01707 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
AAPAMFAE_01708 7.9e-271 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
AAPAMFAE_01709 3e-24
AAPAMFAE_01710 9.5e-26
AAPAMFAE_01711 2.5e-33
AAPAMFAE_01712 6.2e-54 S Enterocin A Immunity
AAPAMFAE_01713 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
AAPAMFAE_01714 7.2e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AAPAMFAE_01715 4.6e-208 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
AAPAMFAE_01716 9.6e-121 K response regulator
AAPAMFAE_01718 0.0 V ABC transporter
AAPAMFAE_01719 7.4e-303 V ABC transporter, ATP-binding protein
AAPAMFAE_01720 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
AAPAMFAE_01721 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
AAPAMFAE_01722 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
AAPAMFAE_01723 7.2e-153 spo0J K Belongs to the ParB family
AAPAMFAE_01724 3.4e-138 soj D Sporulation initiation inhibitor
AAPAMFAE_01725 1.3e-148 noc K Belongs to the ParB family
AAPAMFAE_01726 3.1e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
AAPAMFAE_01727 3e-53 cvpA S Colicin V production protein
AAPAMFAE_01729 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
AAPAMFAE_01730 6e-151 3.1.3.48 T Tyrosine phosphatase family
AAPAMFAE_01731 2.4e-98 azr 1.5.1.36 S NADPH-dependent FMN reductase
AAPAMFAE_01732 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
AAPAMFAE_01733 3.7e-111 K WHG domain
AAPAMFAE_01734 8e-38
AAPAMFAE_01735 2.8e-276 pipD E Dipeptidase
AAPAMFAE_01736 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
AAPAMFAE_01737 4.7e-175 hrtB V ABC transporter permease
AAPAMFAE_01738 3.1e-95 ygfC K Bacterial regulatory proteins, tetR family
AAPAMFAE_01739 5.5e-112 G phosphoglycerate mutase
AAPAMFAE_01740 1.4e-141 aroD S Alpha/beta hydrolase family
AAPAMFAE_01741 3.4e-143 S Belongs to the UPF0246 family
AAPAMFAE_01742 3.4e-120
AAPAMFAE_01743 8.7e-158 2.7.7.12 C Domain of unknown function (DUF4931)
AAPAMFAE_01744 6.9e-191 S Putative peptidoglycan binding domain
AAPAMFAE_01745 4e-16
AAPAMFAE_01746 7.9e-92 liaI S membrane
AAPAMFAE_01747 5.1e-70 XK27_02470 K LytTr DNA-binding domain
AAPAMFAE_01748 8.8e-19 S Sugar efflux transporter for intercellular exchange
AAPAMFAE_01749 2.2e-247 dtpT U amino acid peptide transporter
AAPAMFAE_01750 0.0 pepN 3.4.11.2 E aminopeptidase
AAPAMFAE_01751 2.8e-47 lysM M LysM domain
AAPAMFAE_01752 5.1e-176
AAPAMFAE_01753 1.9e-212 mdtG EGP Major facilitator Superfamily
AAPAMFAE_01754 4.9e-90 ymdB S Macro domain protein
AAPAMFAE_01757 3.3e-147 malG P ABC transporter permease
AAPAMFAE_01758 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
AAPAMFAE_01759 2.3e-213 malE G Bacterial extracellular solute-binding protein
AAPAMFAE_01760 4.7e-210 msmX P Belongs to the ABC transporter superfamily
AAPAMFAE_01761 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
AAPAMFAE_01762 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
AAPAMFAE_01763 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
AAPAMFAE_01764 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
AAPAMFAE_01765 4.8e-78 S PAS domain
AAPAMFAE_01766 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AAPAMFAE_01767 8.2e-179 yvdE K helix_turn _helix lactose operon repressor
AAPAMFAE_01768 6.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
AAPAMFAE_01769 1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AAPAMFAE_01770 2.8e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
AAPAMFAE_01773 3e-140 K Helix-turn-helix XRE-family like proteins
AAPAMFAE_01774 1.7e-46 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
AAPAMFAE_01775 6.5e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
AAPAMFAE_01776 3.7e-67 L RelB antitoxin
AAPAMFAE_01778 3.8e-133 cobQ S glutamine amidotransferase
AAPAMFAE_01779 4.8e-82 M NlpC/P60 family
AAPAMFAE_01781 1.8e-159
AAPAMFAE_01784 3.2e-38
AAPAMFAE_01785 1.6e-166 EG EamA-like transporter family
AAPAMFAE_01786 1.6e-166 EG EamA-like transporter family
AAPAMFAE_01787 2.5e-118 yicL EG EamA-like transporter family
AAPAMFAE_01788 9.7e-107
AAPAMFAE_01789 5.4e-110
AAPAMFAE_01790 3.7e-185 XK27_05540 S DUF218 domain
AAPAMFAE_01791 3.9e-262 yheS_2 S ATPases associated with a variety of cellular activities
AAPAMFAE_01792 1.6e-88
AAPAMFAE_01793 3.8e-52
AAPAMFAE_01794 1.6e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AAPAMFAE_01795 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AAPAMFAE_01796 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AAPAMFAE_01799 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
AAPAMFAE_01800 3.8e-190 asnA 6.3.1.1 F aspartate--ammonia ligase
AAPAMFAE_01801 5.1e-222 steT_1 E amino acid
AAPAMFAE_01802 1.1e-135 puuD S peptidase C26
AAPAMFAE_01803 3e-246 yifK E Amino acid permease
AAPAMFAE_01804 1.3e-233 cycA E Amino acid permease
AAPAMFAE_01805 8e-114 lepB 3.4.21.89 U Belongs to the peptidase S26 family
AAPAMFAE_01806 0.0 clpE O AAA domain (Cdc48 subfamily)
AAPAMFAE_01807 1.2e-168 S Alpha/beta hydrolase of unknown function (DUF915)
AAPAMFAE_01808 4.8e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AAPAMFAE_01809 2.2e-120 XK27_06785 V ABC transporter, ATP-binding protein
AAPAMFAE_01810 0.0 XK27_06780 V ABC transporter permease
AAPAMFAE_01811 1.9e-36
AAPAMFAE_01812 3.5e-291 ytgP S Polysaccharide biosynthesis protein
AAPAMFAE_01813 2.7e-137 lysA2 M Glycosyl hydrolases family 25
AAPAMFAE_01814 2.3e-110 S Protein of unknown function (DUF975)
AAPAMFAE_01815 1.3e-09 S Protein of unknown function (DUF975)
AAPAMFAE_01816 1.1e-175 pbpX2 V Beta-lactamase
AAPAMFAE_01817 2e-244 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AAPAMFAE_01818 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AAPAMFAE_01819 1.6e-238 dltB M MBOAT, membrane-bound O-acyltransferase family
AAPAMFAE_01820 7.7e-288 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AAPAMFAE_01821 5.2e-19 S D-Ala-teichoic acid biosynthesis protein
AAPAMFAE_01822 4.7e-48
AAPAMFAE_01823 5.3e-217 ywhK S Membrane
AAPAMFAE_01824 5.1e-81 ykuL S (CBS) domain
AAPAMFAE_01825 0.0 cadA P P-type ATPase
AAPAMFAE_01826 5.7e-206 napA P Sodium/hydrogen exchanger family
AAPAMFAE_01827 5e-282 V ABC transporter transmembrane region
AAPAMFAE_01828 7.5e-48 S Putative adhesin
AAPAMFAE_01829 3.6e-157 mutR K Helix-turn-helix XRE-family like proteins
AAPAMFAE_01830 1.2e-53
AAPAMFAE_01831 8.3e-122 S CAAX protease self-immunity
AAPAMFAE_01832 9.5e-195 S DUF218 domain
AAPAMFAE_01833 0.0 macB_3 V ABC transporter, ATP-binding protein
AAPAMFAE_01834 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AAPAMFAE_01835 2.9e-248 L Transposase
AAPAMFAE_01836 3.3e-101 S ECF transporter, substrate-specific component
AAPAMFAE_01837 1.8e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
AAPAMFAE_01838 1.5e-200 tcsA S ABC transporter substrate-binding protein PnrA-like
AAPAMFAE_01839 2.6e-283 xylG 3.6.3.17 S ABC transporter
AAPAMFAE_01840 2.1e-197 yufP S Belongs to the binding-protein-dependent transport system permease family
AAPAMFAE_01841 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
AAPAMFAE_01842 4.3e-160 yeaE S Aldo/keto reductase family
AAPAMFAE_01843 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
AAPAMFAE_01844 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
AAPAMFAE_01845 2.1e-123 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
AAPAMFAE_01846 7.2e-72
AAPAMFAE_01847 5.9e-146 cof S haloacid dehalogenase-like hydrolase
AAPAMFAE_01848 2.2e-230 pbuG S permease
AAPAMFAE_01849 3.9e-92 K Helix-turn-helix XRE-family like proteins
AAPAMFAE_01850 5.4e-11 V ATPases associated with a variety of cellular activities
AAPAMFAE_01867 3.5e-75 sip L Belongs to the 'phage' integrase family
AAPAMFAE_01868 1.3e-19
AAPAMFAE_01870 3.1e-16 S Pfam:Peptidase_M78
AAPAMFAE_01871 2.4e-22 K Cro/C1-type HTH DNA-binding domain
AAPAMFAE_01873 6.8e-77 S ORF6C domain
AAPAMFAE_01875 1.7e-08
AAPAMFAE_01879 1.5e-60 S Protein of unknown function (DUF1071)
AAPAMFAE_01880 7.2e-51 K Helix-turn-helix domain
AAPAMFAE_01881 6.3e-60 S IstB-like ATP binding protein
AAPAMFAE_01882 7.1e-13 xre K sequence-specific DNA binding
AAPAMFAE_01888 1.3e-07
AAPAMFAE_01889 2.6e-47 S ASCH domain
AAPAMFAE_01890 7.7e-107 1.8.4.10, 1.8.4.8, 2.7.7.4 EH sulfate reduction
AAPAMFAE_01894 1.6e-110 K Belongs to the N(4) N(6)-methyltransferase family
AAPAMFAE_01896 1.4e-108 L transposase activity
AAPAMFAE_01897 1.1e-212 S Terminase RNAseH like domain
AAPAMFAE_01898 9.9e-233 S Phage portal protein, SPP1 Gp6-like
AAPAMFAE_01899 2e-179 S Phage minor capsid protein 2
AAPAMFAE_01900 1.3e-60 S Phage minor structural protein GP20
AAPAMFAE_01901 7.6e-146 gpG
AAPAMFAE_01902 5.7e-33
AAPAMFAE_01903 5.9e-34 S Minor capsid protein
AAPAMFAE_01904 1.6e-40 S Minor capsid protein
AAPAMFAE_01905 1.9e-34 S Minor capsid protein from bacteriophage
AAPAMFAE_01906 2.1e-88 N domain, Protein
AAPAMFAE_01907 6.2e-33
AAPAMFAE_01908 3.5e-77 S Bacteriophage Gp15 protein
AAPAMFAE_01909 0.0 xkdO D NLP P60 protein
AAPAMFAE_01910 1.1e-107 S phage tail
AAPAMFAE_01911 0.0 S Phage minor structural protein
AAPAMFAE_01913 5.8e-07 S Domain of unknown function (DUF2479)
AAPAMFAE_01915 1.8e-14 GT2,GT4 LM gp58-like protein
AAPAMFAE_01921 2.7e-15
AAPAMFAE_01922 5.7e-97 M hydrolase, family 25
AAPAMFAE_01924 8.9e-217 G Domain of unknown function (DUF3502)
AAPAMFAE_01925 3.2e-143 lplC U Binding-protein-dependent transport system inner membrane component
AAPAMFAE_01926 2.4e-154 U Binding-protein-dependent transport system inner membrane component
AAPAMFAE_01927 1e-243 3.2.1.52 GH20 G Glycosyl hydrolase family 20, catalytic domain
AAPAMFAE_01928 2.2e-46 3.4.21.102 M Peptidase family S41
AAPAMFAE_01929 4.1e-264 mdlB V ABC transporter
AAPAMFAE_01930 4.6e-276 mdlA V ABC transporter
AAPAMFAE_01931 0.0 mngB 2.3.1.204, 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
AAPAMFAE_01932 9.3e-202 S Metal-independent alpha-mannosidase (GH125)
AAPAMFAE_01933 4.7e-127 rliB K helix_turn_helix gluconate operon transcriptional repressor
AAPAMFAE_01934 8.9e-279 ypdD G Glycosyl hydrolase family 92
AAPAMFAE_01935 1.5e-197 L COG2826 Transposase and inactivated derivatives, IS30 family
AAPAMFAE_01936 1.2e-21 gepA K Protein of unknown function (DUF4065)
AAPAMFAE_01937 3.5e-89 K UTRA domain
AAPAMFAE_01938 1.9e-221 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
AAPAMFAE_01939 1.5e-164 ptcC1 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AAPAMFAE_01940 2.1e-38 acfD M Membrane
AAPAMFAE_01941 7.1e-144 S response to antibiotic
AAPAMFAE_01942 1.5e-191
AAPAMFAE_01943 2.7e-126 S zinc-ribbon domain
AAPAMFAE_01944 9.8e-77 usp6 T universal stress protein
AAPAMFAE_01945 8.4e-39
AAPAMFAE_01946 7.4e-239 rarA L recombination factor protein RarA
AAPAMFAE_01947 9.9e-85 yueI S Protein of unknown function (DUF1694)
AAPAMFAE_01950 7e-11 mrr L restriction endonuclease
AAPAMFAE_01951 3e-15 mrr L restriction endonuclease
AAPAMFAE_01953 3e-71
AAPAMFAE_01954 2.5e-15
AAPAMFAE_01956 1.2e-46
AAPAMFAE_01957 8.8e-111 K LysR family
AAPAMFAE_01958 2.7e-63 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AAPAMFAE_01959 2.2e-12 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AAPAMFAE_01960 3.8e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
AAPAMFAE_01961 6.5e-55 dhaM 2.7.1.121 S PTS system fructose IIA component
AAPAMFAE_01962 8.5e-94 dhaL 2.7.1.121 S Dak2
AAPAMFAE_01963 2.9e-174 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
AAPAMFAE_01964 0.0 O Belongs to the peptidase S8 family
AAPAMFAE_01965 4.5e-81 coaA 2.7.1.33 F Pantothenic acid kinase
AAPAMFAE_01966 1.4e-75 S ECF transporter, substrate-specific component
AAPAMFAE_01967 1.8e-55 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AAPAMFAE_01968 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
AAPAMFAE_01969 3.3e-265 2.8.3.1 I Coenzyme A transferase
AAPAMFAE_01970 1e-89 S Lysin motif
AAPAMFAE_01971 8.3e-124 L Replication initiation factor
AAPAMFAE_01972 9.2e-40 L Single-strand binding protein family
AAPAMFAE_01973 3.9e-100 L Phage integrase, N-terminal SAM-like domain
AAPAMFAE_01975 7.9e-20
AAPAMFAE_01976 3e-10 S Protein of unknown function (DUF2922)
AAPAMFAE_01978 1.1e-23
AAPAMFAE_01980 5.2e-27
AAPAMFAE_01981 3.5e-48 repA S Replication initiator protein A
AAPAMFAE_01982 2.9e-252 E Amino acid permease
AAPAMFAE_01983 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
AAPAMFAE_01984 9.8e-109 yisY 1.11.1.10 S Alpha/beta hydrolase family
AAPAMFAE_01985 8.7e-107 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
AAPAMFAE_01986 6.1e-111 crt 4.2.1.17 I Enoyl-CoA hydratase/isomerase
AAPAMFAE_01987 1.9e-151 fabK 1.3.1.9 S Nitronate monooxygenase
AAPAMFAE_01988 1.9e-272 1.3.5.4 C FMN_bind
AAPAMFAE_01989 8.3e-109 K LysR family
AAPAMFAE_01990 2.1e-88 yesM 2.7.13.3 T Histidine kinase
AAPAMFAE_01991 3.3e-107 yesN K helix_turn_helix, arabinose operon control protein
AAPAMFAE_01999 1.4e-223 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
AAPAMFAE_02000 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
AAPAMFAE_02001 1.5e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AAPAMFAE_02002 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AAPAMFAE_02003 1.7e-29 secG U Preprotein translocase
AAPAMFAE_02004 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
AAPAMFAE_02005 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
AAPAMFAE_02006 1.2e-139 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
AAPAMFAE_02007 1e-89 cps1B GT2,GT4 M Glycosyl transferases group 1
AAPAMFAE_02009 1.4e-192 L Transposase and inactivated derivatives, IS30 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)