ORF_ID e_value Gene_name EC_number CAZy COGs Description
PPBMDIDC_00001 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
PPBMDIDC_00002 1.4e-36 S Cytochrome B5
PPBMDIDC_00003 2.3e-167 arbZ I Phosphate acyltransferases
PPBMDIDC_00004 6e-182 arbY M Glycosyl transferase family 8
PPBMDIDC_00005 3.4e-185 arbY M Glycosyl transferase family 8
PPBMDIDC_00006 1e-156 arbx M Glycosyl transferase family 8
PPBMDIDC_00007 1.4e-149 arbV 2.3.1.51 I Acyl-transferase
PPBMDIDC_00009 4.9e-34
PPBMDIDC_00011 4.8e-131 K response regulator
PPBMDIDC_00012 7.2e-304 vicK 2.7.13.3 T Histidine kinase
PPBMDIDC_00013 2.7e-252 yycH S YycH protein
PPBMDIDC_00014 6.5e-148 yycI S YycH protein
PPBMDIDC_00015 8.2e-148 vicX 3.1.26.11 S domain protein
PPBMDIDC_00016 3.3e-151 htrA 3.4.21.107 O serine protease
PPBMDIDC_00017 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PPBMDIDC_00018 1.1e-103 G Peptidase_C39 like family
PPBMDIDC_00019 1.6e-176 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PPBMDIDC_00020 3.3e-78 P Cobalt transport protein
PPBMDIDC_00021 1.8e-248 cbiO1 S ABC transporter, ATP-binding protein
PPBMDIDC_00022 7.9e-174 K helix_turn_helix, arabinose operon control protein
PPBMDIDC_00023 2.6e-158 htpX O Belongs to the peptidase M48B family
PPBMDIDC_00024 1e-96 lemA S LemA family
PPBMDIDC_00025 2.8e-194 ybiR P Citrate transporter
PPBMDIDC_00026 2.7e-70 S Iron-sulphur cluster biosynthesis
PPBMDIDC_00027 4.6e-308 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PPBMDIDC_00028 1.2e-17
PPBMDIDC_00029 3.8e-111
PPBMDIDC_00031 5.4e-44 ydaM M Glycosyl transferase
PPBMDIDC_00032 1.5e-161 ydaM M Glycosyl transferase
PPBMDIDC_00033 6.2e-178 G Glycosyl hydrolases family 8
PPBMDIDC_00034 1.4e-121 yfbR S HD containing hydrolase-like enzyme
PPBMDIDC_00035 1.5e-155 L HNH nucleases
PPBMDIDC_00036 1.2e-137 S Protein of unknown function (DUF805)
PPBMDIDC_00037 8.1e-137 glnQ E ABC transporter, ATP-binding protein
PPBMDIDC_00038 1.3e-290 glnP P ABC transporter permease
PPBMDIDC_00039 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PPBMDIDC_00040 2e-64 yeaO S Protein of unknown function, DUF488
PPBMDIDC_00041 9.6e-125 terC P Integral membrane protein TerC family
PPBMDIDC_00042 3.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PPBMDIDC_00043 1e-133 cobB K SIR2 family
PPBMDIDC_00044 4.2e-86
PPBMDIDC_00045 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PPBMDIDC_00046 1.6e-182 S Alpha/beta hydrolase of unknown function (DUF915)
PPBMDIDC_00047 2.7e-148 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PPBMDIDC_00048 4.4e-140 ypuA S Protein of unknown function (DUF1002)
PPBMDIDC_00049 2.9e-156 epsV 2.7.8.12 S glycosyl transferase family 2
PPBMDIDC_00050 7.3e-126 S Alpha/beta hydrolase family
PPBMDIDC_00051 1e-53
PPBMDIDC_00052 9.7e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PPBMDIDC_00053 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
PPBMDIDC_00054 2.8e-135
PPBMDIDC_00055 1.3e-258 glnPH2 P ABC transporter permease
PPBMDIDC_00056 3.8e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PPBMDIDC_00057 5.8e-225 S Cysteine-rich secretory protein family
PPBMDIDC_00058 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PPBMDIDC_00059 3.1e-112
PPBMDIDC_00060 2.2e-202 yibE S overlaps another CDS with the same product name
PPBMDIDC_00061 3.4e-130 yibF S overlaps another CDS with the same product name
PPBMDIDC_00062 1.2e-149 I alpha/beta hydrolase fold
PPBMDIDC_00063 0.0 G Belongs to the glycosyl hydrolase 31 family
PPBMDIDC_00064 3.5e-216 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PPBMDIDC_00065 9.8e-46
PPBMDIDC_00066 1.5e-61 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PPBMDIDC_00067 2.9e-273 S Archaea bacterial proteins of unknown function
PPBMDIDC_00069 3.3e-250 L Probable transposase
PPBMDIDC_00070 4.8e-111 L Resolvase, N terminal domain
PPBMDIDC_00071 1.1e-167 yjjC V ABC transporter
PPBMDIDC_00072 2.7e-291 M Exporter of polyketide antibiotics
PPBMDIDC_00073 1.1e-113 K Transcriptional regulator
PPBMDIDC_00074 6.1e-100 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PPBMDIDC_00075 3.6e-90 ntd 2.4.2.6 F Nucleoside
PPBMDIDC_00076 8.6e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PPBMDIDC_00077 2.6e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
PPBMDIDC_00078 1.5e-83 uspA T universal stress protein
PPBMDIDC_00079 1.2e-150 phnD P Phosphonate ABC transporter
PPBMDIDC_00080 4.1e-136 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PPBMDIDC_00081 8.8e-118 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PPBMDIDC_00082 2.2e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PPBMDIDC_00083 2.1e-105 tag 3.2.2.20 L glycosylase
PPBMDIDC_00084 3.9e-84
PPBMDIDC_00085 3.4e-274 S Calcineurin-like phosphoesterase
PPBMDIDC_00086 0.0 asnB 6.3.5.4 E Asparagine synthase
PPBMDIDC_00087 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
PPBMDIDC_00089 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PPBMDIDC_00090 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PPBMDIDC_00091 4.5e-103 S Iron-sulfur cluster assembly protein
PPBMDIDC_00092 1.5e-230 XK27_04775 S PAS domain
PPBMDIDC_00093 1.6e-211 yttB EGP Major facilitator Superfamily
PPBMDIDC_00094 0.0 pepO 3.4.24.71 O Peptidase family M13
PPBMDIDC_00095 0.0 kup P Transport of potassium into the cell
PPBMDIDC_00096 1.2e-73
PPBMDIDC_00097 2.1e-45 S PFAM Archaeal ATPase
PPBMDIDC_00098 2.3e-10 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PPBMDIDC_00100 5.5e-30
PPBMDIDC_00101 9.5e-40 S Protein of unknown function (DUF2922)
PPBMDIDC_00102 5.5e-91 S SLAP domain
PPBMDIDC_00103 6.2e-189 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PPBMDIDC_00104 7.8e-73
PPBMDIDC_00106 2.5e-86 K DNA-templated transcription, initiation
PPBMDIDC_00107 1.1e-25
PPBMDIDC_00108 8.9e-151 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PPBMDIDC_00109 1e-19 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PPBMDIDC_00110 4.9e-141 S SLAP domain
PPBMDIDC_00111 8.8e-81 L transposase, IS605 OrfB family
PPBMDIDC_00112 4.2e-74 K Copper transport repressor CopY TcrY
PPBMDIDC_00113 0.0 copB 3.6.3.4 P P-type ATPase
PPBMDIDC_00115 5e-100 cadD P Cadmium resistance transporter
PPBMDIDC_00116 1.8e-43 L transposase activity
PPBMDIDC_00117 6.6e-213 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PPBMDIDC_00118 2.5e-208 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PPBMDIDC_00119 0.0 yjbQ P TrkA C-terminal domain protein
PPBMDIDC_00120 1.8e-116 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PPBMDIDC_00121 1e-176 S Oxidoreductase family, NAD-binding Rossmann fold
PPBMDIDC_00122 9.5e-144
PPBMDIDC_00123 2.9e-134
PPBMDIDC_00124 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PPBMDIDC_00125 1.6e-97 G Aldose 1-epimerase
PPBMDIDC_00126 2.1e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PPBMDIDC_00127 3.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PPBMDIDC_00128 0.0 XK27_08315 M Sulfatase
PPBMDIDC_00129 1.6e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PPBMDIDC_00130 3.1e-54
PPBMDIDC_00135 5e-40
PPBMDIDC_00136 6.3e-117 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PPBMDIDC_00138 5.3e-28
PPBMDIDC_00140 1e-108 repB EP Plasmid replication protein
PPBMDIDC_00142 8.3e-22
PPBMDIDC_00143 6.7e-162 L Belongs to the 'phage' integrase family
PPBMDIDC_00144 1.6e-257 pepC 3.4.22.40 E aminopeptidase
PPBMDIDC_00145 2.6e-123 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PPBMDIDC_00146 5e-301 oppA E ABC transporter, substratebinding protein
PPBMDIDC_00147 5e-161 2.7.7.12 C Domain of unknown function (DUF4931)
PPBMDIDC_00148 2e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PPBMDIDC_00149 3.4e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PPBMDIDC_00150 0.0 kup P Transport of potassium into the cell
PPBMDIDC_00151 2.8e-176 rihB 3.2.2.1 F Nucleoside
PPBMDIDC_00152 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
PPBMDIDC_00153 4.7e-154 S hydrolase
PPBMDIDC_00154 1.9e-59 S Enterocin A Immunity
PPBMDIDC_00155 3.7e-137 glcR K DeoR C terminal sensor domain
PPBMDIDC_00156 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PPBMDIDC_00157 1e-151 rssA S Phospholipase, patatin family
PPBMDIDC_00158 4.9e-148 S hydrolase
PPBMDIDC_00159 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PPBMDIDC_00160 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
PPBMDIDC_00161 7.8e-80
PPBMDIDC_00162 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PPBMDIDC_00163 2.1e-39
PPBMDIDC_00164 6.6e-119 C nitroreductase
PPBMDIDC_00165 2.2e-249 yhdP S Transporter associated domain
PPBMDIDC_00166 1.3e-102 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PPBMDIDC_00167 0.0 1.3.5.4 C FAD binding domain
PPBMDIDC_00168 3.2e-87 L PFAM transposase, IS4 family protein
PPBMDIDC_00169 0.0 1.3.5.4 C FAD binding domain
PPBMDIDC_00170 2.2e-230 potE E amino acid
PPBMDIDC_00171 1.4e-130 M Glycosyl hydrolases family 25
PPBMDIDC_00172 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
PPBMDIDC_00173 8e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPBMDIDC_00175 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PPBMDIDC_00176 3.1e-87 gtcA S Teichoic acid glycosylation protein
PPBMDIDC_00177 4.1e-80 fld C Flavodoxin
PPBMDIDC_00178 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
PPBMDIDC_00179 5.2e-162 yihY S Belongs to the UPF0761 family
PPBMDIDC_00180 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PPBMDIDC_00181 2.3e-215 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PPBMDIDC_00182 1.1e-215 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PPBMDIDC_00183 1.9e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PPBMDIDC_00184 9.4e-46
PPBMDIDC_00185 2e-177 D Alpha beta
PPBMDIDC_00186 1.2e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PPBMDIDC_00187 8.6e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
PPBMDIDC_00188 1.6e-85
PPBMDIDC_00189 1.6e-74
PPBMDIDC_00190 1.1e-140 hlyX S Transporter associated domain
PPBMDIDC_00191 2.5e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PPBMDIDC_00192 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
PPBMDIDC_00193 0.0 clpE O Belongs to the ClpA ClpB family
PPBMDIDC_00194 5.3e-26
PPBMDIDC_00195 8.5e-41 ptsH G phosphocarrier protein HPR
PPBMDIDC_00196 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PPBMDIDC_00197 6.1e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PPBMDIDC_00198 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PPBMDIDC_00199 5.8e-160 coiA 3.6.4.12 S Competence protein
PPBMDIDC_00200 1.2e-114 yjbH Q Thioredoxin
PPBMDIDC_00201 3.6e-111 yjbK S CYTH
PPBMDIDC_00202 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
PPBMDIDC_00203 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PPBMDIDC_00204 1.9e-172 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PPBMDIDC_00205 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PPBMDIDC_00206 2.5e-92 S SNARE associated Golgi protein
PPBMDIDC_00207 1.1e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PPBMDIDC_00208 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PPBMDIDC_00209 2.6e-214 yubA S AI-2E family transporter
PPBMDIDC_00210 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PPBMDIDC_00211 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
PPBMDIDC_00212 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PPBMDIDC_00213 2.6e-222 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PPBMDIDC_00214 3.9e-237 S Peptidase M16
PPBMDIDC_00215 1.4e-133 IQ Enoyl-(Acyl carrier protein) reductase
PPBMDIDC_00216 5.2e-97 ymfM S Helix-turn-helix domain
PPBMDIDC_00217 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PPBMDIDC_00218 8.5e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PPBMDIDC_00219 4.3e-220 rny S Endoribonuclease that initiates mRNA decay
PPBMDIDC_00220 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
PPBMDIDC_00221 4.3e-118 yvyE 3.4.13.9 S YigZ family
PPBMDIDC_00222 3e-245 comFA L Helicase C-terminal domain protein
PPBMDIDC_00223 3.1e-135 comFC S Competence protein
PPBMDIDC_00224 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PPBMDIDC_00225 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PPBMDIDC_00226 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PPBMDIDC_00227 5.1e-17
PPBMDIDC_00228 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PPBMDIDC_00229 1.1e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PPBMDIDC_00230 3.9e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PPBMDIDC_00231 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PPBMDIDC_00232 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PPBMDIDC_00233 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PPBMDIDC_00234 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PPBMDIDC_00235 4.1e-90 S Short repeat of unknown function (DUF308)
PPBMDIDC_00236 6.2e-165 rapZ S Displays ATPase and GTPase activities
PPBMDIDC_00237 1.2e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PPBMDIDC_00238 2.1e-171 whiA K May be required for sporulation
PPBMDIDC_00239 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PPBMDIDC_00240 0.0 S SH3-like domain
PPBMDIDC_00241 4.9e-111 ybbL S ABC transporter, ATP-binding protein
PPBMDIDC_00242 1.6e-129 ybbM S Uncharacterised protein family (UPF0014)
PPBMDIDC_00243 2.3e-96 S Domain of unknown function (DUF4811)
PPBMDIDC_00244 6.4e-263 lmrB EGP Major facilitator Superfamily
PPBMDIDC_00245 1.4e-77 K MerR HTH family regulatory protein
PPBMDIDC_00246 5.4e-144 S Cysteine-rich secretory protein family
PPBMDIDC_00247 9.2e-275 ycaM E amino acid
PPBMDIDC_00248 9.8e-291
PPBMDIDC_00250 1.5e-189 cggR K Putative sugar-binding domain
PPBMDIDC_00251 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PPBMDIDC_00252 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PPBMDIDC_00253 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PPBMDIDC_00254 1.2e-94
PPBMDIDC_00255 1.4e-156 ycsE S Sucrose-6F-phosphate phosphohydrolase
PPBMDIDC_00256 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PPBMDIDC_00257 1.2e-180 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PPBMDIDC_00258 1.4e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PPBMDIDC_00259 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
PPBMDIDC_00260 2e-163 murB 1.3.1.98 M Cell wall formation
PPBMDIDC_00261 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PPBMDIDC_00262 1.6e-130 potB P ABC transporter permease
PPBMDIDC_00263 2.1e-127 potC P ABC transporter permease
PPBMDIDC_00264 4.7e-207 potD P ABC transporter
PPBMDIDC_00265 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PPBMDIDC_00266 7.5e-172 ybbR S YbbR-like protein
PPBMDIDC_00267 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PPBMDIDC_00268 6.4e-148 S hydrolase
PPBMDIDC_00269 6.7e-75 K Penicillinase repressor
PPBMDIDC_00270 1.6e-118
PPBMDIDC_00271 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PPBMDIDC_00272 1.3e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PPBMDIDC_00273 1.7e-143 licT K CAT RNA binding domain
PPBMDIDC_00274 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
PPBMDIDC_00275 2.6e-301 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPBMDIDC_00276 9.4e-175 D Alpha beta
PPBMDIDC_00277 2.5e-305 E Amino acid permease
PPBMDIDC_00279 4.9e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PPBMDIDC_00280 2.7e-109 ylbE GM NAD(P)H-binding
PPBMDIDC_00281 2e-94 S VanZ like family
PPBMDIDC_00282 8.9e-133 yebC K Transcriptional regulatory protein
PPBMDIDC_00283 8.4e-179 comGA NU Type II IV secretion system protein
PPBMDIDC_00284 2.7e-172 comGB NU type II secretion system
PPBMDIDC_00285 3.1e-43 comGC U competence protein ComGC
PPBMDIDC_00286 7.4e-71
PPBMDIDC_00287 2.3e-41
PPBMDIDC_00288 1.9e-76 comGF U Putative Competence protein ComGF
PPBMDIDC_00289 1.6e-21
PPBMDIDC_00290 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
PPBMDIDC_00291 2.4e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PPBMDIDC_00293 5.3e-16 M Protein of unknown function (DUF3737)
PPBMDIDC_00294 4.5e-78 M Protein of unknown function (DUF3737)
PPBMDIDC_00295 3.2e-225 patB 4.4.1.8 E Aminotransferase, class I
PPBMDIDC_00296 6.5e-192 manA 5.3.1.8 G mannose-6-phosphate isomerase
PPBMDIDC_00297 7.7e-67 S SdpI/YhfL protein family
PPBMDIDC_00298 2e-129 K Transcriptional regulatory protein, C terminal
PPBMDIDC_00299 2.1e-266 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
PPBMDIDC_00300 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PPBMDIDC_00301 3.8e-105 vanZ V VanZ like family
PPBMDIDC_00302 2.2e-254 pgi 5.3.1.9 G Belongs to the GPI family
PPBMDIDC_00303 1.5e-218 EGP Major facilitator Superfamily
PPBMDIDC_00304 1e-195 ampC V Beta-lactamase
PPBMDIDC_00307 1.9e-261 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PPBMDIDC_00308 1.4e-112 tdk 2.7.1.21 F thymidine kinase
PPBMDIDC_00309 6.9e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PPBMDIDC_00310 2.5e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PPBMDIDC_00311 7e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PPBMDIDC_00312 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PPBMDIDC_00313 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PPBMDIDC_00314 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PPBMDIDC_00315 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PPBMDIDC_00316 2e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PPBMDIDC_00317 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PPBMDIDC_00318 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PPBMDIDC_00319 9.7e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PPBMDIDC_00320 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PPBMDIDC_00321 4.1e-31 ywzB S Protein of unknown function (DUF1146)
PPBMDIDC_00322 2.5e-178 mbl D Cell shape determining protein MreB Mrl
PPBMDIDC_00323 2e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PPBMDIDC_00324 1.5e-33 S Protein of unknown function (DUF2969)
PPBMDIDC_00325 1.2e-216 rodA D Belongs to the SEDS family
PPBMDIDC_00326 4e-78 usp6 T universal stress protein
PPBMDIDC_00327 3.2e-38
PPBMDIDC_00328 5.4e-172 S Uncharacterised protein family (UPF0236)
PPBMDIDC_00329 1.8e-237 rarA L recombination factor protein RarA
PPBMDIDC_00330 9.9e-85 yueI S Protein of unknown function (DUF1694)
PPBMDIDC_00331 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PPBMDIDC_00332 6.2e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PPBMDIDC_00333 4.3e-214 iscS2 2.8.1.7 E Aminotransferase class V
PPBMDIDC_00334 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PPBMDIDC_00335 1.5e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PPBMDIDC_00336 5.8e-121 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PPBMDIDC_00337 9.1e-28 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PPBMDIDC_00338 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
PPBMDIDC_00339 1.8e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PPBMDIDC_00340 2.4e-92 S Protein of unknown function (DUF3990)
PPBMDIDC_00341 6.5e-44
PPBMDIDC_00343 0.0 3.6.3.8 P P-type ATPase
PPBMDIDC_00344 8.1e-147
PPBMDIDC_00345 1.9e-26 K Helix-turn-helix domain
PPBMDIDC_00346 3.3e-49 K Helix-turn-helix domain
PPBMDIDC_00347 5.9e-32 K Helix-turn-helix domain
PPBMDIDC_00348 4.3e-16 1.3.5.4 C FAD binding domain
PPBMDIDC_00349 2.4e-62 S Phage derived protein Gp49-like (DUF891)
PPBMDIDC_00350 3e-41 K Helix-turn-helix XRE-family like proteins
PPBMDIDC_00351 4.2e-68
PPBMDIDC_00352 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PPBMDIDC_00353 1e-240 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PPBMDIDC_00354 5.7e-126 S Haloacid dehalogenase-like hydrolase
PPBMDIDC_00355 2.3e-108 radC L DNA repair protein
PPBMDIDC_00356 1.8e-176 mreB D cell shape determining protein MreB
PPBMDIDC_00357 6.7e-148 mreC M Involved in formation and maintenance of cell shape
PPBMDIDC_00358 1.2e-94 mreD
PPBMDIDC_00360 6.4e-54 S Protein of unknown function (DUF3397)
PPBMDIDC_00361 3.1e-77 mraZ K Belongs to the MraZ family
PPBMDIDC_00362 3.8e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PPBMDIDC_00363 1.8e-54 ftsL D Cell division protein FtsL
PPBMDIDC_00364 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PPBMDIDC_00365 1.1e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PPBMDIDC_00366 1.9e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PPBMDIDC_00367 4.4e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PPBMDIDC_00368 4.1e-153 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PPBMDIDC_00369 2.6e-247 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PPBMDIDC_00370 1.8e-219 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PPBMDIDC_00371 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PPBMDIDC_00372 1.7e-45 yggT S YGGT family
PPBMDIDC_00373 6.7e-150 ylmH S S4 domain protein
PPBMDIDC_00374 2.8e-74 gpsB D DivIVA domain protein
PPBMDIDC_00375 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PPBMDIDC_00376 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
PPBMDIDC_00377 9.8e-103 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PPBMDIDC_00378 2.1e-38
PPBMDIDC_00379 2.6e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PPBMDIDC_00380 3.5e-216 iscS 2.8.1.7 E Aminotransferase class V
PPBMDIDC_00381 2.2e-57 XK27_04120 S Putative amino acid metabolism
PPBMDIDC_00382 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PPBMDIDC_00383 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PPBMDIDC_00384 9.1e-105 S Repeat protein
PPBMDIDC_00385 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PPBMDIDC_00386 1e-293 L Nuclease-related domain
PPBMDIDC_00387 2.6e-180 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PPBMDIDC_00388 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PPBMDIDC_00389 4.6e-32 ykzG S Belongs to the UPF0356 family
PPBMDIDC_00390 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PPBMDIDC_00391 0.0 typA T GTP-binding protein TypA
PPBMDIDC_00392 1.2e-211 ftsW D Belongs to the SEDS family
PPBMDIDC_00393 1.5e-53 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PPBMDIDC_00394 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PPBMDIDC_00395 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PPBMDIDC_00396 3.3e-189 ylbL T Belongs to the peptidase S16 family
PPBMDIDC_00397 7e-79 comEA L Competence protein ComEA
PPBMDIDC_00398 0.0 comEC S Competence protein ComEC
PPBMDIDC_00399 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
PPBMDIDC_00400 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
PPBMDIDC_00401 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PPBMDIDC_00402 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PPBMDIDC_00403 8.3e-151
PPBMDIDC_00404 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PPBMDIDC_00405 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PPBMDIDC_00406 7.7e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PPBMDIDC_00407 3.7e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
PPBMDIDC_00408 1.3e-22 yjeM E Amino Acid
PPBMDIDC_00409 1.3e-29 yjeM E Amino acid permease
PPBMDIDC_00410 2.1e-64 yjeM E Amino acid permease
PPBMDIDC_00411 9.9e-191 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PPBMDIDC_00412 3.9e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PPBMDIDC_00413 5.1e-248 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PPBMDIDC_00414 9.7e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PPBMDIDC_00415 1.1e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PPBMDIDC_00416 2.8e-176 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PPBMDIDC_00417 2.7e-143 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PPBMDIDC_00418 3.8e-218 aspC 2.6.1.1 E Aminotransferase
PPBMDIDC_00419 1.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PPBMDIDC_00420 5e-196 pbpX1 V Beta-lactamase
PPBMDIDC_00421 4.6e-299 I Protein of unknown function (DUF2974)
PPBMDIDC_00422 3.6e-39 C FMN_bind
PPBMDIDC_00423 1.9e-81
PPBMDIDC_00424 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PPBMDIDC_00425 1.3e-72 alkD L DNA alkylation repair enzyme
PPBMDIDC_00426 2.4e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPBMDIDC_00427 3.7e-128 K UTRA domain
PPBMDIDC_00428 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PPBMDIDC_00429 8.7e-60 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PPBMDIDC_00430 3.2e-71 S Domain of unknown function (DUF3284)
PPBMDIDC_00431 1.6e-301 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPBMDIDC_00432 2.5e-119 gmuR K UTRA
PPBMDIDC_00433 3.7e-223 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPBMDIDC_00434 3.4e-274 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPBMDIDC_00435 5.4e-137 ypbG 2.7.1.2 GK ROK family
PPBMDIDC_00436 3.2e-44 C nitroreductase
PPBMDIDC_00437 1.3e-90 S Domain of unknown function (DUF4767)
PPBMDIDC_00438 6e-241 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PPBMDIDC_00439 1.6e-146 yitS S Uncharacterised protein, DegV family COG1307
PPBMDIDC_00440 2.2e-102 3.6.1.27 I Acid phosphatase homologues
PPBMDIDC_00441 2.5e-191 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PPBMDIDC_00443 1.2e-178 MA20_14895 S Conserved hypothetical protein 698
PPBMDIDC_00444 1.2e-85 dps P Belongs to the Dps family
PPBMDIDC_00445 1.1e-14 K Acetyltransferase (GNAT) domain
PPBMDIDC_00446 6.4e-14 1.3.5.4 C succinate dehydrogenase
PPBMDIDC_00448 3.3e-101 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PPBMDIDC_00449 9.9e-71 S Putative adhesin
PPBMDIDC_00450 6.7e-75 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
PPBMDIDC_00451 3.6e-236 mepA V MATE efflux family protein
PPBMDIDC_00452 2.1e-67 M Peptidase family M1 domain
PPBMDIDC_00453 9.4e-150
PPBMDIDC_00455 1.6e-246 ydaM M Glycosyl transferase
PPBMDIDC_00456 8e-202 G Glycosyl hydrolases family 8
PPBMDIDC_00457 1.9e-69 L Transposase and inactivated derivatives, IS30 family
PPBMDIDC_00458 1.7e-88 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PPBMDIDC_00459 7.7e-31 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PPBMDIDC_00460 7.3e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PPBMDIDC_00461 6.3e-229 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PPBMDIDC_00462 4e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PPBMDIDC_00463 6.9e-198 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PPBMDIDC_00464 9e-117 lsa S ABC transporter
PPBMDIDC_00465 1.6e-112 S Protein of unknown function (DUF1211)
PPBMDIDC_00466 5.7e-77 ltrA S Bacterial low temperature requirement A protein (LtrA)
PPBMDIDC_00467 2e-117 3.6.1.55 F NUDIX domain
PPBMDIDC_00468 1.1e-245 brnQ U Component of the transport system for branched-chain amino acids
PPBMDIDC_00469 0.0 L Plasmid pRiA4b ORF-3-like protein
PPBMDIDC_00470 5e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PPBMDIDC_00471 1.6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
PPBMDIDC_00472 2.5e-08 S Protein of unknown function (DUF3021)
PPBMDIDC_00473 1.3e-117 rbtT P Major Facilitator Superfamily
PPBMDIDC_00474 9e-206 XK27_00915 C Luciferase-like monooxygenase
PPBMDIDC_00475 6.5e-87 K GNAT family
PPBMDIDC_00476 9.8e-123 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PPBMDIDC_00478 1.5e-36
PPBMDIDC_00479 1.4e-287 P ABC transporter
PPBMDIDC_00480 3e-282 V ABC-type multidrug transport system, ATPase and permease components
PPBMDIDC_00481 1.7e-249 yifK E Amino acid permease
PPBMDIDC_00482 4.1e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PPBMDIDC_00483 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PPBMDIDC_00484 0.0 aha1 P E1-E2 ATPase
PPBMDIDC_00485 1.3e-176 F DNA/RNA non-specific endonuclease
PPBMDIDC_00486 7.7e-160 metQ2 P Belongs to the nlpA lipoprotein family
PPBMDIDC_00487 3.4e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PPBMDIDC_00488 2e-73 metI P ABC transporter permease
PPBMDIDC_00489 2e-266 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PPBMDIDC_00490 1.9e-261 frdC 1.3.5.4 C FAD binding domain
PPBMDIDC_00491 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PPBMDIDC_00492 2.1e-257 pepC 3.4.22.40 E Peptidase C1-like family
PPBMDIDC_00493 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
PPBMDIDC_00494 4e-273 P Sodium:sulfate symporter transmembrane region
PPBMDIDC_00495 3.8e-153 ydjP I Alpha/beta hydrolase family
PPBMDIDC_00496 2.2e-196 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PPBMDIDC_00497 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
PPBMDIDC_00498 8.2e-168 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PPBMDIDC_00499 4.9e-290 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PPBMDIDC_00500 9.3e-72 yeaL S Protein of unknown function (DUF441)
PPBMDIDC_00501 1.8e-22
PPBMDIDC_00502 6.1e-146 cbiQ P cobalt transport
PPBMDIDC_00503 0.0 ykoD P ABC transporter, ATP-binding protein
PPBMDIDC_00504 9.6e-95 S UPF0397 protein
PPBMDIDC_00505 2.9e-66 S Domain of unknown function DUF1828
PPBMDIDC_00506 5.5e-09
PPBMDIDC_00507 1.3e-51
PPBMDIDC_00508 5.8e-177 citR K Putative sugar-binding domain
PPBMDIDC_00509 2e-250 yjjP S Putative threonine/serine exporter
PPBMDIDC_00510 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PPBMDIDC_00511 2.5e-175 prmA J Ribosomal protein L11 methyltransferase
PPBMDIDC_00512 2.9e-60
PPBMDIDC_00513 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PPBMDIDC_00514 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PPBMDIDC_00515 6.8e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
PPBMDIDC_00516 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PPBMDIDC_00517 3.4e-222 patA 2.6.1.1 E Aminotransferase
PPBMDIDC_00518 7.3e-217 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PPBMDIDC_00519 1.1e-155 S reductase
PPBMDIDC_00520 2e-149 yxeH S hydrolase
PPBMDIDC_00521 5.2e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PPBMDIDC_00522 1.4e-243 yfnA E Amino Acid
PPBMDIDC_00523 2e-109 dedA 3.1.3.1 S SNARE associated Golgi protein
PPBMDIDC_00524 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PPBMDIDC_00525 5e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PPBMDIDC_00526 2.4e-294 I Acyltransferase
PPBMDIDC_00527 1.7e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PPBMDIDC_00528 1.6e-143 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PPBMDIDC_00529 8.6e-28 yrvD S Lipopolysaccharide assembly protein A domain
PPBMDIDC_00530 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PPBMDIDC_00531 9.5e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PPBMDIDC_00532 2.3e-23 S Protein of unknown function (DUF2929)
PPBMDIDC_00533 0.0 dnaE 2.7.7.7 L DNA polymerase
PPBMDIDC_00534 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PPBMDIDC_00535 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PPBMDIDC_00536 1.9e-169 cvfB S S1 domain
PPBMDIDC_00537 1.2e-166 xerD D recombinase XerD
PPBMDIDC_00538 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PPBMDIDC_00539 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PPBMDIDC_00540 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PPBMDIDC_00541 2e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PPBMDIDC_00542 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PPBMDIDC_00543 2.7e-18 M Lysin motif
PPBMDIDC_00544 8.5e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PPBMDIDC_00545 2.1e-211 rpsA 1.17.7.4 J Ribosomal protein S1
PPBMDIDC_00546 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PPBMDIDC_00547 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PPBMDIDC_00548 1e-229 S Tetratricopeptide repeat protein
PPBMDIDC_00549 5.8e-288 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PPBMDIDC_00550 1.2e-280 V ABC transporter transmembrane region
PPBMDIDC_00551 5.6e-95 speG J Acetyltransferase (GNAT) domain
PPBMDIDC_00552 1.7e-76
PPBMDIDC_00553 1.2e-143 S Protein of unknown function (DUF2785)
PPBMDIDC_00554 4.8e-48 S MazG-like family
PPBMDIDC_00555 3.5e-58
PPBMDIDC_00556 9e-22 S Protein of unknown function (DUF3923)
PPBMDIDC_00557 3.1e-131 3.1.3.48 T Tyrosine phosphatase family
PPBMDIDC_00558 2.3e-116 glsA 3.5.1.2 E Belongs to the glutaminase family
PPBMDIDC_00559 1.2e-263
PPBMDIDC_00560 6.4e-93 rimL J Acetyltransferase (GNAT) domain
PPBMDIDC_00561 1.3e-132 S Alpha/beta hydrolase family
PPBMDIDC_00562 2.2e-67 yxaM EGP Major facilitator Superfamily
PPBMDIDC_00563 1e-75 yxaM EGP Major facilitator Superfamily
PPBMDIDC_00564 1.4e-55 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
PPBMDIDC_00565 6.7e-125 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
PPBMDIDC_00566 3e-79 S AAA domain
PPBMDIDC_00567 6.9e-144 2.4.2.3 F Phosphorylase superfamily
PPBMDIDC_00568 1.8e-144 2.4.2.3 F Phosphorylase superfamily
PPBMDIDC_00569 4e-150 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
PPBMDIDC_00570 1.7e-79 yagE E amino acid
PPBMDIDC_00571 4.1e-89 yagE E Amino acid permease
PPBMDIDC_00572 7.3e-86 3.4.21.96 S SLAP domain
PPBMDIDC_00573 3.3e-158 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PPBMDIDC_00574 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PPBMDIDC_00575 3.4e-107 hlyIII S protein, hemolysin III
PPBMDIDC_00576 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
PPBMDIDC_00577 7.1e-36 yozE S Belongs to the UPF0346 family
PPBMDIDC_00578 2e-68 yjcE P NhaP-type Na H and K H
PPBMDIDC_00579 2.3e-180 yjcE P Sodium proton antiporter
PPBMDIDC_00580 7.3e-155 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PPBMDIDC_00581 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PPBMDIDC_00582 1.3e-151 dprA LU DNA protecting protein DprA
PPBMDIDC_00583 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PPBMDIDC_00584 2.7e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PPBMDIDC_00585 2.2e-141 xerC D Phage integrase, N-terminal SAM-like domain
PPBMDIDC_00586 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PPBMDIDC_00587 2e-234 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PPBMDIDC_00588 1.4e-180 lacX 5.1.3.3 G Aldose 1-epimerase
PPBMDIDC_00589 4.2e-74 C Aldo keto reductase
PPBMDIDC_00590 4e-43 S aldo-keto reductase (NADP) activity
PPBMDIDC_00591 6.8e-66 M LysM domain protein
PPBMDIDC_00592 1.1e-152 xerD L Phage integrase, N-terminal SAM-like domain
PPBMDIDC_00593 7.9e-67 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PPBMDIDC_00594 9.2e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PPBMDIDC_00595 2.9e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PPBMDIDC_00596 6.4e-78 mmuP E amino acid
PPBMDIDC_00597 2e-274 pepV 3.5.1.18 E dipeptidase PepV
PPBMDIDC_00598 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PPBMDIDC_00599 1.7e-284 E Amino acid permease
PPBMDIDC_00600 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PPBMDIDC_00601 3.2e-247 ynbB 4.4.1.1 P aluminum resistance
PPBMDIDC_00602 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PPBMDIDC_00603 1.7e-81 C Flavodoxin
PPBMDIDC_00604 0.0 uvrA3 L excinuclease ABC, A subunit
PPBMDIDC_00605 1.2e-188 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PPBMDIDC_00606 3.6e-114 3.6.1.27 I Acid phosphatase homologues
PPBMDIDC_00607 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PPBMDIDC_00608 2.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
PPBMDIDC_00609 4.6e-203 pbpX1 V Beta-lactamase
PPBMDIDC_00610 2.5e-99 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PPBMDIDC_00611 7.5e-95 S ECF-type riboflavin transporter, S component
PPBMDIDC_00612 2e-230 S Putative peptidoglycan binding domain
PPBMDIDC_00613 2.8e-84 K Acetyltransferase (GNAT) domain
PPBMDIDC_00614 1.4e-250 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PPBMDIDC_00615 1.9e-191 yrvN L AAA C-terminal domain
PPBMDIDC_00616 1.1e-63 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PPBMDIDC_00617 1.8e-267 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PPBMDIDC_00618 3.7e-17
PPBMDIDC_00619 6.6e-240 G Bacterial extracellular solute-binding protein
PPBMDIDC_00620 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
PPBMDIDC_00621 1.3e-237 XK27_01810 S Calcineurin-like phosphoesterase
PPBMDIDC_00623 0.0 S SLAP domain
PPBMDIDC_00624 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
PPBMDIDC_00625 7.9e-258 hsdM 2.1.1.72 V type I restriction-modification system
PPBMDIDC_00626 3.2e-23 3.1.21.3 V Type I restriction modification DNA specificity domain
PPBMDIDC_00627 6.4e-14 3.1.21.3 V COG0732 Restriction endonuclease S subunits
PPBMDIDC_00628 3.2e-57 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PPBMDIDC_00629 3.2e-21 S Psort location Cytoplasmic, score
PPBMDIDC_00630 4.7e-41 S Sel1-like repeats.
PPBMDIDC_00631 1.7e-78 S HIRAN
PPBMDIDC_00632 6.4e-31
PPBMDIDC_00633 2.3e-182
PPBMDIDC_00634 7.8e-100 3.1.4.37 S AAA domain
PPBMDIDC_00635 9.7e-74 S Sel1-like repeats.
PPBMDIDC_00636 9.3e-63 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PPBMDIDC_00637 0.0 tetP J of the elongation factors EF-G and EF-2. Tet(M) and Tet(O) catalyze the release of tetracycline (Tc) from the ribosome
PPBMDIDC_00638 4.4e-158 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PPBMDIDC_00639 5.5e-53
PPBMDIDC_00640 2.4e-282 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PPBMDIDC_00641 4.7e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PPBMDIDC_00642 1.6e-168 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PPBMDIDC_00643 4.6e-199 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PPBMDIDC_00644 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PPBMDIDC_00645 0.0 FbpA K Fibronectin-binding protein
PPBMDIDC_00646 1.1e-66
PPBMDIDC_00647 3.5e-160 degV S EDD domain protein, DegV family
PPBMDIDC_00648 1.9e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PPBMDIDC_00649 1.8e-203 xerS L Belongs to the 'phage' integrase family
PPBMDIDC_00650 4.1e-67
PPBMDIDC_00651 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
PPBMDIDC_00652 1.5e-211 M Glycosyl hydrolases family 25
PPBMDIDC_00653 2e-39 S Transglycosylase associated protein
PPBMDIDC_00654 2.7e-123 yoaK S Protein of unknown function (DUF1275)
PPBMDIDC_00655 4e-57 K Helix-turn-helix domain
PPBMDIDC_00656 1.1e-112 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PPBMDIDC_00657 2.5e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
PPBMDIDC_00658 4.3e-183 K Transcriptional regulator
PPBMDIDC_00659 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PPBMDIDC_00660 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PPBMDIDC_00661 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PPBMDIDC_00662 0.0 snf 2.7.11.1 KL domain protein
PPBMDIDC_00663 4.3e-36
PPBMDIDC_00664 1e-104 pncA Q Isochorismatase family
PPBMDIDC_00665 3.2e-117
PPBMDIDC_00668 3.6e-63
PPBMDIDC_00669 1.4e-34
PPBMDIDC_00670 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
PPBMDIDC_00671 3.4e-79
PPBMDIDC_00672 1e-242 cpdA S Calcineurin-like phosphoesterase
PPBMDIDC_00673 1.1e-217 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PPBMDIDC_00674 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PPBMDIDC_00675 1e-107 ypsA S Belongs to the UPF0398 family
PPBMDIDC_00676 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PPBMDIDC_00677 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PPBMDIDC_00678 6.1e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PPBMDIDC_00679 3.7e-114 dnaD L DnaD domain protein
PPBMDIDC_00680 4.8e-254 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PPBMDIDC_00681 8.3e-90 ypmB S Protein conserved in bacteria
PPBMDIDC_00682 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PPBMDIDC_00683 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PPBMDIDC_00684 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PPBMDIDC_00685 1.3e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PPBMDIDC_00686 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PPBMDIDC_00687 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PPBMDIDC_00688 2.8e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PPBMDIDC_00689 4.4e-117 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
PPBMDIDC_00690 9.8e-266 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PPBMDIDC_00691 1.1e-167
PPBMDIDC_00692 1.8e-144
PPBMDIDC_00693 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PPBMDIDC_00694 3.8e-27
PPBMDIDC_00695 6.7e-145
PPBMDIDC_00696 1.7e-137
PPBMDIDC_00697 4.5e-141
PPBMDIDC_00698 9.6e-124 skfE V ATPases associated with a variety of cellular activities
PPBMDIDC_00699 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
PPBMDIDC_00700 1.2e-243 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PPBMDIDC_00701 2.4e-147 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PPBMDIDC_00702 1.2e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
PPBMDIDC_00703 4.8e-81 mutT 3.6.1.55 F NUDIX domain
PPBMDIDC_00704 8e-128 S Peptidase family M23
PPBMDIDC_00705 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PPBMDIDC_00706 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PPBMDIDC_00707 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PPBMDIDC_00708 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PPBMDIDC_00709 1.1e-136 recO L Involved in DNA repair and RecF pathway recombination
PPBMDIDC_00710 5.9e-236 L transposase, IS605 OrfB family
PPBMDIDC_00711 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PPBMDIDC_00712 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PPBMDIDC_00713 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
PPBMDIDC_00714 1.6e-71 yqeY S YqeY-like protein
PPBMDIDC_00715 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PPBMDIDC_00716 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PPBMDIDC_00717 4.4e-166 cas2 2.7.7.7 L CRISPR-associated protein (Cas_Cas2CT1978)
PPBMDIDC_00718 1.1e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PPBMDIDC_00719 1.1e-121 casE S CRISPR_assoc
PPBMDIDC_00720 6.8e-133 casD S CRISPR-associated protein (Cas_Cas5)
PPBMDIDC_00721 4.9e-199 casC L CT1975-like protein
PPBMDIDC_00722 8.8e-110 casB S CRISPR-associated protein Cse2 (CRISPR_cse2)
PPBMDIDC_00723 0.0 casA L the current gene model (or a revised gene model) may contain a frame shift
PPBMDIDC_00724 0.0 cas3 L CRISPR-associated helicase cas3
PPBMDIDC_00725 4.7e-15 glvR K Helix-turn-helix domain, rpiR family
PPBMDIDC_00726 1.1e-90 mgtC S MgtC family
PPBMDIDC_00727 4.9e-122 malG P ABC transporter permease
PPBMDIDC_00728 2.3e-187 malF P Binding-protein-dependent transport system inner membrane component
PPBMDIDC_00729 8.4e-152 malE G Bacterial extracellular solute-binding protein
PPBMDIDC_00730 8.3e-191 msmX P Belongs to the ABC transporter superfamily
PPBMDIDC_00733 1.3e-83 L Transposase
PPBMDIDC_00735 4e-113 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PPBMDIDC_00736 3.8e-96 dps P Belongs to the Dps family
PPBMDIDC_00737 3e-34 copZ C Heavy-metal-associated domain
PPBMDIDC_00738 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PPBMDIDC_00739 3.1e-101
PPBMDIDC_00740 7.6e-117 S Peptidase family M23
PPBMDIDC_00741 5.5e-106 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PPBMDIDC_00743 1.3e-75
PPBMDIDC_00744 1.8e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PPBMDIDC_00745 3.6e-117
PPBMDIDC_00746 5e-159 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PPBMDIDC_00747 5e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PPBMDIDC_00748 2.1e-282 thrC 4.2.3.1 E Threonine synthase
PPBMDIDC_00749 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PPBMDIDC_00750 1.5e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
PPBMDIDC_00751 0.0 L PLD-like domain
PPBMDIDC_00752 2.6e-40 S SnoaL-like domain
PPBMDIDC_00753 2.9e-70 hipB K sequence-specific DNA binding
PPBMDIDC_00754 2.3e-21 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
PPBMDIDC_00755 7.1e-74
PPBMDIDC_00756 7.8e-283 V ABC-type multidrug transport system, ATPase and permease components
PPBMDIDC_00757 2.1e-280 V ABC-type multidrug transport system, ATPase and permease components
PPBMDIDC_00758 9.9e-310 oppA E ABC transporter, substratebinding protein
PPBMDIDC_00759 1.7e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PPBMDIDC_00760 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PPBMDIDC_00761 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PPBMDIDC_00762 7.2e-200 oppD P Belongs to the ABC transporter superfamily
PPBMDIDC_00763 1.9e-175 oppF P Belongs to the ABC transporter superfamily
PPBMDIDC_00764 1.4e-256 pepC 3.4.22.40 E aminopeptidase
PPBMDIDC_00765 2.9e-67 hsp O Belongs to the small heat shock protein (HSP20) family
PPBMDIDC_00766 2.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PPBMDIDC_00767 1.2e-112
PPBMDIDC_00769 7.8e-111 E Belongs to the SOS response-associated peptidase family
PPBMDIDC_00770 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PPBMDIDC_00771 5.7e-88 comEB 3.5.4.12 F MafB19-like deaminase
PPBMDIDC_00772 2e-103 S TPM domain
PPBMDIDC_00773 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PPBMDIDC_00774 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PPBMDIDC_00775 1.5e-146 tatD L hydrolase, TatD family
PPBMDIDC_00776 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PPBMDIDC_00777 2.7e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PPBMDIDC_00778 1.2e-39 veg S Biofilm formation stimulator VEG
PPBMDIDC_00779 7.7e-149 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PPBMDIDC_00780 8.9e-174 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PPBMDIDC_00781 6.9e-80
PPBMDIDC_00782 0.0 S SLAP domain
PPBMDIDC_00783 1e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PPBMDIDC_00784 1.1e-167 2.7.1.2 GK ROK family
PPBMDIDC_00785 1.9e-43
PPBMDIDC_00786 1.9e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PPBMDIDC_00787 3.3e-68 S Domain of unknown function (DUF1934)
PPBMDIDC_00788 1.7e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PPBMDIDC_00789 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PPBMDIDC_00790 9.6e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PPBMDIDC_00791 2.5e-89 K acetyltransferase
PPBMDIDC_00792 1.3e-284 pipD E Dipeptidase
PPBMDIDC_00793 6.6e-153 msmR K AraC-like ligand binding domain
PPBMDIDC_00794 8.1e-222 pbuX F xanthine permease
PPBMDIDC_00795 4.5e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PPBMDIDC_00797 1.3e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PPBMDIDC_00799 2.3e-47 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PPBMDIDC_00801 8e-95
PPBMDIDC_00802 5.6e-118 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PPBMDIDC_00803 1.4e-95
PPBMDIDC_00804 5.8e-109 K LysR substrate binding domain
PPBMDIDC_00805 1e-20
PPBMDIDC_00806 2.5e-222 S Sterol carrier protein domain
PPBMDIDC_00807 2e-97 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PPBMDIDC_00808 1.1e-108 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
PPBMDIDC_00809 6.1e-65 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PPBMDIDC_00810 8.3e-176 arcA 3.5.3.6 E Arginine
PPBMDIDC_00811 7.7e-29 arcA 3.5.3.6 E Arginine
PPBMDIDC_00812 1.5e-136 lysR5 K LysR substrate binding domain
PPBMDIDC_00813 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PPBMDIDC_00814 1.4e-50 S Metal binding domain of Ada
PPBMDIDC_00815 5.6e-40 ybhL S Belongs to the BI1 family
PPBMDIDC_00817 2.4e-43 S Bacterial protein of unknown function (DUF871)
PPBMDIDC_00818 1.4e-144 S Bacterial protein of unknown function (DUF871)
PPBMDIDC_00819 3.1e-200 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PPBMDIDC_00820 5.3e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PPBMDIDC_00821 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PPBMDIDC_00822 1.5e-102 srtA 3.4.22.70 M sortase family
PPBMDIDC_00823 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PPBMDIDC_00824 9.3e-80 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
PPBMDIDC_00825 9.2e-201 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PPBMDIDC_00826 0.0 dnaK O Heat shock 70 kDa protein
PPBMDIDC_00827 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PPBMDIDC_00828 4.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PPBMDIDC_00829 1.7e-176 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PPBMDIDC_00830 3.4e-158 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PPBMDIDC_00831 3e-60 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PPBMDIDC_00832 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PPBMDIDC_00833 3.2e-47 rplGA J ribosomal protein
PPBMDIDC_00834 8.8e-47 ylxR K Protein of unknown function (DUF448)
PPBMDIDC_00835 2.6e-198 nusA K Participates in both transcription termination and antitermination
PPBMDIDC_00836 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
PPBMDIDC_00837 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PPBMDIDC_00838 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PPBMDIDC_00839 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PPBMDIDC_00840 9.6e-136 cdsA 2.7.7.41 I Belongs to the CDS family
PPBMDIDC_00841 1.6e-137 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PPBMDIDC_00842 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PPBMDIDC_00843 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PPBMDIDC_00844 8.3e-185 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PPBMDIDC_00845 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
PPBMDIDC_00846 4.9e-193 yabB 2.1.1.223 L Methyltransferase small domain
PPBMDIDC_00847 1.9e-112 plsC 2.3.1.51 I Acyltransferase
PPBMDIDC_00848 2.5e-225 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PPBMDIDC_00849 2.8e-100 L An automated process has identified a potential problem with this gene model
PPBMDIDC_00850 2.9e-135 S SLAP domain
PPBMDIDC_00851 0.0 oppA E ABC transporter substrate-binding protein
PPBMDIDC_00852 4.4e-85 dps P Belongs to the Dps family
PPBMDIDC_00853 3.6e-31 npr 1.11.1.1 C NADH oxidase
PPBMDIDC_00854 0.0 pepO 3.4.24.71 O Peptidase family M13
PPBMDIDC_00855 0.0 mdlB V ABC transporter
PPBMDIDC_00856 0.0 mdlA V ABC transporter
PPBMDIDC_00857 3.3e-30 yneF S Uncharacterised protein family (UPF0154)
PPBMDIDC_00858 1.4e-38 ynzC S UPF0291 protein
PPBMDIDC_00859 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PPBMDIDC_00860 2e-146 E GDSL-like Lipase/Acylhydrolase family
PPBMDIDC_00861 4.9e-122 ung2 3.2.2.27 L Uracil-DNA glycosylase
PPBMDIDC_00862 9.9e-216 S SLAP domain
PPBMDIDC_00863 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PPBMDIDC_00864 6.1e-134 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PPBMDIDC_00865 2.2e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PPBMDIDC_00866 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PPBMDIDC_00867 5.8e-229 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PPBMDIDC_00868 4.6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PPBMDIDC_00869 2.2e-260 yfnA E amino acid
PPBMDIDC_00870 0.0 V FtsX-like permease family
PPBMDIDC_00871 2.4e-133 cysA V ABC transporter, ATP-binding protein
PPBMDIDC_00873 3.8e-289 pipD E Dipeptidase
PPBMDIDC_00874 1.1e-162 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PPBMDIDC_00875 0.0 smc D Required for chromosome condensation and partitioning
PPBMDIDC_00876 2.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PPBMDIDC_00877 2.5e-311 oppA E ABC transporter substrate-binding protein
PPBMDIDC_00878 3.4e-269 oppA E ABC transporter substrate-binding protein
PPBMDIDC_00879 6.2e-131 oppC P Binding-protein-dependent transport system inner membrane component
PPBMDIDC_00880 7.5e-172 oppB P ABC transporter permease
PPBMDIDC_00881 1.5e-170 oppF P Belongs to the ABC transporter superfamily
PPBMDIDC_00882 1.1e-192 oppD P Belongs to the ABC transporter superfamily
PPBMDIDC_00883 4.4e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PPBMDIDC_00884 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PPBMDIDC_00885 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PPBMDIDC_00886 4.4e-305 yloV S DAK2 domain fusion protein YloV
PPBMDIDC_00887 4e-57 asp S Asp23 family, cell envelope-related function
PPBMDIDC_00888 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PPBMDIDC_00889 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
PPBMDIDC_00890 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PPBMDIDC_00891 9.7e-166 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PPBMDIDC_00892 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PPBMDIDC_00893 3e-139 stp 3.1.3.16 T phosphatase
PPBMDIDC_00894 1.8e-243 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PPBMDIDC_00895 1.9e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PPBMDIDC_00896 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PPBMDIDC_00897 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PPBMDIDC_00898 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PPBMDIDC_00899 4.2e-77 6.3.3.2 S ASCH
PPBMDIDC_00900 4.4e-300 recN L May be involved in recombinational repair of damaged DNA
PPBMDIDC_00901 7.3e-152 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PPBMDIDC_00902 2.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PPBMDIDC_00903 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PPBMDIDC_00904 7.6e-194 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PPBMDIDC_00905 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PPBMDIDC_00906 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PPBMDIDC_00907 3.4e-71 yqhY S Asp23 family, cell envelope-related function
PPBMDIDC_00908 6.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PPBMDIDC_00909 6.6e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PPBMDIDC_00910 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PPBMDIDC_00911 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PPBMDIDC_00912 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PPBMDIDC_00913 2e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
PPBMDIDC_00915 3.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PPBMDIDC_00916 4.2e-301 S Predicted membrane protein (DUF2207)
PPBMDIDC_00917 1.9e-158 cinI S Serine hydrolase (FSH1)
PPBMDIDC_00918 3.2e-207 M Glycosyl hydrolases family 25
PPBMDIDC_00920 2.9e-178 I Carboxylesterase family
PPBMDIDC_00921 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
PPBMDIDC_00922 2e-278 V ABC-type multidrug transport system, ATPase and permease components
PPBMDIDC_00923 1e-290 V ABC-type multidrug transport system, ATPase and permease components
PPBMDIDC_00924 2.3e-153 S haloacid dehalogenase-like hydrolase
PPBMDIDC_00925 2.6e-52
PPBMDIDC_00926 1.9e-37
PPBMDIDC_00927 1.2e-42 S Alpha beta hydrolase
PPBMDIDC_00928 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PPBMDIDC_00929 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PPBMDIDC_00930 2.2e-47
PPBMDIDC_00931 6.1e-149 glcU U sugar transport
PPBMDIDC_00932 2e-251 lctP C L-lactate permease
PPBMDIDC_00933 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PPBMDIDC_00934 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PPBMDIDC_00935 1e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PPBMDIDC_00936 1.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PPBMDIDC_00937 2.3e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PPBMDIDC_00938 1e-165 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PPBMDIDC_00939 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PPBMDIDC_00940 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PPBMDIDC_00941 6.9e-20 clcA P chloride
PPBMDIDC_00942 5e-38 clcA P chloride
PPBMDIDC_00943 1.6e-285 lsa S ABC transporter
PPBMDIDC_00944 3.7e-45
PPBMDIDC_00945 9.9e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PPBMDIDC_00946 6.5e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PPBMDIDC_00947 1.5e-52 S Iron-sulfur cluster assembly protein
PPBMDIDC_00948 3.2e-121 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PPBMDIDC_00949 1e-49 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PPBMDIDC_00950 4.6e-114 L Resolvase, N-terminal
PPBMDIDC_00951 1.5e-244 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PPBMDIDC_00952 4.4e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PPBMDIDC_00953 1.7e-279 yjeM E Amino Acid
PPBMDIDC_00954 6.6e-304 S SLAP domain
PPBMDIDC_00955 1.2e-137 S Fic/DOC family
PPBMDIDC_00956 3.2e-294
PPBMDIDC_00957 2.2e-78
PPBMDIDC_00958 1.2e-94 S Protein of unknown function (DUF805)
PPBMDIDC_00959 2.3e-69 O OsmC-like protein
PPBMDIDC_00960 1.1e-209 EGP Major facilitator Superfamily
PPBMDIDC_00961 4.7e-222 sptS 2.7.13.3 T Histidine kinase
PPBMDIDC_00962 1.1e-105 K response regulator
PPBMDIDC_00963 2.8e-111 2.7.6.5 T Region found in RelA / SpoT proteins
PPBMDIDC_00964 9.2e-283 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PPBMDIDC_00965 0.0 rafA 3.2.1.22 G alpha-galactosidase
PPBMDIDC_00966 8e-210 msmX P Belongs to the ABC transporter superfamily
PPBMDIDC_00967 5.2e-153 msmG P Binding-protein-dependent transport system inner membrane component
PPBMDIDC_00968 6.2e-157 msmF P Binding-protein-dependent transport system inner membrane component
PPBMDIDC_00969 3.2e-239 msmE G Bacterial extracellular solute-binding protein
PPBMDIDC_00970 7.3e-159 scrR K Periplasmic binding protein domain
PPBMDIDC_00971 7.2e-36
PPBMDIDC_00972 5.4e-197 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PPBMDIDC_00973 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PPBMDIDC_00974 1.1e-220 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PPBMDIDC_00975 0.0 lacZ 3.2.1.23 G -beta-galactosidase
PPBMDIDC_00976 0.0 lacS G Transporter
PPBMDIDC_00977 2.5e-186 lacR K Transcriptional regulator
PPBMDIDC_00978 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PPBMDIDC_00979 2.6e-185 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PPBMDIDC_00980 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PPBMDIDC_00981 2e-121 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PPBMDIDC_00982 1.3e-55 dhaM 2.7.1.121 S PTS system fructose IIA component
PPBMDIDC_00983 8.5e-94 dhaL 2.7.1.121 S Dak2
PPBMDIDC_00984 5.8e-175 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PPBMDIDC_00985 0.0 O Belongs to the peptidase S8 family
PPBMDIDC_00986 1e-259 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PPBMDIDC_00987 1.4e-62
PPBMDIDC_00988 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PPBMDIDC_00989 6.5e-252 E Amino acid permease
PPBMDIDC_00990 2.8e-133 L An automated process has identified a potential problem with this gene model
PPBMDIDC_00991 2.7e-35 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PPBMDIDC_00992 8.4e-66 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PPBMDIDC_00993 6e-72 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PPBMDIDC_00995 7.3e-195 msmX P Belongs to the ABC transporter superfamily
PPBMDIDC_00996 4.9e-55 lrp QT PucR C-terminal helix-turn-helix domain
PPBMDIDC_00997 1.9e-107 yesN K helix_turn_helix, arabinose operon control protein
PPBMDIDC_00998 8.2e-126 yesM 2.7.13.3 T Histidine kinase
PPBMDIDC_00999 3.2e-56 ypcB S integral membrane protein
PPBMDIDC_01000 1.4e-217 G Domain of unknown function (DUF3502)
PPBMDIDC_01001 3.2e-143 lplC U Binding-protein-dependent transport system inner membrane component
PPBMDIDC_01002 2.4e-154 U Binding-protein-dependent transport system inner membrane component
PPBMDIDC_01003 2.3e-243 3.2.1.52 GH20 G Glycosyl hydrolase family 20, catalytic domain
PPBMDIDC_01004 3.1e-264 mdlB V ABC transporter
PPBMDIDC_01005 5.2e-272 mdlA V ABC transporter
PPBMDIDC_01006 0.0 mngB 2.3.1.204, 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PPBMDIDC_01007 9.3e-202 S Metal-independent alpha-mannosidase (GH125)
PPBMDIDC_01008 4.7e-127 rliB K helix_turn_helix gluconate operon transcriptional repressor
PPBMDIDC_01009 5.2e-279 ypdD G Glycosyl hydrolase family 92
PPBMDIDC_01010 1.2e-21 gepA K Protein of unknown function (DUF4065)
PPBMDIDC_01011 4.5e-89 K UTRA domain
PPBMDIDC_01012 2e-223 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPBMDIDC_01013 1.2e-172 ptcC1 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPBMDIDC_01014 3.1e-32 S protein encoded in hypervariable junctions of pilus gene clusters
PPBMDIDC_01015 1.8e-13 hicA S HicA toxin of bacterial toxin-antitoxin,
PPBMDIDC_01016 1.2e-145
PPBMDIDC_01017 2.3e-170
PPBMDIDC_01018 2e-263 glnA 6.3.1.2 E glutamine synthetase
PPBMDIDC_01019 8.4e-224 ynbB 4.4.1.1 P aluminum resistance
PPBMDIDC_01020 9.2e-170 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PPBMDIDC_01021 1.5e-65 yqhL P Rhodanese-like protein
PPBMDIDC_01022 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
PPBMDIDC_01023 3.1e-119 gluP 3.4.21.105 S Rhomboid family
PPBMDIDC_01024 6.4e-105 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PPBMDIDC_01025 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PPBMDIDC_01026 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PPBMDIDC_01027 0.0 S membrane
PPBMDIDC_01028 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PPBMDIDC_01029 1.3e-38 S RelB antitoxin
PPBMDIDC_01030 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PPBMDIDC_01031 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PPBMDIDC_01032 8.8e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
PPBMDIDC_01033 5.1e-149 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PPBMDIDC_01034 1.5e-158 isdE P Periplasmic binding protein
PPBMDIDC_01035 6.3e-123 M Iron Transport-associated domain
PPBMDIDC_01036 3e-09 isdH M Iron Transport-associated domain
PPBMDIDC_01037 1.9e-88
PPBMDIDC_01038 1.4e-112 S SLAP domain
PPBMDIDC_01039 2.9e-50 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PPBMDIDC_01040 9.7e-83 S An automated process has identified a potential problem with this gene model
PPBMDIDC_01041 2.7e-138 S Protein of unknown function (DUF3100)
PPBMDIDC_01042 3.4e-220 3.5.1.47 S Peptidase dimerisation domain
PPBMDIDC_01043 1.9e-233 Q Imidazolonepropionase and related amidohydrolases
PPBMDIDC_01044 0.0 oppA E ABC transporter
PPBMDIDC_01045 1.4e-150 S Sucrose-6F-phosphate phosphohydrolase
PPBMDIDC_01046 0.0 mco Q Multicopper oxidase
PPBMDIDC_01047 1.3e-24
PPBMDIDC_01048 1.9e-158 metQ1 P Belongs to the nlpA lipoprotein family
PPBMDIDC_01049 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PPBMDIDC_01050 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PPBMDIDC_01051 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PPBMDIDC_01052 2.3e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PPBMDIDC_01053 1.8e-156 cjaA ET ABC transporter substrate-binding protein
PPBMDIDC_01054 7.4e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PPBMDIDC_01055 5.3e-116 P ABC transporter permease
PPBMDIDC_01056 7e-108 papP P ABC transporter, permease protein
PPBMDIDC_01058 3.6e-63 yodB K Transcriptional regulator, HxlR family
PPBMDIDC_01059 1.9e-138 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PPBMDIDC_01060 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PPBMDIDC_01061 7.6e-164 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PPBMDIDC_01062 1.5e-72 S Aminoacyl-tRNA editing domain
PPBMDIDC_01063 1.2e-54 S Abi-like protein
PPBMDIDC_01064 1.8e-223 S SLAP domain
PPBMDIDC_01065 1.1e-100 S CAAX protease self-immunity
PPBMDIDC_01066 1.3e-277 arlS 2.7.13.3 T Histidine kinase
PPBMDIDC_01067 1.2e-126 K response regulator
PPBMDIDC_01068 5.5e-98 yceD S Uncharacterized ACR, COG1399
PPBMDIDC_01069 1.2e-216 ylbM S Belongs to the UPF0348 family
PPBMDIDC_01070 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PPBMDIDC_01071 6.6e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PPBMDIDC_01072 1.2e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PPBMDIDC_01073 1.5e-200 yqeH S Ribosome biogenesis GTPase YqeH
PPBMDIDC_01074 4.2e-84 yqeG S HAD phosphatase, family IIIA
PPBMDIDC_01075 9.2e-201 tnpB L Putative transposase DNA-binding domain
PPBMDIDC_01076 5.6e-154 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PPBMDIDC_01077 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PPBMDIDC_01078 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PPBMDIDC_01079 2.2e-73 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PPBMDIDC_01080 2.4e-95 yyaR K Acetyltransferase (GNAT) domain
PPBMDIDC_01081 3e-123 S domain protein
PPBMDIDC_01082 3.1e-167 V ABC transporter
PPBMDIDC_01083 3.8e-75 S Protein of unknown function (DUF3021)
PPBMDIDC_01084 3.5e-76 K LytTr DNA-binding domain
PPBMDIDC_01085 3.5e-91
PPBMDIDC_01086 1.7e-201 L COG2826 Transposase and inactivated derivatives, IS30 family
PPBMDIDC_01087 3.6e-174 S Domain of unknown function (DUF389)
PPBMDIDC_01088 6.6e-85
PPBMDIDC_01089 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PPBMDIDC_01090 6.2e-168 dnaI L Primosomal protein DnaI
PPBMDIDC_01091 2.3e-251 dnaB L Replication initiation and membrane attachment
PPBMDIDC_01092 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PPBMDIDC_01093 1.2e-103 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PPBMDIDC_01094 4.5e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PPBMDIDC_01095 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PPBMDIDC_01097 2.2e-14 S SLAP domain
PPBMDIDC_01099 6.2e-257 L transposase, IS605 OrfB family
PPBMDIDC_01100 0.0 LV site-specific DNA-methyltransferase (adenine-specific) activity
PPBMDIDC_01102 1.5e-47
PPBMDIDC_01106 2.8e-23
PPBMDIDC_01107 9.2e-18
PPBMDIDC_01108 5.9e-201 purD 6.3.4.13 F Belongs to the GARS family
PPBMDIDC_01109 4.4e-134 qmcA O prohibitin homologues
PPBMDIDC_01110 1.8e-50 L RelB antitoxin
PPBMDIDC_01111 2.1e-185 S Bacteriocin helveticin-J
PPBMDIDC_01113 4.4e-41 S Alpha beta hydrolase
PPBMDIDC_01115 5.8e-163 M Peptidase family M1 domain
PPBMDIDC_01116 8.3e-41 M Peptidase family M1 domain
PPBMDIDC_01117 2.4e-184 mntH P H( )-stimulated, divalent metal cation uptake system
PPBMDIDC_01118 5.9e-129 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PPBMDIDC_01119 3.6e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PPBMDIDC_01120 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PPBMDIDC_01121 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PPBMDIDC_01122 5.8e-14 S Protein of unknown function (DUF805)
PPBMDIDC_01123 1.2e-125 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PPBMDIDC_01124 2.2e-221 ecsB U ABC transporter
PPBMDIDC_01125 2e-135 ecsA V ABC transporter, ATP-binding protein
PPBMDIDC_01126 2.8e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
PPBMDIDC_01127 3.9e-25
PPBMDIDC_01128 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PPBMDIDC_01129 5.5e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PPBMDIDC_01130 1.6e-266
PPBMDIDC_01131 2.4e-51 S Domain of unknown function DUF1829
PPBMDIDC_01132 5.9e-24
PPBMDIDC_01133 5.8e-188 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PPBMDIDC_01134 0.0 L AAA domain
PPBMDIDC_01135 2.8e-232 yhaO L Ser Thr phosphatase family protein
PPBMDIDC_01136 7.2e-56 yheA S Belongs to the UPF0342 family
PPBMDIDC_01137 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PPBMDIDC_01138 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PPBMDIDC_01139 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PPBMDIDC_01140 7.9e-111 G Phosphoglycerate mutase family
PPBMDIDC_01141 8.6e-139 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PPBMDIDC_01143 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PPBMDIDC_01144 6.9e-193 I transferase activity, transferring acyl groups other than amino-acyl groups
PPBMDIDC_01145 1.8e-177 S PFAM Archaeal ATPase
PPBMDIDC_01146 1.4e-29 S cog cog1373
PPBMDIDC_01147 1.3e-235 L transposase, IS605 OrfB family
PPBMDIDC_01148 3.7e-72 yniG EGP Major facilitator Superfamily
PPBMDIDC_01150 4.8e-106
PPBMDIDC_01152 2.1e-109
PPBMDIDC_01153 2.7e-143 K LytTr DNA-binding domain
PPBMDIDC_01154 7.6e-126 2.7.13.3 T GHKL domain
PPBMDIDC_01155 3.6e-45
PPBMDIDC_01157 6.6e-77 menA 2.5.1.74 H UbiA prenyltransferase family
PPBMDIDC_01158 8e-157 L COG2826 Transposase and inactivated derivatives, IS30 family
PPBMDIDC_01159 1.3e-220 I transferase activity, transferring acyl groups other than amino-acyl groups
PPBMDIDC_01160 2.6e-92 3.6.1.55 L NUDIX domain
PPBMDIDC_01161 1.8e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PPBMDIDC_01162 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PPBMDIDC_01163 1e-98 M ErfK YbiS YcfS YnhG
PPBMDIDC_01164 8.1e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PPBMDIDC_01165 1.7e-243 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PPBMDIDC_01167 4.3e-47 pspC KT PspC domain
PPBMDIDC_01168 8e-299 ytgP S Polysaccharide biosynthesis protein
PPBMDIDC_01169 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PPBMDIDC_01170 3.8e-122 3.6.1.27 I Acid phosphatase homologues
PPBMDIDC_01171 1.5e-169 K LysR substrate binding domain
PPBMDIDC_01172 2.1e-91 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PPBMDIDC_01173 1.1e-231 ndh 1.6.99.3 C NADH dehydrogenase
PPBMDIDC_01174 3.3e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PPBMDIDC_01175 1.4e-176 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PPBMDIDC_01176 6.3e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PPBMDIDC_01177 2.1e-268 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PPBMDIDC_01178 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PPBMDIDC_01179 9.7e-178 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PPBMDIDC_01180 2.3e-273 cydA 1.10.3.14 C ubiquinol oxidase
PPBMDIDC_01181 4.6e-149 ybbH_2 K rpiR family
PPBMDIDC_01182 5.2e-195 S Bacterial protein of unknown function (DUF871)
PPBMDIDC_01183 7.8e-155 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PPBMDIDC_01184 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
PPBMDIDC_01185 9.1e-262 qacA EGP Major facilitator Superfamily
PPBMDIDC_01186 4.6e-219 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PPBMDIDC_01189 2.6e-166 psaA P Belongs to the bacterial solute-binding protein 9 family
PPBMDIDC_01192 6.8e-101 UW LPXTG-motif cell wall anchor domain protein
PPBMDIDC_01193 4.7e-146 UW LPXTG-motif cell wall anchor domain protein
PPBMDIDC_01194 3e-53 UW LPXTG-motif cell wall anchor domain protein
PPBMDIDC_01196 2.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PPBMDIDC_01197 7.5e-100 J Acetyltransferase (GNAT) domain
PPBMDIDC_01198 1.8e-110 yjbF S SNARE associated Golgi protein
PPBMDIDC_01199 6.5e-153 I alpha/beta hydrolase fold
PPBMDIDC_01200 1.5e-158 hipB K Helix-turn-helix
PPBMDIDC_01201 1.5e-91 F Nucleoside 2-deoxyribosyltransferase
PPBMDIDC_01202 1.5e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PPBMDIDC_01203 1.8e-163
PPBMDIDC_01204 0.0 ydgH S MMPL family
PPBMDIDC_01205 2.3e-99 yobS K Bacterial regulatory proteins, tetR family
PPBMDIDC_01206 2e-148 3.5.2.6 V Beta-lactamase enzyme family
PPBMDIDC_01207 1.8e-154 corA P CorA-like Mg2+ transporter protein
PPBMDIDC_01208 2.5e-239 G Bacterial extracellular solute-binding protein
PPBMDIDC_01209 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PPBMDIDC_01210 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
PPBMDIDC_01211 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
PPBMDIDC_01212 9.3e-203 malK P ATPases associated with a variety of cellular activities
PPBMDIDC_01213 4.1e-283 pipD E Dipeptidase
PPBMDIDC_01214 1.9e-158 endA F DNA RNA non-specific endonuclease
PPBMDIDC_01215 3.2e-183 dnaQ 2.7.7.7 L EXOIII
PPBMDIDC_01216 9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PPBMDIDC_01217 3e-116 yviA S Protein of unknown function (DUF421)
PPBMDIDC_01218 1.1e-72 S Protein of unknown function (DUF3290)
PPBMDIDC_01219 9e-141 pnuC H nicotinamide mononucleotide transporter
PPBMDIDC_01220 1.4e-13
PPBMDIDC_01221 9.3e-130 S PAS domain
PPBMDIDC_01222 4.9e-277 V ABC transporter transmembrane region
PPBMDIDC_01223 7.2e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PPBMDIDC_01224 3.1e-130 T Transcriptional regulatory protein, C terminal
PPBMDIDC_01225 4.5e-247 T GHKL domain
PPBMDIDC_01226 3e-85 S Peptidase propeptide and YPEB domain
PPBMDIDC_01227 8e-103 S Peptidase propeptide and YPEB domain
PPBMDIDC_01228 1.8e-95 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PPBMDIDC_01229 8.2e-76 yybA 2.3.1.57 K Transcriptional regulator
PPBMDIDC_01230 5.8e-241 V ABC transporter transmembrane region
PPBMDIDC_01231 0.0 oppA3 E ABC transporter, substratebinding protein
PPBMDIDC_01232 2.2e-61 ypaA S Protein of unknown function (DUF1304)
PPBMDIDC_01233 1.5e-101 S Peptidase propeptide and YPEB domain
PPBMDIDC_01234 4.4e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PPBMDIDC_01235 4.6e-171 coaA 2.7.1.33 F Pantothenic acid kinase
PPBMDIDC_01236 4.9e-99 E GDSL-like Lipase/Acylhydrolase
PPBMDIDC_01237 3.7e-73 yjcF S Acetyltransferase (GNAT) domain
PPBMDIDC_01238 1.6e-143 aatB ET ABC transporter substrate-binding protein
PPBMDIDC_01239 6.5e-108 glnQ 3.6.3.21 E ABC transporter
PPBMDIDC_01240 3.6e-109 glnP P ABC transporter permease
PPBMDIDC_01241 0.0 helD 3.6.4.12 L DNA helicase
PPBMDIDC_01242 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PPBMDIDC_01243 1.4e-126 pgm3 G Phosphoglycerate mutase family
PPBMDIDC_01244 1.4e-242 S response to antibiotic
PPBMDIDC_01245 1.6e-123
PPBMDIDC_01246 0.0 3.6.3.8 P P-type ATPase
PPBMDIDC_01247 9.7e-65 2.7.1.191 G PTS system fructose IIA component
PPBMDIDC_01248 6.2e-42
PPBMDIDC_01249 7.7e-09
PPBMDIDC_01250 1.5e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
PPBMDIDC_01251 1.8e-136 glvR K Helix-turn-helix domain, rpiR family
PPBMDIDC_01252 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PPBMDIDC_01253 3.1e-150
PPBMDIDC_01254 8.6e-24
PPBMDIDC_01255 3.1e-90 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PPBMDIDC_01256 9.9e-157 S Archaea bacterial proteins of unknown function
PPBMDIDC_01257 4.7e-105 3.2.2.20 K acetyltransferase
PPBMDIDC_01259 4e-44 S polysaccharide biosynthetic process
PPBMDIDC_01260 9.7e-106 S Bacterial protein of unknown function (DUF871)
PPBMDIDC_01261 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
PPBMDIDC_01262 5e-72 L Transposase DDE domain
PPBMDIDC_01263 2.1e-62 L Transposase
PPBMDIDC_01264 6.8e-35 L Transposase
PPBMDIDC_01265 5.9e-94 J Domain of unknown function (DUF4041)
PPBMDIDC_01266 1.2e-145 3.2.1.18 GH33 M Rib/alpha-like repeat
PPBMDIDC_01269 1e-24
PPBMDIDC_01270 1.8e-46 fic D Fic/DOC family
PPBMDIDC_01271 8.1e-35 L Transposase
PPBMDIDC_01272 1.2e-155 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
PPBMDIDC_01273 1.8e-51 S Bacteriophage abortive infection AbiH
PPBMDIDC_01274 1.1e-49 S KAP family P-loop domain
PPBMDIDC_01277 9.6e-150 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PPBMDIDC_01278 5.5e-10
PPBMDIDC_01279 6.5e-37 L IS66 C-terminal element
PPBMDIDC_01280 6.7e-201 FH Permease for cytosine/purines, uracil, thiamine, allantoin
PPBMDIDC_01282 4.9e-217 licC 2.7.1.89 M Choline/ethanolamine kinase
PPBMDIDC_01283 2.5e-20
PPBMDIDC_01284 6.5e-33 L PFAM IS66 Orf2 family protein
PPBMDIDC_01285 2e-14 S Transposase C of IS166 homeodomain
PPBMDIDC_01286 1.7e-246 L Transposase IS66 family
PPBMDIDC_01287 4.7e-120 L Transposase
PPBMDIDC_01288 4e-26 L Transposase
PPBMDIDC_01289 3.4e-11 2.3.1.30 E Hexapeptide repeat of succinyl-transferase
PPBMDIDC_01290 5.9e-160 L An automated process has identified a potential problem with this gene model
PPBMDIDC_01291 4.6e-188 L COG2826 Transposase and inactivated derivatives, IS30 family
PPBMDIDC_01292 4.7e-73 S Acyltransferase family
PPBMDIDC_01293 5.3e-56 S Acyltransferase family
PPBMDIDC_01294 3.9e-217 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
PPBMDIDC_01295 4.7e-210 glf 5.4.99.9 M UDP-galactopyranose mutase
PPBMDIDC_01296 9.4e-43 M LicD family
PPBMDIDC_01297 1.2e-36
PPBMDIDC_01298 7.9e-79 M Domain of unknown function (DUF4422)
PPBMDIDC_01299 1.1e-30 pssE S Glycosyltransferase family 28 C-terminal domain
PPBMDIDC_01300 7.7e-34 pssD M Oligosaccharide biosynthesis protein Alg14 like
PPBMDIDC_01301 4.2e-94 GT4 M Glycosyl transferases group 1
PPBMDIDC_01302 4.9e-122 M Glycosyltransferase
PPBMDIDC_01303 7.8e-112 rfbP M Bacterial sugar transferase
PPBMDIDC_01304 8.2e-145 ywqE 3.1.3.48 GM PHP domain protein
PPBMDIDC_01305 9.6e-125 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PPBMDIDC_01306 5.1e-151 epsB M biosynthesis protein
PPBMDIDC_01307 3.8e-177 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PPBMDIDC_01308 1.3e-47 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
PPBMDIDC_01309 1.3e-41 relB L RelB antitoxin
PPBMDIDC_01310 3.1e-240 L transposase, IS605 OrfB family
PPBMDIDC_01311 4.7e-222 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PPBMDIDC_01312 2.2e-177 S Cysteine-rich secretory protein family
PPBMDIDC_01313 8.1e-120 M NlpC/P60 family
PPBMDIDC_01314 1.4e-136 M NlpC P60 family protein
PPBMDIDC_01315 1.5e-84 M NlpC/P60 family
PPBMDIDC_01316 4.6e-94 gmk2 2.7.4.8 F Guanylate kinase homologues.
PPBMDIDC_01317 9.3e-44
PPBMDIDC_01318 2.9e-279 S O-antigen ligase like membrane protein
PPBMDIDC_01319 2.8e-111
PPBMDIDC_01320 2.2e-78 nrdI F NrdI Flavodoxin like
PPBMDIDC_01321 3.6e-179 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PPBMDIDC_01322 2.8e-75
PPBMDIDC_01323 7.7e-111 yvpB S Peptidase_C39 like family
PPBMDIDC_01324 8.7e-84 S Threonine/Serine exporter, ThrE
PPBMDIDC_01325 4.8e-137 thrE S Putative threonine/serine exporter
PPBMDIDC_01326 1.7e-290 S ABC transporter
PPBMDIDC_01327 2.5e-62
PPBMDIDC_01328 2.2e-102 rimL J Acetyltransferase (GNAT) domain
PPBMDIDC_01329 2.5e-124 S Protein of unknown function (DUF554)
PPBMDIDC_01330 2.3e-210 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PPBMDIDC_01331 0.0 pepF E oligoendopeptidase F
PPBMDIDC_01332 1e-60 L COG2963 Transposase and inactivated derivatives
PPBMDIDC_01333 2e-30 S Omega Transcriptional Repressor
PPBMDIDC_01334 6.9e-133 ksgA 2.1.1.182, 2.1.1.184 J Ribosomal RNA adenine dimethylase
PPBMDIDC_01335 1.8e-15
PPBMDIDC_01336 4.9e-215 L COG2963 Transposase and inactivated derivatives
PPBMDIDC_01337 2.7e-19 mloB K Putative ATP-dependent DNA helicase recG C-terminal
PPBMDIDC_01338 1.6e-248 lctP C L-lactate permease
PPBMDIDC_01339 7.9e-127 znuB U ABC 3 transport family
PPBMDIDC_01340 3e-108 fhuC P ABC transporter
PPBMDIDC_01341 1e-138 psaA P Belongs to the bacterial solute-binding protein 9 family
PPBMDIDC_01342 4.4e-43 K helix_turn_helix, Arsenical Resistance Operon Repressor
PPBMDIDC_01343 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PPBMDIDC_01344 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PPBMDIDC_01345 1.8e-136 fruR K DeoR C terminal sensor domain
PPBMDIDC_01346 1e-218 natB CP ABC-2 family transporter protein
PPBMDIDC_01347 4.6e-163 natA S ABC transporter, ATP-binding protein
PPBMDIDC_01348 1.7e-67
PPBMDIDC_01349 2.1e-25
PPBMDIDC_01350 2.4e-30 yozG K Transcriptional regulator
PPBMDIDC_01351 1.8e-77
PPBMDIDC_01352 9.2e-10
PPBMDIDC_01353 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PPBMDIDC_01354 2.5e-272 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PPBMDIDC_01355 1e-24
PPBMDIDC_01356 1.2e-25
PPBMDIDC_01357 2.2e-33
PPBMDIDC_01358 5.3e-53 S Enterocin A Immunity
PPBMDIDC_01359 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PPBMDIDC_01360 1.4e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PPBMDIDC_01361 4.6e-208 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PPBMDIDC_01362 9.6e-121 K response regulator
PPBMDIDC_01363 0.0 V ABC transporter
PPBMDIDC_01364 8.1e-302 V ABC transporter, ATP-binding protein
PPBMDIDC_01365 1.8e-107 XK27_01040 S Protein of unknown function (DUF1129)
PPBMDIDC_01366 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PPBMDIDC_01367 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
PPBMDIDC_01368 3.8e-154 spo0J K Belongs to the ParB family
PPBMDIDC_01369 3.4e-138 soj D Sporulation initiation inhibitor
PPBMDIDC_01370 1.3e-148 noc K Belongs to the ParB family
PPBMDIDC_01371 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PPBMDIDC_01372 3.9e-53 cvpA S Colicin V production protein
PPBMDIDC_01373 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PPBMDIDC_01374 3e-150 3.1.3.48 T Tyrosine phosphatase family
PPBMDIDC_01375 7e-98 azr 1.5.1.36 S NADPH-dependent FMN reductase
PPBMDIDC_01376 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PPBMDIDC_01377 1.8e-110 K WHG domain
PPBMDIDC_01378 8e-38
PPBMDIDC_01379 1.8e-275 pipD E Dipeptidase
PPBMDIDC_01380 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PPBMDIDC_01381 1.2e-175 hrtB V ABC transporter permease
PPBMDIDC_01382 3.1e-95 ygfC K Bacterial regulatory proteins, tetR family
PPBMDIDC_01383 2.3e-110 G phosphoglycerate mutase
PPBMDIDC_01384 3.6e-137 aroD S Alpha/beta hydrolase family
PPBMDIDC_01385 9e-128 S Belongs to the UPF0246 family
PPBMDIDC_01386 3.6e-101
PPBMDIDC_01387 4.1e-154 EGP Major Facilitator Superfamily
PPBMDIDC_01388 9.2e-72 S 2-Nitropropane dioxygenase
PPBMDIDC_01389 4.8e-156 2.7.7.12 C Domain of unknown function (DUF4931)
PPBMDIDC_01390 2.6e-190 S Putative peptidoglycan binding domain
PPBMDIDC_01391 4e-16
PPBMDIDC_01392 7.9e-92 liaI S membrane
PPBMDIDC_01393 1.7e-70 XK27_02470 K LytTr DNA-binding domain
PPBMDIDC_01395 2.6e-133 L PFAM transposase, IS4 family protein
PPBMDIDC_01396 0.0 fnq20 1.13.12.16 S FAD-NAD(P)-binding
PPBMDIDC_01397 1.3e-107 ddpX 3.4.13.22 E Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
PPBMDIDC_01398 8.7e-131 cylB V ABC-2 type transporter
PPBMDIDC_01399 9.2e-153 cylA V AAA domain, putative AbiEii toxin, Type IV TA system
PPBMDIDC_01400 1.6e-100 tnpR L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
PPBMDIDC_01401 4.7e-114 K Transcriptional regulator
PPBMDIDC_01402 2.9e-293 M Exporter of polyketide antibiotics
PPBMDIDC_01403 4.4e-169 yjjC V ABC transporter
PPBMDIDC_01406 1.7e-46 2.7.13.3 T GHKL domain
PPBMDIDC_01407 1.4e-249 dtpT U amino acid peptide transporter
PPBMDIDC_01408 0.0 pepN 3.4.11.2 E aminopeptidase
PPBMDIDC_01409 2.2e-47 lysM M LysM domain
PPBMDIDC_01410 2e-175
PPBMDIDC_01411 1.1e-212 mdtG EGP Major facilitator Superfamily
PPBMDIDC_01412 3.2e-89 ymdB S Macro domain protein
PPBMDIDC_01413 1.1e-08
PPBMDIDC_01415 3.3e-147 malG P ABC transporter permease
PPBMDIDC_01416 3.3e-250 malF P Binding-protein-dependent transport system inner membrane component
PPBMDIDC_01417 3.8e-213 malE G Bacterial extracellular solute-binding protein
PPBMDIDC_01418 4.7e-210 msmX P Belongs to the ABC transporter superfamily
PPBMDIDC_01419 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PPBMDIDC_01420 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PPBMDIDC_01421 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PPBMDIDC_01422 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PPBMDIDC_01423 9.1e-77 S PAS domain
PPBMDIDC_01424 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PPBMDIDC_01425 1.1e-178 yvdE K helix_turn _helix lactose operon repressor
PPBMDIDC_01426 6.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
PPBMDIDC_01427 1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PPBMDIDC_01428 2.8e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PPBMDIDC_01430 3.9e-41 K Helix-turn-helix XRE-family like proteins
PPBMDIDC_01431 5.9e-47 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
PPBMDIDC_01432 6.5e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PPBMDIDC_01433 2.1e-67 L RelB antitoxin
PPBMDIDC_01435 3.8e-133 cobQ S glutamine amidotransferase
PPBMDIDC_01436 4.8e-82 M NlpC/P60 family
PPBMDIDC_01438 1.3e-159
PPBMDIDC_01441 3.2e-38
PPBMDIDC_01442 1.3e-165 EG EamA-like transporter family
PPBMDIDC_01443 7e-167 EG EamA-like transporter family
PPBMDIDC_01444 5.3e-116 yicL EG EamA-like transporter family
PPBMDIDC_01445 5.7e-107
PPBMDIDC_01446 1.1e-110
PPBMDIDC_01447 4e-187 XK27_05540 S DUF218 domain
PPBMDIDC_01448 3.5e-263 yheS_2 S ATPases associated with a variety of cellular activities
PPBMDIDC_01449 1.4e-89
PPBMDIDC_01450 3.9e-57
PPBMDIDC_01451 1.2e-28 S Protein conserved in bacteria
PPBMDIDC_01452 3.3e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PPBMDIDC_01453 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PPBMDIDC_01454 7e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PPBMDIDC_01457 2e-205 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PPBMDIDC_01458 1.4e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
PPBMDIDC_01459 2.2e-228 steT_1 E amino acid
PPBMDIDC_01460 1.2e-140 puuD S peptidase C26
PPBMDIDC_01461 4.3e-245 yifK E Amino acid permease
PPBMDIDC_01462 3.9e-233 cycA E Amino acid permease
PPBMDIDC_01463 1.6e-114 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PPBMDIDC_01464 2.1e-118 V ABC transporter transmembrane region
PPBMDIDC_01465 0.0 clpE O AAA domain (Cdc48 subfamily)
PPBMDIDC_01466 7.5e-166 S Alpha/beta hydrolase of unknown function (DUF915)
PPBMDIDC_01467 4.8e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPBMDIDC_01468 2.3e-125 XK27_06785 V ABC transporter, ATP-binding protein
PPBMDIDC_01469 0.0 XK27_06780 V ABC transporter permease
PPBMDIDC_01470 1.9e-36
PPBMDIDC_01471 7.2e-292 ytgP S Polysaccharide biosynthesis protein
PPBMDIDC_01472 2.9e-136 lysA2 M Glycosyl hydrolases family 25
PPBMDIDC_01473 2.6e-132 S Protein of unknown function (DUF975)
PPBMDIDC_01474 8.1e-171 pbpX2 V Beta-lactamase
PPBMDIDC_01475 9.8e-244 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PPBMDIDC_01476 5.7e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PPBMDIDC_01477 3.1e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
PPBMDIDC_01478 1.3e-287 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PPBMDIDC_01479 5.2e-19 S D-Ala-teichoic acid biosynthesis protein
PPBMDIDC_01480 4.7e-48
PPBMDIDC_01481 1.7e-215 ywhK S Membrane
PPBMDIDC_01482 3.9e-81 ykuL S (CBS) domain
PPBMDIDC_01483 0.0 cadA P P-type ATPase
PPBMDIDC_01484 5.7e-62
PPBMDIDC_01485 2.8e-205 napA P Sodium/hydrogen exchanger family
PPBMDIDC_01486 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PPBMDIDC_01487 3.2e-43 S YoeB-like toxin of bacterial type II toxin-antitoxin system
PPBMDIDC_01488 1.1e-276 V ABC transporter transmembrane region
PPBMDIDC_01489 7.5e-48 S Putative adhesin
PPBMDIDC_01490 2.7e-157 mutR K Helix-turn-helix XRE-family like proteins
PPBMDIDC_01491 1.4e-51
PPBMDIDC_01492 2.4e-121 S CAAX protease self-immunity
PPBMDIDC_01493 9.5e-195 S DUF218 domain
PPBMDIDC_01494 0.0 macB_3 V ABC transporter, ATP-binding protein
PPBMDIDC_01495 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PPBMDIDC_01496 2.8e-100 S ECF transporter, substrate-specific component
PPBMDIDC_01497 4.7e-202 tcsA S ABC transporter substrate-binding protein PnrA-like
PPBMDIDC_01498 1.5e-200 tcsA S ABC transporter substrate-binding protein PnrA-like
PPBMDIDC_01499 5.2e-284 xylG 3.6.3.17 S ABC transporter
PPBMDIDC_01500 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
PPBMDIDC_01501 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
PPBMDIDC_01502 4.3e-160 yeaE S Aldo/keto reductase family
PPBMDIDC_01503 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PPBMDIDC_01504 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PPBMDIDC_01505 1.1e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PPBMDIDC_01506 3.6e-71
PPBMDIDC_01507 3.7e-140 cof S haloacid dehalogenase-like hydrolase
PPBMDIDC_01508 2.2e-230 pbuG S permease
PPBMDIDC_01509 6e-93 K Helix-turn-helix XRE-family like proteins
PPBMDIDC_01510 2.4e-78 V ATPases associated with a variety of cellular activities
PPBMDIDC_01511 1.8e-123 S ABC-2 family transporter protein
PPBMDIDC_01512 7.3e-127 K helix_turn_helix, mercury resistance
PPBMDIDC_01513 5.7e-231 pbuG S permease
PPBMDIDC_01514 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
PPBMDIDC_01515 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
PPBMDIDC_01517 3.6e-42 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PPBMDIDC_01518 3.1e-34 K Transcriptional regulator
PPBMDIDC_01519 4e-60 K Transcriptional regulator
PPBMDIDC_01520 5.3e-226 S cog cog1373
PPBMDIDC_01521 7.4e-146 S haloacid dehalogenase-like hydrolase
PPBMDIDC_01522 2.2e-227 pbuG S permease
PPBMDIDC_01523 2.3e-27
PPBMDIDC_01524 3.3e-56 K Helix-turn-helix domain
PPBMDIDC_01525 2.3e-72 S Putative adhesin
PPBMDIDC_01526 5.1e-75 atkY K Penicillinase repressor
PPBMDIDC_01527 3.1e-65 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PPBMDIDC_01528 7e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PPBMDIDC_01529 0.0 copA 3.6.3.54 P P-type ATPase
PPBMDIDC_01530 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PPBMDIDC_01531 1.2e-105
PPBMDIDC_01532 7e-248 EGP Sugar (and other) transporter
PPBMDIDC_01533 1.2e-18
PPBMDIDC_01534 7.3e-211
PPBMDIDC_01535 1.1e-82 L An automated process has identified a potential problem with this gene model
PPBMDIDC_01536 1.7e-42 rhaS6 K helix_turn_helix, arabinose operon control protein
PPBMDIDC_01537 5.3e-130 GK ROK family
PPBMDIDC_01538 3.5e-199 V MatE
PPBMDIDC_01539 1.5e-242 yisQ V MatE
PPBMDIDC_01540 1.1e-137 L An automated process has identified a potential problem with this gene model
PPBMDIDC_01541 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
PPBMDIDC_01542 4e-32 E Zn peptidase
PPBMDIDC_01543 3.2e-289 clcA P chloride
PPBMDIDC_01544 3.4e-274 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PPBMDIDC_01545 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PPBMDIDC_01546 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PPBMDIDC_01547 6.2e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PPBMDIDC_01548 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PPBMDIDC_01549 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PPBMDIDC_01550 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PPBMDIDC_01551 5.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PPBMDIDC_01552 1.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PPBMDIDC_01553 2.6e-35 yaaA S S4 domain protein YaaA
PPBMDIDC_01554 6.2e-210 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PPBMDIDC_01555 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PPBMDIDC_01556 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PPBMDIDC_01557 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PPBMDIDC_01558 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PPBMDIDC_01559 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PPBMDIDC_01560 3.7e-108 S Bacteriocin helveticin-J
PPBMDIDC_01561 2e-200 S SLAP domain
PPBMDIDC_01562 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PPBMDIDC_01563 5.7e-69 rplI J Binds to the 23S rRNA
PPBMDIDC_01564 4.3e-253 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PPBMDIDC_01565 3.5e-166 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PPBMDIDC_01566 5e-165 degV S DegV family
PPBMDIDC_01567 2.5e-166 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PPBMDIDC_01569 3.5e-15 S Transglycosylase associated protein
PPBMDIDC_01570 8e-227 I Protein of unknown function (DUF2974)
PPBMDIDC_01571 9.8e-121 yhiD S MgtC family
PPBMDIDC_01573 9.1e-66 L An automated process has identified a potential problem with this gene model
PPBMDIDC_01577 1.2e-24 WQ51_00220 K Helix-turn-helix XRE-family like proteins
PPBMDIDC_01579 5.1e-39 ybaT E Amino acid permease
PPBMDIDC_01580 5.7e-42 ybaT E Amino acid permease
PPBMDIDC_01583 7.4e-146 S Putative ABC-transporter type IV
PPBMDIDC_01585 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PPBMDIDC_01586 7e-63 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PPBMDIDC_01587 1.8e-37 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PPBMDIDC_01588 0.0 oppA E ABC transporter substrate-binding protein
PPBMDIDC_01589 1.9e-176 K AI-2E family transporter
PPBMDIDC_01590 3.1e-104 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PPBMDIDC_01591 6.9e-18
PPBMDIDC_01592 2.6e-247 G Major Facilitator
PPBMDIDC_01593 8.8e-81 E Zn peptidase
PPBMDIDC_01594 1.2e-41 ps115 K Helix-turn-helix XRE-family like proteins
PPBMDIDC_01595 2.9e-43
PPBMDIDC_01596 2e-52 S Bacteriocin helveticin-J
PPBMDIDC_01597 1.3e-37
PPBMDIDC_01598 4.4e-45
PPBMDIDC_01599 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
PPBMDIDC_01600 4.5e-118 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PPBMDIDC_01601 4.4e-175 ABC-SBP S ABC transporter
PPBMDIDC_01602 1.1e-135 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PPBMDIDC_01603 7.3e-158 P CorA-like Mg2+ transporter protein
PPBMDIDC_01604 2.5e-158 yvgN C Aldo keto reductase
PPBMDIDC_01605 0.0 tetP J elongation factor G
PPBMDIDC_01606 2e-149 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
PPBMDIDC_01607 6.2e-193 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PPBMDIDC_01610 2.2e-159 xth 3.1.11.2 L exodeoxyribonuclease III
PPBMDIDC_01611 7.3e-272 E amino acid
PPBMDIDC_01612 0.0 L Helicase C-terminal domain protein
PPBMDIDC_01613 2.4e-204 pbpX1 V Beta-lactamase
PPBMDIDC_01614 3.9e-226 N Uncharacterized conserved protein (DUF2075)
PPBMDIDC_01615 1.2e-70 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PPBMDIDC_01616 9.2e-78 L transposase, IS605 OrfB family
PPBMDIDC_01617 1.9e-61 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PPBMDIDC_01618 1.8e-122 K Transcriptional regulator, LysR family
PPBMDIDC_01619 1.3e-232 I Acyl-CoA dehydrogenase, N-terminal domain
PPBMDIDC_01620 5.6e-228 MA20_04610 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PPBMDIDC_01621 1.9e-185 I Acyl-CoA dehydrogenase, C-terminal domain
PPBMDIDC_01622 8e-57 fixA C Electron transfer flavoprotein domain
PPBMDIDC_01623 3.2e-87 ygcQ C Electron transfer flavoprotein FAD-binding domain
PPBMDIDC_01624 1.3e-170 6.2.1.3 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PPBMDIDC_01625 1.6e-31 ykhA 3.1.2.20 I Thioesterase superfamily
PPBMDIDC_01629 9e-91 UW LPXTG-motif cell wall anchor domain protein
PPBMDIDC_01630 4e-187 L Helix-turn-helix domain
PPBMDIDC_01631 6.1e-96 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PPBMDIDC_01632 3.4e-94
PPBMDIDC_01633 2e-115 5.3.3.2 C FMN-dependent dehydrogenase
PPBMDIDC_01634 3.1e-51
PPBMDIDC_01635 2.1e-42
PPBMDIDC_01636 7.5e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PPBMDIDC_01637 2.7e-299 ybeC E amino acid
PPBMDIDC_01638 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
PPBMDIDC_01639 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PPBMDIDC_01640 9.6e-39 rpmE2 J Ribosomal protein L31
PPBMDIDC_01641 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PPBMDIDC_01642 2.6e-248 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PPBMDIDC_01643 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PPBMDIDC_01644 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PPBMDIDC_01645 9.9e-129 S (CBS) domain
PPBMDIDC_01646 5.6e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PPBMDIDC_01647 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PPBMDIDC_01648 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PPBMDIDC_01649 1.6e-33 yabO J S4 domain protein
PPBMDIDC_01650 6.8e-60 divIC D Septum formation initiator
PPBMDIDC_01651 6.3e-63 yabR J S1 RNA binding domain
PPBMDIDC_01652 9.9e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PPBMDIDC_01653 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PPBMDIDC_01654 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PPBMDIDC_01655 2.3e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PPBMDIDC_01656 5.8e-299 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PPBMDIDC_01659 1.6e-08
PPBMDIDC_01660 1.6e-08
PPBMDIDC_01662 3.8e-81 yebR 1.8.4.14 T GAF domain-containing protein
PPBMDIDC_01663 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PPBMDIDC_01664 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PPBMDIDC_01665 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PPBMDIDC_01666 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PPBMDIDC_01667 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PPBMDIDC_01668 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PPBMDIDC_01669 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PPBMDIDC_01670 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PPBMDIDC_01671 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PPBMDIDC_01672 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
PPBMDIDC_01673 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PPBMDIDC_01674 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PPBMDIDC_01675 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PPBMDIDC_01676 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PPBMDIDC_01677 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PPBMDIDC_01678 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PPBMDIDC_01679 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PPBMDIDC_01680 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PPBMDIDC_01681 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PPBMDIDC_01682 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PPBMDIDC_01683 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PPBMDIDC_01684 6.8e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PPBMDIDC_01685 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PPBMDIDC_01686 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PPBMDIDC_01687 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PPBMDIDC_01688 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PPBMDIDC_01689 2.3e-24 rpmD J Ribosomal protein L30
PPBMDIDC_01690 2.6e-71 rplO J Binds to the 23S rRNA
PPBMDIDC_01691 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PPBMDIDC_01692 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PPBMDIDC_01693 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PPBMDIDC_01694 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PPBMDIDC_01695 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PPBMDIDC_01696 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PPBMDIDC_01697 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PPBMDIDC_01698 1.4e-60 rplQ J Ribosomal protein L17
PPBMDIDC_01699 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PPBMDIDC_01700 4.6e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PPBMDIDC_01701 2.6e-138 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PPBMDIDC_01702 3e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PPBMDIDC_01703 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PPBMDIDC_01704 1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
PPBMDIDC_01705 6.7e-156 M Belongs to the glycosyl hydrolase 28 family
PPBMDIDC_01706 1.9e-80 K Acetyltransferase (GNAT) domain
PPBMDIDC_01707 4.1e-96 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PPBMDIDC_01708 5.6e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PPBMDIDC_01709 3.8e-134 S membrane transporter protein
PPBMDIDC_01710 5.8e-126 gpmB G Belongs to the phosphoglycerate mutase family
PPBMDIDC_01711 5.1e-162 czcD P cation diffusion facilitator family transporter
PPBMDIDC_01712 1.4e-23
PPBMDIDC_01713 2.9e-125 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PPBMDIDC_01714 2.4e-183 S AAA domain
PPBMDIDC_01715 3e-267 pepC 3.4.22.40 E Peptidase C1-like family
PPBMDIDC_01716 6.4e-53
PPBMDIDC_01717 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PPBMDIDC_01718 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PPBMDIDC_01719 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PPBMDIDC_01720 1.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PPBMDIDC_01721 2.3e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PPBMDIDC_01722 6.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PPBMDIDC_01723 5.5e-95 sigH K Belongs to the sigma-70 factor family
PPBMDIDC_01724 1.7e-34
PPBMDIDC_01725 1.5e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PPBMDIDC_01726 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PPBMDIDC_01727 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PPBMDIDC_01728 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
PPBMDIDC_01729 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PPBMDIDC_01730 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PPBMDIDC_01731 7.3e-158 pstS P Phosphate
PPBMDIDC_01732 3.9e-163 pstC P probably responsible for the translocation of the substrate across the membrane
PPBMDIDC_01733 1.2e-155 pstA P Phosphate transport system permease protein PstA
PPBMDIDC_01734 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PPBMDIDC_01735 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PPBMDIDC_01736 7.5e-118 phoU P Plays a role in the regulation of phosphate uptake
PPBMDIDC_01737 8.4e-61 L An automated process has identified a potential problem with this gene model
PPBMDIDC_01739 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PPBMDIDC_01740 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PPBMDIDC_01741 6e-141 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PPBMDIDC_01742 6.4e-116 rsmC 2.1.1.172 J Methyltransferase
PPBMDIDC_01743 9e-26
PPBMDIDC_01744 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PPBMDIDC_01745 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PPBMDIDC_01746 9.4e-43 2.4.1.58 GT8 M family 8
PPBMDIDC_01747 1e-34 M lipopolysaccharide 3-alpha-galactosyltransferase activity
PPBMDIDC_01748 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PPBMDIDC_01749 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PPBMDIDC_01750 1.1e-34 S Protein of unknown function (DUF2508)
PPBMDIDC_01751 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PPBMDIDC_01752 8.9e-53 yaaQ S Cyclic-di-AMP receptor
PPBMDIDC_01753 3e-156 holB 2.7.7.7 L DNA polymerase III
PPBMDIDC_01754 1.8e-59 yabA L Involved in initiation control of chromosome replication
PPBMDIDC_01755 1.3e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PPBMDIDC_01756 8.4e-139 fat 3.1.2.21 I Acyl-ACP thioesterase
PPBMDIDC_01757 1.5e-86 S ECF transporter, substrate-specific component
PPBMDIDC_01758 8.1e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PPBMDIDC_01759 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PPBMDIDC_01760 1.8e-195 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PPBMDIDC_01761 5.8e-222 L COG3547 Transposase and inactivated derivatives
PPBMDIDC_01762 8.5e-154 L COG2963 Transposase and inactivated derivatives
PPBMDIDC_01763 0.0 uup S ABC transporter, ATP-binding protein
PPBMDIDC_01764 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PPBMDIDC_01765 8.2e-182 scrR K helix_turn _helix lactose operon repressor
PPBMDIDC_01766 3.7e-295 scrB 3.2.1.26 GH32 G invertase
PPBMDIDC_01767 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PPBMDIDC_01768 2.3e-181 M CHAP domain
PPBMDIDC_01769 6.6e-74
PPBMDIDC_01770 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PPBMDIDC_01771 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PPBMDIDC_01772 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PPBMDIDC_01773 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PPBMDIDC_01774 4.5e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PPBMDIDC_01775 9.6e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PPBMDIDC_01776 9.6e-41 yajC U Preprotein translocase
PPBMDIDC_01777 5.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PPBMDIDC_01778 5.9e-216 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PPBMDIDC_01779 4.7e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PPBMDIDC_01780 2.6e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PPBMDIDC_01781 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PPBMDIDC_01782 2e-42 yrzL S Belongs to the UPF0297 family
PPBMDIDC_01783 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PPBMDIDC_01784 1.1e-50 yrzB S Belongs to the UPF0473 family
PPBMDIDC_01785 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PPBMDIDC_01786 3.5e-54 trxA O Belongs to the thioredoxin family
PPBMDIDC_01787 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PPBMDIDC_01788 1.1e-71 yslB S Protein of unknown function (DUF2507)
PPBMDIDC_01789 1.7e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PPBMDIDC_01790 1.4e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PPBMDIDC_01791 2.8e-146 ykuT M mechanosensitive ion channel
PPBMDIDC_01792 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PPBMDIDC_01793 5.1e-36
PPBMDIDC_01794 9.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PPBMDIDC_01795 4.9e-182 ccpA K catabolite control protein A
PPBMDIDC_01796 1.5e-266 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PPBMDIDC_01797 4.3e-55
PPBMDIDC_01798 3.1e-275 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PPBMDIDC_01799 1.7e-105 yutD S Protein of unknown function (DUF1027)
PPBMDIDC_01800 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PPBMDIDC_01801 3.7e-100 S Protein of unknown function (DUF1461)
PPBMDIDC_01802 8.8e-116 dedA S SNARE-like domain protein
PPBMDIDC_01803 8e-185 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PPBMDIDC_01804 9e-190 L Putative transposase DNA-binding domain
PPBMDIDC_01805 9.1e-139 L COG2826 Transposase and inactivated derivatives, IS30 family
PPBMDIDC_01834 1.2e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PPBMDIDC_01835 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
PPBMDIDC_01836 1.5e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PPBMDIDC_01837 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PPBMDIDC_01838 1.7e-29 secG U Preprotein translocase
PPBMDIDC_01839 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PPBMDIDC_01840 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PPBMDIDC_01842 5.6e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PPBMDIDC_01843 6.2e-127 manY G PTS system
PPBMDIDC_01844 1.3e-173 manN G system, mannose fructose sorbose family IID component
PPBMDIDC_01845 9.9e-64 manO S Domain of unknown function (DUF956)
PPBMDIDC_01846 1.8e-159 K Transcriptional regulator
PPBMDIDC_01847 1.4e-90 maa S transferase hexapeptide repeat
PPBMDIDC_01848 4.3e-245 cycA E Amino acid permease
PPBMDIDC_01849 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PPBMDIDC_01850 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PPBMDIDC_01851 0.0 mtlR K Mga helix-turn-helix domain
PPBMDIDC_01852 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PPBMDIDC_01853 6e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPBMDIDC_01854 2.6e-219 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PPBMDIDC_01855 6.8e-133 4.1.1.44 S Carboxymuconolactone decarboxylase family
PPBMDIDC_01856 4.7e-32
PPBMDIDC_01857 1.2e-70 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PPBMDIDC_01858 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PPBMDIDC_01859 0.0 S TerB-C domain
PPBMDIDC_01860 1.2e-252 P P-loop Domain of unknown function (DUF2791)
PPBMDIDC_01861 0.0 lhr L DEAD DEAH box helicase
PPBMDIDC_01862 1.9e-59
PPBMDIDC_01863 1.4e-141 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PPBMDIDC_01865 1e-61 psiE S Phosphate-starvation-inducible E
PPBMDIDC_01866 3.8e-113 yncA 2.3.1.79 S Maltose acetyltransferase
PPBMDIDC_01867 1.5e-70 S Iron-sulphur cluster biosynthesis
PPBMDIDC_01869 4.6e-31
PPBMDIDC_01870 3.6e-173 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PPBMDIDC_01871 6.2e-12
PPBMDIDC_01872 4.1e-118 L Resolvase, N-terminal
PPBMDIDC_01873 3.6e-254 L Putative transposase DNA-binding domain
PPBMDIDC_01874 5.2e-17 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPBMDIDC_01875 2.3e-53 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPBMDIDC_01876 3.4e-78 M LysM domain protein
PPBMDIDC_01877 1.5e-160 D nuclear chromosome segregation
PPBMDIDC_01878 1.2e-105 G Phosphoglycerate mutase family
PPBMDIDC_01879 5.4e-87 G Histidine phosphatase superfamily (branch 1)
PPBMDIDC_01880 2.4e-116 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PPBMDIDC_01881 6e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PPBMDIDC_01883 2e-219 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PPBMDIDC_01884 4.1e-181 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PPBMDIDC_01885 1.4e-119 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PPBMDIDC_01886 4.4e-144 K SIS domain
PPBMDIDC_01887 3.1e-225 slpX S SLAP domain
PPBMDIDC_01888 1.3e-22 3.6.4.12 S transposase or invertase
PPBMDIDC_01889 7.7e-12
PPBMDIDC_01890 1.1e-240 npr 1.11.1.1 C NADH oxidase
PPBMDIDC_01893 1.9e-300 oppA2 E ABC transporter, substratebinding protein
PPBMDIDC_01894 1.1e-179
PPBMDIDC_01895 4.6e-123 gntR1 K UTRA
PPBMDIDC_01896 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PPBMDIDC_01897 2.8e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PPBMDIDC_01898 2.6e-205 csaB M Glycosyl transferases group 1
PPBMDIDC_01899 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PPBMDIDC_01900 8.8e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PPBMDIDC_01901 0.0 pacL 3.6.3.8 P P-type ATPase
PPBMDIDC_01902 3.5e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PPBMDIDC_01903 1.1e-259 epsU S Polysaccharide biosynthesis protein
PPBMDIDC_01904 9.1e-135 M Glycosyltransferase sugar-binding region containing DXD motif
PPBMDIDC_01905 2.8e-84 ydcK S Belongs to the SprT family
PPBMDIDC_01907 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PPBMDIDC_01908 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PPBMDIDC_01909 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PPBMDIDC_01910 5.4e-201 camS S sex pheromone
PPBMDIDC_01911 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PPBMDIDC_01912 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PPBMDIDC_01913 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PPBMDIDC_01914 7.2e-172 yegS 2.7.1.107 G Lipid kinase
PPBMDIDC_01915 4.3e-108 ybhL S Belongs to the BI1 family
PPBMDIDC_01916 2.6e-57
PPBMDIDC_01917 2.4e-147 I transferase activity, transferring acyl groups other than amino-acyl groups
PPBMDIDC_01918 2.8e-244 nhaC C Na H antiporter NhaC
PPBMDIDC_01919 1.8e-105 pbpX V Beta-lactamase
PPBMDIDC_01920 1.8e-86 pbpX V Beta-lactamase
PPBMDIDC_01921 9e-256 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PPBMDIDC_01922 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
PPBMDIDC_01927 2.3e-260 emrY EGP Major facilitator Superfamily
PPBMDIDC_01928 2e-91 yxdD K Bacterial regulatory proteins, tetR family
PPBMDIDC_01929 0.0 4.2.1.53 S Myosin-crossreactive antigen
PPBMDIDC_01930 2.1e-34 S Domain of unknown function (DUF4417)
PPBMDIDC_01931 8.7e-18
PPBMDIDC_01932 1.9e-20
PPBMDIDC_01933 1.1e-14 K Helix-turn-helix XRE-family like proteins
PPBMDIDC_01934 4.8e-27 E Zn peptidase
PPBMDIDC_01935 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
PPBMDIDC_01936 4.9e-159 S reductase
PPBMDIDC_01937 9.3e-35
PPBMDIDC_01938 2.1e-35 K Putative DNA-binding domain
PPBMDIDC_01939 8.6e-84 K Putative DNA-binding domain
PPBMDIDC_01940 2.9e-238 pyrP F Permease
PPBMDIDC_01941 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PPBMDIDC_01942 4.5e-261 emrY EGP Major facilitator Superfamily
PPBMDIDC_01943 5.6e-217 mdtG EGP Major facilitator Superfamily
PPBMDIDC_01944 2.4e-136
PPBMDIDC_01945 3.5e-103
PPBMDIDC_01946 6e-210 pepA E M42 glutamyl aminopeptidase
PPBMDIDC_01947 7.6e-310 ybiT S ABC transporter, ATP-binding protein
PPBMDIDC_01948 2.9e-173 S Aldo keto reductase
PPBMDIDC_01949 6.1e-151
PPBMDIDC_01950 2.6e-239 steT E amino acid
PPBMDIDC_01951 1.3e-243 steT E amino acid
PPBMDIDC_01952 1.4e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
PPBMDIDC_01953 1.9e-147 glnH ET ABC transporter
PPBMDIDC_01954 1.4e-80 K Transcriptional regulator, MarR family
PPBMDIDC_01955 6.2e-310 XK27_09600 V ABC transporter, ATP-binding protein
PPBMDIDC_01956 0.0 V ABC transporter transmembrane region
PPBMDIDC_01957 3.8e-102 S ABC-type cobalt transport system, permease component
PPBMDIDC_01958 1.5e-253 G MFS/sugar transport protein
PPBMDIDC_01959 3.6e-114 udk 2.7.1.48 F Zeta toxin
PPBMDIDC_01960 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PPBMDIDC_01961 1.5e-149 glnH ET ABC transporter substrate-binding protein
PPBMDIDC_01962 9.7e-91 gluC P ABC transporter permease
PPBMDIDC_01963 4.7e-109 glnP P ABC transporter permease
PPBMDIDC_01964 2.9e-165 S Protein of unknown function (DUF2974)
PPBMDIDC_01965 5.8e-83
PPBMDIDC_01966 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
PPBMDIDC_01967 1.1e-234 G Bacterial extracellular solute-binding protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)